Query 047259
Match_columns 225
No_of_seqs 134 out of 1563
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 16:13:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 99.9 3.4E-26 1.2E-30 193.6 22.3 189 1-217 127-316 (322)
2 3sre_A PON1, serum paraoxonase 99.9 6.5E-25 2.2E-29 189.1 18.6 183 1-212 166-355 (355)
3 3dr2_A Exported gluconolactona 99.8 1.9E-19 6.4E-24 150.9 20.8 165 1-213 132-305 (305)
4 3g4e_A Regucalcin; six bladed 99.8 1.4E-19 4.8E-24 151.3 18.4 156 2-204 100-263 (297)
5 3e5z_A Putative gluconolactona 99.8 1.5E-17 5.1E-22 138.1 20.8 167 1-217 116-289 (296)
6 4hw6_A Hypothetical protein, I 99.8 1.3E-17 4.4E-22 147.3 20.4 160 1-213 229-432 (433)
7 3tc9_A Hypothetical hydrolase; 99.8 5.8E-17 2E-21 143.0 21.1 160 1-213 227-429 (430)
8 2p4o_A Hypothetical protein; p 99.8 8.5E-17 2.9E-21 135.1 19.8 145 1-204 118-279 (306)
9 3v64_C Agrin; beta propeller, 99.8 8.5E-17 2.9E-21 138.1 19.3 157 1-216 117-278 (349)
10 1ijq_A LDL receptor, low-densi 99.7 1.6E-16 5.6E-21 134.4 20.5 156 1-213 78-237 (316)
11 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.4E-16 4.8E-21 132.3 17.8 172 1-216 118-301 (314)
12 3sov_A LRP-6, low-density lipo 99.7 2.5E-16 8.6E-21 133.7 19.6 154 1-213 80-237 (318)
13 2ghs_A AGR_C_1268P; regucalcin 99.7 2.2E-16 7.4E-21 133.8 18.9 151 2-205 136-294 (326)
14 3v65_B Low-density lipoprotein 99.7 2.2E-16 7.4E-21 137.4 19.0 156 1-215 160-320 (386)
15 3p5b_L Low density lipoprotein 99.7 2.2E-16 7.4E-21 138.0 19.0 157 1-214 160-321 (400)
16 3hrp_A Uncharacterized protein 99.7 5.9E-16 2E-20 135.6 21.1 154 1-212 220-408 (409)
17 1npe_A Nidogen, entactin; glyc 99.7 6.3E-16 2.2E-20 126.9 19.6 154 1-214 80-238 (267)
18 1npe_A Nidogen, entactin; glyc 99.7 8.1E-16 2.8E-20 126.2 19.3 158 2-216 38-200 (267)
19 3fvz_A Peptidyl-glycine alpha- 99.7 1.3E-15 4.4E-20 128.9 20.6 174 2-213 26-226 (329)
20 3m0c_C LDL receptor, low-densi 99.7 6.4E-16 2.2E-20 145.5 20.5 155 1-212 472-630 (791)
21 3kya_A Putative phosphatase; s 99.7 8.5E-16 2.9E-20 137.3 19.4 164 1-217 248-478 (496)
22 3v64_C Agrin; beta propeller, 99.7 9.5E-16 3.3E-20 131.6 18.8 159 2-218 75-238 (349)
23 3v65_B Low-density lipoprotein 99.7 1.1E-15 3.7E-20 132.9 18.8 159 2-218 118-281 (386)
24 1ijq_A LDL receptor, low-densi 99.7 2.7E-15 9.1E-20 126.9 20.5 159 2-218 32-199 (316)
25 1q7f_A NHL, brain tumor CG1071 99.7 3.2E-15 1.1E-19 123.0 20.2 154 1-214 122-280 (286)
26 3fvz_A Peptidyl-glycine alpha- 99.7 7.5E-16 2.6E-20 130.3 16.6 189 1-216 92-324 (329)
27 2qe8_A Uncharacterized protein 99.7 5E-16 1.7E-20 132.4 14.0 154 1-207 121-314 (343)
28 1rwi_B Serine/threonine-protei 99.7 1.4E-15 4.7E-20 123.8 14.8 156 1-216 109-266 (270)
29 3sov_A LRP-6, low-density lipo 99.7 5.9E-15 2E-19 125.2 18.7 158 3-218 38-201 (318)
30 2dg1_A DRP35, lactonase; beta 99.7 1E-14 3.5E-19 122.4 19.5 167 2-216 137-318 (333)
31 3p5b_L Low density lipoprotein 99.7 6.8E-15 2.3E-19 128.5 18.7 159 2-218 114-281 (400)
32 3m0c_C LDL receptor, low-densi 99.6 1.1E-14 3.7E-19 137.2 20.3 160 2-219 426-594 (791)
33 1n7d_A LDL receptor, low-densi 99.6 2.5E-15 8.6E-20 140.0 15.1 155 2-213 455-613 (699)
34 2p4o_A Hypothetical protein; p 99.6 4.1E-14 1.4E-18 118.6 20.1 155 1-214 33-198 (306)
35 4a0p_A LRP6, LRP-6, low-densit 99.6 2.3E-14 8E-19 131.9 19.7 153 1-214 81-237 (628)
36 3s94_A LRP-6, low-density lipo 99.6 1.8E-14 6.3E-19 132.4 18.6 157 1-216 393-553 (619)
37 1rwi_B Serine/threonine-protei 99.6 4.3E-14 1.5E-18 114.9 18.8 157 1-218 68-226 (270)
38 1q7f_A NHL, brain tumor CG1071 99.6 5.9E-14 2E-18 115.4 19.6 156 1-215 31-195 (286)
39 3s94_A LRP-6, low-density lipo 99.6 4.2E-14 1.5E-18 130.0 20.6 160 2-219 42-207 (619)
40 2qc5_A Streptogramin B lactona 99.6 6.8E-14 2.3E-18 114.8 19.9 153 2-216 106-262 (300)
41 4hw6_A Hypothetical protein, I 99.6 3.1E-14 1.1E-18 125.6 18.5 155 1-216 140-306 (433)
42 3tc9_A Hypothetical hydrolase; 99.6 6.1E-14 2.1E-18 123.6 19.8 156 1-216 138-303 (430)
43 2qc5_A Streptogramin B lactona 99.6 6E-14 2.1E-18 115.1 17.9 149 1-213 147-299 (300)
44 4a0p_A LRP6, LRP-6, low-densit 99.6 6.8E-14 2.3E-18 128.8 19.8 158 2-218 39-201 (628)
45 2z2n_A Virginiamycin B lyase; 99.6 1.8E-13 6.2E-18 112.2 20.2 155 1-217 100-258 (299)
46 2z2n_A Virginiamycin B lyase; 99.6 1.2E-13 4.2E-18 113.2 18.3 152 1-215 142-296 (299)
47 2ism_A Putative oxidoreductase 99.6 4E-14 1.4E-18 121.6 15.8 159 1-206 32-225 (352)
48 2p9w_A MAL S 1 allergenic prot 99.6 5.2E-13 1.8E-17 113.1 19.8 159 1-214 14-215 (334)
49 3hrp_A Uncharacterized protein 99.5 6.1E-13 2.1E-17 116.4 20.1 159 1-216 132-300 (409)
50 3dsm_A Uncharacterized protein 99.5 7.6E-13 2.6E-17 112.0 19.0 160 2-216 86-255 (328)
51 3a9g_A Putative uncharacterize 99.5 2E-13 6.8E-18 117.4 15.5 164 1-211 30-228 (354)
52 3e5z_A Putative gluconolactona 99.5 7.2E-13 2.5E-17 109.6 17.8 167 1-213 29-201 (296)
53 2fp8_A Strictosidine synthase; 99.5 3.8E-13 1.3E-17 113.2 16.2 170 1-214 20-216 (322)
54 3das_A Putative oxidoreductase 99.5 6.2E-13 2.1E-17 114.0 17.2 166 1-210 33-231 (347)
55 3dsm_A Uncharacterized protein 99.5 4.6E-13 1.6E-17 113.3 15.2 135 1-178 173-310 (328)
56 1n7d_A LDL receptor, low-densi 99.5 5.5E-14 1.9E-18 130.9 9.7 159 2-218 408-575 (699)
57 3kya_A Putative phosphatase; s 99.5 6.3E-13 2.2E-17 118.7 15.4 168 2-216 188-412 (496)
58 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 4.5E-12 1.5E-16 104.9 18.7 165 1-213 19-206 (314)
59 3dr2_A Exported gluconolactona 99.5 2.7E-12 9.4E-17 107.1 17.4 166 1-214 46-224 (305)
60 2iwa_A Glutamine cyclotransfer 99.5 1.3E-11 4.4E-16 102.1 20.3 156 1-215 22-182 (266)
61 3g4e_A Regucalcin; six bladed 99.5 1.3E-11 4.3E-16 102.8 20.3 159 1-213 14-179 (297)
62 1cru_A Protein (soluble quinop 99.5 1.9E-12 6.4E-17 114.9 16.0 174 1-205 28-249 (454)
63 2dg1_A DRP35, lactonase; beta 99.4 8.5E-12 2.9E-16 104.5 18.8 158 1-214 46-213 (333)
64 2g8s_A Glucose/sorbosone dehyd 99.4 4.2E-12 1.4E-16 109.1 14.4 164 1-210 19-227 (353)
65 2qe8_A Uncharacterized protein 99.4 7.6E-12 2.6E-16 106.3 13.8 160 1-216 68-281 (343)
66 3hfq_A Uncharacterized protein 99.4 3E-11 1E-15 101.7 17.4 158 2-215 143-318 (347)
67 2ism_A Putative oxidoreductase 99.4 1.5E-11 5.1E-16 105.5 15.0 170 2-216 77-299 (352)
68 3mbr_X Glutamine cyclotransfer 99.4 2.2E-10 7.6E-15 93.3 21.1 155 1-215 22-180 (243)
69 3nol_A Glutamine cyclotransfer 99.4 8.8E-11 3E-15 96.5 18.8 155 1-215 44-202 (262)
70 3a9g_A Putative uncharacterize 99.3 5.3E-11 1.8E-15 102.3 17.4 172 1-214 136-352 (354)
71 3vgz_A Uncharacterized protein 99.3 5.8E-10 2E-14 93.2 23.1 157 2-215 91-263 (353)
72 3vgz_A Uncharacterized protein 99.3 1.3E-10 4.3E-15 97.3 18.5 153 2-215 143-304 (353)
73 2p9w_A MAL S 1 allergenic prot 99.3 5.2E-11 1.8E-15 100.9 15.1 146 2-203 139-304 (334)
74 3scy_A Hypothetical bacterial 99.3 2.2E-10 7.6E-15 97.0 18.8 160 2-216 157-339 (361)
75 2iwa_A Glutamine cyclotransfer 99.3 5.7E-11 1.9E-15 98.2 14.6 158 2-217 68-240 (266)
76 3nok_A Glutaminyl cyclase; bet 99.3 2.1E-10 7.3E-15 94.3 17.8 153 1-215 56-211 (268)
77 3hfq_A Uncharacterized protein 99.3 4.6E-10 1.6E-14 94.4 20.1 159 2-214 42-218 (347)
78 3sre_A PON1, serum paraoxonase 99.3 1.7E-10 5.9E-15 99.1 17.0 181 2-215 52-253 (355)
79 3mbr_X Glutamine cyclotransfer 99.2 3.8E-10 1.3E-14 91.9 15.7 163 2-222 67-243 (243)
80 3u4y_A Uncharacterized protein 99.2 2.3E-09 8E-14 89.1 20.9 163 2-218 130-308 (331)
81 3nol_A Glutamine cyclotransfer 99.2 8.3E-10 2.9E-14 90.7 16.4 155 2-214 89-256 (262)
82 3nok_A Glutaminyl cyclase; bet 99.2 8.8E-10 3E-14 90.7 15.3 154 2-213 98-265 (268)
83 3u4y_A Uncharacterized protein 99.2 1.6E-09 5.5E-14 90.1 17.1 158 2-215 85-253 (331)
84 1jof_A Carboxy-CIS,CIS-muconat 99.2 2.8E-09 9.7E-14 90.8 18.7 164 2-215 147-342 (365)
85 3no2_A Uncharacterized protein 99.1 3.3E-09 1.1E-13 87.7 17.4 150 2-213 39-194 (276)
86 2ghs_A AGR_C_1268P; regucalcin 99.1 4.6E-09 1.6E-13 88.5 18.4 152 2-213 51-209 (326)
87 3c75_H MADH, methylamine dehyd 99.1 2.1E-09 7.1E-14 94.6 16.3 148 9-212 82-246 (426)
88 1ri6_A Putative isomerase YBHE 99.1 6.1E-09 2.1E-13 86.3 17.6 162 2-214 86-262 (343)
89 3no2_A Uncharacterized protein 99.1 1.5E-08 5.2E-13 83.7 19.3 153 4-215 81-254 (276)
90 3das_A Putative oxidoreductase 99.1 8.6E-09 2.9E-13 88.2 18.2 163 2-216 82-294 (347)
91 3sjl_D Methylamine dehydrogena 99.1 3.6E-09 1.2E-13 91.8 15.6 124 7-180 40-180 (386)
92 1ri6_A Putative isomerase YBHE 99.1 3.7E-08 1.3E-12 81.5 20.6 158 2-214 40-209 (343)
93 1l0q_A Surface layer protein; 99.0 3E-08 1E-12 84.2 20.0 152 2-215 34-190 (391)
94 2mad_H Methylamine dehydrogena 99.0 2.5E-08 8.6E-13 86.0 19.0 130 39-212 48-194 (373)
95 2g8s_A Glucose/sorbosone dehyd 99.0 5.4E-09 1.9E-13 89.6 14.6 170 1-212 131-352 (353)
96 3qqz_A Putative uncharacterize 99.0 5.5E-08 1.9E-12 79.8 19.5 157 2-214 72-253 (255)
97 1jmx_B Amine dehydrogenase; ox 99.0 4.4E-08 1.5E-12 81.4 18.7 101 2-121 45-165 (349)
98 1jof_A Carboxy-CIS,CIS-muconat 99.0 2.3E-08 7.9E-13 85.1 16.9 139 37-213 120-290 (365)
99 1l0q_A Surface layer protein; 99.0 1.1E-07 3.7E-12 80.7 20.8 153 2-214 118-275 (391)
100 3c75_H MADH, methylamine dehyd 98.9 1.2E-08 4E-13 89.7 13.5 80 1-89 120-209 (426)
101 3scy_A Hypothetical bacterial 98.9 3.7E-08 1.3E-12 83.2 16.0 104 2-123 213-326 (361)
102 1qks_A Cytochrome CD1 nitrite 98.9 4.4E-08 1.5E-12 89.1 16.9 84 37-124 176-265 (567)
103 1nir_A Nitrite reductase; hemo 98.9 8.9E-08 3E-12 86.5 18.8 150 7-214 145-311 (543)
104 2mad_H Methylamine dehydrogena 98.9 2.3E-07 7.8E-12 80.0 20.3 78 4-90 70-157 (373)
105 1mda_H Methylamine dehydrogena 98.9 3.3E-08 1.1E-12 85.3 14.3 146 11-214 32-194 (368)
106 1nir_A Nitrite reductase; hemo 98.9 3.8E-07 1.3E-11 82.3 20.6 158 2-214 224-402 (543)
107 1jmx_B Amine dehydrogenase; ox 98.9 1.5E-07 5E-12 78.2 16.7 99 4-122 4-111 (349)
108 1pby_B Quinohemoprotein amine 98.8 1.4E-07 4.7E-12 77.9 15.9 98 2-120 36-152 (337)
109 3qqz_A Putative uncharacterize 98.8 5.6E-07 1.9E-11 73.7 19.1 162 3-218 30-208 (255)
110 3bws_A Protein LP49; two-domai 98.8 9.2E-07 3.2E-11 75.9 19.7 172 2-214 256-432 (433)
111 2ece_A 462AA long hypothetical 98.8 2.4E-07 8.3E-12 81.5 16.0 166 2-213 140-351 (462)
112 3bws_A Protein LP49; two-domai 98.8 7.5E-07 2.6E-11 76.5 19.0 157 4-215 174-335 (433)
113 3q6k_A 43.2 kDa salivary prote 98.7 8.8E-07 3E-11 76.5 18.5 146 1-203 153-343 (381)
114 3hxj_A Pyrrolo-quinoline quino 98.7 8.4E-07 2.9E-11 73.4 17.7 131 38-217 195-327 (330)
115 2oiz_A Aromatic amine dehydrog 98.7 1.8E-07 6.2E-12 79.9 13.4 99 10-123 14-128 (361)
116 1pby_B Quinohemoprotein amine 98.7 1.3E-06 4.3E-11 72.0 17.7 144 37-215 10-164 (337)
117 1qks_A Cytochrome CD1 nitrite 98.7 2.1E-06 7E-11 78.1 19.2 70 2-89 199-275 (567)
118 3hxj_A Pyrrolo-quinoline quino 98.7 2.7E-06 9.2E-11 70.3 18.5 128 37-214 156-284 (330)
119 3sjl_D Methylamine dehydrogena 98.6 4E-07 1.4E-11 78.9 12.6 79 2-89 81-169 (386)
120 3s25_A Hypothetical 7-bladed b 98.6 1.1E-06 3.7E-11 73.7 14.4 130 37-218 166-297 (302)
121 4a9v_A PHOX; hydrolase, beta-p 98.6 1.2E-07 4.2E-12 85.4 8.7 72 1-78 477-551 (592)
122 2ece_A 462AA long hypothetical 98.6 3.5E-06 1.2E-10 74.2 17.4 121 2-123 190-341 (462)
123 1fwx_A Nitrous oxide reductase 98.6 7.9E-07 2.7E-11 80.7 13.4 123 2-124 197-351 (595)
124 2wg3_C Hedgehog-interacting pr 98.5 9E-07 3.1E-11 78.6 12.3 105 2-124 16-159 (463)
125 3o4h_A Acylamino-acid-releasin 98.5 1.6E-06 5.5E-11 78.0 12.9 82 38-123 175-265 (582)
126 2hqs_A Protein TOLB; TOLB, PAL 98.5 1.3E-05 4.5E-10 69.5 18.0 101 3-122 226-329 (415)
127 1cru_A Protein (soluble quinop 98.4 3.5E-06 1.2E-10 74.5 14.2 71 49-123 18-100 (454)
128 3amr_A 3-phytase; beta-propell 98.4 7E-06 2.4E-10 70.0 15.3 137 39-215 102-264 (355)
129 3v9f_A Two-component system se 98.4 1.2E-05 4.1E-10 75.2 18.4 149 4-214 411-568 (781)
130 3v9f_A Two-component system se 98.4 5E-06 1.7E-10 77.8 15.5 150 3-215 498-657 (781)
131 2oiz_A Aromatic amine dehydrog 98.4 2.1E-06 7.4E-11 73.2 11.6 100 5-116 259-360 (361)
132 3s25_A Hypothetical 7-bladed b 98.4 7.1E-06 2.4E-10 68.7 14.3 133 37-221 128-262 (302)
133 1fwx_A Nitrous oxide reductase 98.4 2.9E-06 9.8E-11 77.0 12.5 174 10-215 100-309 (595)
134 4a2l_A BT_4663, two-component 98.3 2.4E-05 8.3E-10 73.2 16.1 145 4-214 456-614 (795)
135 3azo_A Aminopeptidase; POP fam 98.3 5.4E-05 1.8E-09 68.8 18.0 159 3-214 191-369 (662)
136 2hqs_A Protein TOLB; TOLB, PAL 98.2 6.4E-05 2.2E-09 65.1 17.3 80 37-120 202-283 (415)
137 2ojh_A Uncharacterized protein 98.2 0.0001 3.5E-09 58.8 16.8 79 36-119 108-188 (297)
138 4a2l_A BT_4663, two-component 98.2 3.1E-05 1.1E-09 72.5 15.5 144 3-213 501-658 (795)
139 2z3z_A Dipeptidyl aminopeptida 98.2 0.0001 3.6E-09 67.5 18.2 140 36-215 233-392 (706)
140 3ow8_A WD repeat-containing pr 98.2 0.0002 6.9E-09 59.5 18.4 132 37-212 185-319 (321)
141 3azo_A Aminopeptidase; POP fam 98.2 2.6E-05 9E-10 70.9 13.9 113 3-123 133-261 (662)
142 2ymu_A WD-40 repeat protein; u 98.2 0.00015 5.1E-09 64.4 18.5 133 37-214 406-539 (577)
143 1gxr_A ESG1, transducin-like e 98.2 0.00028 9.4E-09 57.6 18.5 130 37-212 204-335 (337)
144 2gop_A Trilobed protease; beta 98.1 0.00021 7.1E-09 59.3 17.2 77 37-121 84-187 (347)
145 2ojh_A Uncharacterized protein 98.1 0.00021 7.2E-09 56.9 16.5 94 3-119 45-144 (297)
146 2ymu_A WD-40 repeat protein; u 98.1 0.00029 9.9E-09 62.5 18.5 127 37-208 447-574 (577)
147 3pe7_A Oligogalacturonate lyas 98.1 0.00028 9.5E-09 59.3 17.5 101 3-122 39-143 (388)
148 4ery_A WD repeat-containing pr 98.1 0.00045 1.6E-08 56.4 18.3 141 36-215 127-269 (312)
149 2wg3_C Hedgehog-interacting pr 98.1 0.00014 4.8E-09 64.4 15.8 74 3-77 142-242 (463)
150 4a9v_A PHOX; hydrolase, beta-p 98.1 5.4E-05 1.8E-09 68.4 13.0 118 58-203 384-551 (592)
151 1gxr_A ESG1, transducin-like e 98.1 0.00052 1.8E-08 55.9 18.1 82 37-123 162-244 (337)
152 3ow8_A WD repeat-containing pr 98.0 0.0011 3.6E-08 55.1 20.1 83 37-123 143-226 (321)
153 1sq9_A Antiviral protein SKI8; 98.0 0.00074 2.5E-08 56.7 19.2 156 2-214 189-395 (397)
154 2ecf_A Dipeptidyl peptidase IV 98.0 0.00022 7.4E-09 65.6 16.9 104 2-120 39-168 (741)
155 2pm9_A Protein WEB1, protein t 98.0 0.00038 1.3E-08 58.8 17.0 158 3-218 169-341 (416)
156 4ery_A WD repeat-containing pr 98.0 0.0009 3.1E-08 54.6 18.6 100 3-123 27-127 (312)
157 3zwl_B Eukaryotic translation 98.0 0.0011 3.6E-08 54.7 18.8 137 37-214 95-249 (369)
158 2xdw_A Prolyl endopeptidase; a 98.0 0.00077 2.6E-08 62.2 19.4 145 38-216 151-322 (710)
159 3pe7_A Oligogalacturonate lyas 98.0 9E-05 3.1E-09 62.4 12.1 169 3-216 191-386 (388)
160 2z3z_A Dipeptidyl aminopeptida 97.9 0.0009 3.1E-08 61.2 19.1 97 3-120 85-197 (706)
161 2ecf_A Dipeptidyl peptidase IV 97.9 0.00036 1.2E-08 64.1 16.4 135 38-215 263-416 (741)
162 2aq5_A Coronin-1A; WD40 repeat 97.9 0.00084 2.9E-08 57.0 17.2 139 37-216 103-256 (402)
163 2aq5_A Coronin-1A; WD40 repeat 97.9 0.0019 6.6E-08 54.8 19.2 141 37-216 153-301 (402)
164 4gqb_B Methylosome protein 50; 97.8 0.00088 3E-08 56.4 16.2 85 37-123 148-235 (344)
165 3zwu_A Alkaline phosphatase PH 97.8 0.00035 1.2E-08 63.6 14.3 119 56-201 382-549 (592)
166 3ei3_B DNA damage-binding prot 97.8 0.001 3.4E-08 55.9 16.5 151 3-214 77-236 (383)
167 1mda_H Methylamine dehydrogena 97.8 7.8E-05 2.7E-09 64.1 9.3 93 5-114 269-367 (368)
168 1k8k_C P40, ARP2/3 complex 41 97.8 0.0032 1.1E-07 52.0 18.8 101 3-123 12-116 (372)
169 3ott_A Two-component system se 97.8 0.00044 1.5E-08 64.3 14.6 145 3-214 475-626 (758)
170 2vdu_B TRNA (guanine-N(7)-)-me 97.8 0.00068 2.3E-08 58.7 14.8 102 3-123 106-218 (450)
171 3q6k_A 43.2 kDa salivary prote 97.8 0.0028 9.5E-08 54.6 18.0 86 2-89 89-190 (381)
172 1k8k_C P40, ARP2/3 complex 41 97.7 0.0011 3.6E-08 55.0 14.8 86 37-123 73-162 (372)
173 3vl1_A 26S proteasome regulato 97.7 0.0036 1.2E-07 52.9 18.3 84 36-123 117-201 (420)
174 1vyh_C Platelet-activating fac 97.7 0.0018 6E-08 55.6 16.5 150 4-214 113-265 (410)
175 3zwl_B Eukaryotic translation 97.7 0.0042 1.4E-07 51.0 18.3 148 37-215 196-347 (369)
176 1r5m_A SIR4-interacting protei 97.7 0.00084 2.9E-08 56.5 14.2 82 37-123 268-350 (425)
177 3vl1_A 26S proteasome regulato 97.7 0.002 6.8E-08 54.5 16.4 136 37-214 202-365 (420)
178 1got_B GT-beta; complex (GTP-b 97.7 0.0027 9.1E-08 52.8 16.9 130 37-209 205-338 (340)
179 3o4h_A Acylamino-acid-releasin 97.7 0.00023 7.8E-09 63.9 10.8 73 41-119 135-210 (582)
180 4h5i_A Guanine nucleotide-exch 97.7 0.0047 1.6E-07 52.2 18.3 157 3-217 180-346 (365)
181 2ynn_A Coatomer subunit beta'; 97.7 0.0059 2E-07 49.9 18.4 100 3-123 17-117 (304)
182 2xyi_A Probable histone-bindin 97.7 0.0011 3.9E-08 57.1 14.7 85 37-123 253-342 (430)
183 1erj_A Transcriptional repress 97.7 0.0043 1.5E-07 52.7 18.0 99 3-123 127-227 (393)
184 3iuj_A Prolyl endopeptidase; h 97.6 0.0089 3E-07 55.0 20.7 142 37-216 154-316 (693)
185 4g56_B MGC81050 protein; prote 97.6 0.0011 3.8E-08 55.8 13.5 84 37-121 160-245 (357)
186 2xyi_A Probable histone-bindin 97.6 0.0034 1.2E-07 54.0 16.6 137 37-214 203-353 (430)
187 2vdu_B TRNA (guanine-N(7)-)-me 97.6 0.0015 5E-08 56.6 14.2 83 37-123 170-260 (450)
188 1pgu_A Actin interacting prote 97.6 0.0065 2.2E-07 53.8 18.7 137 37-214 182-328 (615)
189 3ei3_B DNA damage-binding prot 97.6 0.0069 2.4E-07 50.7 18.0 83 36-123 139-225 (383)
190 1got_B GT-beta; complex (GTP-b 97.6 0.0086 2.9E-07 49.7 18.4 85 35-123 161-246 (340)
191 1erj_A Transcriptional repress 97.6 0.012 4.2E-07 49.8 19.5 60 60-123 126-185 (393)
192 3amr_A 3-phytase; beta-propell 97.6 0.007 2.4E-07 51.5 17.5 139 35-215 47-211 (355)
193 4aez_A CDC20, WD repeat-contai 97.6 0.0063 2.1E-07 51.6 17.5 138 37-216 238-382 (401)
194 2bkl_A Prolyl endopeptidase; m 97.6 0.0027 9.2E-08 58.4 16.1 141 37-216 146-306 (695)
195 3c5m_A Oligogalacturonate lyas 97.6 0.0012 4.2E-08 55.2 12.7 79 38-122 216-301 (396)
196 1xfd_A DIP, dipeptidyl aminope 97.5 0.00083 2.8E-08 61.5 12.2 95 2-117 19-127 (723)
197 3mkq_A Coatomer beta'-subunit; 97.5 0.0083 2.9E-07 55.3 18.9 152 3-215 17-173 (814)
198 3ott_A Two-component system se 97.5 0.0058 2E-07 56.7 17.8 94 4-121 150-249 (758)
199 4h5i_A Guanine nucleotide-exch 97.5 0.0026 8.9E-08 53.7 14.0 100 4-123 138-239 (365)
200 1pgu_A Actin interacting prote 97.4 0.0067 2.3E-07 53.7 16.7 155 3-214 120-283 (615)
201 2xzm_R RACK1; ribosome, transl 97.4 0.027 9.2E-07 46.6 19.5 52 37-89 97-149 (343)
202 1tl2_A L10, protein (tachylect 97.4 0.00066 2.3E-08 54.2 8.8 96 3-121 44-152 (236)
203 4g56_B MGC81050 protein; prote 97.4 0.0019 6.7E-08 54.3 12.4 138 37-218 203-347 (357)
204 2pm9_A Protein WEB1, protein t 97.4 0.0038 1.3E-07 52.6 14.2 142 37-215 88-250 (416)
205 1r5m_A SIR4-interacting protei 97.4 0.0093 3.2E-07 49.9 16.5 132 37-214 170-319 (425)
206 4gqb_B Methylosome protein 50; 97.4 0.0078 2.7E-07 50.5 16.0 137 37-217 191-334 (344)
207 3dwl_C Actin-related protein 2 97.4 0.0006 2E-08 57.0 8.6 86 37-123 76-166 (377)
208 1sq9_A Antiviral protein SKI8; 97.4 0.004 1.4E-07 52.1 13.8 121 57-215 186-323 (397)
209 1yr2_A Prolyl oligopeptidase; 97.4 0.011 3.8E-07 54.7 17.9 140 38-214 189-350 (741)
210 3mmy_A MRNA export factor; mRN 97.4 0.021 7.2E-07 46.7 18.0 132 37-215 63-200 (368)
211 2xdw_A Prolyl endopeptidase; a 97.4 0.01 3.4E-07 54.7 17.5 141 37-216 258-416 (710)
212 3fm0_A Protein CIAO1; WDR39,SG 97.4 0.0085 2.9E-07 49.9 15.4 85 37-123 82-170 (345)
213 2pbi_B Guanine nucleotide-bind 97.3 0.028 9.7E-07 46.9 18.1 102 3-123 68-174 (354)
214 3odt_A Protein DOA1; ubiquitin 97.3 0.02 6.8E-07 45.8 16.6 133 36-216 163-298 (313)
215 2oit_A Nucleoporin 214KDA; NH2 97.3 0.003 1E-07 55.0 12.2 83 57-179 149-232 (434)
216 2ynn_A Coatomer subunit beta'; 97.3 0.015 5.2E-07 47.4 15.9 85 36-123 75-161 (304)
217 3iz6_a 40S ribosomal protein R 97.3 0.038 1.3E-06 46.5 18.8 140 36-215 226-376 (380)
218 1vyh_C Platelet-activating fac 97.3 0.034 1.2E-06 47.4 18.6 52 37-89 213-265 (410)
219 3i2n_A WD repeat-containing pr 97.3 0.0083 2.9E-07 49.1 14.2 86 37-123 189-280 (357)
220 1xfd_A DIP, dipeptidyl aminope 97.3 0.0067 2.3E-07 55.4 14.8 39 38-76 134-191 (723)
221 3iuj_A Prolyl endopeptidase; h 97.2 0.01 3.5E-07 54.7 15.9 138 37-215 258-406 (693)
222 3fm0_A Protein CIAO1; WDR39,SG 97.2 0.0053 1.8E-07 51.2 12.9 101 4-123 21-125 (345)
223 2gop_A Trilobed protease; beta 97.2 0.017 5.9E-07 47.4 15.6 100 3-123 174-281 (347)
224 1z68_A Fibroblast activation p 97.2 0.006 2.1E-07 55.8 13.8 91 4-116 20-122 (719)
225 3mkq_A Coatomer beta'-subunit; 97.2 0.028 9.5E-07 51.8 18.3 84 37-123 118-206 (814)
226 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.032 1.1E-06 46.8 17.2 126 36-211 247-375 (376)
227 3frx_A Guanine nucleotide-bind 97.2 0.061 2.1E-06 44.1 18.5 52 37-89 86-138 (319)
228 3lrv_A PRE-mRNA-splicing facto 97.1 0.009 3.1E-07 49.5 13.3 85 37-123 148-234 (343)
229 4aez_A CDC20, WD repeat-contai 97.1 0.02 7E-07 48.4 15.6 87 36-123 282-369 (401)
230 3odt_A Protein DOA1; ubiquitin 97.1 0.037 1.3E-06 44.2 16.5 83 37-123 38-122 (313)
231 3dwl_C Actin-related protein 2 97.1 0.0029 1E-07 52.7 10.1 86 37-123 121-225 (377)
232 3dw8_B Serine/threonine-protei 97.1 0.047 1.6E-06 46.3 17.8 67 4-88 33-125 (447)
233 3k26_A Polycomb protein EED; W 97.1 0.0041 1.4E-07 51.1 10.7 84 37-123 94-181 (366)
234 4e54_B DNA damage-binding prot 97.1 0.0087 3E-07 51.4 13.1 84 36-123 140-229 (435)
235 2xe4_A Oligopeptidase B; hydro 97.1 0.026 8.8E-07 52.6 17.1 99 4-117 178-284 (751)
236 3frx_A Guanine nucleotide-bind 97.1 0.044 1.5E-06 45.0 16.9 84 37-123 128-216 (319)
237 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.042 1.4E-06 46.0 16.9 132 37-214 62-207 (376)
238 1yr2_A Prolyl oligopeptidase; 97.1 0.012 4E-07 54.6 14.5 106 37-179 293-404 (741)
239 1yfq_A Cell cycle arrest prote 97.1 0.0077 2.6E-07 49.2 11.9 99 3-123 15-120 (342)
240 2pbi_B Guanine nucleotide-bind 97.1 0.068 2.3E-06 44.6 18.0 84 36-123 174-260 (354)
241 3c5m_A Oligogalacturonate lyas 97.0 0.023 7.9E-07 47.3 14.8 85 35-122 165-257 (396)
242 1nr0_A Actin interacting prote 97.0 0.057 1.9E-06 48.7 18.2 84 37-123 169-259 (611)
243 3dm0_A Maltose-binding peripla 97.0 0.017 5.7E-07 52.9 14.8 53 36-89 450-503 (694)
244 1kb0_A Quinohemoprotein alcoho 97.0 0.067 2.3E-06 49.3 18.9 52 160-213 497-566 (677)
245 3jrp_A Fusion protein of prote 97.0 0.11 3.6E-06 42.6 18.6 85 37-123 78-180 (379)
246 3lrv_A PRE-mRNA-splicing facto 97.0 0.083 2.8E-06 43.5 17.9 84 36-123 190-280 (343)
247 3gre_A Serine/threonine-protei 97.0 0.035 1.2E-06 47.2 15.9 141 37-216 191-361 (437)
248 3sfz_A APAF-1, apoptotic pepti 97.0 0.038 1.3E-06 53.7 17.6 99 4-123 620-721 (1249)
249 1k32_A Tricorn protease; prote 97.0 0.0098 3.4E-07 57.2 13.3 81 37-123 316-398 (1045)
250 4a11_B DNA excision repair pro 97.0 0.017 5.7E-07 48.1 13.3 152 3-215 47-219 (408)
251 3k26_A Polycomb protein EED; W 96.9 0.038 1.3E-06 45.1 15.2 138 37-215 43-193 (366)
252 3i2n_A WD repeat-containing pr 96.9 0.042 1.4E-06 44.8 15.3 105 3-123 22-137 (357)
253 4a11_B DNA excision repair pro 96.9 0.047 1.6E-06 45.3 15.8 88 35-123 163-265 (408)
254 1k32_A Tricorn protease; prote 96.9 0.03 1E-06 53.9 16.2 81 37-121 357-438 (1045)
255 1nr0_A Actin interacting prote 96.9 0.051 1.8E-06 48.9 16.8 52 37-89 211-270 (611)
256 3jrp_A Fusion protein of prote 96.9 0.1 3.6E-06 42.7 17.4 85 37-123 124-229 (379)
257 3dw8_B Serine/threonine-protei 96.9 0.056 1.9E-06 45.8 16.0 102 3-123 181-305 (447)
258 1w6s_A Methanol dehydrogenase 96.8 0.15 5.3E-06 46.3 19.3 62 160-223 493-591 (599)
259 3sfz_A APAF-1, apoptotic pepti 96.8 0.054 1.8E-06 52.6 17.3 83 37-123 764-860 (1249)
260 4a5s_A Dipeptidyl peptidase 4 96.8 0.1 3.6E-06 48.1 18.5 146 36-217 226-403 (740)
261 3iz6_a 40S ribosomal protein R 96.8 0.023 7.8E-07 47.9 12.9 84 37-123 270-364 (380)
262 2bkl_A Prolyl endopeptidase; m 96.7 0.021 7.3E-07 52.4 12.5 106 37-179 251-360 (695)
263 3zwu_A Alkaline phosphatase PH 96.6 0.0061 2.1E-07 55.4 8.5 70 2-76 478-549 (592)
264 4e54_B DNA damage-binding prot 96.6 0.0091 3.1E-07 51.3 9.3 87 35-123 228-316 (435)
265 2hes_X YDR267CP; beta-propelle 96.6 0.14 4.9E-06 42.0 16.2 64 58-123 108-173 (330)
266 4a5s_A Dipeptidyl peptidase 4 96.6 0.08 2.7E-06 48.9 15.9 68 4-90 21-102 (740)
267 1yfq_A Cell cycle arrest prote 96.6 0.065 2.2E-06 43.5 13.8 80 37-121 78-167 (342)
268 2ad6_A Methanol dehydrogenase 96.5 0.13 4.4E-06 46.4 16.7 42 160-203 484-526 (571)
269 3jro_A Fusion protein of prote 96.5 0.076 2.6E-06 49.3 15.5 75 37-113 76-155 (753)
270 3dm0_A Maltose-binding peripla 96.5 0.21 7.1E-06 45.5 18.2 83 37-123 404-492 (694)
271 3vu4_A KMHSV2; beta-propeller 96.5 0.11 3.7E-06 43.3 14.8 87 34-123 155-260 (355)
272 3v7d_B Cell division control p 96.4 0.2 6.8E-06 42.8 16.6 124 36-206 330-455 (464)
273 2xzm_R RACK1; ribosome, transl 96.4 0.31 1.1E-05 40.0 17.9 63 57-123 76-138 (343)
274 3vu4_A KMHSV2; beta-propeller 96.4 0.071 2.4E-06 44.5 13.1 69 3-89 199-271 (355)
275 2hes_X YDR267CP; beta-propelle 96.3 0.12 4.2E-06 42.4 14.3 83 37-121 128-217 (330)
276 4aow_A Guanine nucleotide-bind 96.3 0.32 1.1E-05 39.1 16.9 83 36-123 193-276 (340)
277 2j04_A TAU60, YPL007P, hypothe 96.3 0.12 4.1E-06 46.8 14.7 116 57-216 85-213 (588)
278 1flg_A Protein (quinoprotein e 96.3 0.32 1.1E-05 43.9 17.7 41 160-202 506-547 (582)
279 2oaj_A Protein SNI1; WD40 repe 96.3 0.38 1.3E-05 45.7 18.9 98 3-123 21-118 (902)
280 3mmy_A MRNA export factor; mRN 96.2 0.21 7.2E-06 40.5 14.9 52 37-89 107-160 (368)
281 3gre_A Serine/threonine-protei 96.2 0.13 4.5E-06 43.5 14.0 68 3-88 67-141 (437)
282 3jro_A Fusion protein of prote 96.2 0.067 2.3E-06 49.6 12.9 102 3-123 13-121 (753)
283 1z68_A Fibroblast activation p 96.1 0.055 1.9E-06 49.4 11.9 140 36-214 222-393 (719)
284 3f3f_A Nucleoporin SEH1; struc 96.1 0.15 5.2E-06 40.8 13.3 102 3-123 15-132 (351)
285 1yiq_A Quinohemoprotein alcoho 96.0 0.36 1.2E-05 44.4 17.0 55 160-216 495-571 (689)
286 3v7d_B Cell division control p 96.0 0.63 2.2E-05 39.6 19.6 82 36-123 288-370 (464)
287 1kv9_A Type II quinohemoprotei 95.9 0.48 1.6E-05 43.5 17.4 53 160-214 478-552 (668)
288 3f3f_A Nucleoporin SEH1; struc 95.9 0.52 1.8E-05 37.6 18.9 141 37-215 80-250 (351)
289 4gga_A P55CDC, cell division c 95.8 0.72 2.5E-05 39.0 19.2 52 37-89 124-178 (420)
290 4aow_A Guanine nucleotide-bind 95.8 0.58 2E-05 37.6 17.6 62 57-122 86-147 (340)
291 2j04_A TAU60, YPL007P, hypothe 95.8 0.14 4.8E-06 46.4 12.6 76 37-115 106-194 (588)
292 2pm7_B Protein transport prote 95.7 0.62 2.1E-05 37.4 16.4 102 3-123 13-121 (297)
293 2oaj_A Protein SNI1; WD40 repe 95.2 0.65 2.2E-05 44.1 16.0 85 36-121 77-170 (902)
294 4gga_A P55CDC, cell division c 95.2 1.3 4.3E-05 37.4 16.5 115 58-214 277-395 (420)
295 2pm7_B Protein transport prote 95.1 1 3.5E-05 36.0 17.0 53 36-89 75-132 (297)
296 4ggc_A P55CDC, cell division c 95.0 1 3.5E-05 35.7 18.6 52 37-89 44-98 (318)
297 2hz6_A Endoplasmic reticulum t 94.8 0.034 1.2E-06 47.1 5.2 51 37-89 18-68 (369)
298 2oit_A Nucleoporin 214KDA; NH2 94.8 0.28 9.6E-06 42.3 11.2 65 59-123 94-170 (434)
299 2xe4_A Oligopeptidase B; hydro 94.7 1 3.6E-05 41.7 15.5 52 38-89 247-304 (751)
300 1tl2_A L10, protein (tachylect 94.5 0.43 1.5E-05 38.0 10.6 96 4-121 92-199 (236)
301 3bg1_A Protein SEC13 homolog; 94.4 0.35 1.2E-05 39.4 10.5 101 3-122 17-124 (316)
302 2ad6_A Methanol dehydrogenase 94.4 2.7 9.1E-05 37.7 19.9 51 160-214 443-494 (571)
303 1p22_A F-BOX/WD-repeat protein 94.0 2.5 8.5E-05 35.7 19.5 52 35-89 190-242 (435)
304 2j04_B YDR362CP, TAU91; beta p 93.7 1.1 3.8E-05 39.8 13.0 88 34-123 283-375 (524)
305 3bg1_A Protein SEC13 homolog; 93.7 1.2 3.9E-05 36.1 12.2 66 57-123 212-282 (316)
306 1kb0_A Quinohemoprotein alcoho 93.6 4.2 0.00014 37.2 20.1 52 160-215 456-508 (677)
307 2ovr_B FBW7, F-BOX/WD repeat p 93.4 3.1 0.00011 35.1 16.4 134 36-215 257-392 (445)
308 1k3i_A Galactose oxidase precu 93.4 1 3.6E-05 40.9 12.5 136 42-215 170-324 (656)
309 3sbq_A Nitrous-oxide reductase 93.4 0.34 1.2E-05 43.8 8.7 87 39-125 299-399 (638)
310 4ggc_A P55CDC, cell division c 93.0 2.7 9.3E-05 33.1 16.0 136 37-214 171-315 (318)
311 2j04_B YDR362CP, TAU91; beta p 92.6 0.78 2.7E-05 40.8 10.1 52 37-89 376-428 (524)
312 2w18_A PALB2, fancn, partner a 92.2 4.7 0.00016 34.1 15.1 38 35-72 200-241 (356)
313 4asc_A Kelch repeat and BTB do 91.2 5 0.00017 32.3 13.5 140 36-215 115-278 (315)
314 1yiq_A Quinohemoprotein alcoho 91.0 1.7 5.9E-05 39.9 10.9 82 37-123 454-537 (689)
315 1p22_A F-BOX/WD-repeat protein 90.7 6.8 0.00023 32.9 16.5 50 37-89 152-202 (435)
316 2ovr_B FBW7, F-BOX/WD repeat p 90.5 7 0.00024 32.8 18.8 139 35-216 296-444 (445)
317 2woz_A Kelch repeat and BTB do 90.1 6.4 0.00022 31.7 14.7 139 37-215 126-288 (318)
318 3s9j_A Member of DUF4221 famil 89.8 4.9 0.00017 34.1 11.9 117 66-218 36-178 (369)
319 3ii7_A Kelch-like protein 7; p 89.3 7.1 0.00024 31.1 15.0 145 36-216 68-227 (306)
320 4asc_A Kelch repeat and BTB do 88.5 6.6 0.00022 31.6 11.5 138 38-215 67-222 (315)
321 2xbg_A YCF48-like protein; pho 87.0 11 0.00038 30.7 14.6 81 38-122 142-223 (327)
322 3ii7_A Kelch-like protein 7; p 86.5 11 0.00037 30.0 16.0 139 37-215 117-273 (306)
323 2vpj_A Kelch-like protein 12; 85.9 11 0.00039 29.7 17.6 139 37-215 127-279 (301)
324 1kv9_A Type II quinohemoprotei 85.8 20 0.0007 32.5 21.3 53 35-89 124-187 (668)
325 4gq1_A NUP37; propeller, trans 84.8 1.8 6E-05 36.3 6.3 53 37-89 165-218 (393)
326 1zgk_A Kelch-like ECH-associat 84.5 14 0.00048 29.5 13.4 139 37-216 89-242 (308)
327 2woz_A Kelch repeat and BTB do 83.3 16 0.00055 29.3 11.6 139 38-215 78-232 (318)
328 3b7f_A Glycosyl hydrolase, BNR 83.0 15 0.00052 30.6 11.4 58 61-122 180-252 (394)
329 2vpj_A Kelch-like protein 12; 82.2 17 0.00057 28.7 17.0 142 37-215 30-185 (301)
330 1zgk_A Kelch-like ECH-associat 81.5 18 0.00063 28.8 13.0 139 37-215 38-194 (308)
331 1flg_A Protein (quinoprotein e 80.3 11 0.00038 33.7 10.0 84 36-124 464-549 (582)
332 2zwa_A Leucine carboxyl methyl 79.2 27 0.00092 31.9 12.4 84 39-123 514-616 (695)
333 2xn4_A Kelch-like protein 2; s 78.1 23 0.0008 27.9 15.0 142 37-218 123-280 (302)
334 1w6s_A Methanol dehydrogenase 78.0 39 0.0013 30.4 19.1 52 36-89 129-191 (599)
335 2xn4_A Kelch-like protein 2; s 76.9 25 0.00087 27.7 16.1 139 37-215 29-183 (302)
336 2hz6_A Endoplasmic reticulum t 76.8 7.3 0.00025 32.4 7.3 50 36-89 100-149 (369)
337 4gq1_A NUP37; propeller, trans 76.4 6.4 0.00022 32.8 6.9 53 35-89 336-389 (393)
338 1k3i_A Galactose oxidase precu 75.7 19 0.00066 32.4 10.3 107 3-122 189-305 (656)
339 3sbq_A Nitrous-oxide reductase 74.3 49 0.0017 30.0 12.0 107 1-124 324-455 (638)
340 2be1_A Serine/threonine-protei 74.1 17 0.0006 30.3 8.9 52 37-89 19-76 (339)
341 3b7f_A Glycosyl hydrolase, BNR 72.2 41 0.0014 27.8 15.4 25 62-87 119-145 (394)
342 2w18_A PALB2, fancn, partner a 71.4 15 0.00053 30.9 7.9 51 36-87 303-355 (356)
343 2xbg_A YCF48-like protein; pho 69.4 43 0.0015 27.0 13.4 57 60-121 124-180 (327)
344 2uvk_A YJHT; unknown function, 67.7 47 0.0016 26.8 16.6 80 38-123 31-127 (357)
345 1xip_A Nucleoporin NUP159; bet 64.4 41 0.0014 28.5 9.2 26 60-89 90-115 (388)
346 2zwa_A Leucine carboxyl methyl 59.0 1.1E+02 0.0036 27.9 16.4 139 37-216 411-579 (695)
347 1xip_A Nucleoporin NUP159; bet 55.1 38 0.0013 28.7 7.4 83 35-123 143-233 (388)
348 2cn3_A Xyloglucanase, beta-1,4 51.7 1.4E+02 0.0049 27.2 12.1 57 3-77 26-92 (737)
349 2uvk_A YJHT; unknown function, 50.5 96 0.0033 24.9 12.9 82 37-123 167-261 (357)
350 2lc4_A PILP protein; type IV p 48.0 28 0.00097 24.1 4.5 56 105-191 42-98 (111)
351 3hx6_A Type 4 fimbrial biogene 38.0 70 0.0024 28.7 6.5 52 37-89 222-284 (570)
352 4hvt_A Ritya.17583.B, post-pro 35.5 2.6E+02 0.009 25.6 17.5 50 160-215 268-330 (711)
353 3hx6_A Type 4 fimbrial biogene 34.9 2.1E+02 0.0071 25.7 9.1 57 160-217 222-287 (570)
354 1s1d_A Apyrase; adpase, five-b 32.4 1.1E+02 0.0036 25.4 6.3 44 160-205 114-162 (331)
355 2y4x_A PILP protein; biosynthe 27.3 1.1E+02 0.0037 20.3 4.6 46 106-182 36-82 (93)
356 3s9j_A Member of DUF4221 famil 23.5 3.2E+02 0.011 22.8 13.7 51 39-90 53-111 (369)
357 4hvt_A Ritya.17583.B, post-pro 23.2 4.3E+02 0.015 24.1 11.9 83 37-123 268-368 (711)
358 2hw2_A Rifampin ADP-ribosyl tr 22.9 34 0.0012 24.6 1.5 36 12-51 47-82 (143)
359 2be1_A Serine/threonine-protei 22.7 3E+02 0.01 22.6 7.6 14 37-50 221-234 (339)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.95 E-value=3.4e-26 Score=193.56 Aligned_cols=189 Identities=27% Similarity=0.444 Sum_probs=151.3
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
+|||+++++ +|+||||++...+++..+...+++....|+|+++|+++++++.+...+..||||++++||+.|||+++..
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~ 206 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLS 206 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGG
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCC
Confidence 589999999 9999999987445544444444555678999999998788888777889999999999999999999999
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
++|++|++++...+..+.+.+ .++ |+||++|++|+|||+....+..+ |. .. .
T Consensus 207 ~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~~-----------------~~-------~~--~ 258 (322)
T 2fp8_A 207 HQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDGN-----------------MH-------GR--V 258 (322)
T ss_dssp TEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTSS-----------------TT-------SC--E
T ss_pred CeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCccccc-----------------cc-------CC--C
Confidence 999999998655566667764 567 99999999999999998743211 00 01 1
Q ss_pred ceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCCccc
Q 047259 160 GARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNTPEA 217 (225)
Q Consensus 160 ~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~~~ 217 (225)
.+.|.++|++|+++..+..|+|..+..++.++..+++|||++...++|.+|+++...-
T Consensus 259 ~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~~~ 316 (322)
T 2fp8_A 259 DPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKKGN 316 (322)
T ss_dssp EEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-----
T ss_pred ccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecccccC
Confidence 5789999999999999999887656778888888999999999999999999876543
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.93 E-value=6.5e-25 Score=189.10 Aligned_cols=183 Identities=21% Similarity=0.303 Sum_probs=141.2
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchh-hhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEY-YKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~-~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
+|||++++++|++|+|++.- |.-..+ ..+...+.+.|+||++++. +++.+.+++..||||+|||||++|||+++..
T Consensus 166 ~pND~~v~~~G~fyvt~~~~-ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~ 242 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHY-FIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLA 242 (355)
T ss_dssp SEEEEEEEETTEEEEEESCS-CSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred CCceEEEeCCCCEEecCCcE-eCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCC
Confidence 48999999999999999851 221111 1123345678999999984 7788889999999999999999999999999
Q ss_pred CEEEEEEecC-CCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 80 FRCRRYWLKG-PRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 80 ~~I~~~~~~~-~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
++|++|+++. +.++..++| ..++.||||++|+ +|++|++.+.....+..+ -|. ..+
T Consensus 243 ~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~-------------~P~-------~~~ 300 (355)
T 3sre_A 243 HKIHVYEKHANWTLTPLRVL--SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFY-------------DAE-------NPP 300 (355)
T ss_dssp TEEEEEEECTTSCEEEEEEE--ECSSEEEEEEECTTTCCEEEEEESCHHHHHSC-------------CTT-------SCC
T ss_pred CeEEEEEECCCCcEecCEEE--eCCCCCceEEEeCCCCcEEEEecCCceEEEEE-------------CCC-------CCC
Confidence 9999999974 345556666 3578999999999 599999876422111111 111 112
Q ss_pred CcceEEEEEC----CCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeC
Q 047259 158 DAGARIVKVD----THGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPL 212 (225)
Q Consensus 158 ~~~~~V~~~d----~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~ 212 (225)
...|.|+. .++++.+++++ +|+.++.+|.++..+++||+++...+ +..|++
T Consensus 301 --~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 301 --GSEVLRIQDILSEEPKVTVVYAE-NGTVLQGSTVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp --CEEEEEEECTTSSSCEEEEEEEE-CSSSCCSEEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred --CCEEEEEEccCCCCcEEEEEEEc-CCCEEEeeEEEEEECCEEEEEEcCCC-ceeccC
Confidence 67888887 46889999998 89999999999999999999999877 777764
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.84 E-value=1.9e-19 Score=150.94 Aligned_cols=165 Identities=18% Similarity=0.281 Sum_probs=125.4
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhh--hcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYK--DLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~--~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.||+++++++|+|||||+. +|...... ....+...+.|+++|+++++++.+. .+..|||++++||++.||++++.
T Consensus 132 ~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp CCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECC
T ss_pred CCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecC
Confidence 3899999999999999985 33211100 0112234678999999778888777 88899999999999999999987
Q ss_pred C-----CEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhc
Q 047259 79 K-----FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLI 153 (225)
Q Consensus 79 ~-----~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~ 153 (225)
. ++|++|++++..+...+++.....+.|++|++|++|+||++...
T Consensus 209 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~------------------------------ 258 (305)
T 3dr2_A 209 EQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT------------------------------ 258 (305)
T ss_dssp C---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS------------------------------
T ss_pred CcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC------------------------------
Confidence 4 89999998753344455665444678999999999999998732
Q ss_pred cCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCC
Q 047259 154 PLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 154 ~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~ 213 (225)
.|.+++++|+.+..+..|.+ ++.++. +++.||+++. +.+++++++
T Consensus 259 --------gv~~~~~~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~~--~~l~~~~~~ 305 (305)
T 3dr2_A 259 --------GVCVFDSDGQLLGHIPTPGT-----ASNCTFDQAQQRLFITGG--PCLWMLPLP 305 (305)
T ss_dssp --------EEEEECTTSCEEEEEECSSC-----CCEEEECTTSCEEEEEET--TEEEEEECC
T ss_pred --------cEEEECCCCCEEEEEECCCc-----eeEEEEeCCCCEEEEEcC--CeEEEEECC
Confidence 49999999999999988753 344454 4578999985 578887653
No 4
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.84 E-value=1.4e-19 Score=151.26 Aligned_cols=156 Identities=19% Similarity=0.272 Sum_probs=121.8
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
||+++++++|+||++++.... . ........+.||+++++ +++..+...+..||||+++||++.||++++..++
T Consensus 100 ~~di~~d~dG~l~~~~~~~~~--~----~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~ 172 (297)
T 3g4e_A 100 FNDGKVDPAGRYFAGTMAEET--A----PAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYS 172 (297)
T ss_dssp EEEEEECTTSCEEEEEEECCS--B----TTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTE
T ss_pred CCCEEECCCCCEEEecCCccc--c----cccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCc
Confidence 689999999999999875210 0 00112357899999986 7777777888999999999999999999999999
Q ss_pred EEEEEec--CCCCCceeEEecc--CCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 82 CRRYWLK--GPRQGRLESFIEH--LPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 82 I~~~~~~--~~~~~~~~~~~~~--~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
|++|+++ ++.+...+++... ..+.|++|++|++|+||++.+.
T Consensus 173 i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~---------------------------------- 218 (297)
T 3g4e_A 173 VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN---------------------------------- 218 (297)
T ss_dssp EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET----------------------------------
T ss_pred EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC----------------------------------
Confidence 9999974 2333344556542 2367999999999999999987
Q ss_pred CcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEe---CCEEEEeeCCC
Q 047259 158 DAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEF---EDNLYMASIQS 204 (225)
Q Consensus 158 ~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~---~~~Lyv~~~~~ 204 (225)
.+.|.++|++ |+++..+..|.. .++.+++. .++|||++...
T Consensus 219 --~~~v~~~d~~tG~~~~~i~~p~~----~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 219 --GGRVIRLDPVTGKRLQTVKLPVD----KTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp --TTEEEEECTTTCCEEEEEECSSS----BEEEEEEESGGGCEEEEEEBCT
T ss_pred --CCEEEEEcCCCceEEEEEECCCC----CceEEEEeCCCCCEEEEEcCCc
Confidence 5689999998 999999988743 36667664 37999998753
No 5
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=1.5e-17 Score=138.08 Aligned_cols=167 Identities=19% Similarity=0.232 Sum_probs=125.1
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhh--hcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYK--DLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~--~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.||+++++++|+||+|++. +|...... ........+.||+++++ ++++.+......|+||+++|||+.| ++++.
T Consensus 116 ~~~~i~~d~~G~l~vtd~~--~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~ 191 (296)
T 3e5z_A 116 SPNDVCLAPDGSLWFSDPT--YGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTG 191 (296)
T ss_dssp CCCCEEECTTSCEEEEECS--HHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETT
T ss_pred CCCCEEECCCCCEEEECCc--cccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCC
Confidence 4789999999999999874 11100000 00112246799999987 8888888888999999999999977 99999
Q ss_pred CCEEEEEEec-CCCC-CceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 KFRCRRYWLK-GPRQ-GRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 ~~~I~~~~~~-~~~~-~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
.++|++|+++ .+.. ...+++ ....+.|++|++|++|+||++. .
T Consensus 192 ~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~--------------------------------- 236 (296)
T 3e5z_A 192 DNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-G--------------------------------- 236 (296)
T ss_dssp TTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-T---------------------------------
T ss_pred CCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-C---------------------------------
Confidence 9999999986 2223 334555 4455689999999999999998 3
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEE---eCCEEEEeeCCCCeEEEEeCCCccc
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVE---FEDNLYMASIQSKFVGKLPLNTPEA 217 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~---~~~~Lyv~~~~~~~i~~~~~~~~~~ 217 (225)
+.|.+++++|+.+..+..+.+ ++.++. +++.||+++. +.+.++++.+..-
T Consensus 237 ----~~v~~~~~~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 237 ----DGVHVLTPDGDELGRVLTPQT-----TSNLCFGGPEGRTLYMTVS--TEFWSIETNVRGL 289 (296)
T ss_dssp ----TEEEEECTTSCEEEEEECSSC-----CCEEEEESTTSCEEEEEET--TEEEEEECSCCBC
T ss_pred ----CeEEEECCCCCEEEEEECCCC-----ceeEEEECCCCCEEEEEcC--CeEEEEEcccccc
Confidence 268999999999988887654 344444 2468999985 6899998876543
No 6
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.78 E-value=1.3e-17 Score=147.33 Aligned_cols=160 Identities=13% Similarity=0.107 Sum_probs=123.5
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeE-EEEe--cCccccceeEEecCCCEEEEEe
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEET-TVLH--EGFYFANGVALSKDENFVVVCE 76 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~-~~~~--~~~~~pnGi~~~~dg~~Lyv~~ 76 (225)
+|+++++++ +|+|||++.. .++|++++++++++ +.+. .....+++|+++|+|++|||++
T Consensus 229 ~P~giavd~~~G~lyv~d~~-----------------~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYH-----------------HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp SBCCCEECTTTCCEEECBTT-----------------CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCEEEEeCCCCeEEEEECC-----------------CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 489999999 8999999986 67999999977776 4433 2345667899999999999999
Q ss_pred CCCCEEEEEEecC--CCCCceeEEecc--CC------------CCCCceEE---------CCCCCEEEEeecCCchhhhh
Q 047259 77 SWKFRCRRYWLKG--PRQGRLESFIEH--LP------------GGPDNINL---------APDGSFWVALIKMNQTGVRA 131 (225)
Q Consensus 77 ~~~~~I~~~~~~~--~~~~~~~~~~~~--~~------------g~Pd~i~~---------d~~G~l~v~~~~~~~~~~~~ 131 (225)
+..++|+++++++ ..+....+++.. .. ..|.+|++ |++|+|||++..
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~-------- 363 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD-------- 363 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT--------
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC--------
Confidence 9999999999863 223333444431 11 24888999 999999999987
Q ss_pred hhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCC--------C-----CcccceeEEEEe--CCE
Q 047259 132 IQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPN--------A-----TYISFVTSAVEF--EDN 196 (225)
Q Consensus 132 ~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~--------g-----~~~~~~t~~~~~--~~~ 196 (225)
..+|.+++++|++......+. | ..+..|.+++.+ ++.
T Consensus 364 ----------------------------n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~ 415 (433)
T 4hw6_A 364 ----------------------------SHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC 415 (433)
T ss_dssp ----------------------------TTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE
T ss_pred ----------------------------CCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE
Confidence 568999999997765543211 1 125668888766 799
Q ss_pred EEEeeCCCCeEEEEeCC
Q 047259 197 LYMASIQSKFVGKLPLN 213 (225)
Q Consensus 197 Lyv~~~~~~~i~~~~~~ 213 (225)
|||++..+++|.++.+.
T Consensus 416 lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 416 FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCEEEEEecC
Confidence 99999999999999864
No 7
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=5.8e-17 Score=142.97 Aligned_cols=160 Identities=14% Similarity=0.148 Sum_probs=122.9
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cCccccceeEEecCCCEEEEEeC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EGFYFANGVALSKDENFVVVCES 77 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~pnGi~~~~dg~~Lyv~~~ 77 (225)
+|+++++++ +|.|||+|.. .++|++++++++....+. ....+|+||+++|+|++|||++.
T Consensus 227 ~p~giavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWN-----------------AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp SCCCEEECTTTCCEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred CceEEEEeCCCCEEEEEECC-----------------CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 589999999 8999999987 679999999866653332 34568999999999999999999
Q ss_pred CCCEEEEEEecCC--CCCceeEEecc--C------------CCCCC-ceEE--------CCCCCEEEEeecCCchhhhhh
Q 047259 78 WKFRCRRYWLKGP--RQGRLESFIEH--L------------PGGPD-NINL--------APDGSFWVALIKMNQTGVRAI 132 (225)
Q Consensus 78 ~~~~I~~~~~~~~--~~~~~~~~~~~--~------------~g~Pd-~i~~--------d~~G~l~v~~~~~~~~~~~~~ 132 (225)
..++|++++.++. .+....+++.. . -..|. ++++ |++|+|||++..
T Consensus 290 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~--------- 360 (430)
T 3tc9_A 290 NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE--------- 360 (430)
T ss_dssp TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG---------
T ss_pred CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC---------
Confidence 9999999998752 12223334321 0 11477 8888 567999999988
Q ss_pred hcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECC--------CC-----CcccceeEEEEe--CCEE
Q 047259 133 QSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDP--------NA-----TYISFVTSAVEF--EDNL 197 (225)
Q Consensus 133 ~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p--------~g-----~~~~~~t~~~~~--~~~L 197 (225)
+.+|.+++++|++....... +| ..+..|.+++.+ ++.|
T Consensus 361 ---------------------------n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~l 413 (430)
T 3tc9_A 361 ---------------------------NHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECF 413 (430)
T ss_dssp ---------------------------GTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEE
T ss_pred ---------------------------CcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEE
Confidence 56899999999876665431 11 125578888765 5999
Q ss_pred EEeeCCCCeEEEEeCC
Q 047259 198 YMASIQSKFVGKLPLN 213 (225)
Q Consensus 198 yv~~~~~~~i~~~~~~ 213 (225)
||++..+++|.++.+.
T Consensus 414 yVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 414 FIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEGGGTEEEEEEEC
T ss_pred EEEECCCCeEEEEccC
Confidence 9999999999999864
No 8
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.76 E-value=8.5e-17 Score=135.06 Aligned_cols=145 Identities=18% Similarity=0.185 Sum_probs=106.2
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE-----------ecCccccceeEEecCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL-----------HEGFYFANGVALSKDE 69 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-----------~~~~~~pnGi~~~~dg 69 (225)
|+|+++..+++++|+++.. .|+||++|..+++.+.. ...+..|||| ++|+
T Consensus 118 ~~~g~~~~~~~~~~v~d~~-----------------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 118 FLNGITPLSDTQYLTADSY-----------------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp CEEEEEESSSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred ccCcccccCCCcEEEEECC-----------------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 3455665555666776654 67999999875533321 1345689999 8999
Q ss_pred CEEEEEeCCCCEEEEEEecC-CCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhh
Q 047259 70 NFVVVCESWKFRCRRYWLKG-PRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPEL 148 (225)
Q Consensus 70 ~~Lyv~~~~~~~I~~~~~~~-~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~ 148 (225)
+.|||+++..++|++|++++ +.++..+++.. . ..|++|++|++|+|||++..
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~-~~P~gi~vd~dG~l~va~~~------------------------- 231 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-Q-TNIDDFAFDVEGNLYGATHI------------------------- 231 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-S-CCCSSEEEBTTCCEEEECBT-------------------------
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-c-CCCCCeEECCCCCEEEEeCC-------------------------
Confidence 99999999999999999975 33455566653 2 46999999999999999987
Q ss_pred hhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-----CCEEEEeeCCC
Q 047259 149 INLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-----EDNLYMASIQS 204 (225)
Q Consensus 149 ~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-----~~~Lyv~~~~~ 204 (225)
.++|.+++++|++......+.+ +..++.++.. +++|||++..+
T Consensus 232 -----------~~~V~~~~~~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 232 -----------YNSVVRIAPDRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp -----------TCCEEEECTTCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred -----------CCeEEEECCCCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 5689999999988544333322 3457777763 38999998763
No 9
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.75 E-value=8.5e-17 Score=138.14 Aligned_cols=157 Identities=13% Similarity=0.105 Sum_probs=121.8
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|+++++++ .|+||+||.. .++|++++.+....+.+. ..+..|+||+++|+++.||++++.
T Consensus 117 ~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~ 179 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG 179 (349)
T ss_dssp CCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECS
T ss_pred CccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccC
Confidence 378999997 6789999987 568999998744444444 567899999999988899999999
Q ss_pred C-CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 K-FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 ~-~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
. ++|+|+++++. ..+++....-..|+||++|+ +|+||+++..
T Consensus 180 ~~~~I~r~~~dG~---~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~--------------------------------- 223 (349)
T 3v64_C 180 NTPRIEASSMDGS---GRRIIADTHLFWPNGLTIDYAGRRMYWVDAK--------------------------------- 223 (349)
T ss_dssp SSCEEEEEETTSC---SCEESCCSSCSCEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CCCEEEEEeCCCC---CcEEEEECCCCCcceEEEeCCCCEEEEEECC---------------------------------
Confidence 8 99999999863 33334322234699999996 6789999987
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEe-CCCcc
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLP-LNTPE 216 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~-~~~~~ 216 (225)
...|.+++.+|.....+... + +..+.+++..+++||++++.+++|.+++ .++..
T Consensus 224 ---~~~I~~~~~dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 224 ---HHVIERANLDGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp ---TTEEEEEETTSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred ---CCEEEEEeCCCCceEEEEeC-C--CCCceEEEEECCEEEEecCCCCeEEEEEccCCCc
Confidence 56899999998765554431 1 3457777778999999999999999998 45443
No 10
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.75 E-value=1.6e-16 Score=134.40 Aligned_cols=156 Identities=15% Similarity=0.136 Sum_probs=121.5
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++++++. .|+||++|.. .++|.+++.+....+.+. ..+..|+||+++|+++.||+++.+
T Consensus 78 ~p~glavd~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp CCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS
T ss_pred CcCEEEEeecCCeEEEEECC-----------------CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC
Confidence 378999996 6789999987 578999998744455554 467899999999988889999988
Q ss_pred C-CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 K-FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 ~-~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
. ++|++++++|. ..+++....-..|+||++|+ +++||+++..
T Consensus 141 ~~~~I~~~~~dG~---~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~--------------------------------- 184 (316)
T 1ijq_A 141 TPAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSK--------------------------------- 184 (316)
T ss_dssp SSCEEEEEETTSC---CEEEEECSSCSCEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CCCeEEEEcCCCC---CeEEEEECCCCCceEEEEeccCCEEEEEECC---------------------------------
Confidence 6 89999999863 33444432234799999996 5789999977
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCC
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~ 213 (225)
...|.++|.+|...+.+....+. +..+.+++.++++||++++.+++|.+++..
T Consensus 185 ---~~~I~~~d~dg~~~~~~~~~~~~-~~~P~giav~~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 185 ---LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp ---TTEEEEEETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ---CCeEEEEecCCCceEEEeecCCc-cCCcEEEEEECCEEEEEECCCCeEEEEeCC
Confidence 56899999998766555432122 456777777889999999999999999863
No 11
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.74 E-value=1.4e-16 Score=132.29 Aligned_cols=172 Identities=18% Similarity=0.273 Sum_probs=126.8
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEe----cCCCEEEEEe
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALS----KDENFVVVCE 76 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~----~dg~~Lyv~~ 76 (225)
.|++++++++|++|+++.....-...+ ........+.|++++++ ++.+.+......|++++++ +||+.||+++
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADY--TRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCC--CBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred CCcCEEECCCCCEEEEecCcccccccc--cccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEE
Confidence 378999999999999987521000000 00112346899999987 7777776777889999999 9998899999
Q ss_pred CCCCEEEEEEec-CCCCCceeEEeccCC----CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhh
Q 047259 77 SWKFRCRRYWLK-GPRQGRLESFIEHLP----GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINL 151 (225)
Q Consensus 77 ~~~~~I~~~~~~-~~~~~~~~~~~~~~~----g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~ 151 (225)
+..++|++|+++ .+.....+.+.. .+ +.|+++++|++|++|++...
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~i~~d~~G~l~v~~~~---------------------------- 245 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGH-IPGTHEGGADGMDFDEDNNLLVANWG---------------------------- 245 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEE-CCCCSSCEEEEEEEBTTCCEEEEEET----------------------------
T ss_pred CCCCeEEEEECCCCCccccceEEEE-CCCCCCCCCCceEECCCCCEEEEEcC----------------------------
Confidence 999999999986 222222333432 22 56999999999999999876
Q ss_pred hccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEe-C-CEEEEeeCCCCeEEEEeCCCcc
Q 047259 152 LIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEF-E-DNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 152 ~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~-~-~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.+.|.++|++ |+.+..+..+.. .++.++.. + ..||+++...+.|.++++....
T Consensus 246 --------~~~i~~~d~~~g~~~~~~~~~~~----~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 246 --------SSHIEVFGPDGGQPKMRIRCPFE----KPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp --------TTEEEEECTTCBSCSEEEECSSS----CEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred --------CCEEEEEcCCCCcEeEEEeCCCC----CceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 4589999998 888777876532 35556543 4 4599999999999999987643
No 12
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.73 E-value=2.5e-16 Score=133.71 Aligned_cols=154 Identities=16% Similarity=0.087 Sum_probs=122.0
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++++++. .|+||+||.. .++|.+++.+....+.+. ..+..|+||+++|+++.||+++.+
T Consensus 80 ~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~ 142 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSE-----------------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG 142 (318)
T ss_dssp CCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECS
T ss_pred CccEEEEEcCCCeEEEEECC-----------------CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecC
Confidence 488999996 6789999987 578999998744444444 678899999999988889999976
Q ss_pred -CCEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 -KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 -~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
.++|++++++|. ..+++....-..|+||++|+ +++||+++..
T Consensus 143 ~~~~I~r~~~dG~---~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~--------------------------------- 186 (318)
T 3sov_A 143 EVPKIERAGMDGS---SRFIIINSEIYWPNGLTLDYEEQKLYWADAK--------------------------------- 186 (318)
T ss_dssp SSCEEEEEETTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CCCEEEEEEcCCC---CeEEEEECCCCCccEEEEeccCCEEEEEECC---------------------------------
Confidence 689999999863 23344432234699999997 6789999977
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCC
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~ 213 (225)
...|.++|.+|...+.+.. +. +..+.+++.+++.||++++.+++|.+++..
T Consensus 187 ---~~~I~~~d~dG~~~~~~~~--~~-~~~P~glav~~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 187 ---LNFIHKSNLDGTNRQAVVK--GS-LPHPFALTLFEDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp ---TTEEEEEETTSCSCEEEEC--SC-CSCEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ---CCEEEEEcCCCCceEEEec--CC-CCCceEEEEeCCEEEEEecCCCeEEEEECC
Confidence 5689999999876666653 22 456777777899999999999999999984
No 13
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.73 E-value=2.2e-16 Score=133.80 Aligned_cols=151 Identities=21% Similarity=0.296 Sum_probs=117.5
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
+|+++++++|++|++++... .....+.||+++ + ++++.+......||+|+++|||+.||++++..++
T Consensus 136 ~~~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~-~-g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 136 SNDGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA-K-GKVTKLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp EEEEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE-T-TEEEEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred CCCEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe-C-CcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 57899999999999976411 123468999999 4 7877776677789999999999999999999999
Q ss_pred EEEEEec--CC-CCCceeEEecc--CCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 82 CRRYWLK--GP-RQGRLESFIEH--LPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 82 I~~~~~~--~~-~~~~~~~~~~~--~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
|++|+++ ++ .....+++... ..+.|+++++|++|+||++...
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~--------------------------------- 249 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG--------------------------------- 249 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET---------------------------------
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC---------------------------------
Confidence 9999986 33 33334455431 3457999999999999999876
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe---CCEEEEeeCCCC
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF---EDNLYMASIQSK 205 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~---~~~Lyv~~~~~~ 205 (225)
.+.|.+++++|+.+..+..|.. .++.++.. ++.|||++...+
T Consensus 250 ---~~~v~~~d~~g~~~~~i~~~~~----~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 250 ---EGAVDRYDTDGNHIARYEVPGK----QTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ---TTEEEEECTTCCEEEEEECSCS----BEEEEEEESTTSCEEEEEEBCTT
T ss_pred ---CCEEEEECCCCCEEEEEECCCC----CcEEEEEecCCCCEEEEEecCCC
Confidence 4589999999999888887643 35666653 378999987763
No 14
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.73 E-value=2.2e-16 Score=137.36 Aligned_cols=156 Identities=13% Similarity=0.103 Sum_probs=121.4
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|+++++++ .|+||++|.. .++|++++.+....+.+. .++..|+||+++|+++.||+++..
T Consensus 160 ~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~ 222 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG 222 (386)
T ss_dssp CCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS
T ss_pred CccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC
Confidence 488999996 6789999987 568899888644434443 567899999999988899999999
Q ss_pred C-CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 K-FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 ~-~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
. ++|+|+++++. ..+++.......|+||++|+ +++||+++..
T Consensus 223 ~~~~I~r~~~dG~---~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~--------------------------------- 266 (386)
T 3v65_B 223 NTPRIEASSMDGS---GRRIIADTHLFWPNGLTIDYAGRRMYWVDAK--------------------------------- 266 (386)
T ss_dssp SSCEEEEEETTSC---SCEEEECSSCSCEEEEEEEGGGTEEEEEETT---------------------------------
T ss_pred CCCEEEEEeCCCC---CcEEEEECCCCCeeeEEEeCCCCEEEEEECC---------------------------------
Confidence 8 99999999863 33344432234699999995 6789999977
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEe-CCCc
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLP-LNTP 215 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~-~~~~ 215 (225)
...|.+++.+|.....+... + +..+.+++..++.||++++.+++|.+++ ..+.
T Consensus 267 ---~~~I~~~d~dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 267 ---HHVIERANLDGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp ---TTEEEEECTTSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ---CCEEEEEeCCCCeeEEEEEC-C--CCCceEEEEECCEEEEeeCCCCeEEEEECCCCc
Confidence 56899999998765555432 2 3457777778999999999999999998 4443
No 15
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.73 E-value=2.2e-16 Score=138.05 Aligned_cols=157 Identities=16% Similarity=0.153 Sum_probs=122.7
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++|+++. .++||++|.. .++|.+++.+.+..+.+. ..+..|+||+++|.++.||+++.+
T Consensus 160 ~p~glavD~~~~~lY~~d~~-----------------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp CEEEEEEETTTTEEEEEETT-----------------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS
T ss_pred CcccEEEEecCCceEEEECC-----------------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC
Confidence 378999997 6789999987 578999998755555554 578889999999988889999987
Q ss_pred C-CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 K-FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 ~-~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
. ++|++++++|. ..+++....-..|.||++|+ +++||+++..
T Consensus 223 ~~~~I~~~~~dG~---~~~~~~~~~l~~P~glavd~~~~~lY~aD~~--------------------------------- 266 (400)
T 3p5b_L 223 TPAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSK--------------------------------- 266 (400)
T ss_dssp SSCCEEEEETTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CCCEEEEEeCCCC---ccEEEEECCCCceEEEEEEeCCCEEEEEECC---------------------------------
Confidence 4 89999999873 33344432234799999995 5789999977
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEe-CCC
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLP-LNT 214 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~-~~~ 214 (225)
...|.++|.+|.....+....+. +..+.+++..+++||++++.+++|.+++ ..+
T Consensus 267 ---~~~I~~~d~dG~~~~~~~~~~~~-l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 267 ---LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp ---TTEEEEEETTSCCCEEEEECSST-TSSEEEEEEETTEEEEEESSSCSEEEEESSSC
T ss_pred ---CCEEEEEeCCCCccEEEEeCCCC-CCCCEEEEEeCCEEEEecCCCCeEEEEEcCCC
Confidence 55899999998766555432222 5567777778999999999999999998 444
No 16
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=5.9e-16 Score=135.59 Aligned_cols=154 Identities=16% Similarity=0.169 Sum_probs=116.4
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE----ecCcc--ccc-eeEEecCCCEE
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL----HEGFY--FAN-GVALSKDENFV 72 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~----~~~~~--~pn-Gi~~~~dg~~L 72 (225)
.|+++++++ +|+||+++. .++|+++|.+++..+.+ ..+.. .|. +|+++|+++.|
T Consensus 220 ~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 220 KIGAVALDETEEWLYFVDS------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp CCCBCEECTTSSEEEEECT------------------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred CcEEEEEeCCCCeEEEEEC------------------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 478999999 789999754 46899999987766555 22222 244 99999976789
Q ss_pred EEEeCCCCEEEEEEecCCCCCceeEEeccC--------------CCCCCceEECCCCCEEEEee-cCCchhhhhhhcChh
Q 047259 73 VVCESWKFRCRRYWLKGPRQGRLESFIEHL--------------PGGPDNINLAPDGSFWVALI-KMNQTGVRAIQSCPD 137 (225)
Q Consensus 73 yv~~~~~~~I~~~~~~~~~~~~~~~~~~~~--------------~g~Pd~i~~d~~G~l~v~~~-~~~~~~~~~~~~~~~ 137 (225)
||+++..++|++++.++. ...++... -..|.+|++|++|+||+++. .
T Consensus 282 yv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-------------- 343 (409)
T 3hrp_A 282 YMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-------------- 343 (409)
T ss_dssp EEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT--------------
T ss_pred EEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC--------------
Confidence 999999999999998752 33333211 13599999999999999998 6
Q ss_pred HHHHHHhhhhhhhhhccCCCCcceEEEEEC-CCCcEEEEEECCC------C----CcccceeEEEEe-CCEEEEeeCCCC
Q 047259 138 KWKLLQAYPELINLLIPLGNDAGARIVKVD-THGKIIMDFNDPN------A----TYISFVTSAVEF-EDNLYMASIQSK 205 (225)
Q Consensus 138 ~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d-~~G~~~~~~~~p~------g----~~~~~~t~~~~~-~~~Lyv~~~~~~ 205 (225)
..+|.+++ ++|++......+. | ..+..+..++.+ ++.|||++..++
T Consensus 344 ----------------------~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~ 401 (409)
T 3hrp_A 344 ----------------------GYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGK 401 (409)
T ss_dssp ----------------------TCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTC
T ss_pred ----------------------CCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCC
Confidence 56899999 7888765544311 1 125668888765 599999999999
Q ss_pred eEEEEeC
Q 047259 206 FVGKLPL 212 (225)
Q Consensus 206 ~i~~~~~ 212 (225)
+|.++.+
T Consensus 402 ~Ir~i~~ 408 (409)
T 3hrp_A 402 AIRKYAV 408 (409)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999876
No 17
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.72 E-value=6.3e-16 Score=126.86 Aligned_cols=154 Identities=10% Similarity=0.083 Sum_probs=117.6
Q ss_pred CCCcEEEcCC-CcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASD-GSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~d-G~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++++++++ |+||++|.. .++|++++.+....+.+. .++..|+||+++|+++.|||++..
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~ 142 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQ-----------------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWN 142 (267)
T ss_dssp CEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECC
T ss_pred CccEEEEEecCCeEEEEECC-----------------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECC
Confidence 3789999985 689999986 568999998643334443 456899999999987889999987
Q ss_pred --CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC-CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 79 --KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD-GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 79 --~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~-G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
.++|+++++++. ..+++.......|.+|++|++ ++||+++..
T Consensus 143 ~~~~~I~~~~~dg~---~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~-------------------------------- 187 (267)
T 1npe_A 143 RDNPKIETSHMDGT---NRRILAQDNLGLPNGLTFDAFSSQLCWVDAG-------------------------------- 187 (267)
T ss_dssp SSSCEEEEEETTSC---CCEEEECTTCSCEEEEEEETTTTEEEEEETT--------------------------------
T ss_pred CCCcEEEEEecCCC---CcEEEEECCCCCCcEEEEcCCCCEEEEEECC--------------------------------
Confidence 689999998763 233343222346999999996 579999987
Q ss_pred CCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 047259 156 GNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
...|.+++++|.....+.. . ...+..++.++++||++++.+++|.+++..+
T Consensus 188 ----~~~I~~~~~~g~~~~~~~~-~---~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 188 ----THRAECLNPAQPGRRKVLE-G---LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp ----TTEEEEEETTEEEEEEEEE-C---CCSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred ----CCEEEEEecCCCceEEEec-C---CCCceEEEEeCCEEEEEECCCCeEEEEeCCC
Confidence 5689999999865444432 1 2345667777999999999999999999874
No 18
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.71 E-value=8.1e-16 Score=126.23 Aligned_cols=158 Identities=13% Similarity=0.065 Sum_probs=121.5
Q ss_pred CCcEEEcCC-CcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCC
Q 047259 2 TNDVIEASD-GSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 2 pndv~~~~d-G~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
|++++++++ ++||++|.. .++|++++.+++..+.+. .++..|+||+++++++.|||++...
T Consensus 38 ~~gi~~d~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~ 100 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDIS-----------------EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQL 100 (267)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEecCCCEEEEEECC-----------------CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCC
Confidence 678999984 689999986 579999998755555444 4568999999999888899999999
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
++|.++++++. ..+.+.......|.++++|+ +|+||+++....
T Consensus 101 ~~I~~~~~~g~---~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~--------------------------------- 144 (267)
T 1npe_A 101 DRIEVAKMDGT---QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD--------------------------------- 144 (267)
T ss_dssp TEEEEEETTSC---SCEEEECSSCSSEEEEEEETTTTEEEEEECCSS---------------------------------
T ss_pred CEEEEEEcCCC---CEEEEEECCCCCccEEEEeeCCCEEEEEECCCC---------------------------------
Confidence 99999999763 22334322224699999999 588999986511
Q ss_pred cceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcc
Q 047259 159 AGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 159 ~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.+.|.+++.+|+....+... + +..+..++.+ +++||+++...++|.++++++..
T Consensus 145 -~~~I~~~~~dg~~~~~~~~~-~--~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 145 -NPKIETSHMDGTNRRILAQD-N--LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp -SCEEEEEETTSCCCEEEECT-T--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred -CcEEEEEecCCCCcEEEEEC-C--CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 46889999999776666532 1 3457777654 68999999999999999998643
No 19
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=1.3e-15 Score=128.90 Aligned_cols=174 Identities=17% Similarity=0.208 Sum_probs=124.7
Q ss_pred CCcEEEcCCCcEEEEcCCCCC-Ccch------hhhhcccCCCCcEEEEEeCCCCeEEEEec--CccccceeEEecCCCEE
Q 047259 2 TNDVIEASDGSLYFTVSSKKY-TPAE------YYKDLVEGKPHGQLLKYDPELEETTVLHE--GFYFANGVALSKDENFV 72 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~-~~~~------~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~pnGi~~~~dg~~L 72 (225)
|.+|+++++|+||+++..... .... +......-...+.|+.+|.+++++..... .+..|+||+++++|+ |
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l 104 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-Y 104 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-E
T ss_pred ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-E
Confidence 568999999999999886310 0000 00000011235789999998787765443 356899999999998 9
Q ss_pred EEEeCCCCEEEEEEecCCCCCceeEEec--------cCCCCCCceEECC-CCCEEEEee-cCCchhhhhhhcChhHHHHH
Q 047259 73 VVCESWKFRCRRYWLKGPRQGRLESFIE--------HLPGGPDNINLAP-DGSFWVALI-KMNQTGVRAIQSCPDKWKLL 142 (225)
Q Consensus 73 yv~~~~~~~I~~~~~~~~~~~~~~~~~~--------~~~g~Pd~i~~d~-~G~l~v~~~-~~~~~~~~~~~~~~~~r~~~ 142 (225)
||++...++|++|++++. ......+.. .....|.++++|+ +|+|||++. .
T Consensus 105 ~v~d~~~~~v~~~~~~g~-~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~------------------- 164 (329)
T 3fvz_A 105 WVTDVALHQVFKLDPHSK-EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC------------------- 164 (329)
T ss_dssp EEEETTTTEEEEECTTCS-SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-------------------
T ss_pred EEEECCCCEEEEEeCCCC-eEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-------------------
Confidence 999999999999998753 112222321 1112599999999 899999996 5
Q ss_pred HhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCC-C-----CcccceeEEEEe-C-CEEEEeeCCCCeEEEEeCC
Q 047259 143 QAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPN-A-----TYISFVTSAVEF-E-DNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 143 ~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~-g-----~~~~~~t~~~~~-~-~~Lyv~~~~~~~i~~~~~~ 213 (225)
..+|.+++++|+.+..+.... + ..+..+..++.+ + ++|||++..+++|.+++++
T Consensus 165 -----------------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 165 -----------------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp -----------------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -----------------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 568999999999988775321 1 125567777764 4 8999999999999999997
No 20
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.71 E-value=6.4e-16 Score=145.49 Aligned_cols=155 Identities=15% Similarity=0.130 Sum_probs=123.0
Q ss_pred CCCcEEEcCCC-cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDG-SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG-~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++|+++..+ +||+||.. .++|++++.+.+..+.++ ..+..|+||+++|.++.|||++++
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~-----------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g 534 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 534 (791)
T ss_dssp CCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS
T ss_pred CcceeeeeecCCcEEEEecC-----------------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC
Confidence 48999999865 89999987 579999998755555554 578889999999998889999988
Q ss_pred C-CEEEEEEecCCCCCceeEEeccCCCCCCceEEC-CCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 K-FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLA-PDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 ~-~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d-~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
. ++|++++++|. ..++++......|.||++| ..|+||+++..
T Consensus 535 ~~~~I~~~~~dG~---~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~--------------------------------- 578 (791)
T 3m0c_C 535 TPAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSK--------------------------------- 578 (791)
T ss_dssp SSCEEEEEETTSC---CEEEEECSSCSCEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CCCeEEEEecCCC---ceEEEEeCCCCCceEEEEecCCCeEEEEeCC---------------------------------
Confidence 7 89999999873 3444543333479999999 46889999977
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeC
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPL 212 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~ 212 (225)
...|.+++.+|.....+....+. +..+.+++..+++||++++..++|.+++.
T Consensus 579 ---~~~I~~~d~dG~~~~~v~~~~~~-l~~P~glav~~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 579 ---LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp ---TTEEEEEETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ---CCcEEEEecCCCceEEEecCCCc-cCCCCEEEEeCCEEEEEECCCCEEEEEeC
Confidence 45899999999766565432233 55677777789999999999999999974
No 21
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=8.5e-16 Score=137.26 Aligned_cols=164 Identities=12% Similarity=0.087 Sum_probs=124.0
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCC-------CCeE------------EEE--ecCcc
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPE-------LEET------------TVL--HEGFY 58 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-------~~~~------------~~~--~~~~~ 58 (225)
.|+++++++ +|.||+++.. .++|+++|++ ++.+ +.+ .....
T Consensus 248 ~p~giavdp~~g~LYvtd~~-----------------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~ 310 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYE-----------------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS 310 (496)
T ss_dssp CCCCEEECTTTCCEEEEETT-----------------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred CceEEEEcCCCCeEEEEECC-----------------CCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence 489999999 6799999987 6799999986 5554 122 23456
Q ss_pred ccceeEEecCCCEEEEEeCCCCEEEEEEecCC--CCCceeEEecc--CC------------CCCC-ceEEC-------CC
Q 047259 59 FANGVALSKDENFVVVCESWKFRCRRYWLKGP--RQGRLESFIEH--LP------------GGPD-NINLA-------PD 114 (225)
Q Consensus 59 ~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~--~~~~~~~~~~~--~~------------g~Pd-~i~~d-------~~ 114 (225)
+|.+|+++|+|+.|||+++.+++|++++.++. .+....+++.. .. ..|. +++++ ++
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~ 390 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEE 390 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCC
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCC
Confidence 79999999999999999999999999988752 12223455531 11 1477 88887 78
Q ss_pred CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECC--------------C
Q 047259 115 GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDP--------------N 180 (225)
Q Consensus 115 G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p--------------~ 180 (225)
|+|||++.. ..+|.+++++|.+....... +
T Consensus 391 g~lyVaD~~------------------------------------N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~d 434 (496)
T 3kya_A 391 YDFYFVDRL------------------------------------NFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDD 434 (496)
T ss_dssp EEEEEEEGG------------------------------------GTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCC
T ss_pred CeEEEEECC------------------------------------CCEEEEEeCCCCEEEEecccccccccCccccccCC
Confidence 999999988 66899999999776544321 1
Q ss_pred C-----CcccceeEEEEe-C-CEEEEeeCCCCeEEEEeCCCccc
Q 047259 181 A-----TYISFVTSAVEF-E-DNLYMASIQSKFVGKLPLNTPEA 217 (225)
Q Consensus 181 g-----~~~~~~t~~~~~-~-~~Lyv~~~~~~~i~~~~~~~~~~ 217 (225)
| ..+..|++++.+ + +.|||++..+++|.++.+.++..
T Consensus 435 G~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 435 GDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp EETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred CCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 2 126678888865 3 89999999999999999887654
No 22
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.70 E-value=9.5e-16 Score=131.57 Aligned_cols=159 Identities=12% Similarity=0.114 Sum_probs=123.8
Q ss_pred CCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE-ecCccccceeEEecCCCEEEEEeCCC
Q 047259 2 TNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL-HEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 2 pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
|.+|++++ +++||++|.. .++|++++.+++..+.+ ..++..|+||++++.++.||+++...
T Consensus 75 ~~~l~~d~~~~~ly~~D~~-----------------~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~ 137 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVT-----------------LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT 137 (349)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT
T ss_pred eEEEEEeccccEEEEEecc-----------------CCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCC
Confidence 56788885 6789999986 57999999875555544 45678999999999878899999999
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
++|.++++++. ..+++.......|.+|++|+ +|.||+++.+.
T Consensus 138 ~~I~~~~~dG~---~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~---------------------------------- 180 (349)
T 3v64_C 138 SRIEVANLDGA---HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------------------------------- 180 (349)
T ss_dssp TEEEEEETTSC---SCEEEECTTCSCEEEEEEETTTTEEEEEECSS----------------------------------
T ss_pred CeEEEEcCCCC---ceEEEEeCCCCCcceEEEecCcCeEEEeccCC----------------------------------
Confidence 99999999863 23344432234699999997 67899999871
Q ss_pred cceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 159 AGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 159 ~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.+.|.+++.+|+....+.. .+ +..+.+++.+ +++||+++...++|.++++++...+
T Consensus 181 -~~~I~r~~~dG~~~~~~~~-~~--~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~ 238 (349)
T 3v64_C 181 -TPRIEASSMDGSGRRIIAD-TH--LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 238 (349)
T ss_dssp -SCEEEEEETTSCSCEESCC-SS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred -CCEEEEEeCCCCCcEEEEE-CC--CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE
Confidence 2689999999987655543 12 4467777764 7999999999999999999986543
No 23
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.70 E-value=1.1e-15 Score=132.94 Aligned_cols=159 Identities=12% Similarity=0.113 Sum_probs=124.6
Q ss_pred CCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE-ecCccccceeEEecCCCEEEEEeCCC
Q 047259 2 TNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL-HEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 2 pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
|.+|++++ +++||++|.. .++|++++.+.+..+.+ ..++..|+||++++.++.||+++...
T Consensus 118 ~~gl~~d~~~~~ly~~D~~-----------------~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~ 180 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVT-----------------LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT 180 (386)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTT
T ss_pred cEEEEEecCCCeEEEEeCC-----------------CCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCC
Confidence 56788885 6789999986 57999999876555554 45678999999999888899999999
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
++|.++++++. ..+++.......|.+|++|+ +|.||+++.+.
T Consensus 181 ~~I~~~~~dg~---~~~~l~~~~l~~P~giavdp~~g~ly~td~~~---------------------------------- 223 (386)
T 3v65_B 181 SRIEVANLDGA---HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------------------------------- 223 (386)
T ss_dssp TEEEECBTTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEECSS----------------------------------
T ss_pred CeEEEEeCCCC---ceEEeecCCCCCCcEEEEEcCCCeEEEeccCC----------------------------------
Confidence 99999998863 23334432234699999996 57899999771
Q ss_pred cceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 159 AGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 159 ~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.+.|.+++++|+....+... + +..+.+++.+ +++||+++...++|.++++++...+
T Consensus 224 -~~~I~r~~~dG~~~~~~~~~-~--~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 281 (386)
T 3v65_B 224 -TPRIEASSMDGSGRRIIADT-H--LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 281 (386)
T ss_dssp -SCEEEEEETTSCSCEEEECS-S--CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE
T ss_pred -CCEEEEEeCCCCCcEEEEEC-C--CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE
Confidence 36899999999876666542 2 4457777764 7999999999999999999876543
No 24
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.69 E-value=2.7e-15 Score=126.94 Aligned_cols=159 Identities=13% Similarity=0.098 Sum_probs=121.3
Q ss_pred CCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC----CeEEEEe-cCccccceeEEecCCCEEEEE
Q 047259 2 TNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL----EETTVLH-EGFYFANGVALSKDENFVVVC 75 (225)
Q Consensus 2 pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~----~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~ 75 (225)
|.++++++ +++||++|.. .++|++++.++ ...+.+. .++..|.||++++.++.||++
T Consensus 32 p~g~~~d~~~~~ly~~D~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~ 94 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLS-----------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWT 94 (316)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred eEEEEEEeCCCEEEEEECC-----------------CCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEE
Confidence 67889997 4689999986 57999999864 2333333 467899999999877789999
Q ss_pred eCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhcc
Q 047259 76 ESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIP 154 (225)
Q Consensus 76 ~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~ 154 (225)
+...++|.++++++. ..+++.......|.+|++|+ +|+||+++.+.
T Consensus 95 d~~~~~I~~~~~~g~---~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~------------------------------ 141 (316)
T 1ijq_A 95 DSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------------------------------ 141 (316)
T ss_dssp ETTTTEEEEEETTSS---SEEEEEECTTCCEEEEEEETTTTEEEEEECSS------------------------------
T ss_pred ECCCCEEEEEeCCCC---ceEEEEECCCCCcceEEeCCCCCEEEEEccCC------------------------------
Confidence 999999999998763 33444432334799999997 67899998761
Q ss_pred CCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 155 LGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 155 ~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.+.|.+++++|+....+... . +..+.+++.+ +++||+++...++|.++++++...+
T Consensus 142 -----~~~I~~~~~dG~~~~~~~~~--~-~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~ 199 (316)
T 1ijq_A 142 -----PAKIKKGGLNGVDIYSLVTE--N-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 199 (316)
T ss_dssp -----SCEEEEEETTSCCEEEEECS--S-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred -----CCeEEEEcCCCCCeEEEEEC--C-CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE
Confidence 36899999999877666532 1 4567777765 7999999999999999999875443
No 25
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=3.2e-15 Score=123.04 Aligned_cols=154 Identities=10% Similarity=0.149 Sum_probs=115.9
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++++++++|++|+++.. .++|+++|.+...+..+. ..+..|++|+++++|+ |||+++.
T Consensus 122 ~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~ 183 (286)
T 1q7f_A 122 HPRGVTVDNKGRIIVVECK-----------------VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR 183 (286)
T ss_dssp CEEEEEECTTSCEEEEETT-----------------TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG
T ss_pred CceEEEEeCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC
Confidence 3789999999999999876 578999998633333333 3467899999999986 9999999
Q ss_pred CCEEEEEEecCCCCCceeEEecc-CCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFIEH-LPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~~-~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
.++|++|+.++. ....+... ....|.+|++|++|++|+++..
T Consensus 184 ~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~---------------------------------- 226 (286)
T 1q7f_A 184 AHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNH---------------------------------- 226 (286)
T ss_dssp GTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECS----------------------------------
T ss_pred CCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCC----------------------------------
Confidence 999999998652 22233211 1246999999999999999976
Q ss_pred Ccc-eEEEEECCCCcEEEEEECCCCCcccceeEEEE-eCCEEEEeeCCCCeEEEEeCCC
Q 047259 158 DAG-ARIVKVDTHGKIIMDFNDPNATYISFVTSAVE-FEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 158 ~~~-~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~-~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
. +.|.+++++|+.+..+..... ...+..++. .+|+||+++. +++|.+++...
T Consensus 227 --~~~~i~~~~~~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~~~ 280 (286)
T 1q7f_A 227 --NNFNLTIFTQDGQLISALESKVK--HAQCFDVALMDDGSVVLASK-DYRLYIYRYVQ 280 (286)
T ss_dssp --SSCEEEEECTTSCEEEEEEESSC--CSCEEEEEEETTTEEEEEET-TTEEEEEECSC
T ss_pred --CCEEEEEECCCCCEEEEEcccCC--CCcceeEEECCCCcEEEECC-CCeEEEEEccc
Confidence 3 389999999998888765322 223445554 4789999974 78999998754
No 26
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=7.5e-16 Score=130.34 Aligned_cols=189 Identities=17% Similarity=0.209 Sum_probs=121.1
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCC--eEEEEe---------cCccccceeEEec-C
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELE--ETTVLH---------EGFYFANGVALSK-D 68 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--~~~~~~---------~~~~~pnGi~~~~-d 68 (225)
.|++|+++++|+||+++.. .++|++++.+.. .+..+. ..+..|+||+++| +
T Consensus 92 ~p~gia~d~~g~l~v~d~~-----------------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~ 154 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVA-----------------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPST 154 (329)
T ss_dssp SEEEEEECTTSCEEEEETT-----------------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTT
T ss_pred CceEEEECCCCCEEEEECC-----------------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCC
Confidence 4789999999999999987 578999998633 233332 3355899999999 5
Q ss_pred CCEEEEEeC-CCCEEEEEEecCCCCCceeEEeccC------C---CCCCceEECCC-CCEEEEeecCC-chhhhhhhcCh
Q 047259 69 ENFVVVCES-WKFRCRRYWLKGPRQGRLESFIEHL------P---GGPDNINLAPD-GSFWVALIKMN-QTGVRAIQSCP 136 (225)
Q Consensus 69 g~~Lyv~~~-~~~~I~~~~~~~~~~~~~~~~~~~~------~---g~Pd~i~~d~~-G~l~v~~~~~~-~~~~~~~~~~~ 136 (225)
|+ |||+++ .+++|++|+.++. ....+.... + ..|.+|++|++ |+|||++.... ...++.- ..
T Consensus 155 g~-lyv~d~~~~~~I~~~~~~g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~--~G 228 (329)
T 3fvz_A 155 GA-VFVSDGYCNSRIVQFSPSGK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD--TK 228 (329)
T ss_dssp CC-EEEEECSSCCEEEEECTTSC---EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT--TC
T ss_pred Ce-EEEEeCCCCCeEEEEcCCCC---EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC--CC
Confidence 54 999997 7999999997653 122222110 1 24999999998 89999997743 1111110 00
Q ss_pred hHHHHH-----Hh-------hhhhhh------hhccCCCCcceEEEEEC-CCCcEEEEEECCCCCcccceeEEEEe-CCE
Q 047259 137 DKWKLL-----QA-------YPELIN------LLIPLGNDAGARIVKVD-THGKIIMDFNDPNATYISFVTSAVEF-EDN 196 (225)
Q Consensus 137 ~~r~~~-----~~-------~p~~~~------~~~~~~~~~~~~V~~~d-~~G~~~~~~~~p~g~~~~~~t~~~~~-~~~ 196 (225)
.+.+.+ .. .| .+. .+.+... ...|.+++ .+|+++..+....+. +..+..++.+ +|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~--~~~v~~~~~~~g~~~~~~~~~~~~-~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 229 EFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQE--PVQGFVMNFSSGEIIDVFKPVRKH-FDMPHDIVASEDGT 304 (329)
T ss_dssp CEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSC--CCCEEEEETTTCCEEEEECCSSSC-CSSEEEEEECTTSE
T ss_pred cEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCC--CcEEEEEEcCCCeEEEEEcCCCCc-cCCeeEEEECCCCC
Confidence 000000 00 01 110 0011122 34677777 458888777532232 5567777764 689
Q ss_pred EEEeeCCCCeEEEEeCCCcc
Q 047259 197 LYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 197 Lyv~~~~~~~i~~~~~~~~~ 216 (225)
|||++..+++|.+++++++.
T Consensus 305 lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EEEEESSSCCEEEEEEEECS
T ss_pred EEEEECCCCEEEEEeCCccc
Confidence 99999999999999987643
No 27
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=5e-16 Score=132.35 Aligned_cols=154 Identities=15% Similarity=0.145 Sum_probs=109.0
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC-----------------------
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG----------------------- 56 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~----------------------- 56 (225)
+||++++++ +|.+|+||.+.. ..+.|+.+|..+++.....++
T Consensus 121 ~~~~v~vd~~~g~~yvtd~~~~--------------~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~ 186 (343)
T 2qe8_A 121 FVNDLAVDLIHNFVYISDPAPD--------------DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQP 186 (343)
T ss_dssp CCCEEEEETTTTEEEEEECCSG--------------GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECT
T ss_pred ccceEEEecCCCEEEEEcCccC--------------CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccC
Confidence 579999997 478999998410 145667777655554443221
Q ss_pred -------ccccceeEEecCCCEEEEEeCCCCEEEEEEec---CCCCCceeEEec----cCCCCCCceEECCCCCEEEEee
Q 047259 57 -------FYFANGVALSKDENFVVVCESWKFRCRRYWLK---GPRQGRLESFIE----HLPGGPDNINLAPDGSFWVALI 122 (225)
Q Consensus 57 -------~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~---~~~~~~~~~~~~----~~~g~Pd~i~~d~~G~l~v~~~ 122 (225)
...||||+++|||+.||+++...++|++++.+ ...++..+++.. ...+.|+||++|++|+||+++.
T Consensus 187 ~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~ 266 (343)
T 2qe8_A 187 DGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDL 266 (343)
T ss_dssp TSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEG
T ss_pred CCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEcc
Confidence 12489999999999999999999999999864 111122111110 1234799999999999999998
Q ss_pred cCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEE-eCCEEEEe
Q 047259 123 KMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVE-FEDNLYMA 200 (225)
Q Consensus 123 ~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~-~~~~Lyv~ 200 (225)
. .++|.++|+ +|++......|. +..++.++. .+++|||+
T Consensus 267 ~------------------------------------~~~V~~~d~~~G~~~~~~~~~~---~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 267 A------------------------------------HSAIGVITSADRAYKLLVTDEK---LSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp G------------------------------------GTEEEEEETTTTEEEEEEECGG---GSCEEEEEECTTSCEEEE
T ss_pred C------------------------------------CCeEEEEECCCCCEEEEEECCc---eecCCeeEECCCCcEEEE
Confidence 7 678999999 898766666542 446777776 47899999
Q ss_pred eCCCCeE
Q 047259 201 SIQSKFV 207 (225)
Q Consensus 201 ~~~~~~i 207 (225)
+...+++
T Consensus 308 ~~~~~~~ 314 (343)
T 2qe8_A 308 CNQLHHS 314 (343)
T ss_dssp ECCGGGS
T ss_pred eCccccc
Confidence 8765544
No 28
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=1.4e-15 Score=123.80 Aligned_cols=156 Identities=16% Similarity=0.164 Sum_probs=116.8
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE-ecCccccceeEEecCCCEEEEEeCCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL-HEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
.|++++++++|+||+++.. .+.|++++..+...... ...+..|++|+++++|+ |||++...
T Consensus 109 ~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~ 170 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRG-----------------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTDN 170 (270)
T ss_dssp SEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGGG
T ss_pred CCcceEECCCCCEEEEECC-----------------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEECCC
Confidence 3678999999999999875 57899998654433322 24456899999999997 99999999
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
++|++|+.++. ............|.+|++|++|++|+++..
T Consensus 171 ~~i~~~~~~~~---~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~------------------------------------ 211 (270)
T 1rwi_B 171 NRVVKLEAESN---NQVVLPFTDITAPWGIAVDEAGTVYVTEHN------------------------------------ 211 (270)
T ss_dssp TEEEEECTTTC---CEEECCCSSCCSEEEEEECTTCCEEEEETT------------------------------------
T ss_pred CEEEEEecCCC---ceEeecccCCCCceEEEECCCCCEEEEECC------------------------------------
Confidence 99999998753 111111111146899999999999999976
Q ss_pred ceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCCcc
Q 047259 160 GARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 160 ~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.+.|.+++++|+....+.. .+ +..+..++.. +|+||+++..+++|.+++++.+.
T Consensus 212 ~~~v~~~~~~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 212 TNQVVKLLAGSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp TSCEEEECTTCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCcEEEEcCCCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 5578999999876544332 12 3456777664 68899999999999999988764
No 29
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.66 E-value=5.9e-15 Score=125.23 Aligned_cols=158 Identities=18% Similarity=0.161 Sum_probs=122.2
Q ss_pred CcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCe--EEEEecCccccceeEEecCCCEEEEEeCCC
Q 047259 3 NDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEE--TTVLHEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 3 ndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~--~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
-+|++++ +|+||++|.. .++|++++.+++. ...+..++..|+||++++.++.||+++...
T Consensus 38 ~~ld~d~~~~~lyw~D~~-----------------~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~ 100 (318)
T 3sov_A 38 AAVDFVFSHGLIYWSDVS-----------------EEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSET 100 (318)
T ss_dssp EEEEEEGGGTEEEEEETT-----------------TTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeCCCEEEEEECC-----------------CCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCC
Confidence 3566676 5789999987 5789999987442 234556788999999998777899999999
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
++|.++++++. ..+++.......|.+|++|+ .|.||+++.+.
T Consensus 101 ~~I~~~~~dG~---~~~~l~~~~~~~P~giavdp~~g~ly~td~~~---------------------------------- 143 (318)
T 3sov_A 101 NRIEVSNLDGS---LRKVLFWQELDQPRAIALDPSSGFMYWTDWGE---------------------------------- 143 (318)
T ss_dssp TEEEEEETTSC---SCEEEECSSCSSEEEEEEEGGGTEEEEEECSS----------------------------------
T ss_pred CEEEEEECCCC---cEEEEEeCCCCCccEEEEeCCCCEEEEEecCC----------------------------------
Confidence 99999999863 23344432334699999997 58899999762
Q ss_pred cceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 159 AGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 159 ~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.+.|.+++++|+....+... + +..+.+++.+ +++||+++...++|.++++++...+
T Consensus 144 -~~~I~r~~~dG~~~~~~~~~-~--l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 201 (318)
T 3sov_A 144 -VPKIERAGMDGSSRFIIINS-E--IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ 201 (318)
T ss_dssp -SCEEEEEETTSCSCEEEECS-S--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred -CCEEEEEEcCCCCeEEEEEC-C--CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE
Confidence 46899999999876666532 2 4567777765 7999999999999999999976544
No 30
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=1e-14 Score=122.43 Aligned_cols=167 Identities=22% Similarity=0.254 Sum_probs=122.4
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
|++++++++|++|+++.... .....+.|++++.++++++.+......|++|+++|||+.||++++..++
T Consensus 137 ~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~ 205 (333)
T 2dg1_A 137 IDDMVFDSKGGFYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR 205 (333)
T ss_dssp EEEEEECTTSCEEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred ccceEECCCCCEEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe
Confidence 68899999999999987511 1123678999998766777766667789999999999999999998899
Q ss_pred EEEEEecC--CCCCc--eeEEeccCC--CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 82 CRRYWLKG--PRQGR--LESFIEHLP--GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 82 I~~~~~~~--~~~~~--~~~~~~~~~--g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
|++|+++. ..... ...+.. .. ..|+++++|++|++|++...
T Consensus 206 i~~~d~~~~g~~~~~~~~~~~~~-~~~~~~~~~i~~d~~G~l~v~~~~-------------------------------- 252 (333)
T 2dg1_A 206 LHRIALEDDGVTIQPFGATIPYY-FTGHEGPDSCCIDSDDNLYVAMYG-------------------------------- 252 (333)
T ss_dssp EEEEEECTTSSSEEEEEEEEEEE-CCSSSEEEEEEEBTTCCEEEEEET--------------------------------
T ss_pred EEEEEecCCCcCcccccceEEEe-cCCCCCCCceEECCCCCEEEEEcC--------------------------------
Confidence 99999853 11111 012221 22 36999999999999999876
Q ss_pred CCCcceEEEEECCCCcEEEEEECCCCC--cccceeEEEEe--CCEEEEeeCCC-----CeEEEEeCCCcc
Q 047259 156 GNDAGARIVKVDTHGKIIMDFNDPNAT--YISFVTSAVEF--EDNLYMASIQS-----KFVGKLPLNTPE 216 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~~~~~p~g~--~~~~~t~~~~~--~~~Lyv~~~~~-----~~i~~~~~~~~~ 216 (225)
.+.|.++|++|+.+..+..+... .+..++.++.. +++||+++... ..|.+++.....
T Consensus 253 ----~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~~g 318 (333)
T 2dg1_A 253 ----QGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKG 318 (333)
T ss_dssp ----TTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSSCB
T ss_pred ----CCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecccCc
Confidence 46899999999988888765320 01234555542 46999998763 488888876544
No 31
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.65 E-value=6.8e-15 Score=128.53 Aligned_cols=159 Identities=13% Similarity=0.101 Sum_probs=121.7
Q ss_pred CCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC----CeEEEE-ecCccccceeEEecCCCEEEEE
Q 047259 2 TNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL----EETTVL-HEGFYFANGVALSKDENFVVVC 75 (225)
Q Consensus 2 pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~----~~~~~~-~~~~~~pnGi~~~~dg~~Lyv~ 75 (225)
|.+|++++ +++||++|.. .++|++++.+. ...+.+ ..++..|.||++++.++.||++
T Consensus 114 ~~~l~~d~~~~~lywsD~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~ 176 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLS-----------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWT 176 (400)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred ceEEeeeeccCceEEEecC-----------------CCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEE
Confidence 56788886 6789999987 56899998763 123333 4578899999999977789999
Q ss_pred eCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhcc
Q 047259 76 ESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIP 154 (225)
Q Consensus 76 ~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~ 154 (225)
+...++|.++++++. ..++++......|.+|++|+ .|.||+++++.
T Consensus 177 d~~~~~I~~~~~~g~---~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~------------------------------ 223 (400)
T 3p5b_L 177 DSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------------------------------ 223 (400)
T ss_dssp ETTTTEEEEECTTTC---SEEEEEECSSCCEEEEEEETTTTEEEEEECSS------------------------------
T ss_pred ECCCCeEEEEeCCCC---ceEEEEeCCCCCcceEEEecccCeEEEEeCCC------------------------------
Confidence 999999999999863 33444432334699999998 67899999762
Q ss_pred CCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 155 LGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 155 ~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.+.|.+++.+|+....+... + +..+.+++.+ +++||+++...++|.++++++...+
T Consensus 224 -----~~~I~~~~~dG~~~~~~~~~-~--l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 281 (400)
T 3p5b_L 224 -----PAKIKKGGLNGVDIYSLVTE-N--IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 281 (400)
T ss_dssp -----SCCEEEEETTSCSCEEEECS-S--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCE
T ss_pred -----CCEEEEEeCCCCccEEEEEC-C--CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccE
Confidence 35799999999876666542 2 4567777765 7999999999999999999886543
No 32
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.65 E-value=1.1e-14 Score=137.17 Aligned_cols=160 Identities=13% Similarity=0.086 Sum_probs=123.3
Q ss_pred CCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCC----eEEEEe-cCccccceeEEecCCCEEEEE
Q 047259 2 TNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELE----ETTVLH-EGFYFANGVALSKDENFVVVC 75 (225)
Q Consensus 2 pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~----~~~~~~-~~~~~pnGi~~~~dg~~Lyv~ 75 (225)
|.+|+++. +++||++|.. .++|++++.+.. ..+.++ .++..|+|||++..++.|||+
T Consensus 426 ~~gl~~d~~~~~lY~sD~~-----------------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~t 488 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLS-----------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWT 488 (791)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred eEEEeecccCCeeEEeecc-----------------ceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEE
Confidence 45778887 6789999987 568888887631 233444 478999999999998889999
Q ss_pred eCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC-CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhcc
Q 047259 76 ESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD-GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIP 154 (225)
Q Consensus 76 ~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~-G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~ 154 (225)
++..++|.++++++. ..++++......|.+|++|+. |+||+++++.
T Consensus 489 D~~~~~I~v~~ldG~---~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~------------------------------ 535 (791)
T 3m0c_C 489 DSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------------------------------ 535 (791)
T ss_dssp ETTTTEEEEEETTSS---SEEEEEECTTCCEEEEEEETTTTEEEEEECSS------------------------------
T ss_pred ecCCCeEEEEeCCCC---eEEEEEeCCCCCcceEEEecCCCCEEEecCCC------------------------------
Confidence 999999999999863 344454323346999999985 8899999872
Q ss_pred CCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCccccc
Q 047259 155 LGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAEL 219 (225)
Q Consensus 155 ~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~~ 219 (225)
...|.+++.+|+...++... + +..+.+++.+ +++||+++...++|.++++++...+.
T Consensus 536 -----~~~I~~~~~dG~~~~~lv~~-~--l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~ 594 (791)
T 3m0c_C 536 -----PAKIKKGGLNGVDIYSLVTE-N--IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 594 (791)
T ss_dssp -----SCEEEEEETTSCCEEEEECS-S--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred -----CCeEEEEecCCCceEEEEeC-C--CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEE
Confidence 36899999999877666542 2 4567887765 79999999999999999998876543
No 33
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.64 E-value=2.5e-15 Score=139.97 Aligned_cols=155 Identities=15% Similarity=0.129 Sum_probs=119.3
Q ss_pred CCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCC
Q 047259 2 TNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 2 pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
|++|+++. .|+||++|.. .++|++++.+.+..+.++ .++..|+||+++|+++.||+++.+.
T Consensus 455 P~glavD~~~g~LY~tD~~-----------------~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~ 517 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT 517 (699)
T ss_dssp CCCEECCCSSSBCEECCTT-----------------TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS
T ss_pred cceEEEEeeCCcEEEEecc-----------------CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC
Confidence 78999994 6789999886 568999998755555554 4578999999999888899999876
Q ss_pred -CEEEEEEecCCCCCceeEEeccCCCCCCceEECCC-CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 80 -FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD-GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 80 -~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~-G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
++|+++++++. ..++++......|+||++|++ ++||+++..
T Consensus 518 ~~~I~~~~~dG~---~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~---------------------------------- 560 (699)
T 1n7d_A 518 PAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSK---------------------------------- 560 (699)
T ss_dssp SCCEEBCCSSSC---CCCEESCSSCSSCCCEEECTTTCCEEEEETT----------------------------------
T ss_pred CCeEEEEeCCCC---CeeEEEeCCCCCccEEEEeccCCEEEEEecC----------------------------------
Confidence 89999998863 233343222347999999975 789999977
Q ss_pred CcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCC
Q 047259 158 DAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 158 ~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~ 213 (225)
...|.+++.+|.....+....+. +..+.+++.++++||++++.+++|.+++..
T Consensus 561 --~~~I~~~d~dG~~~~~~~~~~~~-~~~P~glavd~~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 561 --LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp --TTEEEEECSSSSCCEEECCCSSS-CSSCCCCEEETTEEEEECSTTTCEEEEETT
T ss_pred --CCeEEEEccCCCceEEEEecCCc-CCCceEeEEECCEEEEEeCCCCeEEEEEcc
Confidence 56899999998765555432222 445666677788999999999999999864
No 34
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.63 E-value=4.1e-14 Score=118.64 Aligned_cols=155 Identities=14% Similarity=0.203 Sum_probs=114.4
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCC-
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWK- 79 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~- 79 (225)
+|++++++++|+||++|.. .++|+++|++ ++..........|+||++++||+ |||++...
T Consensus 33 ~pegia~~~~g~lyv~d~~-----------------~~~I~~~d~~-g~~~~~~~~~~~p~gia~~~dG~-l~vad~~~~ 93 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHE-----------------VGEIVSITPD-GNQQIHATVEGKVSGLAFTSNGD-LVATGWNAD 93 (306)
T ss_dssp CEEEEEECTTSCEEEEETT-----------------TTEEEEECTT-CCEEEEEECSSEEEEEEECTTSC-EEEEEECTT
T ss_pred CcceEEECCCCCEEEEeCC-----------------CCeEEEECCC-CceEEEEeCCCCceeEEEcCCCc-EEEEeccCC
Confidence 5789999999999999976 5799999987 45555544456899999999998 99999764
Q ss_pred -CEEEEEEecCCCCCceeEEecc-CCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 80 -FRCRRYWLKGPRQGRLESFIEH-LPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 80 -~~I~~~~~~~~~~~~~~~~~~~-~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
.+|++++..+ +..+.+... ....|++++..+++++|+++..
T Consensus 94 ~~~v~~~d~~~---g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~---------------------------------- 136 (306)
T 2p4o_A 94 SIPVVSLVKSD---GTVETLLTLPDAIFLNGITPLSDTQYLTADSY---------------------------------- 136 (306)
T ss_dssp SCEEEEEECTT---SCEEEEEECTTCSCEEEEEESSSSEEEEEETT----------------------------------
T ss_pred cceEEEEcCCC---CeEEEEEeCCCccccCcccccCCCcEEEEECC----------------------------------
Confidence 4699988654 344444432 1236889998888889998865
Q ss_pred CcceEEEEECCCCc-EEEEEE-------CCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 047259 158 DAGARIVKVDTHGK-IIMDFN-------DPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 158 ~~~~~V~~~d~~G~-~~~~~~-------~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+.|+++|+++. ...... .+.+. +..+..+.+++++||+++...++|.++++++
T Consensus 137 --~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~-~~~pngis~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 137 --RGAIWLIDVVQPSGSIWLEHPMLARSNSESV-FPAANGLKRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp --TTEEEEEETTTTEEEEEEECGGGSCSSTTCC-SCSEEEEEEETTEEEEEETTTTEEEEEEBCT
T ss_pred --CCeEEEEeCCCCcEeEEEECCccccccccCC-CCcCCCcCcCCCEEEEEeCCCCEEEEEEeCC
Confidence 568999998742 211111 11222 4456667667889999999999999999975
No 35
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.62 E-value=2.3e-14 Score=131.94 Aligned_cols=153 Identities=12% Similarity=0.164 Sum_probs=121.1
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++|+++. .|+||+||.. .++|.+++.+.+..+.+. ..+..|++|+++|.++.||+++.+
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~-----------------~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g 143 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTG-----------------TNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG 143 (628)
T ss_dssp CCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECS
T ss_pred CcceEEEEeCCCEEEEEECC-----------------CCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCC
Confidence 389999996 4689999997 579999998744444444 778999999999977789999987
Q ss_pred -CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC-CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 -KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD-GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 -~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~-G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
.++|+|++++|. ..+++.+. -..|.||++|++ ++||+++..
T Consensus 144 ~~~~I~r~~~dG~---~~~~l~~~-~~~P~GlalD~~~~~LY~aD~~--------------------------------- 186 (628)
T 4a0p_A 144 GKPKIDRAAMDGS---ERTTLVPN-VGRANGLTIDYAKRRLYWTDLD--------------------------------- 186 (628)
T ss_dssp SSCEEEEEETTSC---SCEEEECS-CSSEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CCCEEEEEeCCCC---ceEEEECC-CCCcceEEEccccCEEEEEECC---------------------------------
Confidence 789999999873 34455532 346999999985 789999977
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
...|.+++.+|...+.+... +..+.+++..+++||++++.+++|.+++..+
T Consensus 187 ---~~~I~~~d~dG~~~~v~~~~----l~~P~glav~~~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 187 ---TNLIESSNMLGLNREVIADD----LPHPFGLTQYQDYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp ---TTEEEEEETTSCSCEEEEEC----CSCEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred ---CCEEEEEcCCCCceEEeecc----CCCceEEEEECCEEEEecCCCCEEEEEECCC
Confidence 56899999998655555431 3456677778899999999999999998643
No 36
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.62 E-value=1.8e-14 Score=132.45 Aligned_cols=157 Identities=14% Similarity=0.156 Sum_probs=121.9
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++++++. .++||+||+. .++|.+++.+....+.+. +++..|++|+++|..+.||+++.+
T Consensus 393 ~p~GlAvD~~~~~lY~tD~~-----------------~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g 455 (619)
T 3s94_A 393 HPDGIAVDWVARNLYWTDTG-----------------TDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWG 455 (619)
T ss_dssp CCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECS
T ss_pred CcCceEEecccCcEEEEeCC-----------------CCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCC
Confidence 489999996 6789999987 568888887644444444 578999999999987789999987
Q ss_pred C-CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 K-FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 ~-~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
. .+|.|++++|. ..+++....-..|.||++|. +++||+++..
T Consensus 456 ~~~~I~r~~~dG~---~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~--------------------------------- 499 (619)
T 3s94_A 456 EIPKIERAALDGS---DRVVLVNTSLGWPNGLALDYDEGKIYWGDAK--------------------------------- 499 (619)
T ss_dssp SSCEEEEEETTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CCCEEEEEccCCC---ccEEEEeCCCCCCeeeEEcccCCEEEEEECC---------------------------------
Confidence 5 79999999873 33444433334799999997 6789999987
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCCcc
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.+.|.+++.+|....++... + +..+.+++..+++||++++..++|.+++..+..
T Consensus 500 ---~~~I~~~~~dG~~~~~~~~~-~--l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 500 ---TDKIEVMNTDGTGRRVLVED-K--IPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp ---TTEEEEEESSSCCCEEEEEC-C--CCSSCCEEEETTEEEEECTTSSCEEEEESSSCC
T ss_pred ---CCEEEEEecCCCceEEEecc-C--CCCcEEEEEECCEEEEeecCCCeEEEEEcCCCc
Confidence 56899999998766555321 1 334556667788999999999999999887653
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.62 E-value=4.3e-14 Score=114.87 Aligned_cols=157 Identities=15% Similarity=0.198 Sum_probs=114.9
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
.|.+|+++++|+||+++. .+.|+++|.+++...... .+...|++|+++++|+ |||++...
T Consensus 68 ~p~~i~~~~~g~l~v~~~------------------~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~ 128 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF------------------NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRGN 128 (270)
T ss_dssp SCCCEEECTTCCEEEEET------------------TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-EEEEEGGG
T ss_pred CcceeEECCCCCEEEEcC------------------CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-EEEEECCC
Confidence 377899999999999976 258899998755444332 4457899999999997 99999999
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
++|++++..+. ............|.+|++|++|++|+++..
T Consensus 129 ~~i~~~~~~~~---~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~------------------------------------ 169 (270)
T 1rwi_B 129 NRVVKLAAGSK---TQTVLPFTGLNDPDGVAVDNSGNVYVTDTD------------------------------------ 169 (270)
T ss_dssp TEEEEECTTCC---SCEECCCCSCCSCCCEEECTTCCEEEEEGG------------------------------------
T ss_pred CEEEEEECCCc---eeEeeccccCCCceeEEEeCCCCEEEEECC------------------------------------
Confidence 99999964321 111111111236999999999999999876
Q ss_pred ceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 160 GARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 160 ~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.+.|.++++++........ .+ +..+..++.+ +|+||+++..+++|.+++.++....
T Consensus 170 ~~~i~~~~~~~~~~~~~~~-~~--~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLPF-TD--ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST 226 (270)
T ss_dssp GTEEEEECTTTCCEEECCC-SS--CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE
T ss_pred CCEEEEEecCCCceEeecc-cC--CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce
Confidence 5689999998765433322 11 2456667664 6799999999999999998775433
No 38
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.62 E-value=5.9e-14 Score=115.43 Aligned_cols=156 Identities=15% Similarity=0.232 Sum_probs=116.3
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec------CccccceeEEe-cCCCEEE
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE------GFYFANGVALS-KDENFVV 73 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~------~~~~pnGi~~~-~dg~~Ly 73 (225)
.|.+++++++|++|+++.. .++|.++|.+...+..+.. .+..|.+|+++ +++ .||
T Consensus 31 ~p~~v~~~~~g~l~v~~~~-----------------~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~ 92 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTN-----------------NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSG-DII 92 (286)
T ss_dssp CEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTT-EEE
T ss_pred CCceEEECCCCCEEEEECC-----------------CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCC-eEE
Confidence 3789999999999999875 5789999987333333321 24679999995 565 599
Q ss_pred EEeCC-CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhh
Q 047259 74 VCESW-KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLL 152 (225)
Q Consensus 74 v~~~~-~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~ 152 (225)
|++.. .++|.+|+.++. ....+.......|.++++|++|++|+++..
T Consensus 93 v~~~~~~~~i~~~d~~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----------------------------- 140 (286)
T 1q7f_A 93 VTERSPTHQIQIYNQYGQ---FVRKFGATILQHPRGVTVDNKGRIIVVECK----------------------------- 140 (286)
T ss_dssp EEECGGGCEEEEECTTSC---EEEEECTTTCSCEEEEEECTTSCEEEEETT-----------------------------
T ss_pred EEcCCCCCEEEEECCCCc---EEEEecCccCCCceEEEEeCCCCEEEEECC-----------------------------
Confidence 99975 789999986542 222232112246899999999999999866
Q ss_pred ccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCCc
Q 047259 153 IPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 153 ~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.|.+++++|+.+..+..+.. +..+..++.+ +++||+++...++|.+++..+.
T Consensus 141 -------~~~i~~~~~~g~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 195 (286)
T 1q7f_A 141 -------VMRVIIFDQNGNVLHKFGCSKH--LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ 195 (286)
T ss_dssp -------TTEEEEECTTSCEEEEEECTTT--CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC
T ss_pred -------CCEEEEEcCCCCEEEEeCCCCc--cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC
Confidence 5689999999998887765322 3456667654 6899999999999999998664
No 39
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.62 E-value=4.2e-14 Score=130.03 Aligned_cols=160 Identities=18% Similarity=0.159 Sum_probs=123.1
Q ss_pred CCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCe--EEEEecCccccceeEEecCCCEEEEEeCC
Q 047259 2 TNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEE--TTVLHEGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 2 pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~--~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
|-+|++++ +|+||+||.. .++|++++.+... ...+..++..|+|||++..++.||+++..
T Consensus 42 ~~~ld~~~~~~~ly~sD~~-----------------~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~ 104 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVS-----------------EEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE 104 (619)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eEEEEEEeCCCEEEEEECC-----------------CCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCC
Confidence 45778887 6789999987 5789999986332 23445677899999999988889999999
Q ss_pred CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC-CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD-GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~-G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
.++|.+++++|. ..+++.......|.+|++|+. |.||+++++.
T Consensus 105 ~~~I~v~~~dG~---~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~--------------------------------- 148 (619)
T 3s94_A 105 TNRIEVSNLDGS---LRKVLFWQELDQPRAIALDPSSGFMYWTDWGE--------------------------------- 148 (619)
T ss_dssp TTEEEEEETTSC---SCEEEECSSCSCCCCEEEETTTTEEEEEECSS---------------------------------
T ss_pred CCEEEEEECCCC---CEEEEEeCCCCCCceEEEecCCCeEEEeccCC---------------------------------
Confidence 999999999873 333444323346999999985 8899999772
Q ss_pred CcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCccccc
Q 047259 158 DAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAEL 219 (225)
Q Consensus 158 ~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~~ 219 (225)
.+.|.+.+.+|+....+.... +..+++++.+ +++||+++...++|.++++++...+.
T Consensus 149 --~~~I~r~~~dG~~~~~l~~~~---~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~ 207 (619)
T 3s94_A 149 --VPKIERAGMDGSSRFIIINSE---IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA 207 (619)
T ss_dssp --SCEEEEEETTSCSCEEEECSS---CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-
T ss_pred --CCEEEEEECCCCceEEEEeCC---CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEE
Confidence 468999999998766665422 4568888765 79999999999999999999866543
No 40
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=6.8e-14 Score=114.77 Aligned_cols=153 Identities=16% Similarity=0.269 Sum_probs=117.2
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cCccccceeEEecCCCEEEEEeCCC
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
|++++++++|++|+++.. .+.|++++++ +++.... .....|++|+++++|+ ||+++...
T Consensus 106 ~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~ 166 (300)
T 2qc5_A 106 PYGITEGLNGDIWFTQLN-----------------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQN 166 (300)
T ss_dssp EEEEEECSTTCEEEEETT-----------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT
T ss_pred CccceECCCCCEEEEccC-----------------CCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCC
Confidence 678999999999999875 5689999987 7665442 2467899999999998 99999988
Q ss_pred CEEEEEEecCCCCCceeEEec-cCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 80 FRCRRYWLKGPRQGRLESFIE-HLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~-~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
++|++++.++ ....+.. .....|.++++|++|+||++...
T Consensus 167 ~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~----------------------------------- 207 (300)
T 2qc5_A 167 NSIGRITNTG----KLEEYPLPTNAAAPVGITSGNDGALWFVEIM----------------------------------- 207 (300)
T ss_dssp TEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEETT-----------------------------------
T ss_pred CeEEEECCCC----cEEEeeCCCCCCCcceEEECCCCCEEEEccC-----------------------------------
Confidence 9999998843 2322321 12236899999999999999876
Q ss_pred cceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCCcc
Q 047259 159 AGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 159 ~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.+.|.+++++|+... +..+.+ ...+..++.+ +|+||+++...+.|.+++..+..
T Consensus 208 -~~~i~~~~~~g~~~~-~~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~ 262 (300)
T 2qc5_A 208 -GNKIGRITTTGEISE-YDIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITNDNTI 262 (300)
T ss_dssp -TTEEEEECTTCCEEE-EECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECTTSCE
T ss_pred -CCEEEEEcCCCcEEE-EECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECCCCcE
Confidence 568999999888754 444332 3456666654 68999999999999999986543
No 41
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.61 E-value=3.1e-14 Score=125.64 Aligned_cols=155 Identities=12% Similarity=0.062 Sum_probs=116.2
Q ss_pred CCCcEEEcCC---CcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeC
Q 047259 1 FTNDVIEASD---GSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCES 77 (225)
Q Consensus 1 ~pndv~~~~d---G~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~ 77 (225)
.|++|+++++ |+||++|.. ++|+++|+.+++++.+...+..|+||+++++|+ |||++.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~------------------~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~ 200 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR------------------DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDD 200 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT------------------SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEEC
T ss_pred CCceEEEccccCCCEEEEEeCC------------------CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcC
Confidence 4899999985 899999873 489999997799998888888999999999999 999997
Q ss_pred CC----CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhh
Q 047259 78 WK----FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLL 152 (225)
Q Consensus 78 ~~----~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~ 152 (225)
.. ..++.+...+.... ...+. ....|.++++|+ +|+|||++..
T Consensus 201 ~~~~~~~gv~~~~~~~~~~~-~~~~~--~~~~P~giavd~~~G~lyv~d~~----------------------------- 248 (433)
T 4hw6_A 201 QSSDTNTGIYLFTRASGFTE-RLSLC--NARGAKTCAVHPQNGKIYYTRYH----------------------------- 248 (433)
T ss_dssp CSCTTSEEEEEECGGGTTCC-EEEEE--ECSSBCCCEECTTTCCEEECBTT-----------------------------
T ss_pred CCCcccceEEEEECCCCeec-ccccc--ccCCCCEEEEeCCCCeEEEEECC-----------------------------
Confidence 53 34666765543211 12222 234699999999 8999999977
Q ss_pred ccCCCCcceEEEEECCC-CcE-EEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcc
Q 047259 153 IPLGNDAGARIVKVDTH-GKI-IMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 153 ~~~~~~~~~~V~~~d~~-G~~-~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.++|.+++++ |++ ...+..... .....++.+ +++|||++..+++|.+++++...
T Consensus 249 -------~~~V~~~d~~~g~~~~~~~~~~~~---~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~ 306 (433)
T 4hw6_A 249 -------HAMISSYDPATGTLTEEEVMMDTK---GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRET 306 (433)
T ss_dssp -------CSEEEEECTTTCCEEEEEEECSCC---SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTT
T ss_pred -------CCEEEEEECCCCeEEEEEeccCCC---CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCC
Confidence 6789999998 877 333443221 223344443 45799999999999999987543
No 42
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=6.1e-14 Score=123.63 Aligned_cols=156 Identities=7% Similarity=0.053 Sum_probs=119.6
Q ss_pred CCCcEEEcC--CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEAS--DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~--dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|.+|+++| +|+||++|.. ++|.++|.+++.++.+......|++|+++++|++|||++..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~------------------~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~ 199 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ------------------HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQ 199 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT------------------EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECC
T ss_pred CCCEEEECCCCCCeEEEEeCC------------------CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCC
Confidence 489999996 5899999873 58999999877888888888899999999999999999985
Q ss_pred CC----EEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhc
Q 047259 79 KF----RCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLI 153 (225)
Q Consensus 79 ~~----~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~ 153 (225)
.+ .++.++.++. ......+.. ...|.++++|+ +|+||+++..
T Consensus 200 ~~~~~~~v~~~~~~g~-~~~~~~l~~--~~~p~giavdp~~g~lyv~d~~------------------------------ 246 (430)
T 3tc9_A 200 NNNDRPNNYILTRESG-FKVITELTK--GQNCNGAETHPINGELYFNSWN------------------------------ 246 (430)
T ss_dssp SCTTSEEEEEEEGGGT-SCSEEEEEE--CSSCCCEEECTTTCCEEEEETT------------------------------
T ss_pred CCcccceEEEEeCCCc-eeeeeeecc--CCCceEEEEeCCCCEEEEEECC------------------------------
Confidence 43 5677776653 221223321 23599999999 8999999987
Q ss_pred cCCCCcceEEEEECCCCcEE-EEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcc
Q 047259 154 PLGNDAGARIVKVDTHGKII-MDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 154 ~~~~~~~~~V~~~d~~G~~~-~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.++|.++++++... .....+.+ ..+..++.+ +++||+++..+++|.+++.++..
T Consensus 247 ------~~~V~~~~~~~~~~~~~~~~~~~---~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~ 303 (430)
T 3tc9_A 247 ------AGQVFRYDFTTQETTPLFTIQDS---GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKT 303 (430)
T ss_dssp ------TTEEEEEETTTTEEEEEEECSSS---SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred ------CCEEEEEECCCCcEEEEEEcCCC---CcceeEEEcCCCCEEEEEECCCCEEEEEeCCccc
Confidence 56899999997655 44444332 346666653 45699999999999999988653
No 43
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.60 E-value=6e-14 Score=115.08 Aligned_cols=149 Identities=14% Similarity=0.191 Sum_probs=112.1
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++++++++|+||+++.. .+.|++++. +++..... .....|.+|+++++|+ |||++..
T Consensus 147 ~~~~i~~d~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~ 207 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQ-----------------NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIM 207 (300)
T ss_dssp CEEEEEECTTSSEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETT
T ss_pred CceeEEECCCCCEEEEecC-----------------CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCC-EEEEccC
Confidence 3788999999999999875 568999998 46665543 3456899999999986 9999999
Q ss_pred CCEEEEEEecCCCCCceeEEe-ccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFI-EHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~-~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
.++|++|+.++ ....+. ......|.+|++|++|+||+++..
T Consensus 208 ~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~---------------------------------- 249 (300)
T 2qc5_A 208 GNKIGRITTTG----EISEYDIPTPNARPHAITAGKNSEIWFTEWG---------------------------------- 249 (300)
T ss_dssp TTEEEEECTTC----CEEEEECSSTTCCEEEEEECSTTCEEEEETT----------------------------------
T ss_pred CCEEEEEcCCC----cEEEEECCCCCCCceEEEECCCCCEEEeccC----------------------------------
Confidence 99999999743 232222 112246899999999999999866
Q ss_pred CcceEEEEECCCCcEEEEEECCCCCcccceeEEEE-eCCEEEEeeCCCCeEEEEeCC
Q 047259 158 DAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVE-FEDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 158 ~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~-~~~~Lyv~~~~~~~i~~~~~~ 213 (225)
.+.|.+++++|++. .+..+.+ ...+..++. .+|+||+++. + .|.+++++
T Consensus 250 --~~~i~~~~~~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 250 --ANQIGRITNDNTIQ-EYQLQTE--NAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp --TTEEEEECTTSCEE-EEECCST--TCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred --CCeEEEECCCCcEE-EEECCcc--CCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 56899999988775 4544433 223455554 4789999998 6 99998764
No 44
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.60 E-value=6.8e-14 Score=128.84 Aligned_cols=158 Identities=12% Similarity=0.101 Sum_probs=124.9
Q ss_pred CCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCC
Q 047259 2 TNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 2 pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
|-+|++++ +|+||+||.. .++|++++.+...++.+. .++..|+|||++..++.||+++...
T Consensus 39 ~~~l~~d~~~~~lywtD~~-----------------~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~ 101 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDIS-----------------LKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGT 101 (628)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT
T ss_pred eEEEEEECCCCEEEEEECC-----------------CCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCC
Confidence 34788887 5789999987 679999998754555544 4667899999999888899999999
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
++|.+++++|. ..+++.......|.+|++|+ +|.||+++++.
T Consensus 102 ~~I~v~~~dG~---~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~---------------------------------- 144 (628)
T 4a0p_A 102 NRIEVSKLDGQ---HRQVLVWKDLDSPRALALDPAEGFMYWTEWGG---------------------------------- 144 (628)
T ss_dssp TEEEEEETTST---TCEEEECSSCCCEEEEEEETTTTEEEEEECSS----------------------------------
T ss_pred CEEEEEecCCC---cEEEEEeCCCCCcccEEEccCCCeEEEeCCCC----------------------------------
Confidence 99999999873 23444422234699999997 78999999762
Q ss_pred cceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 159 AGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 159 ~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.++|.+++.+|.....+.. + +..+++++.+ +++||+++...++|.++++++...+
T Consensus 145 -~~~I~r~~~dG~~~~~l~~--~--~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 145 -KPKIDRAAMDGSERTTLVP--N--VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE 201 (628)
T ss_dssp -SCEEEEEETTSCSCEEEEC--S--CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred -CCEEEEEeCCCCceEEEEC--C--CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence 4689999999987666653 2 4567888765 6999999999999999999886544
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.59 E-value=1.8e-13 Score=112.16 Aligned_cols=155 Identities=17% Similarity=0.256 Sum_probs=116.6
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++++++++|+||+++.. .+.|+++|+ +++..... .....|++|+++++|+ ||+++..
T Consensus 100 ~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~ 160 (299)
T 2z2n_A 100 APYGITEGPNGDIWFTEMN-----------------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFTENQ 160 (299)
T ss_dssp CEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEEETT
T ss_pred CceeeEECCCCCEEEEecC-----------------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCC
Confidence 3678999999999999875 568999998 46665543 2456899999999986 9999998
Q ss_pred CCEEEEEEecCCCCCceeEEe-ccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFI-EHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~-~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
.+.|++++.++ ....+. ......|.++++|++|++|++...
T Consensus 161 ~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---------------------------------- 202 (299)
T 2z2n_A 161 NNAIGRITESG----DITEFKIPTPASGPVGITKGNDDALWFVEII---------------------------------- 202 (299)
T ss_dssp TTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEETT----------------------------------
T ss_pred CCEEEEEcCCC----cEEEeeCCCCCCcceeEEECCCCCEEEEccC----------------------------------
Confidence 89999999832 333331 112235889999999999999866
Q ss_pred CcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCCccc
Q 047259 158 DAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNTPEA 217 (225)
Q Consensus 158 ~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~~~~ 217 (225)
.+.|.+++++|+.. .+..+.. ...+..++.+ +|+||+++...+.|.+++.++...
T Consensus 203 --~~~i~~~~~~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~ 258 (299)
T 2z2n_A 203 --GNKIGRITTSGEIT-EFKIPTP--NARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIE 258 (299)
T ss_dssp --TTEEEEECTTCCEE-EEECSST--TCCEEEEEECSTTCEEEEETTTTEEEEEETTTEEE
T ss_pred --CceEEEECCCCcEE-EEECCCC--CCCceeEEECCCCCEEEeccCCceEEEECCCCceE
Confidence 45899999988765 3544422 3356666654 689999999999999999865433
No 46
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=1.2e-13 Score=113.17 Aligned_cols=152 Identities=14% Similarity=0.168 Sum_probs=113.4
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE--ecCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL--HEGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~--~~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++++++++|++|+++.. .+.|+++|. +++++.. ......|.+|+++++|+ ||+++..
T Consensus 142 ~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~ 202 (299)
T 2z2n_A 142 YPSFITLGSDNALWFTENQ-----------------NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEII 202 (299)
T ss_dssp CEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETT
T ss_pred CCceEEEcCCCCEEEEeCC-----------------CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccC
Confidence 3688999999999999875 568999998 5777654 23467799999999987 9999998
Q ss_pred CCEEEEEEecCCCCCceeEEe-ccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFI-EHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~-~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
.+.|.+|++++ ....+. ......|.+|++|++|++|++...
T Consensus 203 ~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---------------------------------- 244 (299)
T 2z2n_A 203 GNKIGRITTSG----EITEFKIPTPNARPHAITAGAGIDLWFTEWG---------------------------------- 244 (299)
T ss_dssp TTEEEEECTTC----CEEEEECSSTTCCEEEEEECSTTCEEEEETT----------------------------------
T ss_pred CceEEEECCCC----cEEEEECCCCCCCceeEEECCCCCEEEeccC----------------------------------
Confidence 89999999832 232332 112246899999999999999866
Q ss_pred CcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCCc
Q 047259 158 DAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 158 ~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.|.++|++|++. .+..+.+ ...+..++..+++||+++. .+.|.+++..+.
T Consensus 245 --~~~i~~~d~~g~~~-~~~~~~~--~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 245 --ANKIGRLTSNNIIE-EYPIQIK--SAEPHGICFDGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp --TTEEEEEETTTEEE-EEECSSS--SCCEEEEEECSSCEEEEET-TTEEEEEEEC--
T ss_pred --CceEEEECCCCceE-EEeCCCC--CCccceEEecCCCEEEEec-CCcEEEEEcCcc
Confidence 46899999988654 5554432 2335555447899999986 689999987654
No 47
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.58 E-value=4e-14 Score=121.60 Aligned_cols=159 Identities=15% Similarity=0.171 Sum_probs=107.5
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE------ecCccccceeEEecC---CCE
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL------HEGFYFANGVALSKD---ENF 71 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~------~~~~~~pnGi~~~~d---g~~ 71 (225)
.|.+|++++||+|||++.. |+|++++ + ++.+.+ ..+...|+||+++|| ++.
T Consensus 32 ~P~~ia~~pdG~l~V~e~~------------------g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~ 91 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERP------------------GRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPY 91 (352)
T ss_dssp CEEEEEECTTSCEEEEETT------------------TEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCE
T ss_pred CceEEEEcCCCeEEEEeCC------------------CeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCE
Confidence 4789999999999999763 6899998 3 555433 234678999999999 778
Q ss_pred EEEEeCCC-----CEEEEEEecCCCCCceeEEeccCC------CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHH
Q 047259 72 VVVCESWK-----FRCRRYWLKGPRQGRLESFIEHLP------GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWK 140 (225)
Q Consensus 72 Lyv~~~~~-----~~I~~~~~~~~~~~~~~~~~~~~~------g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~ 140 (225)
|||+++.. ++|+||+.++..+...+++....+ ..|.+|++++||+||++.........
T Consensus 92 lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~----------- 160 (352)
T 2ism_A 92 VYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYEREL----------- 160 (352)
T ss_dssp EEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGG-----------
T ss_pred EEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCcc-----------
Confidence 99999864 799999987533334444443222 25889999999999999865322100
Q ss_pred HHHhhhhhhhhhccCCCCcceEEEEECCCCcE-------------EEEEECCCCCcccceeEEEEe--CCEEEEeeCCCC
Q 047259 141 LLQAYPELINLLIPLGNDAGARIVKVDTHGKI-------------IMDFNDPNATYISFVTSAVEF--EDNLYMASIQSK 205 (225)
Q Consensus 141 ~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~-------------~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~ 205 (225)
+ + ......++|+|++++|++ .+.+.. | +..+..++.+ +++||+++...+
T Consensus 161 -----~------~-d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~--G--~rnp~g~a~d~~~g~l~v~d~g~~ 224 (352)
T 2ism_A 161 -----A------Q-DLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSL--G--HRNPQGLAWHPKTGELFSSEHGPS 224 (352)
T ss_dssp -----G------G-CTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEE--C--CSEECCCEECTTTCCEEEEEECC-
T ss_pred -----c------c-CCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEE--c--CCCcccEEEECCCCCEEEEEcCCC
Confidence 0 0 011126899999999943 222322 1 2334445554 689999999887
Q ss_pred e
Q 047259 206 F 206 (225)
Q Consensus 206 ~ 206 (225)
.
T Consensus 225 ~ 225 (352)
T 2ism_A 225 G 225 (352)
T ss_dssp -
T ss_pred C
Confidence 6
No 48
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.55 E-value=5.2e-13 Score=113.15 Aligned_cols=159 Identities=15% Similarity=0.175 Sum_probs=113.3
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE-ecCc-------cccceeEE---ecC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL-HEGF-------YFANGVAL---SKD 68 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~~-------~~pnGi~~---~~d 68 (225)
||++++.++ +|++||++.. .|.|+++++..+..+.+ .+++ ..|.||.+ +|+
T Consensus 14 yPE~~~wd~~~g~~~vs~l~-----------------~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~ 76 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLY-----------------KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS 76 (334)
T ss_dssp CCSCEEEETTTTEEEEEETT-----------------TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC
T ss_pred CCcCccCcCCCCEEEEEecc-----------------CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC
Confidence 899999977 7899999997 68999999975554443 3332 36799999 799
Q ss_pred CCEEEE-EeC------------CCCEEEEEEecCCCCCceeEEec------c-------CCCCCCceEECCCCCEEEEee
Q 047259 69 ENFVVV-CES------------WKFRCRRYWLKGPRQGRLESFIE------H-------LPGGPDNINLAPDGSFWVALI 122 (225)
Q Consensus 69 g~~Lyv-~~~------------~~~~I~~~~~~~~~~~~~~~~~~------~-------~~g~Pd~i~~d~~G~l~v~~~ 122 (225)
++ ||| ++. +.+.|++|++++...+.....++ . ..+.+++|++|++|+.||++.
T Consensus 77 gr-L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s 155 (334)
T 2p9w_A 77 KR-LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA 155 (334)
T ss_dssp CE-EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE
T ss_pred Cc-EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC
Confidence 65 776 442 46899999987211122222222 1 123589999999999999987
Q ss_pred cCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcc-eEEEEECCCCcEEEEE--ECCCCCcccceeEEEEe--CCEE
Q 047259 123 KMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAG-ARIVKVDTHGKIIMDF--NDPNATYISFVTSAVEF--EDNL 197 (225)
Q Consensus 123 ~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~-~~V~~~d~~G~~~~~~--~~p~g~~~~~~t~~~~~--~~~L 197 (225)
. . +.|++++++|+.+..+ ..|......+.++++.. +..|
T Consensus 156 ~------------------------------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~L 199 (334)
T 2p9w_A 156 L------------------------------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKL 199 (334)
T ss_dssp E------------------------------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEE
T ss_pred C------------------------------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEE
Confidence 6 5 7899999999854433 33333223457777765 5678
Q ss_pred EEeeCCCCeEEEEeCCC
Q 047259 198 YMASIQSKFVGKLPLNT 214 (225)
Q Consensus 198 yv~~~~~~~i~~~~~~~ 214 (225)
++.+. .++|.+|++..
T Consensus 200 iv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 200 IAFGG-PRALTAFDVSK 215 (334)
T ss_dssp EEESS-SSSEEEEECSS
T ss_pred EEEcC-CCeEEEEcCCC
Confidence 88887 99999999884
No 49
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=6.1e-13 Score=116.36 Aligned_cols=159 Identities=10% Similarity=0.071 Sum_probs=117.8
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKF 80 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~ 80 (225)
.|.+|+++++|+||+++.. .++|.++|.+++.++.+......|. ++++++++.||+++...+
T Consensus 132 ~P~~la~d~~g~lyv~d~~-----------------~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~ 193 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRD-----------------DPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGT 193 (409)
T ss_dssp CEEEEEECSTTEEEEEETT-----------------TTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTT
T ss_pred CceEEEEeCCCCEEEEecC-----------------CCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCC
Confidence 4789999999999999986 5799999998888888777777788 999999999999998665
Q ss_pred -EEEEEEecCCCCCceeEEe---ccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 81 -RCRRYWLKGPRQGRLESFI---EHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 81 -~I~~~~~~~~~~~~~~~~~---~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
+|++++.++... ...+. ......|.++++++ +|+||+++.
T Consensus 194 ~~I~~~d~~~~~~--~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--------------------------------- 238 (409)
T 3hrp_A 194 HTVYVYMKASGWA--PTRIGQLGSTFSGKIGAVALDETEEWLYFVDS--------------------------------- 238 (409)
T ss_dssp CEEEEEEGGGTTC--EEEEEECCTTSCSCCCBCEECTTSSEEEEECT---------------------------------
T ss_pred ceEEEEEcCCCce--eEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---------------------------------
Confidence 999999875311 22221 11235699999999 789999542
Q ss_pred CCCcceEEEEECCCCcEEEEEEC--CCCCccccee-EEEEe--CCEEEEeeCCCCeEEEEeCCCcc
Q 047259 156 GNDAGARIVKVDTHGKIIMDFND--PNATYISFVT-SAVEF--EDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~~~~~--p~g~~~~~~t-~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.+.|.++|+++.....+.. ..+.....+. .++.+ +++||+++...++|.+++.++..
T Consensus 239 ----~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~ 300 (409)
T 3hrp_A 239 ----NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC 300 (409)
T ss_dssp ----TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE
T ss_pred ----CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE
Confidence 3589999998654444421 1111111222 55543 69999999999999999988753
No 50
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.53 E-value=7.6e-13 Score=111.99 Aligned_cols=160 Identities=13% Similarity=0.073 Sum_probs=115.9
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCcc------ccceeEEecCCCEEEEE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFY------FANGVALSKDENFVVVC 75 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~------~pnGi~~~~dg~~Lyv~ 75 (225)
|++++++++|++|+++.. .+.|+++|..++++........ .|++|++ +++.|||+
T Consensus 86 p~~i~~~~~g~lyv~~~~-----------------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~ 146 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIW-----------------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVN 146 (328)
T ss_dssp EEEEEEEETTEEEEEEBS-----------------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEE
T ss_pred CcEEEEeCCCeEEEEECC-----------------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEE
Confidence 678999889999999864 5789999998888765544444 8999999 45679999
Q ss_pred eCC-CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhcc
Q 047259 76 ESW-KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIP 154 (225)
Q Consensus 76 ~~~-~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~ 154 (225)
+.+ .+.|.++++++. .....+. ....|.++++|++|++|++..+..... | .
T Consensus 147 ~~~~~~~v~viD~~t~---~~~~~i~-~g~~p~~i~~~~dG~l~v~~~~~~~~~-----------------~-----~-- 198 (328)
T 3dsm_A 147 CWSYQNRILKIDTETD---KVVDELT-IGIQPTSLVMDKYNKMWTITDGGYEGS-----------------P-----Y-- 198 (328)
T ss_dssp ECTTCCEEEEEETTTT---EEEEEEE-CSSCBCCCEECTTSEEEEEBCCBCTTC-----------------S-----S--
T ss_pred cCCCCCEEEEEECCCC---eEEEEEE-cCCCccceEEcCCCCEEEEECCCccCC-----------------c-----c--
Confidence 984 889999998753 2211121 344699999999999999987621000 0 0
Q ss_pred CCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcc
Q 047259 155 LGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 155 ~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
..+ .+.|.++|++ ++++..+..+.|. .+..++.. +++||+++. .|.+++..+..
T Consensus 199 ~~~--~~~v~~id~~t~~v~~~~~~~~g~---~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~ 255 (328)
T 3dsm_A 199 GYE--APSLYRIDAETFTVEKQFKFKLGD---WPSEVQLNGTRDTLYWINN---DIWRMPVEADR 255 (328)
T ss_dssp CBC--CCEEEEEETTTTEEEEEEECCTTC---CCEEEEECTTSCEEEEESS---SEEEEETTCSS
T ss_pred ccC--CceEEEEECCCCeEEEEEecCCCC---CceeEEEecCCCEEEEEcc---EEEEEECCCCc
Confidence 000 3689999986 7888788876553 45666654 789999975 88899886543
No 51
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.53 E-value=2e-13 Score=117.45 Aligned_cols=164 Identities=16% Similarity=0.199 Sum_probs=111.1
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe------cCccccceeEEecC---CCE
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH------EGFYFANGVALSKD---ENF 71 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~------~~~~~pnGi~~~~d---g~~ 71 (225)
.|.+|++++||+|||++.. |+|++++.+ ++ +.+. .+...|+||+++|| ++.
T Consensus 30 ~P~~ia~~pdG~l~V~e~~------------------g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~ 89 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERP------------------GRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSW 89 (354)
T ss_dssp CEEEEEEEETTEEEEEETT------------------TEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCE
T ss_pred CCeEEEEcCCCeEEEEeCC------------------CEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCE
Confidence 4789999999999999763 789999864 66 4432 34678999999998 668
Q ss_pred EEEEeCC---C----CEEEEEEecCC--CCCceeEEeccCC----CCCCceEECCCCCEEEEeecCCchhhhhhhcChhH
Q 047259 72 VVVCESW---K----FRCRRYWLKGP--RQGRLESFIEHLP----GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDK 138 (225)
Q Consensus 72 Lyv~~~~---~----~~I~~~~~~~~--~~~~~~~~~~~~~----g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~ 138 (225)
|||+++. . ++|+|++.++. .+...+++....+ ..|.+|++++||+||++......... .
T Consensus 90 lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~---~----- 161 (354)
T 3a9g_A 90 VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRL---A----- 161 (354)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGG---G-----
T ss_pred EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCcc---c-----
Confidence 9999874 3 79999998753 2333444433222 25889999999999999865321100 0
Q ss_pred HHHHHhhhhhhhhhccCCCCcceEEEEECCCCcE--------EEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCe--
Q 047259 139 WKLLQAYPELINLLIPLGNDAGARIVKVDTHGKI--------IMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKF-- 206 (225)
Q Consensus 139 r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~--------~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~-- 206 (225)
+ ......++|+|++++|++ .+.+.. | +..+..++.+ +++||+++...+.
T Consensus 162 --------------~-d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~--G--~rnp~Gla~d~~~g~l~v~d~g~~~~d 222 (354)
T 3a9g_A 162 --------------Q-DLSSLAGKILRVDEEGRPPADNPFPNSPIWSY--G--HRNPQGIDWHRASGVMVATEHGPVGHD 222 (354)
T ss_dssp --------------T-CTTCCSSEEEEECTTSCCCTTSSSTTCCEEEE--C--CSCCCEEEECTTTCCEEEEECCSSSCC
T ss_pred --------------c-CCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEE--c--cCCcceEEEeCCCCCEEEEecCCCCCc
Confidence 0 001126899999999973 233332 2 2345556654 6899999998765
Q ss_pred -EEEEe
Q 047259 207 -VGKLP 211 (225)
Q Consensus 207 -i~~~~ 211 (225)
|-++.
T Consensus 223 ei~~i~ 228 (354)
T 3a9g_A 223 EVNIIL 228 (354)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 55443
No 52
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.52 E-value=7.2e-13 Score=109.64 Aligned_cols=167 Identities=17% Similarity=0.200 Sum_probs=115.4
Q ss_pred CCCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCC
Q 047259 1 FTNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 1 ~pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
+|++++++++|+ ||+++.. .+.|++++++++ .+........|++|++++||+ ||+++...
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~-----------------~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~ 89 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVR-----------------QNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGH-LIACSHGL 89 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGG-----------------GTEEEEEETTSC-EEEEESSCSSEEEEEECTTCC-EEEEETTT
T ss_pred cccCCeEeCCCCEEEEEeCC-----------------CCEEEEEECCCC-eEEEECCCCCcceeeECCCCc-EEEEecCC
Confidence 478899999998 9999875 579999999866 666666677899999999998 99999988
Q ss_pred CEEEEEEecCCCCCceeEEecc---C-CCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 80 FRCRRYWLKGPRQGRLESFIEH---L-PGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~---~-~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
++|.+++++++ ..+.+... . ...|.++++|++|++|+++..... ...+ ......
T Consensus 90 ~~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~-~~~~------------------~~~~~~ 147 (296)
T 3e5z_A 90 RRLERQREPGG---EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGI-DKPE------------------EGYGGE 147 (296)
T ss_dssp TEEEEECSTTC---CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHH-HCGG------------------GSSCCC
T ss_pred CeEEEEcCCCC---cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccc-cccc------------------cccccc
Confidence 99999998532 33333321 1 135889999999999999753100 0000 000000
Q ss_pred CCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCC
Q 047259 156 GNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~ 213 (225)
.....+.|++++++|++...... +..+..++.. ++++++++...++|.+++++
T Consensus 148 ~~~~~~~l~~~~~~g~~~~~~~~-----~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 148 MELPGRWVFRLAPDGTLSAPIRD-----RVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp CCSSSCEEEEECTTSCEEEEECC-----CSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred ccCCCcEEEEECCCCCEEEeecC-----CCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 00014689999999876543321 2345566653 45544999999999999986
No 53
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.52 E-value=3.8e-13 Score=113.20 Aligned_cols=170 Identities=11% Similarity=0.044 Sum_probs=110.6
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec--------------------Ccccc
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE--------------------GFYFA 60 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--------------------~~~~p 60 (225)
+|++++++++|++|+++.. .++|++++.++++++.... ....|
T Consensus 20 ~p~~i~~d~~g~~l~v~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p 82 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQ-----------------DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRT 82 (322)
T ss_dssp CCCCEECCTTCSSEEEECT-----------------TSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCE
T ss_pred CceEEEEcCCCCEEEEEcC-----------------CCeEEEECCCCCceEEEecccccccccccccccchhccccCCCC
Confidence 4899999999995555554 5789999987666665431 12469
Q ss_pred ceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccC----CCCCCceEECC-CCCEEEEeecCCchhhhhhhcC
Q 047259 61 NGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHL----PGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSC 135 (225)
Q Consensus 61 nGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~----~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~ 135 (225)
.||+++++++.|||++.. +.|++++++++ ..+.+.... ...|+++++|+ +|+||+++...+... .
T Consensus 83 ~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g---~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~------~ 152 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY-YHLSVVGSEGG---HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDD------R 152 (322)
T ss_dssp EEEEEETTTTEEEEEETT-TEEEEECTTCE---ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCT------T
T ss_pred ceEEEcCCCCcEEEEECC-CCEEEEeCCCC---EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccc------c
Confidence 999999833459999986 45899987642 233443211 13589999999 999999987632100 0
Q ss_pred hhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCC
Q 047259 136 PDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 136 ~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~ 213 (225)
.....+.. ... .+.|.++|+++..+..+.. + +..+..++.. ++.|||++...++|.+++++
T Consensus 153 ~~~~~~~~-----------~~~--~g~v~~~d~~~~~~~~~~~--~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 153 GVQQIMDT-----------SDK--TGRLIKYDPSTKETTLLLK--E--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp CHHHHHHH-----------TCC--CEEEEEEETTTTEEEEEEE--E--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred ccceehcc-----------cCC--CceEEEEeCCCCEEEEecc--C--CccCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 00111110 111 5889999997433333321 1 2234455543 45799999999999999988
Q ss_pred C
Q 047259 214 T 214 (225)
Q Consensus 214 ~ 214 (225)
+
T Consensus 216 ~ 216 (322)
T 2fp8_A 216 G 216 (322)
T ss_dssp S
T ss_pred C
Confidence 5
No 54
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.51 E-value=6.2e-13 Score=114.00 Aligned_cols=166 Identities=16% Similarity=0.194 Sum_probs=113.3
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE-------ecCccccceeEEecC---CC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL-------HEGFYFANGVALSKD---EN 70 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-------~~~~~~pnGi~~~~d---g~ 70 (225)
.|.+|++.+||++|||+.. .|+|++++.++++.+.+ ..+...+.||+++|| ++
T Consensus 33 ~P~~ia~~pdG~llVter~-----------------~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g 95 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRD-----------------EATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDH 95 (347)
T ss_dssp SEEEEEECTTSCEEEEETT-----------------TCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHC
T ss_pred CceEEEEcCCCcEEEEEec-----------------CCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCC
Confidence 3678999999999999874 58999998765665543 245678999999996 45
Q ss_pred EEEEEeC--CCCEEEEEEecC-----CCCCceeEEeccCC----CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHH
Q 047259 71 FVVVCES--WKFRCRRYWLKG-----PRQGRLESFIEHLP----GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKW 139 (225)
Q Consensus 71 ~Lyv~~~--~~~~I~~~~~~~-----~~~~~~~~~~~~~~----g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r 139 (225)
+|||+.+ ..++|.|+..++ ..+...+++....+ ..+..|++++||.||++.......+. .
T Consensus 96 ~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~---~------ 166 (347)
T 3das_A 96 MVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGL---S------ 166 (347)
T ss_dssp EEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGG---T------
T ss_pred EEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCcc---c------
Confidence 7999754 567999999875 23334444443333 14677999999999999876432110 0
Q ss_pred HHHHhhhhhhhhhccCCCCcceEEEEECCCCcE--------EEEEECCCCCcccceeEEEEe-CCEEEEeeCCCC---eE
Q 047259 140 KLLQAYPELINLLIPLGNDAGARIVKVDTHGKI--------IMDFNDPNATYISFVTSAVEF-EDNLYMASIQSK---FV 207 (225)
Q Consensus 140 ~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~--------~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~---~i 207 (225)
+ ......++|+|++++|++ .+++.. | +.++..++.+ +|.||+++.+.+ .|
T Consensus 167 -------------q-d~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~--G--~RNp~Gla~dp~G~L~~~d~g~~~~del 228 (347)
T 3das_A 167 -------------Q-DRKSLGGKILRMTPDGEPAPGNPFPGSPVYSY--G--HRNVQGLAWDDKQRLFASEFGQDTWDEL 228 (347)
T ss_dssp -------------T-CTTCSTTCEEEECTTSSBCTTCSSTTCCEEEB--C--CSBCCEEEECTTCCEEEEECCSSSCEEE
T ss_pred -------------c-CCCCCCCEEEEEeCCCCccCCCCCCCCeEEee--C--CCCcceEEECCCCCEEEEecCCCCCcee
Confidence 0 011127899999999973 234443 2 3445556654 689999998764 45
Q ss_pred EEE
Q 047259 208 GKL 210 (225)
Q Consensus 208 ~~~ 210 (225)
-++
T Consensus 229 n~i 231 (347)
T 3das_A 229 NAI 231 (347)
T ss_dssp EEE
T ss_pred eEE
Confidence 554
No 55
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.50 E-value=4.6e-13 Score=113.33 Aligned_cols=135 Identities=13% Similarity=0.112 Sum_probs=96.8
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec--CccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE--GFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
.|++++++++|++|++..+...+. . .....+.|+++|+.++++..... ....|++|+++||+++||+++.
T Consensus 173 ~p~~i~~~~dG~l~v~~~~~~~~~-~------~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 173 QPTSLVMDKYNKMWTITDGGYEGS-P------YGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp CBCCCEECTTSEEEEEBCCBCTTC-S------SCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred CccceEEcCCCCEEEEECCCccCC-c------cccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 378999999999999988621000 0 00114799999998887764432 2358999999999999999986
Q ss_pred CCEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
.|+++++++..... ..++......|++|++|+ +|+|||++...- ..
T Consensus 245 --~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y------------------------------~~ 291 (328)
T 3dsm_A 245 --DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVADAIDY------------------------------QQ 291 (328)
T ss_dssp --SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEECTTS------------------------------SS
T ss_pred --EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEccccc------------------------------cc
Confidence 89999987543221 122221135799999998 789999984310 01
Q ss_pred CcceEEEEECCCCcEEEEEEC
Q 047259 158 DAGARIVKVDTHGKIIMDFND 178 (225)
Q Consensus 158 ~~~~~V~~~d~~G~~~~~~~~ 178 (225)
.+.|.++|++|+++..+..
T Consensus 292 --~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 292 --QGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp --EEEEEEECTTCCEEEEEEE
T ss_pred --CCEEEEECCCCCEEEEEEe
Confidence 7899999999999988874
No 56
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.49 E-value=5.5e-14 Score=130.95 Aligned_cols=159 Identities=13% Similarity=0.106 Sum_probs=116.0
Q ss_pred CCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC----CeEEEE-ecCccccceeEEecCCCEEEEE
Q 047259 2 TNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL----EETTVL-HEGFYFANGVALSKDENFVVVC 75 (225)
Q Consensus 2 pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~----~~~~~~-~~~~~~pnGi~~~~dg~~Lyv~ 75 (225)
|.+|++++ +++||++|.. .++|++++.++ ...+.+ ..++..|.||++++.++.|||+
T Consensus 408 p~gla~d~~~~~Ly~sD~~-----------------~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~t 470 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLS-----------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWT 470 (699)
T ss_dssp CCCCEEETTTTEEEECCTT-----------------TTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEEC
T ss_pred eEEEccccccCeEEEEecC-----------------CCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEE
Confidence 67888887 5689999886 46788888763 122223 3457789999999777779999
Q ss_pred eCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhcc
Q 047259 76 ESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIP 154 (225)
Q Consensus 76 ~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~ 154 (225)
+...++|.++++++. ...+++......|.+|++|+ .|+||+++.+.
T Consensus 471 D~~~~~I~v~d~dg~---~~~~l~~~~~~~P~giavDp~~g~ly~td~~~------------------------------ 517 (699)
T 1n7d_A 471 DSVLGTVSVADTKGV---KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT------------------------------ 517 (699)
T ss_dssp CTTTSCEEEEBSSSC---CEEEECCCSSCCCCCEECCSSSSCCEECCCSS------------------------------
T ss_pred eccCCeEEEEecCCC---ceEEEEeCCCCCcceEEEccCCCcEEEcccCC------------------------------
Confidence 999999999998763 33444432234699999998 57899998761
Q ss_pred CCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 155 LGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 155 ~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.+.|.+++.+|+...++... . +..+.+++.+ +++||+++...++|.++++++...+
T Consensus 518 -----~~~I~~~~~dG~~~~~l~~~--~-l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~ 575 (699)
T 1n7d_A 518 -----PAKIKKGGLNGVDIYSLVTE--N-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 575 (699)
T ss_dssp -----SCCEEBCCSSSCCCCEESCS--S-CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE
T ss_pred -----CCeEEEEeCCCCCeeEEEeC--C-CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE
Confidence 35789999998766555431 1 3456666654 6999999999999999999875443
No 57
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=6.3e-13 Score=118.74 Aligned_cols=168 Identities=11% Similarity=0.071 Sum_probs=115.0
Q ss_pred CCcEEE-------cCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC-CeEE-----EEecCccccceeEEec
Q 047259 2 TNDVIE-------ASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL-EETT-----VLHEGFYFANGVALSK 67 (225)
Q Consensus 2 pndv~~-------~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-~~~~-----~~~~~~~~pnGi~~~~ 67 (225)
|++|++ +++|+ ||+++.... .. .....|+.++... |.+. .....+..|+|++++|
T Consensus 188 p~~ia~~~~~~~~d~~G~~lyvad~~~~--~~---------~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp 256 (496)
T 3kya_A 188 IRSIAFNKKIEGYADEAEYMIVAIDYDG--KG---------DESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHP 256 (496)
T ss_dssp EEEEEECCCBTTTBCTTCEEEEEECCCT--TG---------GGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECT
T ss_pred CcEEEEeecccccCCCCCEEEEEeCCCC--Cc---------ccCceEEEEecCCCCceeecccceeeccCCCceEEEEcC
Confidence 788999 99997 999999721 00 0123578886543 3332 2223567999999999
Q ss_pred CCCEEEEEeCCCCEEEEEEec-------CCCC------C---ceeEEecc-CCCCCCceEECCCCC-EEEEeecCCchhh
Q 047259 68 DENFVVVCESWKFRCRRYWLK-------GPRQ------G---RLESFIEH-LPGGPDNINLAPDGS-FWVALIKMNQTGV 129 (225)
Q Consensus 68 dg~~Lyv~~~~~~~I~~~~~~-------~~~~------~---~~~~~~~~-~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~ 129 (225)
+++.||+++...++|++|+++ +... . ..+.+... ....|.+|+++++|+ ||+++..
T Consensus 257 ~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~------ 330 (496)
T 3kya_A 257 INGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN------ 330 (496)
T ss_dssp TTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT------
T ss_pred CCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC------
Confidence 777899999999999999997 4322 0 01122221 224688999999998 8999987
Q ss_pred hhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcE--E---EEEECC-------CC----Cccccee-EEEE
Q 047259 130 RAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKI--I---MDFNDP-------NA----TYISFVT-SAVE 192 (225)
Q Consensus 130 ~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~--~---~~~~~p-------~g----~~~~~~t-~~~~ 192 (225)
..+|.+++.+|.. + ..+... +| ..+..|. .++.
T Consensus 331 ------------------------------~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~v 380 (496)
T 3kya_A 331 ------------------------------NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFV 380 (496)
T ss_dssp ------------------------------TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEE
T ss_pred ------------------------------CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEE
Confidence 5688888776532 1 233221 11 1255677 5555
Q ss_pred --------eCCEEEEeeCCCCeEEEEeCCCcc
Q 047259 193 --------FEDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 193 --------~~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.++.|||++..+++|.++..++.-
T Consensus 381 d~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v 412 (496)
T 3kya_A 381 KNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIV 412 (496)
T ss_dssp ECTTCCSSCCEEEEEEEGGGTEEEEECTTCBE
T ss_pred ccccccccCCCeEEEEECCCCEEEEEeCCCCE
Confidence 358999999999999999976643
No 58
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.47 E-value=4.5e-12 Score=104.93 Aligned_cols=165 Identities=15% Similarity=0.155 Sum_probs=111.0
Q ss_pred CCCcEEEcCCCcEEEE-------cCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec-----CccccceeEEecC
Q 047259 1 FTNDVIEASDGSLYFT-------VSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE-----GFYFANGVALSKD 68 (225)
Q Consensus 1 ~pndv~~~~dG~iy~t-------d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----~~~~pnGi~~~~d 68 (225)
.|++++++++|++|++ +.. .+.|+++|..+++++.+.. ....|.+|++++|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~-----------------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 81 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKP-----------------AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD 81 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEE-----------------CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS
T ss_pred CccCceECCCCCEEEEEeccccCCCC-----------------CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC
Confidence 4789999999999999 433 5789999977788766543 3367999999999
Q ss_pred CCEEEEEeCCCCEEEEEEecCCCCCceeEE-ecc---CC-CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHH
Q 047259 69 ENFVVVCESWKFRCRRYWLKGPRQGRLESF-IEH---LP-GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQ 143 (225)
Q Consensus 69 g~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~-~~~---~~-g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~ 143 (225)
++.|||++... .|++|+.++ ....+ ... .+ ..|.++++|++|++|++..........+..
T Consensus 82 ~g~l~v~~~~~-~l~~~d~~g----~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~---------- 146 (314)
T 1pjx_A 82 ANQLFVADMRL-GLLVVQTDG----TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR---------- 146 (314)
T ss_dssp SSEEEEEETTT-EEEEEETTS----CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB----------
T ss_pred CCcEEEEECCC-CEEEEeCCC----CEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc----------
Confidence 33599998754 899998763 33333 221 11 258999999999999998752100000000
Q ss_pred hhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-----CC-EEEEeeCCCCeEEEEeCC
Q 047259 144 AYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-----ED-NLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 144 ~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-----~~-~Lyv~~~~~~~i~~~~~~ 213 (225)
. ... ..+.|++++++|+....... ...+..++.. ++ .||+++...++|.+++++
T Consensus 147 ---~------~~~--~~~~l~~~~~~g~~~~~~~~-----~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 147 ---S------MQE--KFGSIYCFTTDGQMIQVDTA-----FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp ---T------TSS--SCEEEEEECTTSCEEEEEEE-----ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred ---c------ccC--CCCeEEEECCCCCEEEeccC-----CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 0 001 15789999999877544332 1223444433 34 799999999999999875
No 59
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.47 E-value=2.7e-12 Score=107.11 Aligned_cols=166 Identities=15% Similarity=0.222 Sum_probs=114.6
Q ss_pred CCCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCC
Q 047259 1 FTNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 1 ~pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
++++++.+++|+ ||+++.. .++|++++.+ ++++........|+|+++++||+ ||+++...
T Consensus 46 ~~egp~~~~~g~~l~~~d~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~ 106 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLV-----------------GRRVLGWRED-GTVDVLLDATAFTNGNAVDAQQR-LVHCEHGR 106 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETT-----------------TTEEEEEETT-SCEEEEEESCSCEEEEEECTTSC-EEEEETTT
T ss_pred CccCCeEeCCCCEEEEEECC-----------------CCEEEEEeCC-CCEEEEeCCCCccceeeECCCCC-EEEEECCC
Confidence 357889999997 9999876 6789999984 77777666677899999999998 99999988
Q ss_pred CEEEEEEecCCCCCceeEEeccCC----CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLP----GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~----g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
++|.+++.++ ..+.+..... ..|+.+++|++|++|+++....... .+ ... . ..
T Consensus 107 ~~v~~~~~~g----~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~-~~-~~~--------------~---~~ 163 (305)
T 3dr2_A 107 RAITRSDADG----QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK-PS-QGC--------------P---AD 163 (305)
T ss_dssp TEEEEECTTS----CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC-GG-GSC--------------C---CC
T ss_pred CEEEEECCCC----CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc-cc-ccc--------------c---cc
Confidence 9999999764 3444443211 2588999999999999875311000 00 000 0 00
Q ss_pred CCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCC-----CeEEEEeCCC
Q 047259 156 GNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQS-----KFVGKLPLNT 214 (225)
Q Consensus 156 ~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~-----~~i~~~~~~~ 214 (225)
.....+.|.++|++ |++.... . +..+..++.. +..||+++... +.|.++++++
T Consensus 164 ~~~~~~~v~~~d~~~g~~~~~~-~-----~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 164 PELAHHSVYRLPPDGSPLQRMA-D-----LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp CSSSCEEEEEECSSSCCCEEEE-E-----ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred cccCCCeEEEEcCCCCcEEEEe-c-----CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 00115789999995 6664433 1 2235555543 46799999874 7999998764
No 60
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.46 E-value=1.3e-11 Score=102.10 Aligned_cols=156 Identities=15% Similarity=0.195 Sum_probs=113.3
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cCccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EGFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
||+++++++||+||++.... ..+.|..+|..++++.... ....++.|++++ ++.||++...
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~---------------~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLY---------------GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp CEEEEEECSTTEEEEEECST---------------TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred CcccEEEeCCCeEEEECCCC---------------CCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence 67899999999999997631 1578999999988876654 344567788877 4579999999
Q ss_pred CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCC-CEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG-SFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGN 157 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G-~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~ 157 (225)
.+.|+.||.++. .....+. .+ .|.|+.+.+|| ++|+++ +
T Consensus 85 ~~~v~viD~~t~--~v~~~i~--~g-~~~g~glt~Dg~~l~vs~-g---------------------------------- 124 (266)
T 2iwa_A 85 KNIGFIYDRRTL--SNIKNFT--HQ-MKDGWGLATDGKILYGSD-G---------------------------------- 124 (266)
T ss_dssp CSEEEEEETTTT--EEEEEEE--CC-SSSCCEEEECSSSEEEEC-S----------------------------------
T ss_pred CCEEEEEECCCC--cEEEEEE--CC-CCCeEEEEECCCEEEEEC-C----------------------------------
Confidence 999999998642 1122221 22 34555555554 699987 5
Q ss_pred CcceEEEEECCC-CcEEEEEECC-CCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCCc
Q 047259 158 DAGARIVKVDTH-GKIIMDFNDP-NATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 158 ~~~~~V~~~d~~-G~~~~~~~~p-~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.|..+|++ .+++..+... .++.+..+..+...+++||+..+.++.|.+++..+.
T Consensus 125 --s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 125 --TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDG 182 (266)
T ss_dssp --SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTC
T ss_pred --CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCC
Confidence 3589999997 4777777642 233344566666668999999999999999998764
No 61
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.45 E-value=1.3e-11 Score=102.76 Aligned_cols=159 Identities=9% Similarity=0.041 Sum_probs=113.2
Q ss_pred CCCcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCC
Q 047259 1 FTNDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 1 ~pndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
++++++.++ +++||++|.. .++|+++|+++++.+.. .....|.+|++++||+ ||++. .
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~-----------------~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~dG~-l~v~~--~ 72 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIP-----------------AKKVCRWDSFTKQVQRV-TMDAPVSSVALRQSGG-YVATI--G 72 (297)
T ss_dssp BEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTTCCEEEE-ECSSCEEEEEEBTTSS-EEEEE--T
T ss_pred cccCCeEECCCCEEEEEECC-----------------CCEEEEEECCCCcEEEE-eCCCceEEEEECCCCC-EEEEE--C
Confidence 467888888 5689999986 67999999987766543 3346799999999998 88887 4
Q ss_pred CEEEEEEecCCCCCceeEEeccC---C-CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHL---P-GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~---~-g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
+.|++|+++++ ..+.+.... + ..|+++++|++|++|++........ . .
T Consensus 73 ~~l~~~d~~~g---~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~------------------~-------~ 124 (297)
T 3g4e_A 73 TKFCALNWKEQ---SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAP------------------A-------V 124 (297)
T ss_dssp TEEEEEETTTT---EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBT------------------T-------B
T ss_pred CeEEEEECCCC---cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccc------------------c-------c
Confidence 69999998642 344444321 1 2478899999999999986521100 0 0
Q ss_pred CCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCC
Q 047259 156 GNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~ 213 (225)
.....+.|++++++|++...... +..+..++. +++.||+++...++|.+++++
T Consensus 125 ~~~~~~~l~~~d~~g~~~~~~~~-----~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 125 LERHQGALYSLFPDHHVKKYFDQ-----VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp CCTTCEEEEEECTTSCEEEEEEE-----ESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred ccCCCcEEEEEECCCCEEEEeec-----cccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 00116899999999987654432 223555555 356899999999999999875
No 62
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.45 E-value=1.9e-12 Score=114.93 Aligned_cols=174 Identities=13% Similarity=0.221 Sum_probs=111.7
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe---c------CccccceeEEecC---
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH---E------GFYFANGVALSKD--- 68 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~---~------~~~~pnGi~~~~d--- 68 (225)
.|.+|++++||+|||++.. .++|++++..+++.+.+. + +...+.||+++||
T Consensus 28 ~P~~~a~~pdG~l~V~e~~-----------------gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~ 90 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERA-----------------TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKN 90 (454)
T ss_dssp SEEEEEECTTSCEEEEETT-----------------TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTT
T ss_pred CceEEEEcCCCcEEEEEcC-----------------CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCc
Confidence 3678999999999999875 358999987556665442 1 2345569999997
Q ss_pred CCEEEEEeCC------------CCEEEEEEecCC--CCCceeEEeccCC----CCCCceEECCCCCEEEEeecCCchhhh
Q 047259 69 ENFVVVCESW------------KFRCRRYWLKGP--RQGRLESFIEHLP----GGPDNINLAPDGSFWVALIKMNQTGVR 130 (225)
Q Consensus 69 g~~Lyv~~~~------------~~~I~~~~~~~~--~~~~~~~~~~~~~----g~Pd~i~~d~~G~l~v~~~~~~~~~~~ 130 (225)
++.|||+.+. ..+|+|++.+.. .+...+++....+ ..+.+|++++||+||++.......-..
T Consensus 91 ~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~ 170 (454)
T 1cru_A 91 NPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLA 170 (454)
T ss_dssp SCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGG
T ss_pred CCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCcc
Confidence 6789999974 469999998642 2334444443222 247899999999999998763211000
Q ss_pred hh------hcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCc-----------EEEEEECCCCCcccceeEEEEe
Q 047259 131 AI------QSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGK-----------IIMDFNDPNATYISFVTSAVEF 193 (225)
Q Consensus 131 ~~------~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~-----------~~~~~~~p~g~~~~~~t~~~~~ 193 (225)
.+ .+.|....... + ......++|+|++++|+ ..++++. | +..+..++.+
T Consensus 171 ~~~~~~~~~~~p~~~~~~a---------q-~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~--G--~RNp~gla~d 236 (454)
T 1cru_A 171 YLFLPNQAQHTPTQQELNG---------K-DYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL--G--HRNPQGLAFT 236 (454)
T ss_dssp GTTSCCCTTCCCCHHHHHT---------T-CCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB--C--CSEEEEEEEC
T ss_pred ccccccccccccccccccc---------c-CCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE--C--CCCcceEEEC
Confidence 00 00000000000 0 01112789999999998 3455654 3 3567777765
Q ss_pred -CCEEEEeeCCCC
Q 047259 194 -EDNLYMASIQSK 205 (225)
Q Consensus 194 -~~~Lyv~~~~~~ 205 (225)
+|+||+++.+.+
T Consensus 237 p~G~L~~~d~g~~ 249 (454)
T 1cru_A 237 PNGKLLQSEQGPN 249 (454)
T ss_dssp TTSCEEEEEECSS
T ss_pred CCCCEEEEecCCC
Confidence 689999998654
No 63
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.44 E-value=8.5e-12 Score=104.47 Aligned_cols=158 Identities=15% Similarity=0.154 Sum_probs=112.7
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
+|++++++++|+||+++.. .+.|+++|.++++++.+. .....|.+|++++||+ ||++....
T Consensus 46 ~~~~~~~~~~g~l~~~~~~-----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~ 107 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVF-----------------EGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGD 107 (333)
T ss_dssp CEEEEEECTTSCEEEEETT-----------------TCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-EEEEECTT
T ss_pred cccCcEECCCCCEEEEECC-----------------CCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc-EEEEeCCC
Confidence 3678999999999999775 578999999878776654 4456799999999997 88988776
Q ss_pred ----CEEEEEEecCCCCCceeEEec-c-CCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhc
Q 047259 80 ----FRCRRYWLKGPRQGRLESFIE-H-LPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLI 153 (225)
Q Consensus 80 ----~~I~~~~~~~~~~~~~~~~~~-~-~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~ 153 (225)
+.|+++++++. ..+.+.. . ....|.++++|++|++|++......
T Consensus 108 ~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~--------------------------- 157 (333)
T 2dg1_A 108 FKSTGGIFAATENGD---NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYS--------------------------- 157 (333)
T ss_dssp SSSCCEEEEECTTSC---SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBT---------------------------
T ss_pred CCCCceEEEEeCCCC---EEEEEEccCccCCcccceEECCCCCEEEEeccccc---------------------------
Confidence 79999998753 2221221 1 1235789999999999998864110
Q ss_pred cCCCCcceEEEEECCCC-cEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCC
Q 047259 154 PLGNDAGARIVKVDTHG-KIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 154 ~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.. ..+.|+++++++ ++...... ...+..++.. ++.||+++...+.|.++++++
T Consensus 158 -~~--~~~~l~~~~~~~~~~~~~~~~-----~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 158 -TN--PLGGVYYVSPDFRTVTPIIQN-----ISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp -TB--CCEEEEEECTTSCCEEEEEEE-----ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred -cC--CCceEEEEeCCCCEEEEeecC-----CCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 00 157899999986 44332221 2234455543 357999998889999999854
No 64
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.40 E-value=4.2e-12 Score=109.05 Aligned_cols=164 Identities=13% Similarity=0.114 Sum_probs=110.4
Q ss_pred CCCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEE-E-------ecCccccceeEEecC---
Q 047259 1 FTNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTV-L-------HEGFYFANGVALSKD--- 68 (225)
Q Consensus 1 ~pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~-------~~~~~~pnGi~~~~d--- 68 (225)
.|.+|++++||+ ||+++. .|+|++++.+ ++... + ..+...++||+++||
T Consensus 19 ~P~~i~~~pdG~~l~V~e~------------------~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~ 79 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLR------------------GGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQ 79 (353)
T ss_dssp SEEEEEECSTTCCEEEEET------------------TTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHH
T ss_pred CcEEEEEcCCCCEEEEEeC------------------CceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCC
Confidence 377899999999 999976 3789999875 54432 1 234557899999997
Q ss_pred CCEEEEEeCC-------CCEEEEEEecCC--CCCceeEEeccCC------CCCCceEECCCCCEEEEeecCCchhhhhhh
Q 047259 69 ENFVVVCESW-------KFRCRRYWLKGP--RQGRLESFIEHLP------GGPDNINLAPDGSFWVALIKMNQTGVRAIQ 133 (225)
Q Consensus 69 g~~Lyv~~~~-------~~~I~~~~~~~~--~~~~~~~~~~~~~------g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~ 133 (225)
++.|||+++. .++|+|++.++. .+...+++....+ ..+.+|++++||.||++.....+..
T Consensus 80 ~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~----- 154 (353)
T 2g8s_A 80 SRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRP----- 154 (353)
T ss_dssp HCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGG-----
T ss_pred CCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCC-----
Confidence 6789999875 568999998642 2334444443333 1478999999999999986632210
Q ss_pred cChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcE-------------EEEEECCCCCcccceeEEEEe--CCEEE
Q 047259 134 SCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKI-------------IMDFNDPNATYISFVTSAVEF--EDNLY 198 (225)
Q Consensus 134 ~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~-------------~~~~~~p~g~~~~~~t~~~~~--~~~Ly 198 (225)
.. + ......++|+|++++|++ .+.+.. | +..+..++.+ +++||
T Consensus 155 -------------~~----q-~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~--G--~rnp~gl~~d~~~g~l~ 212 (353)
T 2g8s_A 155 -------------TA----Q-DLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSY--G--IRNPQGMAMNPWSNALW 212 (353)
T ss_dssp -------------GG----G-CTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEE--C--CSEEEEEEEETTTTEEE
T ss_pred -------------cc----C-CCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEE--c--CcCccceEEECCCCCEE
Confidence 00 0 001116899999999973 233432 2 3456667665 69999
Q ss_pred EeeCCCC---eEEEE
Q 047259 199 MASIQSK---FVGKL 210 (225)
Q Consensus 199 v~~~~~~---~i~~~ 210 (225)
+++...+ .|.++
T Consensus 213 ~~d~g~~~~dei~~i 227 (353)
T 2g8s_A 213 LNEHGPRGGDEINIP 227 (353)
T ss_dssp EEEECSBSCEEEECC
T ss_pred EEecCCCCCcEEeEe
Confidence 9998853 55544
No 65
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=7.6e-12 Score=106.35 Aligned_cols=160 Identities=13% Similarity=0.211 Sum_probs=104.8
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec-------CccccceeEEecCCCEEE
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE-------GFYFANGVALSKDENFVV 73 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-------~~~~pnGi~~~~dg~~Ly 73 (225)
.|++|+++++|+||++|.+. ...+.++|+++|.+++++..... ...+|++|+++++++.+|
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~------------~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~y 135 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGN------------QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVY 135 (343)
T ss_dssp CEEEEEECSSSEEEEEECHH------------HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEE
T ss_pred EeeEEEEcCCCcEEEEcCCC------------CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEE
Confidence 37899999999999999751 01225689999988787443221 124689999998877899
Q ss_pred EEeC---CCCEEEEEEecCCCCCceeEEec---------------c--------------CCCCCCceEECCCCC-EEEE
Q 047259 74 VCES---WKFRCRRYWLKGPRQGRLESFIE---------------H--------------LPGGPDNINLAPDGS-FWVA 120 (225)
Q Consensus 74 v~~~---~~~~I~~~~~~~~~~~~~~~~~~---------------~--------------~~g~Pd~i~~d~~G~-l~v~ 120 (225)
|+++ ..+.|++++++++. ...+.+ . ....|+||+++++|+ ||++
T Consensus 136 vtd~~~~~~~~i~v~d~~~g~---~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~ 212 (343)
T 2qe8_A 136 ISDPAPDDKAALIRVDLQTGL---AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLS 212 (343)
T ss_dssp EEECCSGGGCEEEEEETTTCC---EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEE
T ss_pred EEcCccCCCCeEEEEECCCCC---EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEE
Confidence 9999 88999999986421 111110 0 012378999999995 8988
Q ss_pred eecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC----CCcE--------EEEEECCCCCccccee
Q 047259 121 LIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT----HGKI--------IMDFNDPNATYISFVT 188 (225)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~----~G~~--------~~~~~~p~g~~~~~~t 188 (225)
+.. ...+++++. ++.+ +..+.. .+ .+.
T Consensus 213 ~~~------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~-~g----~pd 251 (343)
T 2qe8_A 213 PMH------------------------------------STSMYRIKSADLSNLQLTDAELGSKIERYSE-KP----ICD 251 (343)
T ss_dssp ESS------------------------------------CSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE-CC----SCS
T ss_pred eCC------------------------------------CCeEEEEEHHHhcCCCCChhhhhcceEeccc-CC----CCc
Confidence 765 235566553 1110 011111 01 122
Q ss_pred EEEE-eCCEEEEeeCCCCeEEEEeC-CCcc
Q 047259 189 SAVE-FEDNLYMASIQSKFVGKLPL-NTPE 216 (225)
Q Consensus 189 ~~~~-~~~~Lyv~~~~~~~i~~~~~-~~~~ 216 (225)
+++. .+|.||++++..++|.+++. ++..
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~G~~ 281 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSADRAY 281 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTTTEE
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCCCCE
Confidence 3343 47899999999999999998 5543
No 66
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.37 E-value=3e-11 Score=101.67 Aligned_cols=158 Identities=12% Similarity=0.140 Sum_probs=104.5
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCC-CCeEEEEe----cCccccceeEEecCCCEEEEEe
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPE-LEETTVLH----EGFYFANGVALSKDENFVVVCE 76 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~~~~----~~~~~pnGi~~~~dg~~Lyv~~ 76 (225)
++.+++++||++|+++.. .+.|+.|+.+ ++++.... .....|++++|+|||++||++.
T Consensus 143 ~~~~~~spdg~l~v~~~~-----------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~ 205 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVIDLG-----------------SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAG 205 (347)
T ss_dssp EEEEEECTTSCEEEEETT-----------------TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred ceEEEECCCCcEEEEeCC-----------------CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEe
Confidence 456999999999998876 4566666654 46655432 2344789999999999999999
Q ss_pred CCCCEEEEEEecCCCCCceeEEe--ccCC------CCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhh
Q 047259 77 SWKFRCRRYWLKGPRQGRLESFI--EHLP------GGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPE 147 (225)
Q Consensus 77 ~~~~~I~~~~~~~~~~~~~~~~~--~~~~------g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~ 147 (225)
...++|..|+++.. .+..+... ...+ ..|.+++++++|+ ||++.....
T Consensus 206 ~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~---------------------- 262 (347)
T 3hfq_A 206 ELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN---------------------- 262 (347)
T ss_dssp TTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT----------------------
T ss_pred CCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC----------------------
Confidence 99999999988631 12222111 1122 2367799999997 778876511
Q ss_pred hhhhhccCCCCcceEEEEECCCCcEE--EEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCCc
Q 047259 148 LINLLIPLGNDAGARIVKVDTHGKII--MDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 148 ~~~~~~~~~~~~~~~V~~~d~~G~~~--~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.-.|+.++++|+.. ..+... +. .+..++. ++..||+++..++.|.++.++.+
T Consensus 263 ------------~v~v~~~~~~g~~~~~~~~~~~-~~---~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 263 ------------TLAVFAVTADGHLTLIQQISTE-GD---FPRDFDLDPTEAFVVVVNQNTDNATLYARDLT 318 (347)
T ss_dssp ------------EEEEEEECGGGCEEEEEEEECS-SS---CCCEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ------------EEEEEEECCCCcEEEeEEEecC-CC---CcCeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence 34566666667543 333331 22 2444544 35689999999899999976644
No 67
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.36 E-value=1.5e-11 Score=105.52 Aligned_cols=170 Identities=14% Similarity=0.106 Sum_probs=107.6
Q ss_pred CCcEEEcCC----CcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCe---EEEEec-------CccccceeEEec
Q 047259 2 TNDVIEASD----GSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEE---TTVLHE-------GFYFANGVALSK 67 (225)
Q Consensus 2 pndv~~~~d----G~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~---~~~~~~-------~~~~pnGi~~~~ 67 (225)
|++|++++| |.||+++.... ....++|++++.+.++ .+.+.+ ....|++|+++|
T Consensus 77 p~gia~~pdf~~~g~lYv~~~~~~------------~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p 144 (352)
T 2ism_A 77 LLGLALHPRFPQEPYVYAYRTVAE------------GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP 144 (352)
T ss_dssp EEEEEECTTTTTSCEEEEEEEECT------------TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT
T ss_pred ceeEEECCCCCCCCEEEEEEecCC------------CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC
Confidence 789999998 78999987511 0113688888876442 223322 234689999999
Q ss_pred CCCEEEEEeC-------------CCCEEEEEEecCCCC----------CceeEEeccCCCCCCceEECC-CCCEEEEeec
Q 047259 68 DENFVVVCES-------------WKFRCRRYWLKGPRQ----------GRLESFIEHLPGGPDNINLAP-DGSFWVALIK 123 (225)
Q Consensus 68 dg~~Lyv~~~-------------~~~~I~~~~~~~~~~----------~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~ 123 (225)
||. |||+.. ..++|+|+++++... ...+++...+ ..|.+|++|+ +|+||+++.+
T Consensus 145 dG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 145 DGM-LYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp TSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEEC
T ss_pred CCC-EEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcC
Confidence 995 999973 237999999876210 2334554322 3599999999 8999999988
Q ss_pred CCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCc---------------EEEEEECCCCCccccee
Q 047259 124 MNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGK---------------IIMDFNDPNATYISFVT 188 (225)
Q Consensus 124 ~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~---------------~~~~~~~p~g~~~~~~t 188 (225)
.... +. . +...|.++.+.+. ....+..+. ...++
T Consensus 223 ~~~~-----------~~---------------~--~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~---~~ap~ 271 (352)
T 2ism_A 223 PSGE-----------QG---------------Y--GHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQ---GFPPG 271 (352)
T ss_dssp C----------------------------------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT---CCCEE
T ss_pred CCCC-----------CC---------------C--CCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCC---CCCCc
Confidence 4310 00 0 0123444433220 001111111 12467
Q ss_pred EEEEeCCEEEEeeCCCCeEEEEeCCCcc
Q 047259 189 SAVEFEDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 189 ~~~~~~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
+++..+|.||++++.+.+|.++++++..
T Consensus 272 G~~~~~G~l~v~~~~~~~v~~v~~~~~~ 299 (352)
T 2ism_A 272 NLAFFRGDLYVAGLRGQALLRLVLEGER 299 (352)
T ss_dssp EEEEETTEEEEEETTTTEEEEEEEEEET
T ss_pred ceEEECCEEEEEECCCCEEEEEEECCCC
Confidence 7777899999999999999999987654
No 68
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.36 E-value=2.2e-10 Score=93.26 Aligned_cols=155 Identities=14% Similarity=0.102 Sum_probs=114.2
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec--CccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE--GFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
|.+++.++. ++||++... + +.+.|.++|.++|++..... ...++.||++. ++.||+....
T Consensus 22 ftqGL~~~~-~~LyestG~--~-------------g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~ 83 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGE--T-------------GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWR 83 (243)
T ss_dssp CEEEEEEET-TEEEEEECC--T-------------TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESS
T ss_pred ccccEEEEC-CEEEEECCC--C-------------CCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEee
Confidence 567888886 799999765 1 25689999999998876543 34455677766 5679999999
Q ss_pred CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
.++++.||.++. .....|. .++.+-|++.|. ++||+++..
T Consensus 84 ~~~v~v~D~~tl--~~~~ti~--~~~~Gwglt~dg-~~L~vSdgs----------------------------------- 123 (243)
T 3mbr_X 84 NHEGFVYDLATL--TPRARFR--YPGEGWALTSDD-SHLYMSDGT----------------------------------- 123 (243)
T ss_dssp SSEEEEEETTTT--EEEEEEE--CSSCCCEEEECS-SCEEEECSS-----------------------------------
T ss_pred CCEEEEEECCcC--cEEEEEe--CCCCceEEeeCC-CEEEEECCC-----------------------------------
Confidence 999999998652 2222332 344566777663 589999832
Q ss_pred cceEEEEECCC-CcEEEEEECC-CCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCCc
Q 047259 159 AGARIVKVDTH-GKIIMDFNDP-NATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 159 ~~~~V~~~d~~-G~~~~~~~~p-~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
..|..+||+ .+++..+... ++..+...+.+...+|+||+..+.++.|.+++..+.
T Consensus 124 --~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG 180 (243)
T 3mbr_X 124 --AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASG 180 (243)
T ss_dssp --SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTC
T ss_pred --CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCC
Confidence 478999997 6888777652 344455667777779999999999999999998764
No 69
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.36 E-value=8.8e-11 Score=96.51 Aligned_cols=155 Identities=12% Similarity=0.069 Sum_probs=112.4
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec--CccccceeEEecCCCEEEEEeCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE--GFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
|.+++.++ +|.||++... + +.+.|.++|.+++++..... ...+..||+++ ++.||++...
T Consensus 44 ftqGL~~~-~~~LyestG~--~-------------g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~ 105 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGL--N-------------GRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWK 105 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEE--T-------------TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESS
T ss_pred ccceEEEE-CCEEEEECCC--C-------------CCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEee
Confidence 45788888 7899999664 1 14589999999998766543 33455667775 5579999999
Q ss_pred CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
.+.++.||+++. .....|. .++.+-|++.|. ++||+++ +
T Consensus 106 ~~~v~v~D~~t~--~~~~ti~--~~~eG~glt~dg-~~L~~Sd-G----------------------------------- 144 (262)
T 3nol_A 106 NGLGFVWNIRNL--RQVRSFN--YDGEGWGLTHND-QYLIMSD-G----------------------------------- 144 (262)
T ss_dssp SSEEEEEETTTC--CEEEEEE--CSSCCCCEEECS-SCEEECC-S-----------------------------------
T ss_pred CCEEEEEECccC--cEEEEEE--CCCCceEEecCC-CEEEEEC-C-----------------------------------
Confidence 999999998752 2222232 334456777664 5799987 3
Q ss_pred cceEEEEECCC-CcEEEEEECC-CCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCCc
Q 047259 159 AGARIVKVDTH-GKIIMDFNDP-NATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 159 ~~~~V~~~d~~-G~~~~~~~~p-~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
...|..+||+ .+++..+... +|+.+..++.+...+|+||+..+.++.|.+++..+.
T Consensus 145 -s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 145 -TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp -SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTC
T ss_pred -CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCC
Confidence 2479999997 7888888763 344455666666678999999999999999988654
No 70
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.34 E-value=5.3e-11 Score=102.27 Aligned_cols=172 Identities=14% Similarity=0.166 Sum_probs=108.1
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCC--------eEEEEecCccccceeEEecCCCEE
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELE--------ETTVLHEGFYFANGVALSKDENFV 72 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--------~~~~~~~~~~~pnGi~~~~dg~~L 72 (225)
++++|++++||.||||+... +-.....+ .....|+|++++++.. ..++...++..|+||+++|+...|
T Consensus 136 ~~~~l~~~pDG~Lyvt~G~~--~~~~~~~d--~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l 211 (354)
T 3a9g_A 136 NGGRIRFGPDGMLYITTGDA--ADPRLAQD--LSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVM 211 (354)
T ss_dssp CCCCEEECTTSCEEEECCCT--TCGGGGTC--TTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCE
T ss_pred CCceEEECCCCcEEEEECCC--CCCccccC--CCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCE
Confidence 47899999999999997541 11111111 1235789999998732 246677889999999999944459
Q ss_pred EEEeCCCCE---EEEEEecCCCCC------------ceeEEec--cCCCCCCceEE-------CCCCCEEEEeecCCchh
Q 047259 73 VVCESWKFR---CRRYWLKGPRQG------------RLESFIE--HLPGGPDNINL-------APDGSFWVALIKMNQTG 128 (225)
Q Consensus 73 yv~~~~~~~---I~~~~~~~~~~~------------~~~~~~~--~~~g~Pd~i~~-------d~~G~l~v~~~~~~~~~ 128 (225)
|+++.+.++ |.++.. +...+ ....... .....|.||++ +.+|++|+++..
T Consensus 212 ~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~----- 285 (354)
T 3a9g_A 212 VATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLR----- 285 (354)
T ss_dssp EEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETT-----
T ss_pred EEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcC-----
Confidence 999998765 554432 21111 0011111 11235899999 578999999866
Q ss_pred hhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC--CcEEEEEECCCCCcccceeEEEE-eCCEEEEeeCC-C
Q 047259 129 VRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH--GKIIMDFNDPNATYISFVTSAVE-FEDNLYMASIQ-S 204 (225)
Q Consensus 129 ~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~--G~~~~~~~~p~g~~~~~~t~~~~-~~~~Lyv~~~~-~ 204 (225)
.++|.+++.+ |++...-..-.+. ...+..++. .+|.|||++.. .
T Consensus 286 -------------------------------~~~v~~~~~~~~g~~~~~~~~~~~~-~~rp~~v~~~pDG~lyv~~~~~~ 333 (354)
T 3a9g_A 286 -------------------------------GSMLAAVNFGDNMEVRKISTFFKNV-FGRLRDVVIDDDGGILISTSNRD 333 (354)
T ss_dssp -------------------------------TTEEEEEEECGGGCEEEEEEECTTT-SCCEEEEEECTTSCEEEEECTTS
T ss_pred -------------------------------CCEEEEEEECCCCcccceeeeccCC-CCCeeEEEECCCCcEEEEEeCCC
Confidence 4577777665 5553211111121 234666665 47899999974 3
Q ss_pred C---------eEEEEeCCC
Q 047259 205 K---------FVGKLPLNT 214 (225)
Q Consensus 205 ~---------~i~~~~~~~ 214 (225)
+ +|+|+...+
T Consensus 334 G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 334 GRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp SSSCCCTTCSCEEEEEETT
T ss_pred CCcCCCCCCCEEEEEecCC
Confidence 3 899987543
No 71
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.33 E-value=5.8e-10 Score=93.18 Aligned_cols=157 Identities=10% Similarity=0.036 Sum_probs=109.6
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC--c--------cccceeEEecCCC
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG--F--------YFANGVALSKDEN 70 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~--------~~pnGi~~~~dg~ 70 (225)
|.+++++++|+ +|+++.. .+.|+.+|..++++...... . ..|.+++++|||+
T Consensus 91 ~~~~~~s~dg~~l~v~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 153 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTV-----------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN 153 (353)
T ss_dssp CCSEEEETTTTEEEEEETT-----------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT
T ss_pred cceEEECCCCCEEEEEecC-----------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC
Confidence 67889999986 8888775 56899999887776443322 1 1389999999999
Q ss_pred EEEEEeC-CCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhh
Q 047259 71 FVVVCES-WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPEL 148 (225)
Q Consensus 71 ~Lyv~~~-~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~ 148 (225)
.||++.. ..++|+.+++++. ............|.+++++++|+ +|++..
T Consensus 154 ~l~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-------------------------- 204 (353)
T 3vgz_A 154 TVYISGIGKESVIWVVDGGNI---KLKTAIQNTGKMSTGLALDSEGKRLYTTNA-------------------------- 204 (353)
T ss_dssp EEEEEEESSSCEEEEEETTTT---EEEEEECCCCTTCCCCEEETTTTEEEEECT--------------------------
T ss_pred EEEEEecCCCceEEEEcCCCC---ceEEEecCCCCccceEEECCCCCEEEEEcC--------------------------
Confidence 9999994 4678999998642 22222221233589999999997 566542
Q ss_pred hhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCCc
Q 047259 149 INLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 149 ~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.|..+|.. |+.+..+..+.......+..++. +++.||+++...+.|.++++.+.
T Consensus 205 -----------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 205 -----------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp -----------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred -----------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 3467788875 77777776532211223444444 46789999999999999998653
No 72
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.33 E-value=1.3e-10 Score=97.28 Aligned_cols=153 Identities=14% Similarity=0.109 Sum_probs=111.3
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec-CccccceeEEecCCCEEEEEeCCC
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE-GFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
|++++++++|+ +|+++.+. .+.|+.+|..+++...... ....|++++++|||+.||++.. .
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~ 205 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGK----------------ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-D 205 (353)
T ss_dssp EEEEEEETTTTEEEEEEESS----------------SCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-T
T ss_pred CceEEECCCCCEEEEEecCC----------------CceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-C
Confidence 57789999986 88887431 5789999998887766665 4566999999999999999986 6
Q ss_pred CEEEEEEecCCCCCceeEEecc---CCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 80 FRCRRYWLKGPRQGRLESFIEH---LPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~---~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
+.|+.+++.+.. ....+... ....|.+++++++|+ +|++...
T Consensus 206 ~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------------------------------- 251 (353)
T 3vgz_A 206 GELITIDTADNK--ILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-------------------------------- 251 (353)
T ss_dssp SEEEEEETTTTE--EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--------------------------------
T ss_pred CeEEEEECCCCe--EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--------------------------------
Confidence 799999986421 11111110 123467799999997 7887755
Q ss_pred CCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEE--EeCCEEEEeeCCCCeEEEEeCCCc
Q 047259 156 GNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAV--EFEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 156 ~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~--~~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.|..+|.+ |+++..+..+.. ..+. +++++||+++..++.|.++++.+.
T Consensus 252 ----~~~v~~~d~~~~~~~~~~~~~~~------~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 252 ----AAEVLVVDTRNGNILAKVAAPES------LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp ----SSEEEEEETTTCCEEEEEECSSC------CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ----CCEEEEEECCCCcEEEEEEcCCC------ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 5678889885 788877775432 1233 345679999999999999998653
No 73
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.31 E-value=5.2e-11 Score=100.89 Aligned_cols=146 Identities=12% Similarity=0.044 Sum_probs=96.6
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCC-cEEEEEeCCCCeEEEEe------cCccccceeEEecCCCEEEE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPH-GQLLKYDPELEETTVLH------EGFYFANGVALSKDENFVVV 74 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~-g~v~~~d~~~~~~~~~~------~~~~~pnGi~~~~dg~~Lyv 74 (225)
||||+++++|++|+|++. . +.|++++++...+.... ....++|||+++|||+.|++
T Consensus 139 ~nDvavD~~GnaYVt~s~-----------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv 201 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFAL-----------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIA 201 (334)
T ss_dssp EEEEEECTTSCEEEEEEE-----------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEE
T ss_pred CceeEECCCCCEEEeCCC-----------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEE
Confidence 799999999999999886 3 78999999843344332 12345889999999999999
Q ss_pred EeCCCCEEEEEEecCCCCCceeEEec--c---CCCCCCce-EECCCCCE-EEEeecCCchhhhhhhcChhHHHHHHhhhh
Q 047259 75 CESWKFRCRRYWLKGPRQGRLESFIE--H---LPGGPDNI-NLAPDGSF-WVALIKMNQTGVRAIQSCPDKWKLLQAYPE 147 (225)
Q Consensus 75 ~~~~~~~I~~~~~~~~~~~~~~~~~~--~---~~g~Pd~i-~~d~~G~l-~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~ 147 (225)
+++ .++|++|+++.. ...++-.. + ....|++| ....+|++ +|++..
T Consensus 202 ~~~-~g~L~~fD~~~p--v~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~------------------------ 254 (334)
T 2p9w_A 202 FGG-PRALTAFDVSKP--YAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA------------------------ 254 (334)
T ss_dssp ESS-SSSEEEEECSSS--SCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET------------------------
T ss_pred EcC-CCeEEEEcCCCC--cceeecccccCCcccccCcccccccccCCEEEEEEcCC------------------------
Confidence 999 999999998732 11011111 1 12258996 66778987 777755
Q ss_pred hhhhhccCCCCcceEEEEECCCC-cEEEEEEC-CCCCcccceeEEEE----eCCEEEEeeCC
Q 047259 148 LINLLIPLGNDAGARIVKVDTHG-KIIMDFND-PNATYISFVTSAVE----FEDNLYMASIQ 203 (225)
Q Consensus 148 ~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~-p~g~~~~~~t~~~~----~~~~Lyv~~~~ 203 (225)
.+.++..+.|| +.-..+.. |..-...+++..+. .+++||+.+..
T Consensus 255 ------------~~~~~l~S~DgW~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 255 ------------PYAISFRSWDNWKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp ------------TEEEEEECSSTTSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECC
T ss_pred ------------CCEEEEECCCCcceeEEeeeecCccccCceeEEEEeccccCCeEEEEeee
Confidence 45677788887 11122211 21100234555544 57999999843
No 74
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.30 E-value=2.2e-10 Score=96.96 Aligned_cols=160 Identities=14% Similarity=0.141 Sum_probs=103.0
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcE--EEEEeCCCC----e-E-------EEEecCccccceeEEe
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQ--LLKYDPELE----E-T-------TVLHEGFYFANGVALS 66 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~--v~~~d~~~~----~-~-------~~~~~~~~~pnGi~~~ 66 (225)
|+.++++|||+ ||+++.. .+. +|.++..++ + + .........|.+++|+
T Consensus 157 ~~~~~~spdg~~l~~~~~~-----------------~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s 219 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLG-----------------TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFN 219 (361)
T ss_dssp EEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEEC
T ss_pred ceEEEECCCCCEEEEEeCC-----------------CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEc
Confidence 36699999997 8998765 344 455555433 2 2 2223455679999999
Q ss_pred cCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCC---CCCCceEECCCCC-EEEEeec-CCchhhhhhhcChhHHHH
Q 047259 67 KDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLP---GGPDNINLAPDGS-FWVALIK-MNQTGVRAIQSCPDKWKL 141 (225)
Q Consensus 67 ~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~---g~Pd~i~~d~~G~-l~v~~~~-~~~~~~~~~~~~~~~r~~ 141 (225)
|||++||++....+.|..|+++++.......+. ..+ ..|.+++++++|+ ||++... ..
T Consensus 220 pdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~-~~~~~~~~~~~i~~spdg~~l~v~~~~~~~---------------- 282 (361)
T 3scy_A 220 SDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA-ADTVNAQGSGDIHLSPDGKYLYASNRLKAD---------------- 282 (361)
T ss_dssp TTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE-SCSSCCCCEEEEEECTTSSEEEEEECSSSC----------------
T ss_pred CCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe-cCCCCCCCcccEEECCCCCEEEEECCCCCC----------------
Confidence 999999999988899999998743111111111 111 2366999999998 6676644 11
Q ss_pred HHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCCcc
Q 047259 142 LQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 142 ~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.-.|+.+++ +|++...-..+.+. .+..++. ++..||+++..++.|.++.++.+.
T Consensus 283 ------------------~i~v~~~~~~~g~~~~~~~~~~g~---~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~ 339 (361)
T 3scy_A 283 ------------------GVAIFKVDETNGTLTKVGYQLTGI---HPRNFIITPNGKYLLVACRDTNVIQIFERDQAT 339 (361)
T ss_dssp ------------------EEEEEEECTTTCCEEEEEEEECSS---CCCEEEECTTSCEEEEEETTTTEEEEEEECTTT
T ss_pred ------------------EEEEEEEcCCCCcEEEeeEecCCC---CCceEEECCCCCEEEEEECCCCCEEEEEEECCC
Confidence 456777875 46643332222232 2344444 356799999899999997776443
No 75
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.30 E-value=5.7e-11 Score=98.20 Aligned_cols=158 Identities=10% Similarity=0.051 Sum_probs=111.9
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
+.+++++ .++||+++.. .+.++.+|..+.++.....-. .|.|+.+++||++||+++ ++++
T Consensus 68 geGi~~~-g~~lyv~t~~-----------------~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~ 127 (266)
T 2iwa_A 68 GEGLTLL-NEKLYQVVWL-----------------KNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSI 127 (266)
T ss_dssp EEEEEEE-TTEEEEEETT-----------------CSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSE
T ss_pred eEEEEEe-CCEEEEEEec-----------------CCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCe
Confidence 4455665 3478888765 679999998877655444322 588899999999999999 6899
Q ss_pred EEEEEecCCCCCceeEEecc--CC-CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 82 CRRYWLKGPRQGRLESFIEH--LP-GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 82 I~~~~~~~~~~~~~~~~~~~--~~-g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
|+.+|+++... ...+-... .+ ..|+++.+. +|.+|++.+.
T Consensus 128 l~viD~~t~~v-~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~----------------------------------- 170 (266)
T 2iwa_A 128 LYEIDPHTFKL-IKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ----------------------------------- 170 (266)
T ss_dssp EEEECTTTCCE-EEEEECEETTEECCCEEEEEEE-TTEEEEEETT-----------------------------------
T ss_pred EEEEECCCCcE-EEEEEECCCCcccccceeEEEE-CCEEEEecCC-----------------------------------
Confidence 99999875311 11111111 11 247788888 7899998866
Q ss_pred cceEEEEECCC-CcEEEEEECCCC--------C-cccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCccc
Q 047259 159 AGARIVKVDTH-GKIIMDFNDPNA--------T-YISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEA 217 (225)
Q Consensus 159 ~~~~V~~~d~~-G~~~~~~~~p~g--------~-~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~ 217 (225)
...|.++|+. |+++..+..+.. . ....+.+++.. +++|||+.-..++|.++++.+..+
T Consensus 171 -~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~~ 240 (266)
T 2iwa_A 171 -TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVRH 240 (266)
T ss_dssp -SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECCS
T ss_pred -CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecccC
Confidence 4689999995 899999976310 0 01235666654 579999999999999999877653
No 76
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.30 E-value=2.1e-10 Score=94.34 Aligned_cols=153 Identities=13% Similarity=0.069 Sum_probs=111.4
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE-ecCccccceeEEecCCCEEEEEeCCC
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL-HEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
|.+++.++ ++.||++... .|.|.++|.+++++... .....+..||+++ ++.||++....
T Consensus 56 ftqGL~~~-~~~Ly~stG~-----------------~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~ 115 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGH-----------------QGTLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTWTE 115 (268)
T ss_dssp CEEEEEEE-TTEEEEEETT-----------------TTEEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEESSS
T ss_pred ccceEEEE-CCEEEEEcCC-----------------CCEEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEccC
Confidence 55788887 5789999775 56799999988875443 3444456778776 45699999999
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
+.++.||.++. .....|. .++.+-|++.|. ++||+++ +
T Consensus 116 ~~v~V~D~~Tl--~~~~ti~--~~~eGwGLt~Dg-~~L~vSd-G------------------------------------ 153 (268)
T 3nok_A 116 GLLFTWSGMPP--QRERTTR--YSGEGWGLCYWN-GKLVRSD-G------------------------------------ 153 (268)
T ss_dssp CEEEEEETTTT--EEEEEEE--CSSCCCCEEEET-TEEEEEC-S------------------------------------
T ss_pred CEEEEEECCcC--cEEEEEe--CCCceeEEecCC-CEEEEEC-C------------------------------------
Confidence 99999998642 2222222 234456777764 4799988 4
Q ss_pred ceEEEEECCC-CcEEEEEECC-CCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCCc
Q 047259 160 GARIVKVDTH-GKIIMDFNDP-NATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p-~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
...|..+|++ ++++..+... ++..+..++.+...+|+||+..+.++.|.+++..+.
T Consensus 154 s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG 211 (268)
T 3nok_A 154 GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATG 211 (268)
T ss_dssp SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTC
T ss_pred CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCC
Confidence 3489999997 6888887653 344455667777779999999999999999998654
No 77
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.29 E-value=4.6e-10 Score=94.39 Aligned_cols=159 Identities=14% Similarity=0.079 Sum_probs=108.1
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec---CccccceeEEecCCCEEEEEeCC
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE---GFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~---~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
|..+++++||+||+++... ..+.|+.|+.++++.+.+.. ....|.+|+++|||++||++...
T Consensus 42 p~~~a~spdg~l~~~~~~~---------------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~ 106 (347)
T 3hfq_A 42 PTYLALSAKDCLYSVDKED---------------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH 106 (347)
T ss_dssp CCCEEECTTCEEEEEEEET---------------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT
T ss_pred cceEEEccCCeEEEEEecC---------------CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC
Confidence 6789999999999886520 15678888876676655432 46789999999999999999988
Q ss_pred CCEEEEEEecCCCCCceeEEec--cCC---------CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhh
Q 047259 79 KFRCRRYWLKGPRQGRLESFIE--HLP---------GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPE 147 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~--~~~---------g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~ 147 (225)
.+.|..++++.. +..+.... ... ..|..++++++|++|+++....
T Consensus 107 ~~~v~v~~~~~~--g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~---------------------- 162 (347)
T 3hfq_A 107 KGTAEVMKIAAD--GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD---------------------- 162 (347)
T ss_dssp TTEEEEEEECTT--SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT----------------------
T ss_pred CCEEEEEEeCCC--CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC----------------------
Confidence 899999998531 12222211 111 1245799999999988876621
Q ss_pred hhhhhccCCCCcceEEEEECCCCcEEEE--EECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCC
Q 047259 148 LINLLIPLGNDAGARIVKVDTHGKIIMD--FNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 148 ~~~~~~~~~~~~~~~V~~~d~~G~~~~~--~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.-.++.++++|++... +..+.+. .+..++. ++..||+++...+.|.+++++.
T Consensus 163 ------------~v~~~~~~~~g~~~~~~~~~~~~g~---~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 163 ------------KVYVYNVSDAGQLSEQSVLTMEAGF---GPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp ------------EEEEEEECTTSCEEEEEEEECCTTC---CEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ------------EEEEEEECCCCcEEEeeeEEcCCCC---CCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 3455666666765433 3443342 3444544 3456999999999998888774
No 78
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.28 E-value=1.7e-10 Score=99.12 Aligned_cols=181 Identities=9% Similarity=0.096 Sum_probs=109.5
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCC--CCeEEEE-ecC------ccccceeEEec--CCC
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPE--LEETTVL-HEG------FYFANGVALSK--DEN 70 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~--~~~~~~~-~~~------~~~pnGi~~~~--dg~ 70 (225)
|+|++++++|.+|++......|...+ .....|+|+++|++ +++.+.+ ..+ .-.|.||.+.+ |++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~-----~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~ 126 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSF-----DPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNT 126 (355)
T ss_dssp CCEEEECTTSEEEEEECCC----------------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCC
T ss_pred cceeEEcCCCeEEEEeccccCCCccc-----CCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCc
Confidence 78999999999999974211122111 11358999999986 3344443 222 24899999977 354
Q ss_pred -EEEEEeCC--CCEEEEEEecCCCCCceeEEecc---C-CCCCCceEECCCCCEEEEeec-CCchhhhhhhcChhHHHHH
Q 047259 71 -FVVVCESW--KFRCRRYWLKGPRQGRLESFIEH---L-PGGPDNINLAPDGSFWVALIK-MNQTGVRAIQSCPDKWKLL 142 (225)
Q Consensus 71 -~Lyv~~~~--~~~I~~~~~~~~~~~~~~~~~~~---~-~g~Pd~i~~d~~G~l~v~~~~-~~~~~~~~~~~~~~~r~~~ 142 (225)
+|||++.. ..+|-.|+.+.. +...+++.. . -..|++++++++|++|+++.- +.. +.++. .
T Consensus 127 ~~L~Vvnh~~~~s~ielf~~d~~--~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd---------~~~~~-~ 194 (355)
T 3sre_A 127 VYLLVVNHPGSSSTVEVFKFQEE--EKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFID---------PYLKS-W 194 (355)
T ss_dssp EEEEEEECSTTCCEEEEEEEETT--TTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSS---------HHHHH-H
T ss_pred EEEEEEECCCCCCeEEEEEEECC--CCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCC---------ccccc-c
Confidence 69999877 345444444321 122233322 1 236899999999999999753 221 11111 0
Q ss_pred HhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCc
Q 047259 143 QAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 143 ~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
. .+. ..+ .+.|++++++ ++. .+.. + +..+++++.. +++|||++....+|.+|++++.
T Consensus 195 e-------~~~-~~~--~g~vyr~d~~-~~~-~~~~--~--l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~ 253 (355)
T 3sre_A 195 E-------MHL-GLA--WSFVTYYSPN-DVR-VVAE--G--FDFANGINISPDGKYVYIAELLAHKIHVYEKHAN 253 (355)
T ss_dssp H-------HHT-TCC--CEEEEEECTT-CCE-EEEE--E--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred h-------hhc-cCC--ccEEEEEECC-eEE-Eeec--C--CcccCcceECCCCCEEEEEeCCCCeEEEEEECCC
Confidence 0 000 122 7899999984 443 3322 2 3446666653 5799999999999999998753
No 79
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.23 E-value=3.8e-10 Score=91.86 Aligned_cols=163 Identities=13% Similarity=0.131 Sum_probs=107.3
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
..++++. .++||..+.. .+.++.||.++.++....... +.|..+++|++.||+++ ++++
T Consensus 67 geGi~~~-~~~ly~ltw~-----------------~~~v~v~D~~tl~~~~ti~~~--~~Gwglt~dg~~L~vSd-gs~~ 125 (243)
T 3mbr_X 67 GAGIVAW-RDRLIQLTWR-----------------NHEGFVYDLATLTPRARFRYP--GEGWALTSDDSHLYMSD-GTAV 125 (243)
T ss_dssp EEEEEEE-TTEEEEEESS-----------------SSEEEEEETTTTEEEEEEECS--SCCCEEEECSSCEEEEC-SSSE
T ss_pred eeEEEEe-CCEEEEEEee-----------------CCEEEEEECCcCcEEEEEeCC--CCceEEeeCCCEEEEEC-CCCe
Confidence 3455555 3578887654 679999999877655544332 35666667888899999 5899
Q ss_pred EEEEEecCCC-CCceeEEeccCC-CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 82 CRRYWLKGPR-QGRLESFIEHLP-GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 82 I~~~~~~~~~-~~~~~~~~~~~~-g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
|+.+|+++.. .+..++-....+ ..++.+... +|+||+..+.
T Consensus 126 l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~------------------------------------ 168 (243)
T 3mbr_X 126 IRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL------------------------------------ 168 (243)
T ss_dssp EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT------------------------------------
T ss_pred EEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC------------------------------------
Confidence 9999987531 111111110011 234556655 7899988876
Q ss_pred ceEEEEECCC-CcEEEEEECCCC---------CcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcccccCCC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNA---------TYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAELAPK 222 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g---------~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~~~~~ 222 (225)
...|.++|+. |+++..+..+.- .....+++++.+ +++|||+.-.-+++..+++.....+++-|
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~~~~~~~~~~ 243 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLTPLPHAAAGK 243 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEECCCCC-----
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEecCCccccCC
Confidence 3489999996 999999874310 012245666654 69999999999999999998877666543
No 80
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.23 E-value=2.3e-09 Score=89.07 Aligned_cols=163 Identities=14% Similarity=0.161 Sum_probs=108.5
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCC-cEEEEEeCCCCeE----EEEecCccccceeEEecCCCEEEEE
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPH-GQLLKYDPELEET----TVLHEGFYFANGVALSKDENFVVVC 75 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~-g~v~~~d~~~~~~----~~~~~~~~~pnGi~~~~dg~~Lyv~ 75 (225)
|+++++++||+ +|+++.... . -.+|.++.+ +.+ .........|.+++++|||++||++
T Consensus 130 ~~~~~~spdg~~l~~~~~~~~---------------~~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRSSA---------------NTVRRFKIDAD-GVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp EEEEEECTTSSCEEEEEETTT---------------TEEEEEEECTT-CCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred ccceEECCCCCEEEEEecCCC---------------ceEEEEEECCC-CcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 57899999996 888876511 2 245555543 333 2223445679999999999999999
Q ss_pred eCCCCEEEEEEecCCCC-CceeEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhc
Q 047259 76 ESWKFRCRRYWLKGPRQ-GRLESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLI 153 (225)
Q Consensus 76 ~~~~~~I~~~~~~~~~~-~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~ 153 (225)
....+.|..+++++... .....+. ....|.+++++++|+ +|++...
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~------------------------------ 241 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTES------------------------------ 241 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSS------------------------------
T ss_pred eCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcC------------------------------
Confidence 99999999999875322 1022221 345789999999998 7777654
Q ss_pred cCCCCcceEEEEECCC-CcE--EEEEECC---CCCcccceeEEE--EeCCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 154 PLGNDAGARIVKVDTH-GKI--IMDFNDP---NATYISFVTSAV--EFEDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 154 ~~~~~~~~~V~~~d~~-G~~--~~~~~~p---~g~~~~~~t~~~--~~~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.+.|..+|.+ |++ +..+... ..........++ +++..||+++..++.|.++++.+....
T Consensus 242 ------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 242 ------TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG 308 (331)
T ss_dssp ------EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE
T ss_pred ------CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc
Confidence 5678888876 666 3333321 011111112233 356789999999999999999876543
No 81
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.20 E-value=8.3e-10 Score=90.68 Aligned_cols=155 Identities=10% Similarity=0.069 Sum_probs=106.2
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
..+++++ .++||+.+.. .+.++.||.++.++.....-. +.|..+++|++.||+++ ++++
T Consensus 89 geGit~~-g~~ly~ltw~-----------------~~~v~v~D~~t~~~~~ti~~~--~eG~glt~dg~~L~~Sd-Gs~~ 147 (262)
T 3nol_A 89 GEGISDW-KDKIVGLTWK-----------------NGLGFVWNIRNLRQVRSFNYD--GEGWGLTHNDQYLIMSD-GTPV 147 (262)
T ss_dssp EEEEEEE-TTEEEEEESS-----------------SSEEEEEETTTCCEEEEEECS--SCCCCEEECSSCEEECC-SSSE
T ss_pred eeEEEEe-CCEEEEEEee-----------------CCEEEEEECccCcEEEEEECC--CCceEEecCCCEEEEEC-CCCe
Confidence 3456665 3478888664 679999999877655444332 36677777888999999 4789
Q ss_pred EEEEEecCCC-CCceeEEeccCC-CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 82 CRRYWLKGPR-QGRLESFIEHLP-GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 82 I~~~~~~~~~-~~~~~~~~~~~~-g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
|+.+|+++.. .+...+-....+ ..++.+.+. +|+||++.+.
T Consensus 148 i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~------------------------------------ 190 (262)
T 3nol_A 148 LRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ------------------------------------ 190 (262)
T ss_dssp EEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT------------------------------------
T ss_pred EEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc------------------------------------
Confidence 9999987531 111111110111 234557776 7899998877
Q ss_pred ceEEEEECCC-CcEEEEEECCCCC--------cccceeEEEEe--CCEEEEeeCCCCeEEEEeCCC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNAT--------YISFVTSAVEF--EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~--------~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
...|.++|+. |+++..+..+.-. ....+++++.+ +++|||+.-.-+++..+++..
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~~ 256 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLTQ 256 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEec
Confidence 4589999996 9999999874210 01245667754 699999999999999998754
No 82
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.17 E-value=8.8e-10 Score=90.65 Aligned_cols=154 Identities=10% Similarity=0.102 Sum_probs=105.7
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
..+++++. ++||+.+.. .+.++.||.++.++...... .+.|..+++|++.||+++ ++++
T Consensus 98 geGit~~g-~~Ly~ltw~-----------------~~~v~V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSd-Gs~~ 156 (268)
T 3nok_A 98 AEGLASDG-ERLYQLTWT-----------------EGLLFTWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSD-GGTM 156 (268)
T ss_dssp EEEEEECS-SCEEEEESS-----------------SCEEEEEETTTTEEEEEEEC--SSCCCCEEEETTEEEEEC-SSSE
T ss_pred eeEEEEeC-CEEEEEEcc-----------------CCEEEEEECCcCcEEEEEeC--CCceeEEecCCCEEEEEC-CCCE
Confidence 45566653 479998664 67999999987776554443 245666667788999999 5899
Q ss_pred EEEEEecCCC-CCceeEEeccCC-CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 82 CRRYWLKGPR-QGRLESFIEHLP-GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 82 I~~~~~~~~~-~~~~~~~~~~~~-g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
|+.+|+++.. .....+-....+ ..++.+.+. +|+||++.+.
T Consensus 157 l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~------------------------------------ 199 (268)
T 3nok_A 157 LTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWH------------------------------------ 199 (268)
T ss_dssp EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT------------------------------------
T ss_pred EEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECC------------------------------------
Confidence 9999987531 111111110011 134667776 7899998876
Q ss_pred ceEEEEECCC-CcEEEEEECCC---------CCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPN---------ATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~---------g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~ 213 (225)
...|.++|++ |+++..+.... ......+++++.+ +++|||+.-.-++++.++++
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~~ 265 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRLD 265 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEEE
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEEE
Confidence 4589999996 99999987531 0012245667754 68999999999999998873
No 83
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.17 E-value=1.6e-09 Score=90.07 Aligned_cols=158 Identities=18% Similarity=0.139 Sum_probs=108.1
Q ss_pred CCc-EEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCC
Q 047259 2 TND-VIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKF 80 (225)
Q Consensus 2 pnd-v~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~ 80 (225)
|.. +++++||+..++.... ...+.|+.+|..+++..........|++++++|||++||+++...+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~--------------~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 150 (331)
T 3u4y_A 85 SMADVDITPDDQFAVTVTGL--------------NHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSA 150 (331)
T ss_dssp CCCCEEECTTSSEEEECCCS--------------SSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTT
T ss_pred CccceEECCCCCEEEEecCC--------------CCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCC
Confidence 345 8888888744443320 1123899999987877666666678999999999999999998877
Q ss_pred E-EEEEEecCC-CCCce-eEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 81 R-CRRYWLKGP-RQGRL-ESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 81 ~-I~~~~~~~~-~~~~~-~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
. |..|+++.. ..... .... .....|.+++++++|+ +|++...
T Consensus 151 ~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~--------------------------------- 196 (331)
T 3u4y_A 151 NTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLI--------------------------------- 196 (331)
T ss_dssp TEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETT---------------------------------
T ss_pred ceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCC---------------------------------
Confidence 8 888888642 11111 1111 1234689999999998 8888765
Q ss_pred CCcceEEEEECCC-CcE---EEEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCCc
Q 047259 157 NDAGARIVKVDTH-GKI---IMDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 157 ~~~~~~V~~~d~~-G~~---~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.|..+|.+ |+. +..+... . .+..++. ++..||+++...+.|.++++.+.
T Consensus 197 ---~~~v~v~d~~~~~~~~~~~~~~~~--~---~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 197 ---GNSIGILETQNPENITLLNAVGTN--N---LPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp ---TTEEEEEECSSTTSCEEEEEEECS--S---CCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred ---CCeEEEEECCCCcccceeeeccCC--C---CCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 4567777764 676 6666542 1 2333443 35669999988889999998754
No 84
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.16 E-value=2.8e-09 Score=90.80 Aligned_cols=164 Identities=12% Similarity=0.066 Sum_probs=103.8
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCC-CCeEEEEe--c---CccccceeEEecCCCEEEE
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPE-LEETTVLH--E---GFYFANGVALSKDENFVVV 74 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~~~~--~---~~~~pnGi~~~~dg~~Lyv 74 (225)
|++++++|||+ ||+++.+ .+.|+.|+.+ +|+++.+. . ....|.+++|+|||++||+
T Consensus 147 ~~~~~~spdG~~l~~~~~~-----------------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v 209 (365)
T 1jof_A 147 IHGMVFDPTETYLYSADLT-----------------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYA 209 (365)
T ss_dssp EEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEE
T ss_pred ceEEEECCCCCEEEEEcCC-----------------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEE
Confidence 67889999996 7777764 4577777765 57665431 1 2467999999999999999
Q ss_pred EeCCCCEEEEEEecCCCCCcee----EEeccCC----C---------CCCceE-ECCCCC-EEEEeecCCchhhhhhhcC
Q 047259 75 CESWKFRCRRYWLKGPRQGRLE----SFIEHLP----G---------GPDNIN-LAPDGS-FWVALIKMNQTGVRAIQSC 135 (225)
Q Consensus 75 ~~~~~~~I~~~~~~~~~~~~~~----~~~~~~~----g---------~Pd~i~-~d~~G~-l~v~~~~~~~~~~~~~~~~ 135 (225)
+....+.|..|+++.. .+... .+. ..+ + .|.+++ +++||+ ||++..+....
T Consensus 210 ~~~~~~~v~v~~~~~~-~g~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~-------- 279 (365)
T 1jof_A 210 LMEAGNRICEYVIDPA-THMPVYTHHSFP-LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFE-------- 279 (365)
T ss_dssp EETTTTEEEEEEECTT-TCCEEEEEEEEE-SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTT--------
T ss_pred EECCCCeEEEEEEeCC-CCcEEEccceEE-cCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCC--------
Confidence 9988888888877521 12221 111 121 1 367899 999997 67777552100
Q ss_pred hhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEE---EECCCCCcccceeEEEE---eCCEEEEeeCCCCeEEE
Q 047259 136 PDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMD---FNDPNATYISFVTSAVE---FEDNLYMASIQSKFVGK 209 (225)
Q Consensus 136 ~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~---~~~p~g~~~~~~t~~~~---~~~~Lyv~~~~~~~i~~ 209 (225)
... .-.|+.++++|++... +..+... .. .-.+.+ ++++||+++..++.|.+
T Consensus 280 -------------------~~~--~i~v~~~~~~g~~~~~~~~~~~~~~~-~~-~~a~sp~~~dg~~l~v~~~~~~~v~v 336 (365)
T 1jof_A 280 -------------------LQG--YIAGFKLRDCGSIEKQLFLSPTPTSG-GH-SNAVSPCPWSDEWMAITDDQEGWLEI 336 (365)
T ss_dssp -------------------SCC--EEEEEEECTTSCEEEEEEEEECSSCC-TT-CCCEEECTTCTTEEEEECSSSCEEEE
T ss_pred -------------------CCC--eEEEEEECCCCCEEEeeeeeecCCCC-cc-cceecCCCcCCCEEEEEEcCCCeEEE
Confidence 000 2346666667887543 3222111 11 112335 57899999988899988
Q ss_pred EeCCCc
Q 047259 210 LPLNTP 215 (225)
Q Consensus 210 ~~~~~~ 215 (225)
++++..
T Consensus 337 ~~~~~~ 342 (365)
T 1jof_A 337 YRWKDE 342 (365)
T ss_dssp EEEETT
T ss_pred EEEchh
Confidence 877654
No 85
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.14 E-value=3.3e-09 Score=87.74 Aligned_cols=150 Identities=15% Similarity=0.113 Sum_probs=104.5
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeCC-
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCESW- 78 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~~- 78 (225)
++++++.++|+|+++. .+.|+.+|+ +|+..-.... ....+++.+.+||+ ++|+++.
T Consensus 39 ~~~~~~~pdG~ilvs~-------------------~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~ 97 (276)
T 3no2_A 39 CNSVAATKAGEILFSY-------------------SKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN-ALVAWCGH 97 (276)
T ss_dssp CCEEEECTTSCEEEEC-------------------BSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC-EEEEEEST
T ss_pred CcCeEECCCCCEEEeC-------------------CCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC-EEEEecCC
Confidence 5788889999988842 246888888 4653322221 23456788999998 7778777
Q ss_pred CCEEEEEEecCCCCCceeEEeccC---CCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 79 KFRCRRYWLKGPRQGRLESFIEHL---PGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~~~---~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
.++|+.++.++..+-... +.... ...|.+++++++|+++++...
T Consensus 98 ~~~v~~vd~~Gk~l~~~~-~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-------------------------------- 144 (276)
T 3no2_A 98 PSTILEVNMKGEVLSKTE-FETGIERPHAQFRQINKNKKGNYLVPLFA-------------------------------- 144 (276)
T ss_dssp TEEEEEECTTSCEEEEEE-ECCSCSSGGGSCSCCEECTTSCEEEEETT--------------------------------
T ss_pred CCEEEEEeCCCCEEEEEe-ccCCCCcccccccCceECCCCCEEEEecC--------------------------------
Confidence 889999987653111111 11111 124778899999999998876
Q ss_pred CCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCC
Q 047259 156 GNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~ 213 (225)
.+.|..+|++|+++..+..+. . . .+.....+|.++|++..+++|..++..
T Consensus 145 ----~~~v~~~d~~G~~~w~~~~~~-~-~--~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 145 ----TSEVREIAPNGQLLNSVKLSG-T-P--FSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp ----TTEEEEECTTSCEEEEEECSS-C-C--CEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred ----CCEEEEECCCCCEEEEEECCC-C-c--cceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 568999999999999998742 2 1 122233578899999888899999887
No 86
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.13 E-value=4.6e-09 Score=88.50 Aligned_cols=152 Identities=15% Similarity=0.151 Sum_probs=105.4
Q ss_pred CCcEEEcCC-CcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCC
Q 047259 2 TNDVIEASD-GSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKF 80 (225)
Q Consensus 2 pndv~~~~d-G~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~ 80 (225)
+++++++++ +.+|+++.. .+.|+++|.++++.+... ....+.+|++++||+ +|++. .+
T Consensus 51 ~egp~~~~~~~~l~~~d~~-----------------~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~-l~v~~--~~ 109 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNIL-----------------ERELHELHLASGRKTVHA-LPFMGSALAKISDSK-QLIAS--DD 109 (326)
T ss_dssp EEEEEEETTTTEEEEEEGG-----------------GTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTE-EEEEE--TT
T ss_pred CcCCeEeCCCCEEEEEECC-----------------CCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCe-EEEEE--CC
Confidence 467888886 679999775 568999999877766543 235689999999987 77775 34
Q ss_pred EEEEEEecCCCCCceeEEeccCC----CCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 81 RCRRYWLKGPRQGRLESFIEHLP----GGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 81 ~I~~~~~~~~~~~~~~~~~~~~~----g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
.|++++++++ ..+.+..... ..+..+++|++|++|++...... ..
T Consensus 110 gl~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~----------------------------~~ 158 (326)
T 2ghs_A 110 GLFLRDTATG---VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA----------------------------ET 158 (326)
T ss_dssp EEEEEETTTC---CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC----------------------------CT
T ss_pred CEEEEECCCC---cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC----------------------------CC
Confidence 6999998643 3333332111 24678999999999998765210 01
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCC
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~ 213 (225)
..+.|++++ +|++...... ...+..++.. ++.||+++...+.|.+++++
T Consensus 159 --~~~~l~~~~-~g~~~~~~~~-----~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 159 --GAGSIYHVA-KGKVTKLFAD-----ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp --TCEEEEEEE-TTEEEEEEEE-----ESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred --CceEEEEEe-CCcEEEeeCC-----CcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 157899999 7876543321 1234455543 45799999989999999986
No 87
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.12 E-value=2.1e-09 Score=94.56 Aligned_cols=148 Identities=9% Similarity=0.040 Sum_probs=98.0
Q ss_pred CCC-cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeC---------C
Q 047259 9 SDG-SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCES---------W 78 (225)
Q Consensus 9 ~dG-~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~---------~ 78 (225)
+++ ++|+++.... .. .+.|..+|..++++...+.-...| ||+++|||++|||+++ .
T Consensus 82 ~~~~~vyV~n~~~~------------~~-~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~ 147 (426)
T 3c75_H 82 PDARRVYIQDPAHF------------AA-ITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKR 147 (426)
T ss_dssp CCTTEEEEEECTTT------------CS-SEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred CCCCEEEEECCCcC------------CC-CCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCC
Confidence 355 6999988511 01 189999999888877666666789 9999999999999996 4
Q ss_pred CCEEEEEEecCCCCCceeEEecc-----CCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhh
Q 047259 79 KFRCRRYWLKGPRQGRLESFIEH-----LPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLL 152 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~~-----~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~ 152 (225)
.+.|..||..+...- .++-... ....|.++++++||+ +||+....
T Consensus 148 ~~~VsviD~~t~~vv-~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~---------------------------- 198 (426)
T 3c75_H 148 TDYVEVFDPVTFLPI-ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP---------------------------- 198 (426)
T ss_dssp EEEEEEECTTTCCEE-EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS----------------------------
T ss_pred CCEEEEEECCCCcEE-EEEECCCccccccCCCcceEEEcCCCCEEEEEecCC----------------------------
Confidence 578999988653111 1111110 023699999999996 88887541
Q ss_pred ccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeC
Q 047259 153 IPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPL 212 (225)
Q Consensus 153 ~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~ 212 (225)
.+.|.++|.. ++++..+..+.. ..+.+.+.+.|++...++++.++.+
T Consensus 199 -------~~~VsVID~~t~kvv~~I~v~g~------~~~~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 199 -------APAVGVVDLEGKTFDRMLDVPDC------YHIFPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp -------SCEEEEEETTTTEEEEEEECCSE------EEEEEEETTEEEEEETTSSEEEEEC
T ss_pred -------CCeEEEEECCCCeEEEEEEcCCc------eeeccCCCcEEEEEcCCCCEEEEEC
Confidence 4578999986 788888886432 1122333345555555555555544
No 88
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.10 E-value=6.1e-09 Score=86.29 Aligned_cols=162 Identities=11% Similarity=0.134 Sum_probs=100.7
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCC---eEEEEecCccccceeEEecCCCEEEEEeC
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELE---ETTVLHEGFYFANGVALSKDENFVVVCES 77 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~---~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~ 77 (225)
|.++++.++|+ ||++... .+.|..||..++ +..........+++++++|||+.||++..
T Consensus 86 ~~~~~~s~dg~~l~~~~~~-----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 148 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYN-----------------AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL 148 (343)
T ss_dssp CSEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG
T ss_pred CcEEEEcCCCCEEEEEecC-----------------CCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC
Confidence 67788888886 7777654 456666665223 23333455667999999999999999998
Q ss_pred CCCEEEEEEecC-CCCCcee--EEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhc
Q 047259 78 WKFRCRRYWLKG-PRQGRLE--SFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLI 153 (225)
Q Consensus 78 ~~~~I~~~~~~~-~~~~~~~--~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~ 153 (225)
..+.|..|+++. ....... .+.......|.+++++++|+ +|++.....
T Consensus 149 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~---------------------------- 200 (343)
T 1ri6_A 149 KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS---------------------------- 200 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT----------------------------
T ss_pred CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC----------------------------
Confidence 889999999874 2111111 11111233688999999998 777764410
Q ss_pred cCCCCcceEEEEECC-CCcE--EEEEE-CCCCC-cccceeEEEEe--CCEEEEeeCCCCeEEEEeCCC
Q 047259 154 PLGNDAGARIVKVDT-HGKI--IMDFN-DPNAT-YISFVTSAVEF--EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 154 ~~~~~~~~~V~~~d~-~G~~--~~~~~-~p~g~-~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.-.++.++. .|++ ...+. .+.+. ....+..++.. +..||++....+.|.++++..
T Consensus 201 ------~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 201 ------SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp ------EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred ------EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 223344433 3443 23333 23220 01234445443 568999988889999998873
No 89
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.09 E-value=1.5e-08 Score=83.72 Aligned_cols=153 Identities=16% Similarity=0.134 Sum_probs=106.2
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeE-EEE-e-----cCccccceeEEecCCCEEEEEe
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEET-TVL-H-----EGFYFANGVALSKDENFVVVCE 76 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~-~~~-~-----~~~~~pnGi~~~~dg~~Lyv~~ 76 (225)
++.+.+||++++++... .++|+.+|++ |+. ... . .....|.+++.+++|+ ++++.
T Consensus 81 ~~~~~~dG~~lv~~~~~----------------~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~ 142 (276)
T 3no2_A 81 TARILPDGNALVAWCGH----------------PSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPL 142 (276)
T ss_dssp EEEECTTSCEEEEEEST----------------TEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEE
T ss_pred ccEECCCCCEEEEecCC----------------CCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCC-EEEEe
Confidence 45566777777775531 5688888885 543 222 1 1224678899999998 77888
Q ss_pred CCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 77 SWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 77 ~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
..+++|..|+.+|. . ++.-..++.|.+..+.++|+++++...
T Consensus 143 ~~~~~v~~~d~~G~----~-~w~~~~~~~~~~~~~~~~g~~~v~~~~--------------------------------- 184 (276)
T 3no2_A 143 FATSEVREIAPNGQ----L-LNSVKLSGTPFSSAFLDNGDCLVACGD--------------------------------- 184 (276)
T ss_dssp TTTTEEEEECTTSC----E-EEEEECSSCCCEEEECTTSCEEEECBT---------------------------------
T ss_pred cCCCEEEEECCCCC----E-EEEEECCCCccceeEcCCCCEEEEeCC---------------------------------
Confidence 89999999998752 1 222123456889999999999998876
Q ss_pred CCcceEEEEECCC-CcEEEEEECC--CCCcccceeEEEE-eCCEEEEeeCC----------CCeEEEEeCCCc
Q 047259 157 NDAGARIVKVDTH-GKIIMDFNDP--NATYISFVTSAVE-FEDNLYMASIQ----------SKFVGKLPLNTP 215 (225)
Q Consensus 157 ~~~~~~V~~~d~~-G~~~~~~~~p--~g~~~~~~t~~~~-~~~~Lyv~~~~----------~~~i~~~~~~~~ 215 (225)
.++|..+|++ |+++..+... .+..+..++.+.. .+|.+|++++. ..++..++.+++
T Consensus 185 ---~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 185 ---AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK 254 (276)
T ss_dssp ---TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB
T ss_pred ---CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCC
Confidence 5689999999 9999998742 2222444666654 58999999973 345666655544
No 90
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.09 E-value=8.6e-09 Score=88.23 Aligned_cols=163 Identities=9% Similarity=0.039 Sum_probs=104.4
Q ss_pred CCcEEEcC----CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCC--------eEEEEec-----CccccceeE
Q 047259 2 TNDVIEAS----DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELE--------ETTVLHE-----GFYFANGVA 64 (225)
Q Consensus 2 pndv~~~~----dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--------~~~~~~~-----~~~~pnGi~ 64 (225)
+++|+++| +|.||++.+.. ..++|+++..+.+ +.+.+.. ...+.+.|+
T Consensus 82 llGia~~Pdf~~~g~lYv~yt~~---------------~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~ 146 (347)
T 3das_A 82 LLGIALSPDYASDHMVYAYFTSA---------------SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIA 146 (347)
T ss_dssp EEEEEECTTHHHHCEEEEEEECS---------------SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEE
T ss_pred ceeeEeccccccCCEEEEEEecC---------------CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCcccc
Confidence 46899998 48899986531 1467888875431 2333332 233567799
Q ss_pred EecCCCEEEEEe-------------CCCCEEEEEEecCCC-----CCceeEEeccCCCCCCceEECCCCCEEEEeecCCc
Q 047259 65 LSKDENFVVVCE-------------SWKFRCRRYWLKGPR-----QGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQ 126 (225)
Q Consensus 65 ~~~dg~~Lyv~~-------------~~~~~I~~~~~~~~~-----~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~ 126 (225)
++|||. |||+. ...++|+|+++++.. ....+++..++ ..|.+|++|++|+||+++++...
T Consensus 147 fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~ 224 (347)
T 3das_A 147 FGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDT 224 (347)
T ss_dssp ECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSS
T ss_pred CCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCC
Confidence 999996 99995 246899999988631 11235555322 35999999999999999998531
Q ss_pred hhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC---------------CCcEEEEEECCCCCcccceeEEE
Q 047259 127 TGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT---------------HGKIIMDFNDPNATYISFVTSAV 191 (225)
Q Consensus 127 ~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~---------------~G~~~~~~~~p~g~~~~~~t~~~ 191 (225)
...|-++.+ .+.+...+..+.+ ...+++++
T Consensus 225 ---------------------------------~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~--~~ap~G~~ 269 (347)
T 3das_A 225 ---------------------------------WDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTD--EASPSGIA 269 (347)
T ss_dssp ---------------------------------CEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTT--TCCEEEEE
T ss_pred ---------------------------------CceeeEEcCCCEecCCcccCCCCCccccCCcEecCCC--CCCCcceE
Confidence 111222211 1111111111111 12577888
Q ss_pred EeCCEEEEeeCCCCeEEEEeCCCcc
Q 047259 192 EFEDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 192 ~~~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
+.++.+|++.+...+|.++++++..
T Consensus 270 ~~~g~~~~~~l~~~~l~~v~~~~~~ 294 (347)
T 3das_A 270 YAEGSVWMAGLRGERLWRIPLKGTA 294 (347)
T ss_dssp EETTEEEEEESTTCSEEEEEEETTE
T ss_pred EEcCceeeccccCCEEEEEEecCCc
Confidence 8899999999999999999987653
No 91
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.08 E-value=3.6e-09 Score=91.82 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=87.5
Q ss_pred EcCCC-cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeC--------
Q 047259 7 EASDG-SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCES-------- 77 (225)
Q Consensus 7 ~~~dG-~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~-------- 77 (225)
..|+| ++|++|... + ...+.|+.+|..++++...+.....|. |+++|||++|||+++
T Consensus 40 ~~pd~~~vyV~~~~~-~------------~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G 105 (386)
T 3sjl_D 40 PAPDARRVYVNDPAH-F------------AAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARG 105 (386)
T ss_dssp CCCCTTEEEEEECGG-G------------CSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEE
T ss_pred cCCCCCEEEEEcCcc-c------------CCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccC
Confidence 45677 699999851 1 125799999998888776666566785 999999999999985
Q ss_pred -CCCEEEEEEecCCCCCceeEEecc-----CCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhh
Q 047259 78 -WKFRCRRYWLKGPRQGRLESFIEH-----LPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELIN 150 (225)
Q Consensus 78 -~~~~I~~~~~~~~~~~~~~~~~~~-----~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~ 150 (225)
..+.|..||..+...- .++-... ....|.++++++||+ +||++...
T Consensus 106 ~~~~~VsviD~~t~~v~-~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~-------------------------- 158 (386)
T 3sjl_D 106 ERTDYVEVFDPVTLLPT-ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-------------------------- 158 (386)
T ss_dssp EEEEEEEEECTTTCCEE-EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS--------------------------
T ss_pred CCCCEEEEEECCCCeEE-EEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC--------------------------
Confidence 3567999988653111 1111110 012699999999997 79987541
Q ss_pred hhccCCCCcceEEEEECCC-CcEEEEEECCC
Q 047259 151 LLIPLGNDAGARIVKVDTH-GKIIMDFNDPN 180 (225)
Q Consensus 151 ~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~ 180 (225)
.+.|..+|.. ++++..+..|.
T Consensus 159 ---------~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 159 ---------APAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp ---------SCEEEEEETTTTEEEEEEECCS
T ss_pred ---------CCeEEEEECCCCcEEEEEECCC
Confidence 4578889886 78888887653
No 92
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.06 E-value=3.7e-08 Score=81.51 Aligned_cols=158 Identities=16% Similarity=0.155 Sum_probs=101.4
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEE--EeCCCCeEEEEe--cCccccceeEEecCCCEEEEEe
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLK--YDPELEETTVLH--EGFYFANGVALSKDENFVVVCE 76 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~--~d~~~~~~~~~~--~~~~~pnGi~~~~dg~~Lyv~~ 76 (225)
|+.++++++|+ ||++... .+.|.. ++..+++.+.+. .....|.+++++|||+.||++.
T Consensus 40 ~~~~~~spdg~~l~~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 102 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRP-----------------EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGS 102 (343)
T ss_dssp CCCEEECTTSSEEEEEETT-----------------TTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEE
T ss_pred CceEEECCCCCEEEEeecC-----------------CCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEe
Confidence 56788899887 7777654 245555 443356655432 2234899999999999999999
Q ss_pred CCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 77 SWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 77 ~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
...+.|..|+++.+......... .....|..++++++|+ +|++.....
T Consensus 103 ~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~------------------------------ 151 (343)
T 1ri6_A 103 YNAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISPDNRTLWVPALKQD------------------------------ 151 (343)
T ss_dssp TTTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECTTSSEEEEEEGGGT------------------------------
T ss_pred cCCCeEEEEECCCCccccccccc-cCCCCceEEEECCCCCEEEEecCCCC------------------------------
Confidence 88889999998421111111111 1233588999999997 777764410
Q ss_pred CCCcceEEEEECCCCcEEE----EEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCC
Q 047259 156 GNDAGARIVKVDTHGKIIM----DFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~----~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.-.++.++.+|++.. .+..+.+. .+..++. ++..||+++...+.|.+++++.
T Consensus 152 ----~v~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 152 ----RICLFTVSDDGHLVAQDPAEVTTVEGA---GPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp ----EEEEEEECTTSCEEEEEEEEEECSTTC---CEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred ----EEEEEEecCCCceeeecccccccCCCC---CcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 234445555576643 33433332 3444444 3567999998899999999865
No 93
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.05 E-value=3e-08 Score=84.18 Aligned_cols=152 Identities=15% Similarity=0.139 Sum_probs=110.0
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCC
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKF 80 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~ 80 (225)
++.+++.++|+ ||++... .+.|..+|..+++..........+++++++||++.||++....+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~-----------------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~ 96 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAH-----------------SNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASS 96 (391)
T ss_dssp EEEEEECTTSSEEEEEEGG-----------------GTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT
T ss_pred cceEEECCCCCEEEEECCC-----------------CCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCC
Confidence 35677888885 6676543 57899999887887766665568999999999999999998889
Q ss_pred EEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 81 RCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 81 ~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
.|..+++++. ....... ....+.+++++++|+ +|++...
T Consensus 97 ~v~v~d~~~~---~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~------------------------------------ 136 (391)
T 1l0q_A 97 TLSVIDTTSN---TVAGTVK-TGKSPLGLALSPDGKKLYVTNNG------------------------------------ 136 (391)
T ss_dssp EEEEEETTTT---EEEEEEE-CSSSEEEEEECTTSSEEEEEETT------------------------------------
T ss_pred EEEEEECCCC---eEEEEEe-CCCCcceEEECCCCCEEEEEeCC------------------------------------
Confidence 9999998752 2222221 334578999999997 6677654
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCCc
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.|..+|.. |+.+..+.... .+..+.. ++..||++....+.|.++++.+.
T Consensus 137 ~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 137 DKTVSVINTVTKAVINTVSVGR-----SPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCEEEEEECCCCcEEEEEecCC-----CcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 4577778864 67777776522 2344444 35688899888889999988654
No 94
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.03 E-value=2.5e-08 Score=86.02 Aligned_cols=130 Identities=7% Similarity=-0.069 Sum_probs=86.1
Q ss_pred EEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeC---------CCCEEEEEEecCCCCCceeEE-ec-c----CC
Q 047259 39 QLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCES---------WKFRCRRYWLKGPRQGRLESF-IE-H----LP 103 (225)
Q Consensus 39 ~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~---------~~~~I~~~~~~~~~~~~~~~~-~~-~----~~ 103 (225)
.|+.||..++++.........| +|+++|||++|||+++ ..+.|..|+.++. .....+ .. . ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~--~~~~~i~~~~~~~~~~g 124 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF--LPIADIELPDAPRFDVG 124 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC--cEEEEEECCCccccccC
Confidence 8899999888776555555678 9999999999999985 3578999998642 111111 10 0 01
Q ss_pred CCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEE-EECCCC
Q 047259 104 GGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMD-FNDPNA 181 (225)
Q Consensus 104 g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~-~~~p~g 181 (225)
..|.++++++||+ ||++.... ...|..+|..++++.. +..|.+
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~-----------------------------------~~~v~viD~t~~~~~~~i~~~~~ 169 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAA-----------------------------------GPAVGLVVQGGSSDDQLLSSPTC 169 (373)
T ss_pred CCccceEECCCCCEEEEEecCC-----------------------------------CCeEEEEECCCCEEeEEcCCCce
Confidence 3589999999997 78876541 2467777833777777 655422
Q ss_pred CcccceeEEEEeCCEEEEeeCCCCeEEEEeC
Q 047259 182 TYISFVTSAVEFEDNLYMASIQSKFVGKLPL 212 (225)
Q Consensus 182 ~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~ 212 (225)
..+.+.+++.|++...++.+.+++.
T Consensus 170 ------~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 170 ------YHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred ------EEEEeCCCceEEEEcCCCCEEEEEC
Confidence 1123445566676666666666666
No 95
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.03 E-value=5.4e-09 Score=89.56 Aligned_cols=170 Identities=12% Similarity=0.090 Sum_probs=104.2
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCC-------------eEEEEecCccccceeEEec
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELE-------------ETTVLHEGFYFANGVALSK 67 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-------------~~~~~~~~~~~pnGi~~~~ 67 (225)
++++|++++||.||++...... ....++ .....|+|++++++.. ..++...++..|.||+++|
T Consensus 131 ~~~~l~~~pdG~Lyv~~Gd~~~--~~~~q~--~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~ 206 (353)
T 2g8s_A 131 FGGRLVFDGKGYLFIALGENNQ--RPTAQD--LDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNP 206 (353)
T ss_dssp CCCCEEECSSSEEEEEECCTTC--GGGGGC--TTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEET
T ss_pred cCccEEECCCCcEEEEECCCCC--CCccCC--CCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEEC
Confidence 4789999999999999754111 111111 1244789999998732 2455667889999999999
Q ss_pred CCCEEEEEeCCCC---EEEEEEecCCCCCce---------------------eEEe----ccC-CCCCCceEECC-----
Q 047259 68 DENFVVVCESWKF---RCRRYWLKGPRQGRL---------------------ESFI----EHL-PGGPDNINLAP----- 113 (225)
Q Consensus 68 dg~~Lyv~~~~~~---~I~~~~~~~~~~~~~---------------------~~~~----~~~-~g~Pd~i~~d~----- 113 (225)
+...||+++.+.+ +|.++...++ -+-. ..+. ... ...|.|+++..
T Consensus 207 ~~g~l~~~d~g~~~~dei~~i~~G~n-yGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp 285 (353)
T 2g8s_A 207 WSNALWLNEHGPRGGDEINIPQKGKN-YGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFP 285 (353)
T ss_dssp TTTEEEEEEECSBSCEEEECCCTTCB-CCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSG
T ss_pred CCCCEEEEecCCCCCcEEeEeccCCc-CCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCc
Confidence 5456999998754 5655432111 0000 0000 001 12477888863
Q ss_pred --CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEE
Q 047259 114 --DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSA 190 (225)
Q Consensus 114 --~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~ 190 (225)
+|.+|+++.. .++|.+++.+ |+.+.....-.+ ....+..+
T Consensus 286 ~~~g~l~v~~~~------------------------------------~~~v~~~~~~~~~~~~~~~~~~~-~~~rp~~v 328 (353)
T 2g8s_A 286 QWQQKLFIGALK------------------------------------DKDVIVMSVNGDKVTEDGRILTD-RGQRIRDV 328 (353)
T ss_dssp GGTTEEEEEETT------------------------------------TTEEEEEEEETTEEEEEEEESGG-GCCCEEEE
T ss_pred ccCCcEEEEEcc------------------------------------CCEEEEEEeCCCeEeeeEEcccC-CCCceeEE
Confidence 5889998876 4577777665 444332221011 12346666
Q ss_pred EE-eCCEEEEe-eCCCCeEEEEeC
Q 047259 191 VE-FEDNLYMA-SIQSKFVGKLPL 212 (225)
Q Consensus 191 ~~-~~~~Lyv~-~~~~~~i~~~~~ 212 (225)
+. .+|.|||+ +..+++|+|+..
T Consensus 329 ~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 329 RTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp EECTTSCEEEEECSTTEEEEEEEC
T ss_pred EECCCCcEEEEEeCCCCEEEEEeC
Confidence 65 47899997 557899999864
No 96
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.01 E-value=5.5e-08 Score=79.76 Aligned_cols=157 Identities=10% Similarity=0.075 Sum_probs=103.6
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCC-CCeEE---EEecCc-ccc-----ceeEEecCCCE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPE-LEETT---VLHEGF-YFA-----NGVALSKDENF 71 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~---~~~~~~-~~p-----nGi~~~~dg~~ 71 (225)
+++|++.++|.+|+++.+ .++++.++.. .+.+. ...-.+ ..+ .||+++|++++
T Consensus 72 ~EGIa~~~~g~~~vs~E~-----------------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~ 134 (255)
T 3qqz_A 72 LETIEYIGDNQFVISDER-----------------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHT 134 (255)
T ss_dssp EEEEEECSTTEEEEEETT-----------------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTE
T ss_pred hHHeEEeCCCEEEEEECC-----------------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCE
Confidence 457888888888888665 3455555432 13222 111111 234 89999999988
Q ss_pred EEEEeCCCC-EEEEEEecCC-CCCceeEEec-----c-CCCCCCceEECCC-CCEEEEeecCCchhhhhhhcChhHHHHH
Q 047259 72 VVVCESWKF-RCRRYWLKGP-RQGRLESFIE-----H-LPGGPDNINLAPD-GSFWVALIKMNQTGVRAIQSCPDKWKLL 142 (225)
Q Consensus 72 Lyv~~~~~~-~I~~~~~~~~-~~~~~~~~~~-----~-~~g~Pd~i~~d~~-G~l~v~~~~~~~~~~~~~~~~~~~r~~~ 142 (225)
||++.-... +|+.++ +- .....+++.. . .-.-+.++++|+. |++|+....
T Consensus 135 L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~------------------- 193 (255)
T 3qqz_A 135 FWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHE------------------- 193 (255)
T ss_dssp EEEEEESSSEEEEEEE--STTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETT-------------------
T ss_pred EEEEECcCCceEEEEc--ccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECC-------------------
Confidence 998876654 888887 21 0112333211 0 1124789999985 789998766
Q ss_pred HhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCC-----cccceeEEEEe-CCEEEEeeCCCCeEEEEeCCC
Q 047259 143 QAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNAT-----YISFVTSAVEF-EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 143 ~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~-----~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
...++++|.+|+++..+....|. .++.+-+++.+ +|+|||++= .+.+++|....
T Consensus 194 -----------------s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE-~n~~y~f~~~~ 253 (255)
T 3qqz_A 194 -----------------SRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE-PNRFYRFTPQS 253 (255)
T ss_dssp -----------------TTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET-TTEEEEEEC--
T ss_pred -----------------CCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC-CceEEEEEecC
Confidence 45899999999999999876542 25566777764 789999964 47999997654
No 97
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.00 E-value=4.4e-08 Score=81.40 Aligned_cols=101 Identities=19% Similarity=0.140 Sum_probs=72.6
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC-------ccccceeEEecCCCEEE
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG-------FYFANGVALSKDENFVV 73 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-------~~~pnGi~~~~dg~~Ly 73 (225)
|+.+++.+||+ +|++... .+.|+.+|..+++....... ...|++++++|||+.||
T Consensus 45 ~~~~~~s~dg~~~~v~~~~-----------------~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 107 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNH-----------------YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVY 107 (349)
T ss_dssp SCEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEE
T ss_pred CceeEECCCCCEEEEEeCC-----------------CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEE
Confidence 57788899886 7888654 57899999887776544332 33489999999999999
Q ss_pred EEeCC-----------CCEEEEEEecCCCCCc-eeEEeccCCCCCCceEECCCCCEEEEe
Q 047259 74 VCESW-----------KFRCRRYWLKGPRQGR-LESFIEHLPGGPDNINLAPDGSFWVAL 121 (225)
Q Consensus 74 v~~~~-----------~~~I~~~~~~~~~~~~-~~~~~~~~~g~Pd~i~~d~~G~l~v~~ 121 (225)
++... .+.|+.+++++..... ...+. .+..+.+++++++|++|++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~l~~~~ 165 (349)
T 1jmx_B 108 ATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDGSLYVAG 165 (349)
T ss_dssp EEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTSCEEEES
T ss_pred EEcccccccccccccCCCeEEEEECCCccccceeeecc--CCCcccceeECCCCcEEEcc
Confidence 99855 5799999987522111 12221 33457888899999988853
No 98
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.99 E-value=2.3e-08 Score=85.10 Aligned_cols=139 Identities=10% Similarity=0.098 Sum_probs=87.3
Q ss_pred CcEEEEEeCCCCeEEEEe-----cCccccceeEEecCCCEEEEEeCCCCEEEEEEec-CCCCCceeEEe--cc-C-CCCC
Q 047259 37 HGQLLKYDPELEETTVLH-----EGFYFANGVALSKDENFVVVCESWKFRCRRYWLK-GPRQGRLESFI--EH-L-PGGP 106 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~-----~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~-~~~~~~~~~~~--~~-~-~g~P 106 (225)
...+|.++.+ +++.... +....|++++++|||++||+++.+.++|+.|+++ ++ ...... .. . ...|
T Consensus 120 ~v~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g---~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 120 YGNVFSVSET-GKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG---EVELVGSVDAPDPGDHP 195 (365)
T ss_dssp EEEEEEECTT-CCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS---CEEEEEEEECSSTTCCE
T ss_pred eEEEEccCCC-CcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCC---CEEEeeeEecCCCCCCC
Confidence 3455666543 5544322 2456899999999999999999988999999986 32 222111 11 1 3468
Q ss_pred CceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEE---EEE-CCC
Q 047259 107 DNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIM---DFN-DPN 180 (225)
Q Consensus 107 d~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~---~~~-~p~ 180 (225)
.+++++++|+ +|++..... .-.|+.+++ +|++.. .+. .|.
T Consensus 196 ~~~~~spdg~~l~v~~~~~~----------------------------------~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGN----------------------------------RICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EEEEECTTSSEEEEEETTTT----------------------------------EEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred CEeEECCCCCEEEEEECCCC----------------------------------eEEEEEEeCCCCcEEEccceEEcCCC
Confidence 9999999996 677654311 345666776 477532 333 333
Q ss_pred CCc-cc-------ceeEEE-E--eCCEEEEeeCCCC-----eEEEEeCC
Q 047259 181 ATY-IS-------FVTSAV-E--FEDNLYMASIQSK-----FVGKLPLN 213 (225)
Q Consensus 181 g~~-~~-------~~t~~~-~--~~~~Lyv~~~~~~-----~i~~~~~~ 213 (225)
+.. .. .+..++ . ++..||+++...+ .|.+++++
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 210 01 245555 4 3568999987766 88888875
No 99
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.98 E-value=1.1e-07 Score=80.71 Aligned_cols=153 Identities=15% Similarity=0.104 Sum_probs=109.8
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCC
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKF 80 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~ 80 (225)
++++++.++|+ ||++... .+.|+.+|..+++..........|.+++++||++.||++....+
T Consensus 118 ~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 118 PLGLALSPDGKKLYVTNNG-----------------DKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp EEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT
T ss_pred cceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCC
Confidence 35677778775 6677554 67899999887877766666678899999999999999999999
Q ss_pred EEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 81 RCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 81 ~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
.|+.+++.+. ....... ....+.+++++++|+ +|++.....
T Consensus 181 ~v~~~d~~~~---~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~---------------------------------- 222 (391)
T 1l0q_A 181 SISVIDTVTN---SVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKY---------------------------------- 222 (391)
T ss_dssp EEEEEETTTT---EEEEEEE-CSSEEEEEEECTTSSEEEEEEECSS----------------------------------
T ss_pred EEEEEECCCC---eEEEEEe-cCCCccceEECCCCCEEEEEecCcC----------------------------------
Confidence 9999998652 2211221 334578999999997 566654210
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+.|..+|.. ++.+..+.... .+..+.. ++..||++....+.|.++++..
T Consensus 223 ~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 223 FNTVSMIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp CCEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEECCCCeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 4678888865 67777776532 2344444 3568999988889999998875
No 100
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.94 E-value=1.2e-08 Score=89.75 Aligned_cols=80 Identities=15% Similarity=0.042 Sum_probs=58.7
Q ss_pred CCCcEEEcCCC-cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--c------CccccceeEEecCCCE
Q 047259 1 FTNDVIEASDG-SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--E------GFYFANGVALSKDENF 71 (225)
Q Consensus 1 ~pndv~~~~dG-~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~------~~~~pnGi~~~~dg~~ 71 (225)
.| ++++++|| .+|++++... + ...+...+.|..+|..++++...+ . ....|.+++++|||++
T Consensus 120 ~P-gia~SpDgk~lyVan~~~~--~------~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~ 190 (426)
T 3c75_H 120 LP-HPVAAEDGSFFAQASTVFE--R------IARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKN 190 (426)
T ss_dssp SC-EEEECTTSSCEEEEEEEEE--E------TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSE
T ss_pred CC-ceEECCCCCEEEEEecccc--c------cccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence 37 89999999 5999986410 0 001123568999999877765432 2 1357999999999999
Q ss_pred EEEEeCC-CCEEEEEEecC
Q 047259 72 VVVCESW-KFRCRRYWLKG 89 (225)
Q Consensus 72 Lyv~~~~-~~~I~~~~~~~ 89 (225)
|||++.. .+.|..+|...
T Consensus 191 lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 191 LLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp EEEEECSSSCEEEEEETTT
T ss_pred EEEEecCCCCeEEEEECCC
Confidence 9999875 78999999865
No 101
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.93 E-value=3.7e-08 Score=83.17 Aligned_cols=104 Identities=16% Similarity=0.179 Sum_probs=72.3
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe------cCccccceeEEecCCCEEEE
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH------EGFYFANGVALSKDENFVVV 74 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~------~~~~~pnGi~~~~dg~~Lyv 74 (225)
|+.+++++||+ +|+++.. .+.|..|+.++++++.+. .+...|.+|+|+|||++||+
T Consensus 213 ~~~~~~spdg~~l~v~~~~-----------------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v 275 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEI-----------------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYA 275 (361)
T ss_dssp EEEEEECTTSSEEEEEETT-----------------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEE
T ss_pred CeEEEEcCCCCEEEEEcCC-----------------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEE
Confidence 56789999996 8888754 456766666556654432 22345789999999999999
Q ss_pred EeCC-CCEEEEEEecCCCCCceeEEec-cCCCCCCceEECCCCC-EEEEeec
Q 047259 75 CESW-KFRCRRYWLKGPRQGRLESFIE-HLPGGPDNINLAPDGS-FWVALIK 123 (225)
Q Consensus 75 ~~~~-~~~I~~~~~~~~~~~~~~~~~~-~~~g~Pd~i~~d~~G~-l~v~~~~ 123 (225)
+... .+.|..|+++.. .+..+.... .....|.+++++++|+ ||++...
T Consensus 276 ~~~~~~~~i~v~~~~~~-~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 276 SNRLKADGVAIFKVDET-NGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EECSSSCEEEEEEECTT-TCCEEEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred ECCCCCCEEEEEEEcCC-CCcEEEeeEecCCCCCceEEECCCCCEEEEEECC
Confidence 9998 889999888521 122222211 1234799999999998 6776644
No 102
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.92 E-value=4.4e-08 Score=89.13 Aligned_cols=84 Identities=13% Similarity=0.007 Sum_probs=62.2
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEecc-CCCCCCceEEC---
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEH-LPGGPDNINLA--- 112 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~-~~g~Pd~i~~d--- 112 (225)
.+.|..+|..++++...+.....|.+++++|||++||++.. .+.|..|++... ..++.... ....|.+++++
T Consensus 176 ~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~---t~~~v~~i~~G~~P~~ia~s~~~ 251 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR-DGKVNMIDLWMK---EPTTVAEIKIGSEARSIETSKME 251 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSS---SCCEEEEEECCSEEEEEEECCST
T ss_pred CCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC-CCeEEEEECCCC---CCcEeEEEecCCCCceeEEcccc
Confidence 78999999988877665555667899999999999999974 679999998411 11111111 33469999999
Q ss_pred -CCCC-EEEEeecC
Q 047259 113 -PDGS-FWVALIKM 124 (225)
Q Consensus 113 -~~G~-l~v~~~~~ 124 (225)
+||+ +||++...
T Consensus 252 ~pDGk~l~v~n~~~ 265 (567)
T 1qks_A 252 GWEDKYAIAGAYWP 265 (567)
T ss_dssp TCTTTEEEEEEEET
T ss_pred CCCCCEEEEEEccC
Confidence 5986 78887663
No 103
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.92 E-value=8.9e-08 Score=86.49 Aligned_cols=150 Identities=9% Similarity=0.018 Sum_probs=105.3
Q ss_pred EcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEE
Q 047259 7 EASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYW 86 (225)
Q Consensus 7 ~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~ 86 (225)
++++|.+|+++.. .+.|..+|..++++.........+.+++++|||++||++... +.|..|+
T Consensus 145 ~~p~~~~~vs~~~-----------------d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D 206 (543)
T 1nir_A 145 LDLPNLFSVTLRD-----------------AGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMID 206 (543)
T ss_dssp CCGGGEEEEEEGG-----------------GTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEE
T ss_pred cCCCCEEEEEEcC-----------------CCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEE
Confidence 5677888888665 678999999888776555433338999999999999999987 9999999
Q ss_pred e--cCCCCCceeEEeccCCCCCCceEECC----CCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 87 L--KGPRQGRLESFIEHLPGGPDNINLAP----DGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 87 ~--~~~~~~~~~~~~~~~~g~Pd~i~~d~----~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
+ .+. .....+ . ....|.++++++ +|+ +|++...
T Consensus 207 ~~~~t~--~~~~~i-~-~g~~p~~va~sp~~~~dg~~l~v~~~~------------------------------------ 246 (543)
T 1nir_A 207 LWAKEP--TKVAEI-K-IGIEARSVESSKFKGYEDRYTIAGAYW------------------------------------ 246 (543)
T ss_dssp TTSSSC--EEEEEE-E-CCSEEEEEEECCSTTCTTTEEEEEEEE------------------------------------
T ss_pred CcCCCC--cEEEEE-e-cCCCcceEEeCCCcCCCCCEEEEEEcc------------------------------------
Confidence 8 331 111111 1 334689999999 987 6777755
Q ss_pred ceEEEEECCC-CcEEEEEECCC----CCc---ccceeEEEE--eCCEEEEeeCCCCeEEEEeCCC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPN----ATY---ISFVTSAVE--FEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~----g~~---~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+.|..+|.+ ++++..+..+. +.. -+.+..++. .++.+|++....+.|..++...
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 3467777764 78887776421 000 012344444 3688999999999999998865
No 104
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.91 E-value=2.3e-07 Score=79.96 Aligned_cols=78 Identities=13% Similarity=0.023 Sum_probs=55.1
Q ss_pred cEEEcCCC-cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec-C-------ccccceeEEecCCCEEEE
Q 047259 4 DVIEASDG-SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE-G-------FYFANGVALSKDENFVVV 74 (225)
Q Consensus 4 dv~~~~dG-~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~-------~~~pnGi~~~~dg~~Lyv 74 (225)
++++++|| .+|+++.... . ...+...+.|..+|..+.++..... + ...|.+++++|||++|||
T Consensus 70 ~i~~spDg~~lyv~n~~~~--~------~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v 141 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFS--R------IAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLF 141 (373)
T ss_pred CeEECCCCCEEEEEecccc--c------cccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEE
Confidence 89999999 4999986411 0 0011235678899987655433221 1 257999999999999999
Q ss_pred EeCC-CCEEEEEEecCC
Q 047259 75 CESW-KFRCRRYWLKGP 90 (225)
Q Consensus 75 ~~~~-~~~I~~~~~~~~ 90 (225)
+... .+.|..++ ++.
T Consensus 142 ~n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 142 FQFAAGPAVGLVV-QGG 157 (373)
T ss_pred EecCCCCeEEEEE-CCC
Confidence 9875 68999999 753
No 105
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.89 E-value=3.3e-08 Score=85.29 Aligned_cols=146 Identities=5% Similarity=-0.179 Sum_probs=100.5
Q ss_pred CcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeC---------CCCE
Q 047259 11 GSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCES---------WKFR 81 (225)
Q Consensus 11 G~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~---------~~~~ 81 (225)
.++|+++.... ....+|..+|.+++++.....-...| |++++||+++|||+++ ..+.
T Consensus 32 ~~~yV~~~~~~-------------~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~ 97 (368)
T 1mda_H 32 RRSHITLPAYF-------------AGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDY 97 (368)
T ss_dssp TEEEEEECTTT-------------CSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEE
T ss_pred CeEEEECCccC-------------CccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCE
Confidence 57999988621 01228999999888877666555678 9999999999999984 4689
Q ss_pred EEEEEecCCCCCceeEEeccC-----CCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 82 CRRYWLKGPRQGRLESFIEHL-----PGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 82 I~~~~~~~~~~~~~~~~~~~~-----~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
|..||+.+...- .++-.... ...|.++++++||+ +||++...
T Consensus 98 VsviD~~T~~vv-~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~------------------------------- 145 (368)
T 1mda_H 98 VEVFDPVTFLPI-ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS------------------------------- 145 (368)
T ss_dssp EEEECTTTCCEE-EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS-------------------------------
T ss_pred EEEEECCCCCEE-EEEECCCccccccCCCcceEEEcCCCCEEEEEccCC-------------------------------
Confidence 999998753111 11111100 13699999999995 89987652
Q ss_pred CCCcceEEEE--ECCCCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 047259 156 GNDAGARIVK--VDTHGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 156 ~~~~~~~V~~--~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
...|.. +|+.. +..+..+.+ + .+.+.++++|++...++++.++++.+
T Consensus 146 ----~~~v~V~~iD~~t--v~~i~v~~~--~----~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 146 ----SAAAGLSVPGASD--DQLTKSASC--F----HIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp ----SCEEEEEETTTEE--EEEEECSSC--C----CCEEEETTEEECCCCTTSCEEEECCS
T ss_pred ----CCeEEEEEEchhh--ceEEECCCc--e----EEccCCCeEEEEEcCCCCEEEEECcc
Confidence 235666 77755 456665432 1 12456677888888888888888876
No 106
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.85 E-value=3.8e-07 Score=82.35 Aligned_cols=158 Identities=9% Similarity=-0.071 Sum_probs=106.6
Q ss_pred CCcEEEcC----CCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC------------ccccceeE
Q 047259 2 TNDVIEAS----DGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG------------FYFANGVA 64 (225)
Q Consensus 2 pndv~~~~----dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~------------~~~pnGi~ 64 (225)
|..+++++ ||+ +|+++.. .+.|..+|..++++...... ...+.+|+
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~-----------------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYW-----------------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEE-----------------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred cceEEeCCCcCCCCCEEEEEEcc-----------------CCeEEEEeccccccceeecccCcccCccccccCCceEEEE
Confidence 56788998 885 7777543 46788888877765544322 12567899
Q ss_pred EecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHH
Q 047259 65 LSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQ 143 (225)
Q Consensus 65 ~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~ 143 (225)
++++++.+|++....++|+.++......-.... +. ....|.+++++++|+ +|++...
T Consensus 287 ~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~-i~-~~~~~~~~~~spdg~~l~va~~~-------------------- 344 (543)
T 1nir_A 287 ASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS-IG-AAPFLHDGGWDSSHRYFMTAANN-------------------- 344 (543)
T ss_dssp ECSSSSEEEEEETTTTEEEEEECTTSSSCEEEE-EE-CCSSCCCEEECTTSCEEEEEEGG--------------------
T ss_pred ECCCCCEEEEEECCCCeEEEEEecCCCcceeEE-ec-cCcCccCceECCCCCEEEEEecC--------------------
Confidence 999999999999999999999987531111111 22 345799999999998 5666655
Q ss_pred hhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCC-CcccceeEEEEeCCEEEEeeC-CCCeEEEEeCCC
Q 047259 144 AYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNA-TYISFVTSAVEFEDNLYMASI-QSKFVGKLPLNT 214 (225)
Q Consensus 144 ~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g-~~~~~~t~~~~~~~~Lyv~~~-~~~~i~~~~~~~ 214 (225)
...|..+|.+ |+++..+..... ......+...+.++.+|++.. ..+.|.+++.++
T Consensus 345 ----------------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 345 ----------------SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp ----------------GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ----------------CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 3467778875 888887764111 000122211223589999875 678999999876
No 107
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.85 E-value=1.5e-07 Score=78.19 Aligned_cols=99 Identities=8% Similarity=-0.061 Sum_probs=73.2
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCcc--ccceeEEecCCCEEEEEeCCCCE
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFY--FANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~--~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
++++.+++++|++... .+.|+.+|..+++......... .|.+++++|||+.+|++....+.
T Consensus 4 g~~~~~~~~~~v~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~ 66 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNY-----------------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 66 (349)
T ss_dssp CCCCCTTCEEEEEEET-----------------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCC-----------------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCc
Confidence 5677888899999876 6799999998787665544333 69999999999999999988999
Q ss_pred EEEEEecCCCCCceeEEecc--C----CCCCCceEECCCCC-EEEEee
Q 047259 82 CRRYWLKGPRQGRLESFIEH--L----PGGPDNINLAPDGS-FWVALI 122 (225)
Q Consensus 82 I~~~~~~~~~~~~~~~~~~~--~----~g~Pd~i~~d~~G~-l~v~~~ 122 (225)
|+.+++++. ........ . ...|.+++++++|+ +|++..
T Consensus 67 i~~~d~~t~---~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 67 IYGIDLDTC---KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp EEEEETTTT---EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEE
T ss_pred EEEEeCCCC---cEEEEEEcccccccccccccceEECCCCCEEEEEcc
Confidence 999998642 22111111 1 12388999999997 566653
No 108
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.84 E-value=1.4e-07 Score=77.86 Aligned_cols=98 Identities=26% Similarity=0.151 Sum_probs=72.2
Q ss_pred CCcEEEcCCC-cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCcc------ccceeEEecCCCEEEE
Q 047259 2 TNDVIEASDG-SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFY------FANGVALSKDENFVVV 74 (225)
Q Consensus 2 pndv~~~~dG-~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~------~pnGi~~~~dg~~Lyv 74 (225)
|++++++++| .+|++... .+.|+.+|..+++......... .|.+++++|||+.||+
T Consensus 36 ~~~~~~s~dg~~l~v~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 98 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNK-----------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAI 98 (337)
T ss_dssp CCCEEECTTSSEEEEEETT-----------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEE
T ss_pred ccceEEcCCCCEEEEEeCC-----------------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEE
Confidence 6789999999 48888764 5789999987777654333222 7899999999999999
Q ss_pred EeC-----------CCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC-EEEE
Q 047259 75 CES-----------WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS-FWVA 120 (225)
Q Consensus 75 ~~~-----------~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~ 120 (225)
+.. ..+.|+.+++++. ....... .+..|.+++++++|+ ||++
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~v~d~~~~---~~~~~~~-~~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 99 YESPVRLELTHFEVQPTRVALYDAETL---SRRKAFE-APRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp EEEEEEECSSCEEECCCEEEEEETTTT---EEEEEEE-CCSSCCCEEECTTSSCEEEE
T ss_pred EecccccccccccccCceEEEEECCCC---cEEEEEe-CCCCcceeEECCCCCEEEEe
Confidence 963 3589999998642 2211221 345689999999997 7777
No 109
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.83 E-value=5.6e-07 Score=73.75 Aligned_cols=162 Identities=12% Similarity=0.108 Sum_probs=106.0
Q ss_pred CcEEEcCCC-cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cCccccceeEEecCCCEEEEEeCCC
Q 047259 3 NDVIEASDG-SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 3 ndv~~~~dG-~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
.+++.++++ +||+.... .+.|+++|.. +++.... .+..-+.||++.++++ +||++...
T Consensus 30 SGla~~~~~~~L~aV~d~-----------------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~ 90 (255)
T 3qqz_A 30 SSLTWSAQSNTLFSTINK-----------------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISDERD 90 (255)
T ss_dssp EEEEEETTTTEEEEEEET-----------------TEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEETTT
T ss_pred ceeEEeCCCCEEEEEECC-----------------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEECCC
Confidence 468888864 68876554 5799999997 6655443 5667899999999875 88888888
Q ss_pred CEEEEEEecCCCC-CceeEEeccCCCC-----CCceEECCCC-CEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhh
Q 047259 80 FRCRRYWLKGPRQ-GRLESFIEHLPGG-----PDNINLAPDG-SFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLL 152 (225)
Q Consensus 80 ~~I~~~~~~~~~~-~~~~~~~~~~~g~-----Pd~i~~d~~G-~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~ 152 (225)
++|+.|+++.... .......-..... ..||++|+++ +||++.-..
T Consensus 91 ~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~---------------------------- 142 (255)
T 3qqz_A 91 YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN---------------------------- 142 (255)
T ss_dssp TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS----------------------------
T ss_pred CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC----------------------------
Confidence 9999999874311 1111111001112 3899999987 799976541
Q ss_pred ccCCCCcceEEEEEC--CCCcEEEEEECCC---CCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 153 IPLGNDAGARIVKVD--THGKIIMDFNDPN---ATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 153 ~~~~~~~~~~V~~~d--~~G~~~~~~~~p~---g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
...|++++ +.++.+..+.++. ...+..+++++.+ .++||+-+..+..|..+++.+....
T Consensus 143 -------p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~ 208 (255)
T 3qqz_A 143 -------PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG 208 (255)
T ss_dssp -------SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEE
T ss_pred -------CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEE
Confidence 34677776 2222233332210 1113345666654 5899999999999999998887443
No 110
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.78 E-value=9.2e-07 Score=75.94 Aligned_cols=172 Identities=17% Similarity=0.136 Sum_probs=110.9
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCC
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKF 80 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~ 80 (225)
+.+++++++|+ ||++...... .....|.|+.+|..+++..........+.+++++|+++.||++....+
T Consensus 256 ~~~~~~~~~g~~l~~~~~~~~~----------~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 256 PRGLLLSKDGKELYIAQFSASN----------QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp EEEEEECTTSSEEEEEEEESCT----------TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTT
T ss_pred ceEEEEcCCCCEEEEEECCCCc----------cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCC
Confidence 34677777774 5554432100 001367999999877776655544567899999999999999999999
Q ss_pred EEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCc
Q 047259 81 RCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDA 159 (225)
Q Consensus 81 ~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 159 (225)
+|..+++++. ....... ....|..++++++|+ +|++......... ..+.....
T Consensus 326 ~v~v~d~~~~---~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~--------------------~~~~~g~~-- 379 (433)
T 3bws_A 326 KIEVYDLKEK---KVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTE--------------------GYLKKGLV-- 379 (433)
T ss_dssp EEEEEETTTT---EEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTT--------------------CTTSCCSS--
T ss_pred EEEEEECCCC---cEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCcccc--------------------cccccccc--
Confidence 9999998742 2211122 334578999999997 6776654211000 00000111
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+.|..+|.. |+.+..+.. +. .++.+.. ++..||+++...+.|.++++++
T Consensus 380 dg~v~~~d~~~~~~~~~~~~--~~---~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 380 LGKVYVIDTTTDTVKEFWEA--GN---QPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CCEEEEEETTTTEEEEEEEC--SS---SEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ceEEEEEECCCCcEEEEecC--CC---CCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 4688889874 787777765 22 3455554 3567888888789999988764
No 111
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.77 E-value=2.4e-07 Score=81.54 Aligned_cols=166 Identities=17% Similarity=0.105 Sum_probs=105.9
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCc----cccceeEEecCCCEEEEEeC
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGF----YFANGVALSKDENFVVVCES 77 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~----~~pnGi~~~~dg~~Lyv~~~ 77 (225)
|+.+.+.++| ||++.++.. .+...|.|+.+|.++.++....... .++..+.++|+++.+|++++
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~-----------~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~w 207 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNE-----------EGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEW 207 (462)
T ss_dssp EEEEEECSSC-EEEEEEEET-----------TSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBC
T ss_pred ccceeECCCe-EEEEcCCCc-----------CCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccC
Confidence 6778899999 999988732 2455789999999878776655422 34566788999998899884
Q ss_pred C------------------CCEEEEEEecCCCCCceeEEecc-CCCCCCceEE--CCCCC-EEEEeecCCchhhhhhhcC
Q 047259 78 W------------------KFRCRRYWLKGPRQGRLESFIEH-LPGGPDNINL--APDGS-FWVALIKMNQTGVRAIQSC 135 (225)
Q Consensus 78 ~------------------~~~I~~~~~~~~~~~~~~~~~~~-~~g~Pd~i~~--d~~G~-l~v~~~~~~~~~~~~~~~~ 135 (225)
+ .++|..|++++. .....+.-. ....|.+|.+ +++|+ .||+.--.-.
T Consensus 208 g~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~--k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~--------- 276 (462)
T 2ece_A 208 AVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR--KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK--------- 276 (462)
T ss_dssp CCHHHHTTCCCTTTHHHHSCCEEEEEETTTT--EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT---------
T ss_pred cCccccccccchhhhhhccCCEEEEEECCCC--cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc---------
Confidence 3 789999998752 111111101 1136888877 99986 6887751000
Q ss_pred hhHHHHHHhhhhhhhhhccCCCCcceEEE--EECCCCcE--EEEEECCCCCc--------------ccceeEEEE--eCC
Q 047259 136 PDKWKLLQAYPELINLLIPLGNDAGARIV--KVDTHGKI--IMDFNDPNATY--------------ISFVTSAVE--FED 195 (225)
Q Consensus 136 ~~~r~~~~~~p~~~~~~~~~~~~~~~~V~--~~d~~G~~--~~~~~~p~g~~--------------~~~~t~~~~--~~~ 195 (225)
+-.+.|+ .++. |+. ..++..+..++ -..++.+.. +++
T Consensus 277 ----------------------~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr 333 (462)
T 2ece_A 277 ----------------------DLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDK 333 (462)
T ss_dssp ----------------------TCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSC
T ss_pred ----------------------CCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCC
Confidence 0033443 3443 533 22332222110 123455543 578
Q ss_pred EEEEeeCCCCeEEEEeCC
Q 047259 196 NLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 196 ~Lyv~~~~~~~i~~~~~~ 213 (225)
+|||++++.+.|.+|++.
T Consensus 334 fLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 334 FLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEEEEETTTTEEEEEECS
T ss_pred EEEEEeCCCCEEEEEEec
Confidence 999999999999999986
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.77 E-value=7.5e-07 Score=76.52 Aligned_cols=157 Identities=12% Similarity=0.088 Sum_probs=106.3
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEE
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRC 82 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I 82 (225)
++++.++|++|++... .+.|..||.++++..... .....+++++++|+++.||++....+.|
T Consensus 174 ~~~~~~~~~~~~s~~~-----------------d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 236 (433)
T 3bws_A 174 TISIPEHNELWVSQMQ-----------------ANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDI 236 (433)
T ss_dssp EEEEGGGTEEEEEEGG-----------------GTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEcCCCEEEEEECC-----------------CCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcE
Confidence 4566666666666553 678999998766654433 4466899999999999999999888999
Q ss_pred EEEEecCCCCCceeEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcce
Q 047259 83 RRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGA 161 (225)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~ 161 (225)
..++++.. ....... ..+.|.+++++++|+ +|++...... . ... .+
T Consensus 237 ~~~d~~~~---~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~-~--------------------------~~~--dg 283 (433)
T 3bws_A 237 SVIDRKTK---LEIRKTD-KIGLPRGLLLSKDGKELYIAQFSASN-Q--------------------------ESG--GG 283 (433)
T ss_dssp EEEETTTT---EEEEECC-CCSEEEEEEECTTSSEEEEEEEESCT-T--------------------------CSC--CE
T ss_pred EEEECCCC---cEEEEec-CCCCceEEEEcCCCCEEEEEECCCCc-c--------------------------ccC--CC
Confidence 99998642 2211111 234588999999996 6666654210 0 001 57
Q ss_pred EEEEECCC-CcEEEEEECCCCCcccceeEEEE--eCCEEEEeeCCCCeEEEEeCCCc
Q 047259 162 RIVKVDTH-GKIIMDFNDPNATYISFVTSAVE--FEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 162 ~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.|..+|.. |+.+..+..+. .+..++. .++.||++....+.|.++++.+.
T Consensus 284 ~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 284 RLGIYSMDKEKLIDTIGPPG-----NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp EEEEEETTTTEEEEEEEEEE-----CEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred eEEEEECCCCcEEeeccCCC-----CcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 88888875 67666654321 2344443 34589999999999999998753
No 113
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.75 E-value=8.8e-07 Score=76.53 Aligned_cols=146 Identities=12% Similarity=0.063 Sum_probs=96.7
Q ss_pred CCCcEEEc-C-------CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--------------cC--
Q 047259 1 FTNDVIEA-S-------DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--------------EG-- 56 (225)
Q Consensus 1 ~pndv~~~-~-------dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--------------~~-- 56 (225)
|.||++++ . ++-+|+||.. .+.|..||..+++...+. .+
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~-----------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~ 215 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFL-----------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKE 215 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETT-----------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEE
T ss_pred ccceEEEecccCCCCCCccEEEEEcCC-----------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEE
Confidence 45889999 2 4569999987 234555555444322221 11
Q ss_pred ---ccccceeEEecC----CCEEEEEeCCCCEEEEEEec---CCC-CCceeEEeccCCCCCC--ceEEC-CCCCEEEEee
Q 047259 57 ---FYFANGVALSKD----ENFVVVCESWKFRCRRYWLK---GPR-QGRLESFIEHLPGGPD--NINLA-PDGSFWVALI 122 (225)
Q Consensus 57 ---~~~pnGi~~~~d----g~~Lyv~~~~~~~I~~~~~~---~~~-~~~~~~~~~~~~g~Pd--~i~~d-~~G~l~v~~~ 122 (225)
.....||++||+ ++.||+......+++++..+ ... ....+.+.+ .+...+ ++++| .+|+||++..
T Consensus 216 ~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~~~D~~~G~ly~~~~ 294 (381)
T 3q6k_A 216 YEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGN-RGKYNDAIALAYDPKTKVIFFAEA 294 (381)
T ss_dssp EEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEEEECTTTCEEEEEES
T ss_pred eEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeee-cCCCCCcceEEEeCCCCeEEEEec
Confidence 125689999998 89999999999999999853 221 222332221 221234 56786 7899999998
Q ss_pred cCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-c-----EEEEEECCCCCcccceeEEEE-eCC
Q 047259 123 KMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-K-----IIMDFNDPNATYISFVTSAVE-FED 195 (225)
Q Consensus 123 ~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~-----~~~~~~~p~g~~~~~~t~~~~-~~~ 195 (225)
. +..|...++++ . ....++++ . +..++++.. .+|
T Consensus 295 ~------------------------------------~~aI~~w~~~~~~~~~~n~~~l~~d~--~-l~~pd~~~i~~~g 335 (381)
T 3q6k_A 295 N------------------------------------TKQVSCWNTQKMPLRMKNTDVVYTSS--R-FVFGTDISVDSKG 335 (381)
T ss_dssp S------------------------------------SSEEEEEETTSCSBCGGGEEEEEECT--T-CCSEEEEEECTTS
T ss_pred c------------------------------------CCeEEEEeCCCCccccCceEEEEECC--C-ccccCeEEECCCC
Confidence 7 66899999987 2 34455665 3 556777766 478
Q ss_pred EEEEeeCC
Q 047259 196 NLYMASIQ 203 (225)
Q Consensus 196 ~Lyv~~~~ 203 (225)
.|||.+..
T Consensus 336 ~Lwv~sn~ 343 (381)
T 3q6k_A 336 GLWFMSNG 343 (381)
T ss_dssp CEEEEECS
T ss_pred eEEEEECc
Confidence 99998754
No 114
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.74 E-value=8.4e-07 Score=73.39 Aligned_cols=131 Identities=10% Similarity=0.067 Sum_probs=76.8
Q ss_pred cEEEEEeCCCCeEEEE-ecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC
Q 047259 38 GQLLKYDPELEETTVL-HEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS 116 (225)
Q Consensus 38 g~v~~~d~~~~~~~~~-~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~ 116 (225)
+.|+++|. +++.... .........++.+++|+ ||++.. .+.|++++.++. ....+. .....+..+.+|++|+
T Consensus 195 ~~l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~-~~gl~~~~~~g~---~~~~~~-~~~~~~~~~~~~~~g~ 267 (330)
T 3hxj_A 195 DKVYAINP-DGTEKWNFYAGYWTVTRPAISEDGT-IYVTSL-DGHLYAINPDGT---EKWRFK-TGKRIESSPVIGNTDT 267 (330)
T ss_dssp SSEEEECT-TSCEEEEECCSSCCCSCCEECTTSC-EEEEET-TTEEEEECTTSC---EEEEEE-CSSCCCSCCEECTTSC
T ss_pred CEEEEECC-CCcEEEEEccCCcceeceEECCCCe-EEEEcC-CCeEEEECCCCC---EeEEee-CCCCccccceEcCCCe
Confidence 45667773 3433222 22234467788888775 777765 357888865432 111111 1223456677888888
Q ss_pred EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEE-eCC
Q 047259 117 FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVE-FED 195 (225)
Q Consensus 117 l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~-~~~ 195 (225)
||++... +.+.++|++|+.+..+..+... ...++. .++
T Consensus 268 l~v~t~~-------------------------------------ggl~~~d~~g~~~~~~~~~~~~----~~~~~~d~~g 306 (330)
T 3hxj_A 268 IYFGSYD-------------------------------------GHLYAINPDGTEKWNFETGSWI----IATPVIDENG 306 (330)
T ss_dssp EEEECTT-------------------------------------CEEEEECTTSCEEEEEECSSCC----CSCCEECTTC
T ss_pred EEEecCC-------------------------------------CCEEEECCCCcEEEEEEcCCcc----ccceEEcCCC
Confidence 8886533 4789999999988777765332 222334 689
Q ss_pred EEEEeeCCCCeEEEEeCCCccc
Q 047259 196 NLYMASIQSKFVGKLPLNTPEA 217 (225)
Q Consensus 196 ~Lyv~~~~~~~i~~~~~~~~~~ 217 (225)
+||+++.. +.+...+...+..
T Consensus 307 ~l~~gt~~-G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 307 TIYFGTRN-GKFYALFNLEHHH 327 (330)
T ss_dssp CEEEECTT-SCEEEEEC-----
T ss_pred EEEEEcCC-CeEEEEecccccc
Confidence 99998754 6666666655443
No 115
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.72 E-value=1.8e-07 Score=79.93 Aligned_cols=99 Identities=9% Similarity=-0.053 Sum_probs=68.8
Q ss_pred CC-cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeC---------CC
Q 047259 10 DG-SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCES---------WK 79 (225)
Q Consensus 10 dG-~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~---------~~ 79 (225)
++ .+|+++.... ....+.|+.||..++++.........| +|+++|||++||+++. ..
T Consensus 14 ~~~~~yv~~~~~~------------~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~ 80 (361)
T 2oiz_A 14 QENRIYVMDSVFM------------HLTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRS 80 (361)
T ss_dssp GGGEEEEEECCGG------------GGGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEE
T ss_pred CCCEEEEECCCCC------------ccccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCC
Confidence 44 6999987521 112579999998888876666556778 9999999999999984 24
Q ss_pred CEEEEEEecCCCCCceeEEe-c--c--CCCCCCceEECCCCC-EEEEeec
Q 047259 80 FRCRRYWLKGPRQGRLESFI-E--H--LPGGPDNINLAPDGS-FWVALIK 123 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~-~--~--~~g~Pd~i~~d~~G~-l~v~~~~ 123 (225)
+.|..|++.+. .....+. . . ....|.+++++++|+ ||++...
T Consensus 81 ~~v~v~d~~t~--~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~ 128 (361)
T 2oiz_A 81 DVVEVWDADKL--TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS 128 (361)
T ss_dssp EEEEEEETTTC--CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES
T ss_pred CEEEEEECcCC--cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC
Confidence 67999987642 1111111 0 0 123699999999996 7887754
No 116
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.71 E-value=1.3e-06 Score=71.99 Aligned_cols=144 Identities=12% Similarity=-0.026 Sum_probs=90.9
Q ss_pred CcEEEEEeCCCCeEEEEecCcc---ccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCC----CCCce
Q 047259 37 HGQLLKYDPELEETTVLHEGFY---FANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPG----GPDNI 109 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~---~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g----~Pd~i 109 (225)
.+.|..+|..++++........ .|.+++++|||+.||++....+.|+.+++.+.. ....+....++ .|.++
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~ 87 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--TLGRIDLSTPEERVKSLFGA 87 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--EEEEEECCBTTEEEECTTCE
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--eEeeEEcCCcccccccccce
Confidence 6789999988777655444333 599999999999999999988999999986521 11112111111 68999
Q ss_pred EECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccce
Q 047259 110 NLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFV 187 (225)
Q Consensus 110 ~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~ 187 (225)
+++++|+ +|++..+.... +. ......+.|..+|.+ ++.+..+..+.. +
T Consensus 88 ~~s~dg~~l~~~~~~~~~~------------------~~-------~~~~~~~~i~v~d~~~~~~~~~~~~~~~-----~ 137 (337)
T 1pby_B 88 ALSPDGKTLAIYESPVRLE------------------LT-------HFEVQPTRVALYDAETLSRRKAFEAPRQ-----I 137 (337)
T ss_dssp EECTTSSEEEEEEEEEEEC------------------SS-------CEEECCCEEEEEETTTTEEEEEEECCSS-----C
T ss_pred EECCCCCEEEEEecccccc------------------cc-------cccccCceEEEEECCCCcEEEEEeCCCC-----c
Confidence 9999995 77776431000 00 000003678888876 566666664221 2
Q ss_pred eEEEE--eCCEEEEeeCCCCeEEEEeCCCc
Q 047259 188 TSAVE--FEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 188 t~~~~--~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
..+.. ++..||++ ++.|.++++.+.
T Consensus 138 ~~~~~s~dg~~l~~~---~~~i~~~d~~~~ 164 (337)
T 1pby_B 138 TMLAWARDGSKLYGL---GRDLHVMDPEAG 164 (337)
T ss_dssp CCEEECTTSSCEEEE---SSSEEEEETTTT
T ss_pred ceeEECCCCCEEEEe---CCeEEEEECCCC
Confidence 22333 34568887 467888877643
No 117
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.66 E-value=2.1e-06 Score=78.10 Aligned_cols=70 Identities=11% Similarity=0.001 Sum_probs=54.9
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCC--CCeEEEEecCccccceeEEe----cCCCEEEE
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPE--LEETTVLHEGFYFANGVALS----KDENFVVV 74 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~--~~~~~~~~~~~~~pnGi~~~----~dg~~Lyv 74 (225)
|+.+++++||+ +|+++. .+.|..||.. ++++...+.....|.+|+++ |||++|||
T Consensus 199 p~~v~~SpDGr~lyv~~~------------------dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v 260 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGR------------------DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIA 260 (567)
T ss_dssp EEEEEECTTSCEEEEEET------------------TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEE
T ss_pred ccceEECCCCCEEEEEcC------------------CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEE
Confidence 56788999986 677642 4689999984 55554444455679999999 69999999
Q ss_pred EeCCCCEEEEEEecC
Q 047259 75 CESWKFRCRRYWLKG 89 (225)
Q Consensus 75 ~~~~~~~I~~~~~~~ 89 (225)
+....+.|..++..+
T Consensus 261 ~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 261 GAYWPPQYVIMDGET 275 (567)
T ss_dssp EEEETTEEEEEETTT
T ss_pred EEccCCeEEEEECCC
Confidence 999999999988543
No 118
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.66 E-value=2.7e-06 Score=70.28 Aligned_cols=128 Identities=11% Similarity=0.121 Sum_probs=82.4
Q ss_pred CcEEEEEeCCCCeEEEE-ecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCC
Q 047259 37 HGQLLKYDPELEETTVL-HEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG 115 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~-~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G 115 (225)
.+.|+++|.+ ++.... .........++.+++|. ||++. +.|++++.++ ...--..........+++|++|
T Consensus 156 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t---~~l~~~d~~g----~~~~~~~~~~~~~~~~~~~~~g 226 (330)
T 3hxj_A 156 DNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS---DKVYAINPDG----TEKWNFYAGYWTVTRPAISEDG 226 (330)
T ss_dssp TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES---SSEEEECTTS----CEEEEECCSSCCCSCCEECTTS
T ss_pred CCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe---CEEEEECCCC----cEEEEEccCCcceeceEECCCC
Confidence 4678888887 554322 22234556788888876 88887 7899998433 1111111122346788999999
Q ss_pred CEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCC
Q 047259 116 SFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFED 195 (225)
Q Consensus 116 ~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~ 195 (225)
+||++... +.+.+++++|+....+..+.+. .. +.+...++
T Consensus 227 ~l~v~t~~-------------------------------------~gl~~~~~~g~~~~~~~~~~~~-~~--~~~~~~~g 266 (330)
T 3hxj_A 227 TIYVTSLD-------------------------------------GHLYAINPDGTEKWRFKTGKRI-ES--SPVIGNTD 266 (330)
T ss_dssp CEEEEETT-------------------------------------TEEEEECTTSCEEEEEECSSCC-CS--CCEECTTS
T ss_pred eEEEEcCC-------------------------------------CeEEEECCCCCEeEEeeCCCCc-cc--cceEcCCC
Confidence 99998643 3678889999888777654331 21 12233479
Q ss_pred EEEEeeCCCCeEEEEeCCC
Q 047259 196 NLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 196 ~Lyv~~~~~~~i~~~~~~~ 214 (225)
.||+++.. +.|.+++.++
T Consensus 267 ~l~v~t~~-ggl~~~d~~g 284 (330)
T 3hxj_A 267 TIYFGSYD-GHLYAINPDG 284 (330)
T ss_dssp CEEEECTT-CEEEEECTTS
T ss_pred eEEEecCC-CCEEEECCCC
Confidence 99999753 5788887543
No 119
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.62 E-value=4e-07 Score=78.94 Aligned_cols=79 Identities=16% Similarity=0.080 Sum_probs=57.3
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cC------ccccceeEEecCCCEE
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EG------FYFANGVALSKDENFV 72 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~------~~~pnGi~~~~dg~~L 72 (225)
|+ ++++|||+ +|++++....+ ..+...+.|..||..++++...+ .. ...|.+++++|||++|
T Consensus 81 P~-va~spDG~~lyVan~~~~r~--------~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~l 151 (386)
T 3sjl_D 81 PN-PVVADDGSFIAHASTVFSRI--------ARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTL 151 (386)
T ss_dssp CE-EEECTTSSCEEEEEEEEEET--------TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEE
T ss_pred Cc-EEECCCCCEEEEEccccccc--------ccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEE
Confidence 65 99999995 99998631000 00112567999999877754432 21 3479999999999999
Q ss_pred EEEeCC-CCEEEEEEecC
Q 047259 73 VVCESW-KFRCRRYWLKG 89 (225)
Q Consensus 73 yv~~~~-~~~I~~~~~~~ 89 (225)
||++.. .+.|..+|.+.
T Consensus 152 yVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 152 LFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp EEEECSSSCEEEEEETTT
T ss_pred EEEEcCCCCeEEEEECCC
Confidence 999874 78999999875
No 120
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.60 E-value=1.1e-06 Score=73.73 Aligned_cols=130 Identities=12% Similarity=0.085 Sum_probs=89.6
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCC-CEEEEEEecCCCCCceeEEeccCCCCCCceEECCCC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWK-FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG 115 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~-~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G 115 (225)
...|++++.+.+..+.+..+ +..+.++|++++||+++... .+|++.+++|. ..+++.+. .. ..++++|
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~---~~~~Lt~~--~~---~~~~~~g 234 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYDC---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNP---NPVVLTEA--NI---EHYNVYG 234 (302)
T ss_dssp TCCEEEEETTTTEEEEEECS---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSC---CCEECSCS--CE---EEEEEET
T ss_pred CceEEEEECCCCCEEEEeCC---CccceeeecCCEEEEEEcCCCcEEEEEECCCC---CeEEEeCC--Cc---ceEEECC
Confidence 46889999876666666543 22345779999999998764 59999999873 34444421 12 2355555
Q ss_pred -CEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeC
Q 047259 116 -SFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFE 194 (225)
Q Consensus 116 -~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~ 194 (225)
.||.+.... ...+.+++.||.....+.. +. ...+...+
T Consensus 235 ~~Iy~~~~~~-----------------------------------~~~i~~~~~DG~~r~~l~~--~~----~~~i~i~~ 273 (302)
T 3s25_A 235 SLIFYQRGGD-----------------------------------NPALCVVKNDGTGFKELAK--GE----FCNINVTS 273 (302)
T ss_dssp TEEEEEECSS-----------------------------------SCEEEEEETTSCCCEEEEE--SC----EEEEEECS
T ss_pred CEEEEEECCC-----------------------------------CcEEEEEECCCCccEEeeC--Cc----cceEEEeC
Confidence 476654331 4588999999977666654 22 22456789
Q ss_pred CEEEEeeCCCCeEEEEeCCCcccc
Q 047259 195 DNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 195 ~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
++||++++..+.|.++++++....
T Consensus 274 d~Iy~td~~~~~i~~~~~dGs~~~ 297 (302)
T 3s25_A 274 QYVYFTDFVSNKEYCTSTQNPDTI 297 (302)
T ss_dssp SEEEEEETTTCCEEEEESSSCCSC
T ss_pred CEEEEEECCCCeEEEEECCCCCce
Confidence 999999999999999999887643
No 121
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.59 E-value=1.2e-07 Score=85.43 Aligned_cols=72 Identities=21% Similarity=0.194 Sum_probs=56.7
Q ss_pred CCCcEEEcCCCcEEE-EcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeC
Q 047259 1 FTNDVIEASDGSLYF-TVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCES 77 (225)
Q Consensus 1 ~pndv~~~~dG~iy~-td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~ 77 (225)
.||+|+++++|+||| ||.+ ++... ..++.....||++++.+|++++++.+ ...||||+|+||+++|||+..
T Consensus 477 sPDnL~fd~~G~LWf~TD~~--~~~~g----~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGD--SSNAG----DFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCC--CCCSG----GGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCC--cCccc----cccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 489999999999999 8876 33221 12234566899999988999988754 467999999999999999965
Q ss_pred C
Q 047259 78 W 78 (225)
Q Consensus 78 ~ 78 (225)
-
T Consensus 551 H 551 (592)
T 4a9v_A 551 H 551 (592)
T ss_dssp S
T ss_pred C
Confidence 3
No 122
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.58 E-value=3.5e-06 Score=74.21 Aligned_cols=121 Identities=8% Similarity=0.015 Sum_probs=74.1
Q ss_pred CCcEEEcCCCcEEEEc-CCCCCCcc-hhh-hhcccCCCCcEEEEEeCCCCeEEEEec---CccccceeEE--ecCCCEEE
Q 047259 2 TNDVIEASDGSLYFTV-SSKKYTPA-EYY-KDLVEGKPHGQLLKYDPELEETTVLHE---GFYFANGVAL--SKDENFVV 73 (225)
Q Consensus 2 pndv~~~~dG~iy~td-~~~~~~~~-~~~-~~~~~~~~~g~v~~~d~~~~~~~~~~~---~~~~pnGi~~--~~dg~~Ly 73 (225)
+-|+-+.+++++.+|. .+...++. .|. .++.. ....+|..||..++++...+. ....|.+|.+ +||++++|
T Consensus 190 ~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~-~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aY 268 (462)
T 2ece_A 190 AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKD-RYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGF 268 (462)
T ss_dssp CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHH-HSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEE
T ss_pred cceEEECCCCCEEEEccCcCccccccccchhhhhh-ccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEE
Confidence 3456667887655553 22110000 011 11111 346789999987776554432 2367888877 99999999
Q ss_pred EEeC-----CCCEEEEEEecCCCCCceeEE-------eccC----------CCCCCceEECCCCC-EEEEeec
Q 047259 74 VCES-----WKFRCRRYWLKGPRQGRLESF-------IEHL----------PGGPDNINLAPDGS-FWVALIK 123 (225)
Q Consensus 74 v~~~-----~~~~I~~~~~~~~~~~~~~~~-------~~~~----------~g~Pd~i~~d~~G~-l~v~~~~ 123 (225)
|+.. .++.|++|..+++.....+++ ...+ +..|.+|.+++||+ |||++.+
T Consensus 269 V~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg 341 (462)
T 2ece_A 269 INMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG 341 (462)
T ss_dssp EEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT
T ss_pred EEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC
Confidence 9998 888998877654211111111 0001 35689999999997 8999887
No 123
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.57 E-value=7.9e-07 Score=80.70 Aligned_cols=123 Identities=11% Similarity=0.057 Sum_probs=79.8
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCC--c-------chhh--------hhcc-cC--CCCcEEEEEeCCC--CeE-EEEecCc
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYT--P-------AEYY--------KDLV-EG--KPHGQLLKYDPEL--EET-TVLHEGF 57 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~--~-------~~~~--------~~~~-~~--~~~g~v~~~d~~~--~~~-~~~~~~~ 57 (225)
|..+++++||+ +|+|+.....+ + ..+. .... .+ .-.+.|-.+|..+ +++ ...+...
T Consensus 197 pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg 276 (595)
T 1fwx_A 197 LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA 276 (595)
T ss_dssp CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE
T ss_pred ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC
Confidence 67899999995 77776543221 0 0000 0000 01 0124588899875 333 3334445
Q ss_pred cccceeEEecCCCEEEEEeCCCCEEEEEEecCC------CCCc-eeEEecc-CCCCCCceEECCCCCEEEEeecC
Q 047259 58 YFANGVALSKDENFVVVCESWKFRCRRYWLKGP------RQGR-LESFIEH-LPGGPDNINLAPDGSFWVALIKM 124 (225)
Q Consensus 58 ~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~------~~~~-~~~~~~~-~~g~Pd~i~~d~~G~l~v~~~~~ 124 (225)
..|.|+.++|||+++||++...+.|..|+.+.. .+.. ..+..+. ....|.++++|++|++|++.+-.
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ld 351 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLD 351 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTT
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecC
Confidence 689999999999999999999999999998731 1111 1122221 23469999999999999998773
No 124
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.52 E-value=9e-07 Score=78.56 Aligned_cols=105 Identities=18% Similarity=0.182 Sum_probs=68.8
Q ss_pred CCcEEEcCCCc--EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeE----EE----EecC-----ccccceeEEe
Q 047259 2 TNDVIEASDGS--LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEET----TV----LHEG-----FYFANGVALS 66 (225)
Q Consensus 2 pndv~~~~dG~--iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~----~~----~~~~-----~~~pnGi~~~ 66 (225)
|-+|++.+||+ ||||+. .|+|+.++.+.... .- ..++ ....-||+++
T Consensus 16 P~~~a~~pdG~~rl~V~er------------------~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~ 77 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEK------------------EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFH 77 (463)
T ss_dssp EEEEECCSSSSCCEEEEET------------------TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEEC
T ss_pred ceEEEECCCCCeEEEEEeC------------------CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeC
Confidence 56789999985 999976 47888887642211 11 1111 3456789999
Q ss_pred cC---CCEEEEEeCC------------CCEEEEEEecCC---C--CCceeEEeccC-C---CCCCceEECCCCCEEEEee
Q 047259 67 KD---ENFVVVCESW------------KFRCRRYWLKGP---R--QGRLESFIEHL-P---GGPDNINLAPDGSFWVALI 122 (225)
Q Consensus 67 ~d---g~~Lyv~~~~------------~~~I~~~~~~~~---~--~~~~~~~~~~~-~---g~Pd~i~~d~~G~l~v~~~ 122 (225)
|+ .++|||+.+. ..+|.||.++.. . ....+++.+.. + -....|++++||.|||+..
T Consensus 78 P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 78 PNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp TTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred CCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 96 4569998753 148999998631 1 22344444321 1 1345799999999999988
Q ss_pred cC
Q 047259 123 KM 124 (225)
Q Consensus 123 ~~ 124 (225)
..
T Consensus 158 d~ 159 (463)
T 2wg3_C 158 DG 159 (463)
T ss_dssp CT
T ss_pred CC
Confidence 74
No 125
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.47 E-value=1.6e-06 Score=77.99 Aligned_cols=82 Identities=15% Similarity=0.044 Sum_probs=57.9
Q ss_pred cEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCC-CEEEEEEecCCCCCceeEEeccCCCCCCceE------
Q 047259 38 GQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWK-FRCRRYWLKGPRQGRLESFIEHLPGGPDNIN------ 110 (225)
Q Consensus 38 g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~-~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~------ 110 (225)
..|+.+|.++++.+.+.......+.++|+|||+.|+.++... ..|++++++++ ..+ ........+.+++
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~---~~~-~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG---SVE-DLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC---CEE-ECCCSCSHHHHHCCSEEEE
T ss_pred eEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC---cEE-EccCCCcChhhhhhccccc
Confidence 579999988788887766656679999999999998555432 38999998753 333 2222222234555
Q ss_pred --ECCCCCEEEEeec
Q 047259 111 --LAPDGSFWVALIK 123 (225)
Q Consensus 111 --~d~~G~l~v~~~~ 123 (225)
+++||.+|++...
T Consensus 251 ~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 251 LGYLPDGRLAVVARR 265 (582)
T ss_dssp EEECTTSCEEEEEEE
T ss_pred eeEcCCCcEEEEEEc
Confidence 9999988887765
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.46 E-value=1.3e-05 Score=69.48 Aligned_cols=101 Identities=15% Similarity=0.140 Sum_probs=66.1
Q ss_pred CcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC--C
Q 047259 3 NDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW--K 79 (225)
Q Consensus 3 ndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~--~ 79 (225)
+.+++.|||+ |+++.+. .....|+.+|..+++...+.........++|+|||+.|+++... .
T Consensus 226 ~~~~~spdg~~la~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~ 290 (415)
T 2hqs_A 226 GAPAFSPDGSKLAFALSK---------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 290 (415)
T ss_dssp EEEEECTTSSEEEEEECT---------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred cCEEEcCCCCEEEEEEec---------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCC
Confidence 3566777775 5555432 12457999998878877666555667889999999988776643 3
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEee
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALI 122 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~ 122 (225)
.+|+.+++++. ..+.+. ........++++++|+..+...
T Consensus 291 ~~i~~~d~~~~---~~~~l~-~~~~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 291 PQVYKVNINGG---APQRIT-WEGSQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp CEEEEEETTSS---CCEECC-CSSSEEEEEEECTTSSEEEEEE
T ss_pred cEEEEEECCCC---CEEEEe-cCCCcccCeEECCCCCEEEEEE
Confidence 48999998753 222222 1223345789999998554443
No 127
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.45 E-value=3.5e-06 Score=74.54 Aligned_cols=71 Identities=10% Similarity=0.156 Sum_probs=53.7
Q ss_pred eEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEecc--C------CCCCCceEECC----CCC
Q 047259 49 ETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEH--L------PGGPDNINLAP----DGS 116 (225)
Q Consensus 49 ~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~--~------~g~Pd~i~~d~----~G~ 116 (225)
+++++++++..|.+|++.|||+ |||++...++|++++.++ +..+.+... . .+.+-||++++ +|.
T Consensus 18 ~~~~~a~~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~---g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~ 93 (454)
T 1cru_A 18 DKKVILSNLNKPHALLWGPDNQ-IWLTERATGKILRVNPES---GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPY 93 (454)
T ss_dssp CEEEEECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTT---CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCE
T ss_pred EEEEEECCCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCC---CcEeEEecCCccccccCCCCceeEEEECCCcCcCCE
Confidence 5677888899999999999997 999999878999998643 233333321 0 12345999998 688
Q ss_pred EEEEeec
Q 047259 117 FWVALIK 123 (225)
Q Consensus 117 l~v~~~~ 123 (225)
|||+...
T Consensus 94 lYv~~s~ 100 (454)
T 1cru_A 94 IYISGTF 100 (454)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9999875
No 128
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.44 E-value=7e-06 Score=70.05 Aligned_cols=137 Identities=13% Similarity=0.125 Sum_probs=89.6
Q ss_pred EEEEEeCCCCeEEEEe-------cCccccceeEE--ecCCC--EEEEEeCCCCEEEEEEecCCCCC--ceeEEec-cCCC
Q 047259 39 QLLKYDPELEETTVLH-------EGFYFANGVAL--SKDEN--FVVVCESWKFRCRRYWLKGPRQG--RLESFIE-HLPG 104 (225)
Q Consensus 39 ~v~~~d~~~~~~~~~~-------~~~~~pnGi~~--~~dg~--~Lyv~~~~~~~I~~~~~~~~~~~--~~~~~~~-~~~g 104 (225)
++|.+|+.++.++.+. ..+..|.|+|+ +++.. ++||++.. +++..|.+.....+ ..+.... .+++
T Consensus 102 ~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgs 180 (355)
T 3amr_A 102 EIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNS 180 (355)
T ss_dssp EEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSS
T ss_pred EEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCC
Confidence 5677788777777662 33478999999 77544 57888765 79999887421111 1121121 2567
Q ss_pred CCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC--C----cEEEEEE
Q 047259 105 GPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH--G----KIIMDFN 177 (225)
Q Consensus 105 ~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~--G----~~~~~~~ 177 (225)
.|.||++|+ .|.||+++-. .+ |++++.+ + +++..+.
T Consensus 181 q~EgcvvDd~~g~Lyv~eEd------------------------------------~G-Iw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 181 QTEGMAADDEYGRLYIAEED------------------------------------EA-IWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp CEEEEEEETTTTEEEEEETT------------------------------------TE-EEEEECSTTSCSCCEEEEEBS
T ss_pred CcceEEEcCCCCeEEEeccc------------------------------------ce-EEEEeCCcCCCCCceEEEEec
Confidence 899999997 5889999866 34 9999944 3 3443332
Q ss_pred CCCCCcccceeEEEE--e---CCEEEEeeCCCCeEEEEeCCCc
Q 047259 178 DPNATYISFVTSAVE--F---EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 178 ~p~g~~~~~~t~~~~--~---~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.....+.+++. . .++|++++-+++...+|++.+.
T Consensus 224 --~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 224 --GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp --SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred --CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 2322223444443 2 1589999999999999999743
No 129
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=1.2e-05 Score=75.19 Aligned_cols=149 Identities=11% Similarity=0.167 Sum_probs=95.7
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC---ccccceeEEecCCCEEEEEeCCCC
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG---FYFANGVALSKDENFVVVCESWKF 80 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~---~~~pnGi~~~~dg~~Lyv~~~~~~ 80 (225)
++..+++|+||+... .+.|+++++.+++++..... ......|+.+++|+ ||++.. +
T Consensus 411 ~i~~d~~g~lWigt~------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~--~ 469 (781)
T 3v9f_A 411 CSLKDSEGNLWFGTY------------------LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTH--A 469 (781)
T ss_dssp EEEECTTSCEEEEET------------------TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEET--T
T ss_pred EEEECCCCCEEEEec------------------cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEEC--C
Confidence 455666777777643 25689999877777665321 23456788888875 999876 5
Q ss_pred EEEEEEecCCCCCceeEEeccC-----CCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 81 RCRRYWLKGPRQGRLESFIEHL-----PGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 81 ~I~~~~~~~~~~~~~~~~~~~~-----~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
.|++|+.++. ..+.+.... ......|+.|++|+||++..+
T Consensus 470 Gl~~~~~~~~---~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~-------------------------------- 514 (781)
T 3v9f_A 470 GVFVIDLASK---KVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG-------------------------------- 514 (781)
T ss_dssp EEEEEESSSS---SCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS--------------------------------
T ss_pred ceEEEeCCCC---eEEecccCcccccccceeEEEEEcCCCCEEEEEcC--------------------------------
Confidence 7999998653 222222111 123467899999999998864
Q ss_pred CCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEE-eCCEEEEeeCCCCeEEEEeCCC
Q 047259 156 GNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVE-FEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~-~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
+.+.+++++++....+..+.+..-..+..+.. .+|.||+++. .+-|.+++..+
T Consensus 515 -----~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~ 568 (781)
T 3v9f_A 515 -----GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARN 568 (781)
T ss_dssp -----SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTT
T ss_pred -----CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCC
Confidence 23788998876666665544321223455554 4799999986 33327776544
No 130
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.43 E-value=5e-06 Score=77.77 Aligned_cols=150 Identities=13% Similarity=0.132 Sum_probs=97.6
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCcc----ccceeEEecCCCEEEEEeCC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFY----FANGVALSKDENFVVVCESW 78 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~----~pnGi~~~~dg~~Lyv~~~~ 78 (225)
+++..+++|+||++..+ +.|+++|+++++++....... ..+.|..+++|+ ||++..
T Consensus 498 ~~i~~d~~g~lWigt~~------------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~T~- 557 (781)
T 3v9f_A 498 RSIAQDSEGRFWIGTFG------------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQ-MWLATG- 557 (781)
T ss_dssp EEEEECTTCCEEEEESS------------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSC-EEEEET-
T ss_pred EEEEEcCCCCEEEEEcC------------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCC-EEEEEC-
Confidence 46778889999998653 247889987777666543222 345788888887 999876
Q ss_pred CCEEEEEEecCCCCCceeEEec--cCCC-CCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 79 KFRCRRYWLKGPRQGRLESFIE--HLPG-GPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~~--~~~g-~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
.+-|.+|++++. ..+.+.. .++. ...++..|++|+||++...
T Consensus 558 ~Glv~~~d~~~~---~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~-------------------------------- 602 (781)
T 3v9f_A 558 EGLVCFPSARNF---DYQVFQRKEGLPNTHIRAISEDKNGNIWASTNT-------------------------------- 602 (781)
T ss_dssp TEEEEESCTTTC---CCEEECGGGTCSCCCCCEEEECSSSCEEEECSS--------------------------------
T ss_pred CCceEEECCCCC---cEEEccccCCCCCceEEEEEECCCCCEEEEcCC--------------------------------
Confidence 343389987643 3333332 1222 2357899999999998643
Q ss_pred CCCcceEEEEECCCCcEEEEEECCCCCc---ccceeEEEEeCCEEEEeeCCCCeEEEEeCCCc
Q 047259 156 GNDAGARIVKVDTHGKIIMDFNDPNATY---ISFVTSAVEFEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~~~~~p~g~~---~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.+++++.+....+...+|.. +..-+.+...+|+||++... -+.+++....
T Consensus 603 ------Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~--Gl~~f~p~~~ 657 (781)
T 3v9f_A 603 ------GISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSIN--GLCFFNPDIA 657 (781)
T ss_dssp ------CEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETT--EEEEECSCCG
T ss_pred ------ceEEEECCCCceEEecccCCccccccccCceEECCCCEEEEECCC--ceEEEChhhc
Confidence 3788999877667776544531 21112223357999999854 4777776544
No 131
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.41 E-value=2.1e-06 Score=73.20 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=68.5
Q ss_pred EEEcCCC-cEEEEcC-CCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEE
Q 047259 5 VIEASDG-SLYFTVS-SKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRC 82 (225)
Q Consensus 5 v~~~~dG-~iy~td~-~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I 82 (225)
+++++|| ++|++.. ....+- ...+.+.|+.||..++++........ |.+|+++|||++||++.. +.|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~--------~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v 327 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGT--------HKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNV 327 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTC--------TTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCE
T ss_pred EEEecCCCeEEEEEccCCCccc--------ccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeE
Confidence 7888885 6888864 100000 01235689999998887665555445 999999999999999985 899
Q ss_pred EEEEecCCCCCceeEEeccCCCCCCceEECCCCC
Q 047259 83 RRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS 116 (225)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~ 116 (225)
..|+.++..+.....+. .....|.+++++++|+
T Consensus 328 ~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 328 NVYDISQPEPKLLRTIE-GAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEECSSSSCEEEEEET-TSCSSEEEEEECCCSC
T ss_pred EEEECCCCcceeeEEec-cCCCCcEEEEecCCCC
Confidence 99998642112112211 2345799999999985
No 132
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.40 E-value=7.1e-06 Score=68.72 Aligned_cols=133 Identities=9% Similarity=0.059 Sum_probs=93.3
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC-C
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD-G 115 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~-G 115 (225)
...|++++.+....+.+..... ++++++++.||+++.+..+|+++++++. ..+.+... +..+.+.|+ |
T Consensus 128 ~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~---~~~~l~~~----~~~~~~~P~g~ 196 (302)
T 3s25_A 128 ATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ---SEALFYDC----NCYKPVVLDDT 196 (302)
T ss_dssp CEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT---EEEEEECS----CEEEEEEEETT
T ss_pred CceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC---CEEEEeCC----CccceeeecCC
Confidence 5689999987556666655432 5678999999999998899999999863 33333321 223445554 4
Q ss_pred CEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEeCC
Q 047259 116 SFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEFED 195 (225)
Q Consensus 116 ~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~~~ 195 (225)
.||.++... ...|.+.+.+|.-...+.. .. + ..+.+.++
T Consensus 197 ~iy~t~~~~-----------------------------------~~~I~~~~ldG~~~~~Lt~--~~-~---~~~~~~g~ 235 (302)
T 3s25_A 197 NVYYMDVNR-----------------------------------DNAIVHVNINNPNPVVLTE--AN-I---EHYNVYGS 235 (302)
T ss_dssp EEEEEEGGG-----------------------------------TTEEEEECSSSCCCEECSC--SC-E---EEEEEETT
T ss_pred EEEEEEcCC-----------------------------------CcEEEEEECCCCCeEEEeC--CC-c---ceEEECCC
Confidence 678877651 3589999999977666653 22 2 22566799
Q ss_pred EEEEe-eCCCCeEEEEeCCCcccccCC
Q 047259 196 NLYMA-SIQSKFVGKLPLNTPEAELAP 221 (225)
Q Consensus 196 ~Lyv~-~~~~~~i~~~~~~~~~~~~~~ 221 (225)
+||.+ +...+.|.++++++...+..+
T Consensus 236 ~Iy~~~~~~~~~i~~~~~DG~~r~~l~ 262 (302)
T 3s25_A 236 LIFYQRGGDNPALCVVKNDGTGFKELA 262 (302)
T ss_dssp EEEEEECSSSCEEEEEETTSCCCEEEE
T ss_pred EEEEEECCCCcEEEEEECCCCccEEee
Confidence 99997 455789999999998765543
No 133
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.40 E-value=2.9e-06 Score=77.04 Aligned_cols=174 Identities=12% Similarity=0.034 Sum_probs=107.3
Q ss_pred CCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cCccccceeEE-e-cCCCEEEEEe--------
Q 047259 10 DGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EGFYFANGVAL-S-KDENFVVVCE-------- 76 (225)
Q Consensus 10 dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~pnGi~~-~-~dg~~Lyv~~-------- 76 (225)
||+ +|+++.. +++|.++|.++.++..++ .....|.|+++ + ||+++||++.
T Consensus 100 DG~~lfVnd~~-----------------~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~ 162 (595)
T 1fwx_A 100 DGRFLFMNDKA-----------------NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVN 162 (595)
T ss_dssp EEEEEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSC
T ss_pred CCCEEEEEcCC-----------------CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCC
Confidence 664 8887775 679999999887766643 34567999998 5 9999999994
Q ss_pred ---------CCCCEEEEEEecCCCCCceeEEec-cCCCCCCceEECCCCC-EEEEeecCCc--hhhhhhhcCh------h
Q 047259 77 ---------SWKFRCRRYWLKGPRQGRLESFIE-HLPGGPDNINLAPDGS-FWVALIKMNQ--TGVRAIQSCP------D 137 (225)
Q Consensus 77 ---------~~~~~I~~~~~~~~~~~~~~~~~~-~~~g~Pd~i~~d~~G~-l~v~~~~~~~--~~~~~~~~~~------~ 137 (225)
...+.+..+|.++ .++..+ ..++.|++++++++|+ +|+++..... .+.+...... .
T Consensus 163 dg~~l~~~~~~~~~vtvID~~t-----~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~ 237 (595)
T 1fwx_A 163 DGTNMEDVANYVNVFTAVDADK-----WEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFN 237 (595)
T ss_dssp SSSSTTCGGGEEEEEEEEETTT-----TEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEE
T ss_pred CCcccccccccCceEEEEECCC-----CeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEee
Confidence 3345788888753 222222 1446899999999987 5777655321 1111111000 1
Q ss_pred HHHHHHhhhhhhhhhccCCCCcceEEEEECCC---CcE-EEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCC
Q 047259 138 KWKLLQAYPELINLLIPLGNDAGARIVKVDTH---GKI-IMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 138 ~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~---G~~-~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~ 213 (225)
+.+....+|.+-... -+.|.++|.. +++ +..+..+.. +.-..+.+++.++|+++..++.|.+++..
T Consensus 238 ~~~~~~~v~~Gk~~~-------i~~V~VID~~~~~~~~~~~~Ipvg~~---PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 238 IAEIEKAIAAGDYQE-------LNGVKVVDGRKEASSLFTRYIPIANN---PHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp HHHHHHHHHHTCSEE-------ETTEEEEECSGGGCCSSEEEEEEESS---CCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred ccceeEeccCCCeeE-------ECcEEEEeCcccCCceeEEEEecCCC---ceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 222222233331111 1237777775 444 555554211 11222345688999999999999999998
Q ss_pred Cc
Q 047259 214 TP 215 (225)
Q Consensus 214 ~~ 215 (225)
+.
T Consensus 308 ~~ 309 (595)
T 1fwx_A 308 RF 309 (595)
T ss_dssp GH
T ss_pred cc
Confidence 65
No 134
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.27 E-value=2.4e-05 Score=73.25 Aligned_cols=145 Identities=14% Similarity=0.203 Sum_probs=92.0
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC-----c--cccceeEEecCCCEEEEEe
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG-----F--YFANGVALSKDENFVVVCE 76 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-----~--~~pnGi~~~~dg~~Lyv~~ 76 (225)
.+..+++|+||++.. +.|+++++++++++..... + .....|..+++|+ ||++.
T Consensus 456 ~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt 515 (795)
T 4a2l_A 456 AILPDGEGNLWLGTL-------------------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKR-LWIGG 515 (795)
T ss_dssp EEEECSSSCEEEEES-------------------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCC-EEEEE
T ss_pred EEEECCCCCEEEEec-------------------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCC-EEEEe
Confidence 355566666776633 2478889877776654321 1 3456788899987 99988
Q ss_pred CCCCEEEEEEecCCCCCceeEEec--cCCC----CCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhh
Q 047259 77 SWKFRCRRYWLKGPRQGRLESFIE--HLPG----GPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELIN 150 (225)
Q Consensus 77 ~~~~~I~~~~~~~~~~~~~~~~~~--~~~g----~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~ 150 (225)
. +.|++++.++. .. .+.. ...+ ....|..|++|+||++...
T Consensus 516 ~--~Gl~~~~~~~~---~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--------------------------- 562 (795)
T 4a2l_A 516 E--EGLSVFKQEGL---DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--------------------------- 562 (795)
T ss_dssp S--SCEEEEEEETT---EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS---------------------------
T ss_pred C--CceEEEeCCCC---eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC---------------------------
Confidence 6 57999998753 22 2221 1112 2346888999999998743
Q ss_pred hhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCC
Q 047259 151 LLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 151 ~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+.++|++......+...+|-.-..+..++.+ +|+||+++ .+-|.+++..+
T Consensus 563 -----------Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~ 614 (795)
T 4a2l_A 563 -----------GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNPET 614 (795)
T ss_dssp -----------CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTT
T ss_pred -----------CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcCCC
Confidence 47788887655556654333211234445544 79999998 46788887654
No 135
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.27 E-value=5.4e-05 Score=68.84 Aligned_cols=159 Identities=12% Similarity=-0.025 Sum_probs=91.9
Q ss_pred CcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCC-CC---eEEEEecC-ccccceeEEecCCCEEEEEe
Q 047259 3 NDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPE-LE---ETTVLHEG-FYFANGVALSKDENFVVVCE 76 (225)
Q Consensus 3 ndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~---~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~ 76 (225)
..+++.|||+ |+++..... + . .-....|+.+|.+ +| +.+.+..+ ......++|+|||+ +|++.
T Consensus 191 ~~~~~SpDG~~la~~~~~~~-~-~--------~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~ 259 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHP-R-M--------PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVAT 259 (662)
T ss_dssp CCCEECTTSSEEEEEEECTT-C-C--------TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEE
T ss_pred cCceECCCCCEEEEEECCCC-C-C--------CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEE
Confidence 4578889996 666543210 0 0 0013579999987 46 55565544 46678899999999 55554
Q ss_pred CCCC--EEEEEEecCCCCCceeEEeccCCC------C--CCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhh
Q 047259 77 SWKF--RCRRYWLKGPRQGRLESFIEHLPG------G--PDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYP 146 (225)
Q Consensus 77 ~~~~--~I~~~~~~~~~~~~~~~~~~~~~g------~--Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p 146 (225)
...+ +|++++++++ ..+.+...... . ...+++.++|+++++... .
T Consensus 260 ~~~~~~~l~~~~~~~~---~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~--------------------- 314 (662)
T 3azo_A 260 DRTGWWNLHRVDPATG---AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G--------------------- 314 (662)
T ss_dssp CTTSSCEEEEECTTTC---CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S---------------------
T ss_pred CCCCCeEEEEEECCCC---ceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C---------------------
Confidence 4445 8999887542 22222221100 1 246788888888776544 2
Q ss_pred hhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEE-EEeCCEEEEeeCCCC---eEEEEeCCC
Q 047259 147 ELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSA-VEFEDNLYMASIQSK---FVGKLPLNT 214 (225)
Q Consensus 147 ~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~-~~~~~~Lyv~~~~~~---~i~~~~~~~ 214 (225)
...++++|.++..+..+..+.+. ...+ ..+++.+++...... .|+++++.+
T Consensus 315 -------------~~~l~~~d~~~~~~~~l~~~~~~----~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 315 -------------AAVLGILDPESGELVDAAGPWTE----WAATLTVSGTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp -------------SCEEEEEETTTTEEEECCSSCCE----EEEEEEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred -------------ccEEEEEECCCCcEEEecCCCCe----EEEEEecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 45788888875545566554332 2333 445666555543332 566666544
No 136
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.25 E-value=6.4e-05 Score=65.08 Aligned_cols=80 Identities=10% Similarity=-0.045 Sum_probs=55.8
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC--CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW--KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~--~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
...|+.+|..+++...+.........++|+|||+.|+++... ...|+.+++++. ....+.. ..+....+++.++
T Consensus 202 ~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~---~~~~l~~-~~~~~~~~~~spd 277 (415)
T 2hqs_A 202 RSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG---QIRQVTD-GRSNNTEPTWFPD 277 (415)
T ss_dssp SCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC---CEEECCC-CSSCEEEEEECTT
T ss_pred CcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC---CEEeCcC-CCCcccceEECCC
Confidence 458999998888877766555567899999999988766543 456999998653 3333322 2333457899999
Q ss_pred CCEEEE
Q 047259 115 GSFWVA 120 (225)
Q Consensus 115 G~l~v~ 120 (225)
|+..+.
T Consensus 278 g~~l~~ 283 (415)
T 2hqs_A 278 SQNLAF 283 (415)
T ss_dssp SSEEEE
T ss_pred CCEEEE
Confidence 984443
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.22 E-value=0.0001 Score=58.75 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=51.0
Q ss_pred CCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCC--EEEEEEecCCCCCceeEEeccCCCCCCceEECC
Q 047259 36 PHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKF--RCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP 113 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~--~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~ 113 (225)
....||.++..+++...+.. ....+.++|+||++.|+++....+ +|+.++.++. ....+. .....+..+++++
T Consensus 108 ~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~-~~~~~~~~~~~s~ 182 (297)
T 2ojh_A 108 GKSAIYLLPSTGGTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---VETRLT-HGEGRNDGPDYSP 182 (297)
T ss_dssp SSCEEEEEETTCCCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC---CEEECC-CSSSCEEEEEECT
T ss_pred CcceEEEEECCCCceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCC---cceEcc-cCCCccccceECC
Confidence 36789999987666555433 334788999999998886665555 5555555432 232222 2334567899999
Q ss_pred CCCEEE
Q 047259 114 DGSFWV 119 (225)
Q Consensus 114 ~G~l~v 119 (225)
+|+..+
T Consensus 183 dg~~l~ 188 (297)
T 2ojh_A 183 DGRWIY 188 (297)
T ss_dssp TSSEEE
T ss_pred CCCEEE
Confidence 998443
No 138
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.21 E-value=3.1e-05 Score=72.53 Aligned_cols=144 Identities=12% Similarity=0.152 Sum_probs=90.7
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe-----cCc--cccceeEEecCCCEEEEE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH-----EGF--YFANGVALSKDENFVVVC 75 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-----~~~--~~pnGi~~~~dg~~Lyv~ 75 (225)
+++..+++|+||++... .|++++.+++++ ... .++ ...+.|..+++|+ ||++
T Consensus 501 ~~i~~d~~g~lWigt~~-------------------Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~-lWig 559 (795)
T 4a2l_A 501 TTLFRDSHKRLWIGGEE-------------------GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGI-IWVG 559 (795)
T ss_dssp EEEEECTTCCEEEEESS-------------------CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSC-EEEE
T ss_pred EEEEECCCCCEEEEeCC-------------------ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCC-EEEE
Confidence 34667778888887442 467777765555 321 111 2346788889987 9998
Q ss_pred eCCCCEEEEEEecCCCCCceeEEeccCCCCCC----ceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhh
Q 047259 76 ESWKFRCRRYWLKGPRQGRLESFIEHLPGGPD----NINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINL 151 (225)
Q Consensus 76 ~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd----~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~ 151 (225)
... .|.+|++++. ..+.+. ...+.|+ .|..|++|+||++...
T Consensus 560 T~~--Gl~~~d~~~~---~~~~~~-~~~gl~~~~i~~i~~d~~g~lWi~t~~---------------------------- 605 (795)
T 4a2l_A 560 TRE--GFYCFNEKDK---QIKRYN-TTNGLPNNVVYGILEDSFGRLWLSTNR---------------------------- 605 (795)
T ss_dssp ESS--CEEEEETTTT---EEEEEC-GGGTCSCSCEEEEEECTTSCEEEEETT----------------------------
T ss_pred eCC--CceeECCCCC---cEEEeC-CCCCCchhheEEEEECCCCCEEEEcCC----------------------------
Confidence 764 7999997642 333332 2234454 4889999999998843
Q ss_pred hccCCCCcceEEEEECCCCcEEEEEECCCCCc---ccceeEEEEeCCEEEEeeCCCCeEEEEeCC
Q 047259 152 LIPLGNDAGARIVKVDTHGKIIMDFNDPNATY---ISFVTSAVEFEDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 152 ~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~---~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~ 213 (225)
.+.+++++......+...+|-. +...+.+...+|.||+++.. -+.+++..
T Consensus 606 ----------Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~--Gl~~~~p~ 658 (795)
T 4a2l_A 606 ----------GISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGIN--GITTFRPE 658 (795)
T ss_dssp ----------EEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETT--EEEEECGG
T ss_pred ----------ceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCC--ceEEEcHH
Confidence 5788998866666676544431 21112223357999999754 46666644
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.19 E-value=0.0001 Score=67.45 Aligned_cols=140 Identities=17% Similarity=0.139 Sum_probs=86.8
Q ss_pred CCcEEEEEeCCCCeEEEEec---CccccceeEEecCCCEEEEEeCCC----CEEEEEEecCCCCCceeEEec-cCCC---
Q 047259 36 PHGQLLKYDPELEETTVLHE---GFYFANGVALSKDENFVVVCESWK----FRCRRYWLKGPRQGRLESFIE-HLPG--- 104 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~---~~~~pnGi~~~~dg~~Lyv~~~~~----~~I~~~~~~~~~~~~~~~~~~-~~~g--- 104 (225)
....|+.+|.++++...+.. ....+..++|+|||+.|+++.... ..|+.++++++ .....+.. ....
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g--~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG--RFVRTLFVETDKHYVE 310 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC--CEEEEEEEEECSSCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC--ceeeEEEEccCCCeEC
Confidence 45789999998787666542 234567899999999888865432 48888887642 02222221 1111
Q ss_pred CCCceEECC--CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCC
Q 047259 105 GPDNINLAP--DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNAT 182 (225)
Q Consensus 105 ~Pd~i~~d~--~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~ 182 (225)
....+++.+ +|+++++.... ....|+.++.+|+.+..+.....
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~----------------------------------g~~~l~~~~~~~~~~~~l~~~~~- 355 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRD----------------------------------GWNHLYLYDTTGRLIRQVTKGEW- 355 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTT----------------------------------SSCEEEEEETTSCEEEECCCSSS-
T ss_pred ccCCceeecCCCCEEEEEEccC----------------------------------CccEEEEEECCCCEEEecCCCCe-
Confidence 236789999 99855443221 14578888877776666654222
Q ss_pred cccceeE-EEE--eCCEEEEeeCCCC----eEEEEeCCCc
Q 047259 183 YISFVTS-AVE--FEDNLYMASIQSK----FVGKLPLNTP 215 (225)
Q Consensus 183 ~~~~~t~-~~~--~~~~Lyv~~~~~~----~i~~~~~~~~ 215 (225)
.... +.. +++.||++....+ .|+++++.+.
T Consensus 356 ---~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 356 ---EVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp ---CEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred ---EEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 1222 222 3567888877655 7888887654
No 140
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.18 E-value=0.0002 Score=59.55 Aligned_cols=132 Identities=13% Similarity=0.064 Sum_probs=82.8
Q ss_pred CcEEEEEeCCCCeEEEEecCc-cccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCC
Q 047259 37 HGQLLKYDPELEETTVLHEGF-YFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG 115 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~-~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G 115 (225)
.|.|..+|..+++......+. ...+.++|+||++ ++++-+..+.|..+++... .....+. ...+....+++.++|
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~--~~~~~~~-~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHA--NLAGTLS-GHASWVLNVAFCPDD 260 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTC--CEEEEEC-CCSSCEEEEEECTTS
T ss_pred CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCc--ceeEEEc-CCCCceEEEEECCCC
Confidence 678888898777665545443 3458999999998 5566667788999998642 1122222 222335678999999
Q ss_pred CEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEEe-
Q 047259 116 SFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVEF- 193 (225)
Q Consensus 116 ~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~~- 193 (225)
.++++... .+.|...|. .++.+..+....+ .+..+...
T Consensus 261 ~~l~s~s~------------------------------------D~~v~iwd~~~~~~~~~~~~h~~----~v~~v~~s~ 300 (321)
T 3ow8_A 261 THFVSSSS------------------------------------DKSVKVWDVGTRTCVHTFFDHQD----QVWGVKYNG 300 (321)
T ss_dssp SEEEEEET------------------------------------TSCEEEEETTTTEEEEEECCCSS----CEEEEEECT
T ss_pred CEEEEEeC------------------------------------CCcEEEEeCCCCEEEEEEcCCCC----cEEEEEECC
Confidence 98777655 334555554 3666666654333 24455543
Q ss_pred CCEEEEeeCCCCeEEEEeC
Q 047259 194 EDNLYMASIQSKFVGKLPL 212 (225)
Q Consensus 194 ~~~Lyv~~~~~~~i~~~~~ 212 (225)
++...++....+.|..++.
T Consensus 301 ~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 301 NGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp TSSEEEEEETTCCEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEeC
Confidence 4555555556667766654
No 141
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.18 E-value=2.6e-05 Score=70.89 Aligned_cols=113 Identities=15% Similarity=0.075 Sum_probs=71.7
Q ss_pred CcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC------CeEEEEe-cCccccceeEEecCCCEEEE
Q 047259 3 NDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL------EETTVLH-EGFYFANGVALSKDENFVVV 74 (225)
Q Consensus 3 ndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~------~~~~~~~-~~~~~pnGi~~~~dg~~Lyv 74 (225)
.++++.|||+ |+++..... + .........|+.+|.++ ++.+.+. .+......++|||||++|++
T Consensus 133 ~~~~~spDg~~l~~~~~~~~-~-------~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~ 204 (662)
T 3azo_A 133 ADPVLLPERGEVWCMAEEFT-G-------EGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVW 204 (662)
T ss_dssp EEEEEETTTTEEEEEEEEEC-S-------SSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEE
T ss_pred cCcEECCCCCEEEEEEeccc-C-------CCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEE
Confidence 3577888885 555533200 0 00012346899999887 6777776 65667788999999998876
Q ss_pred EeCC-------CCEEEEEEecC-CCCCceeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 75 CESW-------KFRCRRYWLKG-PRQGRLESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 75 ~~~~-------~~~I~~~~~~~-~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
+... ...|+.+++++ +..+..+.+..........+++.+||++|++...
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC
Confidence 6543 25899999873 2122343443322344567899999997765543
No 142
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.18 E-value=0.00015 Score=64.37 Aligned_cols=133 Identities=13% Similarity=0.120 Sum_probs=81.1
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS 116 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~ 116 (225)
.+.|..||.....+..+...-....+++++||++.| ++...++.|..++.++. ....+. ........+++.++|+
T Consensus 406 d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l-~~~~~d~~v~~w~~~~~---~~~~~~-~~~~~v~~~~~spd~~ 480 (577)
T 2ymu_A 406 DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTI-ASASDDKTVKLWNRNGQ---LLQTLT-GHSSSVRGVAFSPDGQ 480 (577)
T ss_dssp TSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTSC---EEEEEE-CCSSCEEEEEECTTSC
T ss_pred CCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEE-EEEcCCCEEEEEECCCC---EEEEEc-CCCCCEEEEEEcCCCC
Confidence 567777886533334444444556789999999855 45556678888887542 223332 2233456899999999
Q ss_pred EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CC
Q 047259 117 FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-ED 195 (225)
Q Consensus 117 l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~ 195 (225)
+.++... .+.|...|.+|+.+..+....+ .++.++.. ++
T Consensus 481 ~las~~~------------------------------------d~~i~iw~~~~~~~~~~~~h~~----~v~~l~~s~dg 520 (577)
T 2ymu_A 481 TIASASD------------------------------------DKTVKLWNRNGQLLQTLTGHSS----SVRGVAFSPDG 520 (577)
T ss_dssp EEEEEET------------------------------------TSEEEEEETTSCEEEEEECCSS----CEEEEEECTTS
T ss_pred EEEEEeC------------------------------------CCEEEEEcCCCCEEEEEeCCCC----CEEEEEEcCCC
Confidence 8887655 3456666777887777765433 24444442 44
Q ss_pred EEEEeeCCCCeEEEEeCCC
Q 047259 196 NLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 196 ~Lyv~~~~~~~i~~~~~~~ 214 (225)
++.++......|..+++++
T Consensus 521 ~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 521 QTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SCEEEEETTSEEEEECTTS
T ss_pred CEEEEEECcCEEEEEeCCC
Confidence 4444444556666666543
No 143
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.16 E-value=0.00028 Score=57.61 Aligned_cols=130 Identities=12% Similarity=0.030 Sum_probs=82.4
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS 116 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~ 116 (225)
.|.|..+|..+++.............++++|+++.|+++. ..+.|..+++... ....+. ...+....+++.++|+
T Consensus 204 dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~---~~~~~~-~~~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKP---DKYQLH-LHESCVLSLKFAYCGK 278 (337)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSS---CEEEEC-CCSSCEEEEEECTTSS
T ss_pred CCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEc-CCCcEEEEECCCC---CeEEEc-CCccceeEEEECCCCC
Confidence 6788899987776655555556678999999999666554 5678999998652 222222 2334567899999999
Q ss_pred EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEe-C
Q 047259 117 FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEF-E 194 (225)
Q Consensus 117 l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~-~ 194 (225)
++++... .+.|..++.+ ++.+...... + .++.+... +
T Consensus 279 ~l~~~~~------------------------------------dg~i~~~~~~~~~~~~~~~~~-~----~v~~~~~s~~ 317 (337)
T 1gxr_A 279 WFVSTGK------------------------------------DNLLNAWRTPYGASIFQSKES-S----SVLSCDISVD 317 (337)
T ss_dssp EEEEEET------------------------------------TSEEEEEETTTCCEEEEEECS-S----CEEEEEECTT
T ss_pred EEEEecC------------------------------------CCcEEEEECCCCeEEEEecCC-C----cEEEEEECCC
Confidence 8777655 4566666654 5655444432 2 24445442 4
Q ss_pred CEEEEeeCCCCeEEEEeC
Q 047259 195 DNLYMASIQSKFVGKLPL 212 (225)
Q Consensus 195 ~~Lyv~~~~~~~i~~~~~ 212 (225)
+.++++....+.|..+++
T Consensus 318 ~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 318 DKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SCEEEEEETTSCEEEEEE
T ss_pred CCEEEEecCCCeEEEEEE
Confidence 444454445677766653
No 144
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.12 E-value=0.00021 Score=59.26 Aligned_cols=77 Identities=13% Similarity=0.062 Sum_probs=53.9
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC--------------------------CCEEEEEEecCC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW--------------------------KFRCRRYWLKGP 90 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~--------------------------~~~I~~~~~~~~ 90 (225)
...||.++.++++...+..... ...++|+|||+.|+++... ...|++++++++
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred cceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 4579999988787776654444 7899999999988777532 367888888653
Q ss_pred CCCce-eEEeccCCCCCCceEECCCCCEEEEe
Q 047259 91 RQGRL-ESFIEHLPGGPDNINLAPDGSFWVAL 121 (225)
Q Consensus 91 ~~~~~-~~~~~~~~g~Pd~i~~d~~G~l~v~~ 121 (225)
.. +.+.. + ....+++.++| ++++.
T Consensus 163 ---~~~~~l~~--~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 163 ---EVIEEFEK--P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp ---EEEEEEEE--E-TTCEEEEETTE-EEEEE
T ss_pred ---eEEeeecC--C-CcccccCCCCe-EEEEE
Confidence 33 33332 3 46788999999 65554
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.11 E-value=0.00021 Score=56.90 Aligned_cols=94 Identities=16% Similarity=0.118 Sum_probs=61.3
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC-CeEEEEecCc--cccceeEEecCCCEEEEEeC--
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL-EETTVLHEGF--YFANGVALSKDENFVVVCES-- 77 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-~~~~~~~~~~--~~pnGi~~~~dg~~Lyv~~~-- 77 (225)
..+++.+||+.+++.. .+.|+.+|..+ ++...+.... .....++|+|||+.|+++..
T Consensus 45 ~~~~~spdg~~l~~~~------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 106 (297)
T 2ojh_A 45 EAPNWSPDGKYLLLNS------------------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVE 106 (297)
T ss_dssp EEEEECTTSSEEEEEE------------------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTT
T ss_pred EeeEECCCCCEEEEEc------------------CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCC
Confidence 4566777776444422 46899999887 7666655443 45688999999998877763
Q ss_pred -CCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEE
Q 047259 78 -WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWV 119 (225)
Q Consensus 78 -~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v 119 (225)
...+|+.++.++. ....+.. ......+++.++|+..+
T Consensus 107 ~~~~~l~~~~~~~~---~~~~~~~--~~~~~~~~~spdg~~l~ 144 (297)
T 2ojh_A 107 FGKSAIYLLPSTGG---TPRLMTK--NLPSYWHGWSPDGKSFT 144 (297)
T ss_dssp TSSCEEEEEETTCC---CCEECCS--SSSEEEEEECTTSSEEE
T ss_pred CCcceEEEEECCCC---ceEEeec--CCCccceEECCCCCEEE
Confidence 3578888887652 2222221 12245678999998443
No 146
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.09 E-value=0.00029 Score=62.48 Aligned_cols=127 Identities=13% Similarity=0.126 Sum_probs=80.7
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS 116 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~ 116 (225)
.+.|..+|.....+..+.........++++||+++| ++-...+.|..++.++. ....+.. .......+++.++|+
T Consensus 447 d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~l-as~~~d~~i~iw~~~~~---~~~~~~~-h~~~v~~l~~s~dg~ 521 (577)
T 2ymu_A 447 DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNRNGQ---LLQTLTG-HSSSVRGVAFSPDGQ 521 (577)
T ss_dssp TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEE-EEEETTSEEEEEETTSC---EEEEEEC-CSSCEEEEEECTTSS
T ss_pred CCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEE-EEEeCCCEEEEEcCCCC---EEEEEeC-CCCCEEEEEEcCCCC
Confidence 567777887544444444445566899999999854 55556778888886542 2333332 233456899999999
Q ss_pred EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CC
Q 047259 117 FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-ED 195 (225)
Q Consensus 117 l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~ 195 (225)
+.++... .+.|...|.+|+.+..+....+ .++.+.+. ++
T Consensus 522 ~l~s~~~------------------------------------dg~v~lwd~~~~~~~~~~~h~~----~v~~~~fs~dg 561 (577)
T 2ymu_A 522 TIASASD------------------------------------DKTVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDG 561 (577)
T ss_dssp CEEEEET------------------------------------TSEEEEECTTSCEEEEEECCSS----CEEEEEECTTS
T ss_pred EEEEEEC------------------------------------cCEEEEEeCCCCEEEEEcCCCC----CEEEEEEcCCC
Confidence 7776655 4567777888988888875433 35555553 45
Q ss_pred EEEEeeCCCCeEE
Q 047259 196 NLYMASIQSKFVG 208 (225)
Q Consensus 196 ~Lyv~~~~~~~i~ 208 (225)
+.+++......|.
T Consensus 562 ~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 562 QTIASASSDKTVK 574 (577)
T ss_dssp SCEEEEETTSCEE
T ss_pred CEEEEEeCCCEEE
Confidence 5555544444443
No 147
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.08 E-value=0.00028 Score=59.34 Aligned_cols=101 Identities=18% Similarity=0.010 Sum_probs=63.8
Q ss_pred CcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccc-eeEEecCCCEEEEEeCCCC
Q 047259 3 NDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFAN-GVALSKDENFVVVCESWKF 80 (225)
Q Consensus 3 ndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pn-Gi~~~~dg~~Lyv~~~~~~ 80 (225)
+.+++.|||+ |+|+... .+..+||.+|.++++.+.+..+..... +++|+|||+.|+++... .
T Consensus 39 ~~~~~SpDg~~l~~~~~~---------------~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-~ 102 (388)
T 3pe7_A 39 YQKCFTRDGSKLLFGGAF---------------DGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-R 102 (388)
T ss_dssp TSCCBCTTSCEEEEEECT---------------TSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-T
T ss_pred cCccCCCCCCEEEEEEcC---------------CCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-C
Confidence 3467788885 5555432 124479999998888877765544443 78999999988877753 6
Q ss_pred EEEEEEecCCCCCceeEEeccCCCCC--CceEECCCCCEEEEee
Q 047259 81 RCRRYWLKGPRQGRLESFIEHLPGGP--DNINLAPDGSFWVALI 122 (225)
Q Consensus 81 ~I~~~~~~~~~~~~~~~~~~~~~g~P--d~i~~d~~G~l~v~~~ 122 (225)
.|++++++++ ..+.+.....+.. .....+++|+++++..
T Consensus 103 ~l~~~d~~~g---~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 143 (388)
T 3pe7_A 103 NLMRVDLATL---EENVVYQVPAEWVGYGTWVANSDCTKLVGIE 143 (388)
T ss_dssp EEEEEETTTC---CEEEEEECCTTEEEEEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCC---cceeeeechhhcccccceeECCCCCeecccc
Confidence 8999998753 3333332111111 1133588898777543
No 148
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.08 E-value=0.00045 Score=56.44 Aligned_cols=141 Identities=13% Similarity=0.139 Sum_probs=81.8
Q ss_pred CCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 36 PHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
..|.|..+|..+++....... ......++++|+++.| ++-...+.|..+++... .....+..........++++++
T Consensus 127 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~ 203 (312)
T 4ery_A 127 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWDTASG--QCLKTLIDDDNPPVSFVKFSPN 203 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTC--CEEEEECCSSCCCEEEEEECTT
T ss_pred CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEE-EEEeCCCcEEEEECCCC--ceeeEEeccCCCceEEEEECCC
Confidence 367788888876665444433 3445789999999844 55556788999998642 1122222111122346889999
Q ss_pred CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEe
Q 047259 115 GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEF 193 (225)
Q Consensus 115 G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~ 193 (225)
|++.++... .+.|..+|.. ++.+..+.................
T Consensus 204 ~~~l~~~~~------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 204 GKYILAATL------------------------------------DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp SSEEEEEET------------------------------------TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred CCEEEEEcC------------------------------------CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 998777655 3456666654 666666654333211111111223
Q ss_pred CCEEEEeeCCCCeEEEEeCCCc
Q 047259 194 EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 194 ~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
++.++++....+.|..+++...
T Consensus 248 ~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 248 GGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp SSCEEEECCTTSCEEEEETTTC
T ss_pred CCcEEEEECCCCEEEEEECCCc
Confidence 4555566666677777776543
No 149
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.07 E-value=0.00014 Score=64.44 Aligned_cols=74 Identities=16% Similarity=0.290 Sum_probs=50.1
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhc-ccCCCCcEEEEEeCCCC--------------------eEEEEecCccccc
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDL-VEGKPHGQLLKYDPELE--------------------ETTVLHEGFYFAN 61 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~-~~~~~~g~v~~~d~~~~--------------------~~~~~~~~~~~pn 61 (225)
..|++++||.|||+...... ........ -.....|.|+|++++.. ..++.+.++..|.
T Consensus 142 ~~l~fgpDG~LYv~~Gd~~~-~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~ 220 (463)
T 2wg3_C 142 GQLLFGPDGFLYIILGDGMI-TLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPG 220 (463)
T ss_dssp EEEEECTTSCEEEEECCTTC-CHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCC
T ss_pred CcEeECCCCcEEEEeCCCCC-CCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcc
Confidence 46899999999999665211 10000000 01345899999999742 2356778899999
Q ss_pred eeEEecC-----CC-EEEEEeC
Q 047259 62 GVALSKD-----EN-FVVVCES 77 (225)
Q Consensus 62 Gi~~~~d-----g~-~Lyv~~~ 77 (225)
|++|+|+ |+ ++|++|.
T Consensus 221 gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 221 RCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp BEEEESSCSSTTCSEEEEEECC
T ss_pred eEEECCCCCCcccceEEEeccc
Confidence 9999997 33 6788886
No 150
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.06 E-value=5.4e-05 Score=68.35 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=78.6
Q ss_pred cccceeEEecCCCEEEEEeCCC---------------------CEEEEEEecCC----CCCceeEEecc-C---------
Q 047259 58 YFANGVALSKDENFVVVCESWK---------------------FRCRRYWLKGP----RQGRLESFIEH-L--------- 102 (225)
Q Consensus 58 ~~pnGi~~~~dg~~Lyv~~~~~---------------------~~I~~~~~~~~----~~~~~~~~~~~-~--------- 102 (225)
..|.+|+++|..+.||++-+++ ++|+|+..++. ....+++|+.. .
T Consensus 384 dRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~ 463 (592)
T 4a9v_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred cCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccccc
Confidence 3689999999666799997642 78999998642 12234555420 0
Q ss_pred -----------CCCCCceEECCCCCEEE-EeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-
Q 047259 103 -----------PGGPDNINLAPDGSFWV-ALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH- 169 (225)
Q Consensus 103 -----------~g~Pd~i~~d~~G~l~v-~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~- 169 (225)
-..||+|++|++|+||+ ++...... ..+. .. ....|++++++
T Consensus 464 ~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~--------g~~~---------------~~--gnn~v~~~dp~t 518 (592)
T 4a9v_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNA--------GDFA---------------GM--GNNQMLCADPAT 518 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCS--------GGGT---------------TC--CSCEEEEECTTT
T ss_pred cCccCccccCccCCCCceEECCCCCEEEEeCCCcCcc--------cccc---------------cc--CCceEEEEeCCC
Confidence 12599999999999999 66542210 0000 01 14589999995
Q ss_pred CcEEEEEECCCCCcccceeEEEE--eCCEEEEeeCC
Q 047259 170 GKIIMDFNDPNATYISFVTSAVE--FEDNLYMASIQ 203 (225)
Q Consensus 170 G~~~~~~~~p~g~~~~~~t~~~~--~~~~Lyv~~~~ 203 (225)
|++...+..|.+. .+++++. ++.+|||+-..
T Consensus 519 Gel~~fl~~P~~a---EpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 519 GEIRRFMVGPIGC---EVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCEEEEEECCTTC---EEEEEEECTTSSEEEEEEES
T ss_pred CeEEEEEeCCCCc---cccCCEECCCCCEEEEEEeC
Confidence 8888777777653 5777776 46899998643
No 151
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.05 E-value=0.00052 Score=55.91 Aligned_cols=82 Identities=12% Similarity=0.095 Sum_probs=55.3
Q ss_pred CcEEEEEeCCCCeEEEEec-CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCC
Q 047259 37 HGQLLKYDPELEETTVLHE-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG 115 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G 115 (225)
.|.|..+|..+++...... .......++++|+++.|+.+ ...+.|..+++... ...... ...+....+++.++|
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~---~~~~~~-~~~~~v~~~~~s~~~ 236 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG-GLDNTVRSWDLREG---RQLQQH-DFTSQIFSLGYCPTG 236 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTT---EEEEEE-ECSSCEEEEEECTTS
T ss_pred CCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEE-ecCCcEEEEECCCC---ceEeee-cCCCceEEEEECCCC
Confidence 5778888887666554443 34567899999999865544 46789999998642 221111 133446789999999
Q ss_pred CEEEEeec
Q 047259 116 SFWVALIK 123 (225)
Q Consensus 116 ~l~v~~~~ 123 (225)
+++++...
T Consensus 237 ~~l~~~~~ 244 (337)
T 1gxr_A 237 EWLAVGME 244 (337)
T ss_dssp SEEEEEET
T ss_pred CEEEEEcC
Confidence 87776654
No 152
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.04 E-value=0.0011 Score=55.09 Aligned_cols=83 Identities=12% Similarity=0.078 Sum_probs=54.5
Q ss_pred CcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCC
Q 047259 37 HGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG 115 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G 115 (225)
.|.|..++..+++..... ........++++||++.| ++-...+.|..+++... .....+. ........+++.++|
T Consensus 143 dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l-asg~~dg~i~iwd~~~~--~~~~~~~-~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 143 VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYL-ASGAIDGIINIFDIATG--KLLHTLE-GHAMPIRSLTFSPDS 218 (321)
T ss_dssp TSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTT--EEEEEEC-CCSSCCCEEEECTTS
T ss_pred CCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEE-EEEcCCCeEEEEECCCC--cEEEEEc-ccCCceeEEEEcCCC
Confidence 677888887666544433 334557889999999955 45556788999998642 1122222 222345789999999
Q ss_pred CEEEEeec
Q 047259 116 SFWVALIK 123 (225)
Q Consensus 116 ~l~v~~~~ 123 (225)
+++++...
T Consensus 219 ~~l~s~s~ 226 (321)
T 3ow8_A 219 QLLVTASD 226 (321)
T ss_dssp CEEEEECT
T ss_pred CEEEEEcC
Confidence 98777655
No 153
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.03 E-value=0.00074 Score=56.72 Aligned_cols=156 Identities=10% Similarity=-0.040 Sum_probs=98.2
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC-------ccccceeEEecCCCEEEE
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG-------FYFANGVALSKDENFVVV 74 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-------~~~pnGi~~~~dg~~Lyv 74 (225)
...+++.++| ++++-.. .|.|..||..+++....... ......++++|+++.|++
T Consensus 189 i~~~~~~~~~-~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~ 250 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFN-----------------NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 250 (397)
T ss_dssp CCEEEECTTS-EEEEECT-----------------TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEE
T ss_pred ceEEEECCCc-eEEEEeC-----------------CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEE
Confidence 3567778888 5555443 67899999876765554444 556789999999985554
Q ss_pred EeCCC---CEEEEEEecCCCCCceeEEecc------------CCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHH
Q 047259 75 CESWK---FRCRRYWLKGPRQGRLESFIEH------------LPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKW 139 (225)
Q Consensus 75 ~~~~~---~~I~~~~~~~~~~~~~~~~~~~------------~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r 139 (225)
+ ... +.|..+++... .....+... .......+++.++|+++++...
T Consensus 251 ~-~~d~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------- 311 (397)
T 1sq9_A 251 A-HDSNSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW---------------- 311 (397)
T ss_dssp E-EEETTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET----------------
T ss_pred E-ecCCCCceEEEEECCCC--cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC----------------
Confidence 4 455 78999998642 122222210 1233467899999988777655
Q ss_pred HHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEE------CC-----CCCc------ccceeEEEEe-CC-----
Q 047259 140 KLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFN------DP-----NATY------ISFVTSAVEF-ED----- 195 (225)
Q Consensus 140 ~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~------~p-----~g~~------~~~~t~~~~~-~~----- 195 (225)
.+.|..+|.. ++.+..+. .. .|.. -..++.+... ++
T Consensus 312 --------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~ 371 (397)
T 1sq9_A 312 --------------------DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGM 371 (397)
T ss_dssp --------------------TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBST
T ss_pred --------------------CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccc
Confidence 4566666654 77777777 21 0000 1235555554 44
Q ss_pred -----EEEEeeCCCCeEEEEeCCC
Q 047259 196 -----NLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 196 -----~Lyv~~~~~~~i~~~~~~~ 214 (225)
.++++....+.|..+++.+
T Consensus 372 ~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 372 GADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccceEEEecCCCcEEEEEcCC
Confidence 5667766778888887654
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.02 E-value=0.00022 Score=65.61 Aligned_cols=104 Identities=19% Similarity=0.139 Sum_probs=66.8
Q ss_pred CCcEEEcCCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCcc----------------------
Q 047259 2 TNDVIEASDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFY---------------------- 58 (225)
Q Consensus 2 pndv~~~~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~---------------------- 58 (225)
++.+++.+||+ |+++..... +.....|+.+|..+++.+.+.....
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~------------~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDS------------DRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIA 106 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSS------------CTTEEEEEEEETTTCCEEEEECGGGTC--------------------
T ss_pred CCCceEecCCCEEEEEeccCC------------CCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhc
Confidence 45789999997 565544200 0113489999988888776654322
Q ss_pred ---ccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEE
Q 047259 59 ---FANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVA 120 (225)
Q Consensus 59 ---~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~ 120 (225)
....++|||||++|+++.. +.|+.++++++.......+.. ..+....+++.+||+..+.
T Consensus 107 ~~~~v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~ 168 (741)
T 2ecf_A 107 AMTGIVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSF 168 (741)
T ss_dssp CCEESCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEE
T ss_pred cccCcceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEE
Confidence 2478999999998887765 799999987530002222221 2234567888888884443
No 155
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.01 E-value=0.00038 Score=58.84 Aligned_cols=158 Identities=8% Similarity=0.010 Sum_probs=101.9
Q ss_pred CcEEEcCC-CcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC-------ccccceeEEecCCCEEEE
Q 047259 3 NDVIEASD-GSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG-------FYFANGVALSKDENFVVV 74 (225)
Q Consensus 3 ndv~~~~d-G~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-------~~~pnGi~~~~dg~~Lyv 74 (225)
..+++.++ +.++++-.. .|.|..+|..+++....... ......++|+|++..+++
T Consensus 169 ~~~~~~~~~~~~l~~~~~-----------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGS-----------------SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp CEEEECSSCTTEEEEESS-----------------SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred eEEEeCCCCCcEEEEEcC-----------------CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 45677777 466666443 67888889876665544433 355789999999855666
Q ss_pred EeCCCC---EEEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhh
Q 047259 75 CESWKF---RCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELIN 150 (225)
Q Consensus 75 ~~~~~~---~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~ 150 (225)
+....+ .|..+++.... .....+..........+++.+ +|+++++...
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~--------------------------- 283 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR--------------------------- 283 (416)
T ss_dssp EEECCSSSCCCCEEETTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEES---------------------------
T ss_pred EEECCCCCceEEEEeCCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeC---------------------------
Confidence 666666 89999986421 111122101223456889998 7887777655
Q ss_pred hhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEe-CC-EEEEeeCCCCeEEEEeCCCcccc
Q 047259 151 LLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEF-ED-NLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 151 ~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~-~~-~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.+.|...|.+ ++.+..+....+. ++.+... ++ .++++....+.|..+++.....+
T Consensus 284 ---------dg~v~~wd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 284 ---------DNTVLLWNPESAEQLSQFPARGNW----CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp ---------SSEEEEECSSSCCEEEEEECSSSC----CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred ---------CCCEEEeeCCCCccceeecCCCCc----eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 4567777764 7777777754432 3444443 34 67777777889999988776543
No 156
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.00 E-value=0.0009 Score=54.63 Aligned_cols=100 Identities=15% Similarity=0.034 Sum_probs=64.3
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
+.+++.++|+..++-.. .|.|..++..+++......+ ......++|+||++.| ++-...+.
T Consensus 27 ~~~~~s~~~~~l~s~~~-----------------dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~ 88 (312)
T 4ery_A 27 SSVKFSPNGEWLASSSA-----------------DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL-VSASDDKT 88 (312)
T ss_dssp EEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE-EEEETTSE
T ss_pred EEEEECCCCCEEEEeeC-----------------CCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEE-EEECCCCE
Confidence 35677777776666443 56777778766666555443 3456889999999854 55556789
Q ss_pred EEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 82 CRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 82 I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
|..++++.. .....+. ........+++.++|+++++...
T Consensus 89 i~vwd~~~~--~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~ 127 (312)
T 4ery_A 89 LKIWDVSSG--KCLKTLK-GHSNYVFCCNFNPQSNLIVSGSF 127 (312)
T ss_dssp EEEEETTTC--CEEEEEE-CCSSCEEEEEECSSSSEEEEEET
T ss_pred EEEEECCCC--cEEEEEc-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 999988642 1122222 22233457788899888777655
No 157
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.0011 Score=54.67 Aligned_cols=137 Identities=12% Similarity=0.061 Sum_probs=82.8
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC----CCEEEEEEecCCC-CCcee--------EEeccCC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW----KFRCRRYWLKGPR-QGRLE--------SFIEHLP 103 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~----~~~I~~~~~~~~~-~~~~~--------~~~~~~~ 103 (225)
.|.|..+|..+++.............++++|+++.|+++... .+.|..+++.... ..... .+. ...
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~ 173 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-THE 173 (369)
T ss_dssp TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-CCT
T ss_pred CCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-CCc
Confidence 678888888777766555555677899999999966665543 2788888886421 11111 111 111
Q ss_pred C--CCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC--CcEEEEEECC
Q 047259 104 G--GPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH--GKIIMDFNDP 179 (225)
Q Consensus 104 g--~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~--G~~~~~~~~p 179 (225)
+ ....++++++|+++++... .+.|..+|.. ++.+..+...
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~------------------------------------dg~i~i~d~~~~~~~~~~~~~~ 217 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGHK------------------------------------DGKISKYDVSNNYEYVDSIDLH 217 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEET------------------------------------TSEEEEEETTTTTEEEEEEECC
T ss_pred CccceeEEEEcCCCCEEEEEcC------------------------------------CCEEEEEECCCCcEeEEEEecC
Confidence 1 3567888888887766544 3456666654 5666666643
Q ss_pred CCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCC
Q 047259 180 NATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 180 ~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+ .++.+... ++.++++....+.|..+++..
T Consensus 218 ~~----~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 218 EK----SISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp SS----CEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CC----ceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 33 24444442 444444445567777777654
No 158
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.96 E-value=0.00077 Score=62.16 Aligned_cols=145 Identities=10% Similarity=-0.069 Sum_probs=82.5
Q ss_pred cEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC---------------CCEEEEEEecCCCCCceeEEecc-
Q 047259 38 GQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW---------------KFRCRRYWLKGPRQGRLESFIEH- 101 (225)
Q Consensus 38 g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~---------------~~~I~~~~~~~~~~~~~~~~~~~- 101 (225)
..|+.+|..+|+............+++|+|||+.||++... ..+|+++++.++......++...
T Consensus 151 ~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~ 230 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD 230 (710)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC
Confidence 37999998888765532222225689999999988877643 23599998865321112222211
Q ss_pred CCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-------Cc-EE
Q 047259 102 LPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-------GK-II 173 (225)
Q Consensus 102 ~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-------G~-~~ 173 (225)
.+....++++++||+..+....... . ....|..+|.+ |+ ..
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~-----------------------------~--~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGC-----------------------------D--PVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSS-----------------------------S--SCCEEEEEEGGGSSSSSCSSCCC
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccC-----------------------------C--CccEEEEEECcccccccCCccce
Confidence 1222347899999984433322100 0 03466666654 32 23
Q ss_pred EEEECCCCCcccceeEEEEeCCEEEEeeCCC---CeEEEEeCCCcc
Q 047259 174 MDFNDPNATYISFVTSAVEFEDNLYMASIQS---KFVGKLPLNTPE 216 (225)
Q Consensus 174 ~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~---~~i~~~~~~~~~ 216 (225)
..+..+.+.. ...+..++++||+.+... .+|.++++.+..
T Consensus 280 ~~l~~~~~~~---~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 280 VKLIDNFEGE---YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp EEEECSSSSC---EEEEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred EEeeCCCCcE---EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 4444433221 222445688888887543 479999887653
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.96 E-value=9e-05 Score=62.39 Aligned_cols=169 Identities=8% Similarity=-0.059 Sum_probs=90.6
Q ss_pred CcEEEcC-CCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCc--cccceeEEecCCCEE-EEEeC
Q 047259 3 NDVIEAS-DGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGF--YFANGVALSKDENFV-VVCES 77 (225)
Q Consensus 3 ndv~~~~-dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~--~~pnGi~~~~dg~~L-yv~~~ 77 (225)
+++++.| ||+ |.++..... .....+|+.+|.++++.+.+.... .....++|+|||+.| |++..
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~------------~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPH------------DLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCT------------TTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred cccEECCCCCCEEEEEEecCC------------CCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecC
Confidence 4677788 775 544433210 112558999998766666655433 234578999999977 55654
Q ss_pred CCC---EEEEEEecCCCCCceeEEeccCCC------CCCceEECCCCCE-EEEeecCCchhhhhhhcChhHHHHHHhhhh
Q 047259 78 WKF---RCRRYWLKGPRQGRLESFIEHLPG------GPDNINLAPDGSF-WVALIKMNQTGVRAIQSCPDKWKLLQAYPE 147 (225)
Q Consensus 78 ~~~---~I~~~~~~~~~~~~~~~~~~~~~g------~Pd~i~~d~~G~l-~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~ 147 (225)
... .|+.++++++ ..+.+.. .++ .++++++.+||+. +++...... +
T Consensus 259 ~~~~~~~l~~~d~~~g---~~~~l~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~----~---------------- 314 (388)
T 3pe7_A 259 KGSPDRFIYSADPETL---ENRQLTS-MPACSHLMSNYDGSLMVGDGSDAPVDVQDDSG----Y---------------- 314 (388)
T ss_dssp TTCCCEEEEEECTTTC---CEEEEEE-ECCEEEEEECTTSSEEEEEECCC------------------------------
T ss_pred CCCCcceEEEEecCCC---ceEEEEc-CCCceeeeecCCCCeEccCCCcceeEeeeccc----c----------------
Confidence 332 4999998753 3333322 222 2667777777763 322211000 0
Q ss_pred hhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCccc--------ceeEEE--EeCCEEEEeeC--CCCeEEEEeCCCc
Q 047259 148 LINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYIS--------FVTSAV--EFEDNLYMASI--QSKFVGKLPLNTP 215 (225)
Q Consensus 148 ~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~--------~~t~~~--~~~~~Lyv~~~--~~~~i~~~~~~~~ 215 (225)
... ....|.++|.++.....+....+. .. ....+. +++.+|++++. +...|++++++..
T Consensus 315 ------~~~--~~~~i~~~d~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 315 ------KIE--NDPFLYVFNMKNGTQHRVARHDTS-WKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPES 385 (388)
T ss_dssp --------C--CCCEEEEEETTTTEEEEEEECCCC-CCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGG
T ss_pred ------ccC--CCCEEEEEeccCCceEEeccccCc-ccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChh
Confidence 001 155788999886544455433331 00 112222 34668888774 4556777777654
Q ss_pred c
Q 047259 216 E 216 (225)
Q Consensus 216 ~ 216 (225)
.
T Consensus 386 ~ 386 (388)
T 3pe7_A 386 V 386 (388)
T ss_dssp G
T ss_pred c
Confidence 3
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.93 E-value=0.0009 Score=61.19 Aligned_cols=97 Identities=14% Similarity=0.051 Sum_probs=63.5
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRC 82 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I 82 (225)
.++++.+|+.+.++. .+.|+.+|..+++...+.........++|+|||+.|+++ ..+.|
T Consensus 85 ~~~~~spd~~~~~~~-------------------~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~--~~~~i 143 (706)
T 2z3z_A 85 FRTLDAGRGLVVLFT-------------------QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV--RNHNL 143 (706)
T ss_dssp EEEEETTTTEEEEEE-------------------TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE--ETTEE
T ss_pred eeEEECCCCeEEEEE-------------------CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE--ECCeE
Confidence 456777776565552 368999998888877776665668899999999988665 34789
Q ss_pred EEEEecCC--CCCceeEEec-cCC-------------CCCCceEECCCCCEEEE
Q 047259 83 RRYWLKGP--RQGRLESFIE-HLP-------------GGPDNINLAPDGSFWVA 120 (225)
Q Consensus 83 ~~~~~~~~--~~~~~~~~~~-~~~-------------g~Pd~i~~d~~G~l~v~ 120 (225)
+.+++++. ..+....... ... +.+.++++.+||+..+.
T Consensus 144 ~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 144 YIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp EEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred EEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEE
Confidence 99998650 0012211111 111 11478999999984443
No 161
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.92 E-value=0.00036 Score=64.14 Aligned_cols=135 Identities=16% Similarity=0.137 Sum_probs=81.7
Q ss_pred cEEEEEeCCC-CeEEEEe---cCccccceeEEecCCCEEEEEeC----CCCEEEEEEecCCCCCceeEEec-cCCC---C
Q 047259 38 GQLLKYDPEL-EETTVLH---EGFYFANGVALSKDENFVVVCES----WKFRCRRYWLKGPRQGRLESFIE-HLPG---G 105 (225)
Q Consensus 38 g~v~~~d~~~-~~~~~~~---~~~~~pnGi~~~~dg~~Lyv~~~----~~~~I~~~~~~~~~~~~~~~~~~-~~~g---~ 105 (225)
..|+.+|..+ ++...+. ........++| |||+.|+++.. ....|+.++++++ ....... ...+ .
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN---QQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC---CEEEEEEEECSSCCCC
T ss_pred eEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC---ceEEEEEcCCCCcCCc
Confidence 3789999887 7765554 23456788999 99998887654 3457888887653 2322222 1211 2
Q ss_pred CCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCccc
Q 047259 106 PDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYIS 185 (225)
Q Consensus 106 Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~ 185 (225)
...+++.+||+++++.... ....|+.++.+|+ ...+......
T Consensus 339 ~~~~~~spdg~~~~~~~~~----------------------------------g~~~l~~~~~~~~-~~~l~~~~~~--- 380 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERT----------------------------------GFQHLYRIDSKGK-AAALTHGNWS--- 380 (741)
T ss_dssp CSCCEECTTSCEEEEECTT----------------------------------SSCEEEEECSSSC-EEESCCSSSC---
T ss_pred CCceEECCCCeEEEEecCC----------------------------------CccEEEEEcCCCC-eeeeeecceE---
Confidence 3589999999966554331 1357888888777 5555432222
Q ss_pred ceeEE---EEeCCEEEEeeCCC----CeEEEEeCCCc
Q 047259 186 FVTSA---VEFEDNLYMASIQS----KFVGKLPLNTP 215 (225)
Q Consensus 186 ~~t~~---~~~~~~Lyv~~~~~----~~i~~~~~~~~ 215 (225)
...+ .++++.||++.... .+|+.++.++.
T Consensus 381 -v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 381 -VDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG 416 (741)
T ss_dssp -EEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC
T ss_pred -EEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC
Confidence 2222 22356777766543 35777776554
No 162
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.90 E-value=0.00084 Score=57.01 Aligned_cols=139 Identities=11% Similarity=0.077 Sum_probs=86.0
Q ss_pred CcEEEEEeCCCCe--------EEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEe-ccCCCCCC
Q 047259 37 HGQLLKYDPELEE--------TTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFI-EHLPGGPD 107 (225)
Q Consensus 37 ~g~v~~~d~~~~~--------~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~-~~~~g~Pd 107 (225)
.|.|..||..++. +..+.........++|+|+++.++++-..++.|..+++... .....+. ....+...
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~ 180 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--AAVLTLGPDVHPDTIY 180 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT--EEEEEECTTTCCSCEE
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--CccEEEecCCCCCceE
Confidence 5677777765542 22333344567899999998546667677789999998642 1122221 12233456
Q ss_pred ceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEE-ECCCCCccc
Q 047259 108 NINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDF-NDPNATYIS 185 (225)
Q Consensus 108 ~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~-~~p~g~~~~ 185 (225)
.+++.++|+++++... .+.|..+|.. ++.+..+ ....+.
T Consensus 181 ~~~~~~~~~~l~~~~~------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~--- 221 (402)
T 2aq5_A 181 SVDWSRDGALICTSCR------------------------------------DKRVRVIEPRKGTVVAEKDRPHEGT--- 221 (402)
T ss_dssp EEEECTTSSCEEEEET------------------------------------TSEEEEEETTTTEEEEEEECSSCSS---
T ss_pred EEEECCCCCEEEEEec------------------------------------CCcEEEEeCCCCceeeeeccCCCCC---
Confidence 8899999987776655 4567777764 6777666 332222
Q ss_pred ceeEEEE-eCCEEEEee---CCCCeEEEEeCCCcc
Q 047259 186 FVTSAVE-FEDNLYMAS---IQSKFVGKLPLNTPE 216 (225)
Q Consensus 186 ~~t~~~~-~~~~Lyv~~---~~~~~i~~~~~~~~~ 216 (225)
.++.+.. .++.++++. .....|..+++....
T Consensus 222 ~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 222 RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred cceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 1333433 356666665 567888888877643
No 163
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.88 E-value=0.0019 Score=54.75 Aligned_cols=141 Identities=10% Similarity=0.017 Sum_probs=87.3
Q ss_pred CcEEEEEeCCCCeEEEEe--c-CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEE-eccCCCCCCceEEC
Q 047259 37 HGQLLKYDPELEETTVLH--E-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESF-IEHLPGGPDNINLA 112 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~--~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~-~~~~~g~Pd~i~~d 112 (225)
.|.|..+|..+++..... . .......++|+||++.|+ +-...+.|..+++... .....+ ..+....+..+++.
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~ 229 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC-TSCRDKRVRVIEPRKG--TVVAEKDRPHEGTRPVHAVFV 229 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE-EEETTSEEEEEETTTT--EEEEEEECSSCSSSCCEEEEC
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE-EEecCCcEEEEeCCCC--ceeeeeccCCCCCcceEEEEc
Confidence 678888898777665544 2 344568999999998554 4456789999998642 122222 11122236789999
Q ss_pred CCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-Cc-EEEEEECCCCCcccceeEE
Q 047259 113 PDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GK-IIMDFNDPNATYISFVTSA 190 (225)
Q Consensus 113 ~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~-~~~~~~~p~g~~~~~~t~~ 190 (225)
++|+++++.+... . .+.|..+|.. ++ .+......... .+..+
T Consensus 230 ~~~~~l~~g~~~~-------------------------------~--d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~ 273 (402)
T 2aq5_A 230 SEGKILTTGFSRM-------------------------------S--ERQVALWDTKHLEEPLSLQELDTSS---GVLLP 273 (402)
T ss_dssp STTEEEEEEECTT-------------------------------C--CEEEEEEETTBCSSCSEEEECCCCS---SCEEE
T ss_pred CCCcEEEEeccCC-------------------------------C--CceEEEEcCccccCCceEEeccCCC---ceeEE
Confidence 9999887764310 0 4667777764 33 23344332211 23444
Q ss_pred EE--eCCEEEEeeCCCCeEEEEeCCCcc
Q 047259 191 VE--FEDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 191 ~~--~~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
.. ++..|+++....+.|..+++....
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 43 356787887778888888887654
No 164
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.84 E-value=0.00088 Score=56.43 Aligned_cols=85 Identities=14% Similarity=-0.006 Sum_probs=54.5
Q ss_pred CcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCC-CCCCceEECCC
Q 047259 37 HGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLP-GGPDNINLAPD 114 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~-g~Pd~i~~d~~ 114 (225)
.|.|..+|..+++......+ ....+.+++++++..++++-+..+.|..+++... .....+..... ..+..+++.++
T Consensus 148 d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~p~ 225 (344)
T 4gqb_B 148 DICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP--KPASQIGCSAPGYLPTSLAWHPQ 225 (344)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS--SCEEECC----CCCEEEEEECSS
T ss_pred CCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc--ceeeeeecceeeccceeeeecCC
Confidence 67788888877776555443 4456889999999778888888899999998642 11122211111 23456788875
Q ss_pred -CCEEEEeec
Q 047259 115 -GSFWVALIK 123 (225)
Q Consensus 115 -G~l~v~~~~ 123 (225)
++++++...
T Consensus 226 ~~~~l~sg~~ 235 (344)
T 4gqb_B 226 QSEVFVFGDE 235 (344)
T ss_dssp CTTEEEEEET
T ss_pred CCcceEEecc
Confidence 456665544
No 165
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.84 E-value=0.00035 Score=63.58 Aligned_cols=119 Identities=13% Similarity=0.096 Sum_probs=77.8
Q ss_pred CccccceeEEecCCCEEEEEeCC---------------------CCEEEEEEecCCC----CCceeEEecc---------
Q 047259 56 GFYFANGVALSKDENFVVVCESW---------------------KFRCRRYWLKGPR----QGRLESFIEH--------- 101 (225)
Q Consensus 56 ~~~~pnGi~~~~dg~~Lyv~~~~---------------------~~~I~~~~~~~~~----~~~~~~~~~~--------- 101 (225)
.+..|.||.++|..+.+|++.+. .++|+|+.+++.. ....++|+-.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 34578999999855569999774 2589999986421 1123333310
Q ss_pred ------------CCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC
Q 047259 102 ------------LPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH 169 (225)
Q Consensus 102 ------------~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~ 169 (225)
.-..||||++|++|+||++.=+.....-.+. ... ...++..+++
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~----------------------~~g--nn~~~~~~~~ 517 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFA----------------------GMG--NNQMLCADPA 517 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGT----------------------TTC--SCEEEEECTT
T ss_pred ccccccccCCCCCccCCcceEECCCCCEEEEecCCCccccccc----------------------ccc--cceEEEEeCC
Confidence 0125999999999999999755321110000 011 4577888886
Q ss_pred -CcEEEEEECCCCCcccceeEEEEe--CCEEEEee
Q 047259 170 -GKIIMDFNDPNATYISFVTSAVEF--EDNLYMAS 201 (225)
Q Consensus 170 -G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~ 201 (225)
|++...+..|.|. .+|++++. +.+|||.-
T Consensus 518 ~g~~~rf~~~P~ga---E~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 518 TGEIRRFMVGPIGC---EVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TCCEEEEEECCTTC---EEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEeCCCCc---cCcCeeECCCCCEEEEEE
Confidence 8988888888775 57777763 57898874
No 166
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.84 E-value=0.001 Score=55.94 Aligned_cols=151 Identities=13% Similarity=0.043 Sum_probs=97.1
Q ss_pred CcEEEcCCC-cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec---CccccceeEEec-CCCEEEEEeC
Q 047259 3 NDVIEASDG-SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE---GFYFANGVALSK-DENFVVVCES 77 (225)
Q Consensus 3 ndv~~~~dG-~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~---~~~~pnGi~~~~-dg~~Lyv~~~ 77 (225)
+.+++.++| +++++-.. .|.|..||..+++...... .......++|+| +++ ++++-+
T Consensus 77 ~~~~~~~~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~ 138 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAVGSK-----------------GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTN-QLFVSS 138 (383)
T ss_dssp EEEEECSSCTTEEEEEEB-----------------TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEE-EEEEEE
T ss_pred EEEEECCCCCCEEEEEcC-----------------CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCC-EEEEEe
Confidence 356777777 66666443 5778888876665555443 345668999999 555 556666
Q ss_pred CCCEEEEEEecCCCCCceeEEeccC--CCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccC
Q 047259 78 WKFRCRRYWLKGPRQGRLESFIEHL--PGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPL 155 (225)
Q Consensus 78 ~~~~I~~~~~~~~~~~~~~~~~~~~--~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 155 (225)
..+.|..+++.+. ....+.... ......+++.++|++.++...
T Consensus 139 ~d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------------------------- 183 (383)
T 3ei3_B 139 IRGATTLRDFSGS---VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS-------------------------------- 183 (383)
T ss_dssp TTTEEEEEETTSC---EEEEEECCCCSSCCEEEEEEETTTTEEEEEET--------------------------------
T ss_pred CCCEEEEEECCCC---ceEEEeccCCCCCCeEEEEECCCCCEEEEECC--------------------------------
Confidence 7789999998742 333333211 133567899999997776655
Q ss_pred CCCcceEEEEECCCCcEEEEEECCCCCcccceeEEEEe-CCE-EEEeeCCCCeEEEEeCCC
Q 047259 156 GNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVEF-EDN-LYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 156 ~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~~-~~~-Lyv~~~~~~~i~~~~~~~ 214 (225)
.+.|..+|.+++.+..+....+ .++.+... ++. ++++....+.|..+++..
T Consensus 184 ----d~~i~i~d~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 184 ----TGRLLLLGLDGHEIFKEKLHKA----KVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp ----TSEEEEEETTSCEEEEEECSSS----CEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred ----CCCEEEEECCCCEEEEeccCCC----cEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 4577777778887777765433 24445443 333 556656667788777765
No 167
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.81 E-value=7.8e-05 Score=64.12 Aligned_cols=93 Identities=9% Similarity=0.015 Sum_probs=64.7
Q ss_pred EEEcCCC-cEEEEcC---CCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeC-CC
Q 047259 5 VIEASDG-SLYFTVS---SKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCES-WK 79 (225)
Q Consensus 5 v~~~~dG-~iy~td~---~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~-~~ 79 (225)
+++++|| ++|++.. +... .. .+.+..+|..++++...+.....|+||++++||++||++.. ..
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~-----------~~-~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~ 336 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCL-----------AA-AENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGT 336 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTT-----------SC-EEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTT
T ss_pred eEEcCCCCEEEEEeccccCccc-----------cc-CCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCC
Confidence 7788887 6888754 2000 00 23456999887776554444558999999999998999988 69
Q ss_pred CEEEEEEecCCCCCceeEEec-cCCCCCCceEECCC
Q 047259 80 FRCRRYWLKGPRQGRLESFIE-HLPGGPDNINLAPD 114 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~-~~~g~Pd~i~~d~~ 114 (225)
+.|..+|+.+. ++... ..+..|.+|++..+
T Consensus 337 ~~VsVID~~t~-----kvv~~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 337 EVLDIYDAASD-----QDQSSVELDKGPESLSVQNE 367 (368)
T ss_dssp TEEEEEESSSC-----EEEEECCCCSCCCEEECCCC
T ss_pred CeEEEEECCCC-----cEEEEEECCCCCCEEEeecC
Confidence 99999998642 22221 14567999998754
No 168
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.80 E-value=0.0032 Score=52.05 Aligned_cols=101 Identities=15% Similarity=0.131 Sum_probs=65.7
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCe---EEEEecCccccceeEEecCCCEEEEEeCCC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEE---TTVLHEGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~---~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
..+++.++|++.++-.. .|.|..||..+++ +..+.........++++|+++.|+.+ ...
T Consensus 12 ~~~~~s~~~~~l~~~~~-----------------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~d 73 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICPN-----------------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC-GTD 73 (372)
T ss_dssp CEEEECTTSSEEEEECS-----------------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEE-ETT
T ss_pred EEEEECCCCCEEEEEeC-----------------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEE-cCC
Confidence 56888899987777543 5678888876664 23333444567899999999855544 466
Q ss_pred CEEEEEEecCCCCCceeEEe-ccCCCCCCceEECCCCCEEEEeec
Q 047259 80 FRCRRYWLKGPRQGRLESFI-EHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~-~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
+.|..++++... ....+. .........+++.++|+++++...
T Consensus 74 g~i~vwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 116 (372)
T 1k8k_C 74 RNAYVWTLKGRT--WKPTLVILRINRAARCVRWAPNEKKFAVGSG 116 (372)
T ss_dssp SCEEEEEEETTE--EEEEEECCCCSSCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEECCCCe--eeeeEEeecCCCceeEEEECCCCCEEEEEeC
Confidence 788889886421 111111 112334568899999987776654
No 169
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.78 E-value=0.00044 Score=64.32 Aligned_cols=145 Identities=17% Similarity=0.148 Sum_probs=85.8
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC----ccccceeEEecCCCEEEEEeCC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG----FYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~----~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
+.+..+++|+||+.-.. .+.|+++|+++++++..... ...++.|..+.+|+ ||++..
T Consensus 475 ~~i~~d~~g~lWi~~~t-----------------~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-lWigt~- 535 (758)
T 3ott_A 475 NQIIPDNEGNVWVLLYN-----------------NKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGL-LWVGFH- 535 (758)
T ss_dssp EEEEECTTSCEEEEETT-----------------CSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSC-EEEEET-
T ss_pred eeEEEcCCCCEEEEccC-----------------CCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCC-EEEEec-
Confidence 35778888999982111 12478999887777765321 23567899998887 998864
Q ss_pred CCEEEEEEecCCCCCceeEEe-ccCCC-CCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCC
Q 047259 79 KFRCRRYWLKGPRQGRLESFI-EHLPG-GPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLG 156 (225)
Q Consensus 79 ~~~I~~~~~~~~~~~~~~~~~-~~~~g-~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 156 (225)
+-|.+|++++.. .+.+. +.++. ...+|..+ +|+||++...
T Consensus 536 -~Gl~~~~~~~~~---~~~~~~~gl~~~~i~~i~~~-~g~lWi~t~~--------------------------------- 577 (758)
T 3ott_A 536 -GGVMRINPKDES---QQSISFGSFSNNEILSMTCV-KNSIWVSTTN--------------------------------- 577 (758)
T ss_dssp -TEEEEECC--CC---CCBCCCCC---CCEEEEEEE-TTEEEEEESS---------------------------------
T ss_pred -CceEEEecCCCc---eEEecccCCCccceEEEEEC-CCCEEEECCC---------------------------------
Confidence 469999986531 21221 11221 23456555 8999998743
Q ss_pred CCcceEEEEECCCCcEEEEEECCCCCcccceeEEEE-eCCEEEEeeCCCCeEEEEeCCC
Q 047259 157 NDAGARIVKVDTHGKIIMDFNDPNATYISFVTSAVE-FEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 157 ~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~~~-~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+.++|++......+..++.. +. ..+.. .+|.||+++. +-+.+|....
T Consensus 578 -----Gl~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~G~l~fG~~--~Gl~~f~p~~ 626 (758)
T 3ott_A 578 -----GLWIIDRKTMDARQQNMTNKR-FT--SLLFDPKEDCVYLGGA--DGFGISHSNL 626 (758)
T ss_dssp -----CEEEEETTTCCEEEC--CCCC-CS--EEEEETTTTEEEEECB--SEEEEEEC--
T ss_pred -----CeEEEcCCCceeEEecCCCCc-ee--eeEEECCCCcEEEecC--CceEEEChhh
Confidence 378888875444455555443 32 22233 4799999974 3566666554
No 170
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.78 E-value=0.00068 Score=58.72 Aligned_cols=102 Identities=15% Similarity=0.128 Sum_probs=62.8
Q ss_pred CcEEEcCCCcE-EEEcCCCCCCcchhhhhcccCCCCcEEEEEeCC--CCeEEEEe---cCccccceeEEecCCCEEEEEe
Q 047259 3 NDVIEASDGSL-YFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPE--LEETTVLH---EGFYFANGVALSKDENFVVVCE 76 (225)
Q Consensus 3 ndv~~~~dG~i-y~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~--~~~~~~~~---~~~~~pnGi~~~~dg~~Lyv~~ 76 (225)
..+++.++|+. +++-.. .|.|..||.. +++..... .....+..++|+||++.|+++.
T Consensus 106 ~~~~~s~d~~~l~~~~~~-----------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 168 (450)
T 2vdu_B 106 RNLRLTSDESRLIACADS-----------------DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIAD 168 (450)
T ss_dssp EEEEECTTSSEEEEEEGG-----------------GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEECC-----------------CCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEe
Confidence 46788888875 466443 4566666654 45443333 2235678999999999777775
Q ss_pred CCCCEEEEEEecCCCCC--ceeEEeccCCCCCCceEECCC---CCEEEEeec
Q 047259 77 SWKFRCRRYWLKGPRQG--RLESFIEHLPGGPDNINLAPD---GSFWVALIK 123 (225)
Q Consensus 77 ~~~~~I~~~~~~~~~~~--~~~~~~~~~~g~Pd~i~~d~~---G~l~v~~~~ 123 (225)
. .+.|+.+++...... ....+.. ..+....+++.++ |+++++...
T Consensus 169 ~-~g~v~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~ 218 (450)
T 2vdu_B 169 K-FGDVYSIDINSIPEEKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITSDR 218 (450)
T ss_dssp T-TSEEEEEETTSCCCSSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEET
T ss_pred C-CCcEEEEecCCcccccccceeeec-ccCceEEEEEcCCCCCCcEEEEEcC
Confidence 4 678999988643211 1112221 2234567889988 776666544
No 171
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.76 E-value=0.0028 Score=54.63 Aligned_cols=86 Identities=15% Similarity=0.035 Sum_probs=58.6
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCC--eEEEEe-------cCccccceeEEe---cC-
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELE--ETTVLH-------EGFYFANGVALS---KD- 68 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--~~~~~~-------~~~~~pnGi~~~---~d- 68 (225)
..++.++++|+||+-|++..-....... ....+.-.|+.+|..++ ++.... ....+-|.|+++ ++
T Consensus 89 V~~v~iD~~~rLWVLDtG~~~~~~~~~~--~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 89 IYQPVIDDCRRLWVVDIGSVEYRSRGAK--DYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp EEEEEECTTCEEEEEECSSCSSCSTTGG--GSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred eeEEEEcCCCcEEEEeCCCcCcCCCccc--cCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 3578999999999999984211000000 00034568999999887 654321 123567899999 32
Q ss_pred ---CCEEEEEeCCCCEEEEEEecC
Q 047259 69 ---ENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 69 ---g~~Lyv~~~~~~~I~~~~~~~ 89 (225)
+.++||+|++.+.|..|++..
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~ 190 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKK 190 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTT
T ss_pred CCCccEEEEEcCCCCcEEEEECCC
Confidence 568999999999999999874
No 172
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.73 E-value=0.0011 Score=55.02 Aligned_cols=86 Identities=7% Similarity=-0.095 Sum_probs=52.3
Q ss_pred CcEEEEEeCCCCeEEEE---ecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCC-ceeEEeccCCCCCCceEEC
Q 047259 37 HGQLLKYDPELEETTVL---HEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQG-RLESFIEHLPGGPDNINLA 112 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~---~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~-~~~~~~~~~~g~Pd~i~~d 112 (225)
.|.|..||..+++.... .........++++|+++.|+++. ..+.|..++++..... ....+..........+++.
T Consensus 73 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 73 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred CCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence 56676777655654333 23345678999999998665554 5578888887642110 0112211123345788999
Q ss_pred CCCCEEEEeec
Q 047259 113 PDGSFWVALIK 123 (225)
Q Consensus 113 ~~G~l~v~~~~ 123 (225)
++|+++++...
T Consensus 152 ~~~~~l~~~~~ 162 (372)
T 1k8k_C 152 PNSVLLAAGSC 162 (372)
T ss_dssp TTSSEEEEEET
T ss_pred CCCCEEEEEcC
Confidence 99987776654
No 173
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.73 E-value=0.0036 Score=52.94 Aligned_cols=84 Identities=8% Similarity=0.084 Sum_probs=56.8
Q ss_pred CCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 36 PHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
..|.|..||..+++..... ........++|+|+++.| ++-+..+.|..+++... .....+. ...+....+++.++
T Consensus 117 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~--~~~~~~~-~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 117 TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEAL-ISSSQDMQLKIWSVKDG--SNPRTLI-GHRATVTDIAIIDR 192 (420)
T ss_dssp TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTC--CCCEEEE-CCSSCEEEEEEETT
T ss_pred CCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEE-EEEeCCCeEEEEeCCCC--cCceEEc-CCCCcEEEEEEcCC
Confidence 4677888888766665554 344567899999999845 55566789999998642 1223332 22334568899999
Q ss_pred CCEEEEeec
Q 047259 115 GSFWVALIK 123 (225)
Q Consensus 115 G~l~v~~~~ 123 (225)
|+++++...
T Consensus 193 ~~~l~s~~~ 201 (420)
T 3vl1_A 193 GRNVLSASL 201 (420)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEEcC
Confidence 987776554
No 174
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.72 E-value=0.0018 Score=55.60 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=90.5
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEE
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRC 82 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I 82 (225)
.+++.|++.+.+|-+. .|.|..||..+++......+ ......++|+|+++ ++++-+.++.|
T Consensus 113 ~~~~~p~~~~l~s~s~-----------------Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i 174 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASE-----------------DATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTI 174 (410)
T ss_dssp EEEECSSSSEEEEEES-----------------SSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-EEEEEETTSCC
T ss_pred EEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-EEEEEeCCCeE
Confidence 4666777776666443 67888888877765554443 34568999999998 55666677888
Q ss_pred EEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceE
Q 047259 83 RRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGAR 162 (225)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~ 162 (225)
..+++.+. .....+. ........+++.++|++.++... .+.
T Consensus 175 ~iwd~~~~--~~~~~~~-~h~~~V~~v~~~p~~~~l~s~s~------------------------------------D~~ 215 (410)
T 1vyh_C 175 KLWDFQGF--ECIRTMH-GHDHNVSSVSIMPNGDHIVSASR------------------------------------DKT 215 (410)
T ss_dssp CEEETTSS--CEEECCC-CCSSCEEEEEECSSSSEEEEEET------------------------------------TSE
T ss_pred EEEeCCCC--ceeEEEc-CCCCCEEEEEEeCCCCEEEEEeC------------------------------------CCe
Confidence 88887642 1112221 12223467889999987776655 344
Q ss_pred EEEECC-CCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCC
Q 047259 163 IVKVDT-HGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 163 V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
|...|. .|+.+..+..... .+..+... ++.++++....+.|..+++..
T Consensus 216 i~~wd~~~~~~~~~~~~h~~----~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 216 IKMWEVQTGYCVKTFTGHRE----WVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp EEEEETTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEECCCCcEEEEEeCCCc----cEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 555554 3666666654322 23333332 455555555556666666544
No 175
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.0042 Score=51.01 Aligned_cols=148 Identities=11% Similarity=0.003 Sum_probs=87.1
Q ss_pred CcEEEEEeCCC-CeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 37 HGQLLKYDPEL-EETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 37 ~g~v~~~d~~~-~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
.|.|..||..+ ++..... ........++++|+++.|+.+ +..+.|..+++... .....+. .......+++.++
T Consensus 196 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~--~~~~~~~--~~~~~~~~~~~~~ 270 (369)
T 3zwl_B 196 DGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITS-SRDTNSFLVDVSTL--QVLKKYE--TDCPLNTAVITPL 270 (369)
T ss_dssp TSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTC--CEEEEEE--CSSCEEEEEECSS
T ss_pred CCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEe-cCCceEEEEECCCC--ceeeeec--CCCCceeEEecCC
Confidence 67899999875 3433333 344567899999999866544 56689999998642 1122222 2334568999999
Q ss_pred CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEe
Q 047259 115 GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEF 193 (225)
Q Consensus 115 G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~ 193 (225)
|.+.++............ ........+..+|.. ++.+..+....+ .++.+...
T Consensus 271 ~~~l~~~~~~~~~~~~~~----------------------~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~v~~~~~s 324 (369)
T 3zwl_B 271 KEFIILGGGQEAKDVTTT----------------------SANEGKFEARFYHKIFEEEIGRVQGHFG----PLNTVAIS 324 (369)
T ss_dssp SSEEEEEECCC-----------------------------------CEEEEEETTTCCEEEEEECCSS----CEEEEEEC
T ss_pred CceEEEeecCCCceEEEE----------------------ecCCCcceeEEEecCCCcchhheecccC----cEEEEEEC
Confidence 987766655321100000 000012356666654 777777765443 35555553
Q ss_pred -CCEEEEeeCCCCeEEEEeCCCc
Q 047259 194 -EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 194 -~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
+++++++....+.|..+++...
T Consensus 325 ~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 325 PQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp TTSSEEEEEETTSEEEEEEECHH
T ss_pred CCCCEEEEEcCCCeEEEEECccc
Confidence 5666666667788888887653
No 176
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.00084 Score=56.46 Aligned_cols=82 Identities=15% Similarity=-0.020 Sum_probs=52.4
Q ss_pred CcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCC
Q 047259 37 HGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG 115 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G 115 (225)
.|.|..+|..+++..... ........++++|++ ++++....+.|..+++... .....+. ........+++.++|
T Consensus 268 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~--~~~~~~~-~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 268 DGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQN--TLLALSI-VDGVPIFAGRISQDG 342 (425)
T ss_dssp TSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTT--EEEEEEE-CTTCCEEEEEECTTS
T ss_pred CCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCC--cEeEecc-cCCccEEEEEEcCCC
Confidence 567777776554433333 234556899999998 5556667789999998642 1122222 123345688999999
Q ss_pred CEEEEeec
Q 047259 116 SFWVALIK 123 (225)
Q Consensus 116 ~l~v~~~~ 123 (225)
+++++...
T Consensus 343 ~~l~~~~~ 350 (425)
T 1r5m_A 343 QKYAVAFM 350 (425)
T ss_dssp SEEEEEET
T ss_pred CEEEEEEC
Confidence 87776654
No 177
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.71 E-value=0.002 Score=54.53 Aligned_cols=136 Identities=7% Similarity=-0.005 Sum_probs=82.5
Q ss_pred CcEEEEEeCCCCeEEEEecC-------------------------ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCC
Q 047259 37 HGQLLKYDPELEETTVLHEG-------------------------FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPR 91 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~-------------------------~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~ 91 (225)
.|.|..||..+++....... ......++|+|+++.| ++-...+.|..+++...
T Consensus 202 d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~- 279 (420)
T 3vl1_A 202 DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV-IAGHVSGVITVHNVFSK- 279 (420)
T ss_dssp TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEE-EEEETTSCEEEEETTTC-
T ss_pred CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEE-EEEcCCCeEEEEECCCC-
Confidence 56777788766655443322 1234567889999855 45556788999998642
Q ss_pred CCceeEEeccCCCCCCceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-
Q 047259 92 QGRLESFIEHLPGGPDNINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH- 169 (225)
Q Consensus 92 ~~~~~~~~~~~~g~Pd~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~- 169 (225)
.....+..........+++.++|. ++++... .+.|...|..
T Consensus 280 -~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~------------------------------------dg~i~vwd~~~ 322 (420)
T 3vl1_A 280 -EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE------------------------------------NGMLAQWDLRS 322 (420)
T ss_dssp -CEEEEECCTTSSCEEEEEECSSCTTEEEEEET------------------------------------TSEEEEEETTC
T ss_pred -ceeEEcccccCCCceeEEEeCCCCCEEEEEeC------------------------------------CCeEEEEEcCC
Confidence 112222211223456899999998 6666554 3456666654
Q ss_pred C-cEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 047259 170 G-KIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 170 G-~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
+ +.+..+....+. .++.+...++.++++....+.|...++..
T Consensus 323 ~~~~~~~~~~~~~~---~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 323 PECPVGEFLINEGT---PINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp TTSCSEEEEESTTS---CEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred CcCchhhhhccCCC---CceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 3 445555542222 34455556777878877788888888765
No 178
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.71 E-value=0.0027 Score=52.84 Aligned_cols=130 Identities=11% Similarity=0.043 Sum_probs=78.5
Q ss_pred CcEEEEEeCCCCeEEEEec-CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEecc-CCCCCCceEECCC
Q 047259 37 HGQLLKYDPELEETTVLHE-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEH-LPGGPDNINLAPD 114 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~-~~g~Pd~i~~d~~ 114 (225)
.|.|..||..+++...... .....+.++++|+++ ++++-+..+.|..+++... .....+... .......+++.++
T Consensus 205 d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRAD--QELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEECTT
T ss_pred CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCC--cEEEEEccCCcccceEEEEECCC
Confidence 6778888877666544443 345578999999998 5556667789999988642 111222110 1112356889999
Q ss_pred CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEEe
Q 047259 115 GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVEF 193 (225)
Q Consensus 115 G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~~ 193 (225)
|++.++... .+.|...|. .++.+..+....+ .++.+...
T Consensus 282 g~~l~~g~~------------------------------------d~~i~vwd~~~~~~~~~~~~h~~----~v~~~~~s 321 (340)
T 1got_B 282 GRLLLAGYD------------------------------------DFNCNVWDALKADRAGVLAGHDN----RVSCLGVT 321 (340)
T ss_dssp SSEEEEEET------------------------------------TSEEEEEETTTCCEEEEEECCSS----CEEEEEEC
T ss_pred CCEEEEECC------------------------------------CCeEEEEEcccCcEeeEeecCCC----cEEEEEEc
Confidence 998887766 456666665 4666666664333 24444443
Q ss_pred -CCEEEEeeCCCCeEEE
Q 047259 194 -EDNLYMASIQSKFVGK 209 (225)
Q Consensus 194 -~~~Lyv~~~~~~~i~~ 209 (225)
++.+.++....+.|..
T Consensus 322 ~dg~~l~s~s~D~~i~i 338 (340)
T 1got_B 322 DDGMAVATGSWDSFLKI 338 (340)
T ss_dssp TTSSCEEEEETTSCEEE
T ss_pred CCCCEEEEEcCCccEEe
Confidence 4444444444454443
No 179
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.70 E-value=0.00023 Score=63.86 Aligned_cols=73 Identities=11% Similarity=-0.026 Sum_probs=47.6
Q ss_pred EEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC---CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCE
Q 047259 41 LKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW---KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSF 117 (225)
Q Consensus 41 ~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~---~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l 117 (225)
..||.++++.+.+..... +.+++||||++|+.+... ...|++++++++ ..+.+.. ..+....+++.+||+.
T Consensus 135 ~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g---~~~~l~~-~~~~~~~~~~SpDG~~ 208 (582)
T 3o4h_A 135 ALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG---GLRVFDS-GEGSFSSASISPGMKV 208 (582)
T ss_dssp EEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC---CCEEECC-SSCEEEEEEECTTSCE
T ss_pred eEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC---CceEeec-CCCccccceECCCCCE
Confidence 355666677766654333 889999999988755432 257889988653 3444432 2334468899999986
Q ss_pred EE
Q 047259 118 WV 119 (225)
Q Consensus 118 ~v 119 (225)
.+
T Consensus 209 l~ 210 (582)
T 3o4h_A 209 TA 210 (582)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 180
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.68 E-value=0.0047 Score=52.16 Aligned_cols=157 Identities=11% Similarity=0.056 Sum_probs=89.9
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe---cCccccceeEEecCCCEEEEEeCCC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH---EGFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~---~~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
++|++.|||++.++-+. +.+..++..+++..... ......+.++|+||++.+..+....
T Consensus 180 ~~v~fspdg~~l~s~s~------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 180 KDLHFSTDGKVVAYITG------------------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp CEEEECTTSSEEEEECS------------------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred EEEEEccCCceEEeccc------------------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 45666677765555332 23445554444433221 1223457899999998666554332
Q ss_pred C---EEEEEEecCCCCCc--eeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhcc
Q 047259 80 F---RCRRYWLKGPRQGR--LESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIP 154 (225)
Q Consensus 80 ~---~I~~~~~~~~~~~~--~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~ 154 (225)
. .|+.++........ ...+. ........+++.++|++.++...
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~~lasgs~------------------------------- 289 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGELAVLASN------------------------------- 289 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSCEEEEEET-------------------------------
T ss_pred cceeEEeecccccceecceeeeeec-CCCCCeEeEEECCCCCceEEEcC-------------------------------
Confidence 2 45666654321000 11111 11122357899999998877655
Q ss_pred CCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCCccc
Q 047259 155 LGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNTPEA 217 (225)
Q Consensus 155 ~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~~~~ 217 (225)
.+.|...|. +|+.+..+.. |. -..++.+++. ++++.++....+.|.+++++..-+
T Consensus 290 -----D~~V~iwd~~~~~~~~~~~~--gH-~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 290 -----DNSIALVKLKDLSMSKIFKQ--AH-SFAITEVTISPDSTYVASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp -----TSCEEEEETTTTEEEEEETT--SS-SSCEEEEEECTTSCEEEEEETTSEEEEEECCTTTT
T ss_pred -----CCEEEEEECCCCcEEEEecC--cc-cCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 345666665 4777766532 21 1246667664 678878888889999999875433
No 181
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.68 E-value=0.0059 Score=49.85 Aligned_cols=100 Identities=12% Similarity=0.085 Sum_probs=67.4
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
+.+++.|+|.+.+|-.. .|.|..+|..+++....... ....+.++++|+++.| ++-+..+.
T Consensus 17 ~~~~fsp~~~~l~s~~~-----------------dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~d~~ 78 (304)
T 2ynn_A 17 KGIDFHPTEPWVLTTLY-----------------SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWI-IVGSDDFR 78 (304)
T ss_dssp EEEEECSSSSEEEEEET-----------------TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEE-EEEETTSE
T ss_pred EEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEE-EEECCCCE
Confidence 46888999988777554 67888888876654443333 3345789999999854 55566789
Q ss_pred EEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 82 CRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 82 I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
|..+++... .....+. ...+....+++.++|.+.++...
T Consensus 79 i~vwd~~~~--~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~ 117 (304)
T 2ynn_A 79 IRVFNYNTG--EKVVDFE-AHPDYIRSIAVHPTKPYVLSGSD 117 (304)
T ss_dssp EEEEETTTC--CEEEEEE-CCSSCEEEEEECSSSSEEEEEET
T ss_pred EEEEECCCC--cEEEEEe-CCCCcEEEEEEcCCCCEEEEECC
Confidence 999998642 1222232 22334567899999987776655
No 182
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.68 E-value=0.0011 Score=57.06 Aligned_cols=85 Identities=12% Similarity=0.109 Sum_probs=56.7
Q ss_pred CcEEEEEeCCCC----eEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEEC
Q 047259 37 HGQLLKYDPELE----ETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLA 112 (225)
Q Consensus 37 ~g~v~~~d~~~~----~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d 112 (225)
.|.|..||..++ .+..+......++.|+|+|+++.++++-...+.|..+++... ......+. ...+....+++.
T Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~-~~~~~~~~-~h~~~v~~i~~s 330 (430)
T 2xyi_A 253 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL-KLKLHSFE-SHKDEIFQVQWS 330 (430)
T ss_dssp TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT-TSCSEEEE-CCSSCEEEEEEC
T ss_pred CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC-CCCeEEee-cCCCCEEEEEEC
Confidence 678888887654 222333444668999999999878888888899999998642 11222332 223345688999
Q ss_pred CCCC-EEEEeec
Q 047259 113 PDGS-FWVALIK 123 (225)
Q Consensus 113 ~~G~-l~v~~~~ 123 (225)
++|. ++++...
T Consensus 331 p~~~~~l~s~~~ 342 (430)
T 2xyi_A 331 PHNETILASSGT 342 (430)
T ss_dssp SSCTTEEEEEET
T ss_pred CCCCCEEEEEeC
Confidence 9885 5666554
No 183
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.67 E-value=0.0043 Score=52.72 Aligned_cols=99 Identities=16% Similarity=0.156 Sum_probs=64.4
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
+.+++.++|+..++-.. .|.|..+|..+++......+ ......++|+|+++.| ++-+..+.
T Consensus 127 ~~v~~s~dg~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~ 188 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAE-----------------DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL-VSGSGDRT 188 (393)
T ss_dssp EEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSE
T ss_pred EEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEE-EEecCCCc
Confidence 35677777776666443 67888888877766555443 3456889999999855 56667789
Q ss_pred EEEEEecCCCCCceeEEeccCCCCCCceEECC-CCCEEEEeec
Q 047259 82 CRRYWLKGPRQGRLESFIEHLPGGPDNINLAP-DGSFWVALIK 123 (225)
Q Consensus 82 I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~-~G~l~v~~~~ 123 (225)
|..+++... ....... .......+++.+ +|+++++...
T Consensus 189 v~iwd~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 189 VRIWDLRTG---QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp EEEEETTTT---EEEEEEE-CSSCEEEEEECSTTCCEEEEEET
T ss_pred EEEEECCCC---eeEEEEE-cCCCcEEEEEECCCCCEEEEEcC
Confidence 999988642 2211111 222345677887 7887776654
No 184
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.63 E-value=0.0089 Score=55.05 Aligned_cols=142 Identities=10% Similarity=0.027 Sum_probs=81.3
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC------------CCEEEEEEecCCCCCceeEEeccC--
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW------------KFRCRRYWLKGPRQGRLESFIEHL-- 102 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~------------~~~I~~~~~~~~~~~~~~~~~~~~-- 102 (225)
...|+.+|..+|+.....-....-.+++|+ ||+.||++... ..+|+++++.+.......++....
T Consensus 154 ~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~ 232 (693)
T 3iuj_A 154 WREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ 232 (693)
T ss_dssp EEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG
T ss_pred eEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC
Confidence 357899998888754432111113679999 99988777644 257999887643222233332111
Q ss_pred CCCCCceEECCCCCEE-EEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC---CcEEEEEEC
Q 047259 103 PGGPDNINLAPDGSFW-VALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH---GKIIMDFND 178 (225)
Q Consensus 103 ~g~Pd~i~~d~~G~l~-v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~---G~~~~~~~~ 178 (225)
+..-.++.+++||+.. ++..... ....|+.+|.+ +++. .+..
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~---------------------------------~~~~i~~~d~~~~~~~~~-~l~~ 278 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANST---------------------------------SGNRLYVKDLSQENAPLL-TVQG 278 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSS---------------------------------SCCEEEEEETTSTTCCCE-EEEC
T ss_pred CeEEEEEEEcCCCCEEEEEEccCC---------------------------------CCcEEEEEECCCCCCceE-EEeC
Confidence 1112367889999844 3332210 03477777753 2443 4444
Q ss_pred CCCCcccceeEEEEeCCEEEEeeCC---CCeEEEEeCCCcc
Q 047259 179 PNATYISFVTSAVEFEDNLYMASIQ---SKFVGKLPLNTPE 216 (225)
Q Consensus 179 p~g~~~~~~t~~~~~~~~Lyv~~~~---~~~i~~~~~~~~~ 216 (225)
+.+. ....+...+++||+.+.. ..+|.++++++..
T Consensus 279 ~~~~---~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 279 DLDA---DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp SSSS---CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred CCCc---eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 3322 122244568899888754 3689999998754
No 185
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.62 E-value=0.0011 Score=55.85 Aligned_cols=84 Identities=11% Similarity=0.022 Sum_probs=52.9
Q ss_pred CcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCC
Q 047259 37 HGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG 115 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G 115 (225)
.|.|..+|..+++....... ....+.++++++++.++++....+.|..+++..........+. .....+..+++.+++
T Consensus 160 dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~v~~v~~sp~~ 238 (357)
T 4g56_B 160 DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC-ASDTIPTSVTWHPEK 238 (357)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT-TCCSCEEEEEECTTS
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec-cccccccchhhhhcc
Confidence 67788888877766555443 4556889999998777888888889998887642111110010 122335677888764
Q ss_pred -CEEEEe
Q 047259 116 -SFWVAL 121 (225)
Q Consensus 116 -~l~v~~ 121 (225)
.++++.
T Consensus 239 ~~~la~g 245 (357)
T 4g56_B 239 DDTFACG 245 (357)
T ss_dssp TTEEEEE
T ss_pred cceEEEe
Confidence 455543
No 186
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.60 E-value=0.0034 Score=54.05 Aligned_cols=137 Identities=6% Similarity=-0.031 Sum_probs=85.5
Q ss_pred CcEEEEEeCCCCe--------EEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCC-CCceeEEeccCCCCCC
Q 047259 37 HGQLLKYDPELEE--------TTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPR-QGRLESFIEHLPGGPD 107 (225)
Q Consensus 37 ~g~v~~~d~~~~~--------~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~-~~~~~~~~~~~~g~Pd 107 (225)
.|.|..++..++. ...........+.++|+|++..++++....+.|..+++.... ......+. .....+.
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~ 281 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEVN 281 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSCEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCCCeE
Confidence 6778778875421 112223345578999999655688888888999999987431 11222222 2334567
Q ss_pred ceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC--CcEEEEEECCCCCcc
Q 047259 108 NINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH--GKIIMDFNDPNATYI 184 (225)
Q Consensus 108 ~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~--G~~~~~~~~p~g~~~ 184 (225)
.+++.++|. ++++... .+.|..+|.. ++.+..+....+
T Consensus 282 ~i~~~p~~~~~l~tg~~------------------------------------dg~v~vwd~~~~~~~~~~~~~h~~--- 322 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSA------------------------------------DKTVALWDLRNLKLKLHSFESHKD--- 322 (430)
T ss_dssp EEEECSSCTTEEEEEET------------------------------------TSEEEEEETTCTTSCSEEEECCSS---
T ss_pred EEEeCCCCCCEEEEEeC------------------------------------CCeEEEEeCCCCCCCeEEeecCCC---
Confidence 899999886 6666554 3455555543 455666654333
Q ss_pred cceeEEEEe--CCEEEEeeCCCCeEEEEeCCC
Q 047259 185 SFVTSAVEF--EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 185 ~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.++.+... +..++++....+.|.++++..
T Consensus 323 -~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 323 -EIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp -CEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred -CEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 34555543 446777777788888888776
No 187
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.0015 Score=56.59 Aligned_cols=83 Identities=10% Similarity=0.013 Sum_probs=52.2
Q ss_pred CcEEEEEeCCCCeEE-----EEecCccccceeEEecC---CCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCc
Q 047259 37 HGQLLKYDPELEETT-----VLHEGFYFANGVALSKD---ENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDN 108 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~-----~~~~~~~~pnGi~~~~d---g~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~ 108 (225)
.|.|+.++..+++.. .+.........++|+|| +++| ++-...+.|..+++... .....+.....+....
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l-~s~~~d~~i~vwd~~~~--~~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFI-ITSDRDEHIKISHYPQC--FIVDKWLFGHKHFVSS 246 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEE-EEEETTSCEEEEEESCT--TCEEEECCCCSSCEEE
T ss_pred CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEE-EEEcCCCcEEEEECCCC--ceeeeeecCCCCceEE
Confidence 577888886544432 12223345688999999 7644 55556789999998642 1222333222344678
Q ss_pred eEECCCCCEEEEeec
Q 047259 109 INLAPDGSFWVALIK 123 (225)
Q Consensus 109 i~~d~~G~l~v~~~~ 123 (225)
+++. +|+++++...
T Consensus 247 ~~~s-d~~~l~s~~~ 260 (450)
T 2vdu_B 247 ICCG-KDYLLLSAGG 260 (450)
T ss_dssp EEEC-STTEEEEEES
T ss_pred EEEC-CCCEEEEEeC
Confidence 9999 8988777655
No 188
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.59 E-value=0.0065 Score=53.83 Aligned_cols=137 Identities=14% Similarity=0.088 Sum_probs=83.9
Q ss_pred CcEEEEEeCCCCeEEEEecCc-c---ccceeEEecC-CCEEEEEeCCCCEEEEEEecCCCCCceeEEec---cCCCCCCc
Q 047259 37 HGQLLKYDPELEETTVLHEGF-Y---FANGVALSKD-ENFVVVCESWKFRCRRYWLKGPRQGRLESFIE---HLPGGPDN 108 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~-~---~pnGi~~~~d-g~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~---~~~g~Pd~ 108 (225)
.|.|..||..+++........ . ....++++|+ ++.|+. -...+.|..+++... .....+.. ...+....
T Consensus 182 d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~~v~~ 258 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT-VGSDRKISCFDGKSG--EFLKYIEDDQEPVQGGIFA 258 (615)
T ss_dssp TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE-EETTCCEEEEETTTC--CEEEECCBTTBCCCSCEEE
T ss_pred CCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEE-EeCCCeEEEEECCCC--CEeEEecccccccCCceEE
Confidence 678888888766655544433 3 4678999999 885554 445689999998642 11222211 12233567
Q ss_pred eEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccce
Q 047259 109 INLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFV 187 (225)
Q Consensus 109 i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~ 187 (225)
+++. +|+++++... .+.|..+|.. ++.+..+..+....-..+
T Consensus 259 ~~~~-~~~~l~~~~~------------------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 301 (615)
T 1pgu_A 259 LSWL-DSQKFATVGA------------------------------------DATIRVWDVTTSKCVQKWTLDKQQLGNQQ 301 (615)
T ss_dssp EEES-SSSEEEEEET------------------------------------TSEEEEEETTTTEEEEEEECCTTCGGGCE
T ss_pred EEEc-CCCEEEEEcC------------------------------------CCcEEEEECCCCcEEEEEcCCCCcccCce
Confidence 8888 8887777665 3566666654 777777776532222233
Q ss_pred eEEEE-eCCEEEEeeCCCCeEEEEeCCC
Q 047259 188 TSAVE-FEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 188 t~~~~-~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
..+.. .++.|+.+ ...+.|..+++..
T Consensus 302 ~~~~~~~~~~l~~~-~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 302 VGVVATGNGRIISL-SLDGTLNFYELGH 328 (615)
T ss_dssp EEEEEEETTEEEEE-ETTSCEEEEETTE
T ss_pred eEEEeCCCCeEEEE-ECCCCEEEEECCC
Confidence 34433 44555444 4567788877764
No 189
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.59 E-value=0.0069 Score=50.69 Aligned_cols=83 Identities=12% Similarity=-0.016 Sum_probs=54.4
Q ss_pred CCcEEEEEeCCCCeEEEEecCc---cccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEEC
Q 047259 36 PHGQLLKYDPELEETTVLHEGF---YFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLA 112 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~~---~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d 112 (225)
..|.|..+|..++.+..+.... .....++++|+++.| ++-...+.|..+++++. ....+. ...+....+++.
T Consensus 139 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~---~~~~~~-~h~~~v~~~~~~ 213 (383)
T 3ei3_B 139 IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQML-ATGDSTGRLLLLGLDGH---EIFKEK-LHKAKVTHAEFN 213 (383)
T ss_dssp TTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEE-EEEETTSEEEEEETTSC---EEEEEE-CSSSCEEEEEEC
T ss_pred CCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEE-EEECCCCCEEEEECCCC---EEEEec-cCCCcEEEEEEC
Confidence 4677888887655555544332 446899999999955 45556689999998532 222332 223445789999
Q ss_pred CCCC-EEEEeec
Q 047259 113 PDGS-FWVALIK 123 (225)
Q Consensus 113 ~~G~-l~v~~~~ 123 (225)
++|. ++++...
T Consensus 214 ~~~~~~l~s~~~ 225 (383)
T 3ei3_B 214 PRCDWLMATSSV 225 (383)
T ss_dssp SSCTTEEEEEET
T ss_pred CCCCCEEEEEeC
Confidence 9998 6666554
No 190
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.59 E-value=0.0086 Score=49.70 Aligned_cols=85 Identities=13% Similarity=0.111 Sum_probs=57.9
Q ss_pred CCCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC
Q 047259 35 KPHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP 113 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~ 113 (225)
...+.|..+|..+++......+ ......++++|+++ ++++-...+.|..+++... .....+. ........+++.+
T Consensus 161 s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~--~~~~~~~-~h~~~v~~v~~~p 236 (340)
T 1got_B 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREG--MCRQTFT-GHESDINAICFFP 236 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC--SEEEEEC-CCSSCEEEEEECT
T ss_pred ECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCC--eeEEEEc-CCcCCEEEEEEcC
Confidence 3467788888877765544443 34568899999998 6677777889999998642 1222332 2233456889999
Q ss_pred CCCEEEEeec
Q 047259 114 DGSFWVALIK 123 (225)
Q Consensus 114 ~G~l~v~~~~ 123 (225)
+|+++++...
T Consensus 237 ~~~~l~s~s~ 246 (340)
T 1got_B 237 NGNAFATGSD 246 (340)
T ss_dssp TSSEEEEEET
T ss_pred CCCEEEEEcC
Confidence 9998877655
No 191
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.58 E-value=0.012 Score=49.85 Aligned_cols=60 Identities=13% Similarity=0.067 Sum_probs=39.3
Q ss_pred cceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 60 ANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 60 pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
...++|+|||+.| ++-...+.|..++++.. .....+. ........+++.++|...++...
T Consensus 126 v~~v~~s~dg~~l-~s~~~d~~i~iwd~~~~--~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~ 185 (393)
T 1erj_A 126 IRSVCFSPDGKFL-ATGAEDRLIRIWDIENR--KIVMILQ-GHEQDIYSLDYFPSGDKLVSGSG 185 (393)
T ss_dssp EEEEEECTTSSEE-EEEETTSCEEEEETTTT--EEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCCCCEE-EEEcCCCeEEEEECCCC--cEEEEEc-cCCCCEEEEEEcCCCCEEEEecC
Confidence 5689999999855 55556788999988642 1112222 12233467889999987776655
No 192
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.57 E-value=0.007 Score=51.55 Aligned_cols=139 Identities=15% Similarity=0.178 Sum_probs=86.0
Q ss_pred CCCcEEEEEeCCCCeEEEEecCccccceeEEecCCC-------EEEEEeCC--CCEEEEEEecCCCCCceeEEecc-CC-
Q 047259 35 KPHGQLLKYDPELEETTVLHEGFYFANGVALSKDEN-------FVVVCESW--KFRCRRYWLKGPRQGRLESFIEH-LP- 103 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~-------~Lyv~~~~--~~~I~~~~~~~~~~~~~~~~~~~-~~- 103 (225)
.+.+.|+.||.+ |+....+.. ..+|++.+-|+=+ .+|++++. .++|..|+++.. .+....+... .|
T Consensus 47 ~k~~gL~Vydl~-G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~-~~~l~~i~~~~~pv 123 (355)
T 3amr_A 47 NKKSGLVVYSLD-GKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK-NGTLQSMTDPDHPI 123 (355)
T ss_dssp ETTTEEEEEETT-SCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT-TCCEEECSCTTSCE
T ss_pred cCCCCEEEEcCC-CcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC-CCceeeccccccCc
Confidence 446789999995 665554444 5789988887421 56999998 999999987532 1223332110 02
Q ss_pred ----CCCCceEE--CCC-CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEEC--CCC----
Q 047259 104 ----GGPDNINL--APD-GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVD--THG---- 170 (225)
Q Consensus 104 ----g~Pd~i~~--d~~-G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d--~~G---- 170 (225)
..|.|+|+ +++ |.+|+-...... ....+++. .+|
T Consensus 124 ~t~~~~pyGlcly~~~~~g~~yafV~~k~G---------------------------------~~~q~~l~~~~~g~~~~ 170 (355)
T 3amr_A 124 ATAINEVYGFTLYHSQKTGKYYAMVTGKEG---------------------------------EFEQYELKADKNGYISG 170 (355)
T ss_dssp ECCCSSCCCEEEEECTTTCCEEEEEECSSS---------------------------------EEEEEEEEECTTSCEEE
T ss_pred CCCCCCeeEEEEEecCCCCcEEEEEECCCC---------------------------------eEEEEEEEeCCCCcccc
Confidence 46999999 874 655554444210 22333332 234
Q ss_pred cEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCc
Q 047259 171 KIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 171 ~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
+++..+..+. .+-+++.+ .++||+++-. .-|++|+.+.+
T Consensus 171 ~lVR~f~lgs-----q~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~ 211 (355)
T 3amr_A 171 KKVRAFKMNS-----QTEGMAADDEYGRLYIAEED-EAIWKFSAEPD 211 (355)
T ss_dssp EEEEEEECSS-----CEEEEEEETTTTEEEEEETT-TEEEEEECSTT
T ss_pred eEEEEecCCC-----CcceEEEcCCCCeEEEeccc-ceEEEEeCCcC
Confidence 5566677642 24455544 5999999987 45999997643
No 193
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.57 E-value=0.0063 Score=51.64 Aligned_cols=138 Identities=4% Similarity=-0.026 Sum_probs=84.5
Q ss_pred CcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeC--CCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC
Q 047259 37 HGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCES--WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP 113 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~--~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~ 113 (225)
.|.|..||..+++..... ........++++|++..++++.. ..+.|..+++... .....+ . .......+++.+
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~--~~~~~~-~-~~~~v~~~~~s~ 313 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG--ARVNTV-D-AGSQVTSLIWSP 313 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC--CEEEEE-E-CSSCEEEEEECS
T ss_pred CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC--CEEEEE-e-CCCcEEEEEECC
Confidence 578888888766554443 34456789999999887887755 6789999998642 112222 1 234467899999
Q ss_pred CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEE--ECCCCCcccceeEE
Q 047259 114 DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDF--NDPNATYISFVTSA 190 (225)
Q Consensus 114 ~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~--~~p~g~~~~~~t~~ 190 (225)
+|+..++..+.. .+.|..++.. ++..... ....+ .++.+
T Consensus 314 ~~~~l~~~~g~~----------------------------------dg~i~v~~~~~~~~~~~~~~~~h~~----~v~~~ 355 (401)
T 4aez_A 314 HSKEIMSTHGFP----------------------------------DNNLSIWSYSSSGLTKQVDIPAHDT----RVLYS 355 (401)
T ss_dssp SSSEEEEEECTT----------------------------------TCEEEEEEEETTEEEEEEEEECCSS----CCCEE
T ss_pred CCCeEEEEeecC----------------------------------CCcEEEEecCCccceeEEEecCCCC----CEEEE
Confidence 999887765411 3445555433 4444433 32222 24444
Q ss_pred EEe-CCEEEEeeCCCCeEEEEeCCCcc
Q 047259 191 VEF-EDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 191 ~~~-~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
... ++.+.++....+.|..+++.+..
T Consensus 356 ~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 356 ALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EECTTSSEEEEECTTSEEEEEECCC--
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 443 45555666667888888886644
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.56 E-value=0.0027 Score=58.39 Aligned_cols=141 Identities=10% Similarity=-0.075 Sum_probs=78.6
Q ss_pred CcEEEEEeCCCCeEEEEecCcccc--ceeEEecCCCEEEEEeCC------------CCEEEEEEecCCCCCceeEEecc-
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFA--NGVALSKDENFVVVCESW------------KFRCRRYWLKGPRQGRLESFIEH- 101 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~p--nGi~~~~dg~~Lyv~~~~------------~~~I~~~~~~~~~~~~~~~~~~~- 101 (225)
...|+.+|..+|+... ...+... .+++|+|||+.|+.+... ..+|+++++.++......++...
T Consensus 146 ~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~ 224 (695)
T 2bkl_A 146 EAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG 224 (695)
T ss_dssp CCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC
T ss_pred eEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC
Confidence 4578999988776430 1122222 689999999988776542 34699998865322122232210
Q ss_pred CCCCCCceEECCCCCEE-EEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECC
Q 047259 102 LPGGPDNINLAPDGSFW-VALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDP 179 (225)
Q Consensus 102 ~~g~Pd~i~~d~~G~l~-v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p 179 (225)
.+..-.++.+++||+.. ++..... . ...|+.++.. |++......
T Consensus 225 ~~~~~~~~~~SpDG~~l~~~~~~~~-------------------------------~--~~~l~~~~~~~~~~~~l~~~- 270 (695)
T 2bkl_A 225 DPTTFLQSDLSRDGKYLFVYILRGW-------------------------------S--ENDVYWKRPGEKDFRLLVKG- 270 (695)
T ss_dssp CTTCEEEEEECTTSCCEEEEEEETT-------------------------------T--EEEEEEECTTCSSCEEEEEC-
T ss_pred CCEEEEEEEECCCCCEEEEEEeCCC-------------------------------C--ceEEEEEcCCCCceEEeecC-
Confidence 11122378899999743 3333210 0 4577777764 555433332
Q ss_pred CCCcccceeEEEEeCCEEEEeeC---CCCeEEEEeCCCcc
Q 047259 180 NATYISFVTSAVEFEDNLYMASI---QSKFVGKLPLNTPE 216 (225)
Q Consensus 180 ~g~~~~~~t~~~~~~~~Lyv~~~---~~~~i~~~~~~~~~ 216 (225)
.+.. ...+..+++ ||+.+. ...+|.++++++..
T Consensus 271 ~~~~---~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 271 VGAK---YEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp SSCC---EEEEEETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred CCce---EEEEecCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 2221 122223344 888765 35789999987643
No 195
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.55 E-value=0.0012 Score=55.21 Aligned_cols=79 Identities=10% Similarity=-0.049 Sum_probs=49.4
Q ss_pred cEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeC--CC--CEEEEEEecCCCCCceeEEeccCCCCCCceEE
Q 047259 38 GQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCES--WK--FRCRRYWLKGPRQGRLESFIEHLPGGPDNINL 111 (225)
Q Consensus 38 g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~--~~--~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~ 111 (225)
.+|+.++.++++.+.+... ...+..++|+|||+.|+++.. +. +.|+.++++++ ..+.+. ..++. .+++
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g---~~~~l~-~~~~~--~~~~ 289 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL---ENEEVM-VMPPC--SHLM 289 (396)
T ss_dssp CCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC---CEEEEE-ECCSE--EEEE
T ss_pred ceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC---CeEEee-eCCCC--CCCc
Confidence 5789999876665555442 234677899999997655532 22 34999988642 333322 12332 2788
Q ss_pred CC-CCCEEEEee
Q 047259 112 AP-DGSFWVALI 122 (225)
Q Consensus 112 d~-~G~l~v~~~ 122 (225)
.+ +|++++...
T Consensus 290 s~~dg~~l~~~~ 301 (396)
T 3c5m_A 290 SNFDGSLMVGDG 301 (396)
T ss_dssp ECSSSSEEEEEE
T ss_pred cCCCCceEEEec
Confidence 88 999776643
No 196
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.52 E-value=0.00083 Score=61.46 Aligned_cols=95 Identities=16% Similarity=0.093 Sum_probs=60.7
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCcc----ccceeEEecCCCEEEEEeC
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFY----FANGVALSKDENFVVVCES 77 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~----~pnGi~~~~dg~~Lyv~~~ 77 (225)
+..+++.+||++.++ +. .|.|+.+|..+++.+.+..... ....++|||||++|.++..
T Consensus 19 ~~~~~~spdg~~~~~-~~-----------------dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~ 80 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQ-----------------KGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYN 80 (723)
T ss_dssp CCCCCBSSSSCBCCC-CS-----------------SSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEES
T ss_pred ccccEEcCCCcEEEE-eC-----------------CCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEec
Confidence 456777888885544 22 5689999988777766665543 3788999999998766643
Q ss_pred C--------CCEEEEEEecCCCCCceeEEeccC--CCCCCceEECCCCCE
Q 047259 78 W--------KFRCRRYWLKGPRQGRLESFIEHL--PGGPDNINLAPDGSF 117 (225)
Q Consensus 78 ~--------~~~I~~~~~~~~~~~~~~~~~~~~--~g~Pd~i~~d~~G~l 117 (225)
. .+.|+.++++++ ..+.+.... ......+++.+||+.
T Consensus 81 ~~~~~~~~~~~~i~~~d~~~~---~~~~l~~~~~~~~~~~~~~~SPdG~~ 127 (723)
T 1xfd_A 81 VEPIYQHSYTGYYVLSKIPHG---DPQSLDPPEVSNAKLQYAGWGPKGQQ 127 (723)
T ss_dssp CCCCSSSCCCSEEEEEESSSC---CCEECCCTTCCSCCCSBCCBCSSTTC
T ss_pred CccceeecceeeEEEEECCCC---ceEeccCCccccccccccEECCCCCE
Confidence 2 268889998753 222222111 112456777777753
No 197
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.51 E-value=0.0083 Score=55.32 Aligned_cols=152 Identities=11% Similarity=0.084 Sum_probs=94.7
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec-CccccceeEEecCCCEEEEEeCCCCE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE-GFYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
..+++.|+|...++-.. .|.|..||..+++...... .......++|+||++.|.++. ..+.
T Consensus 17 ~~i~~sp~~~~la~~~~-----------------~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~ 78 (814)
T 3mkq_A 17 KGIDFHPTEPWVLTTLY-----------------SGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-DDFR 78 (814)
T ss_dssp EEEEECSSSSEEEEEET-----------------TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-TTSE
T ss_pred EEEEECCCCCEEEEEeC-----------------CCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe-CCCe
Confidence 46788888876666443 6788889977676544443 345568999999999665554 5789
Q ss_pred EEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcce
Q 047259 82 CRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGA 161 (225)
Q Consensus 82 I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~ 161 (225)
|..+++.+. .....+. ...+....+++.++|...++... .+
T Consensus 79 i~vw~~~~~--~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~------------------------------------dg 119 (814)
T 3mkq_A 79 IRVFNYNTG--EKVVDFE-AHPDYIRSIAVHPTKPYVLSGSD------------------------------------DL 119 (814)
T ss_dssp EEEEETTTC--CEEEEEE-CCSSCEEEEEECSSSSEEEEEET------------------------------------TS
T ss_pred EEEEECCCC--cEEEEEe-cCCCCEEEEEEeCCCCEEEEEcC------------------------------------CC
Confidence 999998642 1222222 23344578899999987665544 33
Q ss_pred EEEEECCC--CcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCc
Q 047259 162 RIVKVDTH--GKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 162 ~V~~~d~~--G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.|...|.+ ......+....+ .++.+... ++.++++....+.|..+++...
T Consensus 120 ~i~vw~~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~ 173 (814)
T 3mkq_A 120 TVKLWNWENNWALEQTFEGHEH----FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (814)
T ss_dssp EEEEEEGGGTSEEEEEEECCSS----CEEEEEEETTEEEEEEEEETTSEEEEEETTCS
T ss_pred EEEEEECCCCceEEEEEcCCCC----cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 44444433 355555554332 24444443 4556666666777888777543
No 198
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.51 E-value=0.0058 Score=56.74 Aligned_cols=94 Identities=13% Similarity=0.171 Sum_probs=57.9
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCc------cccceeEEecCCCEEEEEeC
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGF------YFANGVALSKDENFVVVCES 77 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~------~~pnGi~~~~dg~~Lyv~~~ 77 (225)
.+..+++|+||+... +.|+++++.+++.+...... ...+.|..+.+++.|||+..
T Consensus 150 ~i~~d~~g~lWigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~ 210 (758)
T 3ott_A 150 SIIRTKDNQIYVGTY-------------------NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE 210 (758)
T ss_dssp EEEECTTCCEEEEET-------------------TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCEEEEeC-------------------CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC
Confidence 455677788887632 24788888766655432111 12346777777777899873
Q ss_pred CCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEe
Q 047259 78 WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVAL 121 (225)
Q Consensus 78 ~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~ 121 (225)
+.|++|++.+. ....+..........|..|.+|+||++.
T Consensus 211 --~Gl~~~~~~~~---~~~~~~~l~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 211 --GYLFQYFPSTG---QIKQTEAFHNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp --EEEEEEETTTT---EEEEEEEEEEEEEEEEEECTTCCEEEEE
T ss_pred --CCCeEEcCCCC---eEEeccCCCCCeEEEEEEcCCCCEEEEe
Confidence 47999987642 2222211011123578899999999987
No 199
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.49 E-value=0.0026 Score=53.74 Aligned_cols=100 Identities=15% Similarity=-0.012 Sum_probs=61.1
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEE
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCR 83 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~ 83 (225)
.+++.|||++.++-++ ...+.|..+|..+++...........+.++|+|||++|..+. .+.+.
T Consensus 138 ~v~fSpDg~~la~as~---------------~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s--~~~~~ 200 (365)
T 4h5i_A 138 LVYISREGTVAAIASS---------------KVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT--GSSLE 200 (365)
T ss_dssp EEEECTTSSCEEEEES---------------CSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC--SSCEE
T ss_pred EEEEcCCCCEEEEEEC---------------CCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc--ceeEE
Confidence 4778888875443222 125788888988777665555555678999999999654443 45677
Q ss_pred EEEecCCCCCcee-EEec-cCCCCCCceEECCCCCEEEEeec
Q 047259 84 RYWLKGPRQGRLE-SFIE-HLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 84 ~~~~~~~~~~~~~-~~~~-~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
+++.... ... .... ........+++.++|.++++...
T Consensus 201 ~~~~~~~---~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~ 239 (365)
T 4h5i_A 201 VISTVTG---SCIARKTDFDKNWSLSKINFIADDTVLIAASL 239 (365)
T ss_dssp EEETTTC---CEEEEECCCCTTEEEEEEEEEETTEEEEEEEE
T ss_pred EEEeccC---cceeeeecCCCCCCEEEEEEcCCCCEEEEEec
Confidence 7776432 111 1111 11122457888888887666544
No 200
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.44 E-value=0.0067 Score=53.72 Aligned_cols=155 Identities=11% Similarity=0.048 Sum_probs=92.4
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRC 82 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I 82 (225)
+.+++.++|+..++-... ....+.|+.+|.. .....+.......+.++++|+++.++++-...+.|
T Consensus 120 ~~~~~s~~~~~l~~~~~~-------------~~~~~~v~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 185 (615)
T 1pgu_A 120 SDISWDFEGRRLCVVGEG-------------RDNFGVFISWDSG-NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSV 185 (615)
T ss_dssp EEEEECTTSSEEEEEECC-------------SSCSEEEEETTTC-CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEE
T ss_pred EEEEEeCCCCEEEEeccC-------------CCCccEEEEEECC-CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcE
Confidence 356677777655543321 1224788888843 33444444455678999999998667777778899
Q ss_pred EEEEecCCCCCceeEEeccCCC---CCCceEECCC-CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCC
Q 047259 83 RRYWLKGPRQGRLESFIEHLPG---GPDNINLAPD-GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGND 158 (225)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~g---~Pd~i~~d~~-G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 158 (225)
..+++... .....+. .... ....+++.++ |+++++...
T Consensus 186 ~vwd~~~~--~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~----------------------------------- 227 (615)
T 1pgu_A 186 VFYQGPPF--KFSASDR-THHKQGSFVRDVEFSPDSGEFVITVGS----------------------------------- 227 (615)
T ss_dssp EEEETTTB--EEEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEET-----------------------------------
T ss_pred EEEeCCCc--ceeeeec-ccCCCCceEEEEEECCCCCCEEEEEeC-----------------------------------
Confidence 99987531 1122222 1222 3457899999 987776655
Q ss_pred cceEEEEECC-CCcEEEEE-E---CCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 047259 159 AGARIVKVDT-HGKIIMDF-N---DPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 159 ~~~~V~~~d~-~G~~~~~~-~---~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+.|..+|. .|+.+..+ . ...+ .++.+...++.++++....+.|..+++..
T Consensus 228 -dg~i~vwd~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 228 -DRKISCFDGKSGEFLKYIEDDQEPVQG----GIFALSWLDSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp -TCCEEEEETTTCCEEEECCBTTBCCCS----CEEEEEESSSSEEEEEETTSEEEEEETTT
T ss_pred -CCeEEEEECCCCCEeEEecccccccCC----ceEEEEEcCCCEEEEEcCCCcEEEEECCC
Confidence 345666664 47777666 3 2222 34444443544555555567777777764
No 201
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.44 E-value=0.027 Score=46.62 Aligned_cols=52 Identities=15% Similarity=0.059 Sum_probs=36.8
Q ss_pred CcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.+.|..+|..+++..... ........++|+||++.| ++-...+.|..+++.+
T Consensus 97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQI-LSAGAEREIKLWNILG 149 (343)
T ss_dssp TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEE-EEEETTSCEEEEESSS
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEE-EEEcCCCEEEEEeccC
Confidence 678888887766544333 334556889999999855 4555678888888753
No 202
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.43 E-value=0.00066 Score=54.24 Aligned_cols=96 Identities=11% Similarity=0.091 Sum_probs=61.7
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC-------CeEEEEec-CccccceeEEecCCCEEEE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL-------EETTVLHE-GFYFANGVALSKDENFVVV 74 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-------~~~~~~~~-~~~~pnGi~~~~dg~~Lyv 74 (225)
.++++.|+|.||.. . .|.||++++.+ +.-+.+.+ +...=..+.++++|. ||+
T Consensus 44 ~~laf~P~G~LYaV--~-----------------~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYa 103 (236)
T 1tl2_A 44 KFLFLSPGGELYGV--L-----------------NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYA 103 (236)
T ss_dssp SEEEECTTSCEEEE--E-----------------TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-EEE
T ss_pred eeEEECCCccEEEE--e-----------------CCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-EEE
Confidence 47888888888888 2 46889988754 22223322 334457799999997 998
Q ss_pred EeCCCCEEEEEEecC--C-C-CCceeEEecc-CCCCCCceEECCCCCEEEEe
Q 047259 75 CESWKFRCRRYWLKG--P-R-QGRLESFIEH-LPGGPDNINLAPDGSFWVAL 121 (225)
Q Consensus 75 ~~~~~~~I~~~~~~~--~-~-~~~~~~~~~~-~~g~Pd~i~~d~~G~l~v~~ 121 (225)
+ .+++|+|++.-. . . +....++.+. -... .-+.++++|.||.+.
T Consensus 104 v--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~-~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 104 V--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGF-KFLFFHPNGYLYAVH 152 (236)
T ss_dssp E--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGE-EEEEECTTSCEEEEE
T ss_pred e--CCCEEEEeCCCcCCCCceeccccEeccCCCCce-EEEEECCCceEEEEe
Confidence 8 348999998632 1 0 1111222210 0112 578999999999988
No 203
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.43 E-value=0.0019 Score=54.32 Aligned_cols=138 Identities=12% Similarity=0.137 Sum_probs=80.0
Q ss_pred CcEEEEEeCCCCeEEEEe---cCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC
Q 047259 37 HGQLLKYDPELEETTVLH---EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP 113 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~---~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~ 113 (225)
.|.|..+|..+++..... .....+..++++|++..++++-...+.|..+++... .....+. .....-..+++.+
T Consensus 203 dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--~~~~~~~-~~~~~v~~l~~sp 279 (357)
T 4g56_B 203 DGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--DSAQTSA-VHSQNITGLAYSY 279 (357)
T ss_dssp TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG--GGCEEEC-CCSSCEEEEEECS
T ss_pred CCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC--cEeEEEe-ccceeEEEEEEcC
Confidence 566777776554432221 123346789999987667777777789999998642 1222232 1222346788988
Q ss_pred CCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEE
Q 047259 114 DGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAV 191 (225)
Q Consensus 114 ~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~ 191 (225)
+|. +.++... .+.|...|.+ |+++..+.. .+ .++.++
T Consensus 280 ~~~~~lasgs~------------------------------------D~~i~iwd~~~~~~~~~~~H-~~----~V~~va 318 (357)
T 4g56_B 280 HSSPFLASISE------------------------------------DCTVAVLDADFSEVFRDLSH-RD----FVTGVA 318 (357)
T ss_dssp SSSCCEEEEET------------------------------------TSCEEEECTTSCEEEEECCC-SS----CEEEEE
T ss_pred CCCCEEEEEeC------------------------------------CCEEEEEECCCCcEeEECCC-CC----CEEEEE
Confidence 875 4444333 3456666765 566554432 22 356666
Q ss_pred Ee--CCEEEEeeCCCCeEEEEeCCCcccc
Q 047259 192 EF--EDNLYMASIQSKFVGKLPLNTPEAE 218 (225)
Q Consensus 192 ~~--~~~Lyv~~~~~~~i~~~~~~~~~~~ 218 (225)
.. ++.++++....+.|...+++.+.++
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 53 5666666667788888888766544
No 204
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.0038 Score=52.55 Aligned_cols=142 Identities=7% Similarity=-0.057 Sum_probs=81.0
Q ss_pred CcEEEEEeCCC----C-eEEEEecCccccceeEEecC-CCEEEEEeCCCCEEEEEEecCCCCC----ceeEEe--ccCCC
Q 047259 37 HGQLLKYDPEL----E-ETTVLHEGFYFANGVALSKD-ENFVVVCESWKFRCRRYWLKGPRQG----RLESFI--EHLPG 104 (225)
Q Consensus 37 ~g~v~~~d~~~----~-~~~~~~~~~~~pnGi~~~~d-g~~Lyv~~~~~~~I~~~~~~~~~~~----~~~~~~--~~~~g 104 (225)
.|.|..|+..+ . .+..+.........++|+|+ ++ ++++-...+.|..+++...... ....+. ....+
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 166 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDN-VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD 166 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTT-BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCC-EEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence 56777777654 1 23333334456789999998 55 6666667789999998753100 111110 11223
Q ss_pred CCCceEECCC-CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCC
Q 047259 105 GPDNINLAPD-GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNAT 182 (225)
Q Consensus 105 ~Pd~i~~d~~-G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~ 182 (225)
....+++.++ ++++++... .+.|..+|.+ ++.+..+..+...
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~------------------------------------dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGS------------------------------------SNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp CCCEEEECSSCTTEEEEESS------------------------------------SSCEEEEETTTTEEEEEECCCCCS
T ss_pred CeeEEEeCCCCCcEEEEEcC------------------------------------CCCEEEEECCCCCcceEEeccccc
Confidence 4678999998 677776654 3456666654 6666666553100
Q ss_pred --cccceeEEEEe--CCEEEEeeCCCC---eEEEEeCCCc
Q 047259 183 --YISFVTSAVEF--EDNLYMASIQSK---FVGKLPLNTP 215 (225)
Q Consensus 183 --~~~~~t~~~~~--~~~Lyv~~~~~~---~i~~~~~~~~ 215 (225)
.-..++.+... +..++++....+ .|..+++...
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 01134555543 234555544555 7888887764
No 205
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.0093 Score=49.92 Aligned_cols=132 Identities=11% Similarity=-0.011 Sum_probs=76.4
Q ss_pred CcEEEEEeCCCCeEEEEecCcc-c---------------cceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEec
Q 047259 37 HGQLLKYDPELEETTVLHEGFY-F---------------ANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIE 100 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~-~---------------pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~ 100 (225)
.|.|..+|..+++......... . ...+++++++. +++-...+.|..+++... .....+.
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~i~~~d~~~~--~~~~~~~- 244 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK--FVIPGPKGAIFVYQITEK--TPTGKLI- 244 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE--EEEECGGGCEEEEETTCS--SCSEEEC-
T ss_pred CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE--EEEEcCCCeEEEEEcCCC--ceeeeec-
Confidence 5678888876666544433222 2 78899999863 455556789999998742 1122222
Q ss_pred cCCCCCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECC
Q 047259 101 HLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDP 179 (225)
Q Consensus 101 ~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p 179 (225)
........+++.++|+++++... .+.|..+|.. ++.+..+...
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~------------------------------------d~~i~i~d~~~~~~~~~~~~~ 288 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASD------------------------------------DGTLRIWHGGNGNSQNCFYGH 288 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEET------------------------------------TSCEEEECSSSBSCSEEECCC
T ss_pred cCCCceEEEEECCCCCEEEEEcC------------------------------------CCEEEEEECCCCccceEecCC
Confidence 22333467899999987766654 3455556643 5555555432
Q ss_pred CCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCCC
Q 047259 180 NATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 180 ~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+ .++.+... ++ ++++....+.|..+++..
T Consensus 289 ~~----~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~ 319 (425)
T 1r5m_A 289 SQ----SIVSASWVGDD-KVISCSMDGSVRLWSLKQ 319 (425)
T ss_dssp SS----CEEEEEEETTT-EEEEEETTSEEEEEETTT
T ss_pred Cc----cEEEEEECCCC-EEEEEeCCCcEEEEECCC
Confidence 22 23444443 44 444555566777777654
No 206
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.41 E-value=0.0078 Score=50.52 Aligned_cols=137 Identities=13% Similarity=0.076 Sum_probs=80.1
Q ss_pred CcEEEEEeCCCCeEEEEe---cCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC
Q 047259 37 HGQLLKYDPELEETTVLH---EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP 113 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~---~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~ 113 (225)
.+.|..+|..+++..... ........++++|++..++++-..++.|..+++... .....+.. ....-..+++.+
T Consensus 191 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~--~~~~~~~~-h~~~v~~v~fsp 267 (344)
T 4gqb_B 191 DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST--SCVLSSAV-HSQCVTGLVFSP 267 (344)
T ss_dssp TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC----CCEEEEC-CSSCEEEEEECS
T ss_pred ccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC--cEEEEEcC-CCCCEEEEEEcc
Confidence 567888887666543332 122346789999977668888778889999998642 12223322 223346789999
Q ss_pred CCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEE
Q 047259 114 DGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAV 191 (225)
Q Consensus 114 ~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~ 191 (225)
+|. +.++... .+.|...|.. |++. .+..-.+ .++.+.
T Consensus 268 ~g~~~lasgs~------------------------------------D~~i~vwd~~~~~~~-~~~~H~~----~V~~v~ 306 (344)
T 4gqb_B 268 HSVPFLASLSE------------------------------------DCSLAVLDSSLSELF-RSQAHRD----FVRDAT 306 (344)
T ss_dssp SSSCCEEEEET------------------------------------TSCEEEECTTCCEEE-EECCCSS----CEEEEE
T ss_pred CCCeEEEEEeC------------------------------------CCeEEEEECCCCcEE-EEcCCCC----CEEEEE
Confidence 885 4444433 3455666665 4443 3332222 355565
Q ss_pred Ee--CCEEEEeeCCCCeEEEEeCCCccc
Q 047259 192 EF--EDNLYMASIQSKFVGKLPLNTPEA 217 (225)
Q Consensus 192 ~~--~~~Lyv~~~~~~~i~~~~~~~~~~ 217 (225)
.. +..|+.+.-..+.|....++.+..
T Consensus 307 ~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 307 WSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 53 456766666678888888776543
No 207
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.38 E-value=0.0006 Score=57.04 Aligned_cols=86 Identities=15% Similarity=0.010 Sum_probs=47.0
Q ss_pred CcEEEEEeCCCCe----EEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCC-CCceeEEeccCCCCCCceEE
Q 047259 37 HGQLLKYDPELEE----TTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPR-QGRLESFIEHLPGGPDNINL 111 (225)
Q Consensus 37 ~g~v~~~d~~~~~----~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~-~~~~~~~~~~~~g~Pd~i~~ 111 (225)
.|.|..||..+++ ...+.........++|+||++.|+.+ +..+.|..++++... ......+.....+....+++
T Consensus 76 d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 76 DRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVG-SGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp TSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEE-ESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred CCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEE-ecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 5667777765444 23333444567899999999855544 456788888876421 11122332112334568899
Q ss_pred CCCCCEEEEeec
Q 047259 112 APDGSFWVALIK 123 (225)
Q Consensus 112 d~~G~l~v~~~~ 123 (225)
.++|++.++...
T Consensus 155 ~~~~~~l~~~~~ 166 (377)
T 3dwl_C 155 HPNNVLLAAGCA 166 (377)
T ss_dssp CTTSSEEEEEES
T ss_pred cCCCCEEEEEeC
Confidence 999987766554
No 208
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.38 E-value=0.004 Score=52.13 Aligned_cols=121 Identities=17% Similarity=0.094 Sum_probs=72.8
Q ss_pred ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEecc---C---CCCCCceEECCCCCEEEEeecCCchhhh
Q 047259 57 FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEH---L---PGGPDNINLAPDGSFWVALIKMNQTGVR 130 (225)
Q Consensus 57 ~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~---~---~g~Pd~i~~d~~G~l~v~~~~~~~~~~~ 130 (225)
......++++|++ ++++-...+.|..+++... .....+. . . ......++++++|+++++.....
T Consensus 186 ~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~--~~~~~~~-~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~----- 255 (397)
T 1sq9_A 186 SQFATSVDISERG--LIATGFNNGTVQISELSTL--RPLYNFE-SQHSMINNSNSIRSVKFSPQGSLLAIAHDSN----- 255 (397)
T ss_dssp CCCCCEEEECTTS--EEEEECTTSEEEEEETTTT--EEEEEEE-CCC---CCCCCEEEEEECSSTTEEEEEEEET-----
T ss_pred CCCceEEEECCCc--eEEEEeCCCcEEEEECCCC--ceeEEEe-ccccccccCCccceEEECCCCCEEEEEecCC-----
Confidence 4567899999998 5555667789999998642 1122222 1 1 33456899999999877765510
Q ss_pred hhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCC--C-------cccceeEEEEe-CCEEEE
Q 047259 131 AIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNA--T-------YISFVTSAVEF-EDNLYM 199 (225)
Q Consensus 131 ~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g--~-------~~~~~t~~~~~-~~~Lyv 199 (225)
..+.|..+|. .++.+..+..+.. . .-..++.+... ++.+++
T Consensus 256 ----------------------------~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 307 (397)
T 1sq9_A 256 ----------------------------SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 307 (397)
T ss_dssp ----------------------------TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE
T ss_pred ----------------------------CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEE
Confidence 0167777775 4777777764210 0 01234455543 444455
Q ss_pred eeCCCCeEEEEeCCCc
Q 047259 200 ASIQSKFVGKLPLNTP 215 (225)
Q Consensus 200 ~~~~~~~i~~~~~~~~ 215 (225)
+....+.|..+++...
T Consensus 308 ~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 308 SAGWDGKLRFWDVKTK 323 (397)
T ss_dssp EEETTSEEEEEETTTT
T ss_pred EEeCCCeEEEEEcCCC
Confidence 5556778888877653
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.38 E-value=0.011 Score=54.70 Aligned_cols=140 Identities=10% Similarity=0.005 Sum_probs=78.7
Q ss_pred cEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC-------------CCEEEEEEecCCCCCceeEEeccCCC
Q 047259 38 GQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW-------------KFRCRRYWLKGPRQGRLESFIEHLPG 104 (225)
Q Consensus 38 g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~-------------~~~I~~~~~~~~~~~~~~~~~~~~~g 104 (225)
..|+.+|.++|+............+++|+|| +.||++... ..+|+++++.+.......++. .+.
T Consensus 189 ~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~--~~~ 265 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA--TPE 265 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC--CTT
T ss_pred EEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec--cCC
Confidence 5799999887876443111111258999999 888777643 235888887543211222322 222
Q ss_pred ---CCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCc--E-EEEEEC
Q 047259 105 ---GPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGK--I-IMDFND 178 (225)
Q Consensus 105 ---~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~--~-~~~~~~ 178 (225)
.-.++.+++||+..+....... . ....|+.+|.++. . ...+..
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~-----------------------------~--~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGT-----------------------------D--PVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTT-----------------------------C--SCCEEEEEEEETTEECCCEEEEC
T ss_pred CCeEEEEEEECCCCCEEEEEEEccC-----------------------------C--CcceEEEEECCCCCCcccEEecC
Confidence 2247889999974333322100 0 0346777776432 2 344443
Q ss_pred CCCCcccceeEEEEeCCEEEEeeCC---CCeEEEEeCCC
Q 047259 179 PNATYISFVTSAVEFEDNLYMASIQ---SKFVGKLPLNT 214 (225)
Q Consensus 179 p~g~~~~~~t~~~~~~~~Lyv~~~~---~~~i~~~~~~~ 214 (225)
+.+.. ...+..++++||+.+.. ..+|.++++++
T Consensus 315 ~~~~~---~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 315 DLKAQ---WDFVDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp SSSSC---EEEEEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred CCCce---EEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 33221 22234678889888653 45699998876
No 210
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.38 E-value=0.021 Score=46.66 Aligned_cols=132 Identities=14% Similarity=0.007 Sum_probs=79.8
Q ss_pred CcEEEEEeCCC-CeE--EEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEE--
Q 047259 37 HGQLLKYDPEL-EET--TVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINL-- 111 (225)
Q Consensus 37 ~g~v~~~d~~~-~~~--~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~-- 111 (225)
.|.|..||..+ +.. ..+.........++|+|+++.|+ +-+..+.|..++++.. ....+. ...+....+++
T Consensus 63 dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~---~~~~~~-~~~~~v~~~~~~~ 137 (368)
T 3mmy_A 63 ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF-TASCDKTAKMWDLSSN---QAIQIA-QHDAPVKTIHWIK 137 (368)
T ss_dssp TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTT---EEEEEE-ECSSCEEEEEEEE
T ss_pred CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE-EEcCCCcEEEEEcCCC---Cceeec-cccCceEEEEEEe
Confidence 56676666553 332 23333455678999999998555 4456789999998652 222222 23334567888
Q ss_pred CCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEE
Q 047259 112 APDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSA 190 (225)
Q Consensus 112 d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~ 190 (225)
+++|+++++... .+.|..+|. .++.+..+..+.. ...+
T Consensus 138 ~~~~~~l~~~~~------------------------------------dg~i~vwd~~~~~~~~~~~~~~~-----~~~~ 176 (368)
T 3mmy_A 138 APNYSCVMTGSW------------------------------------DKTLKFWDTRSSNPMMVLQLPER-----CYCA 176 (368)
T ss_dssp CSSCEEEEEEET------------------------------------TSEEEEECSSCSSCSEEEECSSC-----EEEE
T ss_pred CCCCCEEEEccC------------------------------------CCcEEEEECCCCcEEEEEecCCC-----ceEE
Confidence 888887776655 456777775 4677777775431 2233
Q ss_pred EEeCCEEEEeeCCCCeEEEEeCCCc
Q 047259 191 VEFEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 191 ~~~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
......++++. ..+.+..+++...
T Consensus 177 ~~~~~~~~~~~-~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 177 DVIYPMAVVAT-AERGLIVYQLENQ 200 (368)
T ss_dssp EEETTEEEEEE-GGGCEEEEECSSS
T ss_pred EecCCeeEEEe-CCCcEEEEEeccc
Confidence 34455555544 3456666666654
No 211
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.38 E-value=0.01 Score=54.66 Aligned_cols=141 Identities=9% Similarity=0.085 Sum_probs=81.9
Q ss_pred CcEEEEEeCCC------C--eEEEEecCccccceeEEecCCCEEEEEeCC---CCEEEEEEecCCCCCceeEEeccCC-C
Q 047259 37 HGQLLKYDPEL------E--ETTVLHEGFYFANGVALSKDENFVVVCESW---KFRCRRYWLKGPRQGRLESFIEHLP-G 104 (225)
Q Consensus 37 ~g~v~~~d~~~------~--~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~---~~~I~~~~~~~~~~~~~~~~~~~~~-g 104 (225)
...|+.+|.++ + .++.+...... ..-.+++||+.||+.... ..+|+++++++......+.+..... .
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD 336 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC
Confidence 56889888764 4 45555443322 233688999988877643 4589999987532222344443322 1
Q ss_pred CCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCc
Q 047259 105 GPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATY 183 (225)
Q Consensus 105 ~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~ 183 (225)
...++++.+++.++++.... ....|.+++. +|+.+..+..+.+.
T Consensus 337 ~~~~~~~~~~~~lv~~~~~~----------------------------------g~~~l~~~~~~~g~~~~~l~~~~~~- 381 (710)
T 2xdw_A 337 VLEWVACVRSNFLVLCYLHD----------------------------------VKNTLQLHDLATGALLKIFPLEVGS- 381 (710)
T ss_dssp EEEEEEEETTTEEEEEEEET----------------------------------TEEEEEEEETTTCCEEEEECCCSSE-
T ss_pred eEEEEEEEcCCEEEEEEEEC----------------------------------CEEEEEEEECCCCCEEEecCCCCce-
Confidence 33467777667777766541 1457888887 68877777766442
Q ss_pred ccceeEEEE--eCCEEEEe--e-CCCCeEEEEeCCCcc
Q 047259 184 ISFVTSAVE--FEDNLYMA--S-IQSKFVGKLPLNTPE 216 (225)
Q Consensus 184 ~~~~t~~~~--~~~~Lyv~--~-~~~~~i~~~~~~~~~ 216 (225)
+..+.. ++..|+++ + ..-..|+.+++.+..
T Consensus 382 ---v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 382 ---VVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ---EEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ---EEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 222222 24466654 2 223567777776543
No 212
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.35 E-value=0.0085 Score=49.89 Aligned_cols=85 Identities=7% Similarity=-0.010 Sum_probs=47.6
Q ss_pred CcEEEEEeCCCCeEEE--Eec-CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCc-eeEEeccCCCCCCceEEC
Q 047259 37 HGQLLKYDPELEETTV--LHE-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGR-LESFIEHLPGGPDNINLA 112 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~--~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~-~~~~~~~~~g~Pd~i~~d 112 (225)
.+.+..++..++..+. ... .....+.++|+|+++ ++++-+..+.|..++++...... ...+. ........+++.
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~ 159 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLN-SHTQDVKHVVWH 159 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEEC-CCCSCEEEEEEC
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEec-CcCCCeEEEEEC
Confidence 4444445443343322 223 334568999999998 55566667889888886421111 11221 112234568888
Q ss_pred CCCCEEEEeec
Q 047259 113 PDGSFWVALIK 123 (225)
Q Consensus 113 ~~G~l~v~~~~ 123 (225)
++|++.++...
T Consensus 160 p~~~~l~s~s~ 170 (345)
T 3fm0_A 160 PSQELLASASY 170 (345)
T ss_dssp SSSSCEEEEET
T ss_pred CCCCEEEEEeC
Confidence 88886666544
No 213
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.30 E-value=0.028 Score=46.95 Aligned_cols=102 Identities=10% Similarity=0.057 Sum_probs=64.1
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEE-ecCccccceeEEecCCCEEEEEeCCCCE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVL-HEGFYFANGVALSKDENFVVVCESWKFR 81 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~~~~pnGi~~~~dg~~Lyv~~~~~~~ 81 (225)
+.+++.++|+..+|-+. .|.|..||..+++.... .........++++|+|+ ++++-...+.
T Consensus 68 ~~~~~s~d~~~l~s~s~-----------------Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~-~lasg~~d~~ 129 (354)
T 2pbi_B 68 LCMDWCKDKRRIVSSSQ-----------------DGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGC-AIACGGLDNK 129 (354)
T ss_dssp EEEEECTTSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSS-EEEEESTTSE
T ss_pred EEEEECCCCCEEEEEeC-----------------CCeEEEEECCCCCcceEEecCCCCEEEEEECCCCC-EEEEeeCCCC
Confidence 35677777777776543 67888888765554433 33445678999999998 5566677788
Q ss_pred EEEEEecCCC----CCceeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 82 CRRYWLKGPR----QGRLESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 82 I~~~~~~~~~----~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
|..+++.... ......+. ...+....+++.+++...++...
T Consensus 130 i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~ 174 (354)
T 2pbi_B 130 CSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASG 174 (354)
T ss_dssp EEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEET
T ss_pred EEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeC
Confidence 8888875210 11112222 12233457888888876666554
No 214
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.02 Score=45.84 Aligned_cols=133 Identities=9% Similarity=0.045 Sum_probs=84.2
Q ss_pred CCcEEEEEeCCCCeEEEEec-CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 36 PHGQLLKYDPELEETTVLHE-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
..|.|..+|.. .....+.. .......++++|++. +++-...+.|..+++... .....+. ...+....+++.++
T Consensus 163 ~d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~--~~~~~~~-~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 163 ADKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTG--DVLRTYE-GHESFVYCIKLLPN 236 (313)
T ss_dssp TTSCEEEEETT-EEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTC--CEEEEEE-CCSSCEEEEEECTT
T ss_pred CCCCEEEEecC-ceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCch--hhhhhhh-cCCceEEEEEEecC
Confidence 35677778743 22223322 445678999999986 455566789999998642 1222222 22344578999999
Q ss_pred CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEEe
Q 047259 115 GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVEF 193 (225)
Q Consensus 115 G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~~ 193 (225)
|.++.+. . .+.|..+|. .++.+..+..+.+ .++.+...
T Consensus 237 ~~l~~~~-~------------------------------------dg~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~ 275 (313)
T 3odt_A 237 GDIVSCG-E------------------------------------DRTVRIWSKENGSLKQVITLPAI----SIWSVDCM 275 (313)
T ss_dssp SCEEEEE-T------------------------------------TSEEEEECTTTCCEEEEEECSSS----CEEEEEEC
T ss_pred CCEEEEe-c------------------------------------CCEEEEEECCCCceeEEEeccCc----eEEEEEEc
Confidence 9655433 2 457777885 4788888876544 34555543
Q ss_pred -CCEEEEeeCCCCeEEEEeCCCcc
Q 047259 194 -EDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 194 -~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
++.+ ++....+.|..+++....
T Consensus 276 ~~~~~-~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 276 SNGDI-IVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp TTSCE-EEEETTSCEEEEESCGGG
T ss_pred cCCCE-EEEeCCCcEEEEeCCCCc
Confidence 5564 455567889999887654
No 215
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.28 E-value=0.003 Score=54.95 Aligned_cols=83 Identities=6% Similarity=-0.150 Sum_probs=56.9
Q ss_pred ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEec-cCCCCCCceEECCCCCEEEEeecCCchhhhhhhcC
Q 047259 57 FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIE-HLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSC 135 (225)
Q Consensus 57 ~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~-~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~ 135 (225)
......++|+|++..++++-+.++.|..+++... .. +... ........+++.++|+..++...
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~---~~-~~~~~~~~~~v~~v~wspdg~~lasgs~------------ 212 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET---VK-VCATLPSTVAVTSVCWSPKGKQLAVGKQ------------ 212 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS---EE-EEEEECGGGCEEEEEECTTSSCEEEEET------------
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC---cc-eeeccCCCCceeEEEEcCCCCEEEEEcC------------
Confidence 4567899999984447777777899999998642 11 1111 11234678999999987766655
Q ss_pred hhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECC
Q 047259 136 PDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDP 179 (225)
Q Consensus 136 ~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p 179 (225)
.+.|..+|.+|+....+..+
T Consensus 213 ------------------------dg~v~iwd~~~~~~~~~~~~ 232 (434)
T 2oit_A 213 ------------------------NGTVVQYLPTLQEKKVIPCP 232 (434)
T ss_dssp ------------------------TSCEEEECTTCCEEEEECCC
T ss_pred ------------------------CCcEEEEccCCcccccccCC
Confidence 45678888888777666544
No 216
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.28 E-value=0.015 Score=47.35 Aligned_cols=85 Identities=11% Similarity=0.019 Sum_probs=53.6
Q ss_pred CCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC-
Q 047259 36 PHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP- 113 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~- 113 (225)
..+.|..+|..+++..... ......+.|+++|+++ ++++-+..+.|..+++... ......+. ........+++.+
T Consensus 75 ~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~-~~~~~~~~-~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 75 DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENN-WALEQTFE-GHEHFVMCVAFNPK 151 (304)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGT-TEEEEEEC-CCCSCEEEEEECTT
T ss_pred CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCC-cchhhhhc-ccCCcEEEEEECCC
Confidence 4678888888766654433 3345578999999998 5567777889999998642 01112222 1223345788887
Q ss_pred CCCEEEEeec
Q 047259 114 DGSFWVALIK 123 (225)
Q Consensus 114 ~G~l~v~~~~ 123 (225)
++.++++...
T Consensus 152 ~~~~l~sgs~ 161 (304)
T 2ynn_A 152 DPSTFASGCL 161 (304)
T ss_dssp CTTEEEEEET
T ss_pred CCCEEEEEeC
Confidence 5666666544
No 217
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.27 E-value=0.038 Score=46.54 Aligned_cols=140 Identities=11% Similarity=0.030 Sum_probs=84.7
Q ss_pred CCcEEEEEeCC-CCe-EEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccC------CCCCC
Q 047259 36 PHGQLLKYDPE-LEE-TTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHL------PGGPD 107 (225)
Q Consensus 36 ~~g~v~~~d~~-~~~-~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~------~g~Pd 107 (225)
..|.|..||.. .++ +..+.......+.++|+||++ .+++-+..+.|..+++..+ .....+.... .....
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~--~~~~~~~~~~~~~~~~~~~v~ 302 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTG--HQLQVYNREPDRNDNELPIVT 302 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTT--EEEEEECCCCSSSCCSSCSCS
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCC--cEEEEecccccccccccCceE
Confidence 46677777764 222 333333445678999999998 5677778889999998642 1122222110 01246
Q ss_pred ceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECC-CCCccc
Q 047259 108 NINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDP-NATYIS 185 (225)
Q Consensus 108 ~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p-~g~~~~ 185 (225)
.+++.++|++.++... .+.|...|.. ++.+..+... .+. -.
T Consensus 303 ~~~~s~~g~~l~~g~~------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~h-~~ 345 (380)
T 3iz6_a 303 SVAFSISGRLLFAGYS------------------------------------NGDCYVWDTLLAEMVLNLGTLQNSH-EG 345 (380)
T ss_dssp EEEECSSSSEEEEECT------------------------------------TSCEEEEETTTCCEEEEECCSCSSC-CC
T ss_pred EEEECCCCCEEEEEEC------------------------------------CCCEEEEECCCCceEEEEecccCCC-CC
Confidence 7899999998887655 4556666653 6665555321 121 22
Q ss_pred ceeEEEEe-CCEEEEeeCCCCeEEEEeCCCc
Q 047259 186 FVTSAVEF-EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 186 ~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.++.+... ++.++++....+.|...++.+.
T Consensus 346 ~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 346 RISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred ceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 35555543 5566666667778887777653
No 218
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.27 E-value=0.034 Score=47.41 Aligned_cols=52 Identities=8% Similarity=-0.001 Sum_probs=37.5
Q ss_pred CcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.+.|..||..++...... ......+.+++++|++ ++++-+..+.|..+++..
T Consensus 213 D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred CCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCC
Confidence 678888888766644333 3345567899999998 556666778898888764
No 219
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.26 E-value=0.0083 Score=49.11 Aligned_cols=86 Identities=8% Similarity=0.015 Sum_probs=54.6
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEec---CCCEEEEEeCCCCEEEEEEecCCC-CCceeEEe-ccCCCCCCceEE
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSK---DENFVVVCESWKFRCRRYWLKGPR-QGRLESFI-EHLPGGPDNINL 111 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~---dg~~Lyv~~~~~~~I~~~~~~~~~-~~~~~~~~-~~~~g~Pd~i~~ 111 (225)
.|.|..+|..+++.............++++| +++.|+++ ...+.|..|++.... ........ .........+++
T Consensus 189 d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~ 267 (357)
T 3i2n_A 189 NGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRH 267 (357)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEE
T ss_pred CCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEE
Confidence 6789999988777655555556778999999 88866555 567899999886421 11111000 012233567888
Q ss_pred CCCCC-EEEEeec
Q 047259 112 APDGS-FWVALIK 123 (225)
Q Consensus 112 d~~G~-l~v~~~~ 123 (225)
.++|. ++++...
T Consensus 268 ~~~~~~~l~~~~~ 280 (357)
T 3i2n_A 268 LPQNRELFLTAGG 280 (357)
T ss_dssp ETTEEEEEEEEET
T ss_pred CCCCCcEEEEEeC
Confidence 89887 4444443
No 220
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.26 E-value=0.0067 Score=55.37 Aligned_cols=39 Identities=5% Similarity=-0.180 Sum_probs=27.3
Q ss_pred cEEEEEeCCCCeEEEEecCcc-------------------ccceeEEecCCCEEEEEe
Q 047259 38 GQLLKYDPELEETTVLHEGFY-------------------FANGVALSKDENFVVVCE 76 (225)
Q Consensus 38 g~v~~~d~~~~~~~~~~~~~~-------------------~pnGi~~~~dg~~Lyv~~ 76 (225)
+.|+.+|..+++...+..... ...+++|+|||+.|+++.
T Consensus 134 ~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 478899887776665543321 226899999999887665
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.24 E-value=0.01 Score=54.67 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=74.6
Q ss_pred CcEEEEEeCCCC--eEEEEecCccccceeEEecCCCEEEEEeCC---CCEEEEEEecCCCCCceeEEeccCCCCCCceEE
Q 047259 37 HGQLLKYDPELE--ETTVLHEGFYFANGVALSKDENFVVVCESW---KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINL 111 (225)
Q Consensus 37 ~g~v~~~d~~~~--~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~---~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~ 111 (225)
...||.+|.+++ +++.+......-... ++++|+.||+.... +.+|+++++++......+.+...... -+.+
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~ 333 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ---VLTV 333 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS---CEEE
T ss_pred CcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC---EEEE
Confidence 358899987544 555554433222222 67778878766543 47999999876433334555543222 2255
Q ss_pred CCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCCcccceeEE
Q 047259 112 APDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNATYISFVTSA 190 (225)
Q Consensus 112 d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~~~~~~t~~ 190 (225)
+++|+ |+++.... ....|..++.+|+....+..|... ....+
T Consensus 334 s~~g~~lv~~~~~~----------------------------------g~~~l~~~d~~g~~~~~l~~p~~~---~~~~~ 376 (693)
T 3iuj_A 334 HSGSGYLFAEYMVD----------------------------------ATARVEQFDYEGKRVREVALPGLG---SVSGF 376 (693)
T ss_dssp EEETTEEEEEEEET----------------------------------TEEEEEEECTTSCEEEEECCSSSS---EEEEC
T ss_pred EEECCEEEEEEEEC----------------------------------CeeEEEEEECCCCeeEEeecCCCc---eEEee
Confidence 55565 33333221 145788888888777777655321 11111
Q ss_pred E--EeCCEEEEeeC---CCCeEEEEeCCCc
Q 047259 191 V--EFEDNLYMASI---QSKFVGKLPLNTP 215 (225)
Q Consensus 191 ~--~~~~~Lyv~~~---~~~~i~~~~~~~~ 215 (225)
. ++++.|+++.. .-..|..+++.+.
T Consensus 377 ~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 377 NGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp CCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred ecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 1 12455555432 2256666666543
No 222
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.24 E-value=0.0053 Score=51.18 Aligned_cols=101 Identities=13% Similarity=0.091 Sum_probs=58.8
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEE--E-Eec-CccccceeEEecCCCEEEEEeCCC
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETT--V-LHE-GFYFANGVALSKDENFVVVCESWK 79 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~--~-~~~-~~~~pnGi~~~~dg~~Lyv~~~~~ 79 (225)
.+++.|+|++.+|-.. .+.|..+|..+++.. . +.. ....-..++|+||+++| ++-+..
T Consensus 21 ~l~~sp~g~~las~~~-----------------D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l-~s~s~D 82 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGG-----------------DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYL-ASASFD 82 (345)
T ss_dssp EEEECTTSSCEEEEET-----------------TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEE-EEEETT
T ss_pred EEEECCCCCEEEEEcC-----------------CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEE-EEEECC
Confidence 5677888876666443 455555554444432 1 222 23456889999999855 455566
Q ss_pred CEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 80 FRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 80 ~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
+.|..++.+.........+. ...+....+++.++|+++++...
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~ 125 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSR 125 (345)
T ss_dssp SCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEEC
Confidence 77777776532111122222 12233467899999988777655
No 223
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.21 E-value=0.017 Score=47.42 Aligned_cols=100 Identities=9% Similarity=0.046 Sum_probs=55.7
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCC----
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESW---- 78 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~---- 78 (225)
..+++.+|| ++|+...... . ....+...||.+| +++++.+... .... .++|||+.|+++...
T Consensus 174 ~~~~~spdg-~~~~~~~~~~---~-----~~~~~~~~l~~~d--~~~~~~l~~~-~~~~--~~spdg~~l~~~~~~~~~~ 239 (347)
T 2gop_A 174 SSGIWHRDK-IVVNVPHREI---I-----PQYFKFWDIYIWE--DGKEEKMFEK-VSFY--AVDSDGERILLYGKPEKKY 239 (347)
T ss_dssp CEEEEETTE-EEEEEECCCS---S-----CCSSCCEEEEEEE--TTEEEEEEEE-ESEE--EEEECSSCEEEEECCSSSC
T ss_pred ccccCCCCe-EEEEEecccc---c-----ccccccccEEEeC--CCceEEeccC-ccee--eECCCCCEEEEEEccccCC
Confidence 467788888 7776433100 0 0001156899999 4777776554 2222 339999977665432
Q ss_pred ---CCEEEEEEecCCCCCceeEEeccCCCCCCc-eEECCCCCEEEEeec
Q 047259 79 ---KFRCRRYWLKGPRQGRLESFIEHLPGGPDN-INLAPDGSFWVALIK 123 (225)
Q Consensus 79 ---~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~-i~~d~~G~l~v~~~~ 123 (225)
...|+.++ .+ ....+.......... ++++ +| ++++...
T Consensus 240 ~~~~~~l~~~d-~~----~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~ 281 (347)
T 2gop_A 240 MSEHNKLYIYD-GK----EVMGILDEVDRGVGQAKIKD-GK-VYFTLFE 281 (347)
T ss_dssp CCSSCEEEEEC-SS----CEEESSTTCCSEEEEEEEET-TE-EEEEEEE
T ss_pred ccccceEEEEC-CC----ceEeccccCCcccCCccEEc-Cc-EEEEEec
Confidence 35888887 32 333322222222334 7788 88 7766544
No 224
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.19 E-value=0.006 Score=55.83 Aligned_cols=91 Identities=19% Similarity=0.156 Sum_probs=59.2
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccc----cceeEEecCCCEEEEEeC--
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYF----ANGVALSKDENFVVVCES-- 77 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~----pnGi~~~~dg~~Lyv~~~-- 77 (225)
++...+||+++++.. .+.|+.+|..+++.+.+..+... ...++|||||++|.++..
T Consensus 20 ~~~~s~dg~~~~~~~------------------d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~ 81 (719)
T 1z68_A 20 FPNWISGQEYLHQSA------------------DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYS 81 (719)
T ss_dssp CCEESSSSEEEEECT------------------TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEE
T ss_pred ccEECCCCeEEEEcC------------------CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCc
Confidence 567788887555532 46899999888888777765433 678999999998866543
Q ss_pred ------CCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC
Q 047259 78 ------WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS 116 (225)
Q Consensus 78 ------~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~ 116 (225)
..+.|+.++++++..-.... +......+++.|||+
T Consensus 82 ~~~~~s~~~~i~~~d~~~g~~~~~~~----l~~~~~~~~~SPDG~ 122 (719)
T 1z68_A 82 KLWRYSYTATYYIYDLSNGEFVRGNE----LPRPIQYLCWSPVGS 122 (719)
T ss_dssp ECSSSCEEEEEEEEETTTTEECCSSC----CCSSBCCEEECSSTT
T ss_pred eeEEeecceEEEEEECCCCcccccee----cCcccccceECCCCC
Confidence 24689999887531100011 122244566666665
No 225
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.19 E-value=0.028 Score=51.78 Aligned_cols=84 Identities=11% Similarity=0.061 Sum_probs=52.0
Q ss_pred CcEEEEEeCCCC-eEEEEe-cCccccceeEEec-CCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC
Q 047259 37 HGQLLKYDPELE-ETTVLH-EGFYFANGVALSK-DENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP 113 (225)
Q Consensus 37 ~g~v~~~d~~~~-~~~~~~-~~~~~pnGi~~~~-dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~ 113 (225)
.|.|..||..++ ...... ........++|+| +++ ++++.+..+.|..+++... .....+..........+++.+
T Consensus 118 dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~ 194 (814)
T 3mkq_A 118 DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQS--TPNFTLTTGQERGVNYVDYYP 194 (814)
T ss_dssp TSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCS--SCSEEEECCCTTCCCEEEECC
T ss_pred CCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC--cceeEEecCCCCCEEEEEEEE
Confidence 567777776544 333333 3345578999999 665 5566667789999998642 112222222224456788887
Q ss_pred --CCCEEEEeec
Q 047259 114 --DGSFWVALIK 123 (225)
Q Consensus 114 --~G~l~v~~~~ 123 (225)
+|.++++...
T Consensus 195 ~~~~~~l~~~~~ 206 (814)
T 3mkq_A 195 LPDKPYMITASD 206 (814)
T ss_dssp STTCCEEEEECT
T ss_pred CCCCCEEEEEeC
Confidence 8887776655
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.18 E-value=0.032 Score=46.77 Aligned_cols=126 Identities=13% Similarity=0.115 Sum_probs=76.7
Q ss_pred CCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEecc-CC-CCCCceEECC
Q 047259 36 PHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEH-LP-GGPDNINLAP 113 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~-~~-g~Pd~i~~d~ 113 (225)
..|.|+.+|..+|+..-... .....+++.+ ++.||++.. .+.|+.++.+++ .. .+... .. .......+.
T Consensus 247 ~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~tG---~~-~w~~~~~~~~~~~~~~~~- 317 (376)
T 3q7m_A 247 YNGNLTALDLRSGQIMWKRE-LGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDGG---VT-LWTQSDLLHRLLTSPVLY- 317 (376)
T ss_dssp TTSCEEEEETTTCCEEEEEC-CCCEEEEEEE--TTEEEEEET-TCCEEEEETTTC---CE-EEEECTTTTSCCCCCEEE-
T ss_pred cCcEEEEEECCCCcEEeecc-CCCCCCceEE--CCEEEEEcC-CCeEEEEECCCC---cE-EEeecccCCCcccCCEEE-
Confidence 36789999987776543222 2334556665 456999875 468999998643 22 22211 11 122334443
Q ss_pred CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEE
Q 047259 114 DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVE 192 (225)
Q Consensus 114 ~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~ 192 (225)
+|.||++.. .+.+..+|+ +|+++..+..+.+... +..+.
T Consensus 318 ~~~l~v~~~-------------------------------------~g~l~~~d~~tG~~~~~~~~~~~~~~---~~~~~ 357 (376)
T 3q7m_A 318 NGNLVVGDS-------------------------------------EGYLHWINVEDGRFVAQQKVDSSGFQ---TEPVA 357 (376)
T ss_dssp TTEEEEECT-------------------------------------TSEEEEEETTTCCEEEEEECCTTCBC---SCCEE
T ss_pred CCEEEEEeC-------------------------------------CCeEEEEECCCCcEEEEEecCCCcce---eCCEE
Confidence 578888763 357888996 5898887776433322 22344
Q ss_pred eCCEEEEeeCCCCeEEEEe
Q 047259 193 FEDNLYMASIQSKFVGKLP 211 (225)
Q Consensus 193 ~~~~Lyv~~~~~~~i~~~~ 211 (225)
.+++||+++.. +.|..++
T Consensus 358 ~~~~l~v~~~~-G~l~~~~ 375 (376)
T 3q7m_A 358 ADGKLLIQAKD-GTVYSIT 375 (376)
T ss_dssp ETTEEEEEBTT-SCEEEEE
T ss_pred ECCEEEEEeCC-CEEEEEe
Confidence 68999999754 6677664
No 227
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.17 E-value=0.061 Score=44.07 Aligned_cols=52 Identities=17% Similarity=0.125 Sum_probs=38.4
Q ss_pred CcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.+.|..+|..+++..... ........++++|+++ ++++-+..+.|..+++++
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTS
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Confidence 678888888777654433 3345568899999998 556777778898888864
No 228
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.009 Score=49.52 Aligned_cols=85 Identities=18% Similarity=0.094 Sum_probs=55.5
Q ss_pred CcEEEEEeCCCCeEEEEec--CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 37 HGQLLKYDPELEETTVLHE--GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~--~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
.|.|..+|..+++...... .......++++||++ ++++-...+.|..+++...... ...+.....+....+++.++
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTT
T ss_pred CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCC
Confidence 6788888887776644432 223478899999998 5555567789999998753111 02232112334568899999
Q ss_pred CCEEEEeec
Q 047259 115 GSFWVALIK 123 (225)
Q Consensus 115 G~l~v~~~~ 123 (225)
|.+.++...
T Consensus 226 g~~l~s~~~ 234 (343)
T 3lrv_A 226 GYWMVVECD 234 (343)
T ss_dssp SSEEEEEES
T ss_pred CCEEEEEeC
Confidence 987777654
No 229
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.12 E-value=0.02 Score=48.41 Aligned_cols=87 Identities=7% Similarity=-0.065 Sum_probs=59.9
Q ss_pred CCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEe-CCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 36 PHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCE-SWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~-~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
..+.|..||..+++.............++|+|+++.|+++. ...+.|..+++..........+. ...+....+++.++
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~d 360 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPD 360 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTT
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEec-CCCCCEEEEEECCC
Confidence 37889999987777665555566789999999999776653 36789999998642111111111 22345678999999
Q ss_pred CCEEEEeec
Q 047259 115 GSFWVALIK 123 (225)
Q Consensus 115 G~l~v~~~~ 123 (225)
|.+.++...
T Consensus 361 g~~l~s~~~ 369 (401)
T 4aez_A 361 GRILSTAAS 369 (401)
T ss_dssp SSEEEEECT
T ss_pred CCEEEEEeC
Confidence 997777655
No 230
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.037 Score=44.20 Aligned_cols=83 Identities=11% Similarity=0.070 Sum_probs=47.6
Q ss_pred CcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCc-eeEEeccCCCCCCceEECCC
Q 047259 37 HGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGR-LESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~-~~~~~~~~~g~Pd~i~~d~~ 114 (225)
.|.|..||..+++..... ........++++|+++.|+.+ ..++.|..+++....... ...+. ........+++ +
T Consensus 38 dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~ 113 (313)
T 3odt_A 38 DGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFG-GKDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSF--Q 113 (313)
T ss_dssp TSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEE--E
T ss_pred CCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEe-cCCCeEEEEEeeecCCCCcccchh-hcccCEEEEEe--c
Confidence 677888887656544433 345567899999999855554 456788888875421111 22221 11222345666 4
Q ss_pred CCEEEEeec
Q 047259 115 GSFWVALIK 123 (225)
Q Consensus 115 G~l~v~~~~ 123 (225)
++++++...
T Consensus 114 ~~~l~~~~~ 122 (313)
T 3odt_A 114 DGVVISGSW 122 (313)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEEeC
Confidence 555555544
No 231
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.12 E-value=0.0029 Score=52.73 Aligned_cols=86 Identities=8% Similarity=-0.103 Sum_probs=48.2
Q ss_pred CcEEEEEeCCCCe----EEEEec-CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCC-------------ceeEE
Q 047259 37 HGQLLKYDPELEE----TTVLHE-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQG-------------RLESF 98 (225)
Q Consensus 37 ~g~v~~~d~~~~~----~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~-------------~~~~~ 98 (225)
.+.|..+|..+++ ...+.. .......++++|+++.| ++-+..+.|..+++...... ..+..
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (377)
T 3dwl_C 121 ARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL-AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVC 199 (377)
T ss_dssp SSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE-EEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEE
T ss_pred CCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE-EEEeCCCEEEEEEEEecccCCCccccccccccchhhhh
Confidence 5667777765443 233333 44567899999999855 45555678888887521100 01111
Q ss_pred ec-cCCCCCCceEECCCCCEEEEeec
Q 047259 99 IE-HLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 99 ~~-~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
.. ...+....++++++|+++++...
T Consensus 200 ~~~~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 200 AEYPSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp ECCCCSSSEEEEEECTTSSCEEEEET
T ss_pred hcccCCceEEEEEECCCCCEEEEEeC
Confidence 11 11223467889999986666554
No 232
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.11 E-value=0.047 Score=46.27 Aligned_cols=67 Identities=12% Similarity=0.087 Sum_probs=41.9
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCe------------EEEEecCc------------cc
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEE------------TTVLHEGF------------YF 59 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~------------~~~~~~~~------------~~ 59 (225)
.+++.++|++.++-.. .|.|..|+..+++ ...+.... ..
T Consensus 33 ~v~~s~~g~~la~g~~-----------------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 95 (447)
T 3dw8_B 33 TVEFNHSGELLATGDK-----------------GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEK 95 (447)
T ss_dssp EEEECSSSSEEEEEET-----------------TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCC
T ss_pred EEEECCCCCEEEEEcC-----------------CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCc
Confidence 5677888877666443 5667666655443 22222222 44
Q ss_pred cceeEEecCC--CEEEEEeCCCCEEEEEEec
Q 047259 60 ANGVALSKDE--NFVVVCESWKFRCRRYWLK 88 (225)
Q Consensus 60 pnGi~~~~dg--~~Lyv~~~~~~~I~~~~~~ 88 (225)
.+.++|+|++ . ++++-+..+.|..+++.
T Consensus 96 V~~l~~~~~~~~~-~l~s~s~d~~i~iw~~~ 125 (447)
T 3dw8_B 96 INKIRWLPQKNAA-QFLLSTNDKTIKLWKIS 125 (447)
T ss_dssp CCEEEECCCCSSS-EEEEEECSSCEEEEEEE
T ss_pred eEEEEEcCCCCcc-eEEEeCCCCeEEEEecc
Confidence 6889999998 5 44555677888888775
No 233
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.11 E-value=0.0041 Score=51.11 Aligned_cols=84 Identities=12% Similarity=-0.024 Sum_probs=55.4
Q ss_pred CcEEEEEeCCCCeEEEEec-CccccceeEEec-CCCEEEEEeCCCCEEEEEEecCCCCCceeEEe--ccCCCCCCceEEC
Q 047259 37 HGQLLKYDPELEETTVLHE-GFYFANGVALSK-DENFVVVCESWKFRCRRYWLKGPRQGRLESFI--EHLPGGPDNINLA 112 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~-dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~--~~~~g~Pd~i~~d 112 (225)
.|.|..||..+++...... .......++|+| +++ ++++-...+.|..+++... .....+. .........++++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTD--TLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTT--EEEEEECSTTSCSSCEEEEEEC
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecC--eEEEEecccccccCceeEEEEC
Confidence 6789999987666544443 455678999999 777 5556566789999998642 1222221 1123345688899
Q ss_pred CCCCEEEEeec
Q 047259 113 PDGSFWVALIK 123 (225)
Q Consensus 113 ~~G~l~v~~~~ 123 (225)
++|++.++...
T Consensus 171 ~~~~~l~~~~~ 181 (366)
T 3k26_A 171 LLGEKIMSCGM 181 (366)
T ss_dssp TTSSEEEEEET
T ss_pred CCCCEEEEecC
Confidence 98887666554
No 234
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.10 E-value=0.0087 Score=51.44 Aligned_cols=84 Identities=12% Similarity=0.086 Sum_probs=53.7
Q ss_pred CCcEEEEEeCCCCeEEEEe---cCccccceeEEec-CCCEEEEEeCCCCEEEEEEecCCCCCceeEEecc--CCCCCCce
Q 047259 36 PHGQLLKYDPELEETTVLH---EGFYFANGVALSK-DENFVVVCESWKFRCRRYWLKGPRQGRLESFIEH--LPGGPDNI 109 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~---~~~~~pnGi~~~~-dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~--~~g~Pd~i 109 (225)
..|.|..||..+++..... .....-+.|+|+| |++ ++++-+.++.|..+++++. ....+... .......+
T Consensus 140 ~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~-~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~ 215 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTN-QFYASSMEGTTRLQDFKGN---ILRVFASSDTINIWFCSL 215 (435)
T ss_dssp TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTT-EEEEECSSSCEEEEETTSC---EEEEEECCSSCSCCCCCE
T ss_pred CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCC-EEEEEeCCCEEEEeeccCC---ceeEEeccCCCCccEEEE
Confidence 3678888887655433332 2234568999998 566 5667777889999988652 33334322 11223568
Q ss_pred EECCCCCEEEEeec
Q 047259 110 NLAPDGSFWVALIK 123 (225)
Q Consensus 110 ~~d~~G~l~v~~~~ 123 (225)
+++++|.+.++...
T Consensus 216 ~~~~~~~~l~~g~~ 229 (435)
T 4e54_B 216 DVSASSRMVVTGDN 229 (435)
T ss_dssp EEETTTTEEEEECS
T ss_pred EECCCCCEEEEEeC
Confidence 88999988777654
No 235
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.09 E-value=0.026 Score=52.62 Aligned_cols=99 Identities=13% Similarity=0.048 Sum_probs=56.0
Q ss_pred cEEEc-CCCc-EEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCC-eEEEEecCcc-ccceeEEecCCCEEEEEeCC-
Q 047259 4 DVIEA-SDGS-LYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELE-ETTVLHEGFY-FANGVALSKDENFVVVCESW- 78 (225)
Q Consensus 4 dv~~~-~dG~-iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-~~~~~~~~~~-~pnGi~~~~dg~~Lyv~~~~- 78 (225)
++.+. |||+ |.|+.+.. +.....|+.+|.++| +. +...+. ...+++|+|||+.||++...
T Consensus 178 ~~~~S~PDG~~lAy~~~~~-------------G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMS-------------GNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp EEEECTTTTCEEEEEEESS-------------SSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEECT
T ss_pred eeEecCCCCCEEEEEEeCC-------------CCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEECC
Confidence 35677 8885 55554420 112346999998877 52 111121 24589999999878666542
Q ss_pred ---CCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCE
Q 047259 79 ---KFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSF 117 (225)
Q Consensus 79 ---~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l 117 (225)
..+|+++++.++......++.......--++.+++||+.
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~ 284 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT 284 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSE
T ss_pred CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCE
Confidence 147888888653222223332111122235678899974
No 236
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.09 E-value=0.044 Score=44.95 Aligned_cols=84 Identities=12% Similarity=0.114 Sum_probs=51.0
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCC-----EEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEE
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDEN-----FVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINL 111 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~-----~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~ 111 (225)
.+.|..+|.+...+..+.........+++.|.+. .++++-...+.|..+++... .....+.. .......+++
T Consensus 128 D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~-h~~~v~~~~~ 204 (319)
T 3frx_A 128 DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF--QIEADFIG-HNSNINTLTA 204 (319)
T ss_dssp TSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT--EEEEEECC-CCSCEEEEEE
T ss_pred CCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc--hhheeecC-CCCcEEEEEE
Confidence 5667777776444444444445567788887532 25667777889999988642 11122221 2233467899
Q ss_pred CCCCCEEEEeec
Q 047259 112 APDGSFWVALIK 123 (225)
Q Consensus 112 d~~G~l~v~~~~ 123 (225)
.++|++.++...
T Consensus 205 sp~g~~l~s~~~ 216 (319)
T 3frx_A 205 SPDGTLIASAGK 216 (319)
T ss_dssp CTTSSEEEEEET
T ss_pred cCCCCEEEEEeC
Confidence 999998777655
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.07 E-value=0.042 Score=46.01 Aligned_cols=132 Identities=9% Similarity=0.087 Sum_probs=72.1
Q ss_pred CcEEEEEeCCCCeEEE--EecC---------ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCC
Q 047259 37 HGQLLKYDPELEETTV--LHEG---------FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGG 105 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~--~~~~---------~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~ 105 (225)
.+.|+.+|.++|+..- -... ......++.+ ++.||+... .+.|+.++.+++ +. .+....++.
T Consensus 62 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~-~g~l~a~d~~tG---~~-~W~~~~~~~ 134 (376)
T 3q7m_A 62 AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS--GGHVYIGSE-KAQVYALNTSDG---TV-AWQTKVAGE 134 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE--TTEEEEEET-TSEEEEEETTTC---CE-EEEEECSSC
T ss_pred CCeEEEEEccCCceeeeecCccccccccccCcccccCceEe--CCEEEEEcC-CCEEEEEECCCC---CE-EEEEeCCCc
Confidence 4689999987776432 1211 1112334443 346888764 479999998642 21 121112211
Q ss_pred C-CceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCc
Q 047259 106 P-DNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATY 183 (225)
Q Consensus 106 P-d~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~ 183 (225)
. ....++ +|.+|++.. .+.|..+|+ +|+++..+..+....
T Consensus 135 ~~~~p~~~-~~~v~v~~~-------------------------------------~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 135 ALSRPVVS-DGLVLIHTS-------------------------------------NGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp CCSCCEEE-TTEEEEECT-------------------------------------TSEEEEEETTTCCEEEEEECCC---
T ss_pred eEcCCEEE-CCEEEEEcC-------------------------------------CCeEEEEECCCCcEEEEEeCCCCce
Confidence 1 122333 578888653 357888997 588887776532210
Q ss_pred -ccceeEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 047259 184 -ISFVTSAVEFEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 184 -~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
....+..+..++.||++.. +..|..+++.+
T Consensus 177 ~~~~~~~~~~~~~~v~~g~~-~g~l~~~d~~t 207 (376)
T 3q7m_A 177 SLRGESAPTTAFGAAVVGGD-NGRVSAVLMEQ 207 (376)
T ss_dssp --CCCCCCEEETTEEEECCT-TTEEEEEETTT
T ss_pred eecCCCCcEEECCEEEEEcC-CCEEEEEECCC
Confidence 0111223345788888753 46777777643
No 238
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.07 E-value=0.012 Score=54.60 Aligned_cols=106 Identities=12% Similarity=0.094 Sum_probs=62.7
Q ss_pred CcEEEEEeCCCC--e-EEEEecCccccceeEEecCCCEEEEEeCC---CCEEEEEEecCCCCCceeEEeccCCCCCCceE
Q 047259 37 HGQLLKYDPELE--E-TTVLHEGFYFANGVALSKDENFVVVCESW---KFRCRRYWLKGPRQGRLESFIEHLPGGPDNIN 110 (225)
Q Consensus 37 ~g~v~~~d~~~~--~-~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~---~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~ 110 (225)
...|+.+|.+++ + ++.+.......... +++||+.||+.... +.+|+++++++.. +..+.++........+++
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~ 370 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVG 370 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEE
Confidence 568898887656 4 55655443333333 45889888776542 5689999987522 234444432222234556
Q ss_pred ECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECC
Q 047259 111 LAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDP 179 (225)
Q Consensus 111 ~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p 179 (225)
++ ++.++++.... ....|+.++.+|+....+..|
T Consensus 371 ~~-~~~lv~~~~~d----------------------------------g~~~l~~~~~~g~~~~~l~~~ 404 (741)
T 1yr2_A 371 IA-GNRLFASYIHD----------------------------------AKSQVLAFDLDGKPAGAVSLP 404 (741)
T ss_dssp EE-BTEEEEEEEET----------------------------------TEEEEEEEETTSCEEEECBCS
T ss_pred EE-CCEEEEEEEEC----------------------------------CEEEEEEEeCCCCceeeccCC
Confidence 65 45666665441 145777888777766666654
No 239
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.06 E-value=0.0077 Score=49.16 Aligned_cols=99 Identities=13% Similarity=0.003 Sum_probs=62.0
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCe----EEEEecCccccceeEEecCCC-EEEEEeC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEE----TTVLHEGFYFANGVALSKDEN-FVVVCES 77 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~----~~~~~~~~~~pnGi~~~~dg~-~Lyv~~~ 77 (225)
..+++.++|++.++-.. .|.|..|+..+++ .............++|+|+++ .|+.+.
T Consensus 15 ~~~~~s~~~~~l~~~~~-----------------d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~- 76 (342)
T 1yfq_A 15 SDIKIIPSKSLLLITSW-----------------DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT- 76 (342)
T ss_dssp EEEEEEGGGTEEEEEET-----------------TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-
T ss_pred EEEEEcCCCCEEEEEcC-----------------CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc-
Confidence 35677778776665433 4666666654444 444444456678999999998 666555
Q ss_pred CCCEEEEEEe-cCCCCCceeEEecc-CCCCCCceEECCCCCEEEEeec
Q 047259 78 WKFRCRRYWL-KGPRQGRLESFIEH-LPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 78 ~~~~I~~~~~-~~~~~~~~~~~~~~-~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
..+.|..+++ ++. ....+... .......+++.+ ++++++...
T Consensus 77 ~dg~i~~wd~~~~~---~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~ 120 (342)
T 1yfq_A 77 VQGEILKVDLIGSP---SFQALTNNEANLGICRICKYG-DDKLIAASW 120 (342)
T ss_dssp TTSCEEEECSSSSS---SEEECBSCCCCSCEEEEEEET-TTEEEEEET
T ss_pred CCCeEEEEEeccCC---ceEeccccCCCCceEEEEeCC-CCEEEEEcC
Confidence 5679999998 653 22333210 223346788888 777666655
No 240
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.06 E-value=0.068 Score=44.56 Aligned_cols=84 Identities=12% Similarity=0.093 Sum_probs=53.4
Q ss_pred CCcEEEEEeCCCCeEEEEecC-ccccceeEEec--CCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEEC
Q 047259 36 PHGQLLKYDPELEETTVLHEG-FYFANGVALSK--DENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLA 112 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~--dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d 112 (225)
..|.|..+|..+++......+ ......++++| +++ ++++-+..+.|..+++... .....+. ........+++.
T Consensus 174 ~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~--~~~~~~~-~h~~~v~~v~~~ 249 (354)
T 2pbi_B 174 GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSG--QCVQAFE-THESDVNSVRYY 249 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC-EEEEEETTSCEEEEETTTC--CEEEEEC-CCSSCEEEEEEC
T ss_pred CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCC--cEEEEec-CCCCCeEEEEEe
Confidence 367888888877765444433 33456777876 455 5566667789999998642 1122232 222335678999
Q ss_pred CCCCEEEEeec
Q 047259 113 PDGSFWVALIK 123 (225)
Q Consensus 113 ~~G~l~v~~~~ 123 (225)
++|+++++...
T Consensus 250 p~~~~l~s~s~ 260 (354)
T 2pbi_B 250 PSGDAFASGSD 260 (354)
T ss_dssp TTSSEEEEEET
T ss_pred CCCCEEEEEeC
Confidence 99988777655
No 241
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.02 E-value=0.023 Score=47.26 Aligned_cols=85 Identities=24% Similarity=0.216 Sum_probs=54.5
Q ss_pred CCCcEEEEEeCCCCeEEEEecCccccceeEEec-CCCEEE-EEeCCC----CEEEEEEecCCCCCceeEEeccCCC-CCC
Q 047259 35 KPHGQLLKYDPELEETTVLHEGFYFANGVALSK-DENFVV-VCESWK----FRCRRYWLKGPRQGRLESFIEHLPG-GPD 107 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~-dg~~Ly-v~~~~~----~~I~~~~~~~~~~~~~~~~~~~~~g-~Pd 107 (225)
.....|+.+|..+++.+.+.........++|+| |++.|+ +++... .+|+.+++++. ..+.+....+. .+.
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~~~~~~~~ 241 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS---NVRKIKEHAEGESCT 241 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC---CCEESSCCCTTEEEE
T ss_pred CCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC---ceeEeeccCCCcccc
Confidence 345689999988888777765556678899999 787564 444222 48999998653 22222221111 245
Q ss_pred ceEECCCCC-EEEEee
Q 047259 108 NINLAPDGS-FWVALI 122 (225)
Q Consensus 108 ~i~~d~~G~-l~v~~~ 122 (225)
.+++.++|+ |+++..
T Consensus 242 ~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEECTTSSCEEEEEE
T ss_pred ceEECCCCCEEEEEec
Confidence 678999997 555443
No 242
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.01 E-value=0.057 Score=48.66 Aligned_cols=84 Identities=11% Similarity=0.050 Sum_probs=54.5
Q ss_pred CcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEec------cCCCCCCce
Q 047259 37 HGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIE------HLPGGPDNI 109 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~------~~~g~Pd~i 109 (225)
.+.|..+|..+++......+ ....+.++|+|||+ ++++-+.++.|..++...+ .....+.. ...+....+
T Consensus 169 D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~-~las~s~D~~i~lwd~~~g--~~~~~~~~~~~~~~~h~~~V~~v 245 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDG--TKTGVFEDDSLKNVAHSGSVFGL 245 (611)
T ss_dssp TSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC--CEEEECBCTTSSSCSSSSCEEEE
T ss_pred CCeEEEEECCCCeEeeeeccccCceEEEEECCCCC-EEEEEECCCcEEEEECCCC--cEeeeeccccccccccCCCEEEE
Confidence 56677777665554444433 45678999999998 6667777889999987532 11122211 112345689
Q ss_pred EECCCCCEEEEeec
Q 047259 110 NLAPDGSFWVALIK 123 (225)
Q Consensus 110 ~~d~~G~l~v~~~~ 123 (225)
++.++|++.++...
T Consensus 246 ~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 246 TWSPDGTKIASASA 259 (611)
T ss_dssp EECTTSSEEEEEET
T ss_pred EECCCCCEEEEEeC
Confidence 99999998877655
No 243
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.01 E-value=0.017 Score=52.86 Aligned_cols=53 Identities=21% Similarity=0.070 Sum_probs=37.2
Q ss_pred CCcEEEEEeCCCCeEEEEe-cCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 36 PHGQLLKYDPELEETTVLH-EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~-~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
..|.|..+|..+++..... ........++++||++. +++-+..+.|..++..+
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLG 503 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTS
T ss_pred CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCC
Confidence 3678888888766554433 33455688999999984 45666778888887643
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.01 E-value=0.067 Score=49.27 Aligned_cols=52 Identities=10% Similarity=0.151 Sum_probs=36.1
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEEeCCEEEEeeCC-----------------CCeEEEEeCC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQ-----------------SKFVGKLPLN 213 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~-----------------~~~i~~~~~~ 213 (225)
.+.+..+|.. |+++..+..+.+. ...+... ..+|+.||+... .+.+..|.+.
T Consensus 497 dg~l~a~D~~tG~~lw~~~~~~~~-~~~p~~y-~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 497 DGRLVAYHAATGEKLWEAPTGTGV-VAAPSTY-MVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred CCcEEEEECCCCceeeeeeCCCCc-ccCCEEE-EeCCEEEEEEeccCCccccccccccccCCCCeEEEEecc
Confidence 5688899974 9999999887653 3223222 367888887522 4888999887
No 245
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.11 Score=42.64 Aligned_cols=85 Identities=13% Similarity=0.021 Sum_probs=50.4
Q ss_pred CcEEEEEeCCCCeEEEE---ecCccccceeEEecC--CCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEE
Q 047259 37 HGQLLKYDPELEETTVL---HEGFYFANGVALSKD--ENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINL 111 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~---~~~~~~pnGi~~~~d--g~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~ 111 (225)
.|.|..||..+++...+ .........++|+|+ ++.| ++-...+.|..+++..........+. ........+++
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~v~~~~~ 155 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL-LVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASW 155 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEECCTTSCCCEEEEE-CCTTCEEEEEE
T ss_pred CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEE-EEecCCCcEEEEecCCCCceeeEEec-CCCCceEEEEE
Confidence 56677777665653222 233456789999999 7744 55556789999998753222222222 12223456777
Q ss_pred CC-------------CCCEEEEeec
Q 047259 112 AP-------------DGSFWVALIK 123 (225)
Q Consensus 112 d~-------------~G~l~v~~~~ 123 (225)
.+ +|.++++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGA 180 (379)
T ss_dssp CCCC----------CTTCEEEEEET
T ss_pred cCccccccccccCCCCCCEEEEEeC
Confidence 77 5776666554
No 246
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.083 Score=43.54 Aligned_cols=84 Identities=13% Similarity=0.122 Sum_probs=50.5
Q ss_pred CCcEEEEEeCCCCeEE--EEec-CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCC-CCceeEEeccCCCCCC---c
Q 047259 36 PHGQLLKYDPELEETT--VLHE-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPR-QGRLESFIEHLPGGPD---N 108 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~--~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~-~~~~~~~~~~~~g~Pd---~ 108 (225)
..|.|..||..+++.. .+.. .....+.++|+|+++.|..+. .+.|..+++.... ......+. ....+- .
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~ 265 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYT--IPEFKTGTVT 265 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCB--C-----CCEE
T ss_pred CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccc--cccccccceE
Confidence 3678888887766533 2222 345678999999998776665 3489999986421 11111110 011232 3
Q ss_pred eEECCCCCEEEEeec
Q 047259 109 INLAPDGSFWVALIK 123 (225)
Q Consensus 109 i~~d~~G~l~v~~~~ 123 (225)
++++++|++.++..+
T Consensus 266 ~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSN 280 (343)
T ss_dssp EEECTTSSEEEEEET
T ss_pred EEECCCCCEEEEecC
Confidence 999999998777544
No 247
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.035 Score=47.22 Aligned_cols=141 Identities=7% Similarity=0.026 Sum_probs=84.8
Q ss_pred CcEEEEEeCCCCeEEEEec---CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceE---
Q 047259 37 HGQLLKYDPELEETTVLHE---GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNIN--- 110 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~---~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~--- 110 (225)
.|.|..+|..+++...... .......++++|+++.| ++-+..+.|..+++... .....+.-........++
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVL-ILGTTRGIIDIWDIRFN--VLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEE-EEEETTSCEEEEETTTT--EEEEEEBCTTCEEEEEEEECT
T ss_pred CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEE-EEEcCCCeEEEEEcCCc--cEEEEEecCCCCceEEEEecc
Confidence 6889999987776554443 34567899999999855 45556688999998642 111122100111123453
Q ss_pred -ECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCC------
Q 047259 111 -LAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNAT------ 182 (225)
Q Consensus 111 -~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~------ 182 (225)
+.++|.+.++... .+.|...|.. |+.+..+....+.
T Consensus 268 ~~s~~~~~l~s~~~------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 311 (437)
T 3gre_A 268 FYGKNSVIVVGGSS------------------------------------KTFLTIWNFVKGHCQYAFINSDEQPSMEHF 311 (437)
T ss_dssp TTCTTEEEEEEEST------------------------------------TEEEEEEETTTTEEEEEEESSSSCCCGGGG
T ss_pred ccCCCccEEEEEcC------------------------------------CCcEEEEEcCCCcEEEEEEcCCCCCcccee
Confidence 3345655555544 4566666654 6666666532211
Q ss_pred ----------------cccceeEEEEeCCEEEEeeCCCCeEEEEeCCCcc
Q 047259 183 ----------------YISFVTSAVEFEDNLYMASIQSKFVGKLPLNTPE 216 (225)
Q Consensus 183 ----------------~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~~ 216 (225)
....++.+...++.++++....+.|...++....
T Consensus 312 ~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 312 LPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp SCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGG
T ss_pred cccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcc
Confidence 0122455566677888888888999999987654
No 248
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.96 E-value=0.038 Score=53.67 Aligned_cols=99 Identities=9% Similarity=0.012 Sum_probs=60.7
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec-CccccceeEEecCCCEEEEEeCCCCEE
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE-GFYFANGVALSKDENFVVVCESWKFRC 82 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I 82 (225)
.+++.++|+..++-.. .|.|..||..+++...... .......++|+||+++| ++-+.++.|
T Consensus 620 ~~~~s~~~~~l~s~~~-----------------d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~d~~v 681 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGA-----------------DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYI-ATCSADKKV 681 (1249)
T ss_dssp EEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEE
T ss_pred EEEECCCCCEEEEEeC-----------------CCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEE-EEEeCCCeE
Confidence 4667777776666433 6788888887666544443 34556889999999855 455567899
Q ss_pred EEEEecCCCCCceeEEeccCCCCCCceEECCCC--CEEEEeec
Q 047259 83 RRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG--SFWVALIK 123 (225)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G--~l~v~~~~ 123 (225)
..+++.++ .....+. ...+....+++.+++ .+.++...
T Consensus 682 ~vwd~~~~--~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~ 721 (1249)
T 3sfz_A 682 KIWDSATG--KLVHTYD-EHSEQVNCCHFTNKSNHLLLATGSN 721 (1249)
T ss_dssp EEEETTTC--CEEEEEE-CCSSCEEEEEECSSSSCCEEEEEET
T ss_pred EEEECCCC--ceEEEEc-CCCCcEEEEEEecCCCceEEEEEeC
Confidence 99998642 1222332 222334567777743 34444433
No 249
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.96 E-value=0.0098 Score=57.24 Aligned_cols=81 Identities=14% Similarity=-0.006 Sum_probs=53.3
Q ss_pred CcEEEEEeCCCCeEEEEecCcc-ccceeEEecCCCEEEEEeCCCCEEE-EEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 37 HGQLLKYDPELEETTVLHEGFY-FANGVALSKDENFVVVCESWKFRCR-RYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~-~pnGi~~~~dg~~Lyv~~~~~~~I~-~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
.+.|+.++..+++...+..... ....++|+ ||+.|+++.. .++|+ .+++++. ....+. .....+..++++++
T Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~---~~~~l~-~~~~~~~~~~~SpD 389 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTG---KAEKFE-ENLGNVFAMGVDRN 389 (1045)
T ss_dssp TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTC---CEEECC-CCCCSEEEEEECTT
T ss_pred cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCC---CceEec-CCccceeeeEECCC
Confidence 3578888877676655443333 67789999 9987766554 67898 8887652 232322 22234568999999
Q ss_pred CCEEEEeec
Q 047259 115 GSFWVALIK 123 (225)
Q Consensus 115 G~l~v~~~~ 123 (225)
|+..+....
T Consensus 390 G~~la~~~~ 398 (1045)
T 1k32_A 390 GKFAVVAND 398 (1045)
T ss_dssp SSEEEEEET
T ss_pred CCEEEEECC
Confidence 986665433
No 250
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.96 E-value=0.017 Score=48.12 Aligned_cols=152 Identities=11% Similarity=0.076 Sum_probs=85.7
Q ss_pred CcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--------------cCccccceeEEec
Q 047259 3 NDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--------------EGFYFANGVALSK 67 (225)
Q Consensus 3 ndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--------------~~~~~pnGi~~~~ 67 (225)
+.+++.+ +|++.++-.. .|.|..||..+++..... ........++|+|
T Consensus 47 ~~~~~s~~~~~~l~~~~~-----------------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 109 (408)
T 4a11_B 47 NTLDIEPVEGRYMLSGGS-----------------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYP 109 (408)
T ss_dssp EEEEECTTTCCEEEEEET-----------------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECT
T ss_pred EEEEEecCCCCEEEEEcC-----------------CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEcc
Confidence 4577888 8877776443 567777776544321111 1334568899999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECC---CCCEEEEeecCCchhhhhhhcChhHHHHHHh
Q 047259 68 DENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAP---DGSFWVALIKMNQTGVRAIQSCPDKWKLLQA 144 (225)
Q Consensus 68 dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~---~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~ 144 (225)
++..++++....+.|..+++... ....... .......+++.+ ++.+.++...
T Consensus 110 ~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 164 (408)
T 4a11_B 110 HDTGMFTSSSFDKTLKVWDTNTL---QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTR--------------------- 164 (408)
T ss_dssp TCTTCEEEEETTSEEEEEETTTT---EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEES---------------------
T ss_pred CCCcEEEEEeCCCeEEEeeCCCC---ccceecc-CCCceeeeEeecCCCCCcEEEEEcC---------------------
Confidence 44336666667789999998642 2211111 223334555555 3445555544
Q ss_pred hhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccceeEEEEe--CCEEEEeeCCCCeEEEEeCCCc
Q 047259 145 YPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEF--EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 145 ~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~--~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.|..+|.. ++.+..+....+ .++.+... +..++++....+.|..+++...
T Consensus 165 ---------------~~~v~~~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 165 ---------------GPKVQLCDLKSGSCSHILQGHRQ----EILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp ---------------SSSEEEEESSSSCCCEEECCCCS----CEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred ---------------CCeEEEEeCCCcceeeeecCCCC----cEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 3345555543 555556654333 24444443 3336666667778888877654
No 251
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.94 E-value=0.038 Score=45.15 Aligned_cols=138 Identities=10% Similarity=0.021 Sum_probs=80.5
Q ss_pred CcEEEEEeCCCCeEEEEec------CccccceeEEecC----CCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCC
Q 047259 37 HGQLLKYDPELEETTVLHE------GFYFANGVALSKD----ENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGP 106 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~------~~~~pnGi~~~~d----g~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~P 106 (225)
.+.|..||..+++...... .......++|+|+ ++ ++++-...+.|..+++... .....+. ......
T Consensus 43 ~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~--~~~~~~~-~~~~~i 118 (366)
T 3k26_A 43 SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHP-LLAVAGSRGIIRIINPITM--QCIKHYV-GHGNAI 118 (366)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCE-EEEEEETTCEEEEECTTTC--CEEEEEE-SCCSCE
T ss_pred CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCC-EEEEecCCCEEEEEEchhc--eEeeeec-CCCCcE
Confidence 4566667665443222222 2234688999999 44 5556666789999988642 1222232 223345
Q ss_pred CceEECC-CCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcc
Q 047259 107 DNINLAP-DGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYI 184 (225)
Q Consensus 107 d~i~~d~-~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~ 184 (225)
..+++.+ +++++++... .+.|...|.+ ++.+..+..-.+. -
T Consensus 119 ~~~~~~~~~~~~l~s~~~------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~-~ 161 (366)
T 3k26_A 119 NELKFHPRDPNLLLSVSK------------------------------------DHALRLWNIQTDTLVAIFGGVEGH-R 161 (366)
T ss_dssp EEEEECSSCTTEEEEEET------------------------------------TSCEEEEETTTTEEEEEECSTTSC-S
T ss_pred EEEEECCCCCCEEEEEeC------------------------------------CCeEEEEEeecCeEEEEecccccc-c
Confidence 7889999 8887777655 3455666654 6666666321111 1
Q ss_pred cceeEEEEe-CCEEEEeeCCCCeEEEEeCCCc
Q 047259 185 SFVTSAVEF-EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 185 ~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
..++.+... ++.++++....+.|..+++...
T Consensus 162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 162 DEVLSADYDLLGEKIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESCSH
T ss_pred CceeEEEECCCCCEEEEecCCCCEEEEECCCC
Confidence 235555543 4445555556788988888754
No 252
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.92 E-value=0.042 Score=44.78 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=58.8
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEe--cCccccceeEEecC---CCEEEEEeC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLH--EGFYFANGVALSKD---ENFVVVCES 77 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~pnGi~~~~d---g~~Lyv~~~ 77 (225)
+++++.++|..+++-.+. ....|.|..||..+++..... ........++|+|+ ++.| ++-.
T Consensus 22 ~~~~~~p~~~~l~~~~s~-------------~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~ 87 (357)
T 3i2n_A 22 FDCKWVPCSAKFVTMGNF-------------ARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYL-ATGD 87 (357)
T ss_dssp EEEEECTTSSEEEEEEC---------------CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCE-EEEE
T ss_pred EEEEEcCCCceEEEecCc-------------cCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceE-EEec
Confidence 467788888544432220 012577877777666654432 33445688999998 5644 4555
Q ss_pred CCCEEEEEEecCCCCCceeEEeccCCCCCCce------EECCCCCEEEEeec
Q 047259 78 WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNI------NLAPDGSFWVALIK 123 (225)
Q Consensus 78 ~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i------~~d~~G~l~v~~~~ 123 (225)
..+.|..+++.... .....+.. ..+....+ ++.++|++.++...
T Consensus 88 ~dg~i~iwd~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~s~~~~~l~~~~~ 137 (357)
T 3i2n_A 88 FGGNLHIWNLEAPE-MPVYSVKG-HKEIINAIDGIGGLGIGEGAPEIVTGSR 137 (357)
T ss_dssp TTSCEEEECTTSCS-SCSEEECC-CSSCEEEEEEESGGGCC-CCCEEEEEET
T ss_pred CCCeEEEEeCCCCC-ccEEEEEe-cccceEEEeeccccccCCCccEEEEEeC
Confidence 67889999887531 12223321 11212233 56788887776654
No 253
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.92 E-value=0.047 Score=45.34 Aligned_cols=88 Identities=11% Similarity=0.088 Sum_probs=54.5
Q ss_pred CCCcEEEEEeCCCCeEEEEec-CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEe--------------
Q 047259 35 KPHGQLLKYDPELEETTVLHE-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFI-------------- 99 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~-------------- 99 (225)
...|.|..+|..+++...... .......++++|+++.++++-...+.|..+++.... .....+.
T Consensus 163 ~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 163 TRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS-GCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp ESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS-CCSEECCTTTTCSCCCTTTSS
T ss_pred cCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC-cccccccccccccceeecccc
Confidence 346778888876555433333 345568999999998777777788899999986421 0111110
Q ss_pred ccCCCCCCceEECCCCCEEEEeec
Q 047259 100 EHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 100 ~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
....+....+++.++|++.++...
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEET
T ss_pred ccccCceeEEEEcCCCCEEEEecC
Confidence 001123457888888886665544
No 254
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.91 E-value=0.03 Score=53.90 Aligned_cols=81 Identities=14% Similarity=0.184 Sum_probs=55.9
Q ss_pred CcEEE-EEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCC
Q 047259 37 HGQLL-KYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDG 115 (225)
Q Consensus 37 ~g~v~-~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G 115 (225)
.+.++ .++..+++.+.+.........++|+|||++|+++.. .+.|+.++++++ ..........+....+++++||
T Consensus 357 ~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg---~~~~~~~~~~~~v~~~~~SpDG 432 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND-RFEIMTVDLETG---KPTVIERSREAMITDFTISDNS 432 (1045)
T ss_dssp TEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEET-TSEEEEEETTTC---CEEEEEECSSSCCCCEEECTTS
T ss_pred CCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECC-CCeEEEEECCCC---ceEEeccCCCCCccceEECCCC
Confidence 35788 888876776666544466789999999998876654 569999998753 3333332233344789999999
Q ss_pred CEEEEe
Q 047259 116 SFWVAL 121 (225)
Q Consensus 116 ~l~v~~ 121 (225)
+..+..
T Consensus 433 ~~la~~ 438 (1045)
T 1k32_A 433 RFIAYG 438 (1045)
T ss_dssp CEEEEE
T ss_pred CeEEEE
Confidence 855444
No 255
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.89 E-value=0.051 Score=48.93 Aligned_cols=52 Identities=13% Similarity=0.064 Sum_probs=36.7
Q ss_pred CcEEEEEeCCCCeEEEEe--------cCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLH--------EGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~--------~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.+.|..+|..+++..... .......+++|+|||+ ++++-+.++.|..+++..
T Consensus 211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVAT 270 (611)
T ss_dssp TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT
T ss_pred CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCC
Confidence 667778887666654433 2234568999999998 456666778999898764
No 256
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.1 Score=42.68 Aligned_cols=85 Identities=8% Similarity=0.072 Sum_probs=50.2
Q ss_pred CcEEEEEeCCCCe---EEEEecCccccceeEEec-------------CCCEEEEEeCCCCEEEEEEecCCCCC-ce-eEE
Q 047259 37 HGQLLKYDPELEE---TTVLHEGFYFANGVALSK-------------DENFVVVCESWKFRCRRYWLKGPRQG-RL-ESF 98 (225)
Q Consensus 37 ~g~v~~~d~~~~~---~~~~~~~~~~pnGi~~~~-------------dg~~Lyv~~~~~~~I~~~~~~~~~~~-~~-~~~ 98 (225)
.|.|..+|..++. ...+.........++++| |++ ++++-...+.|..+++...... .. ..+
T Consensus 124 d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 202 (379)
T 3jrp_A 124 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTL 202 (379)
T ss_dssp TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEE
T ss_pred CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEE
Confidence 5677777765442 222233445568899999 677 5555556788999988742111 11 111
Q ss_pred eccCCCCCCceEECCC---CCEEEEeec
Q 047259 99 IEHLPGGPDNINLAPD---GSFWVALIK 123 (225)
Q Consensus 99 ~~~~~g~Pd~i~~d~~---G~l~v~~~~ 123 (225)
. ...+....+++.++ |+++++...
T Consensus 203 ~-~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 203 E-GHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp C-CCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred e-cccCcEeEEEECCCCCCCCeEEEEeC
Confidence 1 12234568899998 776666554
No 257
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.85 E-value=0.056 Score=45.78 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=62.8
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC-CeEEEEe--------cCccccceeEEecCC-CEE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL-EETTVLH--------EGFYFANGVALSKDE-NFV 72 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-~~~~~~~--------~~~~~pnGi~~~~dg-~~L 72 (225)
+.+++.++|+++++- . .|.|..+|..+ ++..... ......+.++|+|++ + +
T Consensus 181 ~~~~~~~~~~~l~s~-~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~ 241 (447)
T 3dw8_B 181 NSISINSDYETYLSA-D-----------------DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN-T 241 (447)
T ss_dssp CEEEECTTSSEEEEE-C-----------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT-E
T ss_pred EEEEEcCCCCEEEEe-C-----------------CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc-E
Confidence 456777777766663 2 67888888762 2222111 223446899999998 6 6
Q ss_pred EEEeCCCCEEEEEEecCCCC--CceeEEeccCC-----------CCCCceEECCCCCEEEEeec
Q 047259 73 VVCESWKFRCRRYWLKGPRQ--GRLESFIEHLP-----------GGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 73 yv~~~~~~~I~~~~~~~~~~--~~~~~~~~~~~-----------g~Pd~i~~d~~G~l~v~~~~ 123 (225)
+++-+..+.|..+++..... .....+..... +....+++.++|+++++...
T Consensus 242 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 242 FVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp EEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred EEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 66666778999999875321 11233332111 13467899999998776544
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.82 E-value=0.15 Score=46.31 Aligned_cols=62 Identities=16% Similarity=0.240 Sum_probs=42.4
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEEeCCEEEEeeCC-----------------------------------
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQ----------------------------------- 203 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~----------------------------------- 203 (225)
.+.+..+|.+ |+++-.+..+.+. ...+... ..+|++||+...
T Consensus 493 dg~l~A~D~~tG~~lW~~~l~~g~-~~~P~~y-~~~G~qyv~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (599)
T 1w6s_A 493 DGYLKARDSDTGDLLWKFKIPSGA-IGYPMTY-THKGTQYVAIYYGVGGWPGVGLVFDLADPTAGLGAVGAFKKLANYTQ 570 (599)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEEECCCTTTTHHHHHTCCCTTCGGGHHHHTTTGGGTCC
T ss_pred CCeEEEEECCCCCEEEEeeCCCCc-EeccEEE-EeCCEEEEEEEccCCcccccccccccccccccccccccccccccccC
Confidence 4678889875 9999888887654 3333222 368899987532
Q ss_pred -CCeEEEEeCCCcccccCCCC
Q 047259 204 -SKFVGKLPLNTPEAELAPKA 223 (225)
Q Consensus 204 -~~~i~~~~~~~~~~~~~~~~ 223 (225)
.++|.+|.|+.+.+-.-|++
T Consensus 571 ~g~~~~~f~l~~~~~~~~~~~ 591 (599)
T 1w6s_A 571 MGGGVVVFSLDGKGPYDDPNV 591 (599)
T ss_dssp CCCEEEEEEETTCCTTSSTTT
T ss_pred CCCEEEEEEcCCCCCccCccc
Confidence 36899999987666554443
No 259
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.81 E-value=0.054 Score=52.62 Aligned_cols=83 Identities=13% Similarity=0.106 Sum_probs=52.4
Q ss_pred CcEEEEEeCCCCeEEEEecC--------------ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccC
Q 047259 37 HGQLLKYDPELEETTVLHEG--------------FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHL 102 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~--------------~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~ 102 (225)
.|.|..||..+++....... ......++++|||+.+.++. .+.|..+++... .....+....
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~--~~~~~~~~~~ 839 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA--KNKVLLFDIHTS--GLLAEIHTGH 839 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEETTTC--CEEEEEECSS
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc--CCcEEEEEecCC--CceeEEcCCC
Confidence 56777777655543322211 12456899999999777765 478999988642 1222222123
Q ss_pred CCCCCceEECCCCCEEEEeec
Q 047259 103 PGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 103 ~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
.+....+++.++|++.++...
T Consensus 840 ~~~v~~~~~sp~~~~l~~~~~ 860 (1249)
T 3sfz_A 840 HSTIQYCDFSPYDHLAVIALS 860 (1249)
T ss_dssp SSCCCEEEECSSTTEEEEECS
T ss_pred CCceEEEEEcCCCCEEEEEeC
Confidence 345678999999998877655
No 260
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.81 E-value=0.1 Score=48.09 Aligned_cols=146 Identities=12% Similarity=0.066 Sum_probs=84.1
Q ss_pred CCcEEEEEeCCC---C---eEEEEec------CccccceeEEecCCCEEE-EEeCCC--CEEEEEEecCCC----CCcee
Q 047259 36 PHGQLLKYDPEL---E---ETTVLHE------GFYFANGVALSKDENFVV-VCESWK--FRCRRYWLKGPR----QGRLE 96 (225)
Q Consensus 36 ~~g~v~~~d~~~---~---~~~~~~~------~~~~pnGi~~~~dg~~Ly-v~~~~~--~~I~~~~~~~~~----~~~~~ 96 (225)
+...|+.+|.++ + +...+.. ...+...++|+|||+.++ +..+.. ..|+.++++++. .....
T Consensus 226 ~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~ 305 (740)
T 4a5s_A 226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVAR 305 (740)
T ss_dssp CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGG
T ss_pred CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEE
Confidence 345789999887 6 5555432 344567889999998443 333332 368888887532 01111
Q ss_pred EEe-ccCCC-----CCCceEECCCCCEEE-EeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC
Q 047259 97 SFI-EHLPG-----GPDNINLAPDGSFWV-ALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH 169 (225)
Q Consensus 97 ~~~-~~~~g-----~Pd~i~~d~~G~l~v-~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~ 169 (225)
.+. +...+ .+...++.+||+.++ .... +. ....|..+|.+
T Consensus 306 ~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~-~~--------------------------------G~~~l~~~~~~ 352 (740)
T 4a5s_A 306 QHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN-EE--------------------------------GYRHICYFQID 352 (740)
T ss_dssp CEEEECSSSCSSSSSCCCCEECTTSSEEEEEEEC-TT--------------------------------SCEEEEEEETT
T ss_pred EeeeccCCceEccCcCCCceEcCCCCEEEEEEEc-CC--------------------------------CceEEEEEECC
Confidence 221 11111 145788999998433 2222 10 14578888888
Q ss_pred CcEEEEEECCCCCcccceeEEEEeCCEEEEeeCC------CCeEEEEeCCCccc
Q 047259 170 GKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQ------SKFVGKLPLNTPEA 217 (225)
Q Consensus 170 G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~------~~~i~~~~~~~~~~ 217 (225)
|.....+...... + ......+++.||+.+.. ...|+++++++...
T Consensus 353 ~~~~~~lT~g~~~-v--~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~ 403 (740)
T 4a5s_A 353 KKDCTFITKGTWE-V--IGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTK 403 (740)
T ss_dssp CSSCEESCCSSSC-E--EEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEE
T ss_pred CCceEecccCCEE-E--EEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCc
Confidence 7655555532222 1 11122458889988765 34788888876543
No 261
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.79 E-value=0.023 Score=47.90 Aligned_cols=84 Identities=13% Similarity=0.044 Sum_probs=53.3
Q ss_pred CcEEEEEeCCCCeEEEEecC--------ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEe---ccCCCC
Q 047259 37 HGQLLKYDPELEETTVLHEG--------FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFI---EHLPGG 105 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~--------~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~---~~~~g~ 105 (225)
.|.|..+|..+++....... ......++|+|+|+.| ++-..++.|..++.... .....+. ....+.
T Consensus 270 D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~g~~dg~i~vwd~~~~--~~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 270 DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLL-FAGYSNGDCYVWDTLLA--EMVLNLGTLQNSHEGR 346 (380)
T ss_dssp SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEE-EEECTTSCEEEEETTTC--CEEEEECCSCSSCCCC
T ss_pred CCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEE-EEEECCCCEEEEECCCC--ceEEEEecccCCCCCc
Confidence 67888888876665443322 1235789999999855 55566789999987532 1111121 112234
Q ss_pred CCceEECCCCCEEEEeec
Q 047259 106 PDNINLAPDGSFWVALIK 123 (225)
Q Consensus 106 Pd~i~~d~~G~l~v~~~~ 123 (225)
...+++.++|.++++...
T Consensus 347 v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 347 ISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp CCEEEECSSSSEEEEECT
T ss_pred eEEEEECCCCCEEEEeeC
Confidence 578899999998777654
No 262
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.65 E-value=0.021 Score=52.36 Aligned_cols=106 Identities=12% Similarity=0.104 Sum_probs=63.5
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeC---CCCEEEEEEecCCCCCceeEEeccCC-CCCCceEEC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCES---WKFRCRRYWLKGPRQGRLESFIEHLP-GGPDNINLA 112 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~---~~~~I~~~~~~~~~~~~~~~~~~~~~-g~Pd~i~~d 112 (225)
...||.++..+++++.+...........+ +||+ +|+... ..++|+++++++......+.+....+ ....+++++
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE
Confidence 45888888766677666654444445555 6777 776654 35799999986532222344443221 123456666
Q ss_pred CCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECC
Q 047259 113 PDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDP 179 (225)
Q Consensus 113 ~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p 179 (225)
++.++++.... ....|+.++.+|+....+..|
T Consensus 329 -~~~lv~~~~~d----------------------------------g~~~l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 329 -GGHLSLEYLKD----------------------------------ATSEVRVATLKGKPVRTVQLP 360 (695)
T ss_dssp -TTEEEEEEEET----------------------------------TEEEEEEEETTCCEEEECCCS
T ss_pred -CCEEEEEEEEC----------------------------------CEEEEEEEeCCCCeeEEecCC
Confidence 56777665541 156778888777766666554
No 263
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.63 E-value=0.0061 Score=55.44 Aligned_cols=70 Identities=19% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEe
Q 047259 2 TNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCE 76 (225)
Q Consensus 2 pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~ 76 (225)
|..|+++++|+||++.++...... .........++.+++.+|++..++.+ .+-..|++|+||+++|||+-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~-----~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAG-----DFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSG-----GGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccc-----cccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 677999999999999876321111 11223466789999988998887644 35567999999999999873
No 264
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.62 E-value=0.0091 Score=51.33 Aligned_cols=87 Identities=16% Similarity=0.102 Sum_probs=53.1
Q ss_pred CCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEec--cCCCCCCceEEC
Q 047259 35 KPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIE--HLPGGPDNINLA 112 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~--~~~g~Pd~i~~d 112 (225)
...|.|..+|.+++.+..+.......+.|+|+|+++.++++-+..+.|..+++..... ...+.. ........++++
T Consensus 228 ~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~--~~~~~~~~~h~~~v~~~~~s 305 (435)
T 4e54_B 228 DNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG--KASFLYSLPHRHPVNAACFS 305 (435)
T ss_dssp CSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS--SSCCSBCCBCSSCEEECCBC
T ss_pred eCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccc--cceEEEeeeccccccceeEC
Confidence 3467788888764433333233345688999999987887877788888888864211 111111 111223567888
Q ss_pred CCCCEEEEeec
Q 047259 113 PDGSFWVALIK 123 (225)
Q Consensus 113 ~~G~l~v~~~~ 123 (225)
++|++.++...
T Consensus 306 pdg~~l~s~~~ 316 (435)
T 4e54_B 306 PDGARLLTTDQ 316 (435)
T ss_dssp TTSSEEEEEES
T ss_pred CCCCeeEEEcC
Confidence 88887666544
No 265
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.14 Score=41.99 Aligned_cols=64 Identities=11% Similarity=0.016 Sum_probs=40.2
Q ss_pred cccceeEEecCCCEEEEEeCCCCEEEEEEecC-CCCCc-eeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 58 YFANGVALSKDENFVVVCESWKFRCRRYWLKG-PRQGR-LESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 58 ~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~-~~~~~-~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
.....++|+||++ ++++-+..+.|..++++. ..... ...+. ........+++.++|+++++...
T Consensus 108 ~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 108 NEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQ-EHSQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp -CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEEEEECSSSSEEEEEET
T ss_pred CcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEec-cCCCceEEEEECCCCCEEEEEcC
Confidence 4567899999998 455666678898898842 11111 12222 12233467888999987777654
No 266
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.57 E-value=0.08 Score=48.85 Aligned_cols=68 Identities=19% Similarity=0.295 Sum_probs=46.2
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccc------cceeEEecCCCEEEEEeC
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYF------ANGVALSKDENFVVVCES 77 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~------pnGi~~~~dg~~Lyv~~~ 77 (225)
.+...+||.+++++ .|.|+.+|..+++.+.+..+... .+.+++||||+.|+++..
T Consensus 21 ~~~w~~dg~~~~~~-------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~ 81 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ-------------------ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYN 81 (740)
T ss_dssp CEEECSSSEEEEEE-------------------TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEE
T ss_pred ccEECCCCcEEEEc-------------------CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEEC
Confidence 46777788766663 25889999888887776554322 245889999998766543
Q ss_pred C--------CCEEEEEEecCC
Q 047259 78 W--------KFRCRRYWLKGP 90 (225)
Q Consensus 78 ~--------~~~I~~~~~~~~ 90 (225)
. .+.++.++++++
T Consensus 82 ~~~~~r~~~~~~~~~~d~~~~ 102 (740)
T 4a5s_A 82 YVKQWRHSYTASYDIYDLNKR 102 (740)
T ss_dssp EEECSSSCEEEEEEEEETTTT
T ss_pred CeeeEEEccceEEEEEECCCC
Confidence 1 256778888753
No 267
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.56 E-value=0.065 Score=43.49 Aligned_cols=80 Identities=10% Similarity=0.062 Sum_probs=50.2
Q ss_pred CcEEEEEeC-CCCeEEEEec--CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCC------Cc-eeEEeccCCCCC
Q 047259 37 HGQLLKYDP-ELEETTVLHE--GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQ------GR-LESFIEHLPGGP 106 (225)
Q Consensus 37 ~g~v~~~d~-~~~~~~~~~~--~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~------~~-~~~~~~~~~g~P 106 (225)
.|.|..||. .+++...+.. .......++++| ++ ++++-...+.|..+++..... +. ...+ ..++.+
T Consensus 78 dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~v 153 (342)
T 1yfq_A 78 QGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--KVKNKI 153 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--SSCCCE
T ss_pred CCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEE--eeCCce
Confidence 678888888 7777766555 555678999999 77 455556678999998753000 01 1111 123445
Q ss_pred CceEECCCCCEEEEe
Q 047259 107 DNINLAPDGSFWVAL 121 (225)
Q Consensus 107 d~i~~d~~G~l~v~~ 121 (225)
..+++.+++ ++++.
T Consensus 154 ~~~~~~~~~-l~~~~ 167 (342)
T 1yfq_A 154 FTMDTNSSR-LIVGM 167 (342)
T ss_dssp EEEEECSSE-EEEEE
T ss_pred EEEEecCCc-EEEEe
Confidence 678888776 54443
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.54 E-value=0.13 Score=46.42 Aligned_cols=42 Identities=21% Similarity=0.405 Sum_probs=28.2
Q ss_pred ceEEEEECC-CCcEEEEEECCCCCcccceeEEEEeCCEEEEeeCC
Q 047259 160 GARIVKVDT-HGKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQ 203 (225)
Q Consensus 160 ~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~ 203 (225)
.+.|..+|. +|+++..+..+.+. ...+. +...+|++||+...
T Consensus 484 dg~l~a~D~~tG~~lw~~~~~~~~-~~~p~-~~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 484 DGYLKALDNKDGKELWNFKMPSGG-IGSPM-TYSFKGKQYIGSMY 526 (571)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCC-CSCCE-EEEETTEEEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCCc-EeeeE-EEEECCEEEEEEEC
Confidence 467888996 49999888876542 22222 22368999998653
No 269
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.53 E-value=0.076 Score=49.26 Aligned_cols=75 Identities=13% Similarity=0.011 Sum_probs=44.4
Q ss_pred CcEEEEEeCCCCeEEE---EecCccccceeEEecC--CCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEE
Q 047259 37 HGQLLKYDPELEETTV---LHEGFYFANGVALSKD--ENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINL 111 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~---~~~~~~~pnGi~~~~d--g~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~ 111 (225)
.|.|..+|..+++... ..........++++|+ ++ ++++-+..+.|..+++..........+. ..+.....+++
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~~~~~-~~~~~v~~l~~ 153 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASW 153 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCCEEEE-CCSSCEEEEEE
T ss_pred CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcceeEee-cCCCceEEEEe
Confidence 5677777766565322 2234456789999999 87 4455566789999998753112222222 22333456666
Q ss_pred CC
Q 047259 112 AP 113 (225)
Q Consensus 112 d~ 113 (225)
.+
T Consensus 154 ~p 155 (753)
T 3jro_A 154 AP 155 (753)
T ss_dssp CC
T ss_pred cC
Confidence 66
No 270
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.52 E-value=0.21 Score=45.49 Aligned_cols=83 Identities=16% Similarity=0.172 Sum_probs=50.8
Q ss_pred CcEEEEEeCCCC-----eE-EEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceE
Q 047259 37 HGQLLKYDPELE-----ET-TVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNIN 110 (225)
Q Consensus 37 ~g~v~~~d~~~~-----~~-~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~ 110 (225)
.|.|..++..++ .. ..+.........++++||++ +.++-+..+.|..+++... .....+.. ..+....++
T Consensus 404 D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~-~l~sgs~Dg~v~vwd~~~~--~~~~~~~~-h~~~v~~~~ 479 (694)
T 3dm0_A 404 DKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ-FALSGSWDGELRLWDLAAG--VSTRRFVG-HTKDVLSVA 479 (694)
T ss_dssp TSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTT--EEEEEEEC-CSSCEEEEE
T ss_pred CCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC-EEEEEeCCCcEEEEECCCC--cceeEEeC-CCCCEEEEE
Confidence 566666664321 22 22333445568899999998 5566667789999998642 12223332 223346788
Q ss_pred ECCCCCEEEEeec
Q 047259 111 LAPDGSFWVALIK 123 (225)
Q Consensus 111 ~d~~G~l~v~~~~ 123 (225)
+.++|+..++...
T Consensus 480 ~s~~~~~l~s~s~ 492 (694)
T 3dm0_A 480 FSLDNRQIVSASR 492 (694)
T ss_dssp ECTTSSCEEEEET
T ss_pred EeCCCCEEEEEeC
Confidence 9999887766654
No 271
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.47 E-value=0.11 Score=43.35 Aligned_cols=87 Identities=13% Similarity=0.030 Sum_probs=55.7
Q ss_pred CCCCcEEEEEeCCCCe-----------------EEEEecCccccceeEEecCCCEEEEEeCCCCE-EEEEEecCCCCCce
Q 047259 34 GKPHGQLLKYDPELEE-----------------TTVLHEGFYFANGVALSKDENFVVVCESWKFR-CRRYWLKGPRQGRL 95 (225)
Q Consensus 34 ~~~~g~v~~~d~~~~~-----------------~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~-I~~~~~~~~~~~~~ 95 (225)
+...|.|..+|..+++ +..+.......+.++|+|||+ ++++-+..+. |..+++... ...
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~--~~~ 231 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDG--VLV 231 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTC--CEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCC--cEE
Confidence 4557788888876544 333334445668999999998 5566666776 888888642 122
Q ss_pred eEEecc-CCCCCCceEECCCCCEEEEeec
Q 047259 96 ESFIEH-LPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 96 ~~~~~~-~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
..+... ..+....++++++|++.++...
T Consensus 232 ~~~~~g~h~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 232 REFRRGLDRADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp EEEECTTCCSCEEEEEECTTSCEEEEEET
T ss_pred EEEEcCCCCCcEEEEEECCCCCEEEEEEC
Confidence 333311 2334567899999998777655
No 272
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.42 E-value=0.2 Score=42.79 Aligned_cols=124 Identities=14% Similarity=0.011 Sum_probs=75.1
Q ss_pred CCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 36 PHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
..|.|..+|..+++......+ ......++++ ++ .+++-+.++.|..+++... . ..+..........+++.++
T Consensus 330 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-~l~s~s~dg~v~vwd~~~~---~-~~~~~~~~~~~~~~~~~~~ 402 (464)
T 3v7d_B 330 MDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DK-FLVSAAADGSIRGWDANDY---S-RKFSYHHTNLSAITTFYVS 402 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SS-EEEEEETTSEEEEEETTTC---C-EEEEEECTTCCCEEEEEEC
T ss_pred CCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CC-EEEEEeCCCcEEEEECCCC---c-eeeeecCCCCccEEEEEeC
Confidence 367888889877765554433 3445678887 34 5566667789999998642 1 2222122334556788888
Q ss_pred CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEEe
Q 047259 115 GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVEF 193 (225)
Q Consensus 115 G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~~ 193 (225)
|++.++... +.|...|. .|+.+..+..+.. ..+..+...
T Consensus 403 ~~~l~~~~d-------------------------------------g~i~iwd~~~g~~~~~~~~~~~---~~v~~v~~~ 442 (464)
T 3v7d_B 403 DNILVSGSE-------------------------------------NQFNIYNLRSGKLVHANILKDA---DQIWSVNFK 442 (464)
T ss_dssp SSEEEEEET-------------------------------------TEEEEEETTTCCEEESCTTTTC---SEEEEEEEE
T ss_pred CCEEEEecC-------------------------------------CeEEEEECCCCcEEehhhccCC---CcEEEEEec
Confidence 887776543 34555564 4777654333222 245666667
Q ss_pred CCEEEEeeCCCCe
Q 047259 194 EDNLYMASIQSKF 206 (225)
Q Consensus 194 ~~~Lyv~~~~~~~ 206 (225)
++.|+++...++.
T Consensus 443 ~~~l~~~~~~~g~ 455 (464)
T 3v7d_B 443 GKTLVAAVEKDGQ 455 (464)
T ss_dssp TTEEEEEEEETTE
T ss_pred CCEEEEEEEeCCe
Confidence 8888777655443
No 273
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.40 E-value=0.31 Score=40.01 Aligned_cols=63 Identities=17% Similarity=0.272 Sum_probs=42.1
Q ss_pred ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 57 FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 57 ~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
...-+.++++|+++ +.++-+..+.|..+++... .....+.. ..+....+++.++|+..++...
T Consensus 76 ~~~V~~~~~~~~~~-~l~s~s~D~~v~lwd~~~~--~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~ 138 (343)
T 2xzm_R 76 NHFVSDLALSQENC-FAISSSWDKTLRLWDLRTG--TTYKRFVG-HQSEVYSVAFSPDNRQILSAGA 138 (343)
T ss_dssp SSCEEEEEECSSTT-EEEEEETTSEEEEEETTSS--CEEEEEEC-CCSCEEEEEECSSTTEEEEEET
T ss_pred CCceEEEEECCCCC-EEEEEcCCCcEEEEECCCC--cEEEEEcC-CCCcEEEEEECCCCCEEEEEcC
Confidence 34568899999998 5567777889999998642 12223332 2233467899999987766554
No 274
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.36 E-value=0.071 Score=44.47 Aligned_cols=69 Identities=13% Similarity=-0.008 Sum_probs=49.3
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcE-EEEEeCCCCeEEEEec---CccccceeEEecCCCEEEEEeCC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQ-LLKYDPELEETTVLHE---GFYFANGVALSKDENFVVVCESW 78 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~-v~~~d~~~~~~~~~~~---~~~~pnGi~~~~dg~~Lyv~~~~ 78 (225)
+.+++.++|++.+|-+. .|. |..+|..+++...... .....+.++|+||++. +++-+.
T Consensus 199 ~~~~~s~~g~~l~s~s~-----------------d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~-l~s~s~ 260 (355)
T 3vu4_A 199 KMVRLNRKSDMVATCSQ-----------------DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSK-LAVVSD 260 (355)
T ss_dssp EEEEECTTSSEEEEEET-----------------TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCE-EEEEET
T ss_pred EEEEECCCCCEEEEEeC-----------------CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCE-EEEEEC
Confidence 45777888877777554 566 8888887676544443 3455689999999984 455566
Q ss_pred CCEEEEEEecC
Q 047259 79 KFRCRRYWLKG 89 (225)
Q Consensus 79 ~~~I~~~~~~~ 89 (225)
.+.|..+++..
T Consensus 261 d~~v~iw~~~~ 271 (355)
T 3vu4_A 261 KWTLHVFEIFN 271 (355)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEccC
Confidence 78999998864
No 275
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.35 E-value=0.12 Score=42.43 Aligned_cols=83 Identities=11% Similarity=-0.013 Sum_probs=44.5
Q ss_pred CcEEEEEeCC-CC---eE-EEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEE
Q 047259 37 HGQLLKYDPE-LE---ET-TVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINL 111 (225)
Q Consensus 37 ~g~v~~~d~~-~~---~~-~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~ 111 (225)
.+.|..+|.. .+ +. ..+.......+.++|+|+++ ++++-+..+.|..++...........+. ...+....+++
T Consensus 128 D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~ 205 (330)
T 2hes_X 128 DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDF 205 (330)
T ss_dssp TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEE
T ss_pred CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEe
Confidence 5667777762 12 22 22223345578999999998 5566667788888876532111112222 12222345677
Q ss_pred CCC--CCEEEEe
Q 047259 112 APD--GSFWVAL 121 (225)
Q Consensus 112 d~~--G~l~v~~ 121 (225)
.++ +.+.++.
T Consensus 206 ~~~~~~~~l~s~ 217 (330)
T 2hes_X 206 DKTEGVFRLCSG 217 (330)
T ss_dssp CCSSSSCEEEEE
T ss_pred cCCCCeeEEEEE
Confidence 776 4444443
No 276
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.31 E-value=0.32 Score=39.13 Aligned_cols=83 Identities=12% Similarity=0.018 Sum_probs=51.4
Q ss_pred CCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 36 PHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
..+.|..+|..+++......+ ....+.|+++||++ ++++-..++.|..+++... .....+. .......+++.++
T Consensus 193 ~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~--~~~~~~~--~~~~v~~~~~~~~ 267 (340)
T 4aow_A 193 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEG--KHLYTLD--GGDIINALCFSPN 267 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTT--EEEEEEE--CSSCEEEEEECSS
T ss_pred CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccC--ceeeeec--CCceEEeeecCCC
Confidence 355677788776665554433 34458899999998 4455566789999988642 1111221 2223456777887
Q ss_pred CCEEEEeec
Q 047259 115 GSFWVALIK 123 (225)
Q Consensus 115 G~l~v~~~~ 123 (225)
+.+..+...
T Consensus 268 ~~~~~~~~d 276 (340)
T 4aow_A 268 RYWLCAATG 276 (340)
T ss_dssp SSEEEEEET
T ss_pred CceeeccCC
Confidence 776665533
No 277
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.28 E-value=0.12 Score=46.85 Aligned_cols=116 Identities=11% Similarity=0.029 Sum_probs=70.9
Q ss_pred ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCC----CCCCceEECCCCCEEEEeecCCchhhhhh
Q 047259 57 FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLP----GGPDNINLAPDGSFWVALIKMNQTGVRAI 132 (225)
Q Consensus 57 ~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~----g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~ 132 (225)
..+...++|+|||++| .+-+.++.|..++.++ ....+. +.. ..-..+++.+||++.++...
T Consensus 85 ~~~V~~vawSPdG~~L-As~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~--------- 149 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWM-AVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE--------- 149 (588)
T ss_dssp SCCEEEEEECSSSSCE-EEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET---------
T ss_pred CCcEEEEEECCCCCEE-EEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC---------
Confidence 4567899999999955 5555667788887432 111111 111 12357999999997777665
Q ss_pred hcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCc--------EEEEEECC-CCCcccceeEEEEeCCEEEEeeCC
Q 047259 133 QSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGK--------IIMDFNDP-NATYISFVTSAVEFEDNLYMASIQ 203 (225)
Q Consensus 133 ~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~--------~~~~~~~p-~g~~~~~~t~~~~~~~~Lyv~~~~ 203 (225)
.+.|...|.+++ .+..+... .|. ...+..++...+. +++...
T Consensus 150 ---------------------------DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh-~~~V~sVawSPdg-Laass~ 200 (588)
T 2j04_A 150 ---------------------------DGELQFFSIRKNSENTPEFYFESSIRLSDAGS-KDWVTHIVWYEDV-LVAALS 200 (588)
T ss_dssp ---------------------------TSEEEEEECCCCTTTCCCCEEEEEEECSCTTC-CCCEEEEEEETTE-EEEEET
T ss_pred ---------------------------CCEEEEEECCCCccccccceeeeeeecccccc-cccEEEEEEcCCc-EEEEeC
Confidence 456666665533 24555421 222 3456666665444 566677
Q ss_pred CCeEEEEeCCCcc
Q 047259 204 SKFVGKLPLNTPE 216 (225)
Q Consensus 204 ~~~i~~~~~~~~~ 216 (225)
.+.|...++++..
T Consensus 201 D~tVrlWd~~~~~ 213 (588)
T 2j04_A 201 NNSVFSMTVSASS 213 (588)
T ss_dssp TCCEEEECCCSSS
T ss_pred CCeEEEEECCCCc
Confidence 8888888887655
No 278
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.27 E-value=0.32 Score=43.92 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=28.4
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEEeCCEEEEeeC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEFEDNLYMASI 202 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~ 202 (225)
.+.+..+|.+ |+++-.+..+.+- ...+... ..+|++||+..
T Consensus 506 dg~l~A~D~~tG~~lW~~~~~~g~-~a~P~~y-~~~G~qYv~~~ 547 (582)
T 1flg_A 506 DGYFKAFDAKSGKELWKFQTGSGI-VSPPITW-EQDGEQYLGVT 547 (582)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEE
T ss_pred CCcEEEEECCCCCEEEEecCCCCc-ccCceEE-EECCEEEEEEE
Confidence 4678889974 9999999887653 3223222 36899999854
No 279
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.38 Score=45.67 Aligned_cols=98 Identities=13% Similarity=0.057 Sum_probs=64.6
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRC 82 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I 82 (225)
+.++++++|++.++-.. .|.|..|+..+.+.......-..-..++|+| |+ +.++-+..+.|
T Consensus 21 ~~lafspdg~~lAsgs~-----------------Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~-~L~S~s~D~~v 81 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATV-----------------TGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GI-YLVVINAKDTV 81 (902)
T ss_dssp EEEEEETTTTEEEEEET-----------------TSEEEEECSTTCEEEEECSSCCCEEEEEEET-TT-EEEEEETTCEE
T ss_pred EEEEECCCCCEEEEEeC-----------------CCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CC-EEEEEECcCeE
Confidence 45788888887776443 6788888876555444434334568999999 77 55566677899
Q ss_pred EEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 83 RRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
..++++.. .....+. .++....++++++|++.++...
T Consensus 82 ~lWd~~~~--~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~ 118 (902)
T 2oaj_A 82 YVLSLYSQ--KVLTTVF--VPGKITSIDTDASLDWMLIGLQ 118 (902)
T ss_dssp EEEETTTC--SEEEEEE--CSSCEEEEECCTTCSEEEEEET
T ss_pred EEEECCCC--cEEEEEc--CCCCEEEEEECCCCCEEEEEcC
Confidence 99998642 1122222 2334467888999987666544
No 280
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.18 E-value=0.21 Score=40.54 Aligned_cols=52 Identities=8% Similarity=0.068 Sum_probs=39.7
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEE--ecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVAL--SKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~--~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.|.|..||..+++...+.........++| +++++ ++++-..++.|..+++..
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSC
T ss_pred CCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCC
Confidence 67888889877776666555666789999 88887 555556678999999864
No 281
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.18 E-value=0.13 Score=43.55 Aligned_cols=68 Identities=7% Similarity=0.004 Sum_probs=42.1
Q ss_pred CcEEEcC-CCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC---Ce---EEEEecCccccceeEEecCCCEEEEE
Q 047259 3 NDVIEAS-DGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL---EE---TTVLHEGFYFANGVALSKDENFVVVC 75 (225)
Q Consensus 3 ndv~~~~-dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~---~~---~~~~~~~~~~pnGi~~~~dg~~Lyv~ 75 (225)
+.+++.+ +|++++|-+. .|.|..||..+ +. .............++++|+++.| ++
T Consensus 67 ~~~~~s~~~~~~l~s~s~-----------------dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s 128 (437)
T 3gre_A 67 TSSAVSPGETPYLITGSD-----------------QGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAF-AV 128 (437)
T ss_dssp EEEEEECSSSCEEEEEET-----------------TSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEE-EE
T ss_pred EEEEECCCCCCEEEEecC-----------------CceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEE-EE
Confidence 3566777 7766666443 56676666543 21 11222334557899999999855 55
Q ss_pred eCCCCEEEEEEec
Q 047259 76 ESWKFRCRRYWLK 88 (225)
Q Consensus 76 ~~~~~~I~~~~~~ 88 (225)
-+..+.|..++++
T Consensus 129 ~s~dg~i~vwd~~ 141 (437)
T 3gre_A 129 SSKDGQIIVLKVN 141 (437)
T ss_dssp EETTSEEEEEEEE
T ss_pred EeCCCEEEEEEec
Confidence 5566788888774
No 282
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.067 Score=49.62 Aligned_cols=102 Identities=13% Similarity=0.062 Sum_probs=59.9
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCe--EEEEec-CccccceeEEecC--CCEEEEEeC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEE--TTVLHE-GFYFANGVALSKD--ENFVVVCES 77 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~--~~~~~~-~~~~pnGi~~~~d--g~~Lyv~~~ 77 (225)
+.+++.++|+..+|-.. .|.|..||..++. ...... .......++|+++ ++ ++++-+
T Consensus 13 ~~l~~s~dg~~latg~~-----------------dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s 74 (753)
T 3jro_A 13 HDAVLDYYGKRLATCSS-----------------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCS 74 (753)
T ss_dssp EEECCCSSSCCEEEEET-----------------TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCS-EEEEEE
T ss_pred EEEEECCCCCeEEEEEC-----------------CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCC-EEEEEe
Confidence 35667777775555433 5666666654233 222233 3345578999988 77 455556
Q ss_pred CCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC--CCEEEEeec
Q 047259 78 WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD--GSFWVALIK 123 (225)
Q Consensus 78 ~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~--G~l~v~~~~ 123 (225)
.++.|..+++.+........+. ........+++.++ |+++++...
T Consensus 75 ~Dg~I~vwd~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~~l~sgs~ 121 (753)
T 3jro_A 75 YDGKVLIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPLLLVASS 121 (753)
T ss_dssp TTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CCCeEEEEECCCCccccccccc-CCCCCeEEEEECCCCCCCEEEEEeC
Confidence 6789999998753111122221 12234567888888 887776655
No 283
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.12 E-value=0.055 Score=49.39 Aligned_cols=140 Identities=9% Similarity=0.041 Sum_probs=74.7
Q ss_pred CCcEEEEEeCCCCeEE---EEe------cCccccceeEEecCCCEEEEEe-CC--CCEEEEEE----ecCCCCCceeEEe
Q 047259 36 PHGQLLKYDPELEETT---VLH------EGFYFANGVALSKDENFVVVCE-SW--KFRCRRYW----LKGPRQGRLESFI 99 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~---~~~------~~~~~pnGi~~~~dg~~Lyv~~-~~--~~~I~~~~----~~~~~~~~~~~~~ 99 (225)
....|+.+|.++++.. .+. ........++|+||++.+|... .. ..+|+.++ ++++ ....+.
T Consensus 222 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g---~~~~~~ 298 (719)
T 1z68_A 222 PVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW---DCPKTQ 298 (719)
T ss_dssp CEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE---ECCGGG
T ss_pred CeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC---ceEEEE
Confidence 3447888998765531 221 1233457899999976444422 22 24688888 5432 221111
Q ss_pred ----ccCCCCCC-----ceEECCCCC-EEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC
Q 047259 100 ----EHLPGGPD-----NINLAPDGS-FWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH 169 (225)
Q Consensus 100 ----~~~~g~Pd-----~i~~d~~G~-l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~ 169 (225)
....+.-+ .+++.+||+ |++...... ....|..++.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---------------------------------g~~~l~~~~~~ 345 (719)
T 1z68_A 299 EHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD---------------------------------GYKHIHYIKDT 345 (719)
T ss_dssp EEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT---------------------------------SCEEEEEESSC
T ss_pred ecccccCCceEccccCCccEECCCCCeEEEEEEccC---------------------------------CceEEEEEECC
Confidence 11222222 788999997 444322210 14578888887
Q ss_pred CcEEEEEECCCCCcccceeEEEEeCCEEEEeeCC------CCeEEEEeCCC
Q 047259 170 GKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQ------SKFVGKLPLNT 214 (225)
Q Consensus 170 G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~------~~~i~~~~~~~ 214 (225)
+.....+...... +..+.. . ++++||++... ..+++++++++
T Consensus 346 ~~~~~~lt~~~~~-v~~~~~-~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~ 393 (719)
T 1z68_A 346 VENAIQITSGKWE-AINIFR-V-TQDSLFYSSNEFEEYPGRRNIYRISIGS 393 (719)
T ss_dssp STTCEECSCSSSC-EEEEEE-E-CSSEEEEEESCGGGCTTCBEEEEEECSS
T ss_pred CCceEecccCceE-EEEEEE-E-eCCEEEEEEecCCCCCceEEEEEEeCCC
Confidence 5434444432222 211211 2 67788888754 35677777743
No 284
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.07 E-value=0.15 Score=40.78 Aligned_cols=102 Identities=13% Similarity=0.119 Sum_probs=60.4
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCC--e--EE-EEecCccccceeEEec--CCCEEEEE
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELE--E--TT-VLHEGFYFANGVALSK--DENFVVVC 75 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--~--~~-~~~~~~~~pnGi~~~~--dg~~Lyv~ 75 (225)
+.+++.++|++.++-.. .|.|..||..++ . .. .+.........++|+| |++ ++++
T Consensus 15 ~~~~~~~~~~~l~~~~~-----------------dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s 76 (351)
T 3f3f_A 15 HDVVYDFYGRHVATCSS-----------------DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-IIAS 76 (351)
T ss_dssp EEEEECSSSSEEEEEET-----------------TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-EEEE
T ss_pred eEEEEcCCCCEEEEeeC-----------------CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-EEEE
Confidence 46788888887776543 566666665433 2 22 2223445678999999 577 4555
Q ss_pred eCCCCEEEEEEecCCCC-------CceeEEeccCCCCCCceEECCC--CCEEEEeec
Q 047259 76 ESWKFRCRRYWLKGPRQ-------GRLESFIEHLPGGPDNINLAPD--GSFWVALIK 123 (225)
Q Consensus 76 ~~~~~~I~~~~~~~~~~-------~~~~~~~~~~~g~Pd~i~~d~~--G~l~v~~~~ 123 (225)
-..++.|..++++.... .....+. ...+....+++.++ |++.++...
T Consensus 77 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 77 ASYDKTVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp EETTSCEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEET
T ss_pred EcCCCeEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCcEEEEecC
Confidence 55678898898864211 0111111 12334567888888 776665544
No 285
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.02 E-value=0.36 Score=44.44 Aligned_cols=55 Identities=9% Similarity=0.163 Sum_probs=38.3
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEEeCCEEEEeeCC---------------------CCeEEEEeCCCcc
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQ---------------------SKFVGKLPLNTPE 216 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~---------------------~~~i~~~~~~~~~ 216 (225)
.+.+..+|.+ |+++..+..+.+. ...+... ..+|+.||+... ...+.+|.+++..
T Consensus 495 dg~l~a~D~~tG~~lw~~~~~~~~-~~~p~ty-~~~G~qyv~~~~G~gg~~~~~~~~~~~~~~~~~g~~~~~f~l~~~~ 571 (689)
T 1yiq_A 495 DGRVIAYAADTGEKLWEQPAASGV-MAAPVTY-SVDGEQYVTFMAGWGGAFSTFAGALSLRAGVQPYAQVLTYKLGGTA 571 (689)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEEECCCTTHHHHTHHHHGGGCCCCCCEEEEEEETCCC
T ss_pred CCcEEEEECCCCccceeeeCCCCc-ccCceEE-EECCEEEEEEEecCCccccccccccccccccCCCceEEEeecCCcc
Confidence 5688899975 9999999887653 3233222 468999988542 3488888887644
No 286
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.98 E-value=0.63 Score=39.55 Aligned_cols=82 Identities=10% Similarity=0.025 Sum_probs=50.3
Q ss_pred CCcEEEEEeCCCCeEEEEec-CccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 36 PHGQLLKYDPELEETTVLHE-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
..|.|..+|..+++...... .......++++|+++.|+ +-+..+.|..+++... .....+. ........++++
T Consensus 288 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-sg~~dg~i~vwd~~~~--~~~~~~~-~h~~~v~~~~~~-- 361 (464)
T 3v7d_B 288 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI-SASMDTTIRIWDLENG--ELMYTLQ-GHTALVGLLRLS-- 361 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTT--EEEEEEC-CCSSCEEEEEEC--
T ss_pred CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCC--cEEEEEe-CCCCcEEEEEEc--
Confidence 46788889987666554443 345568899999998554 5556788999998642 1122222 122334556666
Q ss_pred CCEEEEeec
Q 047259 115 GSFWVALIK 123 (225)
Q Consensus 115 G~l~v~~~~ 123 (225)
+...++...
T Consensus 362 ~~~l~s~s~ 370 (464)
T 3v7d_B 362 DKFLVSAAA 370 (464)
T ss_dssp SSEEEEEET
T ss_pred CCEEEEEeC
Confidence 455555544
No 287
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.94 E-value=0.48 Score=43.46 Aligned_cols=53 Identities=11% Similarity=0.229 Sum_probs=36.9
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEEeCCEEEEeeCC---------------------CCeEEEEeCCC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQ---------------------SKFVGKLPLNT 214 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~---------------------~~~i~~~~~~~ 214 (225)
.+.+..+|.+ |+++..+..+.+- ...+... ..+|++|++... .+.|.++.+.+
T Consensus 478 dg~l~a~d~~tG~~l~~~~~~~~~-~~~p~~~-~~~G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g 552 (668)
T 1kv9_A 478 AGQMHAYSADKGEALWQFEAQSGI-VAAPMTF-ELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDG 552 (668)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETC
T ss_pred cccchhhhhhcChhheEecCCCCc-ccCceEE-EECCEEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCc
Confidence 4688888875 9999888876542 3233222 468999988654 35888888776
No 288
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.86 E-value=0.52 Score=37.55 Aligned_cols=141 Identities=11% Similarity=0.004 Sum_probs=76.7
Q ss_pred CcEEEEEeCCCCe----------EEEEecCccccceeEEecC--CCEEEEEeCCCCEEEEEEecCCC-CCceeEEe--cc
Q 047259 37 HGQLLKYDPELEE----------TTVLHEGFYFANGVALSKD--ENFVVVCESWKFRCRRYWLKGPR-QGRLESFI--EH 101 (225)
Q Consensus 37 ~g~v~~~d~~~~~----------~~~~~~~~~~pnGi~~~~d--g~~Lyv~~~~~~~I~~~~~~~~~-~~~~~~~~--~~ 101 (225)
.|.|..||..+++ +..+.........++++|+ ++.| ++-...+.|..+++.... ......-. ..
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL-ACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE-EEecCCCcEEEecCCChHHhccccccccccc
Confidence 5666666655431 2222333456789999999 8744 555567899999986431 11111100 00
Q ss_pred -------CCCCCCceEECCC---CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCc
Q 047259 102 -------LPGGPDNINLAPD---GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGK 171 (225)
Q Consensus 102 -------~~g~Pd~i~~d~~---G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~ 171 (225)
.......+++.++ +.++++.... ...++.....++
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~-----------------------------------~~~~~~~~~~~~ 203 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE-----------------------------------QAIIYQRGKDGK 203 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT-----------------------------------EEEEEEECTTSC
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCC-----------------------------------CcEEEEccCCCc
Confidence 1122456777775 6666655441 233344444566
Q ss_pred EEEEEECCCCCcccceeEEEEe-CC----EEEEeeCCCCeEEEEeCCCc
Q 047259 172 IIMDFNDPNATYISFVTSAVEF-ED----NLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 172 ~~~~~~~p~g~~~~~~t~~~~~-~~----~Lyv~~~~~~~i~~~~~~~~ 215 (225)
........ +. -..++.+... ++ .++++....+.|..+++...
T Consensus 204 ~~~~~~~~-~h-~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 204 LHVAAKLP-GH-KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEEECC-CC-CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred eeeeeecC-CC-CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 53333332 11 1235555553 33 67777777788888887653
No 289
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.82 E-value=0.72 Score=38.96 Aligned_cols=52 Identities=10% Similarity=0.102 Sum_probs=38.8
Q ss_pred CcEEEEEeCCCCeEEEEecC---ccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLHEG---FYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~---~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.+.|+.||..+|++..+... ...-..|+|+|||++| ++-+.++.|..+++..
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~l-asgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEE-EEEETTSCEEEEETTT
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEE-EEEECCCeEEEEEcCC
Confidence 56899999988887665432 2345899999999955 4555678899998864
No 290
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.78 E-value=0.58 Score=37.56 Aligned_cols=62 Identities=18% Similarity=0.149 Sum_probs=35.2
Q ss_pred ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEee
Q 047259 57 FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALI 122 (225)
Q Consensus 57 ~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~ 122 (225)
......++|+||++.| ++-...+.|..++.... ...............+.+.+++++.++..
T Consensus 86 ~~~V~~~~~s~dg~~l-~s~~~d~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~s~s 147 (340)
T 4aow_A 86 SHFVSDVVISSDGQFA-LSGSWDGTLRLWDLTTG---TTTRRFVGHTKDVLSVAFSSDNRQIVSGS 147 (340)
T ss_dssp SSCEEEEEECTTSSEE-EEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred CCCEEEEEECCCCCEE-EEEcccccceEEeeccc---ceeeeecCCCCceeEEEEeecCccceeec
Confidence 4456889999999855 45556678888876532 11111111222334556666666555443
No 291
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.75 E-value=0.14 Score=46.41 Aligned_cols=76 Identities=11% Similarity=-0.052 Sum_probs=44.9
Q ss_pred CcEEEEEeCCCCeEEEEecCcc-----ccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCc-----eeEEeccCC---
Q 047259 37 HGQLLKYDPELEETTVLHEGFY-----FANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGR-----LESFIEHLP--- 103 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~-----~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~-----~~~~~~~~~--- 103 (225)
+|.|..+|.+ +.+.. .+... .-..++|+|||+.|+++. ..+.|..+++.++...+ ...+-.+..
T Consensus 106 dg~V~iwd~~-~~l~~-l~~~~~~~~~sv~svafSPDG~~LAsgs-~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~ 182 (588)
T 2j04_A 106 NGNVSVFKDN-KMLTN-LDSKGNLSSRTYHCFEWNPIESSIVVGN-EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSK 182 (588)
T ss_dssp TSCEEEEETT-EEEEE-CCCSSCSTTTCEEEEEECSSSSCEEEEE-TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCC
T ss_pred CCcEEEEeCC-ceeee-ccCCCccccccEEEEEEcCCCCEEEEEc-CCCEEEEEECCCCccccccceeeeeeeccccccc
Confidence 5667777753 32222 22211 256799999999776665 46899999987643211 123311111
Q ss_pred CCCCceEECCCC
Q 047259 104 GGPDNINLAPDG 115 (225)
Q Consensus 104 g~Pd~i~~d~~G 115 (225)
..-..+++.++|
T Consensus 183 ~~V~sVawSPdg 194 (588)
T 2j04_A 183 DWVTHIVWYEDV 194 (588)
T ss_dssp CCEEEEEEETTE
T ss_pred ccEEEEEEcCCc
Confidence 234678888998
No 292
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.71 E-value=0.62 Score=37.37 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=59.0
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC--CeE-EEEecCccccceeEEecC--CCEEEEEeC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL--EET-TVLHEGFYFANGVALSKD--ENFVVVCES 77 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~--~~~-~~~~~~~~~pnGi~~~~d--g~~Lyv~~~ 77 (225)
+++++.++|+..+|-+. .+.|..+|..+ .+. ..+...-..-+.++|+++ ++ ++++-+
T Consensus 13 ~~~~~s~~g~~las~s~-----------------D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~-~l~s~s 74 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSS-----------------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCS 74 (297)
T ss_dssp EEEEECTTSSEEEEEET-----------------TSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEE
T ss_pred EEEEECCCCCEEEEEeC-----------------CCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCC-EEEEEc
Confidence 46788899988777554 45555555432 222 233233344578999864 66 666777
Q ss_pred CCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC--CCEEEEeec
Q 047259 78 WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD--GSFWVALIK 123 (225)
Q Consensus 78 ~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~--G~l~v~~~~ 123 (225)
.++.|..+++..+.......+. ........+++.++ |.+.++...
T Consensus 75 ~D~~v~iWd~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~g~~l~s~s~ 121 (297)
T 2pm7_B 75 YDGKVMIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPMLLVASS 121 (297)
T ss_dssp TTTEEEEEEBSSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CCCEEEEEEcCCCceEEEEEee-cCCCceeEEEeCcCCCCcEEEEEEC
Confidence 7889999988643111222222 11223456778776 666665544
No 293
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.65 Score=44.07 Aligned_cols=85 Identities=5% Similarity=-0.103 Sum_probs=50.4
Q ss_pred CCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeE-------E-eccCCCCCC
Q 047259 36 PHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLES-------F-IEHLPGGPD 107 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~-------~-~~~~~g~Pd 107 (225)
..+.|..||..+++.............++++|+++.|+++. .++.|..+++++.......+ . .....+...
T Consensus 77 ~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~ 155 (902)
T 2oaj_A 77 AKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGL-QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIV 155 (902)
T ss_dssp TTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEE-TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCC
T ss_pred CcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEc-CCCcEEEEECCCCccccceeccccccccccccCCCCeE
Confidence 46778888876665443333334567899999999776665 56789999987532110100 0 001123456
Q ss_pred ceEECCCC-CEEEEe
Q 047259 108 NINLAPDG-SFWVAL 121 (225)
Q Consensus 108 ~i~~d~~G-~l~v~~ 121 (225)
.+++.+++ .+.++.
T Consensus 156 sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 156 SIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred EEEEccCCCCEEEEE
Confidence 78888864 444443
No 294
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.16 E-value=1.3 Score=37.43 Aligned_cols=115 Identities=9% Similarity=-0.066 Sum_probs=68.7
Q ss_pred cccceeEEecCCCEEEEEe--CCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEeecCCchhhhhhhcC
Q 047259 58 YFANGVALSKDENFVVVCE--SWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVALIKMNQTGVRAIQSC 135 (225)
Q Consensus 58 ~~pnGi~~~~dg~~Lyv~~--~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~ 135 (225)
.....++++|++..++++. +..+.|..+++..+ ....... .......+.+.++++..++..+..
T Consensus 277 ~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~---~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~---------- 342 (420)
T 4gga_A 277 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG---ACLSAVD-AHSQVCSILWSPHYKELISGHGFA---------- 342 (420)
T ss_dssp SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT---EEEEEEE-CSSCEEEEEEETTTTEEEEEECTT----------
T ss_pred CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc---ccceeec-cccceeeeeecCCCCeEEEEEecC----------
Confidence 3457889999877565543 35678888887642 2211111 233456778888888777665521
Q ss_pred hhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEEe-CCEEEEeeCCCCeEEEEeCC
Q 047259 136 PDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVEF-EDNLYMASIQSKFVGKLPLN 213 (225)
Q Consensus 136 ~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~~-~~~Lyv~~~~~~~i~~~~~~ 213 (225)
.+.|...|. .++.+..+....+ .++.++.. ++.+.++......|..-++.
T Consensus 343 ------------------------d~~I~iwd~~~~~~v~~l~gH~~----~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 343 ------------------------QNQLVIWKYPTMAKVAELKGHTS----RVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp ------------------------TCCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ------------------------CCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 345555554 4777777764333 35556553 56665666666667666654
Q ss_pred C
Q 047259 214 T 214 (225)
Q Consensus 214 ~ 214 (225)
.
T Consensus 395 ~ 395 (420)
T 4gga_A 395 E 395 (420)
T ss_dssp C
T ss_pred C
Confidence 3
No 295
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.08 E-value=1 Score=36.04 Aligned_cols=53 Identities=13% Similarity=0.032 Sum_probs=34.1
Q ss_pred CCcEEEEEeCCCCeEE---EEecCccccceeEEecC--CCEEEEEeCCCCEEEEEEecC
Q 047259 36 PHGQLLKYDPELEETT---VLHEGFYFANGVALSKD--ENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~---~~~~~~~~pnGi~~~~d--g~~Lyv~~~~~~~I~~~~~~~ 89 (225)
..|.|..+|..+++.+ .+.......+.++|+|+ ++ ++++-+..+.|..+++..
T Consensus 75 ~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 75 YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCS
T ss_pred CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecC
Confidence 3566777776554321 22223345688999997 66 555666778999998864
No 296
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.04 E-value=1 Score=35.70 Aligned_cols=52 Identities=10% Similarity=0.114 Sum_probs=38.3
Q ss_pred CcEEEEEeCCCCeEEEEec---CccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLHE---GFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~---~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.+.|..+|..+++...... ....-..++++|+++.| ++-+..+.|..++++.
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l-~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEE-EEEETTSEEEEEETTT
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEE-EEEECCCcEEEeecCC
Confidence 5678899988888765543 22345789999999844 5666778998888864
No 297
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.80 E-value=0.034 Score=47.12 Aligned_cols=51 Identities=10% Similarity=-0.107 Sum_probs=27.6
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.|.|+.+|..+|+..-.... .......+..+++ +|++.+..+.|+.++.++
T Consensus 18 dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 18 DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp TSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC----
T ss_pred CCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECCC
Confidence 47899999887875433222 2222333445555 777777788999999853
No 298
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.78 E-value=0.28 Score=42.34 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=41.2
Q ss_pred ccceeEEecCCCEEEE---EeCCCCEEEEEEecCC---CCCc---eeEEe--ccCCCCCCceEECCC-CCEEEEeec
Q 047259 59 FANGVALSKDENFVVV---CESWKFRCRRYWLKGP---RQGR---LESFI--EHLPGGPDNINLAPD-GSFWVALIK 123 (225)
Q Consensus 59 ~pnGi~~~~dg~~Lyv---~~~~~~~I~~~~~~~~---~~~~---~~~~~--~~~~g~Pd~i~~d~~-G~l~v~~~~ 123 (225)
..+.++|+|||+.|+| +.+..+.|..+++... .... ...+. .........+++.++ ++++++...
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 4789999999998887 5667788989987531 0001 00111 011234568889887 677776655
No 299
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.72 E-value=1 Score=41.71 Aligned_cols=52 Identities=10% Similarity=-0.024 Sum_probs=34.0
Q ss_pred cEEEEEeCCCCe--EEEEe--cCccccceeEEecCCCEEEEEeC--CCCEEEEEEecC
Q 047259 38 GQLLKYDPELEE--TTVLH--EGFYFANGVALSKDENFVVVCES--WKFRCRRYWLKG 89 (225)
Q Consensus 38 g~v~~~d~~~~~--~~~~~--~~~~~pnGi~~~~dg~~Lyv~~~--~~~~I~~~~~~~ 89 (225)
..||+++..++. -.++. ....+-.++.+||||++|+++.. ....|+.+++++
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 468888876543 12332 22234467899999998877653 356888888865
No 300
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.53 E-value=0.43 Score=37.98 Aligned_cols=96 Identities=11% Similarity=0.046 Sum_probs=53.3
Q ss_pred cEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCC-Ce------EEEEec-CccccceeEEecCCCEEEEE
Q 047259 4 DVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPEL-EE------TTVLHE-GFYFANGVALSKDENFVVVC 75 (225)
Q Consensus 4 dv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-~~------~~~~~~-~~~~pnGi~~~~dg~~Lyv~ 75 (225)
.+.++++|.||.. + .|.||++++.+ +. -+++.+ +...-.-|.++|+|. ||..
T Consensus 92 a~~fD~~G~LYav--~-----------------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav 151 (236)
T 1tl2_A 92 FLFFDPNGYLYAV--S-----------------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAV 151 (236)
T ss_dssp EEEECTTSCEEEE--E-----------------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEE
T ss_pred EEEECCCCCEEEe--C-----------------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEE
Confidence 4566777777776 2 47888888632 11 122222 333447899999997 9988
Q ss_pred eCCCCEEEEEEec-CC--C-CCceeEEeccCCCCCCceEECCCCCEEEEe
Q 047259 76 ESWKFRCRRYWLK-GP--R-QGRLESFIEHLPGGPDNINLAPDGSFWVAL 121 (225)
Q Consensus 76 ~~~~~~I~~~~~~-~~--~-~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~ 121 (225)
. .++++|-..- +. . +.....+....-..=.-+.++++|.||.+.
T Consensus 152 ~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 152 H--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp E--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred e--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 8 5667764332 11 0 111122221100011236688889988887
No 301
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.44 E-value=0.35 Score=39.36 Aligned_cols=101 Identities=14% Similarity=0.024 Sum_probs=58.4
Q ss_pred CcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEE---EEecCccccceeEEec--CCCEEEEEeC
Q 047259 3 NDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETT---VLHEGFYFANGVALSK--DENFVVVCES 77 (225)
Q Consensus 3 ndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~---~~~~~~~~pnGi~~~~--dg~~Lyv~~~ 77 (225)
+++++.++|+..+|-+. .+.|..+|..+++.. .+......-..++|++ +++ ++++-+
T Consensus 17 ~~v~~s~~g~~lasgs~-----------------D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~-~l~s~s 78 (316)
T 3bg1_A 17 HDAQMDYYGTRLATCSS-----------------DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGN-ILASCS 78 (316)
T ss_dssp EEEEECGGGCEEEEEET-----------------TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSS-CEEEEE
T ss_pred EEeeEcCCCCEEEEEeC-----------------CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCC-EEEEEE
Confidence 46788888887777554 566666665444422 2223334567899986 366 556666
Q ss_pred CCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC--CCEEEEee
Q 047259 78 WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD--GSFWVALI 122 (225)
Q Consensus 78 ~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~--G~l~v~~~ 122 (225)
..+.|..+++..........+. ...+....+++.++ |.+.++..
T Consensus 79 ~D~~v~iWd~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~g~~lasgs 124 (316)
T 3bg1_A 79 YDRKVIIWREENGTWEKSHEHA-GHDSSVNSVCWAPHDYGLILACGS 124 (316)
T ss_dssp TTSCEEEECCSSSCCCEEEEEC-CCSSCCCEEEECCTTTCSCEEEEC
T ss_pred CCCEEEEEECCCCcceEEEEcc-CCCCceEEEEECCCCCCcEEEEEc
Confidence 7788888887642111122222 12234567777776 55554443
No 302
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.41 E-value=2.7 Score=37.70 Aligned_cols=51 Identities=14% Similarity=0.029 Sum_probs=33.5
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.+.|..+|+. |+++-.+..+... . .+.++..++.+|+++ ..+.|..++..+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~-~--~~~~~t~gg~v~~g~-~dg~l~a~D~~t 494 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAA-W--GGTLYTKGGLVWYAT-LDGYLKALDNKD 494 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCC-C--SBCEEETTTEEEEEC-TTSEEEEEETTT
T ss_pred CCeEEEEECCCCCEEEEecCCCCc-c--ceeEEECCCEEEEEc-CCCeEEEEECCC
Confidence 5899999975 8988777653211 1 122334578888865 457888887654
No 303
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.98 E-value=2.5 Score=35.70 Aligned_cols=52 Identities=8% Similarity=-0.066 Sum_probs=33.4
Q ss_pred CCCcEEEEEeCCCCeEEEEec-CccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 35 KPHGQLLKYDPELEETTVLHE-GFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~-~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
...|.|..+|..+++...... .......+++++ + .+++-+..+.|..+++..
T Consensus 190 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 190 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMAS 242 (435)
T ss_dssp ETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--T-EEEEEETTSCEEEEECSS
T ss_pred cCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCC
Confidence 346778888876666544433 233456777764 4 555666778999999864
No 304
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.73 E-value=1.1 Score=39.75 Aligned_cols=88 Identities=15% Similarity=0.018 Sum_probs=54.0
Q ss_pred CCCCcEEEEEeCCCCeE--EEEecCcccccee--EEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCC-CCCc
Q 047259 34 GKPHGQLLKYDPELEET--TVLHEGFYFANGV--ALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPG-GPDN 108 (225)
Q Consensus 34 ~~~~g~v~~~d~~~~~~--~~~~~~~~~pnGi--~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g-~Pd~ 108 (225)
+...|.|..+|..++.. ..+......-+.| ++++++..++++-+..+.|..+++... .....+.....+ ....
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~--~~~~~~~~~~~~~~v~~ 360 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI--ATTKTTVSRFRGSNLVP 360 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH--HHHCEEEEECSCCSCCC
T ss_pred EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC--CcccccccccccCcccc
Confidence 34478888888764421 2222333445777 568887347788888999999998642 111223222221 2357
Q ss_pred eEECCCCCEEEEeec
Q 047259 109 INLAPDGSFWVALIK 123 (225)
Q Consensus 109 i~~d~~G~l~v~~~~ 123 (225)
+++.++|..+++...
T Consensus 361 v~fsp~~~~l~s~~~ 375 (524)
T 2j04_B 361 VVYCPQIYSYIYSDG 375 (524)
T ss_dssp EEEETTTTEEEEECS
T ss_pred eEeCCCcCeEEEeCC
Confidence 899999988777654
No 305
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.71 E-value=1.2 Score=36.15 Aligned_cols=66 Identities=6% Similarity=-0.102 Sum_probs=41.8
Q ss_pred ccccceeEEecCC---CEEEEEeCCCCEEEEEEecCCCCC--ceeEEeccCCCCCCceEECCCCCEEEEeec
Q 047259 57 FYFANGVALSKDE---NFVVVCESWKFRCRRYWLKGPRQG--RLESFIEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 57 ~~~pnGi~~~~dg---~~Lyv~~~~~~~I~~~~~~~~~~~--~~~~~~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
....+.++|+|++ ..++++-+..+.|..++++....+ ....+. ...+....+++.++|++.++...
T Consensus 212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH-KFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE-ECSSCEEEEEECTTTCCEEEEES
T ss_pred CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh-cCCCcEEEEEEcCCCCEEEEEcC
Confidence 3456899999986 236677778889998987642111 112222 12333467899999987776655
No 306
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.63 E-value=4.2 Score=37.20 Aligned_cols=52 Identities=8% Similarity=-0.027 Sum_probs=34.1
Q ss_pred ceEEEEECCC-CcEEEEEECCCCCcccceeEEEEeCCEEEEeeCCCCeEEEEeCCCc
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNATYISFVTSAVEFEDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
.+.|..+|+. |+++-.+..+.. .. ...+...++.+|++ ...+.+..+++.+.
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~~--~~-~g~~~~~g~~v~~g-~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVSP--WN-GGTLTTAGNVVFQG-TADGRLVAYHAATG 508 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS--CC-CCEEEETTTEEEEE-CTTSEEEEEETTTC
T ss_pred ccEEEEEeCCCCcEEeecCCCCC--Cc-CcceEeCCCEEEEE-CCCCcEEEEECCCC
Confidence 5889999985 888877765321 11 12234457788887 46788888887643
No 307
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.41 E-value=3.1 Score=35.05 Aligned_cols=134 Identities=17% Similarity=0.123 Sum_probs=72.4
Q ss_pred CCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCC
Q 047259 36 PHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPD 114 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~ 114 (225)
..|.|..+|..+++......+ ......+++ +++.+ ++....+.|..+++... .....+. ........+.+ +
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l-~~~~~d~~i~i~d~~~~--~~~~~~~-~~~~~v~~~~~--~ 328 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHV-VSGSLDTSIRVWDVETG--NCIHTLT-GHQSLTSGMEL--K 328 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEE-EEEETTSCEEEEETTTC--CEEEEEC-CCCSCEEEEEE--E
T ss_pred CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEE-EEEeCCCeEEEEECCCC--CEEEEEc-CCcccEEEEEE--e
Confidence 466777777665554433332 233456666 66655 44455678888887642 1122221 11222234444 4
Q ss_pred CCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCcccceeEEEEe
Q 047259 115 GSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVTSAVEF 193 (225)
Q Consensus 115 G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t~~~~~ 193 (225)
|+++++... .+.|..+|. .|+.+..+..+.+. -..++.+..+
T Consensus 329 ~~~l~~~~~------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~ 371 (445)
T 2ovr_B 329 DNILVSGNA------------------------------------DSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFN 371 (445)
T ss_dssp TTEEEEEET------------------------------------TSCEEEEETTTCCEEEEECSTTSC-SSCEEEEEEC
T ss_pred CCEEEEEeC------------------------------------CCeEEEEECCCCcEEEEEccCCCC-CCCEEEEEEC
Confidence 555555544 345666665 47777777754322 2345555554
Q ss_pred CCEEEEeeCCCCeEEEEeCCCc
Q 047259 194 EDNLYMASIQSKFVGKLPLNTP 215 (225)
Q Consensus 194 ~~~Lyv~~~~~~~i~~~~~~~~ 215 (225)
+. ++++....+.|..+++...
T Consensus 372 ~~-~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 372 KN-FVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp SS-EEEEEETTSEEEEEETTTC
T ss_pred CC-EEEEEeCCCeEEEEECCCC
Confidence 44 4445556678888887654
No 308
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.39 E-value=1 Score=40.87 Aligned_cols=136 Identities=10% Similarity=-0.060 Sum_probs=74.8
Q ss_pred EEeCCCCeEEEEecCccccceeEEec-CCCEEEEEeC-----------CCCEEEEEEecCCCCCceeEEeccCCCCCCce
Q 047259 42 KYDPELEETTVLHEGFYFANGVALSK-DENFVVVCES-----------WKFRCRRYWLKGPRQGRLESFIEHLPGGPDNI 109 (225)
Q Consensus 42 ~~d~~~~~~~~~~~~~~~pnGi~~~~-dg~~Lyv~~~-----------~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i 109 (225)
.+|+.+++++.+..--..+...++.+ +++ |||.-. ....+++|++..+...............--+.
T Consensus 170 ~~dp~~~~W~~~~~~P~~~~~~av~~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~ 248 (656)
T 1k3i_A 170 APQPGLGRWGPTIDLPIVPAAAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGI 248 (656)
T ss_dssp CCCTTSCEEEEEEECSSCCSEEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEE
T ss_pred cCCCCCCeeeeeccCCCCceeEEEEecCCE-EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccc
Confidence 34555677776654334567888888 665 777631 12368889887542222221110011122346
Q ss_pred EECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCccccee
Q 047259 110 NLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISFVT 188 (225)
Q Consensus 110 ~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~~t 188 (225)
++..+|+||+..... ...+.++|+. ++....-..|..+ ...+
T Consensus 249 ~~~~~g~lyv~GG~~-----------------------------------~~~v~~yd~~t~~W~~~~~~~~~R--~~~s 291 (656)
T 1k3i_A 249 SMDGNGQIVVTGGND-----------------------------------AKKTSLYDSSSDSWIPGPDMQVAR--GYQS 291 (656)
T ss_dssp EECTTSCEEEECSSS-----------------------------------TTCEEEEEGGGTEEEECCCCSSCC--SSCE
T ss_pred cCCCCCCEEEeCCCC-----------------------------------CCceEEecCcCCceeECCCCCccc--cccc
Confidence 777889999987641 2257888886 4554332233332 1233
Q ss_pred EEEEeCCEEEEeeC-C-----CCeEEEEeCCCc
Q 047259 189 SAVEFEDNLYMASI-Q-----SKFVGKLPLNTP 215 (225)
Q Consensus 189 ~~~~~~~~Lyv~~~-~-----~~~i~~~~~~~~ 215 (225)
.++..+++||+..= . .+.+.+|+..+.
T Consensus 292 ~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 292 SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred eEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 33333778887643 1 256778877654
No 309
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.37 E-value=0.34 Score=43.81 Aligned_cols=87 Identities=14% Similarity=0.088 Sum_probs=60.4
Q ss_pred EEEEEeCCC-----CeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecC------CCC-Ccee-EEecc-CCC
Q 047259 39 QLLKYDPEL-----EETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG------PRQ-GRLE-SFIEH-LPG 104 (225)
Q Consensus 39 ~v~~~d~~~-----~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~------~~~-~~~~-~~~~~-~~g 104 (225)
.|-.+|... ..+...+.....|.|+..+|||++++++.-....+..|+.+. ..+ .... +..+- +.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 355677643 134444555678999999999999999999999999999762 111 1111 12221 223
Q ss_pred CCCceEECCCCCEEEEeecCC
Q 047259 105 GPDNINLAPDGSFWVALIKMN 125 (225)
Q Consensus 105 ~Pd~i~~d~~G~l~v~~~~~~ 125 (225)
.|-..++|++|+.|++.+-.+
T Consensus 379 GPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTT
T ss_pred cccEEEECCCCceEeeeeecc
Confidence 589999999999999998644
No 310
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.96 E-value=2.7 Score=33.09 Aligned_cols=136 Identities=8% Similarity=-0.068 Sum_probs=73.4
Q ss_pred CcEEEEEeCCCCeE-----EEEecCccccceeEEecCCCEEEE--EeCCCCEEEEEEecCCCCCceeEEeccCCCCCCce
Q 047259 37 HGQLLKYDPELEET-----TVLHEGFYFANGVALSKDENFVVV--CESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNI 109 (225)
Q Consensus 37 ~g~v~~~d~~~~~~-----~~~~~~~~~pnGi~~~~dg~~Lyv--~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i 109 (225)
.|.|..+|..+++. ............+++.+++..++. +....+.|..++.... ...... ........+
T Consensus 171 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~---~~~~~~-~~~~~v~~~ 246 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG---ACLSAV-DAHSQVCSI 246 (318)
T ss_dssp TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC---CEEEEE-ECSSCEEEE
T ss_pred CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc---cccccc-cceeeeeee
Confidence 55666666654321 111122233467888887764543 3334456666666432 121111 122234567
Q ss_pred EECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCCCCccccee
Q 047259 110 NLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPNATYISFVT 188 (225)
Q Consensus 110 ~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~g~~~~~~t 188 (225)
.+.+++...++..+.. .+.|...|. .|+.+..+....+ .++
T Consensus 247 ~~~~~~~~~~~~sg~~----------------------------------d~~i~iwd~~~~~~~~~l~gH~~----~V~ 288 (318)
T 4ggc_A 247 LWSPHYKELISGHGFA----------------------------------QNQLVIWKYPTMAKVAELKGHTS----RVL 288 (318)
T ss_dssp EEETTTTEEEEEECTT----------------------------------TCCEEEEETTTCCEEEEECCCSS----CEE
T ss_pred eecccccceEEEEEcC----------------------------------CCEEEEEECCCCcEEEEEcCCCC----CEE
Confidence 7778777666554411 345666664 4788877764433 356
Q ss_pred EEEEe-CCEEEEeeCCCCeEEEEeCCC
Q 047259 189 SAVEF-EDNLYMASIQSKFVGKLPLNT 214 (225)
Q Consensus 189 ~~~~~-~~~Lyv~~~~~~~i~~~~~~~ 214 (225)
.++.. ++.+.++....+.|..-++..
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 66653 566666666667777766643
No 311
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.56 E-value=0.78 Score=40.78 Aligned_cols=52 Identities=10% Similarity=-0.134 Sum_probs=35.5
Q ss_pred CcEEEEEeCCCCeE-EEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEET-TVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~-~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.+.|..+|..++.. ..+.......+.|+++|+|+ ++++-+..+.|..+++..
T Consensus 376 d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 376 ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP-MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC-BCEEEETTTEEECCBSCS
T ss_pred CCcEEEEECcccccceeeecCCCceEEEEeCCCCC-eEEEEECCCEEEEEechH
Confidence 45677777665543 33334445678999999998 556667788888887653
No 312
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=92.23 E-value=4.7 Score=34.08 Aligned_cols=38 Identities=5% Similarity=-0.136 Sum_probs=25.2
Q ss_pred CCCcEEEEEeCCCCeEEEEec-Cc---cccceeEEecCCCEE
Q 047259 35 KPHGQLLKYDPELEETTVLHE-GF---YFANGVALSKDENFV 72 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~-~~---~~pnGi~~~~dg~~L 72 (225)
...+.|-.+|.++|+...... +. .....++|+|||+++
T Consensus 200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~l 241 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLF 241 (356)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEE
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEE
Confidence 447788888988887544443 22 234456899999754
No 313
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.18 E-value=5 Score=32.29 Aligned_cols=140 Identities=13% Similarity=-0.056 Sum_probs=75.3
Q ss_pred CCcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeCC------CCEEEEEEecCCCCCceeEEeccCCC-CC
Q 047259 36 PHGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCESW------KFRCRRYWLKGPRQGRLESFIEHLPG-GP 106 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~~------~~~I~~~~~~~~~~~~~~~~~~~~~g-~P 106 (225)
....+++||+.+++++.+..- .......+. -++ .|||.--. .+.+++|++... ..+.... .|. .-
T Consensus 115 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~-~p~~r~ 188 (315)
T 4asc_A 115 CLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMD-LVYVIGGKGSDRKCLNKMCVYDPKKF---EWKELAP-MQTARS 188 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETT-EEEEECCBCTTSCBCCCEEEEETTTT---EEEECCC-CSSCCB
T ss_pred ccceEEEECCCCCcEeECCCCCCcccceeEEE-ECC-EEEEEeCCCCCCcccceEEEEeCCCC---eEEECCC-CCCchh
Confidence 356799999988888886431 112233333 333 48877533 357899998643 3333221 221 11
Q ss_pred CceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCccc
Q 047259 107 DNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATYIS 185 (225)
Q Consensus 107 d~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~~ 185 (225)
..-+.--+|+||+....... . ....+.++|++. +....-..|..+ .
T Consensus 189 ~~~~~~~~~~iyv~GG~~~~-----------------------------~--~~~~~~~yd~~~~~W~~~~~~p~~r-~- 235 (315)
T 4asc_A 189 LFGATVHDGRIIVAAGVTDT-----------------------------G--LTSSAEVYSITDNKWAPFEAFPQER-S- 235 (315)
T ss_dssp SCEEEEETTEEEEEEEECSS-----------------------------S--EEEEEEEEETTTTEEEEECCCSSCC-B-
T ss_pred ceEEEEECCEEEEEeccCCC-----------------------------C--ccceEEEEECCCCeEEECCCCCCcc-c-
Confidence 11222236789988765211 0 145789999974 454332333332 1
Q ss_pred ceeEEEEeCCEEEEeeCC--------------CCeEEEEeCCCc
Q 047259 186 FVTSAVEFEDNLYMASIQ--------------SKFVGKLPLNTP 215 (225)
Q Consensus 186 ~~t~~~~~~~~Lyv~~~~--------------~~~i~~~~~~~~ 215 (225)
...++..+++|||..=. .+.+.+|++.+.
T Consensus 236 -~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 236 -SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp -SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred -ceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 12334457888886321 245777877654
No 314
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.04 E-value=1.7 Score=39.91 Aligned_cols=82 Identities=20% Similarity=0.181 Sum_probs=50.8
Q ss_pred CcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCC--CCCCceEECCC
Q 047259 37 HGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLP--GGPDNINLAPD 114 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~--g~Pd~i~~d~~ 114 (225)
.|.|..+|+.+|++.=........++-.++..+..||+. +.++.|+.|+.+++ +. ++.-.++ ....-+++..+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG---~~-lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTG---EK-LWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTC---CE-EEEEECSSCCCSCCEEEEET
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCC---cc-ceeeeCCCCcccCceEEEEC
Confidence 489999999888754332222222344666667778877 56789999998742 21 2211122 12234777778
Q ss_pred CCEEEEeec
Q 047259 115 GSFWVALIK 123 (225)
Q Consensus 115 G~l~v~~~~ 123 (225)
|+.||+...
T Consensus 529 G~qyv~~~~ 537 (689)
T 1yiq_A 529 GEQYVTFMA 537 (689)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 999999765
No 315
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=90.67 E-value=6.8 Score=32.90 Aligned_cols=50 Identities=16% Similarity=0.116 Sum_probs=33.4
Q ss_pred CcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.|.|..+|..+++......+ ......+++ +++ ++++-+.++.|..+++..
T Consensus 152 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILTGHTGSVLCLQY--DER-VIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEESSS
T ss_pred CCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCC-EEEEEcCCCeEEEEECCC
Confidence 67888888877765555443 233455665 666 555556678999999864
No 316
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=90.52 E-value=7 Score=32.83 Aligned_cols=139 Identities=11% Similarity=0.078 Sum_probs=74.0
Q ss_pred CCCcEEEEEeCCCCeEEEEecC-ccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEecc--CCCCCCceEE
Q 047259 35 KPHGQLLKYDPELEETTVLHEG-FYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEH--LPGGPDNINL 111 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~~-~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~--~~g~Pd~i~~ 111 (225)
...|.|..+|..+++......+ ......+.+ +++ ++++-..++.|..+++... .....+... ..+....+++
T Consensus 296 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 296 SLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDN-ILVSGNADSTVKIWDIKTG--QCLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETT-EEEEEETTSCEEEEETTTC--CEEEEECSTTSCSSCEEEEEE
T ss_pred eCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCC-EEEEEeCCCeEEEEECCCC--cEEEEEccCCCCCCCEEEEEE
Confidence 3467788888766665443332 233445555 455 4555566789999998642 122222211 1122345666
Q ss_pred CCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECC-CCcEEEEEECCC-CCcccceeE
Q 047259 112 APDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDT-HGKIIMDFNDPN-ATYISFVTS 189 (225)
Q Consensus 112 d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~-~G~~~~~~~~p~-g~~~~~~t~ 189 (225)
+ +++.++... .+.|..+|. +|+.+..+.... +..-..++.
T Consensus 371 ~--~~~l~s~~~------------------------------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 412 (445)
T 2ovr_B 371 N--KNFVITSSD------------------------------------DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWR 412 (445)
T ss_dssp C--SSEEEEEET------------------------------------TSEEEEEETTTCCEEEEEEECTTGGGTCEEEE
T ss_pred C--CCEEEEEeC------------------------------------CCeEEEEECCCCceeeeeeccccCCCCceEEE
Confidence 4 566665554 456666775 478777773211 111223555
Q ss_pred EEEeC-CEEEEeeCCCC----eEEEEeCCCcc
Q 047259 190 AVEFE-DNLYMASIQSK----FVGKLPLNTPE 216 (225)
Q Consensus 190 ~~~~~-~~Lyv~~~~~~----~i~~~~~~~~~ 216 (225)
+.... +.+.++....+ +|.++++..+.
T Consensus 413 ~~~s~~~~~la~~~~dg~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 413 IRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 444 (445)
T ss_dssp EEECSSEEEEEEECSSSSSCCEEEEEECCCCC
T ss_pred EEecCCEEEEEEcccCCCCccEEEEEECCCCC
Confidence 55543 44433433333 48888887654
No 317
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.09 E-value=6.4 Score=31.70 Aligned_cols=139 Identities=14% Similarity=0.048 Sum_probs=75.4
Q ss_pred CcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeC------CCCEEEEEEecCCCCCceeEEeccCCC-CCC
Q 047259 37 HGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCES------WKFRCRRYWLKGPRQGRLESFIEHLPG-GPD 107 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~------~~~~I~~~~~~~~~~~~~~~~~~~~~g-~Pd 107 (225)
...+++||+.+.+++.+..- .......+. -++ .|||.-- ..+.+++|++... ..+.... .+. .-.
T Consensus 126 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~-~p~~r~~ 199 (318)
T 2woz_A 126 LDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPKKG---DWKDLAP-MKTPRSM 199 (318)
T ss_dssp EEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETT-EEEEECCEESSSCBCCCEEEEETTTT---EEEEECC-CSSCCBS
T ss_pred cceEEEEeCCCCCEeECCCCCCcccccEEEE-ECC-EEEEEcCCCCCCCccceEEEEcCCCC---EEEECCC-CCCCccc
Confidence 45689999988888886421 112233443 344 4887642 1357999998653 3333321 221 111
Q ss_pred ceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCC-CcEEEEEECCCCCcccc
Q 047259 108 NINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTH-GKIIMDFNDPNATYISF 186 (225)
Q Consensus 108 ~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~-G~~~~~~~~p~g~~~~~ 186 (225)
.-+.--+|.||+........ ....+.++|++ .+....-..|... .
T Consensus 200 ~~~~~~~~~iyv~GG~~~~~-------------------------------~~~~~~~yd~~~~~W~~~~~~p~~r-~-- 245 (318)
T 2woz_A 200 FGVAIHKGKIVIAGGVTEDG-------------------------------LSASVEAFDLKTNKWEVMTEFPQER-S-- 245 (318)
T ss_dssp CEEEEETTEEEEEEEEETTE-------------------------------EEEEEEEEETTTCCEEECCCCSSCC-B--
T ss_pred ceEEEECCEEEEEcCcCCCC-------------------------------ccceEEEEECCCCeEEECCCCCCcc-c--
Confidence 12222367899986542110 04578899987 4554332334332 1
Q ss_pred eeEEEEeCCEEEEeeC--------------CCCeEEEEeCCCc
Q 047259 187 VTSAVEFEDNLYMASI--------------QSKFVGKLPLNTP 215 (225)
Q Consensus 187 ~t~~~~~~~~Lyv~~~--------------~~~~i~~~~~~~~ 215 (225)
...++..+++||+..= ..+.+.+|++.+.
T Consensus 246 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 246 SISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp SCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred ceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 1234456889988631 2356888887653
No 318
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=89.79 E-value=4.9 Score=34.15 Aligned_cols=117 Identities=12% Similarity=0.142 Sum_probs=70.0
Q ss_pred ecCCCEEEEEeCCCC--EEEEEEecCCCCCceeEEeccCC-C--CCC-ceEECCCCCEEEEeecCCchhhhhhhcChhHH
Q 047259 66 SKDENFVVVCESWKF--RCRRYWLKGPRQGRLESFIEHLP-G--GPD-NINLAPDGSFWVALIKMNQTGVRAIQSCPDKW 139 (225)
Q Consensus 66 ~~dg~~Lyv~~~~~~--~I~~~~~~~~~~~~~~~~~~~~~-g--~Pd-~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r 139 (225)
+++++.||.-+...+ .|..|+++...+...-.|-...| | .+. ++-+-..+.||+....
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~---------------- 99 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNN---------------- 99 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGG----------------
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCC----------------
Confidence 445568888888888 99999997532222222211111 1 232 3445567789998877
Q ss_pred HHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEECCCCC-cccc-------eeEEEEeCCEEEEeeC---------
Q 047259 140 KLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFNDPNAT-YISF-------VTSAVEFEDNLYMASI--------- 202 (225)
Q Consensus 140 ~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~~p~g~-~~~~-------~t~~~~~~~~Lyv~~~--------- 202 (225)
...|..+|.+|+++..+...... .+.. -+.+...++.||++..
T Consensus 100 --------------------~~~i~l~n~~G~~~~k~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~ 159 (369)
T 3s9j_A 100 --------------------ISRLSSINSQGEIIRNYNFQTPEGRFTPLSFGSYYNAPAFIKDSCIFLRQEILKPDMKKE 159 (369)
T ss_dssp --------------------GTEEEEECTTCCEEEEEECCCTTSCCCCCCCBTTTTBCCEEETTEEEEECCCSSSSCCGG
T ss_pred --------------------cceEEEECCCceEEEEEecCCCccccccccccccccCcceecCceEEEeccccccccchh
Confidence 45899999999999998653322 1110 1123345677888643
Q ss_pred ---CCCeEEEEeCCCcccc
Q 047259 203 ---QSKFVGKLPLNTPEAE 218 (225)
Q Consensus 203 ---~~~~i~~~~~~~~~~~ 218 (225)
...-++.+++.+...+
T Consensus 160 ~~~k~~~~a~~dl~~~~~~ 178 (369)
T 3s9j_A 160 DWPRTHMFASQDLRTGEVK 178 (369)
T ss_dssp GGGGSEEEEEEETTTCCEE
T ss_pred hhccCceEEEEECCCCcEE
Confidence 2235666666666555
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.33 E-value=7.1 Score=31.13 Aligned_cols=145 Identities=8% Similarity=-0.075 Sum_probs=76.1
Q ss_pred CCcEEEEEeCCCCeEEEEecCc--cccceeEEecCCCEEEEEeC------CCCEEEEEEecCCCCCceeEEeccCCC-CC
Q 047259 36 PHGQLLKYDPELEETTVLHEGF--YFANGVALSKDENFVVVCES------WKFRCRRYWLKGPRQGRLESFIEHLPG-GP 106 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~~--~~pnGi~~~~dg~~Lyv~~~------~~~~I~~~~~~~~~~~~~~~~~~~~~g-~P 106 (225)
....+++||+.+++++.+..-. ..-...+.. ++ .|||.-- ..+.+++|++... ..+.... .+. .-
T Consensus 68 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~d~~~~---~W~~~~~-~p~~r~ 141 (306)
T 3ii7_A 68 PIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-EG-KIYTSGGSEVGNSALYLFECYDTRTE---SWHTKPS-MLTQRC 141 (306)
T ss_dssp BCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE-TT-EEEEECCBBTTBSCCCCEEEEETTTT---EEEEECC-CSSCCB
T ss_pred CcceEEEEeCCCCeEEECCCCCccccceeEEEE-CC-EEEEECCCCCCCcEeeeEEEEeCCCC---ceEeCCC-CcCCcc
Confidence 3568999999988888875321 112233333 34 5888642 2357999998653 3333321 221 11
Q ss_pred CceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCccc
Q 047259 107 DNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATYIS 185 (225)
Q Consensus 107 d~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~~ 185 (225)
..-++.-+|.||+........ ........+.++|++. +....-..|... .
T Consensus 142 ~~~~~~~~~~iyv~GG~~~~~---------------------------~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~ 192 (306)
T 3ii7_A 142 SHGMVEANGLIYVCGGSLGNN---------------------------VSGRVLNSCEVYDPATETWTELCPMIEAR--K 192 (306)
T ss_dssp SCEEEEETTEEEEECCEESCT---------------------------TTCEECCCEEEEETTTTEEEEECCCSSCC--B
T ss_pred eeEEEEECCEEEEECCCCCCC---------------------------CcccccceEEEeCCCCCeEEECCCccchh--h
Confidence 122222367899976542110 0000034688999874 443322233332 1
Q ss_pred ceeEEEEeCCEEEEeeC-----CCCeEEEEeCCCcc
Q 047259 186 FVTSAVEFEDNLYMASI-----QSKFVGKLPLNTPE 216 (225)
Q Consensus 186 ~~t~~~~~~~~Lyv~~~-----~~~~i~~~~~~~~~ 216 (225)
.. .++..+++||+..= ..+.+.+|++.+..
T Consensus 193 ~~-~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 193 NH-GLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp SC-EEEEETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred cc-eEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 22 23445888988731 13567888876643
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.47 E-value=6.6 Score=31.59 Aligned_cols=138 Identities=12% Similarity=-0.054 Sum_probs=73.8
Q ss_pred cEEEEEeCCCCeEEEEecCccc---cceeEEecCCCEEEEEeC--------CCCEEEEEEecCCCCCceeEEeccCCC-C
Q 047259 38 GQLLKYDPELEETTVLHEGFYF---ANGVALSKDENFVVVCES--------WKFRCRRYWLKGPRQGRLESFIEHLPG-G 105 (225)
Q Consensus 38 g~v~~~d~~~~~~~~~~~~~~~---pnGi~~~~dg~~Lyv~~~--------~~~~I~~~~~~~~~~~~~~~~~~~~~g-~ 105 (225)
..+++||+.+++++.+.. +.. -.+++.. + +.|||.-- ..+.+++|++... ..+... ..|. .
T Consensus 67 ~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~~d~~~~---~W~~~~-~~p~~r 139 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMPP-LPSPRCLFGLGEA-L-NSIYVVGGREIKDGERCLDSVMCYDRLSF---KWGESD-PLPYVV 139 (315)
T ss_dssp EEEEEEETTTTEEEECCC-BSSCEESCEEEEE-T-TEEEEECCEESSTTCCBCCCEEEEETTTT---EEEECC-CCSSCC
T ss_pred cceEEecCCCCeEEECCC-CCcchhceeEEEE-C-CEEEEEeCCcCCCCCcccceEEEECCCCC---cEeECC-CCCCcc
Confidence 459999999889887642 222 2344443 3 35887643 2357899998643 333322 1221 1
Q ss_pred CCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCcc
Q 047259 106 PDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATYI 184 (225)
Q Consensus 106 Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~ 184 (225)
-...++.-+|+||+....... .. ....+.++|+.. +....-..|..+
T Consensus 140 ~~~~~~~~~~~iyv~GG~~~~----------------------------~~--~~~~~~~yd~~~~~W~~~~~~p~~r-- 187 (315)
T 4asc_A 140 YGHTVLSHMDLVYVIGGKGSD----------------------------RK--CLNKMCVYDPKKFEWKELAPMQTAR-- 187 (315)
T ss_dssp BSCEEEEETTEEEEECCBCTT----------------------------SC--BCCCEEEEETTTTEEEECCCCSSCC--
T ss_pred cceeEEEECCEEEEEeCCCCC----------------------------Cc--ccceEEEEeCCCCeEEECCCCCCch--
Confidence 122233346789987654110 00 145789999874 444332334332
Q ss_pred cceeEEEEeCCEEEEeeCC-----CCeEEEEeCCCc
Q 047259 185 SFVTSAVEFEDNLYMASIQ-----SKFVGKLPLNTP 215 (225)
Q Consensus 185 ~~~t~~~~~~~~Lyv~~~~-----~~~i~~~~~~~~ 215 (225)
... .++..+++|||..=. .+.+.+|++.+.
T Consensus 188 ~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 188 SLF-GATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp BSC-EEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred hce-EEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 122 234458888886321 236777777654
No 321
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=86.98 E-value=11 Score=30.67 Aligned_cols=81 Identities=16% Similarity=0.229 Sum_probs=40.5
Q ss_pred cEEEEEeCCCCeEEEEecCc-cccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCC
Q 047259 38 GQLLKYDPELEETTVLHEGF-YFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGS 116 (225)
Q Consensus 38 g~v~~~d~~~~~~~~~~~~~-~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~ 116 (225)
|.|++-+-....++.+.... ....+++++++++ +|+... .+.|++-.-.++ ...+.+....+.....++++++|+
T Consensus 142 g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g~-~G~~~~S~d~gG--~tW~~~~~~~~~~~~~~~~~~~g~ 217 (327)
T 2xbg_A 142 GAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGE-YVAVSS-RGSFYSTWEPGQ--TAWEPHNRTTSRRLHNMGFTPDGR 217 (327)
T ss_dssp CCEEEESSTTSSEEEEECSCCCCEEEEEECTTSC-EEEEET-TSSEEEEECTTC--SSCEEEECCSSSCEEEEEECTTSC
T ss_pred ccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCc-EEEEEC-CCcEEEEeCCCC--CceeECCCCCCCccceeEECCCCC
Confidence 34544332223455554322 2346788888876 444332 356666542211 122222211222345677888889
Q ss_pred EEEEee
Q 047259 117 FWVALI 122 (225)
Q Consensus 117 l~v~~~ 122 (225)
+|++..
T Consensus 218 ~~~~~~ 223 (327)
T 2xbg_A 218 LWMIVN 223 (327)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 887754
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=86.48 E-value=11 Score=30.00 Aligned_cols=139 Identities=10% Similarity=-0.012 Sum_probs=75.5
Q ss_pred CcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeCC---------CCEEEEEEecCCCCCceeEEeccCCC-
Q 047259 37 HGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCESW---------KFRCRRYWLKGPRQGRLESFIEHLPG- 104 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~~---------~~~I~~~~~~~~~~~~~~~~~~~~~g- 104 (225)
...+++||+.+++++.+..- ...-...+.. ++ .||+.--. .+.+++|++... ..+.... .+.
T Consensus 117 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~-~p~~ 190 (306)
T 3ii7_A 117 LYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NG-LIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCP-MIEA 190 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECC-CSSC
T ss_pred eeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CC-EEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCC-ccch
Confidence 56799999988888887421 1112233333 44 58876421 467899998653 3433322 221
Q ss_pred CCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCc
Q 047259 105 GPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATY 183 (225)
Q Consensus 105 ~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~ 183 (225)
.-..-++--+|+||+........ ....+.++|+.. +....-..|...
T Consensus 191 r~~~~~~~~~~~i~v~GG~~~~~-------------------------------~~~~~~~yd~~~~~W~~~~~~p~~r- 238 (306)
T 3ii7_A 191 RKNHGLVFVKDKIFAVGGQNGLG-------------------------------GLDNVEYYDIKLNEWKMVSPMPWKG- 238 (306)
T ss_dssp CBSCEEEEETTEEEEECCEETTE-------------------------------EBCCEEEEETTTTEEEECCCCSCCB-
T ss_pred hhcceEEEECCEEEEEeCCCCCC-------------------------------CCceEEEeeCCCCcEEECCCCCCCc-
Confidence 11112222267898876542100 034688999874 444332333322
Q ss_pred ccceeEEEEeCCEEEEeeC-----CCCeEEEEeCCCc
Q 047259 184 ISFVTSAVEFEDNLYMASI-----QSKFVGKLPLNTP 215 (225)
Q Consensus 184 ~~~~t~~~~~~~~Lyv~~~-----~~~~i~~~~~~~~ 215 (225)
... .++..+++|||..= ..+.+.+|++.+.
T Consensus 239 -~~~-~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 239 -VTV-KCAAVGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp -SCC-EEEEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred -cce-eEEEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 122 23445888888743 3367888887764
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.95 E-value=11 Score=29.75 Aligned_cols=139 Identities=9% Similarity=0.036 Sum_probs=74.8
Q ss_pred CcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeC-----CCCEEEEEEecCCCCCceeEEeccCCC-CCCc
Q 047259 37 HGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCES-----WKFRCRRYWLKGPRQGRLESFIEHLPG-GPDN 108 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~-----~~~~I~~~~~~~~~~~~~~~~~~~~~g-~Pd~ 108 (225)
...+++||+.+++++.+..- .......+.. ++ .||+.-- ..+.+++|++... ..+... ..+. .-..
T Consensus 127 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~-~~p~~r~~~ 200 (301)
T 2vpj_A 127 HTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SG-VIYCLGGYDGLNILNSVEKYDPHTG---HWTNVT-PMATKRSGA 200 (301)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCCEEEEETTTT---EEEEEC-CCSSCCBSC
T ss_pred cceEEEEcCCCCeEEECCCCCCCcccceEEEE-CC-EEEEECCCCCCcccceEEEEeCCCC---cEEeCC-CCCcccccc
Confidence 56799999988888886421 1112233333 44 4888632 2467899998653 333332 1221 1111
Q ss_pred eEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCcccce
Q 047259 109 INLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATYISFV 187 (225)
Q Consensus 109 i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~~~~ 187 (225)
-++--++.||+....... . ....|.++|++. +....-..|... . ..
T Consensus 201 ~~~~~~~~i~v~GG~~~~-----------------------------~--~~~~v~~yd~~~~~W~~~~~~p~~r-~-~~ 247 (301)
T 2vpj_A 201 GVALLNDHIYVVGGFDGT-----------------------------A--HLSSVEAYNIRTDSWTTVTSMTTPR-C-YV 247 (301)
T ss_dssp EEEEETTEEEEECCBCSS-----------------------------S--BCCCEEEEETTTTEEEEECCCSSCC-B-SC
T ss_pred eEEEECCEEEEEeCCCCC-----------------------------c--ccceEEEEeCCCCcEEECCCCCCcc-c-ce
Confidence 222235788887654211 0 034688999874 454332334332 1 12
Q ss_pred eEEEEeCCEEEEeeCCC-----CeEEEEeCCCc
Q 047259 188 TSAVEFEDNLYMASIQS-----KFVGKLPLNTP 215 (225)
Q Consensus 188 t~~~~~~~~Lyv~~~~~-----~~i~~~~~~~~ 215 (225)
.++..+++||+..=.. +.+.+|++.+.
T Consensus 248 -~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 248 -GATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp -EEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred -eEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 2344588898874221 56788887654
No 324
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=85.79 E-value=20 Score=32.51 Aligned_cols=53 Identities=9% Similarity=0.103 Sum_probs=31.0
Q ss_pred CCCcEEEEEeCCCCeEEEEecC------ccccceeEEecCCCEEEEEeCC-----CCEEEEEEecC
Q 047259 35 KPHGQLLKYDPELEETTVLHEG------FYFANGVALSKDENFVVVCESW-----KFRCRRYWLKG 89 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~~------~~~pnGi~~~~dg~~Lyv~~~~-----~~~I~~~~~~~ 89 (225)
...|+|+.+|.++|+..=.... .......++. + +.+||.... .+.|+.++.++
T Consensus 124 ~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~-~~v~vg~~~~~~~~~g~v~a~D~~t 187 (668)
T 1kv9_A 124 TLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV-K-GKVIIGNGGAEYGVRGFVSAYDADT 187 (668)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE-T-TEEEECCBCTTTCCBCEEEEEETTT
T ss_pred cCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE-C-CEEEEeCCCCCcCCCCEEEEEECCC
Confidence 3468999999888874322211 1112233333 3 358887654 47888888764
No 325
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=84.79 E-value=1.8 Score=36.32 Aligned_cols=53 Identities=8% Similarity=-0.155 Sum_probs=36.2
Q ss_pred CcEEEEEeCCCC-eEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELE-ETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~-~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
.+.|..+|..++ ....+.........++|+|++..++++-..++.|..+++..
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 455555664333 33444444556688999999876777777888999998764
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.51 E-value=14 Score=29.51 Aligned_cols=139 Identities=10% Similarity=-0.043 Sum_probs=73.8
Q ss_pred CcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeC-----CCCEEEEEEecCCCCCceeEEeccCCC-C-CC
Q 047259 37 HGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCES-----WKFRCRRYWLKGPRQGRLESFIEHLPG-G-PD 107 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~-----~~~~I~~~~~~~~~~~~~~~~~~~~~g-~-Pd 107 (225)
...+++||+.+++++.+..- ...-...+.. ++ .|||.-- ..+.+++|++... ..+.... .+. . --
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~-~p~~r~~~ 162 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI-DG-HIYAVGGSHGCIHHNSVERYEPERD---EWHLVAP-MLTRRIGV 162 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCEEEEE-TT-EEEEECCEETTEECCCEEEEETTTT---EEEECCC-CSSCCBSC
T ss_pred cceEEEECCCCCeEeECCCCCcCccccEEEEE-CC-EEEEEcCCCCCcccccEEEECCCCC---eEeECCC-CCccccce
Confidence 45689999988888886421 1112233333 44 4888732 2357889998643 3333221 221 1 11
Q ss_pred ceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCcccc
Q 047259 108 NINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATYISF 186 (225)
Q Consensus 108 ~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~~~ 186 (225)
.+++- ++.||+....... . ....+.++|++. +....-..|... ..
T Consensus 163 ~~~~~-~~~iyv~GG~~~~-----------------------------~--~~~~~~~yd~~~~~W~~~~~~p~~r--~~ 208 (308)
T 1zgk_A 163 GVAVL-NRLLYAVGGFDGT-----------------------------N--RLNSAECYYPERNEWRMITAMNTIR--SG 208 (308)
T ss_dssp EEEEE-TTEEEEECCBCSS-----------------------------C--BCCCEEEEETTTTEEEECCCCSSCC--BS
T ss_pred EEEEE-CCEEEEEeCCCCC-----------------------------C--cCceEEEEeCCCCeEeeCCCCCCcc--cc
Confidence 22222 6789987654211 0 034688999874 443222223322 12
Q ss_pred eeEEEEeCCEEEEeeCC-----CCeEEEEeCCCcc
Q 047259 187 VTSAVEFEDNLYMASIQ-----SKFVGKLPLNTPE 216 (225)
Q Consensus 187 ~t~~~~~~~~Lyv~~~~-----~~~i~~~~~~~~~ 216 (225)
. .++..+++|||-.=. .+.+.+|++.+..
T Consensus 209 ~-~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 209 A-GVCVLHNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp C-EEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred c-eEEEECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 2 234458899887422 3678888876643
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=83.29 E-value=16 Score=29.26 Aligned_cols=139 Identities=13% Similarity=-0.001 Sum_probs=73.0
Q ss_pred cEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeCC-------CCEEEEEEecCCCCCceeEEeccCCC-CCC
Q 047259 38 GQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCESW-------KFRCRRYWLKGPRQGRLESFIEHLPG-GPD 107 (225)
Q Consensus 38 g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~~-------~~~I~~~~~~~~~~~~~~~~~~~~~g-~Pd 107 (225)
..+++||+.+++++.+..- ...-.+++.. ++ .|||.--. .+.+++|++... ..+... ..|. .-.
T Consensus 78 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~-~~p~~r~~ 151 (318)
T 2woz_A 78 SYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DD-KIYVVAGKDLQTEASLDSVLCYDPVAA---KWSEVK-NLPIKVYG 151 (318)
T ss_dssp BEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TT-EEEEEEEEBTTTCCEEEEEEEEETTTT---EEEEEC-CCSSCEES
T ss_pred ccEEEEeCCCCcEEECCCCCccccccceEEE-CC-EEEEEcCccCCCCcccceEEEEeCCCC---CEeECC-CCCCcccc
Confidence 3489999988899876421 1122344443 33 58876421 257889988643 333332 1221 111
Q ss_pred ceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCcccc
Q 047259 108 NINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATYISF 186 (225)
Q Consensus 108 ~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~~~ 186 (225)
.-++--+|.||+....... .. ....+.++|+.. +....-..|... ..
T Consensus 152 ~~~~~~~~~iyv~GG~~~~----------------------------~~--~~~~~~~yd~~~~~W~~~~~~p~~r--~~ 199 (318)
T 2woz_A 152 HNVISHNGMIYCLGGKTDD----------------------------KK--CTNRVFIYNPKKGDWKDLAPMKTPR--SM 199 (318)
T ss_dssp CEEEEETTEEEEECCEESS----------------------------SC--BCCCEEEEETTTTEEEEECCCSSCC--BS
T ss_pred cEEEEECCEEEEEcCCCCC----------------------------CC--ccceEEEEcCCCCEEEECCCCCCCc--cc
Confidence 1222246789987653110 00 134689999874 444332333332 11
Q ss_pred eeEEEEeCCEEEEeeC-----CCCeEEEEeCCCc
Q 047259 187 VTSAVEFEDNLYMASI-----QSKFVGKLPLNTP 215 (225)
Q Consensus 187 ~t~~~~~~~~Lyv~~~-----~~~~i~~~~~~~~ 215 (225)
. .++..+++|||..= ..+.+.+|++.+.
T Consensus 200 ~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 200 F-GVAIHKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp C-EEEEETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred c-eEEEECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 2 23446788888741 1245777777654
No 328
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.04 E-value=15 Score=30.58 Aligned_cols=58 Identities=14% Similarity=0.136 Sum_probs=31.2
Q ss_pred ceeEEec-CCCEEEEEeCCCCEEEEEEecCCCCCceeEEecc-----CC------C-CCCceEECCC--CCEEEEee
Q 047259 61 NGVALSK-DENFVVVCESWKFRCRRYWLKGPRQGRLESFIEH-----LP------G-GPDNINLAPD--GSFWVALI 122 (225)
Q Consensus 61 nGi~~~~-dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~-----~~------g-~Pd~i~~d~~--G~l~v~~~ 122 (225)
..|+++| +.+.||++... +.|++.+-.+. ..+.+... ++ + ....|+++++ +.||++..
T Consensus 180 ~~i~~d~~~~~~l~vg~~~-ggl~~s~DgG~---tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~ 252 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSS-GGVFESTDAGT---DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH 252 (394)
T ss_dssp EEEEECTTCTTCEEEEEET-BEEEEESSTTS---SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET
T ss_pred eEEEECCCCCCEEEEEECC-CCEEEECCCCC---CceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC
Confidence 4688887 34468888643 45776643332 22222111 11 0 1235788876 77888753
No 329
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=82.25 E-value=17 Score=28.73 Aligned_cols=142 Identities=13% Similarity=-0.080 Sum_probs=76.6
Q ss_pred CcEEEEEeCCCCeEEEEecCc--cccceeEEecCCCEEEEEeC-----CCCEEEEEEecCCCCCceeEEeccCCC-CCCc
Q 047259 37 HGQLLKYDPELEETTVLHEGF--YFANGVALSKDENFVVVCES-----WKFRCRRYWLKGPRQGRLESFIEHLPG-GPDN 108 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~--~~pnGi~~~~dg~~Lyv~~~-----~~~~I~~~~~~~~~~~~~~~~~~~~~g-~Pd~ 108 (225)
...+++||+.+++++.+..-. ..-...+.. ++ .||+.-- ..+.+++|++........+.... .+. .-..
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~-~p~~r~~~ 106 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSL-HD-RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAP-MNVRRGLA 106 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECC-CSSCCBSC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEE-CC-EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCC-CCCCccce
Confidence 457999999888888864211 112233333 33 5887632 23579999987532111444332 221 1111
Q ss_pred eEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCcccce
Q 047259 109 INLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATYISFV 187 (225)
Q Consensus 109 i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~~~~ 187 (225)
.+.--+|.||+....... . ....+.++|+.. +....-..|... ...
T Consensus 107 ~~~~~~~~lyv~GG~~~~-----------------------------~--~~~~~~~~d~~~~~W~~~~~~p~~r--~~~ 153 (301)
T 2vpj_A 107 GATTLGDMIYVSGGFDGS-----------------------------R--RHTSMERYDPNIDQWSMLGDMQTAR--EGA 153 (301)
T ss_dssp EEEEETTEEEEECCBCSS-----------------------------C--BCCEEEEEETTTTEEEEEEECSSCC--BSC
T ss_pred eEEEECCEEEEEcccCCC-----------------------------c--ccceEEEEcCCCCeEEECCCCCCCc--ccc
Confidence 222235789988654211 0 145789999874 554433444332 122
Q ss_pred eEEEEeCCEEEEeeC-----CCCeEEEEeCCCc
Q 047259 188 TSAVEFEDNLYMASI-----QSKFVGKLPLNTP 215 (225)
Q Consensus 188 t~~~~~~~~Lyv~~~-----~~~~i~~~~~~~~ 215 (225)
+ ++..+++||+..= ..+.+.+|++.+.
T Consensus 154 ~-~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 154 G-LVVASGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp E-EEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred e-EEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 2 3345889998631 2466788877654
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=81.53 E-value=18 Score=28.76 Aligned_cols=139 Identities=7% Similarity=-0.127 Sum_probs=73.6
Q ss_pred CcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeCC---------CCEEEEEEecCCCCCceeEEeccCCC-
Q 047259 37 HGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCESW---------KFRCRRYWLKGPRQGRLESFIEHLPG- 104 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~~---------~~~I~~~~~~~~~~~~~~~~~~~~~g- 104 (225)
...+++||+.+++++.+..- ...-.+++.. + +.||+.--. .+.+++|++... ..+.... .+.
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~---~W~~~~~-~p~~ 111 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-G-GLLYAVGGRNNSPDGNTDSSALDCYNPMTN---QWSPCAP-MSVP 111 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-T-TEEEEECCEEEETTEEEECCCEEEEETTTT---EEEECCC-CSSC
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEE-C-CEEEEECCCcCCCCCCeecceEEEECCCCC---eEeECCC-CCcC
Confidence 45799999998999887321 1112344443 3 358876322 257889988643 3333221 221
Q ss_pred CCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCc
Q 047259 105 GPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATY 183 (225)
Q Consensus 105 ~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~ 183 (225)
.-...+.--+|.||+........ ....+.++|+.. +....-..|...
T Consensus 112 r~~~~~~~~~~~iyv~GG~~~~~-------------------------------~~~~~~~yd~~~~~W~~~~~~p~~r- 159 (308)
T 1zgk_A 112 RNRIGVGVIDGHIYAVGGSHGCI-------------------------------HHNSVERYEPERDEWHLVAPMLTRR- 159 (308)
T ss_dssp CBTCEEEEETTEEEEECCEETTE-------------------------------ECCCEEEEETTTTEEEECCCCSSCC-
T ss_pred ccccEEEEECCEEEEEcCCCCCc-------------------------------ccccEEEECCCCCeEeECCCCCccc-
Confidence 11112222367899876542110 034688999874 443322334332
Q ss_pred ccceeEEEEeCCEEEEeeCC-----CCeEEEEeCCCc
Q 047259 184 ISFVTSAVEFEDNLYMASIQ-----SKFVGKLPLNTP 215 (225)
Q Consensus 184 ~~~~t~~~~~~~~Lyv~~~~-----~~~i~~~~~~~~ 215 (225)
...+ ++..+++||+-.=. .+.+.+|++.+.
T Consensus 160 -~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 160 -IGVG-VAVLNRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp -BSCE-EEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred -cceE-EEEECCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 1222 33458899986311 456888877654
No 331
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=80.32 E-value=11 Score=33.74 Aligned_cols=84 Identities=15% Similarity=0.069 Sum_probs=48.7
Q ss_pred CCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCC--CCCceEECC
Q 047259 36 PHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPG--GPDNINLAP 113 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g--~Pd~i~~d~ 113 (225)
..|.|+.+|+.+|+..=........++-.+.-.+..+|+.. .++.|+.|+.+++ + .++.-.++. ...-+++..
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~-~dg~l~A~D~~tG---~-~lW~~~~~~g~~a~P~~y~~ 538 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGT-GDGYFKAFDAKSG---K-ELWKFQTGSGIVSPPITWEQ 538 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEEC-TTSEEEEEETTTC---C-EEEEEECSSCCCSCCEEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEEC-CCCcEEEEECCCC---C-EEEEecCCCCcccCceEEEE
Confidence 46899999998887432211111122323333455688864 5789999998642 2 122111222 223367778
Q ss_pred CCCEEEEeecC
Q 047259 114 DGSFWVALIKM 124 (225)
Q Consensus 114 ~G~l~v~~~~~ 124 (225)
+|+.||+....
T Consensus 539 ~G~qYv~~~~G 549 (582)
T 1flg_A 539 DGEQYLGVTVG 549 (582)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEcc
Confidence 89999997763
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=79.20 E-value=27 Score=31.93 Aligned_cols=84 Identities=8% Similarity=0.037 Sum_probs=48.8
Q ss_pred EEEEEeCCCCeEEEEecC--cc----ccceeEEecCCCEEEEEeCC-------CCEEEEEEecCCCC---CceeEEeccC
Q 047259 39 QLLKYDPELEETTVLHEG--FY----FANGVALSKDENFVVVCESW-------KFRCRRYWLKGPRQ---GRLESFIEHL 102 (225)
Q Consensus 39 ~v~~~d~~~~~~~~~~~~--~~----~pnGi~~~~dg~~Lyv~~~~-------~~~I~~~~~~~~~~---~~~~~~~~~~ 102 (225)
.+++||+.+++++.+... +. ....++++.+.+.|||.--. .+.+++|++..... -.++.... .
T Consensus 514 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~-~ 592 (695)
T 2zwa_A 514 AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ-H 592 (695)
T ss_dssp SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE-C
T ss_pred CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC-C
Confidence 799999998999887542 21 22346667664568887532 36799999976421 00222222 1
Q ss_pred CCCC---CceEECCCCCEEEEeec
Q 047259 103 PGGP---DNINLAPDGSFWVALIK 123 (225)
Q Consensus 103 ~g~P---d~i~~d~~G~l~v~~~~ 123 (225)
+..| -.+++-.+|.||+....
T Consensus 593 p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 593 PLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp GGGCCBSCEEEEEETTEEEEECCB
T ss_pred CCCCcccceEEEeCCCEEEEECCc
Confidence 1112 23344444789997654
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=78.05 E-value=23 Score=27.89 Aligned_cols=142 Identities=7% Similarity=-0.092 Sum_probs=75.6
Q ss_pred CcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeCC-------CCEEEEEEecCCCCCceeEEeccCCC-CC
Q 047259 37 HGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCESW-------KFRCRRYWLKGPRQGRLESFIEHLPG-GP 106 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~~-------~~~I~~~~~~~~~~~~~~~~~~~~~g-~P 106 (225)
...+++||+.+++++.+..- .......+.. ++ .||+.--. .+.+++|++... ..+... ..+. .-
T Consensus 123 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~-~~p~~r~ 196 (302)
T 2xn4_A 123 LSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GG-LLYAVGGYDVASRQCLSTVECYNATTN---EWTYIA-EMSTRRS 196 (302)
T ss_dssp EEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEECCEETTTTEECCCEEEEETTTT---EEEEEC-CCSSCCB
T ss_pred CceEEEEeCCCCeEeecCCCCCcccCceEEEE-CC-EEEEEeCCCCCCCccccEEEEEeCCCC---cEEECC-CCccccc
Confidence 35688999988888887421 1112233333 33 58886421 357899998643 333332 1221 11
Q ss_pred CceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCccc
Q 047259 107 DNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATYIS 185 (225)
Q Consensus 107 d~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~~ 185 (225)
..-++--++.||+....... . ....+.++|++. +....-..|...
T Consensus 197 ~~~~~~~~~~iyv~GG~~~~-----------------------------~--~~~~~~~yd~~~~~W~~~~~~~~~r--- 242 (302)
T 2xn4_A 197 GAGVGVLNNLLYAVGGHDGP-----------------------------L--VRKSVEVYDPTTNAWRQVADMNMCR--- 242 (302)
T ss_dssp SCEEEEETTEEEEECCBSSS-----------------------------S--BCCCEEEEETTTTEEEEECCCSSCC---
T ss_pred cccEEEECCEEEEECCCCCC-----------------------------c--ccceEEEEeCCCCCEeeCCCCCCcc---
Confidence 11122235789987654211 0 034689999874 454332333332
Q ss_pred ceeEEEEeCCEEEEeeCC-----CCeEEEEeCCCcccc
Q 047259 186 FVTSAVEFEDNLYMASIQ-----SKFVGKLPLNTPEAE 218 (225)
Q Consensus 186 ~~t~~~~~~~~Lyv~~~~-----~~~i~~~~~~~~~~~ 218 (225)
....++..+++|||..=. .+.+.+|++.+..=+
T Consensus 243 ~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 243 RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 122244568899887421 245888888765433
No 334
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=77.95 E-value=39 Score=30.38 Aligned_cols=52 Identities=15% Similarity=0.104 Sum_probs=30.1
Q ss_pred CCcEEEEEeCCCCeEEEE--ecCc----cccceeEEecCCCEEEEEeC-----CCCEEEEEEecC
Q 047259 36 PHGQLLKYDPELEETTVL--HEGF----YFANGVALSKDENFVVVCES-----WKFRCRRYWLKG 89 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~--~~~~----~~pnGi~~~~dg~~Lyv~~~-----~~~~I~~~~~~~ 89 (225)
..++|+.+|.++|++.-. .... ..-...++. ++ .|||... ..+.|+.|+.++
T Consensus 129 ~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~T 191 (599)
T 1w6s_A 129 LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKT 191 (599)
T ss_dssp TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTT
T ss_pred CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCC
Confidence 468999999888874322 2111 111222333 33 5888764 257888888764
No 335
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=76.90 E-value=25 Score=27.69 Aligned_cols=139 Identities=11% Similarity=-0.074 Sum_probs=75.0
Q ss_pred CcEEEEEeCCCCeEEEEecC--ccccceeEEecCCCEEEEEeC-----CCCEEEEEEecCCCCCceeEEeccCCC-CCCc
Q 047259 37 HGQLLKYDPELEETTVLHEG--FYFANGVALSKDENFVVVCES-----WKFRCRRYWLKGPRQGRLESFIEHLPG-GPDN 108 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~--~~~pnGi~~~~dg~~Lyv~~~-----~~~~I~~~~~~~~~~~~~~~~~~~~~g-~Pd~ 108 (225)
...+++||+.+++++.+..- ...-.+++.. + +.|||.-- ..+.+++|++... ..+.... .+. .-..
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~-~p~~r~~~ 102 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPSRRCRAGMVYM-A-GLVFAVGGFNGSLRVRTVDSYDPVKD---QWTSVAN-MRDRRSTL 102 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T-TEEEEESCBCSSSBCCCEEEEETTTT---EEEEECC-CSSCCBSC
T ss_pred CCcEEEEcCcCCcEeEcccCCcccccceEEEE-C-CEEEEEeCcCCCccccceEEECCCCC---ceeeCCC-CCccccce
Confidence 45689999988888876321 1122344443 3 35888632 2357899998643 3333322 221 1111
Q ss_pred eEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCcccce
Q 047259 109 INLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATYISFV 187 (225)
Q Consensus 109 i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~~~~~ 187 (225)
.+.--+|.||+....... . ....+.++|+.. +....-..|... ...
T Consensus 103 ~~~~~~~~iyv~GG~~~~-----------------------------~--~~~~~~~~d~~~~~W~~~~~~p~~r--~~~ 149 (302)
T 2xn4_A 103 GAAVLNGLLYAVGGFDGS-----------------------------T--GLSSVEAYNIKSNEWFHVAPMNTRR--SSV 149 (302)
T ss_dssp EEEEETTEEEEEEEECSS-----------------------------C--EEEEEEEEETTTTEEEEECCCSSCC--BSC
T ss_pred EEEEECCEEEEEcCCCCC-----------------------------c--cCceEEEEeCCCCeEeecCCCCCcc--cCc
Confidence 222236789987654211 0 145789999874 444332233322 122
Q ss_pred eEEEEeCCEEEEeeC-------CCCeEEEEeCCCc
Q 047259 188 TSAVEFEDNLYMASI-------QSKFVGKLPLNTP 215 (225)
Q Consensus 188 t~~~~~~~~Lyv~~~-------~~~~i~~~~~~~~ 215 (225)
.++..+++||+..= ..+.+.+|++.+.
T Consensus 150 -~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 150 -GVGVVGGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp -EEEEETTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred -eEEEECCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 23446889998631 1456888887654
No 336
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=76.81 E-value=7.3 Score=32.42 Aligned_cols=50 Identities=14% Similarity=0.038 Sum_probs=21.4
Q ss_pred CCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 36 PHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
..|.|+.+|..+|+..-... .+..+..+|+++.||++.. .+.|+.++.++
T Consensus 100 ~dg~v~a~D~~tG~~~w~~~---~~~~~~~~p~~~~v~~~~~-dg~v~a~d~~t 149 (369)
T 2hz6_A 100 KQDIWYVIDLLTGEKQQTLS---SAFADSLSPSTSLLYLGRT-EYTITMYDTKT 149 (369)
T ss_dssp EEEEEEEECCC-------------------------EEEEEE-EEEEECCCSSS
T ss_pred CCCEEEEEECCCCcEEEEec---CCCcccccccCCEEEEEec-CCEEEEEECCC
Confidence 45779999988776533221 1223455667777888753 46888888764
No 337
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=76.37 E-value=6.4 Score=32.80 Aligned_cols=53 Identities=9% Similarity=0.003 Sum_probs=34.9
Q ss_pred CCCcEEEEEeCCCCeEEE-EecCccccceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 35 KPHGQLLKYDPELEETTV-LHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~-~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
...|.|..+|..+++... .......-..++|+|||+.|-++. .+.|..+++.+
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as--~~Gv~lvrL~g 389 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT--EGSVLLTRLMG 389 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE--SSEEEEEEEGG
T ss_pred CCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEeC
Confidence 347889889977665433 233344568899999999776554 34666666643
No 338
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=75.68 E-value=19 Score=32.38 Aligned_cols=107 Identities=10% Similarity=0.032 Sum_probs=61.5
Q ss_pred CcEEEcC-CCcEEEEcCCCC--CCcchhhhhcccCCCCcEEEEEeCCCCeEEEEec----CccccceeEEecCCCEEEEE
Q 047259 3 NDVIEAS-DGSLYFTVSSKK--YTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHE----GFYFANGVALSKDENFVVVC 75 (225)
Q Consensus 3 ndv~~~~-dG~iy~td~~~~--~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~----~~~~pnGi~~~~dg~~Lyv~ 75 (225)
...++.+ +|+||+.=.... ++. .......+++||+.+++++.+.. ...+..++++..||+ ||+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~--------~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~ 259 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGG--------SPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVT 259 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCS--------CCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-EEEE
T ss_pred eeEEEEecCCEEEEEeccccccccc--------CCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC-EEEe
Confidence 4566676 888888732210 110 01123368999998888765432 123445688888887 7776
Q ss_pred eC-CCCEEEEEEecCCCCCceeEEeccCCC-CC-CceEECCCCCEEEEee
Q 047259 76 ES-WKFRCRRYWLKGPRQGRLESFIEHLPG-GP-DNINLAPDGSFWVALI 122 (225)
Q Consensus 76 ~~-~~~~I~~~~~~~~~~~~~~~~~~~~~g-~P-d~i~~d~~G~l~v~~~ 122 (225)
-- ....+++|++... ..+.... .+. .- -..++-++|+|||...
T Consensus 260 GG~~~~~v~~yd~~t~---~W~~~~~-~~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 260 GGNDAKKTSLYDSSSD---SWIPGPD-MQVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp CSSSTTCEEEEEGGGT---EEEECCC-CSSCCSSCEEEECTTSCEEEECC
T ss_pred CCCCCCceEEecCcCC---ceeECCC-CCccccccceEEecCCeEEEEeC
Confidence 54 3458999998742 3332221 221 11 1345556889998876
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=74.29 E-value=49 Score=30.00 Aligned_cols=107 Identities=12% Similarity=0.031 Sum_probs=65.2
Q ss_pred CCCcEEEcCCCcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCC-------C------CeEEEEecCccccceeEEec
Q 047259 1 FTNDVIEASDGSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPE-------L------EETTVLHEGFYFANGVALSK 67 (225)
Q Consensus 1 ~pndv~~~~dG~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-------~------~~~~~~~~~~~~pnGi~~~~ 67 (225)
.|+++.++|||+-.+...- ....+..+|.+ . ..+..-.+....|--.+|++
T Consensus 324 sPHGv~vsPDGkyi~v~GK----------------LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~ 387 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGK----------------LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG 387 (638)
T ss_dssp SCCCEEECTTSCEEEEECT----------------TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS
T ss_pred CCcceeeCCCCCEEEEcCC----------------CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC
Confidence 4899999999964444321 13344444432 0 11122233456799999999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCC---CCCc-eeEEec-----cCCC---CCCceEECCCCCEEEEeecC
Q 047259 68 DENFVVVCESWKFRCRRYWLKGP---RQGR-LESFIE-----HLPG---GPDNINLAPDGSFWVALIKM 124 (225)
Q Consensus 68 dg~~Lyv~~~~~~~I~~~~~~~~---~~~~-~~~~~~-----~~~g---~Pd~i~~d~~G~l~v~~~~~ 124 (225)
+| ..|.+-.-..+|.+++++.. ..|. .....+ ..|| .+.|-+.+++|+++++....
T Consensus 388 ~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~ 455 (638)
T 3sbq_A 388 RG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKF 455 (638)
T ss_dssp SS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESC
T ss_pred CC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccc
Confidence 99 59999999999999998631 0111 111222 1222 24455668999999998774
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=74.10 E-value=17 Score=30.28 Aligned_cols=52 Identities=10% Similarity=-0.184 Sum_probs=27.6
Q ss_pred CcEEEEEeCCCCeEEEEecCc--cccce---eEEecCCCEEEEEe-CCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLHEGF--YFANG---VALSKDENFVVVCE-SWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~--~~pnG---i~~~~dg~~Lyv~~-~~~~~I~~~~~~~ 89 (225)
.|.|+.+|.++|+..=..+.. .-+-+ -+. +.+..+|+.+ +.+++|+.++.++
T Consensus 19 dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~-~~~~~~~vv~p~~dG~l~a~~~~~ 76 (339)
T 2be1_A 19 EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSR-LETYETLIIEPFGDGNIYYFNAHQ 76 (339)
T ss_dssp TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCT-TTSSEEEEECCSTTTEEEEEETTT
T ss_pred CCeEEEEECCCCcEEEEecCCccCCcEEecCCcc-ccCCcEEEEEECCCCEEEEEECCC
Confidence 577888887777543222111 11100 000 1223477776 6788888888753
No 341
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=72.17 E-value=41 Score=27.85 Aligned_cols=25 Identities=8% Similarity=-0.287 Sum_probs=15.6
Q ss_pred eeEEec-C-CCEEEEEeCCCCEEEEEEe
Q 047259 62 GVALSK-D-ENFVVVCESWKFRCRRYWL 87 (225)
Q Consensus 62 Gi~~~~-d-g~~Lyv~~~~~~~I~~~~~ 87 (225)
.|+++| + .+.||+... .+.|+|.+-
T Consensus 119 ~l~~~~~~~~~~l~~g~~-~ggl~~S~D 145 (394)
T 3b7f_A 119 WLTPGHASEPGTWYAGTS-PQGLFRSTD 145 (394)
T ss_dssp EEEECCTTSTTCEEEEEE-TTEEEEESS
T ss_pred EEEeCCCCCCCEEEEEec-CCcEEEEcC
Confidence 477776 2 455888653 357877753
No 342
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=71.40 E-value=15 Score=30.90 Aligned_cols=51 Identities=16% Similarity=0.035 Sum_probs=35.8
Q ss_pred CCcEEEEEeCCCCeEEEEecCc-cccc-eeEEecCCCEEEEEeCCCCEEEEEEe
Q 047259 36 PHGQLLKYDPELEETTVLHEGF-YFAN-GVALSKDENFVVVCESWKFRCRRYWL 87 (225)
Q Consensus 36 ~~g~v~~~d~~~~~~~~~~~~~-~~pn-Gi~~~~dg~~Lyv~~~~~~~I~~~~~ 87 (225)
..+.|..+|..+|+......+. ..+. .++|+|||++| ++-+.++.|..+++
T Consensus 303 ~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L-aSGS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL-LAGQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE-EEECTTSCEEEEEE
T ss_pred CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE-EEEECCCcEEEecC
Confidence 4678888998888866655543 3345 48999999854 56667788877764
No 343
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=69.42 E-value=43 Score=27.03 Aligned_cols=57 Identities=11% Similarity=0.088 Sum_probs=29.2
Q ss_pred cceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEeccCCCCCCceEECCCCCEEEEe
Q 047259 60 ANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFIEHLPGGPDNINLAPDGSFWVAL 121 (225)
Q Consensus 60 pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd~i~~d~~G~l~v~~ 121 (225)
+.+|+..++++ +|++.. .+.|++-. +++ ...+......++...+++++++|.+|++.
T Consensus 124 ~~~i~~~~~~~-~~~~~~-~g~v~~S~-DgG--~tW~~~~~~~~~~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 124 PRLIKALGNGS-AEMITN-VGAIYRTK-DSG--KNWQALVQEAIGVMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp EEEEEEEETTE-EEEEET-TCCEEEES-STT--SSEEEEECSCCCCEEEEEECTTSCEEEEE
T ss_pred eEEEEEECCCC-EEEEeC-CccEEEEc-CCC--CCCEEeecCCCcceEEEEEcCCCcEEEEE
Confidence 46777777665 665543 35566532 321 12333221122223466777777777654
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=67.75 E-value=47 Score=26.81 Aligned_cols=80 Identities=14% Similarity=-0.042 Sum_probs=42.8
Q ss_pred cEEEEEeCC--CCeEEEEecCc---cccceeEEecCCCEEEEEeCC----------CCEEEEEEecCCCCCceeEEeccC
Q 047259 38 GQLLKYDPE--LEETTVLHEGF---YFANGVALSKDENFVVVCESW----------KFRCRRYWLKGPRQGRLESFIEHL 102 (225)
Q Consensus 38 g~v~~~d~~--~~~~~~~~~~~---~~pnGi~~~~dg~~Lyv~~~~----------~~~I~~~~~~~~~~~~~~~~~~~~ 102 (225)
..+++||.. +.+++.+..-. ..-..++.- ++ .|||.--. .+.+++|++... ..+.... .
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~-~ 104 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-DG-NLYVFGGIGKNSEGLTQVFNDVHKYNPKTN---SWVKLMS-H 104 (357)
T ss_dssp TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-TT-EEEEECCEEECTTSCEEECCCEEEEETTTT---EEEECSC-C
T ss_pred CeEEEEccccCCCCeeECCCCCCCcCccceEEEE-CC-EEEEEcCCCCCCCccceeeccEEEEeCCCC---cEEECCC-C
Confidence 379999986 37788764311 112334433 33 58875322 357899998643 3333222 1
Q ss_pred CCCCC-ce-EECCCCCEEEEeec
Q 047259 103 PGGPD-NI-NLAPDGSFWVALIK 123 (225)
Q Consensus 103 ~g~Pd-~i-~~d~~G~l~v~~~~ 123 (225)
+..|. +. ++.-+|+||+....
T Consensus 105 ~p~~r~~~~~~~~~~~iyv~GG~ 127 (357)
T 2uvk_A 105 APMGMAGHVTFVHNGKAYVTGGV 127 (357)
T ss_dssp CSSCCSSEEEEEETTEEEEEECC
T ss_pred CCcccccceEEEECCEEEEEeCc
Confidence 11121 21 22257889997754
No 345
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=64.39 E-value=41 Score=28.52 Aligned_cols=26 Identities=15% Similarity=-0.034 Sum_probs=21.9
Q ss_pred cceeEEecCCCEEEEEeCCCCEEEEEEecC
Q 047259 60 ANGVALSKDENFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 60 pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~ 89 (225)
+..+++ |+++|+|+ ..+.|..|++..
T Consensus 90 V~~l~f--d~~~L~v~--~~~~l~v~dv~s 115 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS--TRNALYSLDLEE 115 (388)
T ss_dssp EEEEEE--ETTEEEEE--ESSEEEEEESSS
T ss_pred eeEEEE--CCCEEEEE--cCCcEEEEEchh
Confidence 889999 88999999 447899999864
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=59.00 E-value=1.1e+02 Score=27.90 Aligned_cols=139 Identities=8% Similarity=-0.020 Sum_probs=75.5
Q ss_pred CcEEEEEeCCCCeEEEEe-c----Ccc---ccceeEEec-CCCEEEEEeC------CCCEEEEEEecCCCCCceeEEecc
Q 047259 37 HGQLLKYDPELEETTVLH-E----GFY---FANGVALSK-DENFVVVCES------WKFRCRRYWLKGPRQGRLESFIEH 101 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~-~----~~~---~pnGi~~~~-dg~~Lyv~~~------~~~~I~~~~~~~~~~~~~~~~~~~ 101 (225)
...+++||+.+++++.+. . .+. .-...+.-. ++ .|||.-- ..+.+++|++... .++... .
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd~~t~---~W~~~~-~ 485 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFDMKTR---EWSMIK-S 485 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEECCBSSTTCBCCCCEEEETTTT---EEEECC-C
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC-EEEEEcCCCCCCCccccEEEEeCCCC---cEEECC-C
Confidence 457999999888898876 3 122 223444443 54 4888632 1357899998642 333322 1
Q ss_pred CCC-CCC-ceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCCcEEEEEE--
Q 047259 102 LPG-GPD-NINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHGKIIMDFN-- 177 (225)
Q Consensus 102 ~~g-~Pd-~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G~~~~~~~-- 177 (225)
.|. .-. ..++-.+|.|||...... ...+.++|+....=..+.
T Consensus 486 ~p~~R~~h~~~~~~~~~iyv~GG~~~----------------------------------~~~v~~yd~~t~~W~~~~~~ 531 (695)
T 2zwa_A 486 LSHTRFRHSACSLPDGNVLILGGVTE----------------------------------GPAMLLYNVTEEIFKDVTPK 531 (695)
T ss_dssp CSBCCBSCEEEECTTSCEEEECCBCS----------------------------------SCSEEEEETTTTEEEECCCS
T ss_pred CCCCcccceEEEEcCCEEEEECCCCC----------------------------------CCCEEEEECCCCceEEccCC
Confidence 221 111 233324789999865421 116888988743322333
Q ss_pred --CCCCCcccceeEEEEe-C-CEEEEeeC-------CCCeEEEEeCCCcc
Q 047259 178 --DPNATYISFVTSAVEF-E-DNLYMASI-------QSKFVGKLPLNTPE 216 (225)
Q Consensus 178 --~p~g~~~~~~t~~~~~-~-~~Lyv~~~-------~~~~i~~~~~~~~~ 216 (225)
.|... ...+.++.. + ++|||-.= ..+.+.+|++.+..
T Consensus 532 g~~p~~r--~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 532 DEFFQNS--LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SGGGGSC--CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCCcc--cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 22221 122323323 3 78888642 23668888877654
No 347
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=55.06 E-value=38 Score=28.70 Aligned_cols=83 Identities=11% Similarity=0.075 Sum_probs=49.7
Q ss_pred CCCcEEEEEeCCCCeEEEEecCccccceeEEecCCCEEEEEeCCCCEEEEEEecCCCCCceeEEe-----c-c--CCCCC
Q 047259 35 KPHGQLLKYDPELEETTVLHEGFYFANGVALSKDENFVVVCESWKFRCRRYWLKGPRQGRLESFI-----E-H--LPGGP 106 (225)
Q Consensus 35 ~~~g~v~~~d~~~~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~~~~~~I~~~~~~~~~~~~~~~~~-----~-~--~~g~P 106 (225)
...|.|+.+|.+++..+.+. .....++|+|+| +++ -..++.|..|++++.....+..+. . + ....+
T Consensus 143 ~~dG~L~v~dl~~~~~~~~~---~~Vs~v~WSpkG--~~v-g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V 216 (388)
T 1xip_A 143 NSVNDLSALDLRTKSTKQLA---QNVTSFDVTNSQ--LAV-LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSP 216 (388)
T ss_dssp ETTSEEEEEETTTCCEEEEE---ESEEEEEECSSE--EEE-EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEE
T ss_pred ECCCCEEEEEccCCcccccc---CCceEEEEcCCc--eEE-EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeE
Confidence 45788888888766554432 356789999998 333 335678888888753111022221 1 0 12235
Q ss_pred CceEECCCCCEEEEeec
Q 047259 107 DNINLAPDGSFWVALIK 123 (225)
Q Consensus 107 d~i~~d~~G~l~v~~~~ 123 (225)
..+.+-+++.+.++-..
T Consensus 217 ~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 217 LSVTILSPQDFLAVFGN 233 (388)
T ss_dssp EEEEESSSSEEEEEEEC
T ss_pred EEEEEecCCeEEEEEcC
Confidence 67788887776665444
No 348
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=51.75 E-value=1.4e+02 Score=27.21 Aligned_cols=57 Identities=21% Similarity=0.327 Sum_probs=38.2
Q ss_pred CcEEEcCC--CcEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEEEEecCc-------cccceeEEec-CCCEE
Q 047259 3 NDVIEASD--GSLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETTVLHEGF-------YFANGVALSK-DENFV 72 (225)
Q Consensus 3 ndv~~~~d--G~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-------~~pnGi~~~~-dg~~L 72 (225)
.+|++++. +.+|+.-. .|.||+.+.....++.+.... ..-..|+++| +.+.|
T Consensus 26 ~~i~~~p~~~~~~~~~~~------------------~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v 87 (737)
T 2cn3_A 26 PGIVFNETEKDLIYARAA------------------IGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRV 87 (737)
T ss_dssp CEEEECSSSTTCEEEECS------------------SSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCE
T ss_pred eEEEECCCCCCEEEEEec------------------CCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEE
Confidence 46788775 57887643 256899886656788765432 2246889998 44579
Q ss_pred EEEeC
Q 047259 73 VVCES 77 (225)
Q Consensus 73 yv~~~ 77 (225)
|++..
T Consensus 88 ~v~~~ 92 (737)
T 2cn3_A 88 YIVAG 92 (737)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98863
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=50.47 E-value=96 Score=24.86 Aligned_cols=82 Identities=15% Similarity=0.074 Sum_probs=43.7
Q ss_pred CcEEEEEeCCCCeEEEEecCc--ccc-ceeEEecCCCEEEEEeC------CCCEEEEEEecCCCCCceeEEeccCCCCCC
Q 047259 37 HGQLLKYDPELEETTVLHEGF--YFA-NGVALSKDENFVVVCES------WKFRCRRYWLKGPRQGRLESFIEHLPGGPD 107 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~~~~--~~p-nGi~~~~dg~~Lyv~~~------~~~~I~~~~~~~~~~~~~~~~~~~~~g~Pd 107 (225)
...+++||+.+.+++.+..-. ... .+++.. + +.|||.-- ..+.++.|+++.. ....+.... .+ .|.
T Consensus 167 ~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~v~~~d~d~~-~~~W~~~~~-~~-~~~ 241 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-G-DKTWLINGEAKPGLRTDAVFELDFTGN-NLKWNKLAP-VS-SPD 241 (357)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-T-TEEEEECCEEETTEECCCEEEEECC----CEEEECCC-SS-TTT
T ss_pred cccEEEEeCCCCcEEECCCCCCCCcccccEEEE-C-CEEEEEeeecCCCcccCceEEEEecCC-CCcEEecCC-CC-CCc
Confidence 468999999989998875321 111 344444 3 35887632 2457888876321 123332221 21 121
Q ss_pred ---c-eEECCCCCEEEEeec
Q 047259 108 ---N-INLAPDGSFWVALIK 123 (225)
Q Consensus 108 ---~-i~~d~~G~l~v~~~~ 123 (225)
+ .++--+|.||+....
T Consensus 242 ~~~~~~~~~~~~~iyv~GG~ 261 (357)
T 2uvk_A 242 GVAGGFAGISNDSLIFAGGA 261 (357)
T ss_dssp CCBSCEEEEETTEEEEECCE
T ss_pred ccccceEEEECCEEEEEcCc
Confidence 2 133346789997654
No 350
>2lc4_A PILP protein; type IV pilus, structural protein; NMR {Pseudomonas aeruginosa}
Probab=48.02 E-value=28 Score=24.10 Aligned_cols=56 Identities=13% Similarity=0.130 Sum_probs=36.7
Q ss_pred CCCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCCc
Q 047259 105 GPDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNATY 183 (225)
Q Consensus 105 ~Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~~ 183 (225)
.+-++.. ++|.+|.+..+.. +. .. +|+|.+++++. .+.+.+.+..|.-
T Consensus 42 ~~~ALV~-~dG~vyrVk~G~y------lG----------------------~n--~GrI~~It~~~I~l~E~v~Dg~G~W 90 (111)
T 2lc4_A 42 GTFALVK-GAGGVHRVRVGDY------LG----------------------RN--DGKVVGISEGKIDVIEIVPDGEGNW 90 (111)
T ss_dssp EEEEEEE-ETTEEEEEETTCE------ET----------------------TT--TEEEEEECSSEEEEEEEEECSSSCE
T ss_pred eEEEEEE-eCCcEEEEccCCE------ec----------------------cC--CCEEEEEeCCeEEEEEEEECCCCCE
Confidence 3556666 7899999887732 11 11 79999999987 4567778766653
Q ss_pred ccceeEEE
Q 047259 184 ISFVTSAV 191 (225)
Q Consensus 184 ~~~~t~~~ 191 (225)
...++.+.
T Consensus 91 ~eR~~~L~ 98 (111)
T 2lc4_A 91 LERPRSLT 98 (111)
T ss_dssp EEEEEEEE
T ss_pred EEeeeEEE
Confidence 33444443
No 351
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=37.99 E-value=70 Score=28.74 Aligned_cols=52 Identities=19% Similarity=0.139 Sum_probs=35.0
Q ss_pred CcEEEEEeCCCCeEEEEe--cC-cccccee----EEecCC----CEEEEEeCCCCEEEEEEecC
Q 047259 37 HGQLLKYDPELEETTVLH--EG-FYFANGV----ALSKDE----NFVVVCESWKFRCRRYWLKG 89 (225)
Q Consensus 37 ~g~v~~~d~~~~~~~~~~--~~-~~~pnGi----~~~~dg----~~Lyv~~~~~~~I~~~~~~~ 89 (225)
...||.+|.++|++...+ .+ ...++|+ .++.|+ +.+|+.|.. +.||||++.+
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~-GnlWRfDl~~ 284 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQ-GNLWRFDLIA 284 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETT-SEEEEEECSC
T ss_pred ccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCC-CcEEEEEcCC
Confidence 568999999888754432 11 2335554 344443 479999975 7999999975
No 352
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=35.50 E-value=2.6e+02 Score=25.57 Aligned_cols=50 Identities=18% Similarity=0.171 Sum_probs=30.3
Q ss_pred ceEEEEECCC---CcEEEEEECCCCCcccceeEEEEeCCEEEEee----------CCCCeEEEEeCCCc
Q 047259 160 GARIVKVDTH---GKIIMDFNDPNATYISFVTSAVEFEDNLYMAS----------IQSKFVGKLPLNTP 215 (225)
Q Consensus 160 ~~~V~~~d~~---G~~~~~~~~p~g~~~~~~t~~~~~~~~Lyv~~----------~~~~~i~~~~~~~~ 215 (225)
...+..++.+ |++. .+..|... ..+...+++||+.. ....+|.++++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~-~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 330 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQ-KINMPSDA-----TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDL 330 (711)
T ss_dssp CEEEEEEECSSSSCEEE-ECCSCTTC-----EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGG
T ss_pred ceeEEEEcCCCCCCcce-EeecCCcc-----eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcc
Confidence 4566666655 6543 34445432 11234588999832 35788999998764
No 353
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=34.87 E-value=2.1e+02 Score=25.67 Aligned_cols=57 Identities=18% Similarity=0.153 Sum_probs=38.4
Q ss_pred ceEEEEECCC-CcEEEEEECCCCC-cccceeEEEE-e-C-----CEEEEeeCCCCeEEEEeCCCccc
Q 047259 160 GARIVKVDTH-GKIIMDFNDPNAT-YISFVTSAVE-F-E-----DNLYMASIQSKFVGKLPLNTPEA 217 (225)
Q Consensus 160 ~~~V~~~d~~-G~~~~~~~~p~g~-~~~~~t~~~~-~-~-----~~Lyv~~~~~~~i~~~~~~~~~~ 217 (225)
...++.+|.+ |+++..+..+... .....+..+. + + +.+|.++.. +.|+||++.....
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~-GnlWRfDl~~~~~ 287 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQ-GNLWRFDLIAGKV 287 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETT-SEEEEEECSCSSC
T ss_pred ccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCC-CcEEEEEcCCCCc
Confidence 6788999976 8988887654221 1222333322 1 1 689999975 8999999988764
No 354
>1s1d_A Apyrase; adpase, five-blade beta propeller, calcium-binding protein, nucleotide-binding motif, hydrolase; HET: GP2; 1.60A {Homo sapiens} SCOP: b.67.3.1 PDB: 1s18_A* 2h2n_A 2h2u_A
Probab=32.40 E-value=1.1e+02 Score=25.42 Aligned_cols=44 Identities=9% Similarity=0.108 Sum_probs=25.6
Q ss_pred ceEEEEECCCCcEEEEEEC--CCCCc---ccceeEEEEeCCEEEEeeCCCC
Q 047259 160 GARIVKVDTHGKIIMDFND--PNATY---ISFVTSAVEFEDNLYMASIQSK 205 (225)
Q Consensus 160 ~~~V~~~d~~G~~~~~~~~--p~g~~---~~~~t~~~~~~~~Lyv~~~~~~ 205 (225)
.|.|.++. +++++..+-. .+|.. +. .==++..++.|||++.+..
T Consensus 114 TGiVyei~-~~~~iPwvIL~dGdG~~~kGfK-~EWaTVKd~~LyVGs~GKE 162 (331)
T 1s1d_A 114 TGVVYQIE-GSKAVPWVILSDGDGTVEKGFK-AEWLAVKDERLYVGGLGKE 162 (331)
T ss_dssp TCEEEEEE-TTEEEEEEECEETTTTEEEECC-CCEEEEETTEEEEECCCSC
T ss_pred CceEEEEe-CCcEEEEEEEecCCCCcCcccc-eeeEEEECCEEEEeecCce
Confidence 56777774 5666555443 33431 11 0013567999999998764
No 355
>2y4x_A PILP protein; biosynthetic protein; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 2y4y_A
Probab=27.32 E-value=1.1e+02 Score=20.30 Aligned_cols=46 Identities=11% Similarity=0.089 Sum_probs=31.8
Q ss_pred CCceEECCCCCEEEEeecCCchhhhhhhcChhHHHHHHhhhhhhhhhccCCCCcceEEEEECCCC-cEEEEEECCCCC
Q 047259 106 PDNINLAPDGSFWVALIKMNQTGVRAIQSCPDKWKLLQAYPELINLLIPLGNDAGARIVKVDTHG-KIIMDFNDPNAT 182 (225)
Q Consensus 106 Pd~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~V~~~d~~G-~~~~~~~~p~g~ 182 (225)
+-++.. ++|.+|.+..+.. +. .. +|+|.+++++. .+.+.+.+..|.
T Consensus 36 ~~ALV~-~dg~v~~V~~G~y------iG----------------------~n--~G~I~~I~~~~I~l~E~v~Dg~G~ 82 (93)
T 2y4x_A 36 TFALVK-GAGGVHRVRVGDY------LG----------------------RN--DGKVVGISEGKIDVIEIVPDGEGN 82 (93)
T ss_dssp EEEEEE-ETTEEEEECTTCE------ET----------------------TT--TEEEEEEETTEEEEEEEEECSSSC
T ss_pred EEEEEE-eCCCEEEEccCCE------ec----------------------cC--CCEEEEEeCCeEEEEEEEECCCCC
Confidence 556666 7889998887732 11 11 89999999987 456667776554
No 356
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=23.52 E-value=3.2e+02 Score=22.76 Aligned_cols=51 Identities=16% Similarity=0.140 Sum_probs=33.4
Q ss_pred EEEEEeCCCCeEEEEec-Cccccce-------eEEecCCCEEEEEeCCCCEEEEEEecCC
Q 047259 39 QLLKYDPELEETTVLHE-GFYFANG-------VALSKDENFVVVCESWKFRCRRYWLKGP 90 (225)
Q Consensus 39 ~v~~~d~~~~~~~~~~~-~~~~pnG-------i~~~~dg~~Lyv~~~~~~~I~~~~~~~~ 90 (225)
.|..+|.+++++..-.. .-.+||| +-+. +.+.+|+++....+|++++.+|.
T Consensus 53 ~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~-~~DsI~i~~~~~~~i~l~n~~G~ 111 (369)
T 3s9j_A 53 DIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSP-DSQYILVAQNNISRLSSINSQGE 111 (369)
T ss_dssp EEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESS-STTSEEEEEGGGTEEEEECTTCC
T ss_pred cEEEEECCCCceeeeeccccCCCCCcccceeeEEec-CCCEEEEEeCCcceEEEECCCce
Confidence 88899988777653221 1124444 3232 33459999988889999988763
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=23.18 E-value=4.3e+02 Score=24.10 Aligned_cols=83 Identities=11% Similarity=-0.042 Sum_probs=44.1
Q ss_pred CcEEEEEeCCC--CeEEEEecCccccceeEEecCCCEEEEEe----------CCCCEEEEEEecCCCC-----CceeE-E
Q 047259 37 HGQLLKYDPEL--EETTVLHEGFYFANGVALSKDENFVVVCE----------SWKFRCRRYWLKGPRQ-----GRLES-F 98 (225)
Q Consensus 37 ~g~v~~~d~~~--~~~~~~~~~~~~pnGi~~~~dg~~Lyv~~----------~~~~~I~~~~~~~~~~-----~~~~~-~ 98 (225)
+..+|.++.+. +++..+. ...-.++....++ .||+.. ..+++|+++++++... ...+. +
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKIN--MPSDATLQGSFKE-YVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF 344 (711)
T ss_dssp CEEEEEEECSSSSCEEEECC--SCTTCEEEEEETT-EEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE
T ss_pred ceeEEEEcCCCCCCcceEee--cCCcceEeeeECC-EEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE
Confidence 46777777542 5544432 1112334445555 477632 2467899999875311 23444 3
Q ss_pred eccCCCCCCceEECCCCCEEEEeec
Q 047259 99 IEHLPGGPDNINLAPDGSFWVALIK 123 (225)
Q Consensus 99 ~~~~~g~Pd~i~~d~~G~l~v~~~~ 123 (225)
.........++.+..+ .|+++...
T Consensus 345 ~~~~~~~l~~~~~~~~-~l~~~~~~ 368 (711)
T 4hvt_A 345 TPTANEVFNFISTTKD-RVFLATYD 368 (711)
T ss_dssp CCCTTEEEEEEEECSS-CEEEEEEE
T ss_pred CCCCCCeEEEEEEECC-EEEEEEEE
Confidence 3222224567777765 67666554
No 358
>2hw2_A Rifampin ADP-ribosyl transferase; protein-antibiotic complex, ADP-ribosylation; HET: RFP; 1.45A {Mycobacterium smegmatis}
Probab=22.91 E-value=34 Score=24.57 Aligned_cols=36 Identities=22% Similarity=0.445 Sum_probs=20.7
Q ss_pred cEEEEcCCCCCCcchhhhhcccCCCCcEEEEEeCCCCeEE
Q 047259 12 SLYFTVSSKKYTPAEYYKDLVEGKPHGQLLKYDPELEETT 51 (225)
Q Consensus 12 ~iy~td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 51 (225)
-||||-.- ....|..++..+.+.++||.+.+. |.++
T Consensus 47 hIYfTatl---d~A~wgAELA~Geg~~RIYiVEPt-G~fE 82 (143)
T 2hw2_A 47 HIYITQTL---DAAVWGAELAAGEGRGRIFIVEPE-GAIE 82 (143)
T ss_dssp CEEEESBH---HHHHHHHHHSCSSSCCEEEEEEES-SCCE
T ss_pred EEEEeccc---chhHHHHHHhcCCCCCeEEEEccC-CCcc
Confidence 36776442 223455556666777777777764 5443
No 359
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=22.72 E-value=3e+02 Score=22.60 Aligned_cols=14 Identities=21% Similarity=0.254 Sum_probs=10.3
Q ss_pred CcEEEEEeCCCCeE
Q 047259 37 HGQLLKYDPELEET 50 (225)
Q Consensus 37 ~g~v~~~d~~~~~~ 50 (225)
.|.|+.+|..+|+.
T Consensus 221 dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 221 DKSLLASDLDFRIA 234 (339)
T ss_dssp TTEEEEECSTTCCE
T ss_pred CCEEEEEECCCCcE
Confidence 67888888776663
Done!