Query 047260
Match_columns 784
No_of_seqs 1114 out of 2845
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 16:15:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047260.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047260hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 3.7E-42 1.3E-46 385.4 42.7 283 500-784 101-408 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 2.3E-41 7.9E-46 368.7 46.2 288 495-784 43-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 4.5E-41 1.6E-45 364.2 41.9 284 499-784 24-318 (321)
4 2pbi_B Guanine nucleotide-bind 100.0 9.1E-40 3.1E-44 358.7 45.4 289 495-784 52-354 (354)
5 3iz6_a 40S ribosomal protein R 100.0 6.8E-41 2.3E-45 370.9 34.3 289 496-784 55-372 (380)
6 2ynn_A Coatomer subunit beta'; 100.0 1.4E-39 4.8E-44 348.9 41.7 282 498-781 4-297 (304)
7 1nr0_A Actin interacting prote 100.0 1.1E-39 3.9E-44 384.1 43.2 320 436-784 145-608 (611)
8 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.8E-39 1.3E-43 352.1 40.3 288 496-784 4-332 (345)
9 4ery_A WD repeat-containing pr 100.0 1.8E-38 6.2E-43 339.9 44.0 287 496-784 12-309 (312)
10 3frx_A Guanine nucleotide-bind 100.0 1.6E-38 5.6E-43 343.2 43.1 285 496-784 6-314 (319)
11 1erj_A Transcriptional repress 100.0 2.9E-38 1E-42 351.3 43.1 278 504-784 61-386 (393)
12 2xzm_R RACK1; ribosome, transl 100.0 6.1E-38 2.1E-42 341.8 42.6 285 495-784 9-337 (343)
13 2ymu_A WD-40 repeat protein; u 100.0 1.1E-37 3.6E-42 361.8 46.8 281 498-784 294-577 (577)
14 4g56_B MGC81050 protein; prote 100.0 1.4E-38 4.7E-43 349.9 35.7 279 504-784 39-340 (357)
15 4gqb_B Methylosome protein 50; 100.0 2.5E-38 8.6E-43 346.6 36.7 277 505-784 28-328 (344)
16 2hes_X YDR267CP; beta-propelle 100.0 8.8E-38 3E-42 339.1 39.8 284 497-784 4-325 (330)
17 1nr0_A Actin interacting prote 100.0 2.6E-37 8.8E-42 364.1 47.0 314 439-784 19-394 (611)
18 3zwl_B Eukaryotic translation 100.0 1.5E-36 5.1E-41 329.0 46.5 285 496-784 21-343 (369)
19 2pm9_A Protein WEB1, protein t 100.0 1.7E-38 5.7E-43 352.0 30.8 319 442-784 16-411 (416)
20 1vyh_C Platelet-activating fac 100.0 1.5E-37 5.3E-42 347.9 38.8 280 437-745 107-410 (410)
21 3ow8_A WD repeat-containing pr 100.0 6.1E-37 2.1E-41 331.8 41.5 290 430-745 24-320 (321)
22 1r5m_A SIR4-interacting protei 100.0 3.2E-37 1.1E-41 340.9 39.7 328 440-784 47-422 (425)
23 4aow_A Guanine nucleotide-bind 100.0 2.5E-36 8.7E-41 324.7 44.9 284 497-784 28-334 (340)
24 1gxr_A ESG1, transducin-like e 100.0 8.9E-36 3.1E-40 319.1 46.3 278 503-784 47-334 (337)
25 2ymu_A WD-40 repeat protein; u 100.0 6.3E-36 2.1E-40 347.0 47.5 281 498-784 253-536 (577)
26 1sq9_A Antiviral protein SKI8; 100.0 8.9E-37 3E-41 336.3 37.0 284 498-784 7-392 (397)
27 3frx_A Guanine nucleotide-bind 100.0 6.5E-36 2.2E-40 322.9 42.1 291 433-747 12-318 (319)
28 2ynn_A Coatomer subunit beta'; 100.0 3.2E-36 1.1E-40 322.8 36.5 281 438-746 13-302 (304)
29 3dm0_A Maltose-binding peripla 100.0 7.4E-36 2.5E-40 356.5 42.8 283 498-784 373-690 (694)
30 4gqb_B Methylosome protein 50; 100.0 3E-36 1E-40 330.1 36.1 289 441-749 33-334 (344)
31 1k8k_C P40, ARP2/3 complex 41 100.0 4.2E-36 1.5E-40 327.1 36.6 280 503-784 4-358 (372)
32 3vl1_A 26S proteasome regulato 100.0 1.1E-35 3.6E-40 330.6 38.6 312 442-784 60-416 (420)
33 1got_B GT-beta; complex (GTP-b 100.0 2.7E-35 9.1E-40 320.7 40.5 278 436-743 53-340 (340)
34 3odt_A Protein DOA1; ubiquitin 100.0 6.3E-35 2.2E-39 309.6 41.3 280 496-784 7-293 (313)
35 3k26_A Polycomb protein EED; W 100.0 4.6E-36 1.6E-40 325.2 31.3 287 495-784 5-363 (366)
36 3ei3_B DNA damage-binding prot 100.0 3.7E-35 1.3E-39 323.1 36.7 282 496-784 62-379 (383)
37 4g56_B MGC81050 protein; prote 100.0 1.3E-35 4.4E-40 326.2 32.7 285 437-747 41-344 (357)
38 3i2n_A WD repeat-containing pr 100.0 1.5E-35 5.1E-40 320.5 32.6 282 501-784 12-350 (357)
39 2xzm_R RACK1; ribosome, transl 100.0 1E-34 3.5E-39 316.3 38.1 292 436-747 19-341 (343)
40 1r5m_A SIR4-interacting protei 100.0 1E-34 3.4E-39 320.9 38.3 277 503-784 41-358 (425)
41 4aow_A Guanine nucleotide-bind 100.0 7.5E-34 2.6E-38 305.4 43.8 293 434-748 34-339 (340)
42 2pbi_B Guanine nucleotide-bind 100.0 2.2E-34 7.4E-39 315.9 39.7 280 436-743 62-354 (354)
43 1pgu_A Actin interacting prote 100.0 5.4E-34 1.8E-38 331.9 44.1 339 436-784 61-611 (615)
44 4ery_A WD repeat-containing pr 100.0 4.5E-34 1.5E-38 305.7 39.8 283 434-745 19-311 (312)
45 3dwl_C Actin-related protein 2 100.0 4.4E-36 1.5E-40 329.1 23.7 279 503-784 7-376 (377)
46 2pm9_A Protein WEB1, protein t 100.0 1.1E-35 3.7E-40 329.4 26.5 276 508-784 13-334 (416)
47 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-34 1.8E-38 311.3 38.1 286 440-750 18-339 (345)
48 3gre_A Serine/threonine-protei 100.0 7.9E-35 2.7E-39 326.4 31.2 283 498-784 53-437 (437)
49 3iz6_a 40S ribosomal protein R 100.0 1.2E-34 4E-39 320.8 32.1 286 435-748 63-377 (380)
50 3v7d_B Cell division control p 100.0 2.4E-33 8.1E-38 316.9 42.4 280 498-784 112-418 (464)
51 1gxr_A ESG1, transducin-like e 100.0 5E-34 1.7E-38 305.5 34.3 276 506-784 8-293 (337)
52 3dw8_B Serine/threonine-protei 100.0 3E-34 1E-38 321.3 33.7 275 506-783 27-442 (447)
53 1pgu_A Actin interacting prote 100.0 2.8E-33 9.6E-38 325.9 42.6 314 438-784 18-363 (615)
54 2hes_X YDR267CP; beta-propelle 100.0 1.8E-33 6.1E-38 305.2 38.1 282 436-746 12-328 (330)
55 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.9E-33 2E-37 312.7 43.7 294 451-784 129-439 (445)
56 3dm0_A Maltose-binding peripla 100.0 1.8E-33 6.1E-38 335.9 41.6 288 436-745 380-692 (694)
57 2j04_B YDR362CP, TAU91; beta p 100.0 3.2E-35 1.1E-39 339.8 25.3 307 453-784 175-514 (524)
58 1erj_A Transcriptional repress 100.0 3.2E-33 1.1E-37 310.7 40.0 299 437-747 63-390 (393)
59 3v7d_B Cell division control p 100.0 1.4E-32 4.8E-37 310.5 45.4 297 452-783 133-459 (464)
60 3sfz_A APAF-1, apoptotic pepti 100.0 9.2E-34 3.1E-38 359.2 39.6 320 436-784 613-1031(1249)
61 4e54_B DNA damage-binding prot 100.0 1.4E-34 4.8E-39 325.9 28.2 282 500-784 112-427 (435)
62 4gga_A P55CDC, cell division c 100.0 6.6E-33 2.2E-37 310.6 41.2 269 509-784 107-392 (420)
63 4aez_A CDC20, WD repeat-contai 100.0 3.3E-33 1.1E-37 310.9 37.7 278 500-784 84-377 (401)
64 2oaj_A Protein SNI1; WD40 repe 100.0 2.5E-33 8.4E-38 344.4 39.5 200 438-668 17-247 (902)
65 3mkq_A Coatomer beta'-subunit; 100.0 2.6E-33 8.8E-38 338.6 39.1 318 439-784 14-383 (814)
66 1yfq_A Cell cycle arrest prote 100.0 1.2E-33 4.1E-38 304.5 31.8 272 500-779 4-315 (342)
67 3mmy_A MRNA export factor; mRN 100.0 1.9E-33 6.5E-38 304.4 33.5 285 496-783 28-342 (368)
68 3mkq_A Coatomer beta'-subunit; 100.0 2.8E-33 9.7E-38 338.2 38.2 284 498-784 4-299 (814)
69 2pm7_B Protein transport prote 100.0 5E-33 1.7E-37 296.9 35.3 246 501-746 3-285 (297)
70 3vl1_A 26S proteasome regulato 100.0 7.6E-34 2.6E-38 315.7 28.9 272 509-784 58-362 (420)
71 4a11_B DNA excision repair pro 100.0 1.2E-32 4E-37 303.0 37.9 283 500-784 36-362 (408)
72 3sfz_A APAF-1, apoptotic pepti 100.0 7.4E-33 2.5E-37 350.8 41.5 283 501-784 609-910 (1249)
73 4ggc_A P55CDC, cell division c 100.0 4.3E-32 1.5E-36 288.8 40.4 268 510-784 28-312 (318)
74 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-33 8E-38 299.8 30.2 282 502-784 6-334 (351)
75 1sq9_A Antiviral protein SKI8; 100.0 8.3E-33 2.9E-37 304.5 34.9 288 435-748 13-397 (397)
76 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-32 4.1E-37 309.7 36.5 270 499-784 125-411 (435)
77 2oaj_A Protein SNI1; WD40 repe 100.0 9.3E-33 3.2E-37 339.3 38.0 313 439-784 59-658 (902)
78 4h5i_A Guanine nucleotide-exch 100.0 3.3E-33 1.1E-37 308.0 30.0 275 507-784 14-340 (365)
79 3zwl_B Eukaryotic translation 100.0 1.4E-31 4.6E-36 289.9 41.6 282 437-748 31-348 (369)
80 3i2n_A WD repeat-containing pr 100.0 8.5E-33 2.9E-37 298.8 31.6 287 437-749 17-356 (357)
81 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.2E-31 7.7E-36 299.8 42.1 270 499-784 110-388 (445)
82 2pm7_B Protein transport prote 100.0 4.6E-32 1.6E-36 289.4 33.9 242 543-784 3-282 (297)
83 3odt_A Protein DOA1; ubiquitin 100.0 1.8E-31 6.1E-36 283.0 38.0 282 435-751 15-301 (313)
84 3k26_A Polycomb protein EED; W 100.0 1.9E-32 6.6E-37 296.7 30.2 283 436-745 16-365 (366)
85 3bg1_A Protein SEC13 homolog; 100.0 7.8E-33 2.7E-37 298.3 26.9 244 502-745 8-292 (316)
86 4aez_A CDC20, WD repeat-contai 100.0 3.9E-31 1.3E-35 294.1 40.9 269 451-750 104-384 (401)
87 4gga_A P55CDC, cell division c 100.0 2.8E-31 9.5E-36 297.3 39.6 271 451-750 116-399 (420)
88 3ei3_B DNA damage-binding prot 100.0 1.2E-31 4.2E-36 295.0 33.6 282 435-746 70-382 (383)
89 1k8k_C P40, ARP2/3 complex 41 100.0 2.3E-31 7.8E-36 289.7 35.2 282 441-748 11-363 (372)
90 4a11_B DNA excision repair pro 100.0 5.6E-31 1.9E-35 289.6 37.2 327 436-784 41-402 (408)
91 3jrp_A Fusion protein of prote 100.0 1.3E-31 4.5E-36 291.6 31.3 249 499-784 3-284 (379)
92 2aq5_A Coronin-1A; WD40 repeat 100.0 1E-31 3.6E-36 298.4 31.0 275 508-784 35-339 (402)
93 4e54_B DNA damage-binding prot 100.0 4.3E-32 1.5E-36 305.5 27.4 284 439-749 120-433 (435)
94 3dwl_C Actin-related protein 2 100.0 8E-32 2.7E-36 295.2 26.7 278 441-744 14-377 (377)
95 3bg1_A Protein SEC13 homolog; 100.0 7.5E-32 2.6E-36 290.6 23.8 241 544-784 8-290 (316)
96 4ggc_A P55CDC, cell division c 100.0 9.9E-30 3.4E-34 270.5 38.4 268 452-748 37-317 (318)
97 3bws_A Protein LP49; two-domai 100.0 1.3E-29 4.5E-34 283.0 40.5 283 498-784 114-429 (433)
98 3vu4_A KMHSV2; beta-propeller 100.0 3.2E-30 1.1E-34 282.8 32.2 274 500-784 12-333 (355)
99 1p22_A F-BOX/WD-repeat protein 100.0 8.4E-30 2.9E-34 286.5 34.7 276 451-765 143-433 (435)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.7E-29 9.3E-34 283.8 36.7 270 508-783 5-387 (450)
101 3dw8_B Serine/threonine-protei 100.0 7.9E-30 2.7E-34 285.4 31.1 288 439-745 29-445 (447)
102 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-30 4.4E-35 283.7 23.4 261 514-783 43-329 (343)
103 2xyi_A Probable histone-bindin 100.0 1.2E-29 4.3E-34 285.2 31.6 242 543-784 122-407 (430)
104 3gre_A Serine/threonine-protei 100.0 1E-30 3.5E-35 292.8 22.6 261 515-784 35-356 (437)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 4.5E-30 1.6E-34 285.1 27.5 277 448-750 44-346 (402)
106 1yfq_A Cell cycle arrest prote 100.0 3.9E-29 1.4E-33 269.0 33.7 275 436-743 9-321 (342)
107 2j04_B YDR362CP, TAU91; beta p 100.0 6E-31 2.1E-35 304.0 20.7 253 517-771 171-458 (524)
108 4h5i_A Guanine nucleotide-exch 100.0 2E-29 7E-34 277.7 28.3 284 441-747 17-344 (365)
109 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-29 4E-34 289.2 26.3 259 505-784 13-294 (588)
110 3mmy_A MRNA export factor; mRN 100.0 1.2E-28 4E-33 266.7 32.7 287 434-750 35-353 (368)
111 2xyi_A Probable histone-bindin 100.0 7.4E-29 2.5E-33 278.9 31.6 248 500-747 121-411 (430)
112 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-28 4.1E-33 263.2 31.4 292 436-750 9-341 (351)
113 1l0q_A Surface layer protein; 100.0 1.4E-27 4.9E-32 262.7 39.6 273 452-756 3-286 (391)
114 3jro_A Fusion protein of prote 100.0 2.4E-29 8.3E-34 303.4 26.0 247 501-784 3-282 (753)
115 1l0q_A Surface layer protein; 100.0 1.3E-27 4.4E-32 263.1 37.2 260 520-784 3-272 (391)
116 4gq1_A NUP37; propeller, trans 100.0 4E-29 1.4E-33 277.9 22.3 262 504-780 86-383 (393)
117 2j04_A TAU60, YPL007P, hypothe 100.0 1E-28 3.5E-33 281.5 23.0 243 505-776 83-350 (588)
118 3jrp_A Fusion protein of prote 100.0 5.2E-27 1.8E-31 255.2 31.1 244 438-706 11-289 (379)
119 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.4E-26 1.2E-30 258.3 36.2 241 503-746 98-391 (450)
120 3bws_A Protein LP49; two-domai 100.0 1.3E-25 4.3E-30 250.7 37.9 278 443-746 127-432 (433)
121 1nir_A Nitrite reductase; hemo 99.9 1.6E-25 5.5E-30 259.9 36.7 303 452-784 150-511 (543)
122 2w18_A PALB2, fancn, partner a 99.9 1.8E-25 6.3E-30 240.5 34.2 285 493-784 21-354 (356)
123 3vu4_A KMHSV2; beta-propeller 99.9 3.4E-26 1.2E-30 250.7 27.3 240 533-784 3-268 (355)
124 3lrv_A PRE-mRNA-splicing facto 99.9 3.4E-26 1.2E-30 248.7 23.8 260 450-746 47-333 (343)
125 3jro_A Fusion protein of prote 99.9 2.9E-26 9.8E-31 276.6 22.5 246 436-706 7-287 (753)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1E-24 3.5E-29 244.5 31.5 263 501-769 111-410 (415)
127 4gq1_A NUP37; propeller, trans 99.9 3.5E-26 1.2E-30 254.2 18.7 256 448-744 98-387 (393)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.3E-24 8E-29 241.6 26.2 271 508-784 63-384 (415)
129 2w18_A PALB2, fancn, partner a 99.9 1.8E-23 6E-28 225.1 28.7 184 559-744 143-355 (356)
130 3vgz_A Uncharacterized protein 99.9 2.9E-22 9.8E-27 216.3 37.9 268 506-777 39-334 (353)
131 1nir_A Nitrite reductase; hemo 99.9 4.9E-23 1.7E-27 239.0 31.5 266 514-784 144-455 (543)
132 2ecf_A Dipeptidyl peptidase IV 99.9 5E-23 1.7E-27 246.6 30.6 274 507-784 36-410 (741)
133 3u4y_A Uncharacterized protein 99.9 3.3E-22 1.1E-26 214.6 33.5 268 514-784 4-301 (331)
134 3u4y_A Uncharacterized protein 99.9 5.4E-22 1.8E-26 212.9 34.6 292 446-767 5-325 (331)
135 2ecf_A Dipeptidyl peptidase IV 99.9 1.8E-22 6.2E-27 241.7 32.6 270 508-783 109-455 (741)
136 1ri6_A Putative isomerase YBHE 99.9 2.9E-22 9.9E-27 214.8 29.6 262 521-784 7-305 (343)
137 2ojh_A Uncharacterized protein 99.9 2.4E-22 8.2E-27 209.6 26.1 251 525-778 18-293 (297)
138 1ri6_A Putative isomerase YBHE 99.9 2.1E-21 7.2E-26 208.0 32.6 290 453-769 7-335 (343)
139 1pby_B Quinohemoprotein amine 99.9 1.2E-21 4E-26 209.5 28.7 260 520-784 2-307 (337)
140 1xfd_A DIP, dipeptidyl aminope 99.9 1.7E-22 5.8E-27 241.1 24.3 273 509-784 18-390 (723)
141 2ojh_A Uncharacterized protein 99.9 7.9E-22 2.7E-26 205.6 26.0 232 502-737 36-293 (297)
142 3o4h_A Acylamino-acid-releasin 99.9 8.2E-22 2.8E-26 229.9 27.3 267 507-784 21-312 (582)
143 1k32_A Tricorn protease; prote 99.9 2.8E-21 9.4E-26 241.3 32.8 276 500-784 92-458 (1045)
144 1k32_A Tricorn protease; prote 99.9 2.5E-21 8.6E-26 241.6 32.3 277 499-784 195-499 (1045)
145 1xfd_A DIP, dipeptidyl aminope 99.9 3.8E-21 1.3E-25 229.4 29.9 304 442-775 20-428 (723)
146 2z3z_A Dipeptidyl aminopeptida 99.9 5.5E-21 1.9E-25 227.7 31.0 273 506-784 80-432 (706)
147 1pby_B Quinohemoprotein amine 99.9 1E-20 3.5E-25 202.2 26.0 266 452-750 2-314 (337)
148 2z3z_A Dipeptidyl aminopeptida 99.9 4.8E-20 1.6E-24 219.6 28.7 243 503-748 116-437 (706)
149 3scy_A Hypothetical bacterial 99.9 1.3E-18 4.5E-23 189.5 37.0 257 506-765 48-360 (361)
150 3pe7_A Oligogalacturonate lyas 99.9 5.8E-20 2E-24 201.6 26.3 283 499-783 22-378 (388)
151 3hfq_A Uncharacterized protein 99.9 3.4E-19 1.2E-23 193.0 31.5 254 528-783 15-313 (347)
152 3hfq_A Uncharacterized protein 99.9 7.6E-19 2.6E-23 190.2 34.1 244 505-750 37-323 (347)
153 1jmx_B Amine dehydrogenase; ox 99.9 1E-19 3.5E-24 195.7 26.5 268 512-784 4-322 (349)
154 3vgz_A Uncharacterized protein 99.8 1.2E-18 4E-23 187.9 32.5 234 548-784 39-300 (353)
155 3scy_A Hypothetical bacterial 99.8 1.4E-18 4.8E-23 189.4 31.9 263 519-783 13-333 (361)
156 2oit_A Nucleoporin 214KDA; NH2 99.8 3.3E-19 1.1E-23 201.1 27.3 236 507-744 36-331 (434)
157 1z68_A Fibroblast activation p 99.8 3.5E-20 1.2E-24 221.4 18.8 266 512-784 20-388 (719)
158 1z68_A Fibroblast activation p 99.8 2.7E-19 9.3E-24 213.7 25.2 272 509-784 61-440 (719)
159 3c5m_A Oligogalacturonate lyas 99.8 1.7E-18 5.7E-23 189.8 21.6 270 509-783 37-378 (396)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.4E-17 4.9E-22 182.5 28.6 262 521-784 4-338 (365)
161 3o4h_A Acylamino-acid-releasin 99.8 3.3E-18 1.1E-22 199.3 23.8 229 549-784 21-273 (582)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 5.8E-17 2E-21 177.6 32.2 241 506-747 38-342 (365)
163 1jmx_B Amine dehydrogenase; ox 99.8 2.5E-17 8.5E-22 176.9 28.1 268 450-750 10-329 (349)
164 4a5s_A Dipeptidyl peptidase 4 99.8 1.3E-17 4.3E-22 200.6 26.4 262 508-776 17-382 (740)
165 2oit_A Nucleoporin 214KDA; NH2 99.8 1.3E-17 4.6E-22 187.9 23.5 210 529-747 23-279 (434)
166 3azo_A Aminopeptidase; POP fam 99.8 1.4E-16 4.8E-21 188.2 29.1 279 502-783 18-363 (662)
167 2oiz_A Aromatic amine dehydrog 99.8 3.3E-16 1.1E-20 172.0 29.9 260 502-769 46-360 (361)
168 4a5s_A Dipeptidyl peptidase 4 99.7 9.3E-16 3.2E-20 184.3 33.7 262 511-776 65-435 (740)
169 3fvz_A Peptidyl-glycine alpha- 99.7 1.6E-15 5.4E-20 163.9 30.7 238 507-746 23-322 (329)
170 2gop_A Trilobed protease; beta 99.7 1.3E-15 4.4E-20 164.3 29.2 253 508-783 15-327 (347)
171 2oiz_A Aromatic amine dehydrog 99.7 1.3E-15 4.4E-20 167.3 28.4 260 518-784 14-331 (361)
172 1qks_A Cytochrome CD1 nitrite 99.7 1.4E-14 4.8E-19 168.3 38.2 274 509-784 198-535 (567)
173 1q7f_A NHL, brain tumor CG1071 99.7 6.9E-15 2.4E-19 154.6 32.1 236 505-747 27-281 (286)
174 3pe7_A Oligogalacturonate lyas 99.7 7.6E-16 2.6E-20 168.6 24.7 273 444-743 41-379 (388)
175 2dg1_A DRP35, lactonase; beta 99.7 2.2E-15 7.4E-20 161.9 27.1 263 508-777 6-300 (333)
176 3fvz_A Peptidyl-glycine alpha- 99.7 3.9E-15 1.3E-19 160.8 29.1 233 549-784 23-319 (329)
177 1q7f_A NHL, brain tumor CG1071 99.7 1.6E-14 5.4E-19 151.8 32.7 232 547-784 27-277 (286)
178 2dg1_A DRP35, lactonase; beta 99.7 9.8E-14 3.3E-18 149.0 37.4 242 500-745 37-315 (333)
179 2z2n_A Virginiamycin B lyase; 99.7 2.8E-13 9.4E-18 142.0 40.0 271 503-781 10-290 (299)
180 3azo_A Aminopeptidase; POP fam 99.7 1.6E-15 5.5E-20 179.0 24.3 237 512-752 81-375 (662)
181 3c5m_A Oligogalacturonate lyas 99.7 3E-15 1E-19 163.8 23.5 233 512-750 85-388 (396)
182 2xdw_A Prolyl endopeptidase; a 99.7 1E-14 3.5E-19 174.4 28.2 241 506-748 123-416 (710)
183 3e5z_A Putative gluconolactona 99.7 4.4E-14 1.5E-18 149.4 30.1 241 501-750 21-290 (296)
184 2gop_A Trilobed protease; beta 99.6 2.4E-14 8.3E-19 154.3 25.5 232 508-758 59-342 (347)
185 3dsm_A Uncharacterized protein 99.6 1.9E-13 6.7E-18 147.6 31.7 249 527-784 15-299 (328)
186 3e5z_A Putative gluconolactona 99.6 1.6E-13 5.6E-18 145.1 29.9 233 541-782 19-282 (296)
187 2qc5_A Streptogramin B lactona 99.6 3.4E-12 1.2E-16 133.7 38.2 270 505-783 17-296 (300)
188 2bkl_A Prolyl endopeptidase; m 99.6 4.7E-14 1.6E-18 168.2 25.9 244 505-753 118-404 (695)
189 1qks_A Cytochrome CD1 nitrite 99.6 1.1E-12 3.8E-17 152.3 36.5 264 517-784 165-474 (567)
190 1rwi_B Serine/threonine-protei 99.6 1.9E-13 6.3E-18 141.8 26.8 237 509-748 25-266 (270)
191 3dsm_A Uncharacterized protein 99.6 6E-13 2.1E-17 143.8 28.7 250 509-765 45-320 (328)
192 3sjl_D Methylamine dehydrogena 99.6 4.2E-13 1.4E-17 147.5 27.6 269 514-784 39-360 (386)
193 1rwi_B Serine/threonine-protei 99.6 4.6E-13 1.6E-17 138.8 26.0 231 551-784 25-261 (270)
194 2xdw_A Prolyl endopeptidase; a 99.6 6E-13 2E-17 159.0 30.4 265 517-784 81-411 (710)
195 2mad_H Methylamine dehydrogena 99.6 6.6E-12 2.2E-16 138.5 36.2 265 515-784 28-347 (373)
196 3no2_A Uncharacterized protein 99.6 1.3E-12 4.3E-17 138.0 27.5 210 518-734 4-231 (276)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 6.3E-12 2.1E-16 133.1 31.9 239 504-747 14-300 (314)
198 2z2n_A Virginiamycin B lyase; 99.5 3E-11 1E-15 126.4 34.1 233 547-784 12-252 (299)
199 2bkl_A Prolyl endopeptidase; m 99.5 7.6E-13 2.6E-17 157.7 23.8 263 516-784 76-394 (695)
200 2mad_H Methylamine dehydrogena 99.5 4.4E-11 1.5E-15 131.9 35.6 233 512-752 70-356 (373)
201 3sjl_D Methylamine dehydrogena 99.5 5.9E-12 2E-16 138.4 28.4 261 499-767 71-384 (386)
202 1yr2_A Prolyl oligopeptidase; 99.5 1.5E-12 5.1E-17 156.4 23.1 242 506-752 161-447 (741)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.8E-11 6.3E-16 129.5 28.6 232 549-784 17-296 (314)
204 3no2_A Uncharacterized protein 99.4 1.8E-11 6E-16 129.2 25.9 208 560-775 4-231 (276)
205 3c75_H MADH, methylamine dehyd 99.4 1.4E-11 4.9E-16 137.5 25.8 265 517-784 82-399 (426)
206 1yr2_A Prolyl oligopeptidase; 99.4 1.3E-11 4.5E-16 148.2 25.7 264 516-784 115-438 (741)
207 3hrp_A Uncharacterized protein 99.4 1.5E-10 5.2E-15 129.1 31.9 230 508-744 131-408 (409)
208 2qc5_A Streptogramin B lactona 99.4 6.6E-10 2.3E-14 116.1 34.9 232 547-784 17-257 (300)
209 3g4e_A Regucalcin; six bladed 99.4 3.6E-10 1.2E-14 119.8 32.8 226 505-736 10-262 (297)
210 2qe8_A Uncharacterized protein 99.4 8.4E-12 2.9E-16 135.6 20.4 256 508-779 17-313 (343)
211 3iuj_A Prolyl endopeptidase; h 99.4 4.1E-11 1.4E-15 142.8 26.7 242 505-752 126-411 (693)
212 1xip_A Nucleoporin NUP159; bet 99.4 1E-11 3.6E-16 136.8 19.7 172 509-693 39-232 (388)
213 3hrp_A Uncharacterized protein 99.4 2.1E-10 7.1E-15 128.0 29.4 228 550-783 131-406 (409)
214 3g4e_A Regucalcin; six bladed 99.4 7.6E-10 2.6E-14 117.3 32.0 224 546-776 9-261 (297)
215 3c75_H MADH, methylamine dehyd 99.4 8.5E-11 2.9E-15 131.2 25.3 246 499-752 111-408 (426)
216 2ghs_A AGR_C_1268P; regucalcin 99.3 1.3E-09 4.4E-14 117.4 32.5 219 510-736 51-292 (326)
217 3dr2_A Exported gluconolactona 99.3 6.7E-10 2.3E-14 118.1 27.3 235 501-743 38-303 (305)
218 2ghs_A AGR_C_1268P; regucalcin 99.3 3.2E-09 1.1E-13 114.3 32.2 216 551-776 50-291 (326)
219 3q7m_A Lipoprotein YFGL, BAMB; 99.3 2.5E-09 8.5E-14 116.9 30.9 253 518-784 102-375 (376)
220 1mda_H Methylamine dehydrogena 99.3 5.7E-11 1.9E-15 130.4 17.0 253 498-766 57-366 (368)
221 3dr2_A Exported gluconolactona 99.3 1.1E-09 3.9E-14 116.3 26.2 230 543-782 38-302 (305)
222 3hxj_A Pyrrolo-quinoline quino 99.2 5.1E-10 1.7E-14 119.2 22.7 256 509-783 61-320 (330)
223 2hz6_A Endoplasmic reticulum t 99.2 1.8E-13 6.2E-18 150.7 -6.7 223 518-748 8-238 (369)
224 1yiq_A Quinohemoprotein alcoho 99.2 2E-09 6.8E-14 128.1 25.9 264 519-784 70-502 (689)
225 1mda_H Methylamine dehydrogena 99.2 4.6E-10 1.6E-14 123.1 18.2 244 530-784 47-343 (368)
226 1xip_A Nucleoporin NUP159; bet 99.2 4.3E-10 1.5E-14 123.9 17.9 169 594-775 39-232 (388)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.1 8.8E-09 3E-13 112.5 27.0 253 519-784 53-334 (376)
228 1yiq_A Quinohemoprotein alcoho 99.1 6.6E-09 2.2E-13 123.6 27.9 254 519-775 121-537 (689)
229 1kb0_A Quinohemoprotein alcoho 99.1 5.3E-09 1.8E-13 124.2 27.0 253 518-773 127-536 (677)
230 1kb0_A Quinohemoprotein alcoho 99.1 4E-09 1.4E-13 125.3 25.4 262 519-784 77-504 (677)
231 3iuj_A Prolyl endopeptidase; h 99.1 1.9E-09 6.5E-14 128.4 22.6 232 547-784 126-402 (693)
232 1npe_A Nidogen, entactin; glyc 99.1 1.3E-07 4.6E-12 98.1 31.7 244 520-769 2-263 (267)
233 3hxj_A Pyrrolo-quinoline quino 99.1 2.2E-09 7.7E-14 114.2 16.5 254 513-784 25-281 (330)
234 2ece_A 462AA long hypothetical 99.0 4.9E-07 1.7E-11 100.2 31.6 215 517-734 93-399 (462)
235 2ece_A 462AA long hypothetical 99.0 2.1E-07 7.1E-12 103.2 28.4 215 559-775 93-399 (462)
236 2qe8_A Uncharacterized protein 98.9 1.4E-08 4.8E-13 110.0 17.9 226 505-743 64-318 (343)
237 2hz6_A Endoplasmic reticulum t 98.9 4.1E-10 1.4E-14 123.7 5.0 199 560-769 8-216 (369)
238 1kv9_A Type II quinohemoprotei 98.9 1.4E-07 4.9E-12 111.7 26.9 262 519-784 66-485 (668)
239 1fwx_A Nitrous oxide reductase 98.9 3.8E-08 1.3E-12 112.7 20.7 252 522-776 18-407 (595)
240 2iwa_A Glutamine cyclotransfer 98.9 2.4E-07 8.2E-12 96.6 24.9 204 540-747 10-238 (266)
241 4a2l_A BT_4663, two-component 98.9 4.2E-06 1.4E-10 100.9 38.6 266 507-783 262-567 (795)
242 4a2l_A BT_4663, two-component 98.9 4.1E-06 1.4E-10 101.1 38.1 266 510-783 175-476 (795)
243 1npe_A Nidogen, entactin; glyc 98.9 2.6E-06 9E-11 88.2 31.2 216 509-728 37-263 (267)
244 2fp8_A Strictosidine synthase; 98.9 1.7E-06 5.8E-11 92.4 30.0 236 508-748 19-315 (322)
245 2ad6_A Methanol dehydrogenase 98.8 4.2E-07 1.4E-11 105.6 25.1 260 519-784 62-491 (571)
246 1fwx_A Nitrous oxide reductase 98.8 1.6E-07 5.5E-12 107.5 20.0 228 518-749 100-434 (595)
247 3v9f_A Two-component system se 98.8 1.1E-05 3.6E-10 97.2 36.7 270 507-784 257-565 (781)
248 3nol_A Glutamine cyclotransfer 98.8 1.1E-06 3.6E-11 90.9 23.8 191 541-736 33-245 (262)
249 2p4o_A Hypothetical protein; p 98.7 1.4E-05 4.7E-10 84.8 32.2 234 496-737 21-279 (306)
250 1w6s_A Methanol dehydrogenase 98.7 2.9E-06 9.8E-11 98.9 28.4 262 519-784 62-500 (599)
251 3nok_A Glutaminyl cyclase; bet 98.7 1.1E-06 3.8E-11 90.8 21.8 188 541-736 45-255 (268)
252 1kv9_A Type II quinohemoprotei 98.7 1.3E-06 4.4E-11 103.5 25.5 253 519-775 117-520 (668)
253 2iwa_A Glutamine cyclotransfer 98.7 3.7E-06 1.3E-10 87.6 25.6 201 495-704 7-237 (266)
254 1k3i_A Galactose oxidase precu 98.7 6.9E-07 2.4E-11 105.6 21.1 264 512-776 190-530 (656)
255 3mbr_X Glutamine cyclotransfer 98.7 5.4E-06 1.8E-10 84.9 24.7 192 540-736 10-224 (243)
256 2fp8_A Strictosidine synthase; 98.7 5.9E-06 2E-10 88.1 26.0 229 551-784 20-310 (322)
257 3v9f_A Two-component system se 98.6 3.2E-05 1.1E-09 93.1 34.7 268 507-783 210-520 (781)
258 3v64_C Agrin; beta propeller, 98.6 4.7E-05 1.6E-09 82.6 32.4 237 506-748 32-277 (349)
259 3nol_A Glutamine cyclotransfer 98.6 5.1E-06 1.8E-10 85.8 22.8 191 495-695 29-245 (262)
260 2ad6_A Methanol dehydrogenase 98.6 4.1E-06 1.4E-10 97.3 24.2 252 519-773 115-523 (571)
261 3v65_B Low-density lipoprotein 98.6 4.7E-05 1.6E-09 83.8 31.7 237 508-749 77-321 (386)
262 2p4o_A Hypothetical protein; p 98.6 3.1E-05 1.1E-09 82.0 29.0 219 550-777 32-278 (306)
263 1flg_A Protein (quinoprotein e 98.6 2.2E-05 7.5E-10 91.3 29.9 263 519-784 68-513 (582)
264 1w6s_A Methanol dehydrogenase 98.5 2.6E-05 8.9E-10 90.8 29.1 249 522-774 124-534 (599)
265 2xbg_A YCF48-like protein; pho 98.5 0.00028 9.5E-09 75.6 35.1 276 494-784 24-319 (327)
266 2xe4_A Oligopeptidase B; hydro 98.5 6.2E-06 2.1E-10 99.0 23.3 237 509-750 175-462 (751)
267 1ijq_A LDL receptor, low-densi 98.5 0.00042 1.4E-08 73.8 35.3 223 521-748 3-240 (316)
268 1flg_A Protein (quinoprotein e 98.5 4.3E-05 1.5E-09 88.9 29.2 254 519-774 117-547 (582)
269 3nok_A Glutaminyl cyclase; bet 98.4 2E-05 6.8E-10 81.5 21.5 174 595-775 57-253 (268)
270 3mbr_X Glutamine cyclotransfer 98.4 7.9E-05 2.7E-09 76.2 25.4 178 593-776 21-223 (243)
271 3sov_A LRP-6, low-density lipo 98.4 0.0002 6.9E-09 76.6 29.3 227 521-749 6-241 (318)
272 1ijq_A LDL receptor, low-densi 98.4 0.00058 2E-08 72.7 32.9 216 563-783 3-234 (316)
273 3v64_C Agrin; beta propeller, 98.4 0.00024 8.3E-09 76.9 29.9 214 507-722 72-293 (349)
274 3p5b_L Low density lipoprotein 98.4 0.00094 3.2E-08 73.7 34.9 226 521-750 85-324 (400)
275 3v65_B Low-density lipoprotein 98.4 0.00017 5.7E-09 79.3 28.6 215 507-723 115-337 (386)
276 3tc9_A Hypothetical hydrolase; 98.4 9.2E-05 3.2E-09 82.7 26.6 232 509-745 138-429 (430)
277 3tc9_A Hypothetical hydrolase; 98.3 8.5E-05 2.9E-09 83.0 25.7 230 550-783 137-426 (430)
278 3p5b_L Low density lipoprotein 98.3 0.00099 3.4E-08 73.5 32.6 217 563-783 85-316 (400)
279 3qqz_A Putative uncharacterize 98.3 0.00072 2.5E-08 69.8 29.2 200 501-702 20-251 (255)
280 4hw6_A Hypothetical protein, I 98.2 0.00027 9.1E-09 79.0 27.3 233 508-745 139-432 (433)
281 3sov_A LRP-6, low-density lipo 98.2 0.00055 1.9E-08 73.1 28.6 219 563-783 6-234 (318)
282 3qqz_A Putative uncharacterize 98.2 0.00029 1E-08 72.8 25.3 195 587-783 21-249 (255)
283 3m0c_C LDL receptor, low-densi 98.2 0.001 3.4E-08 79.8 33.1 235 510-749 387-635 (791)
284 2xe4_A Oligopeptidase B; hydro 98.2 5.9E-05 2E-09 90.4 20.7 188 594-783 175-394 (751)
285 4hw6_A Hypothetical protein, I 98.1 0.00041 1.4E-08 77.5 26.0 229 551-783 140-429 (433)
286 1k3i_A Galactose oxidase precu 98.1 0.00015 5.2E-09 85.4 22.1 223 554-777 190-476 (656)
287 3amr_A 3-phytase; beta-propell 98.1 0.00081 2.8E-08 72.2 25.3 192 518-712 39-272 (355)
288 3kya_A Putative phosphatase; s 98.0 0.00096 3.3E-08 75.3 26.4 239 509-750 140-479 (496)
289 3kya_A Putative phosphatase; s 98.0 0.0017 5.7E-08 73.4 27.1 230 551-783 140-471 (496)
290 3m0c_C LDL receptor, low-densi 98.0 0.0056 1.9E-07 73.4 32.9 214 563-781 397-626 (791)
291 2xbg_A YCF48-like protein; pho 98.0 0.0042 1.4E-07 66.3 28.8 228 507-744 79-320 (327)
292 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0077 2.6E-07 70.4 32.6 216 563-782 8-232 (628)
293 3ott_A Two-component system se 97.9 0.046 1.6E-06 65.1 39.7 261 507-780 62-346 (758)
294 4a0p_A LRP6, LRP-6, low-densit 97.9 0.017 5.8E-07 67.5 34.1 222 521-748 8-239 (628)
295 3s94_A LRP-6, low-density lipo 97.8 0.0051 1.7E-07 71.8 28.5 220 528-749 17-246 (619)
296 2ism_A Putative oxidoreductase 97.8 0.0024 8.4E-08 69.0 23.6 223 506-734 29-333 (352)
297 2xzh_A Clathrin heavy chain 1; 97.8 0.057 1.9E-06 57.1 32.2 233 513-750 72-336 (365)
298 1n7d_A LDL receptor, low-densi 97.8 0.00011 3.6E-09 87.5 13.1 221 528-751 385-619 (699)
299 3ott_A Two-component system se 97.8 0.063 2.1E-06 63.9 37.0 258 507-778 21-299 (758)
300 3a9g_A Putative uncharacterize 97.8 0.015 5E-07 62.9 28.6 225 506-733 27-329 (354)
301 3ei3_A DNA damage-binding prot 97.7 0.025 8.5E-07 70.7 33.9 272 506-784 552-910 (1158)
302 2ism_A Putative oxidoreductase 97.7 0.01 3.4E-07 64.1 25.4 219 550-775 31-333 (352)
303 3amr_A 3-phytase; beta-propell 97.6 0.0079 2.7E-07 64.6 23.8 185 560-750 39-268 (355)
304 3sre_A PON1, serum paraoxonase 97.6 0.012 4.2E-07 63.6 25.2 194 508-703 50-297 (355)
305 1n7d_A LDL receptor, low-densi 97.6 0.00013 4.4E-09 86.7 10.5 214 508-723 406-633 (699)
306 3ei3_A DNA damage-binding prot 97.6 0.078 2.7E-06 66.2 35.8 225 554-783 697-995 (1158)
307 3s94_A LRP-6, low-density lipo 97.6 0.12 3.9E-06 60.3 34.5 225 521-749 319-554 (619)
308 2vpj_A Kelch-like protein 12; 97.6 0.0082 2.8E-07 62.6 22.5 225 518-750 14-282 (301)
309 3a9g_A Putative uncharacterize 97.6 0.028 9.7E-07 60.7 27.3 222 550-775 29-330 (354)
310 1bpo_A Protein (clathrin); cla 97.5 0.13 4.6E-06 56.3 31.6 233 513-750 71-335 (494)
311 2p9w_A MAL S 1 allergenic prot 97.5 0.0038 1.3E-07 66.4 19.2 150 635-784 15-212 (334)
312 2xzh_A Clathrin heavy chain 1; 97.5 0.15 5E-06 54.0 33.7 242 528-780 48-325 (365)
313 2p9w_A MAL S 1 allergenic prot 97.5 0.022 7.4E-07 60.7 24.3 190 592-782 12-260 (334)
314 2g8s_A Glucose/sorbosone dehyd 97.4 0.028 9.5E-07 60.7 24.4 227 551-780 19-347 (353)
315 2g8s_A Glucose/sorbosone dehyd 97.4 0.072 2.5E-06 57.4 27.2 224 507-733 17-340 (353)
316 1bpo_A Protein (clathrin); cla 97.3 0.28 9.7E-06 53.8 36.0 243 528-780 47-324 (494)
317 3das_A Putative oxidoreductase 97.3 0.14 4.8E-06 55.0 28.5 234 498-734 22-326 (347)
318 3das_A Putative oxidoreductase 97.3 0.19 6.6E-06 53.9 29.0 225 548-775 30-326 (347)
319 2xn4_A Kelch-like protein 2; s 97.3 0.023 7.9E-07 59.2 21.3 225 519-752 16-282 (302)
320 3ii7_A Kelch-like protein 7; p 97.2 0.043 1.5E-06 57.3 23.1 220 521-750 14-276 (306)
321 3sre_A PON1, serum paraoxonase 97.2 0.018 6.2E-07 62.2 20.4 191 551-745 51-297 (355)
322 3s25_A Hypothetical 7-bladed b 97.0 0.03 1E-06 59.2 19.5 195 559-774 23-240 (302)
323 3s25_A Hypothetical 7-bladed b 97.0 0.13 4.5E-06 54.1 24.2 176 513-705 58-256 (302)
324 1zgk_A Kelch-like ECH-associat 96.9 0.045 1.5E-06 57.3 20.0 225 518-751 24-292 (308)
325 3ii7_A Kelch-like protein 7; p 96.9 0.078 2.7E-06 55.2 21.2 208 562-777 13-257 (306)
326 2vpj_A Kelch-like protein 12; 96.9 0.046 1.6E-06 56.8 19.1 212 560-778 14-264 (301)
327 2xn4_A Kelch-like protein 2; s 96.8 0.073 2.5E-06 55.3 20.3 208 562-778 17-262 (302)
328 3pbp_A Nucleoporin NUP82; beta 96.8 0.043 1.5E-06 60.2 18.5 129 653-781 40-206 (452)
329 4asc_A Kelch repeat and BTB do 96.8 0.13 4.3E-06 53.9 22.1 224 521-752 7-283 (315)
330 4asc_A Kelch repeat and BTB do 96.6 0.094 3.2E-06 55.0 19.4 207 563-777 7-253 (315)
331 2woz_A Kelch repeat and BTB do 96.5 0.32 1.1E-05 50.9 22.8 223 521-752 18-293 (318)
332 2uvk_A YJHT; unknown function, 96.4 0.13 4.4E-06 54.8 19.3 226 518-752 19-348 (357)
333 1cru_A Protein (soluble quinop 96.3 1.4 4.9E-05 48.9 27.8 106 507-612 26-163 (454)
334 2woz_A Kelch repeat and BTB do 96.3 0.28 9.4E-06 51.4 20.8 208 563-777 18-263 (318)
335 1xi4_A Clathrin heavy chain; a 96.1 0.26 9E-06 61.5 21.4 213 528-750 47-293 (1630)
336 2be1_A Serine/threonine-protei 96.1 0.26 8.8E-06 52.7 19.0 187 562-751 11-236 (339)
337 1cru_A Protein (soluble quinop 95.9 2.7 9.4E-05 46.6 29.9 103 550-652 27-163 (454)
338 3b7f_A Glycosyl hydrolase, BNR 95.9 2.4 8E-05 45.7 28.9 253 507-765 54-391 (394)
339 1xi4_A Clathrin heavy chain; a 95.8 0.26 9E-06 61.5 19.7 232 514-750 72-335 (1630)
340 4hvt_A Ritya.17583.B, post-pro 95.8 0.54 1.8E-05 55.5 22.1 237 511-749 132-432 (711)
341 1zgk_A Kelch-like ECH-associat 95.8 0.48 1.6E-05 49.3 19.5 181 518-706 70-289 (308)
342 3b7f_A Glycosyl hydrolase, BNR 95.7 2.9 9.8E-05 45.1 28.1 258 521-782 24-367 (394)
343 3sbq_A Nitrous-oxide reductase 95.7 1.3 4.4E-05 50.1 22.6 252 522-775 73-453 (638)
344 2be1_A Serine/threonine-protei 95.6 0.22 7.4E-06 53.3 15.7 188 520-709 11-236 (339)
345 1tl2_A L10, protein (tachylect 95.5 1.4 4.9E-05 43.9 20.1 171 561-740 4-204 (236)
346 4b8c_D Glucose-repressible alc 95.5 0.0014 5E-08 78.0 -1.9 7 614-620 487-493 (727)
347 1tl2_A L10, protein (tachylect 95.3 0.41 1.4E-05 47.8 15.4 141 633-780 41-203 (236)
348 3pbp_A Nucleoporin NUP82; beta 95.3 0.81 2.8E-05 50.1 19.0 142 516-659 29-208 (452)
349 2uvk_A YJHT; unknown function, 95.2 0.94 3.2E-05 48.0 19.3 188 518-711 65-349 (357)
350 2zwa_A Leucine carboxyl methyl 94.8 0.94 3.2E-05 53.3 19.8 192 559-750 396-639 (695)
351 2zwa_A Leucine carboxyl methyl 94.6 1.3 4.5E-05 52.0 20.2 189 517-708 396-639 (695)
352 2wg3_C Hedgehog-interacting pr 94.3 8.3 0.00028 42.8 26.3 224 550-775 14-354 (463)
353 3sbq_A Nitrous-oxide reductase 94.0 3.3 0.00011 46.8 20.2 181 603-784 141-405 (638)
354 3qhy_B Beta-lactamase inhibito 93.8 3.3 0.00011 42.7 19.1 238 509-768 25-265 (282)
355 3iot_A Maltose-binding protein 93.3 0.016 5.6E-07 64.5 0.4 11 284-294 285-295 (449)
356 3qhy_B Beta-lactamase inhibito 93.1 3.5 0.00012 42.6 17.8 215 550-783 24-242 (282)
357 2wg3_C Hedgehog-interacting pr 92.9 14 0.00047 41.0 29.4 227 508-734 14-354 (463)
358 3q6k_A 43.2 kDa salivary prote 91.5 16 0.00054 39.4 20.9 142 634-775 153-342 (381)
359 1sqj_A OXG-RCBH, oligoxylogluc 90.4 34 0.0012 40.6 26.1 145 507-653 14-190 (789)
360 3uc1_A DNA gyrase subunit A; D 89.9 22 0.00074 37.4 22.4 258 519-778 3-321 (327)
361 1suu_A DNA gyrase subunit A; t 87.7 29 0.00099 36.1 24.5 185 558-746 5-231 (312)
362 1suu_A DNA gyrase subunit A; t 87.6 29 0.00099 36.1 24.8 225 517-744 6-281 (312)
363 3mvd_K Regulator of chromosome 86.7 38 0.0013 36.5 33.9 225 550-783 75-370 (423)
364 1sqj_A OXG-RCBH, oligoxylogluc 86.4 59 0.002 38.4 27.7 142 549-693 14-188 (789)
365 3no0_A DNA gyrase subunit A; D 85.5 34 0.0012 34.9 21.8 193 549-746 23-246 (276)
366 1uuj_A Platelet-activating fac 83.4 0.42 1.4E-05 40.1 1.7 31 11-41 12-42 (88)
367 3l6v_A GYRA, DNA gyrase subuni 82.9 54 0.0018 35.0 23.3 229 516-745 4-315 (370)
368 1zi0_A DNA gyrase subunit A; b 82.0 51 0.0017 34.1 24.3 228 517-746 1-277 (307)
369 1qb3_A Cyclin-dependent kinase 80.5 0.31 1.1E-05 44.3 -0.2 9 161-169 13-21 (150)
370 3no0_A DNA gyrase subunit A; D 78.4 62 0.0021 32.9 21.8 152 508-662 24-195 (276)
371 3l6v_A GYRA, DNA gyrase subuni 78.1 77 0.0026 33.8 22.9 220 557-780 3-309 (370)
372 2xtc_A F-box-like/WD repeat-co 77.2 1.6 5.5E-05 36.7 3.2 32 11-42 7-38 (90)
373 1wp5_A Topoisomerase IV; broke 76.4 78 0.0027 33.0 23.5 229 517-746 3-277 (323)
374 3uc1_A DNA gyrase subunit A; D 73.4 93 0.0032 32.5 22.8 220 561-782 3-274 (327)
375 4gq2_M Nucleoporin NUP120; bet 72.4 1.8E+02 0.006 35.2 22.4 37 676-712 237-274 (950)
376 2cn3_A Xyloglucanase, beta-1,4 71.9 1.5E+02 0.0053 34.4 24.9 184 508-693 23-262 (737)
377 4hvt_A Ritya.17583.B, post-pro 70.8 1.6E+02 0.0054 34.3 19.4 180 596-780 132-372 (711)
378 1zi0_A DNA gyrase subunit A; b 70.3 1E+02 0.0035 31.7 24.3 219 559-781 1-271 (307)
379 4gq2_M Nucleoporin NUP120; bet 66.7 62 0.0021 39.2 15.3 34 550-583 236-269 (950)
380 3kci_A Probable E3 ubiquitin-p 62.3 1.6E+02 0.0055 31.1 31.8 225 552-783 55-341 (389)
381 3q6k_A 43.2 kDa salivary prote 58.4 2E+02 0.0067 30.8 22.2 163 530-693 124-342 (381)
382 3kci_A Probable E3 ubiquitin-p 56.8 2E+02 0.0068 30.4 30.0 229 510-746 55-345 (389)
383 4fhn_B Nucleoporin NUP120; pro 55.2 1.6E+02 0.0054 36.4 16.3 34 717-750 239-272 (1139)
384 4a9v_A PHOX; hydrolase, beta-p 53.5 2.1E+02 0.0072 32.4 15.2 60 675-734 476-549 (592)
385 1wp5_A Topoisomerase IV; broke 53.1 2.1E+02 0.0073 29.6 23.2 185 559-746 3-225 (323)
386 4d9s_A UVB-resistance protein 48.9 2.7E+02 0.0092 29.5 34.2 264 508-783 16-353 (406)
387 3zwu_A Alkaline phosphatase PH 47.8 1.4E+02 0.0048 34.0 13.0 57 636-692 479-548 (592)
388 3f7f_A Nucleoporin NUP120; nuc 47.7 3.9E+02 0.013 31.1 18.1 36 676-713 223-259 (729)
389 2zux_A YESW protein; beta-prop 45.7 3.7E+02 0.013 30.3 23.6 229 506-748 177-481 (591)
390 1a12_A RCC1, regulator of chro 38.7 3.8E+02 0.013 28.3 32.9 221 550-783 59-361 (413)
391 3mvd_K Regulator of chromosome 37.5 3.9E+02 0.013 28.2 34.8 225 509-746 76-374 (423)
392 4fhn_B Nucleoporin NUP120; pro 36.4 72 0.0025 39.5 8.9 32 551-582 239-270 (1139)
393 3mez_B Mannose-specific lectin 36.3 2E+02 0.007 24.5 10.1 59 645-704 25-84 (113)
394 2cn3_A Xyloglucanase, beta-1,4 32.2 6.4E+02 0.022 29.0 26.4 59 551-611 24-91 (737)
395 3zwu_A Alkaline phosphatase PH 30.4 99 0.0034 35.2 8.0 59 509-567 477-548 (592)
396 4a9v_A PHOX; hydrolase, beta-p 28.3 1.5E+02 0.0052 33.5 8.9 61 508-568 476-549 (592)
397 3f7f_A Nucleoporin NUP120; nuc 24.4 89 0.003 36.4 6.2 37 508-546 222-258 (729)
398 1zvt_A Topoisomerase IV subuni 24.1 5.3E+02 0.018 25.5 16.5 174 562-738 3-210 (256)
399 2d68_A FOP, FGFR1OP; alpha hel 23.5 72 0.0025 26.2 3.8 32 10-41 19-50 (82)
400 4h3o_A Lectin; cadmium, plant 22.7 3.4E+02 0.012 22.8 9.3 24 679-703 54-77 (105)
401 3mez_B Mannose-specific lectin 22.4 3.6E+02 0.012 22.9 10.0 14 647-660 92-105 (113)
402 4d9s_A UVB-resistance protein 22.3 6.9E+02 0.024 26.2 32.0 227 508-746 68-357 (406)
403 3mez_A Mannose-specific lectin 20.5 2.5E+02 0.0084 23.9 7.0 23 679-701 53-75 (111)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-42 Score=385.36 Aligned_cols=283 Identities=24% Similarity=0.457 Sum_probs=265.4
Q ss_pred EeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCC
Q 047260 500 VGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAA 579 (784)
Q Consensus 500 i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~ 579 (784)
...+.+|.+.|++++|+|++.+|++|+.||+|+|||+.+++....+.+|...|++++|+|++++|++|+.|++|+|||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 44578999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcE
Q 047260 580 NPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVV 656 (784)
Q Consensus 580 ~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I 656 (784)
+.. +...+.+|...|.+++|+|++. ++++++.|+.|++||+++..++..+. ..+.++.+++++..|++++.|+.|
T Consensus 181 ~~~-~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 181 GFE-CIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp SSC-EEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCc-eeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 766 6778889999999999999987 78899999999999999888776554 568899999999999999999999
Q ss_pred EEEECCCCeEEEEEeCCCCCEEEEEEcCC--------------------CCEEEEEeCC-eEEEEeCCCCceEEEeccCC
Q 047260 657 SIFDIETDRQTHSLQGHAELVNYICWDTN--------------------GDYLASVSQN-LVKVWSMASGECIQELSSNG 715 (784)
Q Consensus 657 ~IwDl~t~~~i~~l~~h~~~V~sl~~spd--------------------g~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~ 715 (784)
++||+++++....+.+|...|.+++|+|+ +.+|++++.+ .|++||++++.++.++.+|.
T Consensus 259 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 259 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 99999999999999999999999999996 6789999866 99999999999999999999
Q ss_pred CceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 716 NQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 716 ~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
..|.+++|+|++.+|++++.|+.|++||+.+++++ .+.+|...|++++|+|++.+|++|+.||.|+|||
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 99999999999999999999999999999988766 7779999999999999999999999999999997
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.3e-41 Score=368.67 Aligned_cols=288 Identities=20% Similarity=0.332 Sum_probs=264.5
Q ss_pred cceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEE
Q 047260 495 FTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVR 574 (784)
Q Consensus 495 ~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~ 574 (784)
..+....++++|.+.|++++|+||+++|++|+.||+|+|||+.+++.+..+..|...|.+++|+|++++|++|+.|+.|+
T Consensus 43 ~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 43 IQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp CCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred ccchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEE
Confidence 45667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCc---ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEE
Q 047260 575 LWDAANPN---FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLL 648 (784)
Q Consensus 575 IWdl~~~~---~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll 648 (784)
+||+.+.. .....+.+|...|.++.|++++ .+++++.|+.|++||+++...+..+. ..+.+++|+|++..++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 99998753 2455677999999999999876 47889999999999999988776654 6789999999999999
Q ss_pred EEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccC--CCceEEEEEec
Q 047260 649 AAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSN--GNQFHSCVFHP 725 (784)
Q Consensus 649 ~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~--~~~I~sl~fsp 725 (784)
+++.|+.|++||+++++.+..+.+|...|.+++|+|++.+|++++.+ .|+|||+++++.+..+..+ ...|.+++|+|
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 99999999999999999999999999999999999999999999966 9999999999888777533 34799999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 726 SYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 726 dg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
++.+|++++.|+.|++||+.+++.. .+.+|.+.|.+++|+|++.+|++|+.||.|+|||
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999988776 6789999999999999999999999999999997
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=364.20 Aligned_cols=284 Identities=16% Similarity=0.296 Sum_probs=259.3
Q ss_pred EEeEeecCCCceEEEEEcCC----CCEEEEEeCCCeEEEEECCCCce--eeecCCCCCCeEEEEEccCCCEEEEEeCCCe
Q 047260 499 EVGCIRSRNSKVTCCHFSSD----GKLLASSGHDRKVVLWNMDTLQT--ESTPEDHKSVVTDVRFRPNSSQLATASVDKS 572 (784)
Q Consensus 499 ~i~~l~~H~~~V~~l~fspd----g~~Lasgs~Dg~I~IWd~~t~~~--~~~l~~h~~~It~i~fspdg~~Latgs~Dg~ 572 (784)
.++.+.+|.+.|++++|+|+ +.+|++|+.|++|+|||+.+.+. ...+.+|...|.+++|++++.++++++.|++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 34567789999999999984 66999999999999999987653 4568899999999999999999999999999
Q ss_pred EEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEE
Q 047260 573 VRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLA 649 (784)
Q Consensus 573 I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~ 649 (784)
|++||+.+++ ....+..|...+.+++|+|++. ++++++.|+.|++||+++......+. ..+.+++|+|++.+|++
T Consensus 104 i~lWd~~~~~-~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 104 IRLWDLENGK-QIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp EEEEETTTTE-EEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEE
Confidence 9999999876 5667778888999999999987 78889999999999999877665543 56899999999999999
Q ss_pred EECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCC
Q 047260 650 AASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYS 728 (784)
Q Consensus 650 ~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~ 728 (784)
++.|+.|++||+++++.+..+.+|...|.+++|+|++.+|++++.+ .|+|||+++++++.++.+|...|.+++|+|++.
T Consensus 182 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 261 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 261 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCC
Confidence 9999999999999999999999999999999999999999999966 999999999999999999999999999999999
Q ss_pred EEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 729 TLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 729 ~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+|++++.|++|++||+.+++++ .+.+|...|.+++|+|++.+|++++.||.|+|||
T Consensus 262 ~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 262 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 9999999999999999999887 6779999999999999999999999999999997
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.1e-40 Score=358.71 Aligned_cols=289 Identities=17% Similarity=0.287 Sum_probs=260.9
Q ss_pred cceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEE
Q 047260 495 FTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVR 574 (784)
Q Consensus 495 ~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~ 574 (784)
+.+.....+.+|.+.|+|++|+|++++||+|+.||+|+|||..+++....+..|...|.+++|+|++.+|++++.|+.|+
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~ 131 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCS 131 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEE
T ss_pred cccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEE
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCc-----ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEec--CC
Q 047260 575 LWDAANPN-----FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQP--RI 644 (784)
Q Consensus 575 IWdl~~~~-----~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp--~~ 644 (784)
+|++.... .....+.+|...|.+++|+|++. .+++++.|+.|++||+++.+++..+. ..+.++.|+| ++
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g 210 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 210 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC
Confidence 99986532 23455668999999999999976 67789999999999999887776554 5688888887 46
Q ss_pred CEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccC--CCceEEE
Q 047260 645 GQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSN--GNQFHSC 721 (784)
Q Consensus 645 ~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~--~~~I~sl 721 (784)
..|++++.|+.|++||+++++++..+.+|...|++++|+|++.+|++++.| +|++||++.++.+..+..+ ...+.++
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 290 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEE
Confidence 799999999999999999999999999999999999999999999999966 9999999999888777644 3468999
Q ss_pred EEecCCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 722 VFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 722 ~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+|+|++.+|++++.|+.|++||+.+++.+ .+.+|.+.|++++|+|++.+|++|+.||.|+||+
T Consensus 291 ~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 291 DFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999888776 6779999999999999999999999999999997
No 5
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.8e-41 Score=370.92 Aligned_cols=289 Identities=18% Similarity=0.320 Sum_probs=260.5
Q ss_pred ceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q 047260 496 TFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRL 575 (784)
Q Consensus 496 ~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~I 575 (784)
.+....++.+|.+.|++++|+|++++|++|+.||+|+|||+.+++....+..|...|.+++|+|++++|++|+.|+.|+|
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i 134 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI 134 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCc------ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee--------cCCeeEEEEe
Q 047260 576 WDAANPN------FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT--------KGGTAQVRFQ 641 (784)
Q Consensus 576 Wdl~~~~------~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~--------~~~v~~v~fs 641 (784)
||+.+.. .....+.+|.+.|.++.|.|++...|++|+.|+.|++||+++..++..+ ...+.++.|+
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 9987532 2345678999999999999988878999999999999999988777554 3568889997
Q ss_pred c-CCCEEEEEECCCcEEEEECC-CCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCC---
Q 047260 642 P-RIGQLLAAASDKVVSIFDIE-TDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNG--- 715 (784)
Q Consensus 642 p-~~~~Ll~~s~Dg~I~IwDl~-t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~--- 715 (784)
+ ++..|++++.|+.|++||++ ..+.+..+.+|...|.+++|+|++.+|+++++| +|+|||+++++++..+..+.
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 7 77899999999999999998 457888899999999999999999999999966 99999999999988886543
Q ss_pred ----CceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-Ee----cccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 716 ----NQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TI----AAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 716 ----~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~----~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
..|.+++|+|++.+|++++.||.|++||+..++.. .+ .+|.+.|++++|+|++.+|++|+.||.|+||+
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 24899999999999999999999999999988776 33 57999999999999999999999999999996
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-39 Score=348.92 Aligned_cols=282 Identities=18% Similarity=0.299 Sum_probs=253.1
Q ss_pred eEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 498 CEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 498 ~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
...+++.+|.+.|++++|+|++++|++|+.||.|+|||+.++..+..+..|...|.+++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC-eeEE---eecCCeeEEEEec-CCCEEEEEEC
Q 047260 578 AANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF-LCTH---ITKGGTAQVRFQP-RIGQLLAAAS 652 (784)
Q Consensus 578 l~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~-~~~~---~~~~~v~~v~fsp-~~~~Ll~~s~ 652 (784)
+.+++ ....+.+|...|.+++|+|++. ++++++.|+.|++||+++. .... .+...+.+++|+| ++..|++++.
T Consensus 84 ~~~~~-~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 84 YNTGE-KVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp TTTCC-EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred CCCCc-EEEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 99877 6677889999999999999987 7889999999999999865 3333 3456789999999 5688999999
Q ss_pred CCcEEEEECCCCeEEEEEe-CCCCCEEEEEEcC--CCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCC
Q 047260 653 DKVVSIFDIETDRQTHSLQ-GHAELVNYICWDT--NGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYS 728 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~l~-~h~~~V~sl~~sp--dg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~ 728 (784)
|+.|++||++.......+. +|...+..++|+| ++.+|++++.+ .|+|||+++++++.++.+|...|.+++|+|++.
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 9999999998887666654 4668899999987 77899999966 999999999999999999999999999999999
Q ss_pred EEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCC--EEEEEECCCcEE
Q 047260 729 TLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTG--MVASASHDSSVK 781 (784)
Q Consensus 729 ~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~--~LaSgs~DG~V~ 781 (784)
+|++++.||+|++||+.+++.. .+..|...+.+++|+|++. +|++|+.||.+.
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~ 297 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEE
T ss_pred EEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEE
Confidence 9999999999999999998877 6778899999999999875 688888777543
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.1e-39 Score=384.13 Aligned_cols=320 Identities=20% Similarity=0.302 Sum_probs=269.9
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEE
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHF 515 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~f 515 (784)
++...+.++.|.++....+.+|+.|+++++|+.. +...+..+.+|.+.|++++|
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~--------------------------~~~~~~~l~~H~~~V~~v~f 198 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP--------------------------PFKFKSTFGEHTKFVHSVRY 198 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT--------------------------TBEEEEEECCCSSCEEEEEE
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC--------------------------CCeEeeeeccccCceEEEEE
Confidence 4455567777877776666789999999999641 12345678899999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCceeeecC-------CCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcce----
Q 047260 516 SSDGKLLASSGHDRKVVLWNMDTLQTESTPE-------DHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFC---- 584 (784)
Q Consensus 516 spdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~-------~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~---- 584 (784)
+|||++||+|+.|++|+|||+.+++.+..+. +|.+.|++++|+|++++|++++.|++|+|||+.+++..
T Consensus 199 spdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 199 NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 9999999999999999999999998888774 79999999999999999999999999999999875421
Q ss_pred --------------------------------------eeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe
Q 047260 585 --------------------------------------SQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL 626 (784)
Q Consensus 585 --------------------------------------~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~ 626 (784)
...+.+|...|.+++|+|++. +|++++.|+.|++||+.+..
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 279 VGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp CCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCC
T ss_pred CCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCc
Confidence 123458999999999999987 77899999999999987543
Q ss_pred eEEee---------------------------------------------------------------------------
Q 047260 627 CTHIT--------------------------------------------------------------------------- 631 (784)
Q Consensus 627 ~~~~~--------------------------------------------------------------------------- 631 (784)
+...+
T Consensus 358 ~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~ 437 (611)
T 1nr0_A 358 SNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 437 (611)
T ss_dssp EEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEE
T ss_pred eeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEE
Confidence 32111
Q ss_pred ----------cCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeE--EEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEE
Q 047260 632 ----------KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQ--THSLQGHAELVNYICWDTNGDYLASVSQN-LVK 698 (784)
Q Consensus 632 ----------~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~--i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~ 698 (784)
...+.+++|+|++.+|++++.|+.|++||+..+.. +.. .+|...|++++|+|+|++|++++.+ .|+
T Consensus 438 ~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~ 516 (611)
T 1nr0_A 438 SHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVI 516 (611)
T ss_dssp ETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEE
Confidence 12356789999999999999999999999987653 333 6799999999999999999999966 999
Q ss_pred EEeCCC-CceEEE--eccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCc-e--EEeccc-CCceEEEEEeCCCCEE
Q 047260 699 VWSMAS-GECIQE--LSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENK-S--MTIAAH-ENIISALAQSPVTGMV 771 (784)
Q Consensus 699 IwDl~t-~~~i~~--l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~-~--~~~~~h-~~~V~slafspdg~~L 771 (784)
+||+.+ ++++.. +..|...|.+++|+|++++|++++.|++|+|||+.++. . ..+.+| ...|.+++|+|++. |
T Consensus 517 ~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l 595 (611)
T 1nr0_A 517 PYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-I 595 (611)
T ss_dssp EEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-E
T ss_pred EEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-E
Confidence 999987 665543 33489999999999999999999999999999998765 2 345688 89999999999998 9
Q ss_pred EEEECCCcEEEeC
Q 047260 772 ASASHDSSVKLWK 784 (784)
Q Consensus 772 aSgs~DG~V~IWd 784 (784)
++++.|++|++||
T Consensus 596 ~s~~~D~~i~lW~ 608 (611)
T 1nr0_A 596 VSAGQDSNIKFWN 608 (611)
T ss_dssp EEEETTSCEEEEE
T ss_pred EEecCCCCEEEEe
Confidence 9999999999996
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=352.08 Aligned_cols=288 Identities=24% Similarity=0.461 Sum_probs=248.2
Q ss_pred ceeEEeEeecCCC-ceEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee---eecCCCCCCeEEEEEccCCCEEEEEeCCC
Q 047260 496 TFCEVGCIRSRNS-KVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTE---STPEDHKSVVTDVRFRPNSSQLATASVDK 571 (784)
Q Consensus 496 ~~~~i~~l~~H~~-~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~---~~l~~h~~~It~i~fspdg~~Latgs~Dg 571 (784)
.+..+..+.+|.+ .|++++|+|+|++||+|+.|++|+|||+.++... ....+|...|++++|+|++++|++|+.|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 3467788999988 9999999999999999999999999999877533 23368999999999999999999999999
Q ss_pred eEEEEcCCCCc-ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC---eeEEe---ecCCeeEEEEecCC
Q 047260 572 SVRLWDAANPN-FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF---LCTHI---TKGGTAQVRFQPRI 644 (784)
Q Consensus 572 ~I~IWdl~~~~-~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~---~~~~~---~~~~v~~v~fsp~~ 644 (784)
+|+|||+.... .+...+.+|...|.+++|+|++. +|++++.|+.|++||++.. .++.. +...+.+++|+|++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 99999998764 35677889999999999999986 8889999999999999764 23333 44678999999999
Q ss_pred CEEEEEECCCcEEEEECCCCe--EEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCC---------------c
Q 047260 645 GQLLAAASDKVVSIFDIETDR--QTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASG---------------E 706 (784)
Q Consensus 645 ~~Ll~~s~Dg~I~IwDl~t~~--~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~---------------~ 706 (784)
.+|++++.|+.|++||++.++ +...+.+|...|.+++|+|++++|++++.| +|+|||.... +
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 999999999999999998875 456788999999999999999999999966 9999996321 3
Q ss_pred eEEEecc-CCCceEEEEEecCCCEEEEEECCCeEEEEECCCCce-------E---EecccCCceEEEEEeCCC-CEEEEE
Q 047260 707 CIQELSS-NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKS-------M---TIAAHENIISALAQSPVT-GMVASA 774 (784)
Q Consensus 707 ~i~~l~~-~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~-------~---~~~~h~~~V~slafspdg-~~LaSg 774 (784)
++..+.+ |...|.+++|+|++..|++++.|+.|++|+...+.. + ...+|...|++|+|+|++ .+||+|
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred eeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence 4555655 788999999999999999999999999999876431 1 234799999999999998 499999
Q ss_pred ECCCcEEEeC
Q 047260 775 SHDSSVKLWK 784 (784)
Q Consensus 775 s~DG~V~IWd 784 (784)
+.||.|+|||
T Consensus 323 s~Dg~v~~W~ 332 (345)
T 3fm0_A 323 SDDGEVAFWK 332 (345)
T ss_dssp ETTSCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9999999996
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-38 Score=339.85 Aligned_cols=287 Identities=22% Similarity=0.461 Sum_probs=258.5
Q ss_pred ceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q 047260 496 TFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRL 575 (784)
Q Consensus 496 ~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~I 575 (784)
.+....++.+|.+.|++++|+|++++|++|+.||.|+||++.+++....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 35667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC
Q 047260 576 WDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS 652 (784)
Q Consensus 576 Wdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~ 652 (784)
||+++++ +...+.+|...|.+++|+|++. ++++++.|+.|++||+++.+++..+. ..+.++.|+|++..+++++.
T Consensus 92 wd~~~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 92 WDVSSGK-CLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EETTTCC-EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCc-EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 9999876 6677889999999999999976 78889999999999999887766554 67899999999999999999
Q ss_pred CCcEEEEECCCCeEEEEEe-CCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEE--EEE-ecCC
Q 047260 653 DKVVSIFDIETDRQTHSLQ-GHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHS--CVF-HPSY 727 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~l~-~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~s--l~f-spdg 727 (784)
|+.|++||+++++.+..+. .+...+.+++|+|++++|++++.+ .|++||+++++++..+..|...+.+ ..+ .+++
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 9999999999998887765 466789999999999999999855 9999999999999999887665432 233 4678
Q ss_pred CEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEE--CCCcEEEeC
Q 047260 728 STLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASAS--HDSSVKLWK 784 (784)
Q Consensus 728 ~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs--~DG~V~IWd 784 (784)
.+|++++.||.|++||+.+++.+ .+.+|...|.+++|+|++.+|++++ .|+.|+||+
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence 89999999999999999998877 6779999999999999999999997 699999996
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.6e-38 Score=343.25 Aligned_cols=285 Identities=22% Similarity=0.378 Sum_probs=250.2
Q ss_pred ceeEEeEeecCCCceEEEEEcCCC-CEEEEEeCCCeEEEEECCC-----CceeeecCCCCCCeEEEEEccCCCEEEEEeC
Q 047260 496 TFCEVGCIRSRNSKVTCCHFSSDG-KLLASSGHDRKVVLWNMDT-----LQTESTPEDHKSVVTDVRFRPNSSQLATASV 569 (784)
Q Consensus 496 ~~~~i~~l~~H~~~V~~l~fspdg-~~Lasgs~Dg~I~IWd~~t-----~~~~~~l~~h~~~It~i~fspdg~~Latgs~ 569 (784)
.+....++.+|.+.|++++|+|++ ++|++|+.|++|++|++.. +..+..+.+|...|++++|+|++++|++|+.
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 456678899999999999999965 8999999999999999863 3456778899999999999999999999999
Q ss_pred CCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE--eecCCeeEEEEecC----
Q 047260 570 DKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTH--ITKGGTAQVRFQPR---- 643 (784)
Q Consensus 570 Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~--~~~~~v~~v~fsp~---- 643 (784)
|++|+|||+.+++ ....+.+|...|.+++|+|++. ++++++.|+.|++||++...... .+...+.++.|.|.
T Consensus 86 D~~v~~wd~~~~~-~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 86 DKTLRLWDVATGE-TYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp TSEEEEEETTTTE-EEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC----
T ss_pred CCEEEEEECCCCC-eeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCC
Confidence 9999999999876 6777889999999999999876 88899999999999998543322 23467889999885
Q ss_pred --CCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEE
Q 047260 644 --IGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHS 720 (784)
Q Consensus 644 --~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~s 720 (784)
+..+++++.|+.|++||+++.+....+.+|...|.+++|+|++.+|++++.| .|+|||+.+++++..+..+ ..|.+
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~ 242 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFS 242 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEE
Confidence 4479999999999999999999999999999999999999999999999965 9999999999999988765 68999
Q ss_pred EEEecCCCEEEEEECCCeEEEEECCCCceEE-e--------cccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 721 CVFHPSYSTLLVVGGISSLELWNMAENKSMT-I--------AAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 721 l~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~-~--------~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
++|+|++.+|++++.+ .+++|++....... + ..|...|.+++|+|||++|++|+.||.|+|||
T Consensus 243 ~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 243 LAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp EEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 9999999988887755 59999998776542 2 24567899999999999999999999999996
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-38 Score=351.34 Aligned_cols=278 Identities=23% Similarity=0.416 Sum_probs=246.8
Q ss_pred ecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCC------------------CeEEEEEccCCCEEE
Q 047260 504 RSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKS------------------VVTDVRFRPNSSQLA 565 (784)
Q Consensus 504 ~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~------------------~It~i~fspdg~~La 565 (784)
.+|.+.|+|++|+|||++||+|+ ++.|+||++.+++.+..+..|.. .|++++|+|++++|+
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 36999999999999999999976 78899999999998887765542 499999999999999
Q ss_pred EEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee--cCCeeEEEEec-
Q 047260 566 TASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT--KGGTAQVRFQP- 642 (784)
Q Consensus 566 tgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~--~~~v~~v~fsp- 642 (784)
+|+.|++|+|||+.+++ ....+.+|...|.+++|+|++. .+++++.|+.|++||+++..+...+ ...+.+++|+|
T Consensus 140 s~~~d~~i~iwd~~~~~-~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRK-IVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EEcCCCeEEEEECCCCc-EEEEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 99999999999999866 6677889999999999999987 7788999999999999988776544 46789999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCeEEEEE-------eCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCC----------
Q 047260 643 RIGQLLAAASDKVVSIFDIETDRQTHSL-------QGHAELVNYICWDTNGDYLASVSQN-LVKVWSMAS---------- 704 (784)
Q Consensus 643 ~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l-------~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t---------- 704 (784)
++.+|++++.|+.|++||+++++.+..+ .+|...|.+++|+|++.+|++++.| .|++||+++
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 8899999999999999999999887776 5789999999999999999999965 999999975
Q ss_pred --CceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeC------CCCEEEEEE
Q 047260 705 --GECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSP------VTGMVASAS 775 (784)
Q Consensus 705 --~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafsp------dg~~LaSgs 775 (784)
+.+...+.+|...|.+++|+|++.+|++++.|+.|++||+.+++.+ .+.+|...|.+++|++ ++.+|++|+
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 3456678889999999999999999999999999999999998877 6779999999999986 678999999
Q ss_pred CCCcEEEeC
Q 047260 776 HDSSVKLWK 784 (784)
Q Consensus 776 ~DG~V~IWd 784 (784)
.||.|+|||
T Consensus 378 ~Dg~i~iW~ 386 (393)
T 1erj_A 378 GDCKARIWK 386 (393)
T ss_dssp TTSEEEEEE
T ss_pred CCCcEEECc
Confidence 999999996
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.1e-38 Score=341.79 Aligned_cols=285 Identities=19% Similarity=0.340 Sum_probs=243.6
Q ss_pred cceeEEeEeecCCCceEEEEE-----cC-CCCEEEEEeCCCeEEEEECCCC-------ceeeecCCCCCCeEEEEEccCC
Q 047260 495 FTFCEVGCIRSRNSKVTCCHF-----SS-DGKLLASSGHDRKVVLWNMDTL-------QTESTPEDHKSVVTDVRFRPNS 561 (784)
Q Consensus 495 ~~~~~i~~l~~H~~~V~~l~f-----sp-dg~~Lasgs~Dg~I~IWd~~t~-------~~~~~l~~h~~~It~i~fspdg 561 (784)
..+.....+.+|.+.|++++| ++ ++++|++|+.|++|+|||+.+. .....+.+|...|++++|+|++
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 345677889999999999999 77 9999999999999999999753 4566788999999999999999
Q ss_pred CEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE-----eecCCee
Q 047260 562 SQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTH-----ITKGGTA 636 (784)
Q Consensus 562 ~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~-----~~~~~v~ 636 (784)
.+|++|+.|++|+|||+++++ ....+.+|...|.+++|+|++. ++++++.|+.|++||+....... .+...+.
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~-~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGT-TYKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSC-EEEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred CEEEEEcCCCcEEEEECCCCc-EEEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 999999999999999999876 6677889999999999999987 77889999999999998543332 2345689
Q ss_pred EEEEecCC----------CEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCC-
Q 047260 637 QVRFQPRI----------GQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMAS- 704 (784)
Q Consensus 637 ~v~fsp~~----------~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t- 704 (784)
+++|+|++ .++++++.|+.|++|| ...+....+.+|...|.+++|+|+|++|++++.+ .|+|||+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999987 6899999999999999 4567778889999999999999999999999965 999999954
Q ss_pred CceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE---Eec-----------ccCCceEEEEEeCCCCE
Q 047260 705 GECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM---TIA-----------AHENIISALAQSPVTGM 770 (784)
Q Consensus 705 ~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~---~~~-----------~h~~~V~slafspdg~~ 770 (784)
......+ .+...|.+++|+|++.+++ ++.|+.|++||+.+++.. .+. +|...|.+++|+|++++
T Consensus 246 ~~~~~~~-~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~ 323 (343)
T 2xzm_R 246 TYPQREF-DAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKK 323 (343)
T ss_dssp SSCSEEE-ECSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCC
T ss_pred cccceee-cCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCe
Confidence 4444444 3456799999999998665 556788999999876543 222 67888999999999999
Q ss_pred EEEEECCCcEEEeC
Q 047260 771 VASASHDSSVKLWK 784 (784)
Q Consensus 771 LaSgs~DG~V~IWd 784 (784)
|++|+.||.|++||
T Consensus 324 l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 324 LFAGFTDGVIRTFS 337 (343)
T ss_dssp EEEEETTSEEEEEE
T ss_pred EEEecCCceEEEEE
Confidence 99999999999996
No 13
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-37 Score=361.85 Aligned_cols=281 Identities=29% Similarity=0.479 Sum_probs=252.2
Q ss_pred eEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 498 CEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 498 ~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
..+..+.+|...|++++|+|++++|++++.|+.|++||... ..+..+..|...|.+++|+|++++|++++.|+.|++||
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 34567889999999999999999999999999999999875 55667789999999999999999999999999999999
Q ss_pred CCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe--eEEeecCCeeEEEEecCCCEEEEEECCCc
Q 047260 578 AANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL--CTHITKGGTAQVRFQPRIGQLLAAASDKV 655 (784)
Q Consensus 578 l~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~--~~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~ 655 (784)
... + ....+.+|...|.+++|+|++. +|++++.|+.|++||..... .+..+...+.+++|+|++.+|++++.|+.
T Consensus 373 ~~~-~-~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~ 449 (577)
T 2ymu_A 373 RNG-Q-LLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT 449 (577)
T ss_dssp TTC-C-EEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCC-C-EEEEecCCCCCeEEEEECCCCC-EEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE
Confidence 653 3 5677889999999999999987 67788899999999976432 22345578999999999999999999999
Q ss_pred EEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEE
Q 047260 656 VSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 656 I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s 734 (784)
|++||. +++.+..+.+|...|.+++|+|++++|++++++ .|+|||. +++++..+.+|...|++++|+|++++|++++
T Consensus 450 v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 450 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp EEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 999996 567888899999999999999999999999866 9999995 6889999999999999999999999999999
Q ss_pred CCCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 735 GISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 735 ~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.|+.|+|||........+.+|.+.|++++|+||+++|+|++.|++|+|||
T Consensus 528 ~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 528 DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999975544458889999999999999999999999999999998
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.4e-38 Score=349.89 Aligned_cols=279 Identities=13% Similarity=0.195 Sum_probs=236.1
Q ss_pred ecCCCceEEEEEcCCCCEEEEEeC------CCeEEEEECCCCceeee----cCCCCCCeEEEEEccCCCEEEEEeCCCeE
Q 047260 504 RSRNSKVTCCHFSSDGKLLASSGH------DRKVVLWNMDTLQTEST----PEDHKSVVTDVRFRPNSSQLATASVDKSV 573 (784)
Q Consensus 504 ~~H~~~V~~l~fspdg~~Lasgs~------Dg~I~IWd~~t~~~~~~----l~~h~~~It~i~fspdg~~Latgs~Dg~I 573 (784)
..|+..|++++|+|||++||+|+. |+.|++|+..++..... ...|...|++++|+|++. +++++.||+|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 469999999999999999999997 78899999887654433 346889999999999875 5677889999
Q ss_pred EEEcCCCCccee---eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCC-E
Q 047260 574 RLWDAANPNFCS---QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIG-Q 646 (784)
Q Consensus 574 ~IWdl~~~~~~~---~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~-~ 646 (784)
+|||+.+++... ....+|...|.+++|+|++. +|++++.|+.|++||+++.+++..+. ..+.+++|++++. .
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 999998765322 23458999999999999987 78889999999999999988877654 6789999999875 6
Q ss_pred EEEEECCCcEEEEECCCCeEEEEEe--CCCCCEEEEEEcCC-CCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEE
Q 047260 647 LLAAASDKVVSIFDIETDRQTHSLQ--GHAELVNYICWDTN-GDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCV 722 (784)
Q Consensus 647 Ll~~s~Dg~I~IwDl~t~~~i~~l~--~h~~~V~sl~~spd-g~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~ 722 (784)
+++++.|+.|++||+++++.+..+. .+...+.+++|+|+ +.+|++++.+ .|++||+++++++.++..|...|.+++
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~ 276 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLA 276 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEE
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEE
Confidence 8889999999999999988766554 46778999999997 5678888765 999999999999999999999999999
Q ss_pred EecCC-CEEEEEECCCeEEEEECCCCceEEecccCCceEEEEEeC-CCCEEEEEECCCcEEEeC
Q 047260 723 FHPSY-STLLVVGGISSLELWNMAENKSMTIAAHENIISALAQSP-VTGMVASASHDSSVKLWK 784 (784)
Q Consensus 723 fspdg-~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafsp-dg~~LaSgs~DG~V~IWd 784 (784)
|+|++ .+|++++.|++|+|||+.+++.+...+|.+.|++|+|+| ++.+|++|+.||.|++||
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 99987 578899999999999999999998889999999999998 789999999999999996
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=346.59 Aligned_cols=277 Identities=15% Similarity=0.219 Sum_probs=233.8
Q ss_pred cCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------CceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeE
Q 047260 505 SRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDT-----------LQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSV 573 (784)
Q Consensus 505 ~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t-----------~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I 573 (784)
.|...|.+++|+|||++|++++ |+++++||... .........|...|++++|+|++ .|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4677899999999999999877 67788886321 11111122456789999999985 78899999999
Q ss_pred EEEcCCCCccee---eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCC-E
Q 047260 574 RLWDAANPNFCS---QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIG-Q 646 (784)
Q Consensus 574 ~IWdl~~~~~~~---~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~-~ 646 (784)
+|||+++++... ....+|...|++++|+|++. +|++|+.|+.|++||+++.+++..+. ..|.+++|++++. .
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 999999876322 23458999999999999987 78899999999999999988877654 6789999999985 6
Q ss_pred EEEEECCCcEEEEECCCCeEEEEEe--CCCCCEEEEEEcCC-CCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEE
Q 047260 647 LLAAASDKVVSIFDIETDRQTHSLQ--GHAELVNYICWDTN-GDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCV 722 (784)
Q Consensus 647 Ll~~s~Dg~I~IwDl~t~~~i~~l~--~h~~~V~sl~~spd-g~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~ 722 (784)
|++++.|+.|++||+++++.+..+. .+...+.+++|+|+ +.+|++++.+ .|+|||+++++++.++.+|...|++++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~ 264 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLV 264 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 7889999999999999998888775 35668999999985 5688888865 999999999999999999999999999
Q ss_pred EecCC-CEEEEEECCCeEEEEECCCCceEEecccCCceEEEEEeCCCC-EEEEEECCCcEEEeC
Q 047260 723 FHPSY-STLLVVGGISSLELWNMAENKSMTIAAHENIISALAQSPVTG-MVASASHDSSVKLWK 784 (784)
Q Consensus 723 fspdg-~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs~DG~V~IWd 784 (784)
|+|++ .+|++++.|++|+|||+.+++++.+.+|.+.|++++|+|++. +|++|+.||+|++|+
T Consensus 265 fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 265 FSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 99998 578999999999999999999999999999999999999986 678999999999995
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-38 Score=339.13 Aligned_cols=284 Identities=20% Similarity=0.324 Sum_probs=235.4
Q ss_pred eeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCC--ceeeec-CC-CCCCeEEEEEccCCCEEEEEeCCCe
Q 047260 497 FCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTL--QTESTP-ED-HKSVVTDVRFRPNSSQLATASVDKS 572 (784)
Q Consensus 497 ~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~--~~~~~l-~~-h~~~It~i~fspdg~~Latgs~Dg~ 572 (784)
+..+..+.+|.+.|++++|+++ +||+|+.|++|+|||+.++ .....+ .. |...|++++|+|++++|++|+.|++
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 4567889999999999999988 9999999999999999864 444555 34 9999999999999999999999999
Q ss_pred EEEEcCCCC------cceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC----CeeEEe---ecCCeeEEE
Q 047260 573 VRLWDAANP------NFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP----FLCTHI---TKGGTAQVR 639 (784)
Q Consensus 573 I~IWdl~~~------~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~----~~~~~~---~~~~v~~v~ 639 (784)
|+|||++.. ......+.+|...|.+++|+|++. +|++|+.|+.|++||++. .+++.. +...+.+++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 999998542 124566789999999999999987 888999999999999943 234433 456799999
Q ss_pred EecCCCEEEEEECCCcEEEEECCCC--eEEEEEeCCCCCEEEEEEcCC--CCEEEEEeCC-eEEEEeCCCC--------c
Q 047260 640 FQPRIGQLLAAASDKVVSIFDIETD--RQTHSLQGHAELVNYICWDTN--GDYLASVSQN-LVKVWSMASG--------E 706 (784)
Q Consensus 640 fsp~~~~Ll~~s~Dg~I~IwDl~t~--~~i~~l~~h~~~V~sl~~spd--g~~Lasgsdd-~I~IwDl~t~--------~ 706 (784)
|+|++..|++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.+|+++++| +|+|||+..+ .
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 9999999999999999999999876 678889999999999999998 7789998866 9999998764 4
Q ss_pred eEEEecc-CCCceEEEEEecCCCEEEEEECCCeEEEEECCCCce--E-E-ecccCC-ceEEEEEeC--CCCEEEEEECCC
Q 047260 707 CIQELSS-NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKS--M-T-IAAHEN-IISALAQSP--VTGMVASASHDS 778 (784)
Q Consensus 707 ~i~~l~~-~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~--~-~-~~~h~~-~V~slafsp--dg~~LaSgs~DG 778 (784)
++..+.. |...|.+++|++++ +|++++.||.|+|||..++.. . . ...|.. .|.+++|+| ++.+|++|+.||
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred EeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC
Confidence 4555654 88899999999765 799999999999999987742 2 2 356877 899999999 688999999999
Q ss_pred cEEEeC
Q 047260 779 SVKLWK 784 (784)
Q Consensus 779 ~V~IWd 784 (784)
.|+|||
T Consensus 320 ~v~~W~ 325 (330)
T 2hes_X 320 IVNFWS 325 (330)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 999996
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.6e-37 Score=364.07 Aligned_cols=314 Identities=16% Similarity=0.245 Sum_probs=268.5
Q ss_pred CcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCC
Q 047260 439 SLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSD 518 (784)
Q Consensus 439 ~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspd 518 (784)
.....+.+.++...++. ++ ++.+.+|+..+.. ....+.+|.+.|++++|+||
T Consensus 19 g~~~~~~~spdg~~l~~-~~-~~~v~l~~~~~~~--------------------------~~~~~~~h~~~v~~~~~spd 70 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQY-CN-GTSVYTVPVGSLT--------------------------DTEIYTEHSHQTTVAKTSPS 70 (611)
T ss_dssp TCCCCCEECTTSSEEEE-EE-TTEEEEEETTCSS--------------------------CCEEECCCSSCEEEEEECTT
T ss_pred CceeEEeeCCCCCEEEe-CC-CCEEEEecCCCcc--------------------------cCeEecCCCCceEEEEECCC
Confidence 33445666677666654 54 5788888663221 34567889999999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCC--ceeeecCCCCCCeEEEEEccCCCEEEEEeCC----CeEEEEcCCCCcceeeeccCCC
Q 047260 519 GKLLASSGHDRKVVLWNMDTL--QTESTPEDHKSVVTDVRFRPNSSQLATASVD----KSVRLWDAANPNFCSQAYTGHS 592 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~--~~~~~l~~h~~~It~i~fspdg~~Latgs~D----g~I~IWdl~~~~~~~~~~~~h~ 592 (784)
|++||+|+.|++|+|||+.++ .....+..|.+.|.+++|+|++++|++++.+ +.|++||... ....+.+|.
T Consensus 71 g~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~---~~~~l~gh~ 147 (611)
T 1nr0_A 71 GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT---SNGNLTGQA 147 (611)
T ss_dssp SSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC---BCBCCCCCS
T ss_pred CcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC---CcceecCCC
Confidence 999999999999999999754 3455778899999999999999999999875 4788998543 456678999
Q ss_pred CCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE
Q 047260 593 SPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS 669 (784)
Q Consensus 593 ~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~ 669 (784)
..|.+++|+|++..+|++++.|+.|++||..+.++...+. ..|.+++|+|++.+|++++.|+.|++||+.+++.+..
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV 227 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeee
Confidence 9999999999998889999999999999999887766554 5789999999999999999999999999999998888
Q ss_pred Ee-------CCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEE-------------------------------
Q 047260 670 LQ-------GHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQE------------------------------- 710 (784)
Q Consensus 670 l~-------~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~------------------------------- 710 (784)
+. +|...|.+++|+|++++|++++.| +|+|||+.+++++.+
T Consensus 228 ~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~ 307 (611)
T 1nr0_A 228 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 307 (611)
T ss_dssp CBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEE
T ss_pred eccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEE
Confidence 84 799999999999999999999966 999999998766543
Q ss_pred ------------eccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEe--cccCCceEEEEEeCCCCEEEEEEC
Q 047260 711 ------------LSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTI--AAHENIISALAQSPVTGMVASASH 776 (784)
Q Consensus 711 ------------l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~ 776 (784)
+.+|...|.+++|+|++++|++++.|++|++||+.++..... ..|...|.+++|++++ .|++++.
T Consensus 308 ~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~ 386 (611)
T 1nr0_A 308 FVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSW 386 (611)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEET
T ss_pred EEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC-cEEEEEc
Confidence 346788999999999999999999999999999999887754 4799999999999765 7889999
Q ss_pred CCcEEEeC
Q 047260 777 DSSVKLWK 784 (784)
Q Consensus 777 DG~V~IWd 784 (784)
|+.|++|+
T Consensus 387 d~~v~~w~ 394 (611)
T 1nr0_A 387 DDHLKVVP 394 (611)
T ss_dssp TTEEEEEC
T ss_pred CCceEEee
Confidence 99999996
No 18
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=328.99 Aligned_cols=285 Identities=16% Similarity=0.280 Sum_probs=256.3
Q ss_pred ceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q 047260 496 TFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRL 575 (784)
Q Consensus 496 ~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~I 575 (784)
.......+.+|.+.|++++|+|++++|++|+.||.|+|||+.+++.+..+..|...|++++|+|++++|++++.||.|++
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 34456678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCe--------------eEEeecC--C
Q 047260 576 WDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDND-----NEIQYWSINPFL--------------CTHITKG--G 634 (784)
Q Consensus 576 Wdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d-----g~I~iwDl~~~~--------------~~~~~~~--~ 634 (784)
||+.+++ ....+. +...|.+++|+|++. ++++++.+ +.|++||++... .+..+.. .
T Consensus 101 wd~~~~~-~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 101 WDVSNGQ-CVATWK-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp EETTTCC-EEEEEE-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred EECCCCc-EEEEee-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 9999877 444444 888999999999987 56666667 999999986432 1122223 7
Q ss_pred eeEEEEecCCCEEEEEECCCcEEEEECCC-CeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEec
Q 047260 635 TAQVRFQPRIGQLLAAASDKVVSIFDIET-DRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELS 712 (784)
Q Consensus 635 v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t-~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~ 712 (784)
+.+++|+|++..|++++.||.|++||+++ .+.+..+..|...|.+++|+|++.+|++++.+ .|++||+++++++..+.
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 89999999999999999999999999999 78899999999999999999999999999855 99999999999998887
Q ss_pred cCCCceEEEEEecCCCEEEEEECCC--------------eEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECC
Q 047260 713 SNGNQFHSCVFHPSYSTLLVVGGIS--------------SLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHD 777 (784)
Q Consensus 713 ~~~~~I~sl~fspdg~~L~s~s~dg--------------~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~D 777 (784)
+...+.+++|+|++.++++++.++ .|++||+.+++.+ .+..|...|++++|+|++++|++++.|
T Consensus 258 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 258 -TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp -CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred -CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCC
Confidence 668899999999999999999988 8999999998877 677899999999999999999999999
Q ss_pred CcEEEeC
Q 047260 778 SSVKLWK 784 (784)
Q Consensus 778 G~V~IWd 784 (784)
|.|+|||
T Consensus 337 g~v~iw~ 343 (369)
T 3zwl_B 337 GFIRLHH 343 (369)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 9999996
No 19
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-38 Score=352.01 Aligned_cols=319 Identities=15% Similarity=0.210 Sum_probs=270.8
Q ss_pred cccccccCCCceEecc----------ccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceE
Q 047260 442 SASNLLEDIDRFADVG----------SIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVT 511 (784)
Q Consensus 442 ss~~~~~~~~~ll~~g----------S~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~ 511 (784)
.+..+.++...++.+| +.|+.+++|+....... ..+.. ..|...|+
T Consensus 16 ~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~-----------------------~~~~~-~~~~~~v~ 71 (416)
T 2pm9_A 16 ATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE-----------------------KPIAS-LQVDSKFN 71 (416)
T ss_dssp CBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC-----------------------SCSCC-CCCSSCEE
T ss_pred ceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC-----------------------cEEEE-EecCCceE
Confidence 4455667666677777 88999999977443210 01111 24888999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCC----CceeeecCCCCCCeEEEEEccC-CCEEEEEeCCCeEEEEcCCCCc----
Q 047260 512 CCHFSSDGKLLASSGHDRKVVLWNMDT----LQTESTPEDHKSVVTDVRFRPN-SSQLATASVDKSVRLWDAANPN---- 582 (784)
Q Consensus 512 ~l~fspdg~~Lasgs~Dg~I~IWd~~t----~~~~~~l~~h~~~It~i~fspd-g~~Latgs~Dg~I~IWdl~~~~---- 582 (784)
+++|+|++++|++|+.||.|+|||+.+ .+.+..+..|...|++++|+|+ +++|++++.|+.|++||+.+..
T Consensus 72 ~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 72 DLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS 151 (416)
T ss_dssp EEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT
T ss_pred EEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccc
Confidence 999999999999999999999999987 4588888999999999999998 8999999999999999998765
Q ss_pred --cee--eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee---------cCCeeEEEEecCC-CEEE
Q 047260 583 --FCS--QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT---------KGGTAQVRFQPRI-GQLL 648 (784)
Q Consensus 583 --~~~--~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~---------~~~v~~v~fsp~~-~~Ll 648 (784)
... .....|...|.+++|+|++..++++++.|+.|++||+++.+.+..+ ...+.+++|+|++ ..++
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred cccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 222 2346789999999999997779999999999999999988776655 3558999999997 5788
Q ss_pred EEECCC---cEEEEECCCC-eEEEEEe-CCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEE
Q 047260 649 AAASDK---VVSIFDIETD-RQTHSLQ-GHAELVNYICWDT-NGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSC 721 (784)
Q Consensus 649 ~~s~Dg---~I~IwDl~t~-~~i~~l~-~h~~~V~sl~~sp-dg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl 721 (784)
+++.|+ .|++||++++ .++..+. +|...|.+++|+| ++.+|++++.+ .|++||+++++++..+..|...|.++
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~ 311 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKT 311 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCE
T ss_pred EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEE
Confidence 888888 9999999986 6777777 8999999999999 89999999855 99999999999999999999999999
Q ss_pred EEecCC-CEEEEEECCCeEEEEECCCCceEE-ec-----------------------------------ccCCceEEEEE
Q 047260 722 VFHPSY-STLLVVGGISSLELWNMAENKSMT-IA-----------------------------------AHENIISALAQ 764 (784)
Q Consensus 722 ~fspdg-~~L~s~s~dg~I~Iwdl~~~~~~~-~~-----------------------------------~h~~~V~slaf 764 (784)
+|+|++ .+|++++.|+.|++||+.+..... .. .|...|.+++|
T Consensus 312 ~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (416)
T 2pm9_A 312 KFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHW 391 (416)
T ss_dssp EECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEE
T ss_pred EECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEE
Confidence 999999 899999999999999998765321 10 16678889999
Q ss_pred eCCCCEEEEEECCCcEEEeC
Q 047260 765 SPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 765 spdg~~LaSgs~DG~V~IWd 784 (784)
+|+|++|++++.||.|+|||
T Consensus 392 s~dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 392 AFGGKLVQITPDGKGVSITN 411 (416)
T ss_dssp ETTTEEECBCTTSSCBCCBC
T ss_pred eeCCeEEEEeCCCCeEEEEE
Confidence 99999999999999999997
No 20
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-37 Score=347.88 Aligned_cols=280 Identities=21% Similarity=0.395 Sum_probs=250.7
Q ss_pred CCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEc
Q 047260 437 TGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFS 516 (784)
Q Consensus 437 ~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fs 516 (784)
+...+.++.+.++.. ++.+|+.|++|++|+..... .+..+.+|.+.|++++|+
T Consensus 107 h~~~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~~~--------------------------~~~~l~~h~~~V~~v~~~ 159 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGD--------------------------FERTLKGHTDSVQDISFD 159 (410)
T ss_dssp CSSCEEEEEECSSSS-EEEEEESSSCEEEEETTTCC--------------------------CCEEECCCSSCEEEEEEC
T ss_pred cCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc--------------------------EEEEEeccCCcEEEEEEc
Confidence 334466666766654 55579999999999764322 235678899999999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeE
Q 047260 517 SDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIM 596 (784)
Q Consensus 517 pdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~ 596 (784)
|++++|++|+.|++|+|||+.+++.+..+.+|...|++++|+|++++|++|+.|++|++||+.++. +...+.+|...|.
T Consensus 160 ~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~h~~~v~ 238 (410)
T 1vyh_C 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVR 238 (410)
T ss_dssp TTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-EEEEEeCCCccEE
Confidence 999999999999999999999999999999999999999999999999999999999999999876 6778889999999
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee---cCCeeEEEEecC--------------------CCEEEEEECC
Q 047260 597 SLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT---KGGTAQVRFQPR--------------------IGQLLAAASD 653 (784)
Q Consensus 597 sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~---~~~v~~v~fsp~--------------------~~~Ll~~s~D 653 (784)
++.|++++. ++++|+.|+.|++||+++..+...+ ...+.+++|+|+ +.+|++++.|
T Consensus 239 ~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D 317 (410)
T 1vyh_C 239 MVRPNQDGT-LIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317 (410)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT
T ss_pred EEEECCCCC-EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC
Confidence 999999987 8889999999999999987776554 467899999996 5689999999
Q ss_pred CcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEE
Q 047260 654 KVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLV 732 (784)
Q Consensus 654 g~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s 732 (784)
+.|++||++++.++..+.+|...|.+++|+|++.+|+++++| .|+|||+.+++++.++..|...|.+++|+|++.+|++
T Consensus 318 ~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s 397 (410)
T 1vyh_C 318 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 397 (410)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEE
T ss_pred CeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEE
Confidence 999999999999999999999999999999999999999966 9999999999999999999999999999999999999
Q ss_pred EECCCeEEEEECC
Q 047260 733 VGGISSLELWNMA 745 (784)
Q Consensus 733 ~s~dg~I~Iwdl~ 745 (784)
++.|++|+||+++
T Consensus 398 gs~D~~i~vW~~r 410 (410)
T 1vyh_C 398 GSVDQTVKVWECR 410 (410)
T ss_dssp EETTSEEEEEC--
T ss_pred EeCCCcEEEEeCC
Confidence 9999999999863
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=331.75 Aligned_cols=290 Identities=17% Similarity=0.254 Sum_probs=256.6
Q ss_pred eeecCCCCCCcccccccccC---CCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecC
Q 047260 430 MMNGSEGTGSLASASNLLED---IDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSR 506 (784)
Q Consensus 430 ~~~g~~~~~~~~ss~~~~~~---~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H 506 (784)
+.....++...++++.+.++ ...++.+|+.|++|++|+..... ......+.+|
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~------------------------~~~~~~l~gh 79 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER------------------------LDLQWSLEGH 79 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE------------------------EEEEEEECCC
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC------------------------eeeeeeeccC
Confidence 33444566666777777654 34567789999999999874321 1234567899
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceee
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~ 586 (784)
...|.+++|++++.++++++.|++|+|||+.+++.+..+..|...+.+++|+|++++|++++.||.|++||+++++ ...
T Consensus 80 ~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~-~~~ 158 (321)
T 3ow8_A 80 QLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK-KEY 158 (321)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS-EEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc-eeE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999876 556
Q ss_pred eccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCC
Q 047260 587 AYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIET 663 (784)
Q Consensus 587 ~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t 663 (784)
.+..|...|.+++|+|++. +|++++.|+.|++||+++.+.+..+. ..+.+++|+|++.+|++++.|+.|++||+++
T Consensus 159 ~~~~~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 159 SLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp EEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred EecCCCceEEEEEECCCCC-EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 6778889999999999987 78889999999999999988876655 5789999999999999999999999999999
Q ss_pred CeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEE
Q 047260 664 DRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELW 742 (784)
Q Consensus 664 ~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iw 742 (784)
++.+..+.+|...|.+++|+|++.+|++++.| .|+|||+.+++++.++..|...|.+++|+|++.+|++++.|+.|+||
T Consensus 238 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 238 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 99999999999999999999999999999966 99999999999999999999999999999999999999999999999
Q ss_pred ECC
Q 047260 743 NMA 745 (784)
Q Consensus 743 dl~ 745 (784)
|+.
T Consensus 318 d~p 320 (321)
T 3ow8_A 318 DCP 320 (321)
T ss_dssp ECC
T ss_pred eCC
Confidence 963
No 22
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-37 Score=340.89 Aligned_cols=328 Identities=14% Similarity=0.203 Sum_probs=270.2
Q ss_pred cccccccccCCCceEeccccCCcceeEEe----ecCCCCcc--eeccccCCCCccCCCCCCcceeEEeEeecCCCceEEE
Q 047260 440 LASASNLLEDIDRFADVGSIDENMESLLS----HDGGDGRE--LYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCC 513 (784)
Q Consensus 440 ~~ss~~~~~~~~~ll~~gS~D~~v~~~~~----~~~~~~r~--l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l 513 (784)
.+.+..+.++...++++|+.|+.+++|+. ..+..... ....+. + .+.......+|.+.|+++
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~~v~~~ 114 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELR----H--------PFALSASSGKTTNQVTCL 114 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEE----C--------CCCCC------CBCEEEE
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccc----c--------cccccccccCCCCceEEE
Confidence 45566777777647778999999999988 33220000 000000 0 000001223478899999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCC
Q 047260 514 HFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSS 593 (784)
Q Consensus 514 ~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~ 593 (784)
+|+|++++|++|+.||.|+||| .+++.+..+..|...|++++|+|++++|++++.|+.|++||+.++. ....+..+..
T Consensus 115 ~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~ 192 (425)
T 1r5m_A 115 AWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT-VMQHFELKET 192 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE-EEEEECCC--
T ss_pred EEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc-EEEEeecccc
Confidence 9999999999999999999999 6678888999999999999999999999999999999999998876 5555666666
Q ss_pred C---------------eEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe---ecCCeeEEEEecCCCEEEEEECCCc
Q 047260 594 P---------------IMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI---TKGGTAQVRFQPRIGQLLAAASDKV 655 (784)
Q Consensus 594 ~---------------V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~---~~~~v~~v~fsp~~~~Ll~~s~Dg~ 655 (784)
. +.+++|++++ .+++++.++.|++||++....+.. +...+.+++|+|++.+|++++.|+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 270 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT 270 (425)
T ss_dssp -------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred CccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCE
Confidence 5 9999999875 578889999999999997655544 4578899999999999999999999
Q ss_pred EEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEE
Q 047260 656 VSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 656 I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s 734 (784)
|++||+++++.+..+..|...|.+++|+|++ +|++++.+ .|++||+++++++..+..|...|.+++|+|++.+|++++
T Consensus 271 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp EEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence 9999999999999999999999999999999 77777755 999999999999999999999999999999999999999
Q ss_pred CCCeEEEEECCCCc--------------------eE-EecccCC--ceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 735 GISSLELWNMAENK--------------------SM-TIAAHEN--IISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 735 ~dg~I~Iwdl~~~~--------------------~~-~~~~h~~--~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.||.|++||+.++. .+ .+..|.. .|++++|+|++++|++++.||.|+|||
T Consensus 350 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 350 MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVA 422 (425)
T ss_dssp TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEE
T ss_pred CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEe
Confidence 99999999998877 44 6677866 999999999999999999999999996
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.5e-36 Score=324.66 Aligned_cols=284 Identities=18% Similarity=0.369 Sum_probs=246.1
Q ss_pred eeEEeEeecCCCceEEEEEcCC-CCEEEEEeCCCeEEEEECCCCc-----eeeecCCCCCCeEEEEEccCCCEEEEEeCC
Q 047260 497 FCEVGCIRSRNSKVTCCHFSSD-GKLLASSGHDRKVVLWNMDTLQ-----TESTPEDHKSVVTDVRFRPNSSQLATASVD 570 (784)
Q Consensus 497 ~~~i~~l~~H~~~V~~l~fspd-g~~Lasgs~Dg~I~IWd~~t~~-----~~~~l~~h~~~It~i~fspdg~~Latgs~D 570 (784)
+....+|++|.+.|++|+|+|+ +++||||+.|++|+|||+.+.+ ....+.+|...|++++|+|++++|++++.|
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 3456689999999999999997 6899999999999999987643 456788999999999999999999999999
Q ss_pred CeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe----ecCCeeEEEEecCC--
Q 047260 571 KSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI----TKGGTAQVRFQPRI-- 644 (784)
Q Consensus 571 g~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~----~~~~v~~v~fsp~~-- 644 (784)
+.|++|+..... .......+...+..+.+++++. ++++++.|+.+++||+........ +...+..++|++++
T Consensus 108 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 108 GTLRLWDLTTGT-TTRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp SEEEEEETTTTE-EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred ccceEEeecccc-eeeeecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 999999998866 5555667788899999999876 677899999999999986554433 23677888888765
Q ss_pred CEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEE
Q 047260 645 GQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVF 723 (784)
Q Consensus 645 ~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~f 723 (784)
..+++++.|+.|++||+++++.+..+.+|...|++++|+|++++|++++.| .|+|||+++.+++..+..+ ..|.++.|
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~ 264 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCF 264 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeec
Confidence 467788899999999999999999999999999999999999999999865 9999999999999888765 67999999
Q ss_pred ecCCCEEEEEECCCeEEEEECCCCceE----------EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 724 HPSYSTLLVVGGISSLELWNMAENKSM----------TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 724 spdg~~L~s~s~dg~I~Iwdl~~~~~~----------~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+|++. +++++.|+.|++||+.++..+ ....|...|++++|+|++++|++|+.||.|+|||
T Consensus 265 ~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 265 SPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp CSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 99875 667778999999999987654 2246889999999999999999999999999997
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.9e-36 Score=319.12 Aligned_cols=278 Identities=15% Similarity=0.239 Sum_probs=248.9
Q ss_pred eecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeec-----CCCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 503 IRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTP-----EDHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 503 l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l-----~~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
..+|.+.|++++|+|++++|++++ ||.|+|||+.++.....+ ..|...|++++|+|++++|++++.|+.|++||
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 347999999999999999999998 999999999876543333 27999999999999999999999999999999
Q ss_pred CCCCcc-eeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee---cCCeeEEEEecCCCEEEEEECC
Q 047260 578 AANPNF-CSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT---KGGTAQVRFQPRIGQLLAAASD 653 (784)
Q Consensus 578 l~~~~~-~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~---~~~v~~v~fsp~~~~Ll~~s~D 653 (784)
+++++. ....+..|...|.+++|+|++. ++++++.|+.|++||+++.+....+ ...+.+++|+|++..+++++.|
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 126 LAAPTPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCcceeeecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence 988653 3456678999999999999876 7778889999999999988776654 4678999999999999999999
Q ss_pred CcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEE
Q 047260 654 KVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLV 732 (784)
Q Consensus 654 g~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s 732 (784)
+.|++||+++++.+..+. +...+.+++|+|++.+|++++.+ .|++||+++++.. .+..|...|.+++|+|++++|++
T Consensus 205 g~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp SEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEE
T ss_pred CcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEE
Confidence 999999999998888775 78899999999999999999855 9999999988754 67788899999999999999999
Q ss_pred EECCCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 733 VGGISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 733 ~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
++.||.|++||+.+++.+....|...|.+++|+|++++|++++.||.|++||
T Consensus 283 ~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 283 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 9999999999999999887778999999999999999999999999999996
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.3e-36 Score=346.96 Aligned_cols=281 Identities=28% Similarity=0.469 Sum_probs=253.0
Q ss_pred eEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 498 CEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 498 ~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
..+..+.+|...|++++|+|++++|++++.|+.|++||.. ++.+..+.+|...|++++|+|++++|++++.|++|++||
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~ 331 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 331 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 4567788999999999999999999999999999999975 677788899999999999999999999999999999999
Q ss_pred CCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee--EEeecCCeeEEEEecCCCEEEEEECCCc
Q 047260 578 AANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC--THITKGGTAQVRFQPRIGQLLAAASDKV 655 (784)
Q Consensus 578 l~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~--~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~ 655 (784)
+... ....+.+|...|.+++|+|++. ++++++.|+.|++||...... +..+...+.+++|+|++.+|++++.|+.
T Consensus 332 ~~~~--~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~ 408 (577)
T 2ymu_A 332 RNGQ--HLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 408 (577)
T ss_dssp TTSC--EEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred CCCC--eeEEEeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCE
Confidence 8754 3556778999999999999987 778899999999999764322 2334578999999999999999999999
Q ss_pred EEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEE
Q 047260 656 VSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 656 I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s 734 (784)
|++||. +++.+..+.+|...|.+++|+|++++|++++.+ .|++||. +++.+..+..|...|.+++|+|++++|++++
T Consensus 409 v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~ 486 (577)
T 2ymu_A 409 VKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 486 (577)
T ss_dssp EEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEE
T ss_pred EEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 999995 577888899999999999999999999999866 9999996 5778889999999999999999999999999
Q ss_pred CCCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 735 GISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 735 ~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.|+.|++||........+.+|...|++++|+|++++|++++.||.|+|||
T Consensus 487 ~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 487 DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp TTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 99999999976555558889999999999999999999999999999997
No 26
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.9e-37 Score=336.34 Aligned_cols=284 Identities=15% Similarity=0.189 Sum_probs=252.5
Q ss_pred eEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc------eeeecCCCCCCeEEEEEccC----C---CEE
Q 047260 498 CEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ------TESTPEDHKSVVTDVRFRPN----S---SQL 564 (784)
Q Consensus 498 ~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~------~~~~l~~h~~~It~i~fspd----g---~~L 564 (784)
.....+.+|.+.|++++|+| ++|++|+.||.|+|||+.+++ .+..+..|...|++++|+|+ + ++|
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 45677889999999999998 799999999999999999887 77888899999999999999 9 999
Q ss_pred EEEeCCCeEEEEcCCCCcc----eeeeccCC-----CCCeEEEEEc----CCCCcEEEEEeCCCeEEEEeCCC------C
Q 047260 565 ATASVDKSVRLWDAANPNF----CSQAYTGH-----SSPIMSLDFH----PKKTDLFCFCDNDNEIQYWSINP------F 625 (784)
Q Consensus 565 atgs~Dg~I~IWdl~~~~~----~~~~~~~h-----~~~V~sl~~s----p~~~~ll~sgs~dg~I~iwDl~~------~ 625 (784)
++++.||.|++||+.+... ....+..| ...|.+++|+ |++..+|++++.||.|++||++. .
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999999987662 15666777 5899999999 88874388899999999999987 4
Q ss_pred eeEE-----e----------ecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeC---C---CCCEEEEEEcC
Q 047260 626 LCTH-----I----------TKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQG---H---AELVNYICWDT 684 (784)
Q Consensus 626 ~~~~-----~----------~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~---h---~~~V~sl~~sp 684 (784)
..+. . +...+.+++|+|++ .+++++.|+.|++||+++++.+..+.. | ...|.+++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 3332 2 35778999999999 999999999999999999999999998 8 99999999999
Q ss_pred CCCEEEEEeC----CeEEEEeCCCCceEEEecc-------------CCCceEEEEEecCCCEEEEEECCCeEEEEECCCC
Q 047260 685 NGDYLASVSQ----NLVKVWSMASGECIQELSS-------------NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAEN 747 (784)
Q Consensus 685 dg~~Lasgsd----d~I~IwDl~t~~~i~~l~~-------------~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~ 747 (784)
++.+|++++. +.|++||+++++++..+.. |...|.+++|+|++.+|++++.|+.|++||+.++
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999884 5999999999999999998 8999999999999999999999999999999998
Q ss_pred ceE-Eec------cc---------------CCceEEEEEeCCC----------CEEEEEECCCcEEEeC
Q 047260 748 KSM-TIA------AH---------------ENIISALAQSPVT----------GMVASASHDSSVKLWK 784 (784)
Q Consensus 748 ~~~-~~~------~h---------------~~~V~slafspdg----------~~LaSgs~DG~V~IWd 784 (784)
+.+ .+. .| ...|++++|+|++ ++|++++.||.|+|||
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 324 ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 877 555 67 8999999999998 7999999999999996
No 27
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.5e-36 Score=322.86 Aligned_cols=291 Identities=18% Similarity=0.267 Sum_probs=253.9
Q ss_pred cCCCCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEE
Q 047260 433 GSEGTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTC 512 (784)
Q Consensus 433 g~~~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~ 512 (784)
...++...+.+..+.++...++.+|+.|+++++|+...... .....+..+.+|...|.+
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---------------------~~~~~~~~~~~h~~~v~~ 70 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---------------------KFGVPVRSFKGHSHIVQD 70 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---------------------EEEEEEEEEECCSSCEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---------------------cccccceEEeCCcccEEE
Confidence 34566666777788777777888899999999998754320 112356788999999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCC
Q 047260 513 CHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHS 592 (784)
Q Consensus 513 l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~ 592 (784)
++|+|++++|++|+.|++|+|||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||++.. +...+.+|.
T Consensus 71 ~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~ 148 (319)
T 3frx_A 71 CTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--CLATLLGHN 148 (319)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--EEEEECCCS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eEEEEeccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999743 567778999
Q ss_pred CCeEEEEEcCCC-----CcEEEEEeCCCeEEEEeCCCCeeEEee---cCCeeEEEEecCCCEEEEEECCCcEEEEECCCC
Q 047260 593 SPIMSLDFHPKK-----TDLFCFCDNDNEIQYWSINPFLCTHIT---KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETD 664 (784)
Q Consensus 593 ~~V~sl~~sp~~-----~~ll~sgs~dg~I~iwDl~~~~~~~~~---~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~ 664 (784)
..|.++.|.|.. ..++++++.|+.|++||++.......+ ...+.+++|+|++.+|++++.|+.|++||++++
T Consensus 149 ~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 999999999864 347899999999999999987766554 467999999999999999999999999999999
Q ss_pred eEEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEecc--------CCCceEEEEEecCCCEEEEEECC
Q 047260 665 RQTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSS--------NGNQFHSCVFHPSYSTLLVVGGI 736 (784)
Q Consensus 665 ~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~--------~~~~I~sl~fspdg~~L~s~s~d 736 (784)
+.+..+.. ...|.+++|+|++.+|++++++.+++|++.....+..+.. +...+.+++|+|++++|++++.|
T Consensus 229 ~~~~~~~~-~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D 307 (319)
T 3frx_A 229 KAMYTLSA-QDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD 307 (319)
T ss_dssp EEEEEEEC-CSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEecC-CCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC
Confidence 99988875 5689999999999999999999999999998887777643 34578999999999999999999
Q ss_pred CeEEEEECCCC
Q 047260 737 SSLELWNMAEN 747 (784)
Q Consensus 737 g~I~Iwdl~~~ 747 (784)
+.|+|||+.++
T Consensus 308 g~i~vWd~~t~ 318 (319)
T 3frx_A 308 NVIRVWQVMTA 318 (319)
T ss_dssp SCEEEEEEEEC
T ss_pred ceEEEEEEeec
Confidence 99999998654
No 28
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.2e-36 Score=322.81 Aligned_cols=281 Identities=17% Similarity=0.262 Sum_probs=244.6
Q ss_pred CCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcC
Q 047260 438 GSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSS 517 (784)
Q Consensus 438 ~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fsp 517 (784)
...+.++.|.++...++ +|+.|+.|++|+.... .++..+..|...|.+++|+|
T Consensus 13 ~~~V~~~~fsp~~~~l~-s~~~dg~v~lWd~~~~--------------------------~~~~~~~~~~~~v~~~~~~~ 65 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVL-TTLYSGRVELWNYETQ--------------------------VEVRSIQVTETPVRAGKFIA 65 (304)
T ss_dssp CSCEEEEEECSSSSEEE-EEETTSEEEEEETTTT--------------------------EEEEEEECCSSCEEEEEEEG
T ss_pred CCceEEEEECCCCCEEE-EEcCCCcEEEEECCCC--------------------------ceeEEeeccCCcEEEEEEeC
Confidence 34467777877765554 6889999999976321 24567788999999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEE
Q 047260 518 DGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMS 597 (784)
Q Consensus 518 dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~s 597 (784)
++++|++|+.|+.|+|||+.+++.+..+.+|...|++++|+|++++|++|+.|++|++||++++..+...+.+|...|.+
T Consensus 66 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~ 145 (304)
T 2ynn_A 66 RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (304)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEE
T ss_pred CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999876677788899999999
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe----ecCCeeEEEEec--CCCEEEEEECCCcEEEEECCCCeEEEEEe
Q 047260 598 LDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI----TKGGTAQVRFQP--RIGQLLAAASDKVVSIFDIETDRQTHSLQ 671 (784)
Q Consensus 598 l~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~----~~~~v~~v~fsp--~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~ 671 (784)
++|+|.+..+|++|+.|+.|++||++....... +...+..+.|.| ++.+|++++.|+.|++||+++++++..+.
T Consensus 146 v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (304)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC
Confidence 999997777999999999999999986544332 235678888876 67799999999999999999999999999
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCC--EEEEEECCCeEEEEECCC
Q 047260 672 GHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYS--TLLVVGGISSLELWNMAE 746 (784)
Q Consensus 672 ~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~--~L~s~s~dg~I~Iwdl~~ 746 (784)
+|...|.+++|+|++.+|++++.| .|+|||+.+++++.++..+...+.+++|+|++. ++++++ ++.+.+|++..
T Consensus 226 ~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGN 302 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEE-TTEEEEEECC-
T ss_pred CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEec-CCceEEEEecc
Confidence 999999999999999999999966 999999999999999999999999999999885 355554 55688888765
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.4e-36 Score=356.53 Aligned_cols=283 Identities=21% Similarity=0.397 Sum_probs=245.2
Q ss_pred eEEeEeecCCCceEEEEEcCCC-CEEEEEeCCCeEEEEECCCC-----ceeeecCCCCCCeEEEEEccCCCEEEEEeCCC
Q 047260 498 CEVGCIRSRNSKVTCCHFSSDG-KLLASSGHDRKVVLWNMDTL-----QTESTPEDHKSVVTDVRFRPNSSQLATASVDK 571 (784)
Q Consensus 498 ~~i~~l~~H~~~V~~l~fspdg-~~Lasgs~Dg~I~IWd~~t~-----~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg 571 (784)
.....+++|.+.|+||+|++++ ++|++|+.|++|+|||+.+. .....+.+|...|++++|+|++++|++|+.||
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 4456789999999999999864 79999999999999999753 34567889999999999999999999999999
Q ss_pred eEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe------ecCCeeEEEEecCC-
Q 047260 572 SVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI------TKGGTAQVRFQPRI- 644 (784)
Q Consensus 572 ~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~------~~~~v~~v~fsp~~- 644 (784)
+|+|||+.++. ....+.+|...|.+++|+|++. +|++++.|+.|++||+........ +...+.+++|+|++
T Consensus 453 ~v~vwd~~~~~-~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 453 ELRLWDLAAGV-STRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp EEEEEETTTTE-EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred cEEEEECCCCc-ceeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 99999999866 6677889999999999999987 678899999999999876544333 33568999999987
Q ss_pred -CEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEE
Q 047260 645 -GQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCV 722 (784)
Q Consensus 645 -~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~ 722 (784)
..+++++.|+.|++||+++++....+.+|...|++++|+|++++|++++.| .|+|||+++++++..+..+ ..|.+++
T Consensus 531 ~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 609 (694)
T 3dm0_A 531 QPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALC 609 (694)
T ss_dssp SCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEEE
T ss_pred cceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcEEEEE
Confidence 579999999999999999999999999999999999999999999999965 9999999999998887654 6799999
Q ss_pred EecCCCEEEEEECCCeEEEEECCCCceEE-ecc-------------------cCCceEEEEEeCCCCEEEEEECCCcEEE
Q 047260 723 FHPSYSTLLVVGGISSLELWNMAENKSMT-IAA-------------------HENIISALAQSPVTGMVASASHDSSVKL 782 (784)
Q Consensus 723 fspdg~~L~s~s~dg~I~Iwdl~~~~~~~-~~~-------------------h~~~V~slafspdg~~LaSgs~DG~V~I 782 (784)
|+|++.++++++ ++.|+|||+.++..+. +.. +...|++++|+|++++|++|+.||.|+|
T Consensus 610 ~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~i 688 (694)
T 3dm0_A 610 FSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRV 688 (694)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEE
Confidence 999988666654 5669999999987662 211 1124789999999999999999999999
Q ss_pred eC
Q 047260 783 WK 784 (784)
Q Consensus 783 Wd 784 (784)
||
T Consensus 689 W~ 690 (694)
T 3dm0_A 689 WG 690 (694)
T ss_dssp EE
T ss_pred Ee
Confidence 96
No 30
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=330.13 Aligned_cols=289 Identities=17% Similarity=0.225 Sum_probs=230.9
Q ss_pred ccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCC
Q 047260 441 ASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGK 520 (784)
Q Consensus 441 ~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~ 520 (784)
..+..|.++...++ +++ |+++++|+..-. .+.. ........ .......|...|.+++|+|++
T Consensus 33 v~~~~fs~dG~~l~-~~s-d~~~r~Wd~~~~-----~~~~------~~~~~~~~----~~~~~~~~~~~v~~~~~s~d~- 94 (344)
T 4gqb_B 33 LEAARYRSDGALLL-GAS-SLSGRCWAGSLW-----LFKD------PCAAPNEG----FCSAGVQTEAGVADLTWVGER- 94 (344)
T ss_dssp EEEEEECTTSCEEE-EEE-CCSSSCCCEEEE-----EESS------GGGTTCGG----GCSEEEEESSCEEEEEEETTT-
T ss_pred EEEEEECCCCCEEE-EEe-CCceEEeeceee-----eecc------ccccCCcc----eeeeeeccCCCEEEEEEeCCC-
Confidence 45566767665444 454 888898853210 0000 00001111 112223477889999999985
Q ss_pred EEEEEeCCCeEEEEECCCCceeee----cCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeE
Q 047260 521 LLASSGHDRKVVLWNMDTLQTEST----PEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIM 596 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~~~~~----l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~ 596 (784)
.|++|+.||+|+|||+.+++.+.. +.+|...|++|+|+|++++|++|+.|++|+|||+++++ +...+.+|...|.
T Consensus 95 ~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~-~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 95 GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV-VLSSYRAHAAQVT 173 (344)
T ss_dssp EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEE
T ss_pred eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCcCCceE
Confidence 688999999999999998876544 34899999999999999999999999999999999876 7788899999999
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec-----CCeeEEEEecCC-CEEEEEECCCcEEEEECCCCeEEEEE
Q 047260 597 SLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK-----GGTAQVRFQPRI-GQLLAAASDKVVSIFDIETDRQTHSL 670 (784)
Q Consensus 597 sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~-----~~v~~v~fsp~~-~~Ll~~s~Dg~I~IwDl~t~~~i~~l 670 (784)
+++|++++..+|++++.|+.|++||+++.+....+. ..+.+++|+|++ .+|++++.|+.|++||+++++++..+
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~ 253 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS 253 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE
T ss_pred EEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE
Confidence 999999998899999999999999999887765543 357899999965 56778889999999999999999999
Q ss_pred eCCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCE-EEEEECCCeEEEEECCCC
Q 047260 671 QGHAELVNYICWDTNG-DYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYST-LLVVGGISSLELWNMAEN 747 (784)
Q Consensus 671 ~~h~~~V~sl~~spdg-~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~-L~s~s~dg~I~Iwdl~~~ 747 (784)
.+|...|++++|+|++ .+|+++++| +|+|||+.+++++ .+.+|...|++++|+|++.. |++++.|++|++|++.+.
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 9999999999999998 578888865 9999999998765 56799999999999999875 668899999999999875
Q ss_pred ce
Q 047260 748 KS 749 (784)
Q Consensus 748 ~~ 749 (784)
..
T Consensus 333 ~~ 334 (344)
T 4gqb_B 333 PL 334 (344)
T ss_dssp --
T ss_pred CC
Confidence 43
No 31
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.2e-36 Score=327.11 Aligned_cols=280 Identities=15% Similarity=0.215 Sum_probs=246.6
Q ss_pred eecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--eeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCC
Q 047260 503 IRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ--TESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAAN 580 (784)
Q Consensus 503 l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~--~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~ 580 (784)
+..|.+.|++++|+|++++|++++.|+.|+|||+.+++ .+..+.+|...|++++|+|++++|++++.||.|++||+++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45599999999999999999999999999999999887 8888889999999999999999999999999999999987
Q ss_pred Ccce-eeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee---EEe----ecCCeeEEEEecCCCEEEEEEC
Q 047260 581 PNFC-SQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC---THI----TKGGTAQVRFQPRIGQLLAAAS 652 (784)
Q Consensus 581 ~~~~-~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~---~~~----~~~~v~~v~fsp~~~~Ll~~s~ 652 (784)
++.. ...+..|...|.+++|+|++. ++++++.|+.|++||++.... ... +...+.+++|+|++.+|++++.
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 6522 333467899999999999986 788889999999999987541 222 3467999999999999999999
Q ss_pred CCcEEEEEC------------------CCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEecc
Q 047260 653 DKVVSIFDI------------------ETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSS 713 (784)
Q Consensus 653 Dg~I~IwDl------------------~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~ 713 (784)
|+.|++||+ ..++.+..+..|...|.+++|+|++.+|++++.+ .|++||+++++++..+..
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 999999995 4678888998999999999999999999999866 999999999999999999
Q ss_pred CCCceEEEEEecCCCEEEEEECCCeEEEEECCC--Cce---------------------------------------EEe
Q 047260 714 NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAE--NKS---------------------------------------MTI 752 (784)
Q Consensus 714 ~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~--~~~---------------------------------------~~~ 752 (784)
|...|.+++|+|++.+|+++ .|+.|++|++.+ +.. ..+
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 321 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccc
Confidence 99999999999999877766 999999999987 421 222
Q ss_pred -cccCCceEEEEEe-CCC---CEEEEEECCCcEEEeC
Q 047260 753 -AAHENIISALAQS-PVT---GMVASASHDSSVKLWK 784 (784)
Q Consensus 753 -~~h~~~V~slafs-pdg---~~LaSgs~DG~V~IWd 784 (784)
.+|...|++++|+ +++ .+|++|+.||.|+|||
T Consensus 322 ~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 322 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred cccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 3899999999976 666 8999999999999996
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-35 Score=330.64 Aligned_cols=312 Identities=13% Similarity=0.204 Sum_probs=259.5
Q ss_pred cccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCE
Q 047260 442 SASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKL 521 (784)
Q Consensus 442 ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~ 521 (784)
....+.++...++ +++.|+.+++|+....... ..+..| ..+.+..|++++++
T Consensus 60 ~~~~~s~~g~~l~-~~~~d~~v~i~d~~~~~~~--------------------------~~~~~~-~~~~~~~~~~~~~~ 111 (420)
T 3vl1_A 60 KGNTFEKVGSHLY-KARLDGHDFLFNTIIRDGS--------------------------KMLKRA-DYTAVDTAKLQMRR 111 (420)
T ss_dssp TTCEEEEEETTEE-EEEETTEEEEEECCSEETT--------------------------TTSCSC-CEEEEEEECSSSCE
T ss_pred cceeeeecCCeEE-EEEcCCcEEEEEeccccee--------------------------eEEecC-CceEEEEEecCCCE
Confidence 3566767766665 6889999999986433211 111223 34555678999999
Q ss_pred EEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEc
Q 047260 522 LASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFH 601 (784)
Q Consensus 522 Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~s 601 (784)
|++|+.||.|+|||+.+++....+..|...|++++|+|++++|++++.|+.|++||+.+++ ....+.+|...|.+++|+
T Consensus 112 l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~h~~~v~~~~~~ 190 (420)
T 3vl1_A 112 FILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS-NPRTLIGHRATVTDIAII 190 (420)
T ss_dssp EEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-CCEEEECCSSCEEEEEEE
T ss_pred EEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-CceEEcCCCCcEEEEEEc
Confidence 9999999999999999999999989999999999999999999999999999999999876 566778999999999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---------------------------CCeeEEEEecCCCEEEEEECCC
Q 047260 602 PKKTDLFCFCDNDNEIQYWSINPFLCTHITK---------------------------GGTAQVRFQPRIGQLLAAASDK 654 (784)
Q Consensus 602 p~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---------------------------~~v~~v~fsp~~~~Ll~~s~Dg 654 (784)
|++. +|++++.|+.|++||+++.+.+..+. ..+.+++|+|++.+|++++.||
T Consensus 191 ~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 269 (420)
T 3vl1_A 191 DRGR-NVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG 269 (420)
T ss_dssp TTTT-EEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS
T ss_pred CCCC-EEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC
Confidence 9977 77789999999999999888776654 2334455678899999999999
Q ss_pred cEEEEECCCCeEEEEEe-CCCCCEEEEEEcCCCC-EEEEEeCC-eEEEEeCCCCce-EEEecc-CCCceEEEEEecCCCE
Q 047260 655 VVSIFDIETDRQTHSLQ-GHAELVNYICWDTNGD-YLASVSQN-LVKVWSMASGEC-IQELSS-NGNQFHSCVFHPSYST 729 (784)
Q Consensus 655 ~I~IwDl~t~~~i~~l~-~h~~~V~sl~~spdg~-~Lasgsdd-~I~IwDl~t~~~-i~~l~~-~~~~I~sl~fspdg~~ 729 (784)
.|++||+++++.+..+. .|...|.+++|+|++. +|++++.+ .|++||+++++. +..+.. +...|.++ +.+++.+
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~ 348 (420)
T 3vl1_A 270 VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGAL 348 (420)
T ss_dssp CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEE
T ss_pred eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCE
Confidence 99999999998777775 4788999999999998 99998865 999999999754 777776 55666666 5557889
Q ss_pred EEEEECCCeEEEEECCCC----------ceEEecccCCceEEEEEeCCCC---EEEEEECCCcEEEeC
Q 047260 730 LLVVGGISSLELWNMAEN----------KSMTIAAHENIISALAQSPVTG---MVASASHDSSVKLWK 784 (784)
Q Consensus 730 L~s~s~dg~I~Iwdl~~~----------~~~~~~~h~~~V~slafspdg~---~LaSgs~DG~V~IWd 784 (784)
|++++.|+.|++||+... ....+..|.+.|.+++|+|++. .|++++.+|.+.+|+
T Consensus 349 l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 349 FVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp EEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred EEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence 999999999999998873 2235668899999999999999 788888999999995
No 33
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-35 Score=320.74 Aligned_cols=278 Identities=20% Similarity=0.309 Sum_probs=242.7
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEE
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHF 515 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~f 515 (784)
++...+.+..+.++.. ++.+|+.|+.+++|+.... ..+..+..|...|.+++|
T Consensus 53 gH~~~v~~~~~s~d~~-~l~s~s~Dg~v~iWd~~~~--------------------------~~~~~~~~~~~~v~~~~~ 105 (340)
T 1got_B 53 GHLAKIYAMHWGTDSR-LLLSASQDGKLIIWDSYTT--------------------------NKVHAIPLRSSWVMTCAY 105 (340)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTTEEEEEETTTC--------------------------CEEEEEECSSSCEEEEEE
T ss_pred CCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCC--------------------------CcceEeecCCccEEEEEE
Confidence 3444566677766654 4557999999999976322 245567789999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCC----ceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCC
Q 047260 516 SSDGKLLASSGHDRKVVLWNMDTL----QTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGH 591 (784)
Q Consensus 516 spdg~~Lasgs~Dg~I~IWd~~t~----~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h 591 (784)
+|++++|++|+.|+.|+|||+.+. .....+.+|...|.++.|++++. |++++.|++|++||++++. ....+.+|
T Consensus 106 s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~-~~~~~~~h 183 (340)
T 1got_B 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ-QTTTFTGH 183 (340)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE-EEEEECCC
T ss_pred CCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc-EEEEEcCC
Confidence 999999999999999999999865 35566789999999999998774 8999999999999999876 66778899
Q ss_pred CCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEE
Q 047260 592 SSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTH 668 (784)
Q Consensus 592 ~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~ 668 (784)
...|.+++|+|++. ++++++.|+.|++||+++..+...+. ..+.+++|+|++..|++++.|+.|++||+++++.+.
T Consensus 184 ~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 262 (340)
T 1got_B 184 TGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262 (340)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 99999999999876 88899999999999999887766554 678999999999999999999999999999998887
Q ss_pred EEeC--CCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEE
Q 047260 669 SLQG--HAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWN 743 (784)
Q Consensus 669 ~l~~--h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwd 743 (784)
.+.. +...|.+++|+|++.+|++++++ .|+|||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|+|||
T Consensus 263 ~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 7753 33579999999999999999966 999999999999999999999999999999999999999999999997
No 34
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-35 Score=309.56 Aligned_cols=280 Identities=15% Similarity=0.242 Sum_probs=246.4
Q ss_pred ceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q 047260 496 TFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRL 575 (784)
Q Consensus 496 ~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~I 575 (784)
.+..+..+.+|.+.|++++| +++++|++|+.||.|+|||+.+++....+..|...|.+++|+|++++|++++.||.|++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 34677889999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCc--ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe-eEEeecCCeeEEEEec-CCCEEEEEE
Q 047260 576 WDAANPN--FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL-CTHITKGGTAQVRFQP-RIGQLLAAA 651 (784)
Q Consensus 576 Wdl~~~~--~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~-~~~~~~~~v~~v~fsp-~~~~Ll~~s 651 (784)
|++.... .....+.+|...|.++.|. + .++++++.|+.|++||..... ....+...+.++.|.| ++..+++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 162 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTAS 162 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEE
Confidence 9987643 3456678899999999994 3 388899999999999933221 2233457888999988 889999999
Q ss_pred CCCcEEEEECCCCeEEEEEeC-CCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCE
Q 047260 652 SDKVVSIFDIETDRQTHSLQG-HAELVNYICWDTNGDYLASVS-QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYST 729 (784)
Q Consensus 652 ~Dg~I~IwDl~t~~~i~~l~~-h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~ 729 (784)
.|+.|++|| ..+....+.. |...|.+++|+|++. +++++ ++.|++||+++++++..+..|...|.+++|+|++ .
T Consensus 163 ~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 238 (313)
T 3odt_A 163 ADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-D 238 (313)
T ss_dssp TTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-C
T ss_pred CCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-C
Confidence 999999999 5567777777 899999999999999 55555 5599999999999999999999999999999999 6
Q ss_pred EEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 730 LLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 730 L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
|++++.||.|++||+.+++.. .+..|...|.+++|+|++. +++++.||.|+|||
T Consensus 239 l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 239 IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFS 293 (313)
T ss_dssp EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEE
T ss_pred EEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEe
Confidence 999999999999999999877 6678899999999999998 66799999999996
No 35
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.6e-36 Score=325.23 Aligned_cols=287 Identities=17% Similarity=0.317 Sum_probs=245.1
Q ss_pred cceeEEeEe-ecCCCceEEEEEcCC----CCEEEEEeCCCeEEEEECCCCceeeecCC-----CCCCeEEEEEccC----
Q 047260 495 FTFCEVGCI-RSRNSKVTCCHFSSD----GKLLASSGHDRKVVLWNMDTLQTESTPED-----HKSVVTDVRFRPN---- 560 (784)
Q Consensus 495 ~~~~~i~~l-~~H~~~V~~l~fspd----g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~-----h~~~It~i~fspd---- 560 (784)
+.|..+..+ .+|.+.|++++|+|+ ...+++++.++.|+|||+.+++.+..+.. |...|++++|+|+
T Consensus 5 ~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 84 (366)
T 3k26_A 5 YSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTS 84 (366)
T ss_dssp CCCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTC
T ss_pred eEEEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCC
Confidence 344444344 489999999999984 44666677778999999998777666643 6688999999998
Q ss_pred CCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee------cCC
Q 047260 561 SSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT------KGG 634 (784)
Q Consensus 561 g~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~------~~~ 634 (784)
+.+|++|+.||.|++||+.+++ ....+.+|...|.+++|+|++..+|++++.||.|++||+++.+.+..+ ...
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQ-CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCC-EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCEEEEecCCCEEEEEEchhce-EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 6799999999999999999876 667788999999999999955558999999999999999988777654 468
Q ss_pred eeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEE----------------------------eCCCCCEEEEEEcCCC
Q 047260 635 TAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSL----------------------------QGHAELVNYICWDTNG 686 (784)
Q Consensus 635 v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l----------------------------~~h~~~V~sl~~spdg 686 (784)
+.+++|+|++..|++++.|+.|++||+++++.+..+ ..|...|.+++|+ +
T Consensus 164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 999999999999999999999999999987544333 2399999999998 7
Q ss_pred CEEEEEeCC-eEEEEeCCCCce--------------EEEeccCCCceEEEEEecC--CCEEEEEECCCeEEEEECCCCce
Q 047260 687 DYLASVSQN-LVKVWSMASGEC--------------IQELSSNGNQFHSCVFHPS--YSTLLVVGGISSLELWNMAENKS 749 (784)
Q Consensus 687 ~~Lasgsdd-~I~IwDl~t~~~--------------i~~l~~~~~~I~sl~fspd--g~~L~s~s~dg~I~Iwdl~~~~~ 749 (784)
.+|++++.+ .|++||+.++.. +..+..|...|.+++|+|+ +.+|++++.||.|++||+.+++.
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 788888855 999999988644 7888889999999999999 99999999999999999998753
Q ss_pred E-----Eeccc--CCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 750 M-----TIAAH--ENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 750 ~-----~~~~h--~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
. .+..| ...|++++|+|++++|++++.||.|+|||
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 322 HKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp GGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 2 56666 79999999999999999999999999997
No 36
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.7e-35 Score=323.11 Aligned_cols=282 Identities=15% Similarity=0.255 Sum_probs=236.3
Q ss_pred ceeEEeEeecCCCceEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceeeecC--CCCCCeEEEEEcc-CCCEEEEEeCCC
Q 047260 496 TFCEVGCIRSRNSKVTCCHFSSDG-KLLASSGHDRKVVLWNMDTLQTESTPE--DHKSVVTDVRFRP-NSSQLATASVDK 571 (784)
Q Consensus 496 ~~~~i~~l~~H~~~V~~l~fspdg-~~Lasgs~Dg~I~IWd~~t~~~~~~l~--~h~~~It~i~fsp-dg~~Latgs~Dg 571 (784)
.+..+..+.+|.+.|++++|+|++ ++|++|+.||.|+|||+.+++....+. +|...|++++|+| ++++|++++.|+
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 345677889999999999999999 899999999999999999888777665 6999999999999 789999999999
Q ss_pred eEEEEcCCCCcceeeecc---CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee--EEeecCCeeEEEEecCCC-
Q 047260 572 SVRLWDAANPNFCSQAYT---GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC--THITKGGTAQVRFQPRIG- 645 (784)
Q Consensus 572 ~I~IWdl~~~~~~~~~~~---~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~--~~~~~~~v~~v~fsp~~~- 645 (784)
.|++||+.+. ....+. .|...|.+++|+|++. +|++++.|+.|++||++.... +..+...+.+++|+|++.
T Consensus 142 ~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 142 ATTLRDFSGS--VIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEEEETTSC--EEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTT
T ss_pred EEEEEECCCC--ceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCC
Confidence 9999999863 333333 3458899999999987 788899999999999964322 223457899999999999
Q ss_pred EEEEEECCCcEEEEECCC----CeEEEEEeCCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEeCCCCceEEEeccCC----
Q 047260 646 QLLAAASDKVVSIFDIET----DRQTHSLQGHAELVNYICWDT-NGDYLASVSQN-LVKVWSMASGECIQELSSNG---- 715 (784)
Q Consensus 646 ~Ll~~s~Dg~I~IwDl~t----~~~i~~l~~h~~~V~sl~~sp-dg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~---- 715 (784)
.+++++.|+.|++||+++ +..+..+ +|...|.+++|+| ++.+|++++.+ .|+|||+++++++..+..|.
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 899999999999999998 6666666 5999999999999 99999999865 99999999988776666442
Q ss_pred -------------CceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-Eecc--cCCceEEEEEeCCCCEEEEEECCCc
Q 047260 716 -------------NQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAA--HENIISALAQSPVTGMVASASHDSS 779 (784)
Q Consensus 716 -------------~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~--h~~~V~slafspdg~~LaSgs~DG~ 779 (784)
..+..++|+|++.+ +++.|+.|+|||+.+++.+ .+.. |...+.+++|+|++++|++++ ||.
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~ 374 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFN 374 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTE
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCc
Confidence 23334555666655 6668999999999998887 4544 567888889999999999997 999
Q ss_pred EEEeC
Q 047260 780 VKLWK 784 (784)
Q Consensus 780 V~IWd 784 (784)
|+|||
T Consensus 375 i~iw~ 379 (383)
T 3ei3_B 375 ILIWN 379 (383)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99996
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-35 Score=326.17 Aligned_cols=285 Identities=17% Similarity=0.242 Sum_probs=226.3
Q ss_pred CCCcccccccccCCCceEecccc------CCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCce
Q 047260 437 TGSLASASNLLEDIDRFADVGSI------DENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKV 510 (784)
Q Consensus 437 ~~~~~ss~~~~~~~~~ll~~gS~------D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V 510 (784)
+...+.++.|.+|...++. +|. |+.+++|....... .........+|...|
T Consensus 41 H~~~V~~v~fSpDG~~las-~s~d~~~~wd~~v~~~~~~~~~~----------------------~~~~~~~~~~~~~~V 97 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLA-ASSLSSRTWGGSIWVFKDPEGAP----------------------NESLCTAGVQTEAGV 97 (357)
T ss_dssp CCSEEEEEEECSSSCEEEE-EECSSSSSCCEEEEEESSCC-------------------------CGGGCSEEEECSSCE
T ss_pred ccCCEEEEEECCCCCEEEE-EcCCCCccccCeEEEEECCCCCc----------------------ceeEecccCCCCCCE
Confidence 3344667778787766664 554 44555553322210 011123345699999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCceeee----cCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceee
Q 047260 511 TCCHFSSDGKLLASSGHDRKVVLWNMDTLQTEST----PEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 511 ~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~----l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~ 586 (784)
++++|+|++. +++++.||+|+|||+.+++.... ..+|...|++++|+|++++|++|+.|++|+|||+++++ +..
T Consensus 98 ~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~-~~~ 175 (357)
T 4g56_B 98 TDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA-VLK 175 (357)
T ss_dssp EEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE-EEE
T ss_pred EEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEE
Confidence 9999999986 45678899999999988765433 34799999999999999999999999999999999876 677
Q ss_pred eccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee-----cCCeeEEEEecCC-CEEEEEECCCcEEEEE
Q 047260 587 AYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT-----KGGTAQVRFQPRI-GQLLAAASDKVVSIFD 660 (784)
Q Consensus 587 ~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~-----~~~v~~v~fsp~~-~~Ll~~s~Dg~I~IwD 660 (784)
.+.+|...|.+++|++++..++++++.|+.|++||+++.+..... ...+.+++|+|++ ..|++++.|+.|++||
T Consensus 176 ~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd 255 (357)
T 4g56_B 176 SYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVN 255 (357)
T ss_dssp EECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEE
T ss_pred EEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEE
Confidence 788999999999999999889999999999999999987655433 3568899999985 4677888999999999
Q ss_pred CCCCeEEEEEeCCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEec-CCCEEEEEECCC
Q 047260 661 IETDRQTHSLQGHAELVNYICWDTNG-DYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHP-SYSTLLVVGGIS 737 (784)
Q Consensus 661 l~t~~~i~~l~~h~~~V~sl~~spdg-~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fsp-dg~~L~s~s~dg 737 (784)
+++++.+..+.+|...|++++|+|++ ++|+++++| +|+|||+++++++..+ +|...|++++|+| ++.+|++++.|+
T Consensus 256 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 256 IKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp SSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred CCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCC
Confidence 99999999999999999999999987 578888865 9999999999887665 7899999999998 789999999999
Q ss_pred eEEEEECCCC
Q 047260 738 SLELWNMAEN 747 (784)
Q Consensus 738 ~I~Iwdl~~~ 747 (784)
+|++|++...
T Consensus 335 ~v~iW~~~~~ 344 (357)
T 4g56_B 335 KVLHHHLPSE 344 (357)
T ss_dssp CEEEEECC--
T ss_pred eEEEEECCCC
Confidence 9999999764
No 38
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=320.46 Aligned_cols=282 Identities=15% Similarity=0.185 Sum_probs=238.1
Q ss_pred eEeecCCCceEEEEEcCCCCEE-EEEeC---CCeEEEEECCCCceeeec-CCCCCCeEEEEEccC---CCEEEEEeCCCe
Q 047260 501 GCIRSRNSKVTCCHFSSDGKLL-ASSGH---DRKVVLWNMDTLQTESTP-EDHKSVVTDVRFRPN---SSQLATASVDKS 572 (784)
Q Consensus 501 ~~l~~H~~~V~~l~fspdg~~L-asgs~---Dg~I~IWd~~t~~~~~~l-~~h~~~It~i~fspd---g~~Latgs~Dg~ 572 (784)
..+.+|.+.|++++|+|++..| ++|+. ||.|+|||+.+++..... .+|...|++++|+|+ +.+|++++.||.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 3457799999999999999655 55655 899999999988765443 379999999999998 699999999999
Q ss_pred EEEEcCCCCcceeeeccCCCCCeEEEEE------cCCCCcEEEEEeCCCeEEEEeCCCCe-eEEeec-------CCeeEE
Q 047260 573 VRLWDAANPNFCSQAYTGHSSPIMSLDF------HPKKTDLFCFCDNDNEIQYWSINPFL-CTHITK-------GGTAQV 638 (784)
Q Consensus 573 I~IWdl~~~~~~~~~~~~h~~~V~sl~~------sp~~~~ll~sgs~dg~I~iwDl~~~~-~~~~~~-------~~v~~v 638 (784)
|++||+.++......+.+|...|.+++| +|++. +|++++.|+.|++||++... .+..+. ..+.++
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 9999999877567778899999999966 55665 78899999999999998765 344432 267778
Q ss_pred E----EecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcC---CCCEEEEEeCC-eEEEEeCCCCceEEE
Q 047260 639 R----FQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDT---NGDYLASVSQN-LVKVWSMASGECIQE 710 (784)
Q Consensus 639 ~----fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~sp---dg~~Lasgsdd-~I~IwDl~t~~~i~~ 710 (784)
. |++++..+++++.|+.|++||+++++.... ..|...|.+++|+| ++.+|++++.+ .|++||+++++++..
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 249 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG 249 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc
Confidence 7 678999999999999999999999987554 55889999999999 89999998855 999999988765544
Q ss_pred ec-----cCCCceEEEEEecCCC-EEEEEECCCeEEEEECCCCc--------------------eEEecccCCceEEEEE
Q 047260 711 LS-----SNGNQFHSCVFHPSYS-TLLVVGGISSLELWNMAENK--------------------SMTIAAHENIISALAQ 764 (784)
Q Consensus 711 l~-----~~~~~I~sl~fspdg~-~L~s~s~dg~I~Iwdl~~~~--------------------~~~~~~h~~~V~slaf 764 (784)
+. .|...|.+++|+|++. +|++++.||.|++||+..+. ...+..|...|++++|
T Consensus 250 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~ 329 (357)
T 3i2n_A 250 FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDW 329 (357)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEE
T ss_pred eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEE
Confidence 44 8999999999999998 89999999999999987542 2256789999999999
Q ss_pred eCCCCEEE-EEECCCcEEEeC
Q 047260 765 SPVTGMVA-SASHDSSVKLWK 784 (784)
Q Consensus 765 spdg~~La-Sgs~DG~V~IWd 784 (784)
+|++++|+ +++.||.|+|||
T Consensus 330 s~~~~~l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 330 SPDKRGLCVCSSFDQTVRVLI 350 (357)
T ss_dssp CSSSTTEEEEEETTSEEEEEE
T ss_pred cCCCCeEEEEecCCCcEEEEE
Confidence 99999888 899999999996
No 39
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1e-34 Score=316.30 Aligned_cols=292 Identities=16% Similarity=0.227 Sum_probs=236.4
Q ss_pred CCCCccccccc-----ccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCce
Q 047260 436 GTGSLASASNL-----LEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKV 510 (784)
Q Consensus 436 ~~~~~~ss~~~-----~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V 510 (784)
++...+.++.+ .+....++.+|+.|++|++|+....... .........+.+|...|
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~-------------------~~~~~~~~~l~~h~~~V 79 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQN-------------------GYFGIPHKALTGHNHFV 79 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCS-------------------SBSEEEEEEECCCSSCE
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcc-------------------cccccccchhccCCCce
Confidence 33344455544 3435566778999999999987543210 11223566789999999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcce-eeecc
Q 047260 511 TCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFC-SQAYT 589 (784)
Q Consensus 511 ~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~-~~~~~ 589 (784)
++++|+|++.+|++|+.|++|+|||+.+++.+..+.+|...|++++|+|++++|++++.|++|++||+...... .....
T Consensus 80 ~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 159 (343)
T 2xzm_R 80 SDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKE 159 (343)
T ss_dssp EEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTT
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999743211 11223
Q ss_pred CCCCCeEEEEEcCCCC---------cEEEEEeCCCeEEEEeCCCCee--EEeecCCeeEEEEecCCCEEEEEECCCcEEE
Q 047260 590 GHSSPIMSLDFHPKKT---------DLFCFCDNDNEIQYWSINPFLC--THITKGGTAQVRFQPRIGQLLAAASDKVVSI 658 (784)
Q Consensus 590 ~h~~~V~sl~~sp~~~---------~ll~sgs~dg~I~iwDl~~~~~--~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~I 658 (784)
+|...|.+++|+|++. .++++++.|+.|++||.+.... ...+...+.+++|+|++.+|++++.|+.|++
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLI 239 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEE
Confidence 7889999999999863 4889999999999999653222 2335578999999999999999999999999
Q ss_pred EECCC-CeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEE--Eec-----------cCCCceEEEEEe
Q 047260 659 FDIET-DRQTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQ--ELS-----------SNGNQFHSCVFH 724 (784)
Q Consensus 659 wDl~t-~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~--~l~-----------~~~~~I~sl~fs 724 (784)
||++. ......+. +...|.+++|+|++.+++++.++.|++||+.+++.+. .+. +|...|.+++|+
T Consensus 240 wd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 240 WDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp EESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred EECCCCcccceeec-CCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence 99954 44444443 5567999999999999998888899999998876433 443 567789999999
Q ss_pred cCCCEEEEEECCCeEEEEECCCC
Q 047260 725 PSYSTLLVVGGISSLELWNMAEN 747 (784)
Q Consensus 725 pdg~~L~s~s~dg~I~Iwdl~~~ 747 (784)
|++.+|++++.||.|++|++.++
T Consensus 319 p~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 319 ALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp SSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCCCeEEEecCCceEEEEEEEcc
Confidence 99999999999999999998654
No 40
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-34 Score=320.89 Aligned_cols=277 Identities=15% Similarity=0.217 Sum_probs=244.9
Q ss_pred eecCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEC----CCCc------eeeecCC----------CCCCeEEEEEccCC
Q 047260 503 IRSRNSKVTCCHFSSDGK-LLASSGHDRKVVLWNM----DTLQ------TESTPED----------HKSVVTDVRFRPNS 561 (784)
Q Consensus 503 l~~H~~~V~~l~fspdg~-~Lasgs~Dg~I~IWd~----~t~~------~~~~l~~----------h~~~It~i~fspdg 561 (784)
...|.+.|++++|+|+++ +||+|+.||.|+|||+ .+++ ....+.. |...|++++|+|++
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 455779999999999999 9999999999999999 8877 4444443 68899999999999
Q ss_pred CEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecC---C----
Q 047260 562 SQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKG---G---- 634 (784)
Q Consensus 562 ~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~---~---- 634 (784)
++|++++.||.|++||. ++. ....+..|...|.+++|+|++. +|++++.|+.|++||+++...+..+.. .
T Consensus 121 ~~l~~~~~dg~i~i~~~-~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNK-TGA-LLNVLNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp SEEEEEETTSCEEEEET-TSC-EEEEECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred CEEEEEeCCCeEEEEeC-CCC-eeeeccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 99999999999999993 333 6677889999999999999987 677888999999999998877766542 2
Q ss_pred -----------eeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeC
Q 047260 635 -----------TAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSM 702 (784)
Q Consensus 635 -----------v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl 702 (784)
+.++.|+++ ..+++++.++.|++||+++++.+..+..|...|.+++|+|++.+|++++.+ .|++||+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHG 276 (425)
T ss_dssp --------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECS
T ss_pred eeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 778899987 568899999999999999999999999999999999999999999999955 9999999
Q ss_pred CCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEE
Q 047260 703 ASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVK 781 (784)
Q Consensus 703 ~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~ 781 (784)
++++++..+..|...|.+++|+|++ ++++++.|+.|++||+.+++.+ .+..|...|.+++|+|++++|++++.||.|+
T Consensus 277 ~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 355 (425)
T 1r5m_A 277 GNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVN 355 (425)
T ss_dssp SSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEE
Confidence 9999999999999999999999999 9999999999999999998877 5668899999999999999999999999999
Q ss_pred EeC
Q 047260 782 LWK 784 (784)
Q Consensus 782 IWd 784 (784)
|||
T Consensus 356 i~~ 358 (425)
T 1r5m_A 356 VYD 358 (425)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 41
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.5e-34 Score=305.37 Aligned_cols=293 Identities=18% Similarity=0.283 Sum_probs=257.9
Q ss_pred CCCCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEE
Q 047260 434 SEGTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCC 513 (784)
Q Consensus 434 ~~~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l 513 (784)
..|+...+.++.+.++..+++.+|+.|++|++|+..... .........+.+|...|+++
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~---------------------~~~~~~~~~l~~h~~~V~~~ 92 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDE---------------------TNYGIPQRALRGHSHFVSDV 92 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSS---------------------SCSEEEEEEECCCSSCEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC---------------------cccceeeEEEeCCCCCEEEE
Confidence 457777788999988877888889999999999875432 11223567789999999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCC
Q 047260 514 HFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSS 593 (784)
Q Consensus 514 ~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~ 593 (784)
+|+|++++|++++.|+.|++|+............+...+..+.+++++.+|++++.|+.+++||+...........+|..
T Consensus 93 ~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~ 172 (340)
T 4aow_A 93 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE 172 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSS
T ss_pred EECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccC
Confidence 99999999999999999999999999998888899999999999999999999999999999999887666667788999
Q ss_pred CeEEEEEcCCCC-cEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE
Q 047260 594 PIMSLDFHPKKT-DLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS 669 (784)
Q Consensus 594 ~V~sl~~sp~~~-~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~ 669 (784)
.|.+++|++++. .++++++.|+.|++||+++......+. ..+.+++|+|++.+|++++.|+.|++||+++.+.+..
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred cccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee
Confidence 999999998764 467889999999999999988776654 6789999999999999999999999999999999988
Q ss_pred EeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEec---------cCCCceEEEEEecCCCEEEEEECCCeEE
Q 047260 670 LQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELS---------SNGNQFHSCVFHPSYSTLLVVGGISSLE 740 (784)
Q Consensus 670 l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~---------~~~~~I~sl~fspdg~~L~s~s~dg~I~ 740 (784)
+.. ...|.+++|+|++.+++++.++.|+|||++++.++..+. .|...|.+++|+|++++|++++.||.|+
T Consensus 253 ~~~-~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 253 LDG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EEC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ecC-CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 874 568999999999999988888899999999988776664 5678899999999999999999999999
Q ss_pred EEECCCCc
Q 047260 741 LWNMAENK 748 (784)
Q Consensus 741 Iwdl~~~~ 748 (784)
|||+.+|+
T Consensus 332 iW~~~tGt 339 (340)
T 4aow_A 332 VWQVTIGT 339 (340)
T ss_dssp EEEEEC--
T ss_pred EEeCCCcC
Confidence 99998875
No 42
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.2e-34 Score=315.88 Aligned_cols=280 Identities=18% Similarity=0.303 Sum_probs=243.5
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEE
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHF 515 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~f 515 (784)
++...+.+..+.++.. ++.+|+.|+++++|+.... .....+..|...|.+++|
T Consensus 62 gH~~~V~~~~~s~d~~-~l~s~s~Dg~v~vWd~~~~--------------------------~~~~~~~~~~~~v~~~~~ 114 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKR-RIVSSSQDGKVIVWDSFTT--------------------------NKEHAVTMPCTWVMACAY 114 (354)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTC--------------------------CEEEEEECSSSCCCEEEE
T ss_pred CCCCeEEEEEECCCCC-EEEEEeCCCeEEEEECCCC--------------------------CcceEEecCCCCEEEEEE
Confidence 4445567777777665 4557999999999975322 234456678899999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCC------ceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeecc
Q 047260 516 SSDGKLLASSGHDRKVVLWNMDTL------QTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYT 589 (784)
Q Consensus 516 spdg~~Lasgs~Dg~I~IWd~~t~------~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~ 589 (784)
+|+|.+|++|+.|+.|++|++... .....+..|...|.+++|+|++..|++++.|++|++||+++++ +...+.
T Consensus 115 sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~-~~~~~~ 193 (354)
T 2pbi_B 115 APSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ-LLQSFH 193 (354)
T ss_dssp CTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEE
T ss_pred CCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEc
Confidence 999999999999999999998643 3345566899999999999999999999999999999999876 677888
Q ss_pred CCCCCeEEEEEcCCC-CcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCe
Q 047260 590 GHSSPIMSLDFHPKK-TDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDR 665 (784)
Q Consensus 590 ~h~~~V~sl~~sp~~-~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~ 665 (784)
+|...|.+++|+|+. ..+|++|+.|+.|++||+++..++..+. ..+.+++|+|++..|++++.|+.|++||++.++
T Consensus 194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 999999999999863 3589999999999999999988776654 678999999999999999999999999999998
Q ss_pred EEEEEeCC--CCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEE
Q 047260 666 QTHSLQGH--AELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELW 742 (784)
Q Consensus 666 ~i~~l~~h--~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iw 742 (784)
.+..+..+ ...+.+++|+|++.+|++++.+ .|+|||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|+||
T Consensus 274 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 274 EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 87777643 3478999999999999999966 99999999999999999999999999999999999999999999999
Q ss_pred E
Q 047260 743 N 743 (784)
Q Consensus 743 d 743 (784)
+
T Consensus 354 ~ 354 (354)
T 2pbi_B 354 A 354 (354)
T ss_dssp C
T ss_pred C
Confidence 6
No 43
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.4e-34 Score=331.93 Aligned_cols=339 Identities=14% Similarity=0.219 Sum_probs=265.0
Q ss_pred CCCCc-cccccccc--CCCceEeccccCCcceeEEeecC---------------------------CCCcceeccccC--
Q 047260 436 GTGSL-ASASNLLE--DIDRFADVGSIDENMESLLSHDG---------------------------GDGRELYGTLKH-- 483 (784)
Q Consensus 436 ~~~~~-~ss~~~~~--~~~~ll~~gS~D~~v~~~~~~~~---------------------------~~~r~l~~~~~~-- 483 (784)
++... +.+..+.+ +.. ++.+|+.|+.+++|+...+ .+++.++.....
T Consensus 61 ~h~~~~v~~~~~sp~~~~~-~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 139 (615)
T 1pgu_A 61 GHGSSVVTTVKFSPIKGSQ-YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 139 (615)
T ss_dssp TTTTSCEEEEEECSSTTCC-EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS
T ss_pred cCCCceEEEEEECcCCCCC-EEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC
Confidence 34444 66677777 554 5557889999999998532 111111111110
Q ss_pred --CCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceeeecCCCCC---CeEEEEE
Q 047260 484 --SPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGK-LLASSGHDRKVVLWNMDTLQTESTPEDHKS---VVTDVRF 557 (784)
Q Consensus 484 --~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~-~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~---~It~i~f 557 (784)
.....|+ ....+..+.+|...|++++|+|+++ +|++++.|+.|++||+.+++.+..+..|.. .|++++|
T Consensus 140 ~~~~v~~~d-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 214 (615)
T 1pgu_A 140 NFGVFISWD-----SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF 214 (615)
T ss_dssp CSEEEEETT-----TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE
T ss_pred CccEEEEEE-----CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEE
Confidence 0111111 1235677889999999999999998 899999999999999999999999999999 9999999
Q ss_pred ccC-CCEEEEEeCCCeEEEEcCCCCcceeeec-c---CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec
Q 047260 558 RPN-SSQLATASVDKSVRLWDAANPNFCSQAY-T---GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK 632 (784)
Q Consensus 558 spd-g~~Latgs~Dg~I~IWdl~~~~~~~~~~-~---~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~ 632 (784)
+|+ +++|++++.||.|++||+.+++ ....+ . .|...|.+++|+ ++. ++++++.|+.|++||+++.+.+..+.
T Consensus 215 ~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 215 SPDSGEFVITVGSDRKISCFDGKSGE-FLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp CSTTCCEEEEEETTCCEEEEETTTCC-EEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCC-EeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 999 9999999999999999999877 44455 5 899999999999 654 78889999999999998654433222
Q ss_pred C------------------------------------------------C------------------------------
Q 047260 633 G------------------------------------------------G------------------------------ 634 (784)
Q Consensus 633 ~------------------------------------------------~------------------------------ 634 (784)
. .
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~ 371 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDH 371 (615)
T ss_dssp CCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCC
T ss_pred CCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcc
Confidence 1 1
Q ss_pred ---eeEEEE----------------------------------ecC----------------------------------
Q 047260 635 ---TAQVRF----------------------------------QPR---------------------------------- 643 (784)
Q Consensus 635 ---v~~v~f----------------------------------sp~---------------------------------- 643 (784)
+.+++| +|+
T Consensus 372 ~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (615)
T 1pgu_A 372 SNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSA 451 (615)
T ss_dssp CSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEE
T ss_pred cCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceE
Confidence 111111 000
Q ss_pred ----CCEEEEEEC-CCcEEEEECCCCeEE-EEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEecc-CC
Q 047260 644 ----IGQLLAAAS-DKVVSIFDIETDRQT-HSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSS-NG 715 (784)
Q Consensus 644 ----~~~Ll~~s~-Dg~I~IwDl~t~~~i-~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~-~~ 715 (784)
+..+++++. |+.|++||+.+++.. ..+..|...|.+++|+|++++|++++.+ .|+|||+.+++++..+.. |.
T Consensus 452 ~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~ 531 (615)
T 1pgu_A 452 VSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT 531 (615)
T ss_dssp EEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS
T ss_pred EEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCC
Confidence 334455555 666666666655444 4556788999999999999999999865 999999999999999988 99
Q ss_pred CceEEEEEec----------CCCEEEEEECCCeEEEEECCCC-ceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 716 NQFHSCVFHP----------SYSTLLVVGGISSLELWNMAEN-KSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 716 ~~I~sl~fsp----------dg~~L~s~s~dg~I~Iwdl~~~-~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
..|.+++|+| ++.+|++++.|+.|++||+.++ +.+ .+.+|...|++++|+|++. |++++.||.|+||
T Consensus 532 ~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw 610 (615)
T 1pgu_A 532 SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRW 610 (615)
T ss_dssp SCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEE
T ss_pred CceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEE
Confidence 9999999999 9999999999999999999987 444 6778999999999999999 9999999999999
Q ss_pred C
Q 047260 784 K 784 (784)
Q Consensus 784 d 784 (784)
|
T Consensus 611 ~ 611 (615)
T 1pgu_A 611 N 611 (615)
T ss_dssp E
T ss_pred e
Confidence 6
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.5e-34 Score=305.71 Aligned_cols=283 Identities=22% Similarity=0.371 Sum_probs=245.9
Q ss_pred CCCCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEE
Q 047260 434 SEGTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCC 513 (784)
Q Consensus 434 ~~~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l 513 (784)
..++...+.+..+.++... +.+|+.|+.+++|+..+. ..+..+.+|...|.++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~-l~s~~~dg~i~iw~~~~~--------------------------~~~~~~~~h~~~v~~~ 71 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDG--------------------------KFEKTISGHKLGISDV 71 (312)
T ss_dssp ECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTC--------------------------CEEEEECCCSSCEEEE
T ss_pred EcccCCcEEEEEECCCCCE-EEEeeCCCeEEEEeCCCc--------------------------ccchhhccCCCceEEE
Confidence 3455556777778776654 457889999999965322 1345577899999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCC
Q 047260 514 HFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSS 593 (784)
Q Consensus 514 ~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~ 593 (784)
+|+|++++|++|+.|+.|+|||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++ ....+..|..
T Consensus 72 ~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~ 150 (312)
T 4ery_A 72 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSD 150 (312)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-EEEEECCCSS
T ss_pred EEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-EEEEecCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999876 6677888999
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec----CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE
Q 047260 594 PIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK----GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS 669 (784)
Q Consensus 594 ~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~----~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~ 669 (784)
+|.+++|+|++. ++++++.|+.|++||+++.+.+..+. ..+..++|+|++.+|++++.|+.|++||+++++.+..
T Consensus 151 ~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 151 PVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred cEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 999999999887 78889999999999999877765542 5678899999999999999999999999999999999
Q ss_pred EeCCCCCEEE---EEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEE--CCCeEEEEE
Q 047260 670 LQGHAELVNY---ICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVG--GISSLELWN 743 (784)
Q Consensus 670 l~~h~~~V~s---l~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s--~dg~I~Iwd 743 (784)
+.+|...+.+ ....+++.+|++++.+ .|++||+.+++.+..+.+|...|.+++|+|++.++++++ .|+.|++|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred EEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence 9888764332 2334678899998865 999999999999999999999999999999999999987 589999998
Q ss_pred CC
Q 047260 744 MA 745 (784)
Q Consensus 744 l~ 745 (784)
.+
T Consensus 310 ~d 311 (312)
T 4ery_A 310 SD 311 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-36 Score=329.11 Aligned_cols=279 Identities=16% Similarity=0.185 Sum_probs=228.9
Q ss_pred eecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCC--ceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCC
Q 047260 503 IRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTL--QTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAAN 580 (784)
Q Consensus 503 l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~--~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~ 580 (784)
+..|.+.|+|++|+|++++||+|+.|+.|+|||+.++ +.+..+.+|...|++++|+|++++|++++.|++|+|||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 4457889999999999999999999999999999988 78888999999999999999999999999999999999987
Q ss_pred Cc--ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe------eEEe-ecCCeeEEEEecCCCEEEEEE
Q 047260 581 PN--FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL------CTHI-TKGGTAQVRFQPRIGQLLAAA 651 (784)
Q Consensus 581 ~~--~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~------~~~~-~~~~v~~v~fsp~~~~Ll~~s 651 (784)
+. .....+.+|...|.+++|+|++. +|++++.|+.|++||++... .+.. +...+.+++|+|++.+|++++
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCceeeeeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 65 23455678999999999999877 67788899999999998754 2222 567899999999999999999
Q ss_pred CCCcEEEEECC------------------CCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCce----E
Q 047260 652 SDKVVSIFDIE------------------TDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGEC----I 708 (784)
Q Consensus 652 ~Dg~I~IwDl~------------------t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~----i 708 (784)
.|+.|++||++ .++++..+ +|...|.+++|+|++++|++++.+ .|+|||+.++++ +
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 99999999985 35566666 899999999999999999999866 999999999987 7
Q ss_pred EEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCce---------------------------------------
Q 047260 709 QELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKS--------------------------------------- 749 (784)
Q Consensus 709 ~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~--------------------------------------- 749 (784)
..+..|...|.+++|+|++.+|++++.++.+ +|+......
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRST 323 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC------------
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccccc
Confidence 8888999999999999999988887666555 776552110
Q ss_pred E--------------EecccCCceEEEEEeCCC-C---EEEEEECCCcEEEeC
Q 047260 750 M--------------TIAAHENIISALAQSPVT-G---MVASASHDSSVKLWK 784 (784)
Q Consensus 750 ~--------------~~~~h~~~V~slafspdg-~---~LaSgs~DG~V~IWd 784 (784)
. ....|.+.|+++++.+.. . .|+||+.||.|+|||
T Consensus 324 ~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWd 376 (377)
T 3dwl_C 324 FRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT 376 (377)
T ss_dssp -------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEEC
T ss_pred ccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEec
Confidence 0 001299999999977644 3 699999999999997
No 46
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-35 Score=329.38 Aligned_cols=276 Identities=18% Similarity=0.313 Sum_probs=244.4
Q ss_pred CceEEEEEcCCCC-EEEEE----------eCCCeEEEEECCCCc---eeeecCCCCCCeEEEEEccCCCEEEEEeCCCeE
Q 047260 508 SKVTCCHFSSDGK-LLASS----------GHDRKVVLWNMDTLQ---TESTPEDHKSVVTDVRFRPNSSQLATASVDKSV 573 (784)
Q Consensus 508 ~~V~~l~fspdg~-~Lasg----------s~Dg~I~IWd~~t~~---~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I 573 (784)
..|.+++|+|+++ +|++| +.|+.|+|||+.++. .+..+ .|...|++++|+|++++|++++.||.|
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeE
Confidence 4689999999987 99999 889999999999875 33333 689999999999999999999999999
Q ss_pred EEEcCCC---CcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe------eE------EeecCCeeEE
Q 047260 574 RLWDAAN---PNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL------CT------HITKGGTAQV 638 (784)
Q Consensus 574 ~IWdl~~---~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~------~~------~~~~~~v~~v 638 (784)
++||+.+ +......+.+|...|.+++|+|++..+|++++.|+.|++||+++.. .. ..+...+.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 9999987 2336777889999999999999966689999999999999998765 22 2245789999
Q ss_pred EEecC-CCEEEEEECCCcEEEEECCCCeEEEEEeCC------CCCEEEEEEcCCC-CEEEEEeCC----eEEEEeCCCC-
Q 047260 639 RFQPR-IGQLLAAASDKVVSIFDIETDRQTHSLQGH------AELVNYICWDTNG-DYLASVSQN----LVKVWSMASG- 705 (784)
Q Consensus 639 ~fsp~-~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h------~~~V~sl~~spdg-~~Lasgsdd----~I~IwDl~t~- 705 (784)
+|+|+ +..|++++.|+.|++||+++++.+..+..+ ...|.+++|+|++ .+|++++++ .|++||++++
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 99999 678888999999999999999999988876 7899999999997 688888755 9999999986
Q ss_pred ceEEEec-cCCCceEEEEEec-CCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCC-CEEEEEECCCcEE
Q 047260 706 ECIQELS-SNGNQFHSCVFHP-SYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVT-GMVASASHDSSVK 781 (784)
Q Consensus 706 ~~i~~l~-~~~~~I~sl~fsp-dg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg-~~LaSgs~DG~V~ 781 (784)
.++..+. .|...|.+++|+| ++.+|++++.|+.|++||+.+++.+ .+..|...|.+++|+|++ .+|++++.||.|+
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6777887 8999999999999 8999999999999999999998877 677899999999999999 8999999999999
Q ss_pred EeC
Q 047260 782 LWK 784 (784)
Q Consensus 782 IWd 784 (784)
|||
T Consensus 332 iw~ 334 (416)
T 2pm9_A 332 VQT 334 (416)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 47
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=311.28 Aligned_cols=286 Identities=17% Similarity=0.270 Sum_probs=233.0
Q ss_pred cccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCC
Q 047260 440 LASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDG 519 (784)
Q Consensus 440 ~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg 519 (784)
.++...+.++...+ ++|+.|+.|++|+..... .........+|...|++++|+|++
T Consensus 18 ~v~~l~~sp~g~~l-as~~~D~~i~iw~~~~~~-----------------------~~~~~~~~~~h~~~v~~~~~sp~g 73 (345)
T 3fm0_A 18 RCWFLAWNPAGTLL-ASCGGDRRIRIWGTEGDS-----------------------WICKSVLSEGHQRTVRKVAWSPCG 73 (345)
T ss_dssp CEEEEEECTTSSCE-EEEETTSCEEEEEEETTE-----------------------EEEEEEECSSCSSCEEEEEECTTS
T ss_pred cEEEEEECCCCCEE-EEEcCCCeEEEEEcCCCc-----------------------ceeeeeeccccCCcEEEEEECCCC
Confidence 45667777766555 578899999999874321 011222346899999999999999
Q ss_pred CEEEEEeCCCeEEEEECCCC--ceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCc--ceeeeccCCCCCe
Q 047260 520 KLLASSGHDRKVVLWNMDTL--QTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPN--FCSQAYTGHSSPI 595 (784)
Q Consensus 520 ~~Lasgs~Dg~I~IWd~~t~--~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~--~~~~~~~~h~~~V 595 (784)
++|++|+.|+.|+|||+.+. +.+..+.+|...|++++|+|++++|++|+.|++|+|||+++.. .+...+.+|...|
T Consensus 74 ~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v 153 (345)
T 3fm0_A 74 NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV 153 (345)
T ss_dssp SEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE
T ss_pred CEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe
Confidence 99999999999999999866 4577889999999999999999999999999999999998754 2456678999999
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee--EE---eecCCeeEEEEecCCCEEEEEECCCcEEEEECCCC------
Q 047260 596 MSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC--TH---ITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETD------ 664 (784)
Q Consensus 596 ~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~--~~---~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~------ 664 (784)
.+++|+|++. +|++++.|+.|++||++.... .. .+...|.+++|+|++.+|++++.|+.|+|||....
T Consensus 154 ~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 154 KHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp EEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCC
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccc
Confidence 9999999987 788899999999999987542 22 34578999999999999999999999999996321
Q ss_pred ---------eEEEEEeC-CCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCc---------eEEEeccCCCceEEEEEe
Q 047260 665 ---------RQTHSLQG-HAELVNYICWDTNGDYLASVSQN-LVKVWSMASGE---------CIQELSSNGNQFHSCVFH 724 (784)
Q Consensus 665 ---------~~i~~l~~-h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~---------~i~~l~~~~~~I~sl~fs 724 (784)
+++..+.+ |...|.+++|+|++.+|++++.+ .|++|+...+. ......+|...|.+++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~ 312 (345)
T 3fm0_A 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWN 312 (345)
T ss_dssp CCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEEC
T ss_pred eeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEe
Confidence 34455555 88899999999999999998866 99999987642 122335788999999999
Q ss_pred cCCC-EEEEEECCCeEEEEECCCCceE
Q 047260 725 PSYS-TLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 725 pdg~-~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
|++. +|++++.||+|++|++.+++..
T Consensus 313 p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 313 PKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp SSSTTEEEEEETTSCEEEEEECC----
T ss_pred CCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 9984 8999999999999999887754
No 48
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-35 Score=326.36 Aligned_cols=283 Identities=16% Similarity=0.278 Sum_probs=235.8
Q ss_pred eEEeEe-ecCCCceEEEEEcC-CCCEEEEEeCCCeEEEEECCC---Cc---eeeecCCCCCCeEEEEEccCCCEEEEEeC
Q 047260 498 CEVGCI-RSRNSKVTCCHFSS-DGKLLASSGHDRKVVLWNMDT---LQ---TESTPEDHKSVVTDVRFRPNSSQLATASV 569 (784)
Q Consensus 498 ~~i~~l-~~H~~~V~~l~fsp-dg~~Lasgs~Dg~I~IWd~~t---~~---~~~~l~~h~~~It~i~fspdg~~Latgs~ 569 (784)
..+..+ .+|.+.|++++|+| ++++||+|+.||.|+|||+.+ +. ....+ .|...|++++|+|++++|++++.
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~ 131 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSK 131 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEET
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeC
Confidence 456667 88999999999999 999999999999999999876 33 22333 59999999999999999999999
Q ss_pred CCeEEEEcCC---CCcceeeecc----------C--CCCCeEEEE--EcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee-
Q 047260 570 DKSVRLWDAA---NPNFCSQAYT----------G--HSSPIMSLD--FHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT- 631 (784)
Q Consensus 570 Dg~I~IWdl~---~~~~~~~~~~----------~--h~~~V~sl~--~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~- 631 (784)
||.|++||++ ++. ...... . +...+.++. +++++. ++++++.|+.|++||+++.+++..+
T Consensus 132 dg~i~vwd~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~ 209 (437)
T 3gre_A 132 DGQIIVLKVNHYQQES-EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLERLQIIE 209 (437)
T ss_dssp TSEEEEEEEEEEEETT-EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEEeccccCCc-eeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCeeeEEEc
Confidence 9999999995 332 222211 1 456677776 445554 8889999999999999987776554
Q ss_pred ----cCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEe-CCCCCEEEEEEcC----CCCEEEEEeCC-eEEEEe
Q 047260 632 ----KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQ-GHAELVNYICWDT----NGDYLASVSQN-LVKVWS 701 (784)
Q Consensus 632 ----~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~-~h~~~V~sl~~sp----dg~~Lasgsdd-~I~IwD 701 (784)
...+.+++|+|++.+|++++.||.|++||+++++++..+. .|...|.+++|+| ++.+|++++.+ .|+|||
T Consensus 210 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 210 NSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp CCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred cCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEE
Confidence 4679999999999999999999999999999999999886 7888999997664 67799999876 899999
Q ss_pred CCCCceEEEeccC--------------------------CCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-Eecc
Q 047260 702 MASGECIQELSSN--------------------------GNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAA 754 (784)
Q Consensus 702 l~t~~~i~~l~~~--------------------------~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~ 754 (784)
+++++++..+..| ...|.+++|+ ++.+|++++.|+.|++||+.+++.. .+..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 290 FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp TTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred cCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 9999988887643 3457889999 7789999999999999999987754 2222
Q ss_pred -------------------------------------cCCceEEEEEeCC--CCEEEEEECCCcEEEeC
Q 047260 755 -------------------------------------HENIISALAQSPV--TGMVASASHDSSVKLWK 784 (784)
Q Consensus 755 -------------------------------------h~~~V~slafspd--g~~LaSgs~DG~V~IWd 784 (784)
|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 369 PSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp C--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8999999999998 77999999999999996
No 49
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.2e-34 Score=320.78 Aligned_cols=286 Identities=18% Similarity=0.325 Sum_probs=243.0
Q ss_pred CCCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEE
Q 047260 435 EGTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCH 514 (784)
Q Consensus 435 ~~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~ 514 (784)
.++...+.+..+.++...+ .+|+.|++|++|+.... ..+..+..|...|.+++
T Consensus 63 ~gH~~~V~~~~~sp~~~~l-~s~s~D~~v~iWd~~~~--------------------------~~~~~~~~h~~~v~~~~ 115 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWI-VSASQDGRLIVWNALTS--------------------------QKTHAIKLHCPWVMECA 115 (380)
T ss_dssp CCCSSCEEEEEECTTSSCE-EEEETTSEEEEEETTTT--------------------------EEEEEEECCCTTCCCCE
T ss_pred cccccEEEEEEEcCCCCEE-EEEeCCCeEEEEECCCC--------------------------ccceEEecCCCCEEEEE
Confidence 4555567778887776555 47999999999976322 24567788999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCC-------ceeeecCCCCCCeEEEEEccC-CCEEEEEeCCCeEEEEcCCCCcceee
Q 047260 515 FSSDGKLLASSGHDRKVVLWNMDTL-------QTESTPEDHKSVVTDVRFRPN-SSQLATASVDKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 515 fspdg~~Lasgs~Dg~I~IWd~~t~-------~~~~~l~~h~~~It~i~fspd-g~~Latgs~Dg~I~IWdl~~~~~~~~ 586 (784)
|+|++++|++|+.|+.|+|||+.+. .....+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.++.. ..
T Consensus 116 ~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~-~~ 194 (380)
T 3iz6_a 116 FAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR-IS 194 (380)
T ss_dssp ECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE-EE
T ss_pred ECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE-EE
Confidence 9999999999999999999998753 234567899999999999996 55799999999999999998763 33
Q ss_pred ec-----cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-CeeE---EeecCCeeEEEEecCCCEEEEEECCCcEE
Q 047260 587 AY-----TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP-FLCT---HITKGGTAQVRFQPRIGQLLAAASDKVVS 657 (784)
Q Consensus 587 ~~-----~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~-~~~~---~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~ 657 (784)
.+ .+|...|.+++|++.+..+|++|+.|+.|++||++. ...+ ..+...|.+++|+|++.+|++++.|+.|+
T Consensus 195 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 274 (380)
T 3iz6_a 195 IFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCR 274 (380)
T ss_dssp EECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEE
T ss_pred EeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEE
Confidence 33 579999999999986667999999999999999973 3333 34567899999999999999999999999
Q ss_pred EEECCCCeEEEEEeCCC-------CCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEe----ccCCCceEEEEEec
Q 047260 658 IFDIETDRQTHSLQGHA-------ELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQEL----SSNGNQFHSCVFHP 725 (784)
Q Consensus 658 IwDl~t~~~i~~l~~h~-------~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l----~~~~~~I~sl~fsp 725 (784)
+||+++++.+..+..+. ..|++++|+|+|++|++++.+ .|+|||+.+++.+..+ .+|...|.+++|+|
T Consensus 275 lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 354 (380)
T 3iz6_a 275 LFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSS 354 (380)
T ss_dssp EEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECS
T ss_pred EEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECC
Confidence 99999999888876543 248999999999999999865 9999999999988887 57899999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCc
Q 047260 726 SYSTLLVVGGISSLELWNMAENK 748 (784)
Q Consensus 726 dg~~L~s~s~dg~I~Iwdl~~~~ 748 (784)
++.+|++++.|++|+||++...+
T Consensus 355 dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 355 DGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999999999999998654
No 50
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.4e-33 Score=316.86 Aligned_cols=280 Identities=16% Similarity=0.304 Sum_probs=246.3
Q ss_pred eEEeEeecCCCce-EEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q 047260 498 CEVGCIRSRNSKV-TCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLW 576 (784)
Q Consensus 498 ~~i~~l~~H~~~V-~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IW 576 (784)
.....+.+|.+.| .|+.| ++++|++|+.||.|++||+.+++.+..+.+|...|++++|++++ +|++|+.||+|++|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 3556788999885 66666 56799999999999999999999999999999999999999988 99999999999999
Q ss_pred cCCCCcceeeeccCCCCCeEEEEEcCC-CCcEEEEEeCCCeEEEEeCCCCeeE-----------------------Eeec
Q 047260 577 DAANPNFCSQAYTGHSSPIMSLDFHPK-KTDLFCFCDNDNEIQYWSINPFLCT-----------------------HITK 632 (784)
Q Consensus 577 dl~~~~~~~~~~~~h~~~V~sl~~sp~-~~~ll~sgs~dg~I~iwDl~~~~~~-----------------------~~~~ 632 (784)
|+++++ ....+.+|...|.+++|++. +..++++++.|+.|++||++..... ....
T Consensus 189 d~~~~~-~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 189 DIKKGC-CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp ETTTTE-EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred ECCCCc-EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 999876 67778899999999999963 3358999999999999999865422 2222
Q ss_pred C-CeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEE
Q 047260 633 G-GTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQE 710 (784)
Q Consensus 633 ~-~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~ 710 (784)
+ .....++++++..+++++.|+.|++||+++++.+..+.+|...|.+++|+|++.+|++++.+ .|++||+++++++.+
T Consensus 268 ~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 268 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 347 (464)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 2 12233457888999999999999999999999999999999999999999999999999966 999999999999999
Q ss_pred eccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 711 LSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 711 l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+..|...|.++.|+ +.+|++++.||.|++||+.+........|...+..++|++++.+|++++ ||.|+|||
T Consensus 348 ~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd 418 (464)
T 3v7d_B 348 LQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYN 418 (464)
T ss_dssp ECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEE
T ss_pred EeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEE
Confidence 99999999999997 4699999999999999999988776667888899999999999999998 89999996
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5e-34 Score=305.50 Aligned_cols=276 Identities=16% Similarity=0.248 Sum_probs=243.1
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCccee
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCS 585 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~ 585 (784)
|.+.|.+++|+|||++++++..++.+.+|+............|...|++++|+|++++|++++ ||.|++||+.++....
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 566799999999999999988888787776665544445558999999999999999999998 9999999998754221
Q ss_pred --eec--cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe--eEEe---ecCCeeEEEEecCCCEEEEEECCCcE
Q 047260 586 --QAY--TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL--CTHI---TKGGTAQVRFQPRIGQLLAAASDKVV 656 (784)
Q Consensus 586 --~~~--~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~--~~~~---~~~~v~~v~fsp~~~~Ll~~s~Dg~I 656 (784)
..+ .+|...|.+++|+|++. ++++++.|+.|++||++... .... +...+.+++|+|++..+++++.|+.|
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeecccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 222 27899999999999886 77788899999999998765 3322 34678999999999999999999999
Q ss_pred EEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEEC
Q 047260 657 SIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGG 735 (784)
Q Consensus 657 ~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~ 735 (784)
++||+++++.+..+..|...|.+++|+|++.+|++++.+ .|++||+++++.+..+. +...+.+++|+|++.+|++++.
T Consensus 166 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcC
Confidence 999999999999999999999999999999999999855 99999999999888774 5678999999999999999999
Q ss_pred CCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 736 ISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 736 dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
++.|++||+.+++...+..|...|.+++|+|++++|++++.||.|++||
T Consensus 245 ~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEE
Confidence 9999999999999888999999999999999999999999999999996
No 52
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=321.26 Aligned_cols=275 Identities=16% Similarity=0.309 Sum_probs=233.2
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----------eeeecCCCC------------CCeEEEEEccCC-
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ-----------TESTPEDHK------------SVVTDVRFRPNS- 561 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~-----------~~~~l~~h~------------~~It~i~fspdg- 561 (784)
|.+.|+|++|+|+|++||+|+.||.|+|||+.+++ ....+.+|. ..|++++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999999876 577888998 889999999998
Q ss_pred -CEEEEEeCCCeEEEEcCCCCcce--------------------------------------e-eeccCCCCCeEEEEEc
Q 047260 562 -SQLATASVDKSVRLWDAANPNFC--------------------------------------S-QAYTGHSSPIMSLDFH 601 (784)
Q Consensus 562 -~~Latgs~Dg~I~IWdl~~~~~~--------------------------------------~-~~~~~h~~~V~sl~~s 601 (784)
.+|++++.|++|++||+.+.... . ....+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999998763311 0 1236899999999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCC-CeeEE----------eecCCeeEEEEecCC-CEEEEEECCCcEEEEECCCCeE---
Q 047260 602 PKKTDLFCFCDNDNEIQYWSINP-FLCTH----------ITKGGTAQVRFQPRI-GQLLAAASDKVVSIFDIETDRQ--- 666 (784)
Q Consensus 602 p~~~~ll~sgs~dg~I~iwDl~~-~~~~~----------~~~~~v~~v~fsp~~-~~Ll~~s~Dg~I~IwDl~t~~~--- 666 (784)
|++. +|+++ .|+.|++||++. ..... .+...+.+++|+|++ ..|++++.|+.|++||+++++.
T Consensus 187 ~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 187 SDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp TTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred CCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9877 66677 799999999994 44443 344679999999998 8999999999999999999886
Q ss_pred -EEEEeCCCC------------CEEEEEEcCCCCEEEEEeCCeEEEEeCCC-CceEEEeccCCCc---------------
Q 047260 667 -THSLQGHAE------------LVNYICWDTNGDYLASVSQNLVKVWSMAS-GECIQELSSNGNQ--------------- 717 (784)
Q Consensus 667 -i~~l~~h~~------------~V~sl~~spdg~~Lasgsdd~I~IwDl~t-~~~i~~l~~~~~~--------------- 717 (784)
+..+..|.. .|.+++|+|++++|++++++.|+|||+++ ++++..+..|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 788888876 89999999999999999999999999997 8888888877532
Q ss_pred eEEEEEecCCCEEEEEECCCeEEEEECCCCceEEeccc---------------------------------CCceEEEEE
Q 047260 718 FHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAAH---------------------------------ENIISALAQ 764 (784)
Q Consensus 718 I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h---------------------------------~~~V~slaf 764 (784)
+..++|+|++.+|++++.||.|++||+.+++.+.+..| ...|.+++|
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 424 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAW 424 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEE
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEE
Confidence 23499999999999999999999999999887764433 456889999
Q ss_pred eCCCCEEEEEECCCcEEEe
Q 047260 765 SPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 765 spdg~~LaSgs~DG~V~IW 783 (784)
+|++++||+++.++ +++|
T Consensus 425 ~p~~~~la~~~~~~-~~~~ 442 (447)
T 3dw8_B 425 HPKENIIAVATTNN-LYIF 442 (447)
T ss_dssp CSSSSEEEEECSSC-EEEE
T ss_pred CCCCCEEEEEecce-eeee
Confidence 99999999998876 6666
No 53
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.8e-33 Score=325.86 Aligned_cols=314 Identities=18% Similarity=0.288 Sum_probs=268.7
Q ss_pred CCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCc-eEEEEEc
Q 047260 438 GSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSK-VTCCHFS 516 (784)
Q Consensus 438 ~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~-V~~l~fs 516 (784)
...+.+..+.++...++. ++ ++.+.+|+..... .....+..+.+|.+. |++++|+
T Consensus 18 ~~~v~~~~~spdg~~l~~-~~-~~~v~v~~~~~~~----------------------~~~~~~~~~~~h~~~~v~~~~~s 73 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAY-PC-GKSAFVRCLDDGD----------------------SKVPPVVQFTGHGSSVVTTVKFS 73 (615)
T ss_dssp TTCCCCCEEETTTTEEEE-EE-TTEEEEEECCSSC----------------------CSSCSEEEECTTTTSCEEEEEEC
T ss_pred cCceeEEEECCCCCEEEE-ec-CCeEEEEECCCCC----------------------CccccceEEecCCCceEEEEEEC
Confidence 344566677777666654 54 7899999764321 011245678899999 9999999
Q ss_pred C--CCCEEEEEeCCCeEEEEECCCC--------ceeeecCCCCCCeEEEEEccCCCEEEEEeCC----CeEEEEcCCCCc
Q 047260 517 S--DGKLLASSGHDRKVVLWNMDTL--------QTESTPEDHKSVVTDVRFRPNSSQLATASVD----KSVRLWDAANPN 582 (784)
Q Consensus 517 p--dg~~Lasgs~Dg~I~IWd~~t~--------~~~~~l~~h~~~It~i~fspdg~~Latgs~D----g~I~IWdl~~~~ 582 (784)
| ++++||+|+.||.|+|||+.++ +....+..|...|.+++|+|++++|++++.| +.|++||.. +
T Consensus 74 p~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~--~ 151 (615)
T 1pgu_A 74 PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG--N 151 (615)
T ss_dssp SSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC--C
T ss_pred cCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC--C
Confidence 9 9999999999999999999744 6777888899999999999999999999988 799999943 3
Q ss_pred ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---C---CeeEEEEecC-CCEEEEEECCCc
Q 047260 583 FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---G---GTAQVRFQPR-IGQLLAAASDKV 655 (784)
Q Consensus 583 ~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~---~v~~v~fsp~-~~~Ll~~s~Dg~ 655 (784)
....+.+|...|.+++|+|++..++++++.|+.|++||+.+.+.+..+. . .+.+++|+|+ +.+|++++.|+.
T Consensus 152 -~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 152 -SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK 230 (615)
T ss_dssp -EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC
T ss_pred -cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe
Confidence 5677889999999999999998889999999999999999988776654 4 7899999999 999999999999
Q ss_pred EEEEECCCCeEEEEE-e---CCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccC----CCceEEEEEecC
Q 047260 656 VSIFDIETDRQTHSL-Q---GHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSN----GNQFHSCVFHPS 726 (784)
Q Consensus 656 I~IwDl~t~~~i~~l-~---~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~----~~~I~sl~fspd 726 (784)
|++||+++++.+..+ . .|...|.+++|+ ++.+|++++.+ .|++||+++++++..+..+ ...+.++.|. +
T Consensus 231 i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 308 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-G 308 (615)
T ss_dssp EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-E
T ss_pred EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-C
Confidence 999999999999998 6 899999999999 99999999865 9999999999999998876 3567788886 8
Q ss_pred CCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 727 YSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 727 g~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+.++++++.|+.|++||+.+++.+ .+..|...|.+++| |+ |++++.||.|++||
T Consensus 309 ~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~w~ 363 (615)
T 1pgu_A 309 NGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIMEWS 363 (615)
T ss_dssp TTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEETT
T ss_pred CCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEEEE
Confidence 889999999999999999987766 66788888999988 77 77788888888886
No 54
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=305.21 Aligned_cols=282 Identities=19% Similarity=0.351 Sum_probs=219.3
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEe-ec-CCCceEEE
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCI-RS-RNSKVTCC 513 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l-~~-H~~~V~~l 513 (784)
++...+.+..+.++ ++.+|+.|+.+++|+...+. +..+..+ .+ |.+.|+++
T Consensus 12 ~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~------------------------~~~~~~~~~~~h~~~v~~v 64 (330)
T 2hes_X 12 LYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDD------------------------FTLIDVLDETAHKKAIRSV 64 (330)
T ss_dssp CCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSC------------------------CEEEEEECTTCCCSCEEEE
T ss_pred cCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCC------------------------eEEEEEEecCCccCCEEEE
Confidence 34444566666554 67789999999999773221 1223334 33 99999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCC-------CceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCc---c
Q 047260 514 HFSSDGKLLASSGHDRKVVLWNMDT-------LQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPN---F 583 (784)
Q Consensus 514 ~fspdg~~Lasgs~Dg~I~IWd~~t-------~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~---~ 583 (784)
+|+|++++|++|+.|++|+|||+.. .+.+..+.+|...|++++|+|++++|++|+.|++|+|||+.... .
T Consensus 65 ~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~ 144 (330)
T 2hes_X 65 AWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYE 144 (330)
T ss_dssp EECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCE
T ss_pred EECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeE
Confidence 9999999999999999999999853 35667788999999999999999999999999999999995322 3
Q ss_pred eeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC--eeEEe---ecCCeeEEEEecC--CCEEEEEECCCcE
Q 047260 584 CSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF--LCTHI---TKGGTAQVRFQPR--IGQLLAAASDKVV 656 (784)
Q Consensus 584 ~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~--~~~~~---~~~~v~~v~fsp~--~~~Ll~~s~Dg~I 656 (784)
+...+.+|...|.+++|+|++. +|++++.|+.|++||+... .++.. +...+.++.|+|+ +..|++++.|+.|
T Consensus 145 ~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v 223 (330)
T 2hes_X 145 CISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTV 223 (330)
T ss_dssp EEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCE
T ss_pred EEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeE
Confidence 5567789999999999999976 8889999999999998764 44444 4467899999998 6689999999999
Q ss_pred EEEECCCC--------eEEEEEeC-CCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCc--eEEE-eccCCC-ceEEEE
Q 047260 657 SIFDIETD--------RQTHSLQG-HAELVNYICWDTNGDYLASVS-QNLVKVWSMASGE--CIQE-LSSNGN-QFHSCV 722 (784)
Q Consensus 657 ~IwDl~t~--------~~i~~l~~-h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~--~i~~-l~~~~~-~I~sl~ 722 (784)
++||++.+ .....+.. |...|.+++|++++ +|++++ |+.|+|||..+++ .+.. +..|.. .|.+++
T Consensus 224 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~ 302 (330)
T 2hes_X 224 RVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVK 302 (330)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEE
T ss_pred EEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEE
Confidence 99998754 34455555 89999999999776 566665 5599999998874 3333 356766 899999
Q ss_pred Eec--CCCEEEEEECCCeEEEEECCC
Q 047260 723 FHP--SYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 723 fsp--dg~~L~s~s~dg~I~Iwdl~~ 746 (784)
|+| ++.+|++++.||.|+|||+.+
T Consensus 303 ~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 303 WLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EC-----CCEEEEETTSEEEEEEC--
T ss_pred EecCCCceEEEEecCCCcEEEEEecc
Confidence 999 688999999999999999864
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.9e-33 Score=312.66 Aligned_cols=294 Identities=18% Similarity=0.350 Sum_probs=258.9
Q ss_pred CceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCe
Q 047260 451 DRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRK 530 (784)
Q Consensus 451 ~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~ 530 (784)
..++.+|+.|+.+++|+.... ..+..+.+|.+.|++++|+ +++|++|+.||.
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~--------------------------~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~ 180 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTG--------------------------KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRT 180 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTC--------------------------CEEEECCCCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred CCEEEEEECCCcEEEEECCCC--------------------------cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCe
Confidence 456668999999999976322 2456678899999999998 569999999999
Q ss_pred EEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEE
Q 047260 531 VVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCF 610 (784)
Q Consensus 531 I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~s 610 (784)
|++||+.+++.+..+.+|...|.++.|+ ++.|++|+.||.|++||+.+++ ....+.+|...|.++.| ++ .++++
T Consensus 181 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~v~~~~~--~~-~~l~~ 254 (445)
T 2ovr_B 181 LKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ-CLHVLMGHVAAVRCVQY--DG-RRVVS 254 (445)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC-EEEEEECCSSCEEEEEE--CS-SCEEE
T ss_pred EEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc-EEEEEcCCcccEEEEEE--CC-CEEEE
Confidence 9999999999999999999999999995 5689999999999999999876 66778899999999999 33 37888
Q ss_pred EeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCC
Q 047260 611 CDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGD 687 (784)
Q Consensus 611 gs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~ 687 (784)
++.|+.|++||+++..++..+. ..+.++.| ++..+++++.|+.|++||+++++.+..+.+|...+.++.++ +.
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~ 330 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DN 330 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TT
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CC
Confidence 9999999999999888776655 56778888 78899999999999999999999999999999999988875 66
Q ss_pred EEEEEeCC-eEEEEeCCCCceEEEecc---CCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEE-e-----cccCC
Q 047260 688 YLASVSQN-LVKVWSMASGECIQELSS---NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMT-I-----AAHEN 757 (784)
Q Consensus 688 ~Lasgsdd-~I~IwDl~t~~~i~~l~~---~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~-~-----~~h~~ 757 (784)
+|++++.+ .|++||+++++++..+.. |...|.++.|+ +.+|++++.||.|++||+.+++.+. + ..|.+
T Consensus 331 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 408 (445)
T 2ovr_B 331 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG 408 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCc
Confidence 88888855 999999999999999986 77889999996 5699999999999999999998773 3 37889
Q ss_pred ceEEEEEeCCCCEEEEEECCCc----EEEeC
Q 047260 758 IISALAQSPVTGMVASASHDSS----VKLWK 784 (784)
Q Consensus 758 ~V~slafspdg~~LaSgs~DG~----V~IWd 784 (784)
.|.+++|+|++.+|++|+.||. |.|||
T Consensus 409 ~v~~~~~s~~~~~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 409 VVWRIRASNTKLVCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp EEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred eEEEEEecCCEEEEEEcccCCCCccEEEEEE
Confidence 9999999999999999999998 99996
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-33 Score=335.92 Aligned_cols=288 Identities=17% Similarity=0.269 Sum_probs=246.2
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEE
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHF 515 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~f 515 (784)
+|...+.++.+.++...++.+|+.|++|++|+...... ........+.+|...|++++|
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~---------------------~~~~~~~~~~~h~~~v~~v~~ 438 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK---------------------AYGVAQRRLTGHSHFVEDVVL 438 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT---------------------CSCEEEEEEECCSSCEEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc---------------------ccccccceecCCCCcEEEEEE
Confidence 45555677777777777888999999999998744321 011245678899999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCccee--eeccCCCC
Q 047260 516 SSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCS--QAYTGHSS 593 (784)
Q Consensus 516 spdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~--~~~~~h~~ 593 (784)
+|++++|++|+.||+|+|||+.++..+..+.+|...|++++|+|++++|++|+.|++|+|||+....... ....+|..
T Consensus 439 s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 439 SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD 518 (694)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999987543211 22357889
Q ss_pred CeEEEEEcCCCC-cEEEEEeCCCeEEEEeCCCCeeEEee---cCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE
Q 047260 594 PIMSLDFHPKKT-DLFCFCDNDNEIQYWSINPFLCTHIT---KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS 669 (784)
Q Consensus 594 ~V~sl~~sp~~~-~ll~sgs~dg~I~iwDl~~~~~~~~~---~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~ 669 (784)
.|.+++|+|++. .++++++.|+.|++||++...+...+ .+.+.+++|+|++.+|++++.|+.|++||+++++.+..
T Consensus 519 ~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 519 WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS 598 (694)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC
T ss_pred cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 999999999873 58899999999999999987766554 46789999999999999999999999999999998887
Q ss_pred EeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccCC-------------------CceEEEEEecCCCEE
Q 047260 670 LQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSNG-------------------NQFHSCVFHPSYSTL 730 (784)
Q Consensus 670 l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~-------------------~~I~sl~fspdg~~L 730 (784)
+. +...|.+++|+|++.+|++++++.|+|||+++++++..+..+. ..+.+++|+|++++|
T Consensus 599 ~~-~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l 677 (694)
T 3dm0_A 599 LE-ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 677 (694)
T ss_dssp CB-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEE
T ss_pred ec-CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEE
Confidence 76 4568999999999999999999999999999999888775331 136889999999999
Q ss_pred EEEECCCeEEEEECC
Q 047260 731 LVVGGISSLELWNMA 745 (784)
Q Consensus 731 ~s~s~dg~I~Iwdl~ 745 (784)
++++.||.|+|||+.
T Consensus 678 ~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 678 FSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEETTSEEEEEEC-
T ss_pred EEEcCCCeEEEEecc
Confidence 999999999999985
No 57
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-35 Score=339.75 Aligned_cols=307 Identities=11% Similarity=0.052 Sum_probs=230.3
Q ss_pred eEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCC------CCEEEEEe
Q 047260 453 FADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSD------GKLLASSG 526 (784)
Q Consensus 453 ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspd------g~~Lasgs 526 (784)
++++++.|++|++|+...... .......+.+|.+.|.+++|+|+ +.+||+++
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~----------------------~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s 232 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTL----------------------HCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVS 232 (524)
T ss_dssp -------CEEEEEEEEETTTC----------------------CEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEE
T ss_pred hhccCCCCceEEEEEccCCCC----------------------CceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEe
Confidence 345788999999998743220 11123456778999999999997 57999999
Q ss_pred CCCeEEEEECCCCce-----------eeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCe
Q 047260 527 HDRKVVLWNMDTLQT-----------ESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPI 595 (784)
Q Consensus 527 ~Dg~I~IWd~~t~~~-----------~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V 595 (784)
.||+|+|||+.++.. ...+.+|...|++++|++++ .|++|+.||+|++||++++......+.+|...|
T Consensus 233 ~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V 311 (524)
T 2j04_B 233 QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYI 311 (524)
T ss_dssp TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCE
T ss_pred cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccE
Confidence 999999999986542 23667899999999999864 899999999999999997654556678999999
Q ss_pred EEE--EEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe---ec--CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEE
Q 047260 596 MSL--DFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI---TK--GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTH 668 (784)
Q Consensus 596 ~sl--~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~---~~--~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~ 668 (784)
.+| .|++++..+|++++.|+.|++||+++.++... +. ..+.+++|+|++..+++++.|++|++||++++.++.
T Consensus 312 ~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~ 391 (524)
T 2j04_B 312 LSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVH 391 (524)
T ss_dssp EEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCE
T ss_pred EEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccce
Confidence 999 56777646999999999999999987554322 22 247889999999999999999999999999998888
Q ss_pred EEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEecc-----CCCceEEEEEecCCCEEEEEECCCeEEEE
Q 047260 669 SLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSS-----NGNQFHSCVFHPSYSTLLVVGGISSLELW 742 (784)
Q Consensus 669 ~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~-----~~~~I~sl~fspdg~~L~s~s~dg~I~Iw 742 (784)
.+.+|...|++|+|+|+|.+|++|++| +|+|||+... .+..+.. +...+.+++|+|++..+ ....+-.+..|
T Consensus 392 ~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~-~~~~~~~~~~~ 469 (524)
T 2j04_B 392 PLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKY-RIDSSYEVYPL 469 (524)
T ss_dssp EEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEE-EECCCCCCCC-
T ss_pred eeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeE-EccCCceeccc
Confidence 899999999999999999999999966 9999998654 2222111 11246789999999844 22222223333
Q ss_pred ECCCCceEEecccCCceEEEEEeCCCC---EEEEEECCCcEEEeC
Q 047260 743 NMAENKSMTIAAHENIISALAQSPVTG---MVASASHDSSVKLWK 784 (784)
Q Consensus 743 dl~~~~~~~~~~h~~~V~slafspdg~---~LaSgs~DG~V~IWd 784 (784)
+........+.+|...|.+|+|+|++. .||+|+.||.|+||+
T Consensus 470 ~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 470 TVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp ------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred ccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 333444457889999999999999964 999999999999995
No 58
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-33 Score=310.72 Aligned_cols=299 Identities=18% Similarity=0.322 Sum_probs=237.2
Q ss_pred CCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEc
Q 047260 437 TGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFS 516 (784)
Q Consensus 437 ~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fs 516 (784)
+...+.++.|.++...++ +|+ ++.+++|+..++..... +......... ...........+...|++++|+
T Consensus 63 h~~~V~~v~fspdg~~la-~g~-~~~v~i~~~~~g~~~~~----l~~~~~~~~~----~~~~~~~~~~~~~~~v~~v~~s 132 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLA-TGC-NKTTQVYRVSDGSLVAR----LSDDSAANKD----PENLNTSSSPSSDLYIRSVCFS 132 (393)
T ss_dssp CSSCCCEEEECTTSSEEE-EEC-BSCEEEEETTTCCEEEE----ECC---------------------CCCCBEEEEEEC
T ss_pred CCCEEEEEEECCCCCEEE-EEc-CCcEEEEEecCCCEEEE----ecCccccccc----cccccccccCCCceeEEEEEEC
Confidence 445567778878766554 565 78999998754431111 1110000000 0000111122355679999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeE
Q 047260 517 SDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIM 596 (784)
Q Consensus 517 pdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~ 596 (784)
|+|++|++|+.|+.|+|||+.+++.+..+.+|...|++++|+|++++|++++.|++|++||++++. +...+ .+...+.
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~-~~~~~-~~~~~v~ 210 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ-CSLTL-SIEDGVT 210 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EEEEE-ECSSCEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe-eEEEE-EcCCCcE
Confidence 999999999999999999999999999999999999999999999999999999999999999876 33333 3567899
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee----------cCCeeEEEEecCCCEEEEEECCCcEEEEECCCC--
Q 047260 597 SLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT----------KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETD-- 664 (784)
Q Consensus 597 sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~----------~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~-- 664 (784)
+++|+|....++++++.|+.|++||+++...+..+ ...+.+++|+|++.+|++++.|+.|++||+++.
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN 290 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCC
Confidence 99999955568999999999999999987665443 467899999999999999999999999999763
Q ss_pred ----------eEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEec------CC
Q 047260 665 ----------RQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHP------SY 727 (784)
Q Consensus 665 ----------~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fsp------dg 727 (784)
.+...+.+|...|.+++|+|++.+|++++.| .|++||+.+++++..+.+|...|.+++|++ ++
T Consensus 291 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~ 370 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY 370 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC
T ss_pred cccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCC
Confidence 3456778899999999999999999999966 999999999999999999999999999986 67
Q ss_pred CEEEEEECCCeEEEEECCCC
Q 047260 728 STLLVVGGISSLELWNMAEN 747 (784)
Q Consensus 728 ~~L~s~s~dg~I~Iwdl~~~ 747 (784)
.+|++++.||+|+||++...
T Consensus 371 ~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 371 NVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEEEEETTSEEEEEEEEEC
T ss_pred CEEEEECCCCcEEECccccc
Confidence 89999999999999997643
No 59
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-32 Score=310.53 Aligned_cols=297 Identities=18% Similarity=0.263 Sum_probs=255.7
Q ss_pred ceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeE
Q 047260 452 RFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKV 531 (784)
Q Consensus 452 ~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I 531 (784)
.++.+|+.|+.|++|+.... ..+..+.+|.+.|++++|++++ +|++|+.||+|
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~--------------------------~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i 185 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINK--------------------------KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTV 185 (464)
T ss_dssp TEEEEEETTSCEEEEETTTT--------------------------EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCE
T ss_pred CEEEEEcCCCcEEEEECCCC--------------------------cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCE
Confidence 46678999999999976322 3566778999999999999988 99999999999
Q ss_pred EEEECCCCceeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEcCCCCcce----------------------eee
Q 047260 532 VLWNMDTLQTESTPEDHKSVVTDVRFRP--NSSQLATASVDKSVRLWDAANPNFC----------------------SQA 587 (784)
Q Consensus 532 ~IWd~~t~~~~~~l~~h~~~It~i~fsp--dg~~Latgs~Dg~I~IWdl~~~~~~----------------------~~~ 587 (784)
+|||+.+++.+..+.+|...|.+++|++ ++.+|++++.|++|++||+.+.... ...
T Consensus 186 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred EEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 9999999999999999999999999994 7789999999999999999875422 445
Q ss_pred ccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCC
Q 047260 588 YTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETD 664 (784)
Q Consensus 588 ~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~ 664 (784)
+.+|...|.++.. ++. ++++++.|+.|++||+++.+++..+. ..+.+++|+|++..+++++.|+.|++||++++
T Consensus 266 ~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 266 LRGHMASVRTVSG--HGN-IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp ECCCSSCEEEEEE--ETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred ccCccceEEEEcC--CCC-EEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 6788889988854 443 88899999999999999988876654 67899999999999999999999999999999
Q ss_pred eEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEE
Q 047260 665 RQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWN 743 (784)
Q Consensus 665 ~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwd 743 (784)
+.+..+.+|...|.+++|+ +.+|++++.+ .|++||+.++.....+. +...+..++|++++.++++++ ||.|++||
T Consensus 343 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd 418 (464)
T 3v7d_B 343 ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYN 418 (464)
T ss_dssp EEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEE
T ss_pred cEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEE
Confidence 9999999999999999997 5788888855 99999999988766663 556788899999999999888 89999999
Q ss_pred CCCCceEE--ecccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 744 MAENKSMT--IAAHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 744 l~~~~~~~--~~~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
+.+++.+. ...|...|.+++|+ +..++++++.||.+.+|
T Consensus 419 ~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 419 LRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp TTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred CCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 99999884 56889999999998 34566666777766654
No 60
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.2e-34 Score=359.15 Aligned_cols=320 Identities=20% Similarity=0.372 Sum_probs=275.2
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEE
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHF 515 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~f 515 (784)
++...+.+..+.++...+ .+|+.|+.|++|+.... ..+..+.+|.+.|++++|
T Consensus 613 ~h~~~v~~~~~s~~~~~l-~s~~~d~~i~vw~~~~~--------------------------~~~~~~~~h~~~v~~~~~ 665 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRI-ASCGADKTLQVFKAETG--------------------------EKLLDIKAHEDEVLCCAF 665 (1249)
T ss_dssp CCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTC--------------------------CEEEEECCCSSCEEEEEE
T ss_pred cccccEEEEEECCCCCEE-EEEeCCCeEEEEECCCC--------------------------CEEEEeccCCCCEEEEEE
Confidence 444556677777765554 57889999999976332 245667899999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCC
Q 047260 516 SSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRP--NSSQLATASVDKSVRLWDAANPNFCSQAYTGHSS 593 (784)
Q Consensus 516 spdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fsp--dg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~ 593 (784)
+|++++||+|+.||.|+|||+.+++.+..+.+|...|++++|+| ++.++++|+.|+.|++||+.++. +...+.+|..
T Consensus 666 s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-~~~~~~~h~~ 744 (1249)
T 3sfz_A 666 SSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-CRNTMFGHTN 744 (1249)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-EEEEECCCSS
T ss_pred ecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-hhheecCCCC
Confidence 99999999999999999999999999999999999999999999 56689999999999999999876 6777889999
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe-------------------------------------------
Q 047260 594 PIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI------------------------------------------- 630 (784)
Q Consensus 594 ~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~------------------------------------------- 630 (784)
.|.+++|+|++. ++++++.||.|++||+++......
T Consensus 745 ~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~ 823 (1249)
T 3sfz_A 745 SVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLL 823 (1249)
T ss_dssp CEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEE
T ss_pred CEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEE
Confidence 999999999987 788899999999999875433221
Q ss_pred ---------------ecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC
Q 047260 631 ---------------TKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN 695 (784)
Q Consensus 631 ---------------~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd 695 (784)
+...+.+++|+|++..+++++.|+.|++||+.++..+..+.+|...|.+++|+|++.+|++++.+
T Consensus 824 ~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~d 903 (1249)
T 3sfz_A 824 FDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDD 903 (1249)
T ss_dssp EETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCC
Confidence 23467788999999999999999999999999999999999999999999999999999999866
Q ss_pred -eEEEEeCCCCce-----------------------------EEEe--------ccCCCceEEEEEecCCCEEEEEECCC
Q 047260 696 -LVKVWSMASGEC-----------------------------IQEL--------SSNGNQFHSCVFHPSYSTLLVVGGIS 737 (784)
Q Consensus 696 -~I~IwDl~t~~~-----------------------------i~~l--------~~~~~~I~sl~fspdg~~L~s~s~dg 737 (784)
.|++||+.+... +..+ ..+...+.+++|+|++.++++++.+|
T Consensus 904 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g 983 (1249)
T 3sfz_A 904 QTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDG 983 (1249)
T ss_dssp SCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTS
T ss_pred CeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCC
Confidence 999999753100 0000 12345789999999999999999999
Q ss_pred eEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 738 SLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 738 ~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.|++||+.+++.. .+.+|...|++++|+|++++|++++.||.|++||
T Consensus 984 ~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd 1031 (1249)
T 3sfz_A 984 AIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN 1031 (1249)
T ss_dssp CCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEE
T ss_pred CEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 9999999998876 6678999999999999999999999999999996
No 61
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-34 Score=325.90 Aligned_cols=282 Identities=20% Similarity=0.288 Sum_probs=228.9
Q ss_pred EeEeecCCCceEEEEEcC-CCCEEEEEeCCCeEEEEECCCCce--eeecCCCCCCeEEEEEcc-CCCEEEEEeCCCeEEE
Q 047260 500 VGCIRSRNSKVTCCHFSS-DGKLLASSGHDRKVVLWNMDTLQT--ESTPEDHKSVVTDVRFRP-NSSQLATASVDKSVRL 575 (784)
Q Consensus 500 i~~l~~H~~~V~~l~fsp-dg~~Lasgs~Dg~I~IWd~~t~~~--~~~l~~h~~~It~i~fsp-dg~~Latgs~Dg~I~I 575 (784)
.....+|...|+||+|+| ++++||+|+.||.|+|||+.++.. ...+.+|.+.|++|+|+| ++.+|++|+.||+|+|
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 345677999999999999 567999999999999999987654 445668999999999998 7899999999999999
Q ss_pred EcCCCCcceeeec--cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee--EEeecCCeeEEEEecCCC-EEEEE
Q 047260 576 WDAANPNFCSQAY--TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC--THITKGGTAQVRFQPRIG-QLLAA 650 (784)
Q Consensus 576 Wdl~~~~~~~~~~--~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~--~~~~~~~v~~v~fsp~~~-~Ll~~ 650 (784)
||+++.. ..... ..+...+.+++|+|++. +|++|+.||.|++||++.... +..+...|.+++|+|++. .++++
T Consensus 192 wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 192 QDFKGNI-LRVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EETTSCE-EEEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eeccCCc-eeEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEe
Confidence 9998654 22222 23445688999999987 888999999999999975332 234557899999999987 56678
Q ss_pred ECCCcEEEEECCCCeEEEE---EeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCC------ceEE
Q 047260 651 ASDKVVSIFDIETDRQTHS---LQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGN------QFHS 720 (784)
Q Consensus 651 s~Dg~I~IwDl~t~~~i~~---l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~------~I~s 720 (784)
+.|+.|+|||+++.+.... ..+|...|++++|+|+|.+|++++.| .|+|||+.++++...+..|.. .+..
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE
Confidence 8899999999988654333 35699999999999999999999865 999999999988888766543 2345
Q ss_pred EEEecCCCEEEEEEC------------CCeEEEEECCCCceE-Ee-cccCCceEEE-EEeCCCCEEEEEECCCcEEEeC
Q 047260 721 CVFHPSYSTLLVVGG------------ISSLELWNMAENKSM-TI-AAHENIISAL-AQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 721 l~fspdg~~L~s~s~------------dg~I~Iwdl~~~~~~-~~-~~h~~~V~sl-afspdg~~LaSgs~DG~V~IWd 784 (784)
+.|+|++..++++.. ++.|++||..+++.+ .+ ..|...|.++ +|+|++.+|++|+ |+.|+|||
T Consensus 350 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~ 427 (435)
T 4e54_B 350 AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWS 427 (435)
T ss_dssp CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECC
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEE
Confidence 678888877777653 247999999999887 33 4688888887 6999999999876 88999997
No 62
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.6e-33 Score=310.57 Aligned_cols=269 Identities=20% Similarity=0.374 Sum_probs=233.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeec--CCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceee
Q 047260 509 KVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTP--EDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l--~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~ 586 (784)
.+++|+||++ ++||+|. |++|+|||+.+++....+ .+|...|++|+|+|++++|++|+.||+|+|||+++++ ...
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~-~~~ 183 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-RLR 183 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc-EEE
Confidence 3678999975 5788765 999999999999887655 4678899999999999999999999999999999876 677
Q ss_pred eccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee----EEeecCCeeEEEEecCCCEEEEEECCCcEEEEECC
Q 047260 587 AYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC----THITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIE 662 (784)
Q Consensus 587 ~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~----~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~ 662 (784)
.+.+|...|.++.+++ .++++++.|+.+++||...... +..+...+..+.++|++..+++++.|+.|++||..
T Consensus 184 ~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 184 NMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 8889999999999874 3899999999999999886322 23455788999999999999999999999999998
Q ss_pred CCe----EEEEEeCCCCCEEEEEEcCCCC-EEEEEe---CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEE
Q 047260 663 TDR----QTHSLQGHAELVNYICWDTNGD-YLASVS---QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 663 t~~----~i~~l~~h~~~V~sl~~spdg~-~Lasgs---dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s 734 (784)
+++ .+.....|...|.+++|+|++. ++++++ |++|+|||+.+++++..+..+ ..+.++.|++++..+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGH 339 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEE
Confidence 764 4566778999999999999654 555543 459999999999999888765 6789999999999998876
Q ss_pred --CCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 735 --GISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 735 --~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.|+.|+|||+.+++++ .+.+|.+.|++|+|+||+.+|+||+.||+|+|||
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 5799999999999887 7789999999999999999999999999999997
No 63
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-33 Score=310.85 Aligned_cols=278 Identities=18% Similarity=0.299 Sum_probs=240.6
Q ss_pred EeEeecCCCceE--EEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCC-CCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q 047260 500 VGCIRSRNSKVT--CCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPED-HKSVVTDVRFRPNSSQLATASVDKSVRLW 576 (784)
Q Consensus 500 i~~l~~H~~~V~--~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~-h~~~It~i~fspdg~~Latgs~Dg~I~IW 576 (784)
+....+|...+. +++|+ +..+++++.|+.|+|||+.+++....+.. |...|++++|+|++++|++|+.||.|++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp EEECTTCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeCCCCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEE
Confidence 333446766644 45555 45688889999999999999988877765 88999999999999999999999999999
Q ss_pred cCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-CeeE---EeecCCeeEEEEecCCCEEEEEEC
Q 047260 577 DAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP-FLCT---HITKGGTAQVRFQPRIGQLLAAAS 652 (784)
Q Consensus 577 dl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~-~~~~---~~~~~~v~~v~fsp~~~~Ll~~s~ 652 (784)
|+.+++ ....+.+|...|.+++|++ .++++++.||.|++||++. .... ..+...+.+++|+|++..|++++.
T Consensus 162 d~~~~~-~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 162 DVESQT-KLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp ETTTCC-EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ECcCCe-EEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 999876 6677789999999999954 3899999999999999983 3333 345578999999999999999999
Q ss_pred CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCC-CEEEEEe---CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCC
Q 047260 653 DKVVSIFDIETDRQTHSLQGHAELVNYICWDTNG-DYLASVS---QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYS 728 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg-~~Lasgs---dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~ 728 (784)
|+.|++||+++++.+..+..|...|.+++|+|++ .++++++ ++.|++||+.+++++..+. +...|.+++|+|++.
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSK 316 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSS
T ss_pred CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCC
Confidence 9999999999999999999999999999999976 5666665 5599999999999998886 557899999999999
Q ss_pred EEEEEE--CCCeEEEEECCCCceE---EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 729 TLLVVG--GISSLELWNMAENKSM---TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 729 ~L~s~s--~dg~I~Iwdl~~~~~~---~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+|++++ .||.|++||+.++... .+.+|...|.+++|+|++.+|++++.||.|+|||
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 999965 7999999999987654 4668999999999999999999999999999996
No 64
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-33 Score=344.41 Aligned_cols=200 Identities=12% Similarity=0.101 Sum_probs=165.9
Q ss_pred CCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcC
Q 047260 438 GSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSS 517 (784)
Q Consensus 438 ~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fsp 517 (784)
..-+.+..|.++. .++++|+.|+.|++|+.... ..+ ....|...|++++|+|
T Consensus 17 ~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~~--------------------------~~~-~~~~~~~~V~~l~fsp 68 (902)
T 2oaj_A 17 SSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQV--------------------------EVV-IKLEDRSAIKEMRFVK 68 (902)
T ss_dssp SSCEEEEEEETTT-TEEEEEETTSEEEEECSTTC--------------------------EEE-EECSSCCCEEEEEEET
T ss_pred CCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCCc--------------------------EEE-EEcCCCCCEEEEEEcC
Confidence 3446677777765 45668999999999954110 111 1234788999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCccee----------ee
Q 047260 518 DGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCS----------QA 587 (784)
Q Consensus 518 dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~----------~~ 587 (784)
+++|++++.|++|+|||+.+++.+..+. |...|++++|+|++++|++|+.||+|++||+++..... ..
T Consensus 69 -g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~ 146 (902)
T 2oaj_A 69 -GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFF 146 (902)
T ss_dssp -TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTC
T ss_pred -CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccc
Confidence 8899999999999999999999888885 77899999999999999999999999999999865321 23
Q ss_pred ccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---------------------CCeeEEEEecCCCE
Q 047260 588 YTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---------------------GGTAQVRFQPRIGQ 646 (784)
Q Consensus 588 ~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---------------------~~v~~v~fsp~~~~ 646 (784)
+.+|.+.|.+++|+|++..++++++.|+.| +||+++.+++..+. ..+.+++|+|++.+
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~ 225 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH 225 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE
Confidence 467999999999999876788999999999 99999988776554 45899999999999
Q ss_pred EEEEECCCcEEEEECCCCeEEE
Q 047260 647 LLAAASDKVVSIFDIETDRQTH 668 (784)
Q Consensus 647 Ll~~s~Dg~I~IwDl~t~~~i~ 668 (784)
|++++.|+.|++||+++++++.
T Consensus 226 lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 226 IITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp EEEEETTCCEEEEETTTCCEEE
T ss_pred EEEEECCCeEEEEECCCCcEEE
Confidence 9999999999999998766543
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.6e-33 Score=338.58 Aligned_cols=318 Identities=17% Similarity=0.275 Sum_probs=271.6
Q ss_pred CcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCC
Q 047260 439 SLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSD 518 (784)
Q Consensus 439 ~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspd 518 (784)
..+.++.+.++... +.+|+.|+.|.+|+.... ..+..+.+|.+.|++++|+|+
T Consensus 14 ~~v~~i~~sp~~~~-la~~~~~g~v~iwd~~~~--------------------------~~~~~~~~~~~~v~~~~~s~~ 66 (814)
T 3mkq_A 14 DRVKGIDFHPTEPW-VLTTLYSGRVEIWNYETQ--------------------------VEVRSIQVTETPVRAGKFIAR 66 (814)
T ss_dssp SCEEEEEECSSSSE-EEEEETTSEEEEEETTTT--------------------------EEEEEEECCSSCEEEEEEEGG
T ss_pred CceEEEEECCCCCE-EEEEeCCCEEEEEECCCC--------------------------ceEEEEecCCCcEEEEEEeCC
Confidence 34566667676554 456888999999976321 245677889999999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEE
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSL 598 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl 598 (784)
+++|++|+.||.|+|||+.+++.+..+..|...|++++|+|++++|++++.||.|++||+.++......+.+|...|.++
T Consensus 67 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999998766778888999999999
Q ss_pred EEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec----CCeeEEEEec--CCCEEEEEECCCcEEEEECCCCeEEEEEeC
Q 047260 599 DFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK----GGTAQVRFQP--RIGQLLAAASDKVVSIFDIETDRQTHSLQG 672 (784)
Q Consensus 599 ~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~----~~v~~v~fsp--~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~ 672 (784)
+|+|++..++++++.||.|++||++......... ..+.+++|+| ++..+++++.||.|++||+++++.+..+.+
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 226 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG 226 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 9999555588999999999999998654443332 6789999999 999999999999999999999999999999
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCE-EEEEECCCeEEEEECCCCceE
Q 047260 673 HAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYST-LLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 673 h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~-L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
|...|.+++|+|++.+|++++.+ .|++||+.+++.+..+..+...+.+++|+|++.. +++++.++.+.+|++......
T Consensus 227 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (814)
T 3mkq_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPT 306 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCC
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCce
Confidence 99999999999999999999855 9999999999999999999999999999999874 355666777888887643211
Q ss_pred --------------------------------------------EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 751 --------------------------------------------TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 751 --------------------------------------------~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
....+...+.+++|+|++++|++++ ||.+.||+
T Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~ 383 (814)
T 3mkq_A 307 LSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYT 383 (814)
T ss_dssp EEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred eEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEE
Confidence 1123445678999999999999888 88899885
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.2e-33 Score=304.45 Aligned_cols=272 Identities=16% Similarity=0.137 Sum_probs=237.4
Q ss_pred EeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---eeeecCCCCCCeEEEEEccCCC-EEEEEeCCCeEEE
Q 047260 500 VGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ---TESTPEDHKSVVTDVRFRPNSS-QLATASVDKSVRL 575 (784)
Q Consensus 500 i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~---~~~~l~~h~~~It~i~fspdg~-~Latgs~Dg~I~I 575 (784)
+....+|.+.|++++|+|++++|++++.||.|+|||+.++. ....+..|...|++++|+|+++ +|++++.||.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 33456799999999999999999999999999999998877 3445558999999999999999 9999999999999
Q ss_pred EcC-CCCcceeeeccC--CCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC---------CeeEEe--ecCCeeEEEEe
Q 047260 576 WDA-ANPNFCSQAYTG--HSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP---------FLCTHI--TKGGTAQVRFQ 641 (784)
Q Consensus 576 Wdl-~~~~~~~~~~~~--h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~---------~~~~~~--~~~~v~~v~fs 641 (784)
||+ .++. ...+.+ |...|.+++|+| + .++++++.|+.|++||+++ .+++.. +...+.+++|+
T Consensus 84 wd~~~~~~--~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 159 (342)
T 1yfq_A 84 VDLIGSPS--FQALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN 159 (342)
T ss_dssp ECSSSSSS--EEECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC
T ss_pred EEeccCCc--eEeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEec
Confidence 999 7765 356677 999999999999 4 4888999999999999876 443322 45788999999
Q ss_pred cCCCEEEEEECCCcEEEEECCC-Ce--EEEEEeCCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEeCCCC------ceEEE
Q 047260 642 PRIGQLLAAASDKVVSIFDIET-DR--QTHSLQGHAELVNYICWDT-NGDYLASVSQN-LVKVWSMASG------ECIQE 710 (784)
Q Consensus 642 p~~~~Ll~~s~Dg~I~IwDl~t-~~--~i~~l~~h~~~V~sl~~sp-dg~~Lasgsdd-~I~IwDl~t~------~~i~~ 710 (784)
+++ +++++.|+.|++||+++ +. .......|...|.+++|+| ++.+|++++.+ .|+|||+... +.+..
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 886 99999999999999998 53 3344456888999999999 99999999866 9999999887 78888
Q ss_pred eccCCC---------ceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-Eeccc-CCceEEEEEeCCCCEEEEEECCCc
Q 047260 711 LSSNGN---------QFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAH-ENIISALAQSPVTGMVASASHDSS 779 (784)
Q Consensus 711 l~~~~~---------~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h-~~~V~slafspdg~~LaSgs~DG~ 779 (784)
+..|.. .|.+++|+|++++|++++.||.|++||+.+++.+ .+..| ...|.+++ |++.+|++++.||.
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 888755 9999999999999999999999999999998877 66677 99999999 99999999999998
No 67
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=304.44 Aligned_cols=285 Identities=17% Similarity=0.237 Sum_probs=238.6
Q ss_pred ceeEEeEeecCCCceEEEEEcCC---CCEEEEEeCCCeEEEEECCC-Ccee-eecCCCCCCeEEEEEccCCCEEEEEeCC
Q 047260 496 TFCEVGCIRSRNSKVTCCHFSSD---GKLLASSGHDRKVVLWNMDT-LQTE-STPEDHKSVVTDVRFRPNSSQLATASVD 570 (784)
Q Consensus 496 ~~~~i~~l~~H~~~V~~l~fspd---g~~Lasgs~Dg~I~IWd~~t-~~~~-~~l~~h~~~It~i~fspdg~~Latgs~D 570 (784)
++..+..+.+|.+.|+|++|+|+ |++|++|+.||.|+|||+.+ +..+ ..+.+|...|++++|+|++++|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 44567788999999999999999 69999999999999999997 5544 7788999999999999999999999999
Q ss_pred CeEEEEcCCCCcceeeeccCCCCCeEEEEE--cCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEE
Q 047260 571 KSVRLWDAANPNFCSQAYTGHSSPIMSLDF--HPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLL 648 (784)
Q Consensus 571 g~I~IWdl~~~~~~~~~~~~h~~~V~sl~~--sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll 648 (784)
|.|++||++++. .. .+..|...|.+++| ++++. +|++++.|+.|++||+++.+.+..+......+++......++
T Consensus 108 g~v~iwd~~~~~-~~-~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (368)
T 3mmy_A 108 KTAKMWDLSSNQ-AI-QIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAV 184 (368)
T ss_dssp SEEEEEETTTTE-EE-EEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEE
T ss_pred CcEEEEEcCCCC-ce-eeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeE
Confidence 999999999876 33 35679999999999 77765 788899999999999998877776665555555555567899
Q ss_pred EEECCCcEEEEECCCCeEEEEEe--CCCCCEEEEEEcCCCCE----EEEEeCC-eEEEEeCCCC---ceEEEeccCCC--
Q 047260 649 AAASDKVVSIFDIETDRQTHSLQ--GHAELVNYICWDTNGDY----LASVSQN-LVKVWSMASG---ECIQELSSNGN-- 716 (784)
Q Consensus 649 ~~s~Dg~I~IwDl~t~~~i~~l~--~h~~~V~sl~~spdg~~----Lasgsdd-~I~IwDl~t~---~~i~~l~~~~~-- 716 (784)
+++.++.+.+||++......... .+...+.++++.++... +++++.+ .|++||++.. ..+..+..|..
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG 264 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence 99999999999998875443322 24456677777665543 7777755 9999999987 56777777765
Q ss_pred ----------ceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 717 ----------QFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 717 ----------~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
.|.+++|+|++.+|++++.||.|++||+.+++.+ .+..|...|++++|+|++.+|++++.|+..+.|
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred ccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccc
Confidence 6999999999999999999999999999998877 667899999999999999999999998865444
No 68
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.8e-33 Score=338.21 Aligned_cols=284 Identities=17% Similarity=0.298 Sum_probs=254.7
Q ss_pred eEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 498 CEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 498 ~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
...+.+.+|.+.|+|++|+|++++||+|+.||.|+|||+.+++.+..+..|...|++++|+|++++|++++.||.|+|||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC-eeEEe---ecCCeeEEEEec-CCCEEEEEEC
Q 047260 578 AANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF-LCTHI---TKGGTAQVRFQP-RIGQLLAAAS 652 (784)
Q Consensus 578 l~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~-~~~~~---~~~~v~~v~fsp-~~~~Ll~~s~ 652 (784)
+.+++ ....+.+|...|.+++|+|++. .+++++.||.|++||+++. ..... +...+.+++|+| ++..+++++.
T Consensus 84 ~~~~~-~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 84 YNTGE-KVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp TTTCC-EEEEEECCSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred CCCCc-EEEEEecCCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 99876 6677788999999999999987 6778999999999999875 44333 457799999999 7889999999
Q ss_pred CCcEEEEECCCCeEEEEEeCCC-CCEEEEEEcC--CCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCC
Q 047260 653 DKVVSIFDIETDRQTHSLQGHA-ELVNYICWDT--NGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYS 728 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~l~~h~-~~V~sl~~sp--dg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~ 728 (784)
||.|++||++++.....+..+. ..+.+++|+| ++.+|++++.+ .|++||+.+++++..+..|...|.+++|+|++.
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 9999999999888777777655 8999999999 99999999866 999999999999999999999999999999999
Q ss_pred EEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCC--EEEEEECCCcEEEeC
Q 047260 729 TLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTG--MVASASHDSSVKLWK 784 (784)
Q Consensus 729 ~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~--~LaSgs~DG~V~IWd 784 (784)
+|++++.||.|++||+.+++.. .+..|...|.+++|+|++. ++++++ |+.+.+|+
T Consensus 242 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~ 299 (814)
T 3mkq_A 242 IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLS 299 (814)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEE
Confidence 9999999999999999998877 6678889999999999987 455555 55566663
No 69
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5e-33 Score=296.93 Aligned_cols=246 Identities=19% Similarity=0.311 Sum_probs=210.6
Q ss_pred eEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCC--CceeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCeEEEE
Q 047260 501 GCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDT--LQTESTPEDHKSVVTDVRFRP--NSSQLATASVDKSVRLW 576 (784)
Q Consensus 501 ~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t--~~~~~~l~~h~~~It~i~fsp--dg~~Latgs~Dg~I~IW 576 (784)
..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+ .+.+..+.+|.+.|++++|++ ++++|++|+.|++|+||
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45678999999999999999999999999999999974 467788999999999999986 48999999999999999
Q ss_pred cCCCCc-ceeeeccCCCCCeEEEEEcCCC-CcEEEEEeCCCeEEEEeCCCCe-----eEEeecCCeeEEEEecC------
Q 047260 577 DAANPN-FCSQAYTGHSSPIMSLDFHPKK-TDLFCFCDNDNEIQYWSINPFL-----CTHITKGGTAQVRFQPR------ 643 (784)
Q Consensus 577 dl~~~~-~~~~~~~~h~~~V~sl~~sp~~-~~ll~sgs~dg~I~iwDl~~~~-----~~~~~~~~v~~v~fsp~------ 643 (784)
|++++. .....+.+|...|.+++|+|+. ..+|++++.|+.|++||++... ....+...+.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998764 2445567899999999999973 3488899999999999998642 23445678999999997
Q ss_pred -------CCEEEEEECCCcEEEEECCCCe----EEEEEeCCCCCEEEEEEcCCC---CEEEEEeCC-eEEEEeCCCCc--
Q 047260 644 -------IGQLLAAASDKVVSIFDIETDR----QTHSLQGHAELVNYICWDTNG---DYLASVSQN-LVKVWSMASGE-- 706 (784)
Q Consensus 644 -------~~~Ll~~s~Dg~I~IwDl~t~~----~i~~l~~h~~~V~sl~~spdg---~~Lasgsdd-~I~IwDl~t~~-- 706 (784)
+..|++++.|+.|++||+++++ ....+.+|...|.+++|+|++ .+|++++.| +|+|||+++..
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 4689999999999999998765 667888999999999999985 789999866 99999998753
Q ss_pred -eEEEe--ccCCCceEEEEEecCCCEEEEEECCCeEEEEECCC
Q 047260 707 -CIQEL--SSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 707 -~i~~l--~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~ 746 (784)
....+ ..+...|.+++|+|++++|++++.|+.|+||+...
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 22233 45678899999999999999999999999999763
No 70
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.6e-34 Score=315.68 Aligned_cols=272 Identities=15% Similarity=0.174 Sum_probs=234.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeec
Q 047260 509 KVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAY 588 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~ 588 (784)
.+++++|+|++++|++++.|+.|++||+.+++....+..| ..+....|++++++|++++.||.|+|||+.++. ....+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~ 135 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL-QREID 135 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE-EEEET
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc-eeeec
Confidence 3557899999999999999999999999988877777666 445556789999999999999999999999765 66777
Q ss_pred cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe---ecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCe
Q 047260 589 TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI---TKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDR 665 (784)
Q Consensus 589 ~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~---~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~ 665 (784)
.+|...|.+++|+|++. +|++++.|+.|++||+++.+.+.. +...+.+++|+|++..|++++.|+.|++||+++++
T Consensus 136 ~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 89999999999999977 888999999999999987655444 45789999999999999999999999999999999
Q ss_pred EEEEEeC---CCCCEEEEE---------------------EcCCCCEEEEEeCC-eEEEEeCCCCceEEEec-cCCCceE
Q 047260 666 QTHSLQG---HAELVNYIC---------------------WDTNGDYLASVSQN-LVKVWSMASGECIQELS-SNGNQFH 719 (784)
Q Consensus 666 ~i~~l~~---h~~~V~sl~---------------------~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~-~~~~~I~ 719 (784)
.+..+.. +...|.+++ |+|++++|++++.+ .|++||+++++.+..+. .|...|.
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 294 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCN 294 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCce
Confidence 9988875 444555555 57889999999866 99999999998877775 4778999
Q ss_pred EEEEecCCC-EEEEEECCCeEEEEECCCCce--EEecc-cCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 720 SCVFHPSYS-TLLVVGGISSLELWNMAENKS--MTIAA-HENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 720 sl~fspdg~-~L~s~s~dg~I~Iwdl~~~~~--~~~~~-h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+++|+|++. +|++++.||.|++||+.+++. ..+.. |...|.++.| +++++|++++.||.|+|||
T Consensus 295 ~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 295 SLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEE
T ss_pred eEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEe
Confidence 999999999 999999999999999998754 35554 6778888865 5788999999999999996
No 71
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=302.97 Aligned_cols=283 Identities=19% Similarity=0.344 Sum_probs=235.7
Q ss_pred EeEeecCCCceEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeecC-------------CCCCCeEEEEEcc-CCCEE
Q 047260 500 VGCIRSRNSKVTCCHFSS-DGKLLASSGHDRKVVLWNMDTLQTESTPE-------------DHKSVVTDVRFRP-NSSQL 564 (784)
Q Consensus 500 i~~l~~H~~~V~~l~fsp-dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~-------------~h~~~It~i~fsp-dg~~L 564 (784)
...+.+|.+.|++++|+| ++++|++|+.||.|+|||+.++.....+. +|...|++++|+| ++.+|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 345677999999999999 99999999999999999999876655543 5999999999999 78899
Q ss_pred EEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCC--cEEEEEeCCCeEEEEeCCCCeeEEee---cCCeeEEE
Q 047260 565 ATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKT--DLFCFCDNDNEIQYWSINPFLCTHIT---KGGTAQVR 639 (784)
Q Consensus 565 atgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~--~ll~sgs~dg~I~iwDl~~~~~~~~~---~~~v~~v~ 639 (784)
++++.||.|++||+.++. ....+ .+...+.++.|++.+. .++++++.++.|++||+++...+..+ ...+.+++
T Consensus 116 ~s~~~d~~i~iwd~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQ-TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEEETTSEEEEEETTTTE-EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEeCCCeEEEeeCCCCc-cceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 999999999999999866 33333 3678899999998644 38889999999999999977655444 46789999
Q ss_pred EecCCCE-EEEEECCCcEEEEECCCCe-EEEEE---------------eCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEe
Q 047260 640 FQPRIGQ-LLAAASDKVVSIFDIETDR-QTHSL---------------QGHAELVNYICWDTNGDYLASVSQN-LVKVWS 701 (784)
Q Consensus 640 fsp~~~~-Ll~~s~Dg~I~IwDl~t~~-~i~~l---------------~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwD 701 (784)
|+|++.+ +++++.||.|++||++++. .+..+ ..|...|.+++|+|++.+|++++.+ .|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 9999985 8899999999999998765 44444 4688899999999999999999865 999999
Q ss_pred CCCCceEEEeccC-----CCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEE
Q 047260 702 MASGECIQELSSN-----GNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASAS 775 (784)
Q Consensus 702 l~t~~~i~~l~~~-----~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs 775 (784)
+.+++.+..+..+ ...+...........+++++.++.|++||+.+++.+ .+.+|...|++++|+|++.+|++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 274 SSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS 353 (408)
T ss_dssp TTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC
Confidence 9998765544322 122222333344566888888999999999999887 6678999999999999999999999
Q ss_pred CCCcEEEeC
Q 047260 776 HDSSVKLWK 784 (784)
Q Consensus 776 ~DG~V~IWd 784 (784)
.||.|+|||
T Consensus 354 ~dg~i~iw~ 362 (408)
T 4a11_B 354 RDCNILAWV 362 (408)
T ss_dssp TTSCEEEEE
T ss_pred CCCeEEEEe
Confidence 999999996
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.4e-33 Score=350.85 Aligned_cols=283 Identities=22% Similarity=0.413 Sum_probs=260.2
Q ss_pred eEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCC
Q 047260 501 GCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAAN 580 (784)
Q Consensus 501 ~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~ 580 (784)
..+.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++.+..+.+|...|++++|+|++++|++++.|+.|+|||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcceeeeccCCCCCeEEEEEcCCC-CcEEEEEeCCCeEEEEeCCCCeeEEee---cCCeeEEEEecCCCEEEEEECCCcE
Q 047260 581 PNFCSQAYTGHSSPIMSLDFHPKK-TDLFCFCDNDNEIQYWSINPFLCTHIT---KGGTAQVRFQPRIGQLLAAASDKVV 656 (784)
Q Consensus 581 ~~~~~~~~~~h~~~V~sl~~sp~~-~~ll~sgs~dg~I~iwDl~~~~~~~~~---~~~v~~v~fsp~~~~Ll~~s~Dg~I 656 (784)
++ ....+.+|...|.+++|+|++ ..++++++.|+.|++||+++..+...+ ...+.+++|+|++..+++++.||.|
T Consensus 689 ~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 689 GK-LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp CC-EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred Cc-eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeE
Confidence 76 677788999999999999963 458889999999999999988777654 4678999999999999999999999
Q ss_pred EEEECCCCeEEEEEeC-------------CCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEec-cCCCceEEEE
Q 047260 657 SIFDIETDRQTHSLQG-------------HAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELS-SNGNQFHSCV 722 (784)
Q Consensus 657 ~IwDl~t~~~i~~l~~-------------h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~-~~~~~I~sl~ 722 (784)
++||+++++....+.. +...+.+++|+|+|.++++++++.|.+||+.++..+..+. .|...|.+++
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 9999999887776642 2337889999999999999999999999999998888776 7889999999
Q ss_pred EecCCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 723 FHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 723 fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
|+|++.++++++.|+.|++||+.++... .+.+|...|.+++|+|++.+|++++.||.|++||
T Consensus 848 ~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 848 FSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp ECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 9999999999999999999999998877 6779999999999999999999999999999996
No 73
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-32 Score=288.76 Aligned_cols=268 Identities=20% Similarity=0.376 Sum_probs=228.5
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeec--CCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeee
Q 047260 510 VTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTP--EDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 510 V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l--~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~ 587 (784)
+++|+||+++ +||+| .|++|+|||+.+++.+..+ .+|...|++++|+|++++|++|+.||+|+|||+++++ +...
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~-~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-RLRN 104 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce-eEEE
Confidence 5789999886 77776 4999999999999988765 4678889999999999999999999999999999876 6777
Q ss_pred ccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee----EEeecCCeeEEEEecCCCEEEEEECCCcEEEEECCC
Q 047260 588 YTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC----THITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIET 663 (784)
Q Consensus 588 ~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~----~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t 663 (784)
+.+|...+.++.+.+. ++++++.++.+++|+...... ...+...+..+.+.+++.++++++.|+.|++||+++
T Consensus 105 ~~~h~~~~~~~~~~~~---~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 105 MTSHSARVGSLSWNSY---ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EECCSSCEEEEEEETT---EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred ecCccceEEEeecCCC---EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 8899999988877643 899999999999999986432 233457788999999999999999999999999987
Q ss_pred Ce----EEEEEeCCCCCEEEEEEcCCCCE-EEEE--eC-CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEE-
Q 047260 664 DR----QTHSLQGHAELVNYICWDTNGDY-LASV--SQ-NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVG- 734 (784)
Q Consensus 664 ~~----~i~~l~~h~~~V~sl~~spdg~~-Lasg--sd-d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s- 734 (784)
++ .......+...|.++.++|++.. +..+ +. +.|++||.......... .+...+..+.|+|++..+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEEC
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEE
Confidence 64 34455668889999999997653 3333 33 39999999988877665 4557799999999999988776
Q ss_pred -CCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 735 -GISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 735 -~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.|+.|+|||+.+++.+ .+.+|.+.|++++|+|++++|+||+.||+|+|||
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 6899999999999887 7789999999999999999999999999999997
No 74
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.3e-33 Score=299.81 Aligned_cols=282 Identities=14% Similarity=0.191 Sum_probs=214.6
Q ss_pred EeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCC----ceeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCeEEE
Q 047260 502 CIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTL----QTESTPEDHKSVVTDVRFRP--NSSQLATASVDKSVRL 575 (784)
Q Consensus 502 ~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~----~~~~~l~~h~~~It~i~fsp--dg~~Latgs~Dg~I~I 575 (784)
.+.+|.+.|++++|+|++++||+|+.||.|+|||+.++ +....+.+|...|++++|+| ++++|++++.||.|+|
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 46789999999999999999999999999999999876 46677789999999999999 6999999999999999
Q ss_pred EcCCCCc--------ceeeeccCCCCCeEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCeeEE----------------
Q 047260 576 WDAANPN--------FCSQAYTGHSSPIMSLDFHPK--KTDLFCFCDNDNEIQYWSINPFLCTH---------------- 629 (784)
Q Consensus 576 Wdl~~~~--------~~~~~~~~h~~~V~sl~~sp~--~~~ll~sgs~dg~I~iwDl~~~~~~~---------------- 629 (784)
||++++. .....+.+|...|.+++|+|+ +. ++++++.|+.|++||+++...+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9998763 346677789999999999998 55 78889999999999998654321
Q ss_pred eecCCeeEEEEecC---CCEEEEEECCCcEEEEECCCCeE--EEEEeCCCCCEEEEEEcCCC----CEEEEEeCC-eEEE
Q 047260 630 ITKGGTAQVRFQPR---IGQLLAAASDKVVSIFDIETDRQ--THSLQGHAELVNYICWDTNG----DYLASVSQN-LVKV 699 (784)
Q Consensus 630 ~~~~~v~~v~fsp~---~~~Ll~~s~Dg~I~IwDl~t~~~--i~~l~~h~~~V~sl~~spdg----~~Lasgsdd-~I~I 699 (784)
.+...+.++.|+|+ +..+++++.++.+.+|+...++. +..+.+|...|++++|+|++ .+|++++.+ .|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 23357889999997 89999999999998888887765 67778899999999999998 789998865 9999
Q ss_pred EeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECC----CeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEE
Q 047260 700 WSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGI----SSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASA 774 (784)
Q Consensus 700 wDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~d----g~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSg 774 (784)
||++.+........+...+....+.+....+..+..+ ..+.+|+....+.+ .+.+|...|++++|+|++++|+++
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe
Confidence 9999876655544444444444445544444444333 34555555555544 667899999999999999999999
Q ss_pred ECCCcEEEeC
Q 047260 775 SHDSSVKLWK 784 (784)
Q Consensus 775 s~DG~V~IWd 784 (784)
+.||.|+|||
T Consensus 325 ~~dg~v~iw~ 334 (351)
T 3f3f_A 325 GDDGKVRLWK 334 (351)
T ss_dssp ETTSCEEEEE
T ss_pred cCCCcEEEEe
Confidence 9999999996
No 75
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.3e-33 Score=304.55 Aligned_cols=288 Identities=14% Similarity=0.120 Sum_probs=246.0
Q ss_pred CCCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEE
Q 047260 435 EGTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCH 514 (784)
Q Consensus 435 ~~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~ 514 (784)
.++...+.++.+.+ .++.+|+.|+.+++|+...... ...+..+..+.+|...|++++
T Consensus 13 ~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~--------------------~~~~~~~~~~~~h~~~v~~~~ 69 (397)
T 1sq9_A 13 KAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDN--------------------ENPKDKSYSHFVHKSGLHHVD 69 (397)
T ss_dssp SCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTT--------------------CCGGGGEEEEECCTTCEEEEE
T ss_pred hhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCccc--------------------ccCCCcceEEecCCCcEEEEE
Confidence 44555566666655 5677899999999998754321 112345667789999999999
Q ss_pred EcCC----C---CEEEEEeCCCeEEEEECCCCce-----eeecCCC-----CCCeEEEEEc----cCCCE-EEEEeCCCe
Q 047260 515 FSSD----G---KLLASSGHDRKVVLWNMDTLQT-----ESTPEDH-----KSVVTDVRFR----PNSSQ-LATASVDKS 572 (784)
Q Consensus 515 fspd----g---~~Lasgs~Dg~I~IWd~~t~~~-----~~~l~~h-----~~~It~i~fs----pdg~~-Latgs~Dg~ 572 (784)
|+|+ + ++|++++.||.|++||+.+++. +..+..| ...|.+++|+ |++++ |++++.||.
T Consensus 70 ~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~ 149 (397)
T 1sq9_A 70 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGT 149 (397)
T ss_dssp EEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSC
T ss_pred EecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCc
Confidence 9999 9 9999999999999999998886 7888888 5999999999 99999 999999999
Q ss_pred EEEEcCCC------Ccceee-----ec-------cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee---
Q 047260 573 VRLWDAAN------PNFCSQ-----AY-------TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT--- 631 (784)
Q Consensus 573 I~IWdl~~------~~~~~~-----~~-------~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~--- 631 (784)
|++||+.+ ... .. .+ ..|...|.+++|+|++ ++++++.|+.|++||+++.+.+..+
T Consensus 150 i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 226 (397)
T 1sq9_A 150 TYIWKFHPFADESNSLT-LNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQ 226 (397)
T ss_dssp EEEEEEESSSSHHHHTT-TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEeCCccccccccce-eeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEecc
Confidence 99999987 442 22 34 4588999999999998 8889999999999999987766554
Q ss_pred ------cCCeeEEEEecCCCEEEEEECC---CcEEEEECCCCeEEEEEeC-------------CCCCEEEEEEcCCCCEE
Q 047260 632 ------KGGTAQVRFQPRIGQLLAAASD---KVVSIFDIETDRQTHSLQG-------------HAELVNYICWDTNGDYL 689 (784)
Q Consensus 632 ------~~~v~~v~fsp~~~~Ll~~s~D---g~I~IwDl~t~~~i~~l~~-------------h~~~V~sl~~spdg~~L 689 (784)
...+.+++|+|++.+|++++.| +.|++||+++++.+..+.. |...|.+++|+|++.+|
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 306 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE
Confidence 5568999999999999999999 9999999999999999998 99999999999999999
Q ss_pred EEEeCC-eEEEEeCCCCceEEEec------cC---------------CCceEEEEEecCC----------CEEEEEECCC
Q 047260 690 ASVSQN-LVKVWSMASGECIQELS------SN---------------GNQFHSCVFHPSY----------STLLVVGGIS 737 (784)
Q Consensus 690 asgsdd-~I~IwDl~t~~~i~~l~------~~---------------~~~I~sl~fspdg----------~~L~s~s~dg 737 (784)
++++.+ .|+|||+++++++..+. .| ...|.+++|+|++ .+|++++.||
T Consensus 307 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg 386 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR 386 (397)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT
T ss_pred EEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC
Confidence 999965 99999999999999998 77 8999999999998 7999999999
Q ss_pred eEEEEECCCCc
Q 047260 738 SLELWNMAENK 748 (784)
Q Consensus 738 ~I~Iwdl~~~~ 748 (784)
.|++||+.+++
T Consensus 387 ~i~iw~~~~g~ 397 (397)
T 1sq9_A 387 SIRWFREAGGK 397 (397)
T ss_dssp EEEEEEEEC--
T ss_pred cEEEEEcCCCC
Confidence 99999998763
No 76
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.2e-32 Score=309.65 Aligned_cols=270 Identities=18% Similarity=0.414 Sum_probs=240.4
Q ss_pred EEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcC
Q 047260 499 EVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDA 578 (784)
Q Consensus 499 ~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl 578 (784)
.+....+|...|+|+.| ++++|++|+.||.|+|||+.+++.+..+.+|...|++++| ++++|++|+.||+|++||+
T Consensus 125 ~~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 125 RIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp CEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred EEecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEEC
Confidence 34445568888999987 7899999999999999999999999999999999999999 7889999999999999999
Q ss_pred CCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeE------EeecCCeeEEEEecCCCEEEEEEC
Q 047260 579 ANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCT------HITKGGTAQVRFQPRIGQLLAAAS 652 (784)
Q Consensus 579 ~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~------~~~~~~v~~v~fsp~~~~Ll~~s~ 652 (784)
.+++ ....+.+|...|.+++|+++ ++++++.||.|++||+++.... ..+...+.++.| ++..+++++.
T Consensus 201 ~~~~-~~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~ 274 (435)
T 1p22_A 201 NTGE-MLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 274 (435)
T ss_dssp SSCC-EEEEECCCCSCEEEEECCTT---EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred CCCc-EEEEEcCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeC
Confidence 9876 67778899999999999743 8999999999999999875433 234467788888 6789999999
Q ss_pred CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEE
Q 047260 653 DKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLL 731 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~ 731 (784)
|+.|++||+++++.+..+.+|...|.++.|+ +.+|++++.+ .|++||+++++++.++..|...|.++.| ++.+|+
T Consensus 275 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~ 350 (435)
T 1p22_A 275 DRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIV 350 (435)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEE
T ss_pred CCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEE
Confidence 9999999999999999999999999999994 6788888855 9999999999999999999999999999 678999
Q ss_pred EEECCCeEEEEECCCCc---------eE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 732 VVGGISSLELWNMAENK---------SM-TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 732 s~s~dg~I~Iwdl~~~~---------~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+++.||.|++||+.++. .+ .+..|.+.|.+++| ++.+|++++.||.|+|||
T Consensus 351 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 351 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 411 (435)
T ss_dssp EEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred EEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEE
Confidence 99999999999987654 33 67899999999999 678999999999999997
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-33 Score=339.28 Aligned_cols=313 Identities=12% Similarity=0.114 Sum_probs=243.9
Q ss_pred CcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCC
Q 047260 439 SLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSD 518 (784)
Q Consensus 439 ~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspd 518 (784)
..+..+.|.+ .+++.+++.|++|++|+..... .+..+. |.+.|++++|+|+
T Consensus 59 ~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~~~--------------------------~~~~~~-~~~~V~~v~~sp~ 109 (902)
T 2oaj_A 59 SAIKEMRFVK--GIYLVVINAKDTVYVLSLYSQK--------------------------VLTTVF-VPGKITSIDTDAS 109 (902)
T ss_dssp CCEEEEEEET--TTEEEEEETTCEEEEEETTTCS--------------------------EEEEEE-CSSCEEEEECCTT
T ss_pred CCEEEEEEcC--CCEEEEEECcCeEEEEECCCCc--------------------------EEEEEc-CCCCEEEEEECCC
Confidence 3455666766 4466678899999999774321 223333 6688999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCcee-----------eecCCCCCCeEEEEEccC-CCEEEEEeCCCeEEEEcCCCCcceee
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTE-----------STPEDHKSVVTDVRFRPN-SSQLATASVDKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~-----------~~l~~h~~~It~i~fspd-g~~Latgs~Dg~I~IWdl~~~~~~~~ 586 (784)
+++|++|+.||.|++||+.+++.. ..+.+|.+.|++++|+|+ +..|++|+.||.| +||+++.+ +..
T Consensus 110 g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~-~~~ 187 (902)
T 2oaj_A 110 LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE-IKQ 187 (902)
T ss_dssp CSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE-EEE
T ss_pred CCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc-eEE
Confidence 999999999999999999987754 345789999999999995 5789999999999 99999866 444
Q ss_pred eccCC------------------CCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe--e---------------
Q 047260 587 AYTGH------------------SSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI--T--------------- 631 (784)
Q Consensus 587 ~~~~h------------------~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~--~--------------- 631 (784)
.+..| ...|.+++|+|++. +|++++.|+.|++||+++++++.. +
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~ 266 (902)
T 2oaj_A 188 SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRD 266 (902)
T ss_dssp EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCC
T ss_pred EEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCC
Confidence 44444 57899999999976 888999999999999865443221 0
Q ss_pred ----cCCeeEEEE-------------------------------------------------------------------
Q 047260 632 ----KGGTAQVRF------------------------------------------------------------------- 640 (784)
Q Consensus 632 ----~~~v~~v~f------------------------------------------------------------------- 640 (784)
...|.+++|
T Consensus 267 ~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~ 346 (902)
T 2oaj_A 267 SSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIV 346 (902)
T ss_dssp CSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEE
T ss_pred CccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceE
Confidence 011222222
Q ss_pred --------------------------------------------------------------------------------
Q 047260 641 -------------------------------------------------------------------------------- 640 (784)
Q Consensus 641 -------------------------------------------------------------------------------- 640 (784)
T Consensus 347 ~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~ 426 (902)
T 2oaj_A 347 NILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQN 426 (902)
T ss_dssp EEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBC
T ss_pred EEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccC
Confidence
Q ss_pred -----------------ecCCCEEEEEECCCcEEEEECCCCeEE----EE--Ee-----CCCCCEEEEEEcCCCCEEEEE
Q 047260 641 -----------------QPRIGQLLAAASDKVVSIFDIETDRQT----HS--LQ-----GHAELVNYICWDTNGDYLASV 692 (784)
Q Consensus 641 -----------------sp~~~~Ll~~s~Dg~I~IwDl~t~~~i----~~--l~-----~h~~~V~sl~~spdg~~Lasg 692 (784)
+|++..|++++.|++|++||+.++... .. +. +|...|.+|+|+|++++||++
T Consensus 427 ~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsg 506 (902)
T 2oaj_A 427 KDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVS 506 (902)
T ss_dssp CCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEE
T ss_pred CCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEE
Confidence 233445666666777777776655311 11 11 678899999999999999999
Q ss_pred eCC-eEEEEeCCCC---------------------------------------------ceEEEeccCCCceEEEEEecC
Q 047260 693 SQN-LVKVWSMASG---------------------------------------------ECIQELSSNGNQFHSCVFHPS 726 (784)
Q Consensus 693 sdd-~I~IwDl~t~---------------------------------------------~~i~~l~~~~~~I~sl~fspd 726 (784)
+.+ +|+|||+.++ +++..+..|...|++++|+|+
T Consensus 507 s~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpd 586 (902)
T 2oaj_A 507 IETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNI 586 (902)
T ss_dssp ETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBT
T ss_pred ecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCC
Confidence 966 9999999765 247788889999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCceEE------ec-ccCCceEEEEEe-----CCC---CEEEEEECCCcEEEeC
Q 047260 727 YSTLLVVGGISSLELWNMAENKSMT------IA-AHENIISALAQS-----PVT---GMVASASHDSSVKLWK 784 (784)
Q Consensus 727 g~~L~s~s~dg~I~Iwdl~~~~~~~------~~-~h~~~V~slafs-----pdg---~~LaSgs~DG~V~IWd 784 (784)
| +|++++.|++|+|||+.+...+. +. +|.+.|++|+|+ ||| .+|++|+.||+|++||
T Consensus 587 G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 587 G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK 658 (902)
T ss_dssp S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence 9 99999999999999998876642 22 789999999999 885 7999999999999996
No 78
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.3e-33 Score=308.02 Aligned_cols=275 Identities=13% Similarity=0.093 Sum_probs=221.4
Q ss_pred CCceEEEEEcCCCCEEEEEeCCC-------eEEEEECCCCce----------eeecCCCCCCeEEEEEccCCCEEEEEe-
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDR-------KVVLWNMDTLQT----------ESTPEDHKSVVTDVRFRPNSSQLATAS- 568 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg-------~I~IWd~~t~~~----------~~~l~~h~~~It~i~fspdg~~Latgs- 568 (784)
.-+|+|++|+||+++||+|+.|. +|+||++..... ...+..|...|.+++++ ++.+++|+
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 45799999999999999997543 599999875432 13466888899988875 55677654
Q ss_pred ----------CCCeEEEEcCCCCcceeee--------ccCCCCCeEEEEEcCCCCcEE-EEEeCCCeEEEEeCCCCeeEE
Q 047260 569 ----------VDKSVRLWDAANPNFCSQA--------YTGHSSPIMSLDFHPKKTDLF-CFCDNDNEIQYWSINPFLCTH 629 (784)
Q Consensus 569 ----------~Dg~I~IWdl~~~~~~~~~--------~~~h~~~V~sl~~sp~~~~ll-~sgs~dg~I~iwDl~~~~~~~ 629 (784)
.|+.|++|++......... ...+...+.+++|+||+..++ ++++.|+.|++||+++.+++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 4778999998765422211 123455689999999998765 355679999999999988776
Q ss_pred ee--cCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEeCC-----eEEEE
Q 047260 630 IT--KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVSQN-----LVKVW 700 (784)
Q Consensus 630 ~~--~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgsdd-----~I~Iw 700 (784)
.+ ...|.+++|+|++.++++++ ++.+.+|+..+++.+.. ...|...|.+++|+|++.++++++.+ .+++|
T Consensus 172 ~~~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 172 EIETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp EEECSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEE
T ss_pred EeCCCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeec
Confidence 54 46799999999999888877 45677777777765543 34588899999999999999988732 68889
Q ss_pred eCCCCce----EEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-E-ecccCCceEEEEEeCCCCEEEEE
Q 047260 701 SMASGEC----IQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-T-IAAHENIISALAQSPVTGMVASA 774 (784)
Q Consensus 701 Dl~t~~~----i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~-~~~h~~~V~slafspdg~~LaSg 774 (784)
|+..... ...+..|...|++++|+|++++|++++.|++|+|||+.+++++ . +.+|...|++|+|+||+++||||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEE
T ss_pred ccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEE
Confidence 9877643 4567788899999999999999999999999999999999887 3 36899999999999999999999
Q ss_pred ECCCcEEEeC
Q 047260 775 SHDSSVKLWK 784 (784)
Q Consensus 775 s~DG~V~IWd 784 (784)
|.|++|+|||
T Consensus 331 S~D~tvrvw~ 340 (365)
T 4h5i_A 331 SAANTIHIIK 340 (365)
T ss_dssp ETTSEEEEEE
T ss_pred eCCCeEEEEE
Confidence 9999999996
No 79
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=289.94 Aligned_cols=282 Identities=11% Similarity=0.147 Sum_probs=244.1
Q ss_pred CCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEc
Q 047260 437 TGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFS 516 (784)
Q Consensus 437 ~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fs 516 (784)
+...+.+..+.++.. ++.+|+.|+.+++|+.... ..+..+.+|.+.|++++|+
T Consensus 31 h~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~--------------------------~~~~~~~~h~~~v~~~~~~ 83 (369)
T 3zwl_B 31 HERPLTQVKYNKEGD-LLFSCSKDSSASVWYSLNG--------------------------ERLGTLDGHTGTIWSIDVD 83 (369)
T ss_dssp CSSCEEEEEECTTSC-EEEEEESSSCEEEEETTTC--------------------------CEEEEECCCSSCEEEEEEC
T ss_pred eeceEEEEEEcCCCC-EEEEEeCCCEEEEEeCCCc--------------------------hhhhhhhhcCCcEEEEEEc
Confidence 344466777777655 4557889999999976322 2456678899999999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEcCCCCcc--------
Q 047260 517 SDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVD-----KSVRLWDAANPNF-------- 583 (784)
Q Consensus 517 pdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~D-----g~I~IWdl~~~~~-------- 583 (784)
|++++|++++.||.|++||+.+++.+..+. |...|.+++|+|++++|++++.+ +.|++||+.....
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~ 162 (369)
T 3zwl_B 84 CFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVS 162 (369)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccc
Confidence 999999999999999999999999998887 88999999999999999999999 9999999976542
Q ss_pred --eeeeccCCCC--CeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-CeeEEee---cCCeeEEEEecCCCEEEEEECCCc
Q 047260 584 --CSQAYTGHSS--PIMSLDFHPKKTDLFCFCDNDNEIQYWSINP-FLCTHIT---KGGTAQVRFQPRIGQLLAAASDKV 655 (784)
Q Consensus 584 --~~~~~~~h~~--~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~-~~~~~~~---~~~v~~v~fsp~~~~Ll~~s~Dg~ 655 (784)
....+..|.. .+.+++|+|++. ++++++.||.|++||+++ ...+..+ ...+.+++|+|++.+|++++.|+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 241 (369)
T 3zwl_B 163 EEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN 241 (369)
T ss_dssp SSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred cceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce
Confidence 2233445555 899999999887 777889999999999997 5555443 468999999999999999999999
Q ss_pred EEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC---------------eEEEEeCCCCceEEEeccCCCceEE
Q 047260 656 VSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN---------------LVKVWSMASGECIQELSSNGNQFHS 720 (784)
Q Consensus 656 I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd---------------~I~IwDl~t~~~i~~l~~~~~~I~s 720 (784)
|++||+++++.+..+. +...+.+++|+|++.++++++.+ .|++||+.+++.+..+..|...|.+
T Consensus 242 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~ 320 (369)
T 3zwl_B 242 SFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNT 320 (369)
T ss_dssp EEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEE
Confidence 9999999999988888 78899999999999999988743 6999999999999999999999999
Q ss_pred EEEecCCCEEEEEECCCeEEEEECCCCc
Q 047260 721 CVFHPSYSTLLVVGGISSLELWNMAENK 748 (784)
Q Consensus 721 l~fspdg~~L~s~s~dg~I~Iwdl~~~~ 748 (784)
++|+|++++|++++.||.|++|++..+.
T Consensus 321 ~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 321 VAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred EEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 9999999999999999999999998754
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.5e-33 Score=298.81 Aligned_cols=287 Identities=12% Similarity=0.249 Sum_probs=237.3
Q ss_pred CCCcccccccccCCCceEecccc---CCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEE
Q 047260 437 TGSLASASNLLEDIDRFADVGSI---DENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCC 513 (784)
Q Consensus 437 ~~~~~ss~~~~~~~~~ll~~gS~---D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l 513 (784)
+...+.++.+.++...++++|+. |+.+++|+..... . ......+|...|+++
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~------------------------~-~~~~~~~~~~~v~~~ 71 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD------------------------L-KLLREIEKAKPIKCG 71 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS------------------------E-EEEEEEEESSCEEEE
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc------------------------c-cceeeecccCcEEEE
Confidence 44567778888888889988988 9999999874322 0 111223689999999
Q ss_pred EEcCC---CCEEEEEeCCCeEEEEECCCCc-eeeecCCCCCCeEEEEE------ccCCCEEEEEeCCCeEEEEcCCCCcc
Q 047260 514 HFSSD---GKLLASSGHDRKVVLWNMDTLQ-TESTPEDHKSVVTDVRF------RPNSSQLATASVDKSVRLWDAANPNF 583 (784)
Q Consensus 514 ~fspd---g~~Lasgs~Dg~I~IWd~~t~~-~~~~l~~h~~~It~i~f------spdg~~Latgs~Dg~I~IWdl~~~~~ 583 (784)
+|+|+ +++|++|+.||.|++||+.+++ .+..+.+|...|+++.| +|++++|++++.||.|++||++++..
T Consensus 72 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~ 151 (357)
T 3i2n_A 72 TFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD 151 (357)
T ss_dssp ECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS
T ss_pred EEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC
Confidence 99998 6999999999999999999888 88889999999999965 67899999999999999999998764
Q ss_pred eeeeccCCCC----CeEEEE----EcCCCCcEEEEEeCCCeEEEEeCCCCeeEE--eecCCeeEEEEec---CCCEEEEE
Q 047260 584 CSQAYTGHSS----PIMSLD----FHPKKTDLFCFCDNDNEIQYWSINPFLCTH--ITKGGTAQVRFQP---RIGQLLAA 650 (784)
Q Consensus 584 ~~~~~~~h~~----~V~sl~----~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~--~~~~~v~~v~fsp---~~~~Ll~~ 650 (784)
....+..|.. .|.+++ |+|++. ++++++.|+.|++||+++..... .+...+.+++|+| ++..++++
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 230 (357)
T 3i2n_A 152 PVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVAT 230 (357)
T ss_dssp CSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEE
T ss_pred cceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEE
Confidence 5555555444 899998 667766 78889999999999999877654 3457899999999 89999999
Q ss_pred ECCCcEEEEECCCCeEEEEEe-----CCCCCEEEEEEcCCCC-EEEEEeCC-eEEEEeCCCC------------------
Q 047260 651 ASDKVVSIFDIETDRQTHSLQ-----GHAELVNYICWDTNGD-YLASVSQN-LVKVWSMASG------------------ 705 (784)
Q Consensus 651 s~Dg~I~IwDl~t~~~i~~l~-----~h~~~V~sl~~spdg~-~Lasgsdd-~I~IwDl~t~------------------ 705 (784)
+.||.|++||+++++.+..+. +|...|.+++|+|++. +|++++.+ .|++||++.+
T Consensus 231 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~ 310 (357)
T 3i2n_A 231 SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGS 310 (357)
T ss_dssp ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCE
T ss_pred CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccc
Confidence 999999999998876544443 8999999999999998 78888855 9999999754
Q ss_pred -ceEEEeccCCCceEEEEEecCCCEEE-EEECCCeEEEEECCCCce
Q 047260 706 -ECIQELSSNGNQFHSCVFHPSYSTLL-VVGGISSLELWNMAENKS 749 (784)
Q Consensus 706 -~~i~~l~~~~~~I~sl~fspdg~~L~-s~s~dg~I~Iwdl~~~~~ 749 (784)
+++..+..|...|.+++|+|++++|+ +++.|+.|+|||+.+...
T Consensus 311 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 311 VSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 46778889999999999999999998 799999999999987653
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.2e-31 Score=299.76 Aligned_cols=270 Identities=23% Similarity=0.466 Sum_probs=239.8
Q ss_pred EEeEeecCCCce-EEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 499 EVGCIRSRNSKV-TCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 499 ~i~~l~~H~~~V-~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
....+.+|.+.| .| +++++++|++|+.||.|+|||+.+++.+..+.+|...|++++|+ +++|++|+.||+|++||
T Consensus 110 ~~~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd 185 (445)
T 2ovr_B 110 SPKVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWN 185 (445)
T ss_dssp CCEEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred eeEEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEE
Confidence 456688999876 55 44568999999999999999999999999999999999999997 66999999999999999
Q ss_pred CCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee---cCCeeEEEEecCCCEEEEEECCC
Q 047260 578 AANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT---KGGTAQVRFQPRIGQLLAAASDK 654 (784)
Q Consensus 578 l~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~---~~~v~~v~fsp~~~~Ll~~s~Dg 654 (784)
+.+++ ....+.+|...|.++.|+++ .+++++.||.|++||+++.+.+..+ ...+.++.+ ++..+++++.|+
T Consensus 186 ~~~~~-~~~~~~~h~~~v~~~~~~~~---~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 259 (445)
T 2ovr_B 186 AETGE-CIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF 259 (445)
T ss_dssp TTTTE-EEEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS
T ss_pred CCcCc-EEEEECCCCCcEEEEEecCC---EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC
Confidence 99876 67778899999999999643 7899999999999999987776554 466788888 778999999999
Q ss_pred cEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEE
Q 047260 655 VVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVV 733 (784)
Q Consensus 655 ~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~ 733 (784)
.|++||+++++.+..+.+|...|.+++| ++.++++++.+ .|++||+++++++..+..|...+.++.++ +.+++++
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 335 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSG 335 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEE
T ss_pred EEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEE
Confidence 9999999999999999999999999999 78889988855 99999999999999999999988888875 5599999
Q ss_pred ECCCeEEEEECCCCceE-Eecc---cCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 734 GGISSLELWNMAENKSM-TIAA---HENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 734 s~dg~I~Iwdl~~~~~~-~~~~---h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+.||.|++||+.+++.+ .+.. |...|.+++|+ +++|++|+.||.|+|||
T Consensus 336 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 336 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 388 (445)
T ss_dssp ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEE
Confidence 99999999999998877 4443 88999999996 67999999999999996
No 82
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.6e-32 Score=289.39 Aligned_cols=242 Identities=19% Similarity=0.347 Sum_probs=207.9
Q ss_pred eecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCC-cceeeeccCCCCCeEEEEEcCC-CCcEEEEEeCCCeEEEE
Q 047260 543 STPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANP-NFCSQAYTGHSSPIMSLDFHPK-KTDLFCFCDNDNEIQYW 620 (784)
Q Consensus 543 ~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~-~~~~~~~~~h~~~V~sl~~sp~-~~~ll~sgs~dg~I~iw 620 (784)
..+.+|...|++++|+|++++|++|+.|++|+|||+... ..+...+.+|...|.+++|+++ ...+|++|+.|+.|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 456789999999999999999999999999999999753 2356778899999999999864 24589999999999999
Q ss_pred eCCCCe--eE---EeecCCeeEEEEecC--CCEEEEEECCCcEEEEECCCCe--EEEEEeCCCCCEEEEEEcCC------
Q 047260 621 SINPFL--CT---HITKGGTAQVRFQPR--IGQLLAAASDKVVSIFDIETDR--QTHSLQGHAELVNYICWDTN------ 685 (784)
Q Consensus 621 Dl~~~~--~~---~~~~~~v~~v~fsp~--~~~Ll~~s~Dg~I~IwDl~t~~--~i~~l~~h~~~V~sl~~spd------ 685 (784)
|+++.. .+ ..+...+.+++|+|+ +..|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998653 22 234578999999997 7899999999999999998763 24567889999999999997
Q ss_pred -------CCEEEEEeCC-eEEEEeCCCCc----eEEEeccCCCceEEEEEecCC---CEEEEEECCCeEEEEECCCCc--
Q 047260 686 -------GDYLASVSQN-LVKVWSMASGE----CIQELSSNGNQFHSCVFHPSY---STLLVVGGISSLELWNMAENK-- 748 (784)
Q Consensus 686 -------g~~Lasgsdd-~I~IwDl~t~~----~i~~l~~~~~~I~sl~fspdg---~~L~s~s~dg~I~Iwdl~~~~-- 748 (784)
+++|++++.| .|+|||+++++ ++.++.+|...|.+++|+|++ .+|++++.|++|+|||+....
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 5789998866 99999998875 667888999999999999985 789999999999999998743
Q ss_pred -e-EEe--cccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 749 -S-MTI--AAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 749 -~-~~~--~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
. ..+ ..|...|.+++|+|++++|++++.||.|+||+
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 1 122 46888999999999999999999999999995
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-31 Score=282.96 Aligned_cols=282 Identities=15% Similarity=0.199 Sum_probs=236.9
Q ss_pred CCCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEE
Q 047260 435 EGTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCH 514 (784)
Q Consensus 435 ~~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~ 514 (784)
.++...+.++.+ ++... +.+|+.|+.+++|+.... .....+..|...|.+++
T Consensus 15 ~~h~~~v~~~~~-~~~~~-l~s~~~dg~v~vw~~~~~--------------------------~~~~~~~~~~~~v~~~~ 66 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSK-VASVSRDGTVRLWSKDDQ--------------------------WLGTVVYTGQGFLNSVC 66 (313)
T ss_dssp CCCSSCEEEEEE-EETTE-EEEEETTSEEEEEEESSS--------------------------EEEEEEEECSSCEEEEE
T ss_pred hCCCCCcEEEEe-cCCCE-EEEEEcCCcEEEEECCCC--------------------------EEEEEeecCCccEEEEE
Confidence 344455666666 54444 557899999999987321 24456678999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCC---ceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCC
Q 047260 515 FSSDGKLLASSGHDRKVVLWNMDTL---QTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGH 591 (784)
Q Consensus 515 fspdg~~Lasgs~Dg~I~IWd~~t~---~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h 591 (784)
|+|++++|++++.||.|++|++... +.+..+..|...|.+++| ++++|++++.|+.|++|| . ......+..|
T Consensus 67 ~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~-~~~~~~~~~~ 141 (313)
T 3odt_A 67 YDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--E-GSLVYNLQAH 141 (313)
T ss_dssp EETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--T-TEEEEEEECC
T ss_pred ECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--C-CcEEEecccC
Confidence 9999999999999999999998754 567778899999999999 577999999999999999 2 3366777889
Q ss_pred CCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe--ecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE
Q 047260 592 SSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI--TKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS 669 (784)
Q Consensus 592 ~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~--~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~ 669 (784)
...|.++.|.|....++++++.|+.|++||......... +...+.+++|+|++. +++++.|+.|++||+++++.+..
T Consensus 142 ~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~ 220 (313)
T 3odt_A 142 NASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRT 220 (313)
T ss_dssp SSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEE
T ss_pred CCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhh
Confidence 999999999995555888999999999999654333322 457889999999987 99999999999999999999999
Q ss_pred EeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCce
Q 047260 670 LQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKS 749 (784)
Q Consensus 670 l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~ 749 (784)
+..|...|.+++|+|++.+++++.++.|++||+++++++..+..|...|.+++|+|++. +++++.||.|++||+.+++.
T Consensus 221 ~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 221 YEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred hhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 99999999999999999644444466999999999999999999999999999999998 77899999999999998876
Q ss_pred EE
Q 047260 750 MT 751 (784)
Q Consensus 750 ~~ 751 (784)
..
T Consensus 300 ~~ 301 (313)
T 3odt_A 300 AS 301 (313)
T ss_dssp CC
T ss_pred ee
Confidence 53
No 84
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.9e-32 Score=296.68 Aligned_cols=283 Identities=17% Similarity=0.257 Sum_probs=235.5
Q ss_pred CCCCcccccccccC---CCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEe--ecCCCce
Q 047260 436 GTGSLASASNLLED---IDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCI--RSRNSKV 510 (784)
Q Consensus 436 ~~~~~~ss~~~~~~---~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l--~~H~~~V 510 (784)
++...+.++.+.++ ...++.+++.++.+++|+...... ...+..+ ..|...|
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~-----------------------~~~~~~~~~~~~~~~v 72 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGE-----------------------IRLLQSYVDADADENF 72 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGC-----------------------EEEEEEEECSCTTCCE
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcE-----------------------EEeeeeccccCCCCcE
Confidence 44455667777653 455555666778999998754321 1122222 2378899
Q ss_pred EEEEEcCC----CCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEcCCCCccee
Q 047260 511 TCCHFSSD----GKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRP-NSSQLATASVDKSVRLWDAANPNFCS 585 (784)
Q Consensus 511 ~~l~fspd----g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fsp-dg~~Latgs~Dg~I~IWdl~~~~~~~ 585 (784)
++++|+|+ +.+|++|+.||.|+|||+.+++.+..+.+|...|++++|+| ++.+|++++.||.|++||+++++ ..
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~ 151 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT-LV 151 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE-EE
T ss_pred EEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe-EE
Confidence 99999998 67999999999999999999999999999999999999999 99999999999999999999876 44
Q ss_pred eec---cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE-------------------------------ee
Q 047260 586 QAY---TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTH-------------------------------IT 631 (784)
Q Consensus 586 ~~~---~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~-------------------------------~~ 631 (784)
..+ .+|...|.+++|+|++. ++++++.|+.|++||+++.+... .+
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T 3k26_A 152 AIFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH 230 (366)
T ss_dssp EEECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC
T ss_pred EEecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC
Confidence 444 68999999999999876 77888899999999998643321 15
Q ss_pred cCCeeEEEEecCCCEEEEEECCCcEEEEECCCCe--------------EEEEEeCCCCCEEEEEEcCC--CCEEEEEeCC
Q 047260 632 KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDR--------------QTHSLQGHAELVNYICWDTN--GDYLASVSQN 695 (784)
Q Consensus 632 ~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~--------------~i~~l~~h~~~V~sl~~spd--g~~Lasgsdd 695 (784)
...+.+++|+ +.++++++.|+.|++||+++.. .+..+..|...|.+++|+|+ +.+|++++.+
T Consensus 231 ~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d 308 (366)
T 3k26_A 231 RNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 308 (366)
T ss_dssp SSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT
T ss_pred cceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC
Confidence 6788999998 6799999999999999998764 37788889999999999999 9999999865
Q ss_pred -eEEEEeCCCCc----eEEEeccC--CCceEEEEEecCCCEEEEEECCCeEEEEECC
Q 047260 696 -LVKVWSMASGE----CIQELSSN--GNQFHSCVFHPSYSTLLVVGGISSLELWNMA 745 (784)
Q Consensus 696 -~I~IwDl~t~~----~i~~l~~~--~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~ 745 (784)
.|++||+.+++ .+..+..| ...|.+++|+|++++|++++.||.|++||+.
T Consensus 309 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 309 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999875 44577777 7899999999999999999999999999985
No 85
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.8e-33 Score=298.28 Aligned_cols=244 Identities=20% Similarity=0.312 Sum_probs=203.5
Q ss_pred EeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--eeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEc
Q 047260 502 CIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ--TESTPEDHKSVVTDVRFRP--NSSQLATASVDKSVRLWD 577 (784)
Q Consensus 502 ~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~--~~~~l~~h~~~It~i~fsp--dg~~Latgs~Dg~I~IWd 577 (784)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++. .+..+.+|...|++++|++ ++++|++|+.|++|+|||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 356899999999999999999999999999999998764 4677889999999999986 489999999999999999
Q ss_pred CCCCc-ceeeeccCCCCCeEEEEEcCCC-CcEEEEEeCCCeEEEEeCCCCeeE---E---eecCCeeEEEEecC------
Q 047260 578 AANPN-FCSQAYTGHSSPIMSLDFHPKK-TDLFCFCDNDNEIQYWSINPFLCT---H---ITKGGTAQVRFQPR------ 643 (784)
Q Consensus 578 l~~~~-~~~~~~~~h~~~V~sl~~sp~~-~~ll~sgs~dg~I~iwDl~~~~~~---~---~~~~~v~~v~fsp~------ 643 (784)
++++. .....+.+|...|.+++|+|+. ..+|++++.|+.|++||++..... . .+...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98764 2455677899999999999983 458899999999999999865221 1 23456788999987
Q ss_pred -----------CCEEEEEECCCcEEEEECCCC---eEEEEEeCCCCCEEEEEEcCCC----CEEEEEeCC-eEEEEeCCC
Q 047260 644 -----------IGQLLAAASDKVVSIFDIETD---RQTHSLQGHAELVNYICWDTNG----DYLASVSQN-LVKVWSMAS 704 (784)
Q Consensus 644 -----------~~~Ll~~s~Dg~I~IwDl~t~---~~i~~l~~h~~~V~sl~~spdg----~~Lasgsdd-~I~IwDl~t 704 (784)
+.+|++++.|+.|++||++.. +.+..+.+|...|.+++|+|++ .+|++++.| +|+|||+.+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 368999999999999999765 4677788999999999999986 789999866 999999976
Q ss_pred C---c-eEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECC
Q 047260 705 G---E-CIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMA 745 (784)
Q Consensus 705 ~---~-~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~ 745 (784)
. . ....+..|...|.+++|+|++.+|++++.|+.|+||+..
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 3 1 223455678899999999999999999999999999975
No 86
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-31 Score=294.10 Aligned_cols=269 Identities=17% Similarity=0.294 Sum_probs=229.3
Q ss_pred CceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEee-cCCCceEEEEEcCCCCEEEEEeCCC
Q 047260 451 DRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIR-SRNSKVTCCHFSSDGKLLASSGHDR 529 (784)
Q Consensus 451 ~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~-~H~~~V~~l~fspdg~~Lasgs~Dg 529 (784)
..++ +++.|+.|++|+...+. ....+. .|...|++++|+|++++|++|+.||
T Consensus 104 ~~l~-~~~~d~~v~lw~~~~~~--------------------------~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg 156 (401)
T 4aez_A 104 LNVV-AVALERNVYVWNADSGS--------------------------VSALAETDESTYVASVKWSHDGSFLSVGLGNG 156 (401)
T ss_dssp TSEE-EEEETTEEEEEETTTCC--------------------------EEEEEECCTTCCEEEEEECTTSSEEEEEETTS
T ss_pred CCEE-EEECCCeEEEeeCCCCc--------------------------EeEeeecCCCCCEEEEEECCCCCEEEEECCCC
Confidence 4455 57799999999774322 111222 3889999999999999999999999
Q ss_pred eEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEE
Q 047260 530 KVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFC 609 (784)
Q Consensus 530 ~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~ 609 (784)
.|+|||+.+++.+..+..|...|.+++| ++++|++++.||.|++||++........+.+|...|.+++|+|++. +|+
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 233 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL-QLA 233 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEE
T ss_pred eEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC-EEE
Confidence 9999999999999999999999999999 4679999999999999999966667788889999999999999876 788
Q ss_pred EEeCCCeEEEEeCCCCeeEEee---cCCeeEEEEecCCCEEEEEE---CCCcEEEEECCCCeEEEEEeCCCCCEEEEEEc
Q 047260 610 FCDNDNEIQYWSINPFLCTHIT---KGGTAQVRFQPRIGQLLAAA---SDKVVSIFDIETDRQTHSLQGHAELVNYICWD 683 (784)
Q Consensus 610 sgs~dg~I~iwDl~~~~~~~~~---~~~v~~v~fsp~~~~Ll~~s---~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~s 683 (784)
+++.|+.|++||+++......+ ...+.+++|+|++..+++.+ .|+.|++||+++++.+..+. +...|.+++|+
T Consensus 234 s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s 312 (401)
T 4aez_A 234 SGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWS 312 (401)
T ss_dssp EEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEC
T ss_pred EEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEEC
Confidence 8999999999999987766544 46789999999887666654 59999999999999988886 67789999999
Q ss_pred CCCCEEEEEe---CCeEEEEeCCCCceEE--EeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 684 TNGDYLASVS---QNLVKVWSMASGECIQ--ELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 684 pdg~~Lasgs---dd~I~IwDl~t~~~i~--~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
|++.+|++++ ++.|+|||+.++.... .+..|...|.+++|+|++.+|++++.||.|++||+.+++.+
T Consensus 313 ~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp SSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred CCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 9999999854 5599999999975544 46789999999999999999999999999999999998766
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.8e-31 Score=297.35 Aligned_cols=271 Identities=18% Similarity=0.293 Sum_probs=233.3
Q ss_pred CceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCe
Q 047260 451 DRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRK 530 (784)
Q Consensus 451 ~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~ 530 (784)
..+|++| .|++|++|+...+. ...+..+.+|...|+||+|+|+|++||+|+.||.
T Consensus 116 ~n~lAvg-ld~tV~lWd~~tg~------------------------~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~ 170 (420)
T 4gga_A 116 GNVLAVA-LDNSVYLWSASSGD------------------------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 170 (420)
T ss_dssp TSEEEEE-ETTEEEEEETTTCC------------------------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred CCEEEEE-eCCEEEEEECCCCC------------------------EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCe
Confidence 3467766 69999999774332 1223345678899999999999999999999999
Q ss_pred EEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEE
Q 047260 531 VVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCF 610 (784)
Q Consensus 531 I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~s 610 (784)
|+|||+.+++.+..+.+|...|.+++|+ +.+|++|+.|+.+++||..........+.+|...+..+.|+|++. ++++
T Consensus 171 v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~-~l~s 247 (420)
T 4gga_A 171 VQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLAS 247 (420)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEE
T ss_pred EEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC-eeee
Confidence 9999999999999999999999999885 679999999999999999987777888899999999999999987 7888
Q ss_pred EeCCCeEEEEeCCCCe-------eEEeecCCeeEEEEecCCCEEE-EE--ECCCcEEEEECCCCeEEEEEeCCCCCEEEE
Q 047260 611 CDNDNEIQYWSINPFL-------CTHITKGGTAQVRFQPRIGQLL-AA--ASDKVVSIFDIETDRQTHSLQGHAELVNYI 680 (784)
Q Consensus 611 gs~dg~I~iwDl~~~~-------~~~~~~~~v~~v~fsp~~~~Ll-~~--s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl 680 (784)
++.|+.|++||..... ....+...+.+++|+|.+..++ ++ +.|+.|++||+++++++..+.. ...+.++
T Consensus 248 ~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~-~~~v~~~ 326 (420)
T 4gga_A 248 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-HSQVCSI 326 (420)
T ss_dssp EETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-SSCEEEE
T ss_pred eeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-ccceeee
Confidence 9999999999997543 2334557899999999876554 33 3589999999999999988874 4578899
Q ss_pred EEcCCCCEEEEEe---CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 681 CWDTNGDYLASVS---QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 681 ~~spdg~~Lasgs---dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
.|++++..+++++ ++.|+|||+.+++++.++.+|...|.+++|+|++.+|++++.|++|+|||+.+....
T Consensus 327 ~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 327 LWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp EEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC
T ss_pred eecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCcc
Confidence 9999999988775 459999999999999999999999999999999999999999999999999876544
No 88
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-31 Score=294.96 Aligned_cols=282 Identities=11% Similarity=0.075 Sum_probs=228.1
Q ss_pred CCCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEE
Q 047260 435 EGTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCH 514 (784)
Q Consensus 435 ~~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~ 514 (784)
.++...+.+..+.++...++.+|+.|+.+++|+..... ......+.+|.+.|++++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------------------------~~~~~~~~~h~~~v~~~~ 125 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN------------------------KTSFIQGMGPGDAITGMK 125 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT------------------------CEEEECCCSTTCBEEEEE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc------------------------cceeeecCCcCCceeEEE
Confidence 44455567777877775777789999999999774322 112222347999999999
Q ss_pred EcC-CCCEEEEEeCCCeEEEEECCCCceeeecCC---CCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccC
Q 047260 515 FSS-DGKLLASSGHDRKVVLWNMDTLQTESTPED---HKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTG 590 (784)
Q Consensus 515 fsp-dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~---h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~ 590 (784)
|+| ++++|++++.|+.|++||+.+ ..+..+.. |...|.+++|+|++++|++++.|+.|++||++ ++ ....+.+
T Consensus 126 ~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~-~~~~~~~ 202 (383)
T 3ei3_B 126 FNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH-EIFKEKL 202 (383)
T ss_dssp EETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC-EEEEEEC
T ss_pred eCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC-EEEEecc
Confidence 999 789999999999999999996 44455543 44889999999999999999999999999995 33 6677889
Q ss_pred CCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC----CeeEE--eecCCeeEEEEec-CCCEEEEEECCCcEEEEECCC
Q 047260 591 HSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP----FLCTH--ITKGGTAQVRFQP-RIGQLLAAASDKVVSIFDIET 663 (784)
Q Consensus 591 h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~----~~~~~--~~~~~v~~v~fsp-~~~~Ll~~s~Dg~I~IwDl~t 663 (784)
|...|.+++|+|++..++++++.|+.|++||+++ ..++. .+...+.+++|+| ++.+|++++.|+.|++||+++
T Consensus 203 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 203 HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 9999999999999988999999999999999986 44433 4568899999999 999999999999999999998
Q ss_pred CeEEEEEeCCC-----------------CCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCceEEEecc--CCCceEEEEE
Q 047260 664 DRQTHSLQGHA-----------------ELVNYICWDTNGDYLASVS-QNLVKVWSMASGECIQELSS--NGNQFHSCVF 723 (784)
Q Consensus 664 ~~~i~~l~~h~-----------------~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~~i~~l~~--~~~~I~sl~f 723 (784)
++.+..+.+|. ..+..++|+|++++ +++ ++.|+|||+.+++++..+.. +...+.+++|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~ 360 (383)
T 3ei3_B 283 WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKF 360 (383)
T ss_dssp TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEE
T ss_pred CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEE
Confidence 87766665442 23344555666655 333 55999999999999999987 4566778899
Q ss_pred ecCCCEEEEEECCCeEEEEECCC
Q 047260 724 HPSYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 724 spdg~~L~s~s~dg~I~Iwdl~~ 746 (784)
+|++.+|++++ |+.|+|||+++
T Consensus 361 s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 361 SPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CTTSSEEEEEE-TTEEEEEECC-
T ss_pred ecCccEEEEec-CCcEEEEecCC
Confidence 99999999997 89999999875
No 89
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.3e-31 Score=289.66 Aligned_cols=282 Identities=16% Similarity=0.205 Sum_probs=236.4
Q ss_pred ccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCC
Q 047260 441 ASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGK 520 (784)
Q Consensus 441 ~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~ 520 (784)
+.+..+.++.. ++.+++.|+.+++|+.... .+..+..+.+|...|++++|+|+++
T Consensus 11 i~~~~~s~~~~-~l~~~~~d~~v~i~~~~~~------------------------~~~~~~~~~~h~~~v~~~~~~~~~~ 65 (372)
T 1k8k_C 11 ISCHAWNKDRT-QIAICPNNHEVHIYEKSGN------------------------KWVQVHELKEHNGQVTGVDWAPDSN 65 (372)
T ss_dssp CCEEEECTTSS-EEEEECSSSEEEEEEEETT------------------------EEEEEEEEECCSSCEEEEEEETTTT
T ss_pred eEEEEECCCCC-EEEEEeCCCEEEEEeCCCC------------------------cEEeeeeecCCCCcccEEEEeCCCC
Confidence 45555655554 5557888999999977332 1346777889999999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCceee--ecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc---eeeeccCCCCCe
Q 047260 521 LLASSGHDRKVVLWNMDTLQTES--TPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF---CSQAYTGHSSPI 595 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~~~~--~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~---~~~~~~~h~~~V 595 (784)
+|++++.||.|++||+.+++... .+..|...|++++|+|++++|++++.|+.|++||++.... ......+|...|
T Consensus 66 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i 145 (372)
T 1k8k_C 66 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTV 145 (372)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCE
T ss_pred EEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCe
Confidence 99999999999999998876443 3467999999999999999999999999999999987653 334446789999
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEeCC------------------CCeeEEee---cCCeeEEEEecCCCEEEEEECCC
Q 047260 596 MSLDFHPKKTDLFCFCDNDNEIQYWSIN------------------PFLCTHIT---KGGTAQVRFQPRIGQLLAAASDK 654 (784)
Q Consensus 596 ~sl~~sp~~~~ll~sgs~dg~I~iwDl~------------------~~~~~~~~---~~~v~~v~fsp~~~~Ll~~s~Dg 654 (784)
.+++|+|++. ++++++.|+.|++||++ ....+..+ ...+.+++|+|++.+|++++.|+
T Consensus 146 ~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 224 (372)
T 1k8k_C 146 LSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS 224 (372)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT
T ss_pred eEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC
Confidence 9999999876 78889999999999963 44555544 46799999999999999999999
Q ss_pred cEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCC--Cce-------------------------
Q 047260 655 VVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMAS--GEC------------------------- 707 (784)
Q Consensus 655 ~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t--~~~------------------------- 707 (784)
.|++||+++++.+..+..|...|.+++|+|++.+|+++.++.|++||+.+ ++.
T Consensus 225 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (372)
T 1k8k_C 225 TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 304 (372)
T ss_dssp EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHH
T ss_pred EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhh
Confidence 99999999999999999999999999999999999999777999999987 421
Q ss_pred -------E------EEe-ccCCCceEEEEEe-cCC---CEEEEEECCCeEEEEECCCCc
Q 047260 708 -------I------QEL-SSNGNQFHSCVFH-PSY---STLLVVGGISSLELWNMAENK 748 (784)
Q Consensus 708 -------i------~~l-~~~~~~I~sl~fs-pdg---~~L~s~s~dg~I~Iwdl~~~~ 748 (784)
. ..+ .+|...|.+++|+ +++ .+|++++.||.|++||+.+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 305 LDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp CCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 0 223 3788999999976 666 899999999999999987644
No 90
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.6e-31 Score=289.55 Aligned_cols=327 Identities=16% Similarity=0.263 Sum_probs=235.5
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEe-----EeecCCCce
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVG-----CIRSRNSKV 510 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~-----~l~~H~~~V 510 (784)
++...+.+..+.+....++.+|+.|+.+++|+.........+ ...... ...+|...|
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYY------------------TCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCE------------------EECEEEEECTTCTTCCSSCE
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceE------------------eccccccccccccccCCCcE
Confidence 345566777777734556667889999999988554322111 111111 124599999
Q ss_pred EEEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccC---CCEEEEEeCCCeEEEEcCCCCcceee
Q 047260 511 TCCHFSS-DGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPN---SSQLATASVDKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 511 ~~l~fsp-dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspd---g~~Latgs~Dg~I~IWdl~~~~~~~~ 586 (784)
++++|+| ++.+|++++.||.|++||+.+++....+. +...+.++.|++. +.+|++++.|+.|++||++++. ...
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~~ 180 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS-CSH 180 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC-CCE
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc-eee
Confidence 9999999 77899999999999999999998888875 7889999999984 4599999999999999999876 567
Q ss_pred eccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe-eE------------------EeecCCeeEEEEecCCCEE
Q 047260 587 AYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL-CT------------------HITKGGTAQVRFQPRIGQL 647 (784)
Q Consensus 587 ~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~-~~------------------~~~~~~v~~v~fsp~~~~L 647 (784)
.+.+|...|.+++|+|++..++++++.||.|++||++... +. ..+...+.+++|+|++.+|
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 260 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHL 260 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEE
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEE
Confidence 7788999999999999999889999999999999997543 11 2345678999999999999
Q ss_pred EEEECCCcEEEEECCCCeEEEEEeCC------CCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEE
Q 047260 648 LAAASDKVVSIFDIETDRQTHSLQGH------AELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSC 721 (784)
Q Consensus 648 l~~s~Dg~I~IwDl~t~~~i~~l~~h------~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl 721 (784)
++++.|+.|++||+++++....+..+ ......+.......+++++.++.|++||+.+++++..+.+|...|.++
T Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~ 340 (408)
T 4a11_B 261 LTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCC 340 (408)
T ss_dssp EEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEE
Confidence 99999999999999988765544322 112223333445667777778899999999999999999999999999
Q ss_pred EEecCCCEEEEEECCCeEEEEECCCCceEEecccCCceEEEEEeC-CCCEEEEEECCCcEEEeC
Q 047260 722 VFHPSYSTLLVVGGISSLELWNMAENKSMTIAAHENIISALAQSP-VTGMVASASHDSSVKLWK 784 (784)
Q Consensus 722 ~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafsp-dg~~LaSgs~DG~V~IWd 784 (784)
+|+|++.+|++++.||.|++||+.+.+.+......... ..+.+ ....+.+++.|+.|++|+
T Consensus 341 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 341 VFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK--SQLNPAFEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp EEETTTTEEEEEETTSCEEEEEECC---------------------------------------
T ss_pred EEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec--cccccccceeecccCccCceeecC
Confidence 99999999999999999999999998876432222222 22233 334566777899999995
No 91
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=291.56 Aligned_cols=249 Identities=19% Similarity=0.288 Sum_probs=206.2
Q ss_pred EEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECC--CCceeeecCCCCCCeEEEEEccC--CCEEEEEeCCCeEE
Q 047260 499 EVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMD--TLQTESTPEDHKSVVTDVRFRPN--SSQLATASVDKSVR 574 (784)
Q Consensus 499 ~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~--t~~~~~~l~~h~~~It~i~fspd--g~~Latgs~Dg~I~ 574 (784)
.+..+.+|.+.|++++|+|++++||+|+.||.|+|||+. +.+.+..+.+|...|++++|+++ +++|++++.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 345678999999999999999999999999999999998 66777888999999999999976 99999999999999
Q ss_pred EEcCCCCcc-eeeeccCCCCCeEEEEEcCCC-CcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEEC
Q 047260 575 LWDAANPNF-CSQAYTGHSSPIMSLDFHPKK-TDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAAS 652 (784)
Q Consensus 575 IWdl~~~~~-~~~~~~~h~~~V~sl~~sp~~-~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~ 652 (784)
|||+.++.. ....+..|...|.+++|+|+. ..++++++.|+.|++||++....
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------------------- 137 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------------- 137 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-------------------------
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-------------------------
Confidence 999988652 455566788888888888872 22555666666666666553210
Q ss_pred CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcC-------------CCCEEEEEeCC-eEEEEeCCCCc----eEEEeccC
Q 047260 653 DKVVSIFDIETDRQTHSLQGHAELVNYICWDT-------------NGDYLASVSQN-LVKVWSMASGE----CIQELSSN 714 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~sp-------------dg~~Lasgsdd-~I~IwDl~t~~----~i~~l~~~ 714 (784)
.....+..|...|.+++|+| ++.+|++++.+ .|++||++++. ++..+..|
T Consensus 138 ------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 138 ------------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp ------------CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred ------------eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 12234557889999999999 69999999865 99999998764 55677889
Q ss_pred CCceEEEEEecC---CCEEEEEECCCeEEEEECCCCc---e-E--EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 715 GNQFHSCVFHPS---YSTLLVVGGISSLELWNMAENK---S-M--TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 715 ~~~I~sl~fspd---g~~L~s~s~dg~I~Iwdl~~~~---~-~--~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
...|.+++|+|+ +.+|++++.||.|++||+.++. . . ....|...|.+++|+|++++|++++.||.|+|||
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 999999999999 8999999999999999999874 1 2 2334889999999999999999999999999996
No 92
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1e-31 Score=298.37 Aligned_cols=275 Identities=14% Similarity=0.229 Sum_probs=232.5
Q ss_pred CceEEEEEcCCCCEE-EEEeCCCeEEEEECCCC----ceeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEcCCCC
Q 047260 508 SKVTCCHFSSDGKLL-ASSGHDRKVVLWNMDTL----QTESTPEDHKSVVTDVRFRP-NSSQLATASVDKSVRLWDAANP 581 (784)
Q Consensus 508 ~~V~~l~fspdg~~L-asgs~Dg~I~IWd~~t~----~~~~~l~~h~~~It~i~fsp-dg~~Latgs~Dg~I~IWdl~~~ 581 (784)
....+++++|+...+ ++++.||.|+||++... ..+..+.+|...|++++|+| ++++|++|+.||+|+|||+.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 345568899876544 45788999999999654 34456778999999999999 9999999999999999999886
Q ss_pred c------ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee-----cCCeeEEEEecCCCEEEEE
Q 047260 582 N------FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT-----KGGTAQVRFQPRIGQLLAA 650 (784)
Q Consensus 582 ~------~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~-----~~~v~~v~fsp~~~~Ll~~ 650 (784)
. .....+.+|...|.+++|+|++..++++++.|+.|++||+++.+.+..+ ...+.+++|+|++..|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 3 3566778999999999999998779999999999999999998877665 4678999999999999999
Q ss_pred ECCCcEEEEECCCCeEEEEE-eCCCCC-EEEEEEcCCCCEEEEE---e-CCeEEEEeCCCCce-EEEec-cCCCceEEEE
Q 047260 651 ASDKVVSIFDIETDRQTHSL-QGHAEL-VNYICWDTNGDYLASV---S-QNLVKVWSMASGEC-IQELS-SNGNQFHSCV 722 (784)
Q Consensus 651 s~Dg~I~IwDl~t~~~i~~l-~~h~~~-V~sl~~spdg~~Lasg---s-dd~I~IwDl~t~~~-i~~l~-~~~~~I~sl~ 722 (784)
+.|+.|++||+++++.+..+ ..|... +.+++|+|++.+|+++ + ++.|++||+++++. +.... .+...+.+++
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 99999999999999999988 678775 8999999999999998 4 44999999998754 33333 4667899999
Q ss_pred EecCCCEEEEEE-CCCeEEEEECCCCce--EEec--ccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 723 FHPSYSTLLVVG-GISSLELWNMAENKS--MTIA--AHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 723 fspdg~~L~s~s-~dg~I~Iwdl~~~~~--~~~~--~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
|+|++.+|++++ .|+.|++||+.+++. ..+. .|...|.+++|+|++.++++ .|+.+++|+
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYK 339 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEE
Confidence 999999997655 699999999998873 2333 36699999999999988775 567899995
No 93
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.3e-32 Score=305.54 Aligned_cols=284 Identities=12% Similarity=0.091 Sum_probs=229.0
Q ss_pred CcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcC-
Q 047260 439 SLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSS- 517 (784)
Q Consensus 439 ~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fsp- 517 (784)
..+.++.+.+....++++|+.|++|++|+..... ...+..+.+|.+.|++|+|+|
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~------------------------~~~~~~~~gH~~~V~~l~f~p~ 175 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD------------------------KPTFIKGIGAGGSITGLKFNPL 175 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS------------------------CCEEECCCSSSCCCCEEEECSS
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC------------------------ceeEEEccCCCCCEEEEEEeCC
Confidence 3466777888777888899999999999764322 112334568999999999998
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecC--CCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCe
Q 047260 518 DGKLLASSGHDRKVVLWNMDTLQTESTPE--DHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPI 595 (784)
Q Consensus 518 dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~--~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V 595 (784)
++.+|++|+.||+|+|||+++........ .+...+.+++|+|++.+|++|+.||.|++||++.. ....+.+|...|
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~~~~~~~h~~~v 253 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--ELWNLRMHKKKV 253 (435)
T ss_dssp CTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--BCCCSBCCSSCE
T ss_pred CCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--eeEEEecccceE
Confidence 78999999999999999998765443333 34456889999999999999999999999999753 456778999999
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeE------EeecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE
Q 047260 596 MSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCT------HITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS 669 (784)
Q Consensus 596 ~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~------~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~ 669 (784)
.+++|+|++..++++++.|+.|++||++..... ..+...|.+++|+|++.+|++++.|+.|+|||++++.....
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE
T ss_pred EeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE
Confidence 999999999999999999999999999864432 23457899999999999999999999999999999988877
Q ss_pred EeCCCC------CEEEEEEcCCCCEEEEEe------------CC-eEEEEeCCCCceEEEec-cCCCceEEE-EEecCCC
Q 047260 670 LQGHAE------LVNYICWDTNGDYLASVS------------QN-LVKVWSMASGECIQELS-SNGNQFHSC-VFHPSYS 728 (784)
Q Consensus 670 l~~h~~------~V~sl~~spdg~~Lasgs------------dd-~I~IwDl~t~~~i~~l~-~~~~~I~sl-~fspdg~ 728 (784)
+..|.. .+..+.|+|++.+++++. ++ .|++||..+++++..+. .|...|.++ +|+|++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~ 413 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGD 413 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSS
T ss_pred EecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCC
Confidence 766543 234567888877777664 22 79999999999988875 567778887 6999999
Q ss_pred EEEEEECCCeEEEEECCCCce
Q 047260 729 TLLVVGGISSLELWNMAENKS 749 (784)
Q Consensus 729 ~L~s~s~dg~I~Iwdl~~~~~ 749 (784)
+|++++ |+.|+|||+.+++.
T Consensus 414 ~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 414 TLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CEEEEC-SSEEEECCCC----
T ss_pred EEEEEc-CCcEEEEECCcCee
Confidence 888765 78999999998764
No 94
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8e-32 Score=295.22 Aligned_cols=278 Identities=15% Similarity=0.150 Sum_probs=219.0
Q ss_pred ccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCC
Q 047260 441 ASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGK 520 (784)
Q Consensus 441 ~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~ 520 (784)
+.+..+.++.. ++.+|+.|+.+++|+..... +..+..+.+|.+.|++++|+|+++
T Consensus 14 v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~~~------------------------~~~~~~~~~h~~~v~~~~~s~~~~ 68 (377)
T 3dwl_C 14 SYEHAFNSQRT-EFVTTTATNQVELYEQDGNG------------------------WKHARTFSDHDKIVTCVDWAPKSN 68 (377)
T ss_dssp CSCCEECSSSS-EEECCCSSSCBCEEEEETTE------------------------EEECCCBCCCSSCEEEEEECTTTC
T ss_pred EEEEEECCCCC-EEEEecCCCEEEEEEccCCc------------------------eEEEEEEecCCceEEEEEEeCCCC
Confidence 45566666555 55578899999999874321 234556778999999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCc---eeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc--eeeeccC-CCCC
Q 047260 521 LLASSGHDRKVVLWNMDTLQ---TESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF--CSQAYTG-HSSP 594 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~---~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~--~~~~~~~-h~~~ 594 (784)
+|++++.|+.|+|||+.+++ ....+..|...|++++|+|++++|++++.|+.|++||+++... +...+.+ |...
T Consensus 69 ~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~ 148 (377)
T 3dwl_C 69 RIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRST 148 (377)
T ss_dssp CEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSC
T ss_pred EEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCC
Confidence 99999999999999999876 6777889999999999999999999999999999999998653 3455666 9999
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEeCCC------------------CeeEE--eecCCeeEEEEecCCCEEEEEECCC
Q 047260 595 IMSLDFHPKKTDLFCFCDNDNEIQYWSINP------------------FLCTH--ITKGGTAQVRFQPRIGQLLAAASDK 654 (784)
Q Consensus 595 V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~------------------~~~~~--~~~~~v~~v~fsp~~~~Ll~~s~Dg 654 (784)
|.+++|+|++. +|++++.|+.|++||++. ..++. .+...+.+++|+|++.+|++++.|+
T Consensus 149 v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 149 ILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDS 227 (377)
T ss_dssp EEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTT
T ss_pred eEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCC
Confidence 99999999876 888899999999999852 22333 3456799999999999999999999
Q ss_pred cEEEEECCCCeE----EEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCc--e---------------------
Q 047260 655 VVSIFDIETDRQ----THSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGE--C--------------------- 707 (784)
Q Consensus 655 ~I~IwDl~t~~~----i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~--~--------------------- 707 (784)
.|++||+++++. +..+.+|...|.+++|+|++++|++++++.+.+|+..... .
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGE 307 (377)
T ss_dssp EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCC
T ss_pred cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeeccccccccccccccccc
Confidence 999999999876 7788899999999999999999999998877788775211 0
Q ss_pred ----E---------EEe----------------ccCCCceEEEEEecCCC----EEEEEECCCeEEEEEC
Q 047260 708 ----I---------QEL----------------SSNGNQFHSCVFHPSYS----TLLVVGGISSLELWNM 744 (784)
Q Consensus 708 ----i---------~~l----------------~~~~~~I~sl~fspdg~----~L~s~s~dg~I~Iwdl 744 (784)
. ..+ ..|...|.++.+.+... .|++++.||.|+|||+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 308 GREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 111 12888999999766543 5999999999999985
No 95
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.5e-32 Score=290.58 Aligned_cols=241 Identities=20% Similarity=0.340 Sum_probs=201.3
Q ss_pred ecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc-eeeeccCCCCCeEEEEEcCC-CCcEEEEEeCCCeEEEEe
Q 047260 544 TPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF-CSQAYTGHSSPIMSLDFHPK-KTDLFCFCDNDNEIQYWS 621 (784)
Q Consensus 544 ~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~-~~~~~~~h~~~V~sl~~sp~-~~~ll~sgs~dg~I~iwD 621 (784)
.+.+|.+.|++++|+|++++|++|+.|++|+|||+.++.. ....+.+|...|.+++|++. ...+|++|+.|+.|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 4568999999999999999999999999999999987642 45678899999999999864 345889999999999999
Q ss_pred CCCCe--eEEe---ecCCeeEEEEecC--CCEEEEEECCCcEEEEECCCCeE---EEEEeCCCCCEEEEEEcCC------
Q 047260 622 INPFL--CTHI---TKGGTAQVRFQPR--IGQLLAAASDKVVSIFDIETDRQ---THSLQGHAELVNYICWDTN------ 685 (784)
Q Consensus 622 l~~~~--~~~~---~~~~v~~v~fsp~--~~~Ll~~s~Dg~I~IwDl~t~~~---i~~l~~h~~~V~sl~~spd------ 685 (784)
+++.. .... +...+.+++|+|+ +..|++++.|+.|++||++.+.. ...+.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98753 3333 4577999999998 77899999999999999987632 3445678999999999997
Q ss_pred -----------CCEEEEEeCC-eEEEEeCCCC---ceEEEeccCCCceEEEEEecCC----CEEEEEECCCeEEEEECCC
Q 047260 686 -----------GDYLASVSQN-LVKVWSMASG---ECIQELSSNGNQFHSCVFHPSY----STLLVVGGISSLELWNMAE 746 (784)
Q Consensus 686 -----------g~~Lasgsdd-~I~IwDl~t~---~~i~~l~~~~~~I~sl~fspdg----~~L~s~s~dg~I~Iwdl~~ 746 (784)
+.+|++++.| .|+|||++.. +++..+.+|...|.+++|+|++ .+|++++.|++|+|||+.+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 4688888865 9999999765 4677888999999999999986 7899999999999999876
Q ss_pred Cc-----eEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 747 NK-----SMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 747 ~~-----~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.. ...+..|...|.+++|+|++++|++++.||.|+||+
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 31 124567899999999999999999999999999996
No 96
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.98 E-value=9.9e-30 Score=270.50 Aligned_cols=268 Identities=19% Similarity=0.297 Sum_probs=227.7
Q ss_pred ceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeE
Q 047260 452 RFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKV 531 (784)
Q Consensus 452 ~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I 531 (784)
.+|++| .|++|++|+...+. ...+..+.+|...|++++|+|++++||+|+.||+|
T Consensus 37 ~~lAvg-~D~tV~iWd~~tg~------------------------~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v 91 (318)
T 4ggc_A 37 NVLAVA-LDNSVYLWSASSGD------------------------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 91 (318)
T ss_dssp SEEEEE-ETTEEEEEETTTCC------------------------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEE
T ss_pred CEEEEE-eCCEEEEEECCCCC------------------------EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcE
Confidence 467666 69999999764322 11223456788999999999999999999999999
Q ss_pred EEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEE
Q 047260 532 VLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFC 611 (784)
Q Consensus 532 ~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sg 611 (784)
+|||+++++.+..+.+|...+.++.+ ++..|++++.++.+++|+..........+.+|...+.++.+.+++. +++++
T Consensus 92 ~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~ 168 (318)
T 4ggc_A 92 QLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASG 168 (318)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEE
T ss_pred EEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC-EEEEE
Confidence 99999999999999999999887766 4679999999999999999988777888899999999999999987 77889
Q ss_pred eCCCeEEEEeCCCCee-------EEeecCCeeEEEEecCCCEEE---EEECCCcEEEEECCCCeEEEEEeCCCCCEEEEE
Q 047260 612 DNDNEIQYWSINPFLC-------THITKGGTAQVRFQPRIGQLL---AAASDKVVSIFDIETDRQTHSLQGHAELVNYIC 681 (784)
Q Consensus 612 s~dg~I~iwDl~~~~~-------~~~~~~~v~~v~fsp~~~~Ll---~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~ 681 (784)
+.|+.|++||+++.+. .....+.+..+.+.+.+..++ +++.++.|++||.+......... +...+..++
T Consensus 169 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~ 247 (318)
T 4ggc_A 169 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSIL 247 (318)
T ss_dssp ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEE
T ss_pred ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeee
Confidence 9999999999986432 233446788999999877554 33457999999999887776654 777899999
Q ss_pred EcCCCCEEEEEe---CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCc
Q 047260 682 WDTNGDYLASVS---QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENK 748 (784)
Q Consensus 682 ~spdg~~Lasgs---dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~ 748 (784)
|++++..+++++ ++.|+|||+++++++.++.+|...|++++|+|++.+|++++.|++|+|||+.+..
T Consensus 248 ~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 248 WSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred ecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999888765 4599999999999999999999999999999999999999999999999987653
No 97
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=1.3e-29 Score=282.95 Aligned_cols=283 Identities=10% Similarity=0.110 Sum_probs=241.5
Q ss_pred eEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceee-----ecCCCCCCeEEEEEccCCCEEEEEeCCCe
Q 047260 498 CEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTES-----TPEDHKSVVTDVRFRPNSSQLATASVDKS 572 (784)
Q Consensus 498 ~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~-----~l~~h~~~It~i~fspdg~~Latgs~Dg~ 572 (784)
..+..+..+. .+.+++|+|++.++++++.++.|++||+.+++... .+.+|...|.+++|++++.++++++.|+.
T Consensus 114 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 192 (433)
T 3bws_A 114 RFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANA 192 (433)
T ss_dssp EEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTE
T ss_pred eEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCE
Confidence 4455555544 46699999988888888889999999999998887 45588999999999999999999999999
Q ss_pred EEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec--CCeeEEEEecCCCEEEEE
Q 047260 573 VRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK--GGTAQVRFQPRIGQLLAA 650 (784)
Q Consensus 573 I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~--~~v~~v~fsp~~~~Ll~~ 650 (784)
|++||+++++ ....+..|...+.+++|+|++..++++++.++.|++||+++.+.+..+. ..+.+++|+|++..++++
T Consensus 193 v~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 271 (433)
T 3bws_A 193 VHVFDLKTLA-YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIA 271 (433)
T ss_dssp EEEEETTTCC-EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEE
T ss_pred EEEEECCCce-EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEE
Confidence 9999999866 5566678889999999999999888888889999999999888776655 457889999999999998
Q ss_pred E--------CCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEE-e-CCeEEEEeCCCCceEEEeccCCCceEE
Q 047260 651 A--------SDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASV-S-QNLVKVWSMASGECIQELSSNGNQFHS 720 (784)
Q Consensus 651 s--------~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasg-s-dd~I~IwDl~t~~~i~~l~~~~~~I~s 720 (784)
+ .|+.|++||+++++.+..+. |...+.+++|+|++++++++ + ++.|++||+.+++.+..+. +...+.+
T Consensus 272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~ 349 (433)
T 3bws_A 272 QFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNT 349 (433)
T ss_dssp EEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEE
T ss_pred ECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCe
Confidence 8 48899999999998777663 55688999999999866544 4 4499999999999888875 5677999
Q ss_pred EEEecCCCEEEEEEC---------------CCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEEC-CCcEEEeC
Q 047260 721 CVFHPSYSTLLVVGG---------------ISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASH-DSSVKLWK 784 (784)
Q Consensus 721 l~fspdg~~L~s~s~---------------dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~-DG~V~IWd 784 (784)
++|+|+++++++++. ||.|++||+.+++.+....+...+.+++|+|++++|++++. |+.|+||+
T Consensus 350 ~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 350 IALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp EEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 999999999988887 46999999999988866656678999999999999998875 99999996
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.2e-30 Score=282.76 Aligned_cols=274 Identities=14% Similarity=0.182 Sum_probs=214.9
Q ss_pred EeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEE-EEEeCCCeEEEEcC
Q 047260 500 VGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQL-ATASVDKSVRLWDA 578 (784)
Q Consensus 500 i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~L-atgs~Dg~I~IWdl 578 (784)
+..+.+|.+.|+|++|+|||++||+|+.++ ++|||+++++....... ..+..++|.++++.+ ++++.|++|+|||+
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEET
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEEC
Confidence 445678999999999999999999998775 78999998776655432 257888999888877 56778899999999
Q ss_pred CCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC-eeEEeecCCeeEEEEecCCCEEEEE--ECCCc
Q 047260 579 ANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF-LCTHITKGGTAQVRFQPRIGQLLAA--ASDKV 655 (784)
Q Consensus 579 ~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~-~~~~~~~~~v~~v~fsp~~~~Ll~~--s~Dg~ 655 (784)
.+++ ....+. +...|.++.|+++. ++++. ++.|++||+.+. +.+..+......+++++ ..++++ +.||.
T Consensus 89 ~~~~-~~~~~~-~~~~v~~v~~~~~~---~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~g~ 160 (355)
T 3vu4_A 89 VKKQ-DVSRIK-VDAPVKDLFLSREF---IVVSY-GDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNLGQ 160 (355)
T ss_dssp TTTE-EEEEEE-CSSCEEEEEECSSE---EEEEE-TTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCTTC
T ss_pred CCCc-EEEEEE-CCCceEEEEEcCCE---EEEEE-cCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcCcE
Confidence 9876 444444 66799999998763 33333 889999999876 55544444445566777 566664 56999
Q ss_pred EEEEECCCCe---------------E-EEEEeCCCCCEEEEEEcCCCCEEEEEeCC-e-EEEEeCCCCceEEEec-c-CC
Q 047260 656 VSIFDIETDR---------------Q-THSLQGHAELVNYICWDTNGDYLASVSQN-L-VKVWSMASGECIQELS-S-NG 715 (784)
Q Consensus 656 I~IwDl~t~~---------------~-i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~-I~IwDl~t~~~i~~l~-~-~~ 715 (784)
|++||+++++ + +..+.+|...|++++|+|+|.+|++++.| + |+|||+++++++.++. + |.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 9999999865 2 67889999999999999999999999966 7 9999999999999998 5 89
Q ss_pred CceEEEEEecCCCEEEEEECCCeEEEEECCCCceE---Ee--------------------c-ccCCceEEEEEeCCCCEE
Q 047260 716 NQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM---TI--------------------A-AHENIISALAQSPVTGMV 771 (784)
Q Consensus 716 ~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~---~~--------------------~-~h~~~V~slafspdg~~L 771 (784)
..|.+++|+|++.+|++++.|++|+|||+...... .+ . .+......++|++++++|
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l 320 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV 320 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE
Confidence 99999999999999999999999999999765321 10 0 112234679999999999
Q ss_pred EEEECCCcEEEeC
Q 047260 772 ASASHDSSVKLWK 784 (784)
Q Consensus 772 aSgs~DG~V~IWd 784 (784)
++++.||.+++|+
T Consensus 321 ~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 321 VVWPHTRMIETFK 333 (355)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEEeCCCeEEEEE
Confidence 9999999999985
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=8.4e-30 Score=286.47 Aligned_cols=276 Identities=19% Similarity=0.370 Sum_probs=222.6
Q ss_pred CceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCe
Q 047260 451 DRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRK 530 (784)
Q Consensus 451 ~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~ 530 (784)
..++.+|+.|+.+++|+.... ..+..+.+|.+.|++++| ++++|++|+.||.
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~--------------------------~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~ 194 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTL--------------------------ECKRILTGHTGSVLCLQY--DERVIITGSSDST 194 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSC--------------------------CEEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred CCEEEEEeCCCeEEEEeCCCC--------------------------eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCe
Confidence 456668999999999976322 245667889999999999 7889999999999
Q ss_pred EEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcce--eeeccCCCCCeEEEEEcCCCCcEE
Q 047260 531 VVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFC--SQAYTGHSSPIMSLDFHPKKTDLF 608 (784)
Q Consensus 531 I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~--~~~~~~h~~~V~sl~~sp~~~~ll 608 (784)
|+|||+.+++.+..+..|...|.+++|+ +.+|++|+.||.|++||+.++... ...+.+|...|.+++|. + .++
T Consensus 195 i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l 269 (435)
T 1p22_A 195 VRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--D-KYI 269 (435)
T ss_dssp EEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--T-TEE
T ss_pred EEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--C-CEE
Confidence 9999999999999999999999999997 459999999999999999876633 26677899999999993 3 388
Q ss_pred EEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCC
Q 047260 609 CFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTN 685 (784)
Q Consensus 609 ~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spd 685 (784)
++++.||.|++||+++...+..+. ..+.++.+ ++..+++++.||.|++||+++++.+..+.+|...|.+++| +
T Consensus 270 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~ 345 (435)
T 1p22_A 270 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--D 345 (435)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--C
T ss_pred EEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--c
Confidence 899999999999999887776654 56777777 4689999999999999999999999999999999999999 7
Q ss_pred CCEEEEEeCC-eEEEEeCCCCc---------eEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEeccc
Q 047260 686 GDYLASVSQN-LVKVWSMASGE---------CIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAAH 755 (784)
Q Consensus 686 g~~Lasgsdd-~I~IwDl~t~~---------~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h 755 (784)
+.+|++++.+ .|++||+.++. ++..+..|...|.+++| ++.+|++++.||.|++||+.+.........
T Consensus 346 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 423 (435)
T 1p22_A 346 NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 423 (435)
T ss_dssp SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC------------
T ss_pred CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCC
Confidence 8899998855 99999997765 88999999999999999 677899999999999999988776644444
Q ss_pred CCceEEEEEe
Q 047260 756 ENIISALAQS 765 (784)
Q Consensus 756 ~~~V~slafs 765 (784)
..++.++.|.
T Consensus 424 ~~~~~~~~~~ 433 (435)
T 1p22_A 424 RSPSRTYTYI 433 (435)
T ss_dssp ----------
T ss_pred CCCccceeee
Confidence 4555555554
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-29 Score=283.75 Aligned_cols=270 Identities=14% Similarity=0.135 Sum_probs=222.4
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---eeeecC--------------------------------------
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ---TESTPE-------------------------------------- 546 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~---~~~~l~-------------------------------------- 546 (784)
.+|.|++|++||++|+++ .++.|++||+.+++ .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468999999999976655 57899999999888 554443
Q ss_pred ----------------CCCCCeEEEEEccCCCEE-EEEeCCCeEEEEcCC--CCcceeeecc--CCCCCeEEEEEcCCCC
Q 047260 547 ----------------DHKSVVTDVRFRPNSSQL-ATASVDKSVRLWDAA--NPNFCSQAYT--GHSSPIMSLDFHPKKT 605 (784)
Q Consensus 547 ----------------~h~~~It~i~fspdg~~L-atgs~Dg~I~IWdl~--~~~~~~~~~~--~h~~~V~sl~~sp~~~ 605 (784)
.|...|++++|+|++++| ++++.||.|+|||+. ++. ....+. .|...|.+++|+|++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN-VLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS-CEEEEEEEECSSCEEEEEECTTSS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc-eeeeeecccCCCCceEEEEcCCCC
Confidence 234479999999999996 889999999999998 655 444444 6778999999999987
Q ss_pred cEEEEEeCCCeEEEEeCCCCee-------EEeecCCeeEEEEecC---CCEEEEEECCCcEEEEECCCCeEEEE-EeCCC
Q 047260 606 DLFCFCDNDNEIQYWSINPFLC-------THITKGGTAQVRFQPR---IGQLLAAASDKVVSIFDIETDRQTHS-LQGHA 674 (784)
Q Consensus 606 ~ll~sgs~dg~I~iwDl~~~~~-------~~~~~~~v~~v~fsp~---~~~Ll~~s~Dg~I~IwDl~t~~~i~~-l~~h~ 674 (784)
+|++++.+|.|++|++..... +..+...+.+++|+|+ +.+|++++.|+.|++||+++++.+.. +.+|.
T Consensus 163 -~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 163 -TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp -EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred -EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 777888899999999976543 3445688999999999 88999999999999999999988877 55899
Q ss_pred CCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEecc-------------------------CCCceEEEEEecCCC
Q 047260 675 ELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSS-------------------------NGNQFHSCVFHPSYS 728 (784)
Q Consensus 675 ~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~-------------------------~~~~I~sl~fspdg~ 728 (784)
..|.+++|+ ++.+|++++.+ .|+|||+.+++++..+.. ....|.+++|+|+++
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 999999999 99999999966 999999999998888762 235689999999999
Q ss_pred EEEEEE-CCCeEEEEEC--CCC---ceE-EecccCCceEEEEEeCCCCEEEEEEC-------CCcEEEe
Q 047260 729 TLLVVG-GISSLELWNM--AEN---KSM-TIAAHENIISALAQSPVTGMVASASH-------DSSVKLW 783 (784)
Q Consensus 729 ~L~s~s-~dg~I~Iwdl--~~~---~~~-~~~~h~~~V~slafspdg~~LaSgs~-------DG~V~IW 783 (784)
+|++++ .++.|+||++ ..+ ..+ .+..| +.|.+++|+|++ ++++++. +..|.||
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~ 387 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFI 387 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEE
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEE
Confidence 999999 8899999999 554 333 45556 889999999954 5555433 4557777
No 101
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=7.9e-30 Score=285.35 Aligned_cols=288 Identities=13% Similarity=0.233 Sum_probs=227.3
Q ss_pred CcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCC-----------
Q 047260 439 SLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRN----------- 507 (784)
Q Consensus 439 ~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~----------- 507 (784)
..++++.+.++.. ++++|+.|+.|++|+....... .......+..+..+.+|.
T Consensus 29 ~~V~~v~~s~~g~-~la~g~~dg~v~iw~~~~~~~~---------------~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 92 (447)
T 3dw8_B 29 DIISTVEFNHSGE-LLATGDKGGRVVIFQQEQENKI---------------QSHSRGEYNVYSTFQSHEPEFDYLKSLEI 92 (447)
T ss_dssp GSEEEEEECSSSS-EEEEEETTSEEEEEEECC--------------------CCCCCCEEEEEEEECCCCEEEGGGTEEE
T ss_pred CcEEEEEECCCCC-EEEEEcCCCeEEEEEecCCCCC---------------CcccccceeEecccccccccccccccccc
Confidence 4456666766554 4557999999999988543310 011223456678888998
Q ss_pred -CceEEEEEcCCC--CEEEEEeCCCeEEEEECCCCcee----------------------------------------ee
Q 047260 508 -SKVTCCHFSSDG--KLLASSGHDRKVVLWNMDTLQTE----------------------------------------ST 544 (784)
Q Consensus 508 -~~V~~l~fspdg--~~Lasgs~Dg~I~IWd~~t~~~~----------------------------------------~~ 544 (784)
+.|++++|+|++ .+|++++.|+.|+|||+.++... ..
T Consensus 93 ~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
T 3dw8_B 93 EEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF 172 (447)
T ss_dssp CCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE
T ss_pred cCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe
Confidence 889999999998 79999999999999998764332 11
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceee-------eccCCCCCeEEEEEcCCCCcEEEEEeCCCeE
Q 047260 545 PEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQ-------AYTGHSSPIMSLDFHPKKTDLFCFCDNDNEI 617 (784)
Q Consensus 545 l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~-------~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I 617 (784)
..+|...|++++|+|++++|++| .|+.|+|||++....... .+.+|...|.+++|+|++..+|++++.||.|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 36899999999999999999998 799999999985443333 3668999999999999986699999999999
Q ss_pred EEEeCCCCee----EEeec---C------------CeeEEEEecCCCEEEEEECCCcEEEEECCC-CeEEEEEeCCCCC-
Q 047260 618 QYWSINPFLC----THITK---G------------GTAQVRFQPRIGQLLAAASDKVVSIFDIET-DRQTHSLQGHAEL- 676 (784)
Q Consensus 618 ~iwDl~~~~~----~~~~~---~------------~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t-~~~i~~l~~h~~~- 676 (784)
++||+++... ...+. . .+.+++|+|++.+|++++. +.|++||+++ ++++..+.+|...
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccc
Confidence 9999987664 33333 2 7899999999999999999 9999999997 8888888887542
Q ss_pred --------------EEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEec-----------------------------
Q 047260 677 --------------VNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELS----------------------------- 712 (784)
Q Consensus 677 --------------V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~----------------------------- 712 (784)
+..++|+|++.+|++++.+ .|+|||+.+++.+....
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISV 410 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEG
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccc
Confidence 3349999999999999865 99999999987763211
Q ss_pred ---cCCCceEEEEEecCCCEEEEEECCCeEEEEECC
Q 047260 713 ---SNGNQFHSCVFHPSYSTLLVVGGISSLELWNMA 745 (784)
Q Consensus 713 ---~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~ 745 (784)
.....|..++|+|++.+|++++.++ +++|..+
T Consensus 411 ~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 411 DSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp GGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 1234688999999999998887775 8888654
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-30 Score=283.68 Aligned_cols=261 Identities=10% Similarity=0.068 Sum_probs=213.2
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCC---------CCcce
Q 047260 514 HFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAA---------NPNFC 584 (784)
Q Consensus 514 ~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~---------~~~~~ 584 (784)
.+.+++.+|++|+.||.|+|||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +....
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 344678899999999999999999998888775 567888899988 9999999999999766 33323
Q ss_pred eeeccCCCCCeEEEEEcC--CCCcEEEEEeCCCeEEEEeCCCCeeEEee----cCCeeEEEEecCCCEEEEEECCCcEEE
Q 047260 585 SQAYTGHSSPIMSLDFHP--KKTDLFCFCDNDNEIQYWSINPFLCTHIT----KGGTAQVRFQPRIGQLLAAASDKVVSI 658 (784)
Q Consensus 585 ~~~~~~h~~~V~sl~~sp--~~~~ll~sgs~dg~I~iwDl~~~~~~~~~----~~~v~~v~fsp~~~~Ll~~s~Dg~I~I 658 (784)
.....+|...|.+++|+| ++. ++++++.||.|++||+++.++.... ...+.+++|+|++.+|++|+.||.|++
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 333447778999999999 776 7888999999999999988876544 246899999999999999999999999
Q ss_pred EECCCCeEE-EEEeC-CCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEecc---CCCceE--EEEEecCCCEEE
Q 047260 659 FDIETDRQT-HSLQG-HAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSS---NGNQFH--SCVFHPSYSTLL 731 (784)
Q Consensus 659 wDl~t~~~i-~~l~~-h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~---~~~~I~--sl~fspdg~~L~ 731 (784)
||+++++.+ ..+.. |...|++++|+|++.+|++++++.|+|||+++++++..+.. +...+. +++|+|++++|+
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 276 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMI 276 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEE
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEE
Confidence 999999877 78888 99999999999999999999988999999999877655443 333343 699999999999
Q ss_pred EEEC-CCeEEEEECCCCceEEecccCCceEEEEEeC---CCCEEEEEECCCcEEEe
Q 047260 732 VVGG-ISSLELWNMAENKSMTIAAHENIISALAQSP---VTGMVASASHDSSVKLW 783 (784)
Q Consensus 732 s~s~-dg~I~Iwdl~~~~~~~~~~h~~~V~slafsp---dg~~LaSgs~DG~V~IW 783 (784)
+++. |+.|+||++......... ..+..++|.+ +...|++++.||.+.++
T Consensus 277 ~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 277 AYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EEETTTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred EecCCCCcEEEEEEcccccceEe---cCceeEecCccccccceeEEEecCCceEEE
Confidence 9998 999999999765433111 5677888888 77888888889888775
No 103
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.2e-29 Score=285.16 Aligned_cols=242 Identities=19% Similarity=0.348 Sum_probs=209.0
Q ss_pred eecCCCCCCeEEEEEccC-CCEEEEEeCCCeEEEEcCCCC---------cceeeeccCCCCCeEEEEEcCCCCcEEEEEe
Q 047260 543 STPEDHKSVVTDVRFRPN-SSQLATASVDKSVRLWDAANP---------NFCSQAYTGHSSPIMSLDFHPKKTDLFCFCD 612 (784)
Q Consensus 543 ~~l~~h~~~It~i~fspd-g~~Latgs~Dg~I~IWdl~~~---------~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs 612 (784)
.....|.+.|++++|+|+ +.+|++++.||.|+|||+... ......+.+|...|.+++|+|++..+|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 334579999999999997 789999999999999999762 2355667799999999999999888999999
Q ss_pred CCCeEEEEeCCCC----------eeEEeecCCeeEEEEec-CCCEEEEEECCCcEEEEECCCC---eEEEEEeCCCCCEE
Q 047260 613 NDNEIQYWSINPF----------LCTHITKGGTAQVRFQP-RIGQLLAAASDKVVSIFDIETD---RQTHSLQGHAELVN 678 (784)
Q Consensus 613 ~dg~I~iwDl~~~----------~~~~~~~~~v~~v~fsp-~~~~Ll~~s~Dg~I~IwDl~t~---~~i~~l~~h~~~V~ 678 (784)
.||.|++||++.. .....+...+.+++|+| ++..|++++.|+.|++||++++ +.+..+..|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 9999999999862 22234557799999999 6678888999999999999987 57778888999999
Q ss_pred EEEEcCCCC-EEEEEeCC-eEEEEeCCC-CceEEEeccCCCceEEEEEecCCC-EEEEEECCCeEEEEECCCC-------
Q 047260 679 YICWDTNGD-YLASVSQN-LVKVWSMAS-GECIQELSSNGNQFHSCVFHPSYS-TLLVVGGISSLELWNMAEN------- 747 (784)
Q Consensus 679 sl~~spdg~-~Lasgsdd-~I~IwDl~t-~~~i~~l~~~~~~I~sl~fspdg~-~L~s~s~dg~I~Iwdl~~~------- 747 (784)
+++|+|++. +|++++.+ .|+|||+++ ..++..+..|...|.+++|+|+++ +|++++.|+.|+|||+...
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 999999987 67787755 999999998 567889999999999999999995 5889999999999999872
Q ss_pred -------ceE-EecccCCceEEEEEeCCCC-EEEEEECCCcEEEeC
Q 047260 748 -------KSM-TIAAHENIISALAQSPVTG-MVASASHDSSVKLWK 784 (784)
Q Consensus 748 -------~~~-~~~~h~~~V~slafspdg~-~LaSgs~DG~V~IWd 784 (784)
..+ ...+|...|++++|+|++. +|++++.||.|+||+
T Consensus 362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 333 5668999999999999999 999999999999996
No 104
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-30 Score=292.84 Aligned_cols=261 Identities=17% Similarity=0.248 Sum_probs=216.2
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCceeeec-CCCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEcCCC---Cccee-eec
Q 047260 515 FSSDGKLLASSGHDRKVVLWNMDTLQTESTP-EDHKSVVTDVRFRP-NSSQLATASVDKSVRLWDAAN---PNFCS-QAY 588 (784)
Q Consensus 515 fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l-~~h~~~It~i~fsp-dg~~Latgs~Dg~I~IWdl~~---~~~~~-~~~ 588 (784)
|+|++..+++++ +|+. +++.+..+ .+|.+.|++++|+| ++++|++|+.||+|+|||+.+ +.... ...
T Consensus 35 f~~~~~~~~~~~------~w~~-~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 107 (437)
T 3gre_A 35 FGPIQEIVRSPN------MGNL-RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT 107 (437)
T ss_dssp GCCCCCCCCCCC------GGGC-CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE
T ss_pred cCCccccccccc------cccc-cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee
Confidence 677887777654 3874 46778888 88999999999999 999999999999999999876 32111 122
Q ss_pred cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCC---CCeeEEe---------------ecCCeeEEE--EecCCCEEE
Q 047260 589 TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSIN---PFLCTHI---------------TKGGTAQVR--FQPRIGQLL 648 (784)
Q Consensus 589 ~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~---~~~~~~~---------------~~~~v~~v~--fsp~~~~Ll 648 (784)
.+|...|.+++|+|++. +|++++.||.|++||++ ....... ....+.++. +++++..|+
T Consensus 108 ~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 108 YDCSSTVTQITMIPNFD-AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp EECSSCEEEEEECTTSS-EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEE
T ss_pred ccCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEE
Confidence 25899999999999876 78899999999999994 3322221 123445555 557889999
Q ss_pred EEECCCcEEEEECCCCeEEEEEeC--CCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEec-cCCCceEEEEEe
Q 047260 649 AAASDKVVSIFDIETDRQTHSLQG--HAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELS-SNGNQFHSCVFH 724 (784)
Q Consensus 649 ~~s~Dg~I~IwDl~t~~~i~~l~~--h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~-~~~~~I~sl~fs 724 (784)
+++.|+.|++||+++++.+..+.. |...|++++|+|++.+|++++.+ .|++||+++++++.++. .|...|.+++|+
T Consensus 187 ~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 266 (437)
T 3gre_A 187 ALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVC 266 (437)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEEC
T ss_pred EEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEec
Confidence 999999999999999999999988 88999999999999999999966 99999999999999886 777899999666
Q ss_pred c----CCCEEEEEECCCeEEEEECCCCceE-Eecc--------------------------cCCceEEEEEeCCCCEEEE
Q 047260 725 P----SYSTLLVVGGISSLELWNMAENKSM-TIAA--------------------------HENIISALAQSPVTGMVAS 773 (784)
Q Consensus 725 p----dg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~--------------------------h~~~V~slafspdg~~LaS 773 (784)
| ++.+|++++.|+.|++||+.+++++ .+.. |...|++++|+ ++++|++
T Consensus 267 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s 345 (437)
T 3gre_A 267 QFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLT 345 (437)
T ss_dssp TTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEE
T ss_pred cccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEe
Confidence 5 5779999999999999999988765 2221 66779999999 7789999
Q ss_pred EECCCcEEEeC
Q 047260 774 ASHDSSVKLWK 784 (784)
Q Consensus 774 gs~DG~V~IWd 784 (784)
|+.||.|++||
T Consensus 346 ~~~d~~i~~wd 356 (437)
T 3gre_A 346 DEATSSIVMFS 356 (437)
T ss_dssp EGGGTEEEEEE
T ss_pred cCCCCeEEEEE
Confidence 99999999997
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4.5e-30 Score=285.13 Aligned_cols=277 Identities=16% Similarity=0.194 Sum_probs=225.7
Q ss_pred cCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcC-CCCEEEEEe
Q 047260 448 EDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSS-DGKLLASSG 526 (784)
Q Consensus 448 ~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fsp-dg~~Lasgs 526 (784)
++...++.+++.|+.+.+|+....+ +. ...+..+.+|.+.|++++|+| ++++|++|+
T Consensus 44 ~~~~~~~~~~~~~g~i~v~~~~~~~--~~--------------------~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s 101 (402)
T 2aq5_A 44 PKFMALICEASGGGAFLVLPLGKTG--RV--------------------DKNVPLVCGHTAPVLDIAWCPHNDNVIASGS 101 (402)
T ss_dssp SSEEEEEBCCSSSCCEEEEETTCCE--EC--------------------CTTCCCBCCCSSCEEEEEECTTCTTEEEEEE
T ss_pred CCeEEEEEEEcCCCEEEEEECccCC--CC--------------------CCCCceEecCCCCEEEEEeCCCCCCEEEEEe
Confidence 4444555568899999999763321 00 012344678999999999999 999999999
Q ss_pred CCCeEEEEECCCC-------ceeeecCCCCCCeEEEEEccCC-CEEEEEeCCCeEEEEcCCCCcceeeec--cCCCCCeE
Q 047260 527 HDRKVVLWNMDTL-------QTESTPEDHKSVVTDVRFRPNS-SQLATASVDKSVRLWDAANPNFCSQAY--TGHSSPIM 596 (784)
Q Consensus 527 ~Dg~I~IWd~~t~-------~~~~~l~~h~~~It~i~fspdg-~~Latgs~Dg~I~IWdl~~~~~~~~~~--~~h~~~V~ 596 (784)
.||.|+|||+.++ +.+..+.+|...|++++|+|++ .+|++++.|+.|+|||+++++ ....+ .+|...|.
T Consensus 102 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~ 180 (402)
T 2aq5_A 102 EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-AVLTLGPDVHPDTIY 180 (402)
T ss_dssp TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-EEEEECTTTCCSCEE
T ss_pred CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-ccEEEecCCCCCceE
Confidence 9999999999987 5677888999999999999998 699999999999999999876 55556 78999999
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee-c---C-CeeEEEEecCCCEEEEE---ECCCcEEEEECCCCeE-E
Q 047260 597 SLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT-K---G-GTAQVRFQPRIGQLLAA---ASDKVVSIFDIETDRQ-T 667 (784)
Q Consensus 597 sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~-~---~-~v~~v~fsp~~~~Ll~~---s~Dg~I~IwDl~t~~~-i 667 (784)
+++|+|++. +|++++.|+.|++||+++...+..+ . + .+.++.|+|++.+|+++ +.|+.|++||+++.+. +
T Consensus 181 ~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~ 259 (402)
T 2aq5_A 181 SVDWSRDGA-LICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL 259 (402)
T ss_dssp EEEECTTSS-CEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS
T ss_pred EEEECCCCC-EEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc
Confidence 999999887 6778889999999999998877665 2 2 37899999998888888 5799999999998654 3
Q ss_pred EEEe-CCCCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCCCce-EEEecc--CCCceEEEEEecCCCEEEEEECCCeEEE
Q 047260 668 HSLQ-GHAELVNYICWDTNGDYLASVS--QNLVKVWSMASGEC-IQELSS--NGNQFHSCVFHPSYSTLLVVGGISSLEL 741 (784)
Q Consensus 668 ~~l~-~h~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t~~~-i~~l~~--~~~~I~sl~fspdg~~L~s~s~dg~I~I 741 (784)
.... .|...|.+++|+|++.+|++++ ++.|++||+.+++. +..+.. +...|.+++|+|++.++++ .++.+++
T Consensus 260 ~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~ 337 (402)
T 2aq5_A 260 SLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARF 337 (402)
T ss_dssp EEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEE
T ss_pred eEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEE
Confidence 3333 4778899999999999987544 55999999999874 444443 4588999999999987654 5679999
Q ss_pred EECCCCceE
Q 047260 742 WNMAENKSM 750 (784)
Q Consensus 742 wdl~~~~~~ 750 (784)
|++.++.+.
T Consensus 338 ~~l~~~~~~ 346 (402)
T 2aq5_A 338 YKLHERKCE 346 (402)
T ss_dssp EEEETTEEE
T ss_pred EEcCCCcEE
Confidence 999887654
No 106
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=3.9e-29 Score=269.03 Aligned_cols=275 Identities=11% Similarity=0.119 Sum_probs=230.5
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEE
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHF 515 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~f 515 (784)
++...+.+..+.++...+ .+++.|+.+++|+..... ....+..+.+|...|++++|
T Consensus 9 ~h~~~v~~~~~s~~~~~l-~~~~~d~~v~iw~~~~~~-----------------------~~~~~~~~~~~~~~v~~~~~ 64 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLL-LITSWDGSLTVYKFDIQA-----------------------KNVDLLQSLRYKHPLLCCNF 64 (342)
T ss_dssp CCSSCEEEEEEEGGGTEE-EEEETTSEEEEEEEETTT-----------------------TEEEEEEEEECSSCEEEEEE
T ss_pred CCCCcEEEEEEcCCCCEE-EEEcCCCeEEEEEeCCCC-----------------------ccccceeeeecCCceEEEEE
Confidence 344556667776765544 568899999999875432 01223445689999999999
Q ss_pred cCCCC-EEEEEeCCCeEEEEEC-CCCceeeecCC--CCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCC---------Cc
Q 047260 516 SSDGK-LLASSGHDRKVVLWNM-DTLQTESTPED--HKSVVTDVRFRPNSSQLATASVDKSVRLWDAAN---------PN 582 (784)
Q Consensus 516 spdg~-~Lasgs~Dg~I~IWd~-~t~~~~~~l~~--h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~---------~~ 582 (784)
+|+++ +|++|+.||.|++||+ .+++. ..+.. |...|++++|+| +.+|++++.|+.|++||+++ .+
T Consensus 65 ~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 142 (342)
T 1yfq_A 65 IDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142 (342)
T ss_dssp EESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES
T ss_pred CCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC
Confidence 99999 9999999999999999 87655 67778 999999999999 99999999999999999986 44
Q ss_pred ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-Cee-----EEeecCCeeEEEEec-CCCEEEEEECCCc
Q 047260 583 FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP-FLC-----THITKGGTAQVRFQP-RIGQLLAAASDKV 655 (784)
Q Consensus 583 ~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~-~~~-----~~~~~~~v~~v~fsp-~~~~Ll~~s~Dg~ 655 (784)
+...+. |...|.+++|++++ +++++.|+.|++||++. ... ...+...+.+++|+| ++..+++++.||.
T Consensus 143 -~~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 217 (342)
T 1yfq_A 143 -NSNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217 (342)
T ss_dssp -CSSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred -eeeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc
Confidence 334444 88999999999876 88889999999999987 332 123456899999999 9999999999999
Q ss_pred EEEEECCCC------eEEEEEeCCCC---------CEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccC-CCce
Q 047260 656 VSIFDIETD------RQTHSLQGHAE---------LVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSN-GNQF 718 (784)
Q Consensus 656 I~IwDl~t~------~~i~~l~~h~~---------~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~-~~~I 718 (784)
|++||++.. +....+..|.. .|.+++|+|++++|++++.+ .|++||+.+++++..+..| ...|
T Consensus 218 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v 297 (342)
T 1yfq_A 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSV 297 (342)
T ss_dssp EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEE
T ss_pred EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCc
Confidence 999999887 77888888765 99999999999999999865 9999999999999999998 9999
Q ss_pred EEEEEecCCCEEEEEECCCe-EEEEE
Q 047260 719 HSCVFHPSYSTLLVVGGISS-LELWN 743 (784)
Q Consensus 719 ~sl~fspdg~~L~s~s~dg~-I~Iwd 743 (784)
.+++ |++.+|++++.||. .+.|.
T Consensus 298 ~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 298 VKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred eEec--CCCCeEEEEecCCccccccc
Confidence 9999 99999999999998 55544
No 107
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6e-31 Score=303.96 Aligned_cols=253 Identities=11% Similarity=0.030 Sum_probs=199.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCcee----eecCCCCCCeEEEEEccC------CCEEEEEeCCCeEEEEcCCCCcc---
Q 047260 517 SDGKLLASSGHDRKVVLWNMDTLQTE----STPEDHKSVVTDVRFRPN------SSQLATASVDKSVRLWDAANPNF--- 583 (784)
Q Consensus 517 pdg~~Lasgs~Dg~I~IWd~~t~~~~----~~l~~h~~~It~i~fspd------g~~Latgs~Dg~I~IWdl~~~~~--- 583 (784)
|++..|++++.|++|+|||+.+++.. ..+..|.+.|.+|+|+|+ +.+||+++.||+|+|||+.++..
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~ 250 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH 250 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc
Confidence 33344555668899999999876642 345678899999999996 57999999999999999986542
Q ss_pred -------eeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe----eEEeecCCeeEE--EEecCC-CEEEE
Q 047260 584 -------CSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL----CTHITKGGTAQV--RFQPRI-GQLLA 649 (784)
Q Consensus 584 -------~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~----~~~~~~~~v~~v--~fsp~~-~~Ll~ 649 (784)
....+.+|...|++++|++++ .|++|+.||.|++||+++.. ....+...|.+| .|++++ ..|++
T Consensus 251 ~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 251 VFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp EEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred cceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE
Confidence 123567899999999999864 79999999999999998542 244566889998 567887 78999
Q ss_pred EECCCcEEEEECCCCeEEEEEeCCCC--CEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecC
Q 047260 650 AASDKVVSIFDIETDRQTHSLQGHAE--LVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPS 726 (784)
Q Consensus 650 ~s~Dg~I~IwDl~t~~~i~~l~~h~~--~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspd 726 (784)
++.|++|+|||+++++++..+.+|.. .|.+++|+|++..|++++++ +|+|||++++.++.++.+|...|.+++|+|+
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 99999999999999877766766653 58899999999999988866 9999999999998899999999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCceEEec-----ccCCceEEEEEeCCCCEE
Q 047260 727 YSTLLVVGGISSLELWNMAENKSMTIA-----AHENIISALAQSPVTGMV 771 (784)
Q Consensus 727 g~~L~s~s~dg~I~Iwdl~~~~~~~~~-----~h~~~V~slafspdg~~L 771 (784)
+++|++|+.|++|++||+......... .+...|.+++|+|++..+
T Consensus 409 g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 409 HPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp CCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEE
T ss_pred CCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeE
Confidence 999999999999999998764221111 122257899999999855
No 108
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2e-29 Score=277.73 Aligned_cols=284 Identities=12% Similarity=0.151 Sum_probs=211.6
Q ss_pred ccccccccCCCceEecccc-------CCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEE
Q 047260 441 ASASNLLEDIDRFADVGSI-------DENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCC 513 (784)
Q Consensus 441 ~ss~~~~~~~~~ll~~gS~-------D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l 513 (784)
+.+..|.++... +.+|+. ++.+++|.......... ..+.......+.+|...|.|+
T Consensus 17 V~sv~fs~dg~~-l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~v~s~ 79 (365)
T 4h5i_A 17 AYGAKFLNNDTL-LVAGGGGEGNNGIPNKLTVLRVDPTKDTEK----------------EQFHILSEFALEDNDDSPTAI 79 (365)
T ss_dssp EEEEEEEETTEE-EEEEECCSSSSSCCEEEEEEEECTTSSSHH----------------HHEEEEEEEECCTTSCCCCEE
T ss_pred EEEEEEeCCCcE-EEEECCCccccCCCCEEEEEEEcCCCccee----------------eeeeeeeEEEccCCCCceEEE
Confidence 445666666544 445543 33588887754331111 001112223577899999998
Q ss_pred EEcCCCCEEEEEe-----------CCCeEEEEECCCCceee----e-----cCCCCCCeEEEEEccCCCEEEEEe--CCC
Q 047260 514 HFSSDGKLLASSG-----------HDRKVVLWNMDTLQTES----T-----PEDHKSVVTDVRFRPNSSQLATAS--VDK 571 (784)
Q Consensus 514 ~fspdg~~Lasgs-----------~Dg~I~IWd~~t~~~~~----~-----l~~h~~~It~i~fspdg~~Latgs--~Dg 571 (784)
+++ ++.+++|+ .|+.|++|++.+..... . ...+...+.+++|+|||++|++++ .|+
T Consensus 80 ~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~ 157 (365)
T 4h5i_A 80 DAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPA 157 (365)
T ss_dssp EEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSC
T ss_pred EeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCC
Confidence 875 55677654 47789999986543211 1 123456799999999999987654 689
Q ss_pred eEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe-----ecCCeeEEEEecCCCE
Q 047260 572 SVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI-----TKGGTAQVRFQPRIGQ 646 (784)
Q Consensus 572 ~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~-----~~~~v~~v~fsp~~~~ 646 (784)
+|+|||+++.. +...+ .|...|.+++|+|++. ++++++.+ .+++|+..+...... +...+.+++|+|++..
T Consensus 158 ~i~iwd~~~~~-~~~~~-~~~~~V~~v~fspdg~-~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~ 233 (365)
T 4h5i_A 158 IMRIIDPSDLT-EKFEI-ETRGEVKDLHFSTDGK-VVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV 233 (365)
T ss_dssp EEEEEETTTTE-EEEEE-ECSSCCCEEEECTTSS-EEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE
T ss_pred EEEEeECCCCc-EEEEe-CCCCceEEEEEccCCc-eEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE
Confidence 99999999876 34444 4778899999999987 66777744 566666655544332 2245789999999999
Q ss_pred EEEEECCC----cEEEEECCCCeE----EEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEe-ccCCC
Q 047260 647 LLAAASDK----VVSIFDIETDRQ----THSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQEL-SSNGN 716 (784)
Q Consensus 647 Ll~~s~Dg----~I~IwDl~t~~~----i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l-~~~~~ 716 (784)
+++++.|+ .+++||+..... ...+.+|...|++++|+|+|++|++++.| .|+|||+.+++++.++ .+|..
T Consensus 234 l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~ 313 (365)
T 4h5i_A 234 LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSF 313 (365)
T ss_dssp EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSS
T ss_pred EEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccC
Confidence 99999876 688899877643 45677899999999999999999999966 9999999999999886 68999
Q ss_pred ceEEEEEecCCCEEEEEECCCeEEEEECCCC
Q 047260 717 QFHSCVFHPSYSTLLVVGGISSLELWNMAEN 747 (784)
Q Consensus 717 ~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~ 747 (784)
.|++++|+||+++|++++.|++|+|||+..+
T Consensus 314 ~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 314 AITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999999999999999999999654
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=289.25 Aligned_cols=259 Identities=11% Similarity=0.103 Sum_probs=210.8
Q ss_pred cCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcce
Q 047260 505 SRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFC 584 (784)
Q Consensus 505 ~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~ 584 (784)
.-...|.+++|+|||+++|+++.|++|+ |...++ .+.+|...|.+++|+|+| .++.+.+|+.+...
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~-- 78 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG-- 78 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC--
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC-------CcceEEEEeCCCce--
Confidence 4567899999999999999999999999 755554 447999999999999998 45555555543211
Q ss_pred eeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecC-----CeeEEEEecCCCEEEEEECCCcEEEE
Q 047260 585 SQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKG-----GTAQVRFQPRIGQLLAAASDKVVSIF 659 (784)
Q Consensus 585 ~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~-----~v~~v~fsp~~~~Ll~~s~Dg~I~Iw 659 (784)
.....|...|.+++|+|+|. .+++++.||.|++||.........+.. .+.+++|+|+|.+|++++.||+|+||
T Consensus 79 -~~~~~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 79 -LLNSQPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF 156 (588)
T ss_dssp -SSTTSCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred -EeecCCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 12225688899999999988 777899999999999765222212222 48999999999999999999999999
Q ss_pred ECCCCe-------EEEEE----eCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCce---EEEe-ccCCCceEEEEEe
Q 047260 660 DIETDR-------QTHSL----QGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGEC---IQEL-SSNGNQFHSCVFH 724 (784)
Q Consensus 660 Dl~t~~-------~i~~l----~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~---i~~l-~~~~~~I~sl~fs 724 (784)
|+..+. .+..+ .+|...|.+++|+|+| +++++.|++|++||+..+.. ..++ ..|...|.+++|+
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 999875 36676 5677899999999999 55555566999999988773 4566 4778899999999
Q ss_pred cCCCEEEEEECCCeEEEEECCCCceEE-ecccCCceEEEEE--eCCCCEEEEEECCCcEEEeC
Q 047260 725 PSYSTLLVVGGISSLELWNMAENKSMT-IAAHENIISALAQ--SPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 725 pdg~~L~s~s~dg~I~Iwdl~~~~~~~-~~~h~~~V~slaf--spdg~~LaSgs~DG~V~IWd 784 (784)
+..|++++ +++|++||+.+++... ..+|.+.|..++| +|++..|++++.||+ +||.
T Consensus 236 --g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 236 --DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp --TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred --CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 57888886 6999999999998854 4489999999999 999999999999999 9884
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.2e-28 Score=266.72 Aligned_cols=287 Identities=14% Similarity=0.208 Sum_probs=232.7
Q ss_pred CCCCCCcccccccccCC--CceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceE
Q 047260 434 SEGTGSLASASNLLEDI--DRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVT 511 (784)
Q Consensus 434 ~~~~~~~~ss~~~~~~~--~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~ 511 (784)
..++...+.++.+.++. ..++.+|+.|+.+++|+..... ......+.+|.+.|+
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~------------------------~~~~~~~~~h~~~v~ 90 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG------------------------QTIPKAQQMHTGPVL 90 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS------------------------CEEEEEEEECSSCEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC------------------------ceeEEEeccccCCEE
Confidence 34455567777887775 5777789999999999884421 112356778999999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEE--ccCCCEEEEEeCCCeEEEEcCCCCcceeeecc
Q 047260 512 CCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRF--RPNSSQLATASVDKSVRLWDAANPNFCSQAYT 589 (784)
Q Consensus 512 ~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~f--spdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~ 589 (784)
+++|+|++++|++++.||.|+|||+.+++.+. +..|...|++++| ++++.+|++++.||.|++||+++++ ....+.
T Consensus 91 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~ 168 (368)
T 3mmy_A 91 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN-PMMVLQ 168 (368)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS-CSEEEE
T ss_pred EEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc-EEEEEe
Confidence 99999999999999999999999999988776 4579999999999 8899999999999999999999876 445555
Q ss_pred CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee-----cCCeeEEEEecCCCE----EEEEECCCcEEEEE
Q 047260 590 GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT-----KGGTAQVRFQPRIGQ----LLAAASDKVVSIFD 660 (784)
Q Consensus 590 ~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~-----~~~v~~v~fsp~~~~----Ll~~s~Dg~I~IwD 660 (784)
.+ ..+.++.+.+. .+++++.++.+++|+++........ .....++.+.+.... +++++.|+.|++||
T Consensus 169 ~~-~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~ 244 (368)
T 3mmy_A 169 LP-ERCYCADVIYP---MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHY 244 (368)
T ss_dssp CS-SCEEEEEEETT---EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEE
T ss_pred cC-CCceEEEecCC---eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEe
Confidence 44 46777777754 6777888999999999865433222 245666777666554 99999999999999
Q ss_pred CCCC---eEEEEEeCCCC------------CEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEe
Q 047260 661 IETD---RQTHSLQGHAE------------LVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFH 724 (784)
Q Consensus 661 l~t~---~~i~~l~~h~~------------~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fs 724 (784)
++.. ..+..+..|.. .|.+++|+|++.+|++++.+ .|+|||+.+++++..+..|...|.+++|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 324 (368)
T 3mmy_A 245 INPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFN 324 (368)
T ss_dssp SSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEEC
T ss_pred cCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEEC
Confidence 9987 56777777766 79999999999999999855 99999999999999999999999999999
Q ss_pred cCCCEEEEEECCCeEE---EEECCCCceE
Q 047260 725 PSYSTLLVVGGISSLE---LWNMAENKSM 750 (784)
Q Consensus 725 pdg~~L~s~s~dg~I~---Iwdl~~~~~~ 750 (784)
|++.+|++++.|+..+ +|+......+
T Consensus 325 ~~g~~l~~~s~d~~~~~~~~~~~~~~~~i 353 (368)
T 3mmy_A 325 HNGNIFAYASSYDWSKGHEFYNPQKKNYI 353 (368)
T ss_dssp TTSSCEEEEECCCSTTCGGGCCTTSCCEE
T ss_pred CCCCeEEEEecccccccccccCCCcccee
Confidence 9999999999987544 4444444443
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=7.4e-29 Score=278.86 Aligned_cols=248 Identities=19% Similarity=0.364 Sum_probs=215.9
Q ss_pred EeEeecCCCceEEEEEcCC-CCEEEEEeCCCeEEEEECCC----------CceeeecCCCCCCeEEEEEccCCC-EEEEE
Q 047260 500 VGCIRSRNSKVTCCHFSSD-GKLLASSGHDRKVVLWNMDT----------LQTESTPEDHKSVVTDVRFRPNSS-QLATA 567 (784)
Q Consensus 500 i~~l~~H~~~V~~l~fspd-g~~Lasgs~Dg~I~IWd~~t----------~~~~~~l~~h~~~It~i~fspdg~-~Latg 567 (784)
+.....|.+.|++++|+|+ +.+||+++.||.|+|||+.+ ...+..+.+|...|++++|+|++. +|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3455679999999999997 77999999999999999986 677788889999999999999988 99999
Q ss_pred eCCCeEEEEcCCCCcc------eeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC---ee---EEeecCCe
Q 047260 568 SVDKSVRLWDAANPNF------CSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF---LC---THITKGGT 635 (784)
Q Consensus 568 s~Dg~I~IWdl~~~~~------~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~---~~---~~~~~~~v 635 (784)
+.||.|++||+..... ....+.+|...|.+++|+|++..+|++++.|+.|++||++.. .. +..+...+
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987432 134566899999999999987889999999999999999865 22 33456789
Q ss_pred eEEEEecCCC-EEEEEECCCcEEEEECCC-CeEEEEEeCCCCCEEEEEEcCCCC-EEEEEeC-CeEEEEeCCC-------
Q 047260 636 AQVRFQPRIG-QLLAAASDKVVSIFDIET-DRQTHSLQGHAELVNYICWDTNGD-YLASVSQ-NLVKVWSMAS------- 704 (784)
Q Consensus 636 ~~v~fsp~~~-~Ll~~s~Dg~I~IwDl~t-~~~i~~l~~h~~~V~sl~~spdg~-~Lasgsd-d~I~IwDl~t------- 704 (784)
.+++|+|++. .+++++.||.|++||+++ ..++..+..|...|.+++|+|++. +|++++. +.|+|||+..
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 9999999987 577889999999999998 567888999999999999999985 6777774 5999999987
Q ss_pred -------CceEEEeccCCCceEEEEEecCCC-EEEEEECCCeEEEEECCCC
Q 047260 705 -------GECIQELSSNGNQFHSCVFHPSYS-TLLVVGGISSLELWNMAEN 747 (784)
Q Consensus 705 -------~~~i~~l~~~~~~I~sl~fspdg~-~L~s~s~dg~I~Iwdl~~~ 747 (784)
...+..+.+|...|.+++|+|+++ +|++++.||.|+||++...
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 367788888999999999999999 8999999999999998754
No 112
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.2e-28 Score=263.18 Aligned_cols=292 Identities=18% Similarity=0.207 Sum_probs=214.4
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEE
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHF 515 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~f 515 (784)
++...+....+.++.. ++.+|+.|+.+++|+..... ..+..+..+.+|...|++++|
T Consensus 9 gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~----------------------~~~~~~~~~~~~~~~v~~~~~ 65 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDT----------------------SNWELSDSWRAHDSSIVAIDW 65 (351)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSS----------------------CCEEEEEEEECCSSCEEEEEE
T ss_pred ccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCC----------------------CcceecceeccCCCcEEEEEE
Confidence 3444566777767655 45578899999999874332 123456778899999999999
Q ss_pred cC--CCCEEEEEeCCCeEEEEECCCC---------ceeeecCCCCCCeEEEEEccC--CCEEEEEeCCCeEEEEcCCCCc
Q 047260 516 SS--DGKLLASSGHDRKVVLWNMDTL---------QTESTPEDHKSVVTDVRFRPN--SSQLATASVDKSVRLWDAANPN 582 (784)
Q Consensus 516 sp--dg~~Lasgs~Dg~I~IWd~~t~---------~~~~~l~~h~~~It~i~fspd--g~~Latgs~Dg~I~IWdl~~~~ 582 (784)
+| |+++|++|+.||.|+|||+.++ +.+..+..|...|++++|+|+ +.+|++++.||.|++||+++.+
T Consensus 66 ~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 66 ASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 99 6999999999999999999876 557788899999999999999 9999999999999999998765
Q ss_pred ceee------------eccCCCCCeEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCee--EEe---ecCCeeEEEEecC
Q 047260 583 FCSQ------------AYTGHSSPIMSLDFHPK--KTDLFCFCDNDNEIQYWSINPFLC--THI---TKGGTAQVRFQPR 643 (784)
Q Consensus 583 ~~~~------------~~~~h~~~V~sl~~sp~--~~~ll~sgs~dg~I~iwDl~~~~~--~~~---~~~~v~~v~fsp~ 643 (784)
.... ....|...+.+++|+|+ ...++++++.++.+.+|+...... +.. +...+.+++|+|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 146 DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPS 225 (351)
T ss_dssp CTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCC
T ss_pred HhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCC
Confidence 2211 11267889999999997 345888899999998888876553 333 3467999999999
Q ss_pred C----CEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe-----CCeEEEEeCCCCceEEEeccC
Q 047260 644 I----GQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS-----QNLVKVWSMASGECIQELSSN 714 (784)
Q Consensus 644 ~----~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs-----dd~I~IwDl~t~~~i~~l~~~ 714 (784)
+ ..|++++.||.|++||++.+........+...+....+.+....+..+. ...+.+|+....+++..+..|
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 305 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH 305 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc
Confidence 8 7899999999999999988765555444444455555555555444443 226677777778889999999
Q ss_pred CCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 715 GNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 715 ~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
...|.+++|+|++++|++++.||.|+|||+.+++..
T Consensus 306 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 306 NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 999999999999999999999999999999987644
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.4e-27 Score=262.65 Aligned_cols=273 Identities=11% Similarity=0.123 Sum_probs=222.3
Q ss_pred ceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEE-EEEeCCCe
Q 047260 452 RFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLL-ASSGHDRK 530 (784)
Q Consensus 452 ~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~L-asgs~Dg~ 530 (784)
.++.+++.|+.|++|+.... ..+..+..|. .+.+++|+|++++| ++++.|+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~--------------------------~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~ 55 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN--------------------------KVTATIPVGS-NPMGAVISPDGTKVYVANAHSND 55 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT--------------------------EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTE
T ss_pred EEEEEcCCCCEEEEEECCCC--------------------------eEEEEeecCC-CcceEEECCCCCEEEEECCCCCe
Confidence 45667889999999976322 2334455554 58999999999977 66778999
Q ss_pred EEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEe-CCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEE
Q 047260 531 VVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATAS-VDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFC 609 (784)
Q Consensus 531 I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs-~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~ 609 (784)
|++||+.+++.+..+..+. .|.+++|+|++++|++++ .|+.|++||+.+++ ....+.. ...+.+++|+|++..+++
T Consensus 56 i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 56 VSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT-VAGTVKT-GKSPLGLALSPDGKKLYV 132 (391)
T ss_dssp EEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEEC-SSSEEEEEECTTSSEEEE
T ss_pred EEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCe-EEEEEeC-CCCcceEEECCCCCEEEE
Confidence 9999999999988886555 999999999999886554 67999999999876 4444443 457899999999998888
Q ss_pred EEeCCCeEEEEeCCCCeeEEeec--CCeeEEEEecCCCEEEE-EECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCC
Q 047260 610 FCDNDNEIQYWSINPFLCTHITK--GGTAQVRFQPRIGQLLA-AASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNG 686 (784)
Q Consensus 610 sgs~dg~I~iwDl~~~~~~~~~~--~~v~~v~fsp~~~~Ll~-~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg 686 (784)
+++.++.|++||+++.+.+..+. ..+..++|+|+++.+++ ++.++.|++||+++++.+..+. +...+.+++|+|++
T Consensus 133 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g 211 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEG 211 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTS
T ss_pred EeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCC
Confidence 99999999999999887776654 56788999999998854 4568999999999998887776 56689999999999
Q ss_pred CEEEEEe----CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEE-EEECCCeEEEEECCCCceE-EecccC
Q 047260 687 DYLASVS----QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLL-VVGGISSLELWNMAENKSM-TIAAHE 756 (784)
Q Consensus 687 ~~Lasgs----dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~-s~s~dg~I~Iwdl~~~~~~-~~~~h~ 756 (784)
++|++++ ++.|++||+.+++++..+..+. .+.+++|+|++++|+ +++.|+.|++||+.+++.+ .+..|.
T Consensus 212 ~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~ 286 (391)
T 1l0q_A 212 TKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGK 286 (391)
T ss_dssp SEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred CEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCc
Confidence 9888876 3499999999999998887764 578999999999884 5577899999999998876 343443
No 114
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-29 Score=303.43 Aligned_cols=247 Identities=19% Similarity=0.288 Sum_probs=204.6
Q ss_pred eEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECC--CCceeeecCCCCCCeEEEEEccC--CCEEEEEeCCCeEEEE
Q 047260 501 GCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMD--TLQTESTPEDHKSVVTDVRFRPN--SSQLATASVDKSVRLW 576 (784)
Q Consensus 501 ~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~--t~~~~~~l~~h~~~It~i~fspd--g~~Latgs~Dg~I~IW 576 (784)
..+.+|.+.|++++|+|++++|++|+.||.|+|||+. +++.+..+.+|...|++++|+++ +++|++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4578999999999999999999999999999999998 56778888999999999999987 9999999999999999
Q ss_pred cCCCCcc-eeeeccCCCCCeEEEEEcCCC-CcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEECCC
Q 047260 577 DAANPNF-CSQAYTGHSSPIMSLDFHPKK-TDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAASDK 654 (784)
Q Consensus 577 dl~~~~~-~~~~~~~h~~~V~sl~~sp~~-~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~Dg 654 (784)
|+.++.. ....+.+|...|.+++|+|+. ..++++++.||.|++||++....
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~--------------------------- 135 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--------------------------- 135 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC---------------------------
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC---------------------------
Confidence 9987642 455667788889999998872 23666666666666666653211
Q ss_pred cEEEEECCCCeEEEEEeCCCCCEEEEEEcC-------------CCCEEEEEeCC-eEEEEeCCCC----ceEEEeccCCC
Q 047260 655 VVSIFDIETDRQTHSLQGHAELVNYICWDT-------------NGDYLASVSQN-LVKVWSMASG----ECIQELSSNGN 716 (784)
Q Consensus 655 ~I~IwDl~t~~~i~~l~~h~~~V~sl~~sp-------------dg~~Lasgsdd-~I~IwDl~t~----~~i~~l~~~~~ 716 (784)
.....+.+|...|.+++|+| ++.+|++++.+ .|++||++++ .++..+..|..
T Consensus 136 ----------~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~ 205 (753)
T 3jro_A 136 ----------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 205 (753)
T ss_dssp ----------CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred ----------cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC
Confidence 12234456888999999999 58888888855 9999999887 56678889999
Q ss_pred ceEEEEEecC---CCEEEEEECCCeEEEEECCCCc------eEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 717 QFHSCVFHPS---YSTLLVVGGISSLELWNMAENK------SMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 717 ~I~sl~fspd---g~~L~s~s~dg~I~Iwdl~~~~------~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.|.+++|+|+ +.+|++++.||.|++||+.++. ......|...|++++|+|++.+|++++.||.|+|||
T Consensus 206 ~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 206 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 9999999999 8999999999999999998873 224456889999999999999999999999999996
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.3e-27 Score=263.05 Aligned_cols=260 Identities=11% Similarity=0.110 Sum_probs=218.6
Q ss_pred CEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEE-EEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEE
Q 047260 520 KLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQL-ATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSL 598 (784)
Q Consensus 520 ~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~L-atgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl 598 (784)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++ +...+..+. .+.++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~-~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN-VIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE-EEEEEECSS-SEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCe-EEEEEECCC-Cccce
Confidence 467888999999999999999998887665 58999999999977 667789999999998876 444444443 89999
Q ss_pred EEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec--CCeeEEEEecCCCEEE-EEECCCcEEEEECCCCeEEEEEeCCCC
Q 047260 599 DFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK--GGTAQVRFQPRIGQLL-AAASDKVVSIFDIETDRQTHSLQGHAE 675 (784)
Q Consensus 599 ~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~--~~v~~v~fsp~~~~Ll-~~s~Dg~I~IwDl~t~~~i~~l~~h~~ 675 (784)
+|+|++..+++++..++.|++||+.+.+.+..+. ..+.+++|+|+++.++ +++.++.|++||+++++.+..+..+ .
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~ 158 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-R 158 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-S
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-C
Confidence 9999999888888888999999999887766554 5678999999999884 5556999999999999998888755 5
Q ss_pred CEEEEEEcCCCCEEE-EEeC-CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEE---CCCeEEEEECCCCceE
Q 047260 676 LVNYICWDTNGDYLA-SVSQ-NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVG---GISSLELWNMAENKSM 750 (784)
Q Consensus 676 ~V~sl~~spdg~~La-sgsd-d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s---~dg~I~Iwdl~~~~~~ 750 (784)
.+.+++|+|++++|+ +++. +.|++||+++++++..+.. ...+.+++|+|++++|++++ .++.|++||+.+++.+
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 579999999999885 4444 4999999999988877754 46789999999999999988 6899999999998877
Q ss_pred EecccCCceEEEEEeCCCCEE-EEEECCCcEEEeC
Q 047260 751 TIAAHENIISALAQSPVTGMV-ASASHDSSVKLWK 784 (784)
Q Consensus 751 ~~~~h~~~V~slafspdg~~L-aSgs~DG~V~IWd 784 (784)
........+.+++|+|++++| ++++.|+.|++||
T Consensus 238 ~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 238 ARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 544444568999999999977 6667899999996
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=4e-29 Score=277.93 Aligned_cols=262 Identities=15% Similarity=0.134 Sum_probs=175.4
Q ss_pred ecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee-----eecCCCCCCeEEEEEcc--------CCCEEEEEeCC
Q 047260 504 RSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTE-----STPEDHKSVVTDVRFRP--------NSSQLATASVD 570 (784)
Q Consensus 504 ~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~-----~~l~~h~~~It~i~fsp--------dg~~Latgs~D 570 (784)
..|...+....+++++.+||+|+.|++|+|||+.++... ..+.+|.+.|++|+|+| ++++||+|+.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 345555555666677889999999999999999887543 45789999999999998 78999999999
Q ss_pred CeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEE
Q 047260 571 KSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAA 650 (784)
Q Consensus 571 g~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~ 650 (784)
++|+|||+.+.. ....+.+|...|.+++|+|++..+|++++.|+.|++||+++............ ......+.
T Consensus 166 ~tv~~Wd~~~~~-~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~-----~~~~~~~s- 238 (393)
T 4gq1_A 166 CTLIIWRLTDEG-PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTEL-----VKNPWLLT- 238 (393)
T ss_dssp SEEEEEEEETTE-EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---------------CSCCCSEE-
T ss_pred CeEEEEECCCCc-eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCC-----cccceEEe-
Confidence 999999998766 45556678899999999999888999999999999999987655433221100 00000111
Q ss_pred ECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEc-CCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEE-------
Q 047260 651 ASDKVVSIFDIETDRQTHSLQGHAELVNYICWD-TNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSC------- 721 (784)
Q Consensus 651 s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~s-pdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl------- 721 (784)
++...........+|...|.++.|+ +++..|++++.+ .+++||+..++....+..+...+..+
T Consensus 239 --------~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~ 310 (393)
T 4gq1_A 239 --------LNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQ 310 (393)
T ss_dssp --------EESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEE
T ss_pred --------cccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccc
Confidence 1111111122334688899999987 799999999966 99999999887666665544333332
Q ss_pred -----------EEec--CCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCcE
Q 047260 722 -----------VFHP--SYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSSV 780 (784)
Q Consensus 722 -----------~fsp--dg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V 780 (784)
.|+| ++.++++++.||.|+|||+.++... ....|...|.+++|+|||++||++++||.+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 311 GISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp EECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE
T ss_pred cccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 3333 2335566777999999999988766 667899999999999999999999988753
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-28 Score=281.53 Aligned_cols=243 Identities=10% Similarity=0.093 Sum_probs=202.8
Q ss_pred cCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCC-----CeEEEEEccCCCEEEEEeCCCeEEEEcCC
Q 047260 505 SRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKS-----VVTDVRFRPNSSQLATASVDKSVRLWDAA 579 (784)
Q Consensus 505 ~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~-----~It~i~fspdg~~Latgs~Dg~I~IWdl~ 579 (784)
.|...|++|+|||||++||+++.||.|+|||.+. .+..+. |.. .|.+++|+|||++|++|+.||+|+|||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 4688999999999999999999999999999654 666676 665 59999999999999999999999999999
Q ss_pred CCcc------eeeec----cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee------E-EeecCCeeEEEEec
Q 047260 580 NPNF------CSQAY----TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC------T-HITKGGTAQVRFQP 642 (784)
Q Consensus 580 ~~~~------~~~~~----~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~------~-~~~~~~v~~v~fsp 642 (784)
++.. ....+ .+|...|.+++|+|++ +++++.|+.|++||+..... + ..+...|.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-
Confidence 8652 23444 6788999999999998 66788899999999987653 2 1344679999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEE--cCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceE
Q 047260 643 RIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICW--DTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFH 719 (784)
Q Consensus 643 ~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~--spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~ 719 (784)
+..|++++ ++.|++||+.+++......+|...|..+.| +|++..|++++++ + ++|...
T Consensus 236 -g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d---------------- 296 (588)
T 2j04_A 236 -DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED---------------- 296 (588)
T ss_dssp -TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS----------------
T ss_pred -CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec----------------
Confidence 57787776 699999999988875444479999999999 9999999999966 7 999977
Q ss_pred EEEEecCCCEEEEEECCCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEEC
Q 047260 720 SCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASH 776 (784)
Q Consensus 720 sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~ 776 (784)
.+.++|++..+++. |+++++|+...+....+ .+...|.+++|+|||..+|+++.
T Consensus 297 ~~~~spd~~l~a~~--d~~v~lW~~~g~~l~~~-~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 ELHVTADNIIAPYL--EKKFKKWSTIWNEFNNY-ETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SEEEECCCSSHHHH--HHHHHHTTTTTTSSSSS-CCEEEEEEEEECTTSSEEEEEEE
T ss_pred cEEECCCceEEEEc--CCEEEEEECCCCceeee-ccceEEEEEEECCCCCEEEEEEe
Confidence 25699998766664 89999999876664433 44777999999999999999874
No 118
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.2e-27 Score=255.19 Aligned_cols=244 Identities=18% Similarity=0.258 Sum_probs=200.5
Q ss_pred CCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcC
Q 047260 438 GSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSS 517 (784)
Q Consensus 438 ~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fsp 517 (784)
...+.+..+.++... +.+|+.|+.+++|+.... ....+..+.+|.+.|++++|++
T Consensus 11 ~~~v~~~~~s~~~~~-l~~~~~dg~i~iw~~~~~------------------------~~~~~~~~~~h~~~v~~~~~~~ 65 (379)
T 3jrp_A 11 NELIHDAVLDYYGKR-LATCSSDKTIKIFEVEGE------------------------THKLIDTLTGHEGPVWRVDWAH 65 (379)
T ss_dssp CCCEEEEEECSSSSE-EEEEETTSCEEEEEEETT------------------------EEEEEEEECCCSSCEEEEEECC
T ss_pred cccEEEEEEcCCCCE-EEEEECCCcEEEEecCCC------------------------cceeeeEecCCCCcEEEEEeCC
Confidence 344566667666554 557889999999987421 2345667889999999999998
Q ss_pred C--CCEEEEEeCCCeEEEEECCCCc--eeeecCCCCCCeEEEEEccC--CCEEEEEeCCCeEEEEcCCCCcc-eeeeccC
Q 047260 518 D--GKLLASSGHDRKVVLWNMDTLQ--TESTPEDHKSVVTDVRFRPN--SSQLATASVDKSVRLWDAANPNF-CSQAYTG 590 (784)
Q Consensus 518 d--g~~Lasgs~Dg~I~IWd~~t~~--~~~~l~~h~~~It~i~fspd--g~~Latgs~Dg~I~IWdl~~~~~-~~~~~~~ 590 (784)
+ +++|++|+.||.|+|||+.+++ .+..+..|...|++++|+|+ +.+|++++.|+.|++||+.+... ....+..
T Consensus 66 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 145 (379)
T 3jrp_A 66 PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 145 (379)
T ss_dssp GGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC
T ss_pred CCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC
Confidence 7 9999999999999999999887 77788889999999999998 99999999999999999988642 3445678
Q ss_pred CCCCeEEEEEcCC------------CCcEEEEEeCCCeEEEEeCCCCe----eEE---eecCCeeEEEEecC---CCEEE
Q 047260 591 HSSPIMSLDFHPK------------KTDLFCFCDNDNEIQYWSINPFL----CTH---ITKGGTAQVRFQPR---IGQLL 648 (784)
Q Consensus 591 h~~~V~sl~~sp~------------~~~ll~sgs~dg~I~iwDl~~~~----~~~---~~~~~v~~v~fsp~---~~~Ll 648 (784)
|...|.+++|+|. ...++++++.|+.|++||++... ... .+...+.+++|+|+ +.+|+
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~ 225 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLA 225 (379)
T ss_dssp CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEE
Confidence 9999999999995 34588899999999999997543 222 24577999999999 89999
Q ss_pred EEECCCcEEEEECCCCe---EEEEE--eCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCc
Q 047260 649 AAASDKVVSIFDIETDR---QTHSL--QGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGE 706 (784)
Q Consensus 649 ~~s~Dg~I~IwDl~t~~---~i~~l--~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~ 706 (784)
+++.||.|++||++++. ....+ ..|...|.+++|+|++.+|++++.+ .|+|||+....
T Consensus 226 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 226 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred EEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 99999999999999863 22222 3488899999999999999988755 99999998654
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.4e-26 Score=258.33 Aligned_cols=241 Identities=13% Similarity=0.083 Sum_probs=201.6
Q ss_pred eecCCCceEEEEEcCCCCEE-EEEeCCCeEEEEECC--CCceeeecC--CCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 503 IRSRNSKVTCCHFSSDGKLL-ASSGHDRKVVLWNMD--TLQTESTPE--DHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 503 l~~H~~~V~~l~fspdg~~L-asgs~Dg~I~IWd~~--t~~~~~~l~--~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
..+|.+.|++++|+|++++| ++|+.||.|+|||+. +++.+..+. .|...|++++|+|++++|++++.||.|++|+
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 45688899999999999996 899999999999999 888888776 5778999999999999999999999999999
Q ss_pred CCCCcc---eeeeccCCCCCeEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCeeEEe----ecCCeeEEEEecCCCEEE
Q 047260 578 AANPNF---CSQAYTGHSSPIMSLDFHPK--KTDLFCFCDNDNEIQYWSINPFLCTHI----TKGGTAQVRFQPRIGQLL 648 (784)
Q Consensus 578 l~~~~~---~~~~~~~h~~~V~sl~~sp~--~~~ll~sgs~dg~I~iwDl~~~~~~~~----~~~~v~~v~fsp~~~~Ll 648 (784)
+.+... ....+.+|...|.+++|+|+ +..+|++++.|+.|++||+++..++.. +...+.+++|+ ++.+|+
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 987653 22366789999999999998 234888999999999999998766544 44789999999 999999
Q ss_pred EEECCCcEEEEECCCCeEEEEEeC-------------------------CCCCEEEEEEcCCCCEEEEEe-C-CeEEEEe
Q 047260 649 AAASDKVVSIFDIETDRQTHSLQG-------------------------HAELVNYICWDTNGDYLASVS-Q-NLVKVWS 701 (784)
Q Consensus 649 ~~s~Dg~I~IwDl~t~~~i~~l~~-------------------------h~~~V~sl~~spdg~~Lasgs-d-d~I~IwD 701 (784)
+++.|+.|++||+++++.+..+.. ....|.+++|+|++++|++++ . +.|+|||
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 999999999999999998888763 245799999999999999987 4 4999999
Q ss_pred C--CCC---ceEEEeccCCCceEEEEEecCCCEEEEEEC-------CCeEEEEECCC
Q 047260 702 M--ASG---ECIQELSSNGNQFHSCVFHPSYSTLLVVGG-------ISSLELWNMAE 746 (784)
Q Consensus 702 l--~t~---~~i~~l~~~~~~I~sl~fspdg~~L~s~s~-------dg~I~Iwdl~~ 746 (784)
+ .++ +++..+..+ ..|.+++|+|++ .+++++. +..|.+|.+..
T Consensus 337 ~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp ECSSSTTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEET
T ss_pred eccCCCCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEc
Confidence 9 565 677778777 889999999954 4444433 34578887643
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.3e-25 Score=250.65 Aligned_cols=278 Identities=12% Similarity=0.129 Sum_probs=226.8
Q ss_pred ccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEE
Q 047260 443 ASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLL 522 (784)
Q Consensus 443 s~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~L 522 (784)
...+.+ ...++.+++.|+.+.+|+...+. .. .......+.+|.+.|.+++|+++++++
T Consensus 127 ~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~---~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 184 (433)
T 3bws_A 127 SVRFID-NTRLAIPLLEDEGMDVLDINSGQ---TV------------------RLSPPEKYKKKLGFVETISIPEHNELW 184 (433)
T ss_dssp CCEESS-SSEEEEEBTTSSSEEEEETTTCC---EE------------------EECCCHHHHTTCCEEEEEEEGGGTEEE
T ss_pred EEEEeC-CCeEEEEeCCCCeEEEEECCCCe---Ee------------------eecCcccccccCCceeEEEEcCCCEEE
Confidence 455555 66777778888899999764322 10 001112346799999999999999999
Q ss_pred EEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEe-CCCeEEEEcCCCCcceeeeccCCCCCeEEEEEc
Q 047260 523 ASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATAS-VDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFH 601 (784)
Q Consensus 523 asgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs-~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~s 601 (784)
++++.|+.|++||+++++.+..+..|...+.+++|+|+++++++++ .|+.|++||+++++ ....+.. ...+.+++|+
T Consensus 185 ~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~-~~~~~~~-~~~~~~~~~~ 262 (433)
T 3bws_A 185 VSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL-EIRKTDK-IGLPRGLLLS 262 (433)
T ss_dssp EEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-EEEECCC-CSEEEEEEEC
T ss_pred EEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-EEEEecC-CCCceEEEEc
Confidence 9999999999999999999999989999999999999999886554 79999999999866 4444444 4569999999
Q ss_pred CCCCcEEEEEe-------CCCeEEEEeCCCCeeEEee--cCCeeEEEEecCCCEEEEE-ECCCcEEEEECCCCeEEEEEe
Q 047260 602 PKKTDLFCFCD-------NDNEIQYWSINPFLCTHIT--KGGTAQVRFQPRIGQLLAA-ASDKVVSIFDIETDRQTHSLQ 671 (784)
Q Consensus 602 p~~~~ll~sgs-------~dg~I~iwDl~~~~~~~~~--~~~v~~v~fsp~~~~Ll~~-s~Dg~I~IwDl~t~~~i~~l~ 671 (784)
|++..+++++. .|+.|++||+++.+..... ...+..++|+|+++.++++ +.++.|++||+.+++.+..+.
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP 342 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec
Confidence 99986655553 5889999999987766554 4678889999999877655 669999999999998888776
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeC----------------CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEEC
Q 047260 672 GHAELVNYICWDTNGDYLASVSQ----------------NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGG 735 (784)
Q Consensus 672 ~h~~~V~sl~~spdg~~Lasgsd----------------d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~ 735 (784)
+...+.+++|+|++++|++++. +.|++||+.+++.+..+.. ...+.+++|+|++++|++++.
T Consensus 343 -~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 343 -VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp -CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEET
T ss_pred -CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEEC
Confidence 7788999999999998888774 3899999999999988876 467899999999999998885
Q ss_pred -CCeEEEEECCC
Q 047260 736 -ISSLELWNMAE 746 (784)
Q Consensus 736 -dg~I~Iwdl~~ 746 (784)
|+.|++|++..
T Consensus 421 ~d~~i~v~~~~~ 432 (433)
T 3bws_A 421 LDHQIRVYRRDG 432 (433)
T ss_dssp TTTEEEEEEETT
T ss_pred CCCeEEEEEecC
Confidence 99999999864
No 121
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=1.6e-25 Score=259.95 Aligned_cols=303 Identities=10% Similarity=0.072 Sum_probs=243.1
Q ss_pred ceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeE
Q 047260 452 RFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKV 531 (784)
Q Consensus 452 ~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I 531 (784)
+++.+++.|++|.+|+.... ..+.++..+.. +.+++|+|||++|++++.|+.|
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~--------------------------~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V 202 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSK--------------------------KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARI 202 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTC--------------------------CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEE
T ss_pred EEEEEEcCCCeEEEEECCCc--------------------------eEEEEEecCcc-cceEEECCCCCEEEEECCCCeE
Confidence 45667888999999965222 13344553333 8999999999999999999999
Q ss_pred EEEEC--CCCceeeecCCCCCCeEEEEEcc----CCCEEEEEeC-CCeEEEEcCCCCcceeeeccC----------CC-C
Q 047260 532 VLWNM--DTLQTESTPEDHKSVVTDVRFRP----NSSQLATASV-DKSVRLWDAANPNFCSQAYTG----------HS-S 593 (784)
Q Consensus 532 ~IWd~--~t~~~~~~l~~h~~~It~i~fsp----dg~~Latgs~-Dg~I~IWdl~~~~~~~~~~~~----------h~-~ 593 (784)
++||+ .+++.+..+. +...+..++|+| ++++|++++. +++|.|||..+.+ ++..+.. |. .
T Consensus 203 ~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~-~~~~i~~~g~~~~~~~~~~~~ 280 (543)
T 1nir_A 203 DMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE-PKQIVSTRGMTVDTQTYHPEP 280 (543)
T ss_dssp EEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-EEEEEECCEECSSSCCEESCC
T ss_pred EEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc-cceeecccCcccCccccccCC
Confidence 99999 8888888886 556789999999 9999999985 8999999998876 3444332 22 3
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE--e--ecCCeeEEEEecCCCEEEEEEC-CCcEEEEECCCCeEEE
Q 047260 594 PIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTH--I--TKGGTAQVRFQPRIGQLLAAAS-DKVVSIFDIETDRQTH 668 (784)
Q Consensus 594 ~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~--~--~~~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~ 668 (784)
.+.++.++|++..++++...++.|.+||+.+.+.+. . ....+..+.|+|+++++++++. ++.|.+||+.+++++.
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 789999999999899999999999999998754322 2 2345678999999999887775 8999999999999998
Q ss_pred EEeC----CCCCEEEEEEcCC-CCEEEEEe--CCeEEEEeCCC-------CceEEEeccCCCceEEEEEecCCCEEEEEE
Q 047260 669 SLQG----HAELVNYICWDTN-GDYLASVS--QNLVKVWSMAS-------GECIQELSSNGNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 669 ~l~~----h~~~V~sl~~spd-g~~Lasgs--dd~I~IwDl~t-------~~~i~~l~~~~~~I~sl~fspdg~~L~s~s 734 (784)
.+.. |.+....+ ++|+ +.+++++. +++|.|||+.+ ++++.++..+...+..++++|++++|++++
T Consensus 361 ~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 361 LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 8874 55444443 4676 66677764 45999999998 899999999988889999999999999987
Q ss_pred C-------CCeEEEEECCCCceE-Ee---------cccCCceEEEEEeCCCCEEEEEE-----CCCcEEEeC
Q 047260 735 G-------ISSLELWNMAENKSM-TI---------AAHENIISALAQSPVTGMVASAS-----HDSSVKLWK 784 (784)
Q Consensus 735 ~-------dg~I~Iwdl~~~~~~-~~---------~~h~~~V~slafspdg~~LaSgs-----~DG~V~IWd 784 (784)
. +++|.+||+.+++.. .. ..+...|..++|+|+|+.|+++. .|+.|.|||
T Consensus 440 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 440 TFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp TTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEE
T ss_pred CCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEE
Confidence 2 679999999988765 33 35678899999999999888763 379999997
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.8e-25 Score=240.52 Aligned_cols=285 Identities=10% Similarity=0.109 Sum_probs=192.6
Q ss_pred CCcceeEEeEeecCCCc----eEEEEEcCCCC---EEEEEeCCCeEEEEECCCC---ceeeecCCCCCCeEEEEEccCCC
Q 047260 493 KGFTFCEVGCIRSRNSK----VTCCHFSSDGK---LLASSGHDRKVVLWNMDTL---QTESTPEDHKSVVTDVRFRPNSS 562 (784)
Q Consensus 493 ~~~~~~~i~~l~~H~~~----V~~l~fspdg~---~Lasgs~Dg~I~IWd~~t~---~~~~~l~~h~~~It~i~fspdg~ 562 (784)
..-++..+..|+...+. |.++-|-..|- .+++++ ...|++|+..+. +.++++..|..+|..|.|.||..
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 99 (356)
T 2w18_A 21 NPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVY 99 (356)
T ss_dssp ---CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCC
T ss_pred CcceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCccc
Confidence 34456666666665443 45555544332 566666 567999999988 88899999988888888888543
Q ss_pred EEEEEeCC----CeEEEEcCCCC--c-ceeeeccCCCCCeEEEEEcCCCCcEEEEEe--CCCeEEEEeCCC-CeeE---E
Q 047260 563 QLATASVD----KSVRLWDAANP--N-FCSQAYTGHSSPIMSLDFHPKKTDLFCFCD--NDNEIQYWSINP-FLCT---H 629 (784)
Q Consensus 563 ~Latgs~D----g~I~IWdl~~~--~-~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs--~dg~I~iwDl~~-~~~~---~ 629 (784)
-|++..-. +.|+..-+... . .......+|...|..+ ++ ..++.++. .|+.|++|++.+ ++.+ .
T Consensus 100 ~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~-g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~ 175 (356)
T 2w18_A 100 NLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TK-RRLVSSSGTLSDQQVEVMTFAEDGGGKENQF 175 (356)
T ss_dssp SCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TT-TEEEEEESSSTTCEEEEEEECTTSCEEEEEE
T ss_pred ceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CC-CcEEEecccCCCCcEEEEEECCCCceeeeec
Confidence 33332110 11211111111 0 0111112333334333 33 33555533 478888888843 4443 3
Q ss_pred eecCCeeEEEEec---CCCEEEEEECCCcEEEEECCCCeEEEEEeCCCC---CEEEEEEcCCCCEEE------------E
Q 047260 630 ITKGGTAQVRFQP---RIGQLLAAASDKVVSIFDIETDRQTHSLQGHAE---LVNYICWDTNGDYLA------------S 691 (784)
Q Consensus 630 ~~~~~v~~v~fsp---~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~---~V~sl~~spdg~~La------------s 691 (784)
.+...+..++|++ ++..|++++.|++|+|||++++++++++.+|.. .+.+++|+|+|.+++ +
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC----------
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence 4557788899999 779999999999999999999999999987543 677889999999874 4
Q ss_pred EeCC-eEEEEeCCCCceEEEe-----ccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccCCceE-EEE
Q 047260 692 VSQN-LVKVWSMASGECIQEL-----SSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHENIIS-ALA 763 (784)
Q Consensus 692 gsdd-~I~IwDl~t~~~i~~l-----~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~-sla 763 (784)
++.+ +|++||..+++++..+ .+|...+.+..++ +..+++++.|++|+|||+.+++++ ++.+|...+. .++
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~va 333 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVK 333 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEE
T ss_pred cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 5555 9999999999988765 3555555444444 778999999999999999999988 6667877655 689
Q ss_pred EeCCCCEEEEEECCCcEEEeC
Q 047260 764 QSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 764 fspdg~~LaSgs~DG~V~IWd 784 (784)
|+||+++|++|+.|++|+|||
T Consensus 334 fSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 334 WSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp ECSSSSEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEEECCCcEEEec
Confidence 999999999999999999997
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=3.4e-26 Score=250.72 Aligned_cols=240 Identities=8% Similarity=0.078 Sum_probs=182.8
Q ss_pred EEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEe
Q 047260 533 LWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCD 612 (784)
Q Consensus 533 IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs 612 (784)
||++.+...+..+..|...|++++|+|++++|++|+.|+ ++|||+.+..... .. +...+..+++.+++..++++++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIM-SQ--EMRHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEE-EE--ECSCCCEEEECTTSSEEEEECS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceee-ee--ecCCeEEEEEcCCCCEEEEEEC
Confidence 566777777777789999999999999999999998775 7899988754222 22 2235788889888887778888
Q ss_pred CCCeEEEEeCCCCeeEEee--cCCeeEEEEecCCCEEEEEECCCcEEEEECCCC-eEEEEEeCCCCCEEEEEEcCCCCEE
Q 047260 613 NDNEIQYWSINPFLCTHIT--KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETD-RQTHSLQGHAELVNYICWDTNGDYL 689 (784)
Q Consensus 613 ~dg~I~iwDl~~~~~~~~~--~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~-~~i~~l~~h~~~V~sl~~spdg~~L 689 (784)
.|+.|++||+.+.+++..+ ...+.++.++++ .+++ +.|+.|++||+.+. +.+..+.. ....+++++ .++
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~--~~~~-~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~l 150 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSRE--FIVV-SYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLL 150 (355)
T ss_dssp STTEEEEEETTTTEEEEEEECSSCEEEEEECSS--EEEE-EETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEE
T ss_pred CccEEEEEECCCCcEEEEEECCCceEEEEEcCC--EEEE-EEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEE
Confidence 8999999999988776554 467888888875 3433 45889999999988 66665554 455566777 666
Q ss_pred EEE--e-CCeEEEEeCCCCc----------------eEEEeccCCCceEEEEEecCCCEEEEEECCCe-EEEEECCCCce
Q 047260 690 ASV--S-QNLVKVWSMASGE----------------CIQELSSNGNQFHSCVFHPSYSTLLVVGGISS-LELWNMAENKS 749 (784)
Q Consensus 690 asg--s-dd~I~IwDl~t~~----------------~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~-I~Iwdl~~~~~ 749 (784)
+.+ + ++.|++||+.++. ++..+.+|...|.+++|+|++.+|++++.|++ |+|||+.++++
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~ 230 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL 230 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 664 3 4599999999865 27888999999999999999999999999998 99999999988
Q ss_pred E-Eec-c-cCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 750 M-TIA-A-HENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 750 ~-~~~-~-h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+ .+. + |...|++++|+|++++|++++.|+.|+|||
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 7 444 4 999999999999999999999999999996
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.4e-26 Score=248.72 Aligned_cols=260 Identities=12% Similarity=0.070 Sum_probs=196.9
Q ss_pred CCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCC
Q 047260 450 IDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDR 529 (784)
Q Consensus 450 ~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg 529 (784)
...++.+|+.|++|++|+...+. . +..+. ...|.++.|+|+ +++++.|+
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~---~-----------------------~~~~~--~~~v~~~~~~~~---~~s~s~D~ 95 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSK---T-----------------------ITTIT--TPNPRTGGEHPA---IISRGPCN 95 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSS---C-----------------------EEEEE--EECCCTTCCCCS---EEEECSTT
T ss_pred CCCEEEEECCCCcEEEEECCCCc---E-----------------------EEEEe--cCCceeeeeCCc---eEEecCCC
Confidence 34566789999999999885433 1 11111 345777888887 99999999
Q ss_pred eEEEEECC---------CCceeeecC-CCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEE
Q 047260 530 KVVLWNMD---------TLQTESTPE-DHKSVVTDVRFRP--NSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMS 597 (784)
Q Consensus 530 ~I~IWd~~---------t~~~~~~l~-~h~~~It~i~fsp--dg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~s 597 (784)
+|++|+.. +++.+..+. .|...|.+++|+| ++++|++++.||+|++||+++++........|...|.+
T Consensus 96 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~ 175 (343)
T 3lrv_A 96 RLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSS 175 (343)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCE
T ss_pred eEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEE
Confidence 99999765 445344443 6778999999999 99999999999999999999877433223455668999
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEeCCCCeeE-E---e-ecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeC
Q 047260 598 LDFHPKKTDLFCFCDNDNEIQYWSINPFLCT-H---I-TKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQG 672 (784)
Q Consensus 598 l~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~-~---~-~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~ 672 (784)
++|+|++. ++++|+.||.|++||+++.... . . +...+.+++|+|++.+|++++ |+.|++||+++.+.+..+..
T Consensus 176 ~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~ 253 (343)
T 3lrv_A 176 GVLHKDSL-LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT 253 (343)
T ss_dssp EEECTTSC-EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC
T ss_pred EEECCCCC-EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc
Confidence 99999987 8889999999999999976644 2 2 457899999999999999999 55999999999876554443
Q ss_pred ---CCCCE--EEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEeccCCCceEEEEEec---CCCEEEEEECCCeEEEE
Q 047260 673 ---HAELV--NYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSSNGNQFHSCVFHP---SYSTLLVVGGISSLELW 742 (784)
Q Consensus 673 ---h~~~V--~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~~~~~I~sl~fsp---dg~~L~s~s~dg~I~Iw 742 (784)
|...+ .+++|+|+|++|++++. +.|+||++......... ..+..+.|.+ +...+++++.|+.+.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 254 YTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp CBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred cccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEE
Confidence 33344 36999999999999774 49999999766543333 4567788888 88899999999988887
Q ss_pred ECCC
Q 047260 743 NMAE 746 (784)
Q Consensus 743 dl~~ 746 (784)
-...
T Consensus 330 ~~~~ 333 (343)
T 3lrv_A 330 LKTN 333 (343)
T ss_dssp EECS
T ss_pred EecC
Confidence 5433
No 125
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.9e-26 Score=276.60 Aligned_cols=246 Identities=18% Similarity=0.256 Sum_probs=203.3
Q ss_pred CCCCcccccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEE
Q 047260 436 GTGSLASASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHF 515 (784)
Q Consensus 436 ~~~~~~ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~f 515 (784)
++...+.+..+.++...++ +|+.|+.|++|+.... ....+..+.+|.+.|++++|
T Consensus 7 gH~~~V~~l~~s~dg~~la-tg~~dg~I~vwd~~~~------------------------~~~~~~~l~~h~~~V~~l~~ 61 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLA-TCSSDKTIKIFEVEGE------------------------THKLIDTLTGHEGPVWRVDW 61 (753)
T ss_dssp -CCCCEEEECCCSSSCCEE-EEETTTEEEEEEEETT------------------------EEEEEEEECCCSSCEEEEEE
T ss_pred cCcceeEEEEECCCCCeEE-EEECCCcEEEEecCCC------------------------CCccceeccCCcCceEEEEe
Confidence 4445566777777766554 6889999999987421 23456778899999999999
Q ss_pred cCC--CCEEEEEeCCCeEEEEECCCCc--eeeecCCCCCCeEEEEEccC--CCEEEEEeCCCeEEEEcCCCCc-ceeeec
Q 047260 516 SSD--GKLLASSGHDRKVVLWNMDTLQ--TESTPEDHKSVVTDVRFRPN--SSQLATASVDKSVRLWDAANPN-FCSQAY 588 (784)
Q Consensus 516 spd--g~~Lasgs~Dg~I~IWd~~t~~--~~~~l~~h~~~It~i~fspd--g~~Latgs~Dg~I~IWdl~~~~-~~~~~~ 588 (784)
+++ +++|++|+.||.|+|||+.+++ .+..+..|...|++++|+|+ +.+|++|+.||.|++||+.+.. .....+
T Consensus 62 s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~ 141 (753)
T 3jro_A 62 AHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII 141 (753)
T ss_dssp CCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE
T ss_pred cCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe
Confidence 998 9999999999999999999886 77788899999999999998 9999999999999999998763 234456
Q ss_pred cCCCCCeEEEEEcCC------------CCcEEEEEeCCCeEEEEeCCCC----eeEE---eecCCeeEEEEecC---CCE
Q 047260 589 TGHSSPIMSLDFHPK------------KTDLFCFCDNDNEIQYWSINPF----LCTH---ITKGGTAQVRFQPR---IGQ 646 (784)
Q Consensus 589 ~~h~~~V~sl~~sp~------------~~~ll~sgs~dg~I~iwDl~~~----~~~~---~~~~~v~~v~fsp~---~~~ 646 (784)
.+|...|.+++|+|. +..++++|+.||.|++||++.. .... .+...+.+++|+|+ +..
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~ 221 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 221 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCE
Confidence 789999999999995 2447888999999999999865 3333 24577999999999 899
Q ss_pred EEEEECCCcEEEEECCCCe-----EEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCc
Q 047260 647 LLAAASDKVVSIFDIETDR-----QTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGE 706 (784)
Q Consensus 647 Ll~~s~Dg~I~IwDl~t~~-----~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~ 706 (784)
+++++.||.|++||++++. .+.....|...|.+++|+|++.+|++++.+ .|+|||+..+.
T Consensus 222 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 222 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 9999999999999998864 233334588899999999999999998855 99999998643
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1e-24 Score=244.49 Aligned_cols=263 Identities=12% Similarity=0.101 Sum_probs=213.5
Q ss_pred eEeecCCCceEEEEEcC--------------CCCEEEEEeCC------CeEEEEECCCCceeeecCCCCCCeEEEEEccC
Q 047260 501 GCIRSRNSKVTCCHFSS--------------DGKLLASSGHD------RKVVLWNMDTLQTESTPEDHKSVVTDVRFRPN 560 (784)
Q Consensus 501 ~~l~~H~~~V~~l~fsp--------------dg~~Lasgs~D------g~I~IWd~~t~~~~~~l~~h~~~It~i~fspd 560 (784)
..+.+|...|.++++++ .+..|+.++.+ +.|++||++. .....+..|...|.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 34667877787777764 25566666554 7999999984 456677789999999999999
Q ss_pred CCEEEEEeCCC---eEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCe--EEEEeCCCCeeEEee--cC
Q 047260 561 SSQLATASVDK---SVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNE--IQYWSINPFLCTHIT--KG 633 (784)
Q Consensus 561 g~~Latgs~Dg---~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~--I~iwDl~~~~~~~~~--~~ 633 (784)
+++|++++.|+ .|++||+.+++. ..+..|...+.+++|+|++..++++++.++. |++||+++.+..... ..
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~--~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAV--RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCE--EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcE--EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC
Confidence 99999999885 999999998763 3456778899999999999978778876654 999999877654433 35
Q ss_pred CeeEEEEecCCCEEEEEEC-CC--cEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC----CeEEEEeCCCCc
Q 047260 634 GTAQVRFQPRIGQLLAAAS-DK--VVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ----NLVKVWSMASGE 706 (784)
Q Consensus 634 ~v~~v~fsp~~~~Ll~~s~-Dg--~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd----d~I~IwDl~t~~ 706 (784)
.+.+++|+|++..|++++. ++ .|++||+.+++. ..+..+...+.+++|+|+|++|++++. ..|++||+.+++
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 6889999999999998886 44 688889988764 345557778999999999999988773 289999999987
Q ss_pred eEEEeccCCCceEEEEEecCCCEEEEEECCC---eEEEEECCCCceEEecccCCceEEEEEeCCCC
Q 047260 707 CIQELSSNGNQFHSCVFHPSYSTLLVVGGIS---SLELWNMAENKSMTIAAHENIISALAQSPVTG 769 (784)
Q Consensus 707 ~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg---~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~ 769 (784)
+. .+..+. .+.+++|+|++++|++++.++ .|++||+..+....+..|.+.|.+++|+|...
T Consensus 347 ~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 347 VQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCCC
T ss_pred EE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccccc
Confidence 74 455554 889999999999999988876 79999999888888999999999999999754
No 127
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=3.5e-26 Score=254.18 Aligned_cols=256 Identities=14% Similarity=0.129 Sum_probs=171.6
Q ss_pred cCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcC--------CC
Q 047260 448 EDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSS--------DG 519 (784)
Q Consensus 448 ~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fsp--------dg 519 (784)
+....++++++.|+++++|+..... ......+..+.+|.+.|++++|+| |+
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~---------------------~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~ 156 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNET---------------------IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE 156 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTE---------------------EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCc---------------------cceeeeecccCCCCCceEEEEEccccccccCCCC
Confidence 4455677889999999999875432 112234556789999999999998 88
Q ss_pred CEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCC-CEEEEEeCCCeEEEEcCCCCcceeeecc---CCCCCe
Q 047260 520 KLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNS-SQLATASVDKSVRLWDAANPNFCSQAYT---GHSSPI 595 (784)
Q Consensus 520 ~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg-~~Latgs~Dg~I~IWdl~~~~~~~~~~~---~h~~~V 595 (784)
++||+|+.|++|+|||+.++..+..+..|...|.+++|+|++ .+|++++.|++|++||+.++........ .+...+
T Consensus 157 ~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~ 236 (393)
T 4gq1_A 157 QVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWL 236 (393)
T ss_dssp EEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCS
T ss_pred CEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceE
Confidence 999999999999999999888888888999999999999977 4899999999999999988653221111 111122
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEe-cCCCEEEEEECCCcEEEEECCCCeEEEEEeCCC
Q 047260 596 MSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQ-PRIGQLLAAASDKVVSIFDIETDRQTHSLQGHA 674 (784)
Q Consensus 596 ~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fs-p~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~ 674 (784)
....+.+.... .....+...+.++.|. +++..+++++.|+.|++||+..++....+..|.
T Consensus 237 ~s~~~~~~~~~-------------------~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~ 297 (393)
T 4gq1_A 237 LTLNTLPLVNT-------------------CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDST 297 (393)
T ss_dssp EEEESGGGC-------------------------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------
T ss_pred Eecccccceee-------------------eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeec
Confidence 22222211110 0011233456666665 677777777777888888877766555555444
Q ss_pred CCEEEEE------------------EcC--CCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEE
Q 047260 675 ELVNYIC------------------WDT--NGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVV 733 (784)
Q Consensus 675 ~~V~sl~------------------~sp--dg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~ 733 (784)
..+..+. |++ ++.++++++++ .|+|||+.+++++..+..|...|.+++|+|+|++|+++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 298 MKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp ------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 4443332 332 33456667654 99999999999988888999999999999999999999
Q ss_pred ECCCeEEEEEC
Q 047260 734 GGISSLELWNM 744 (784)
Q Consensus 734 s~dg~I~Iwdl 744 (784)
+.+| +.+|.+
T Consensus 378 s~~G-v~lvrL 387 (393)
T 4gq1_A 378 TEGS-VLLTRL 387 (393)
T ss_dssp ESSE-EEEEEE
T ss_pred eCCC-eEEEEE
Confidence 8766 666654
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=2.3e-24 Score=241.60 Aligned_cols=271 Identities=13% Similarity=0.114 Sum_probs=216.4
Q ss_pred CceEEEEEcCCCC-EEEEEe----CCC----eEEEEEC--CCCcee--eecCCCCCCeEEEEEcc--------------C
Q 047260 508 SKVTCCHFSSDGK-LLASSG----HDR----KVVLWNM--DTLQTE--STPEDHKSVVTDVRFRP--------------N 560 (784)
Q Consensus 508 ~~V~~l~fspdg~-~Lasgs----~Dg----~I~IWd~--~t~~~~--~~l~~h~~~It~i~fsp--------------d 560 (784)
..|....|.+.|. ++++|+ .|| .|+|||+ .+++.+ ..+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4677888888775 666776 467 8999999 888877 45778888888887775 1
Q ss_pred CCEEEEEeCC------CeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCC---CeEEEEeCCCCeeEEe-
Q 047260 561 SSQLATASVD------KSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDND---NEIQYWSINPFLCTHI- 630 (784)
Q Consensus 561 g~~Latgs~D------g~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d---g~I~iwDl~~~~~~~~- 630 (784)
+..|+.++.+ +.|++||++.. ....+.+|...|.+++|+|++..+ ++++.+ ..|++||+++.++...
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~--~~~~l~~~~~~v~~~~~Spdg~~l-a~~s~~~~~~~i~~~d~~tg~~~~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY--NQFVVHRSPQPLMSPAWSPDGSKL-AYVTFESGRSALVIQTLANGAVRQVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC--SCEEEEEESSCEEEEEECTTSSEE-EEEECTTSSCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC--CCEEEeCCCCcceeeEEcCCCCEE-EEEEecCCCcEEEEEECCCCcEEEee
Confidence 5667666654 79999999853 355667788999999999999855 445545 4999999998766544
Q ss_pred -ecCCeeEEEEecCCCEEEE-EECCC--cEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC-C---eEEEEeC
Q 047260 631 -TKGGTAQVRFQPRIGQLLA-AASDK--VVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ-N---LVKVWSM 702 (784)
Q Consensus 631 -~~~~v~~v~fsp~~~~Ll~-~s~Dg--~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd-d---~I~IwDl 702 (784)
+...+.+++|+|+++.|+. ++.++ .|++||+++++. ..+..|...+.+++|+|||++|+++++ + .|++||+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 3467889999999998884 44454 499999998876 567778889999999999999888774 3 7888899
Q ss_pred CCCceEEEeccCCCceEEEEEecCCCEEEEEECC---CeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCC-
Q 047260 703 ASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGI---SSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDS- 778 (784)
Q Consensus 703 ~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~d---g~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG- 778 (784)
.+++. ..+..+...+.+++|+|++++|++++.+ ..|++||+.+++...+..|. .+.+++|+|++++|++++.|+
T Consensus 299 ~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 299 NGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp TSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETT
T ss_pred CCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCC
Confidence 88764 4455667788999999999999988875 58999999999887777665 899999999999999988877
Q ss_pred --cEEEeC
Q 047260 779 --SVKLWK 784 (784)
Q Consensus 779 --~V~IWd 784 (784)
.|++||
T Consensus 377 ~~~l~~~d 384 (415)
T 2hqs_A 377 GSVLNLVS 384 (415)
T ss_dssp EEEEEEEE
T ss_pred ccEEEEEE
Confidence 688885
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=1.8e-23 Score=225.11 Aligned_cols=184 Identities=11% Similarity=0.065 Sum_probs=143.2
Q ss_pred cCCCEEEEEe--CCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcC--CCCcEEEEEeCCCeEEEEeCCCCeeEEeecC-
Q 047260 559 PNSSQLATAS--VDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHP--KKTDLFCFCDNDNEIQYWSINPFLCTHITKG- 633 (784)
Q Consensus 559 pdg~~Latgs--~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp--~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~- 633 (784)
++++++.+++ .|+.|++|++.........+.+|...+..++|++ ....+|++++.|++|++||+++++++..+.+
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 3454444433 4888888888543335666678888899999988 2345999999999999999999998887753
Q ss_pred -----CeeEEEEecCCCEE------------EEEECCCcEEEEECCCCeEEEEE-----eCCCCCEEEEEEcCCCCEEEE
Q 047260 634 -----GTAQVRFQPRIGQL------------LAAASDKVVSIFDIETDRQTHSL-----QGHAELVNYICWDTNGDYLAS 691 (784)
Q Consensus 634 -----~v~~v~fsp~~~~L------------l~~s~Dg~I~IwDl~t~~~i~~l-----~~h~~~V~sl~~spdg~~Las 691 (784)
.+.+++|+|++..+ ++++.|++|++||..+++.+..+ .+|...+.+..++ +.++++
T Consensus 223 ~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lAS 300 (356)
T 2w18_A 223 DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAA 300 (356)
T ss_dssp C---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEE
T ss_pred CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEE
Confidence 45677899998876 44667999999999999887765 3566665555444 888999
Q ss_pred EeCC-eEEEEeCCCCceEEEeccCCCceE-EEEEecCCCEEEEEECCCeEEEEEC
Q 047260 692 VSQN-LVKVWSMASGECIQELSSNGNQFH-SCVFHPSYSTLLVVGGISSLELWNM 744 (784)
Q Consensus 692 gsdd-~I~IwDl~t~~~i~~l~~~~~~I~-sl~fspdg~~L~s~s~dg~I~Iwdl 744 (784)
++.| +|+|||+.+++++.++.+|...+. +++|+|++++|++|+.|++|+|||+
T Consensus 301 gS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 301 ILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9855 999999999999999998877655 5899999999999999999999995
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=2.9e-22 Score=216.29 Aligned_cols=268 Identities=10% Similarity=0.035 Sum_probs=217.1
Q ss_pred CCCceEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEE-eCCCeEEEEc
Q 047260 506 RNSKVTCCHFSSDGKLLASSGH-------DRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATA-SVDKSVRLWD 577 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~-------Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latg-s~Dg~I~IWd 577 (784)
....+..++|+|++++|++++. ++.|.+||..+++.+..+.. ...+..++|+|++++++++ ..++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3456889999999998888774 56899999999998888754 3457889999999966555 5579999999
Q ss_pred CCCCcceeeeccCCCC---------CeEEEEEcCCCCcEEEEE-eCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCC
Q 047260 578 AANPNFCSQAYTGHSS---------PIMSLDFHPKKTDLFCFC-DNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRI 644 (784)
Q Consensus 578 l~~~~~~~~~~~~h~~---------~V~sl~~sp~~~~ll~sg-s~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~ 644 (784)
+.+++. ...+..+.. .+.+++|+|++..+++++ ..++.|.+||+.+.+.+..+. ..+..++|+|++
T Consensus 118 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 118 AKTGEV-KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTTCCE-EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred CCCCee-EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 998773 333333222 278899999999777776 458899999999988877665 347889999999
Q ss_pred CEEEEEECCCcEEEEECCCCeEEEEEeC----CCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEeccCCCce
Q 047260 645 GQLLAAASDKVVSIFDIETDRQTHSLQG----HAELVNYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSSNGNQF 718 (784)
Q Consensus 645 ~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~----h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~~~~~I 718 (784)
+.+++++.++.|.+||+.+++.+..+.. +...+..++|+|+++++++++. +.|.+||+.+++.+..+.... .
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~ 274 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--S 274 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--C
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--C
Confidence 9999999999999999999998887764 4567889999999998777663 499999999999888887543 2
Q ss_pred EEEEEecCCCEEEEEE-CCCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECC
Q 047260 719 HSCVFHPSYSTLLVVG-GISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHD 777 (784)
Q Consensus 719 ~sl~fspdg~~L~s~s-~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~D 777 (784)
..++|+|++++++++. .++.|.+||+.+++.+........+.+++|+|++++|+++..+
T Consensus 275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 275 LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 5799999999777776 5789999999999888655556688999999999977776654
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=4.9e-23 Score=239.01 Aligned_cols=266 Identities=11% Similarity=0.090 Sum_probs=213.8
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcC--CCCcceeeeccCC
Q 047260 514 HFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDA--ANPNFCSQAYTGH 591 (784)
Q Consensus 514 ~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl--~~~~~~~~~~~~h 591 (784)
+|+|++.++++++.|++|.+||..+++++.++..+.. +.+++|+|++++|++++.|++|++||+ .+.+ +...+. +
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~-~~~~i~-~ 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-KVAEIK-I 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-EEEEEE-C
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCc-EEEEEe-c
Confidence 3788999999999999999999999999998874433 899999999999999999999999999 6655 444454 4
Q ss_pred CCCeEEEEEcC----CCCcEEEEEeCCCeEEEEeCCCCeeEEeecC--------------CeeEEEEecCCCEEEEEEC-
Q 047260 592 SSPIMSLDFHP----KKTDLFCFCDNDNEIQYWSINPFLCTHITKG--------------GTAQVRFQPRIGQLLAAAS- 652 (784)
Q Consensus 592 ~~~V~sl~~sp----~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~--------------~v~~v~fsp~~~~Ll~~s~- 652 (784)
...+..++|+| ++..+++++..++.|.+||..+.+++..+.. .+..+.++|++..+++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 55689999999 9987777776799999999998877765532 4678999998887766655
Q ss_pred CCcEEEEECCCCeEEE--EEeCCCCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCCCceEEEecc----CCCceEEEEEe
Q 047260 653 DKVVSIFDIETDRQTH--SLQGHAELVNYICWDTNGDYLASVS--QNLVKVWSMASGECIQELSS----NGNQFHSCVFH 724 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~--~l~~h~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t~~~i~~l~~----~~~~I~sl~fs 724 (784)
++.|.+||+.+.+.+. .+. +...+.++.|+|+|++|++++ +++|.+||+.+++++..+.. |......+ ++
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~ 378 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH 378 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE
T ss_pred CCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC
Confidence 7999999998865433 443 566788899999999877665 45999999999999988874 43333333 57
Q ss_pred cCC-CEEEEEE-CCCeEEEEECCC-------CceE-EecccCCceEEEEEeCCCCEEEEEE-------CCCcEEEeC
Q 047260 725 PSY-STLLVVG-GISSLELWNMAE-------NKSM-TIAAHENIISALAQSPVTGMVASAS-------HDSSVKLWK 784 (784)
Q Consensus 725 pdg-~~L~s~s-~dg~I~Iwdl~~-------~~~~-~~~~h~~~V~slafspdg~~LaSgs-------~DG~V~IWd 784 (784)
|++ ..++++. .|++|.+||+.+ .+++ ++..|...+..++|+|++++|++++ .+++|.|||
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEE
Confidence 874 4445544 578999999988 6666 6777888889999999999999987 277999997
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=5e-23 Score=246.59 Aligned_cols=274 Identities=12% Similarity=0.103 Sum_probs=214.8
Q ss_pred CCceEEEEEcCCCCEEEEEeC-CC-----eEEEEECCCCceeeecCCCCC------------------------CeEEEE
Q 047260 507 NSKVTCCHFSSDGKLLASSGH-DR-----KVVLWNMDTLQTESTPEDHKS------------------------VVTDVR 556 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~-Dg-----~I~IWd~~t~~~~~~l~~h~~------------------------~It~i~ 556 (784)
...|.+++|||||++|++++. |+ .|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456999999999999999998 88 899999999887766654433 388999
Q ss_pred EccCCCEEEEEeCCCeEEEEcCCCCc-ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCC-
Q 047260 557 FRPNSSQLATASVDKSVRLWDAANPN-FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGG- 634 (784)
Q Consensus 557 fspdg~~Latgs~Dg~I~IWdl~~~~-~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~- 634 (784)
|+|||++|++++. +.|++||+.++. .....+..|...+.+++|+|++..+++ ++ ++.|++||+.+..........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~-~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSF-IR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEE-EE-TTEEEEEETTTTEEEECCCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEE-Ee-CCcEEEEecCCCCEEEeccCCc
Confidence 9999999999986 999999998761 013345667788999999999985544 44 569999999987766554322
Q ss_pred ------------------eeEEEEecCCCEEEEEECCC---------------------------------cEEEEECCC
Q 047260 635 ------------------TAQVRFQPRIGQLLAAASDK---------------------------------VVSIFDIET 663 (784)
Q Consensus 635 ------------------v~~v~fsp~~~~Ll~~s~Dg---------------------------------~I~IwDl~t 663 (784)
+..+.|+|++++|++++.|+ .|.+||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 36799999999999988765 789999988
Q ss_pred -CeEEEEEe--CCCCCEEEEEEcCCCCEEEEEeC-----C-eEEEEeCCCCceEEEeccCCC----ceEEEEEecCCCEE
Q 047260 664 -DRQTHSLQ--GHAELVNYICWDTNGDYLASVSQ-----N-LVKVWSMASGECIQELSSNGN----QFHSCVFHPSYSTL 730 (784)
Q Consensus 664 -~~~i~~l~--~h~~~V~sl~~spdg~~Lasgsd-----d-~I~IwDl~t~~~i~~l~~~~~----~I~sl~fspdg~~L 730 (784)
++...... .|...+..++| |||++|++++. + .|++||+.++++...+..+.. .+..++|+|+++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 77654433 36778999999 99999887652 2 899999999988777665443 45688999999988
Q ss_pred EEEECCCeEEEEECC-CCceEEecccCCceEEE-EEeCCCCEEEEE-ECCC--cEEEeC
Q 047260 731 LVVGGISSLELWNMA-ENKSMTIAAHENIISAL-AQSPVTGMVASA-SHDS--SVKLWK 784 (784)
Q Consensus 731 ~s~s~dg~I~Iwdl~-~~~~~~~~~h~~~V~sl-afspdg~~LaSg-s~DG--~V~IWd 784 (784)
++++.+|.++||.+. ++....+..|...|..+ .|+|+++.|+.. +.|+ .++||+
T Consensus 352 ~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 352 WSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp EEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred EEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 888888877777654 23355677788888887 599999977654 4455 888884
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=3.3e-22 Score=214.55 Aligned_cols=268 Identities=13% Similarity=0.125 Sum_probs=202.3
Q ss_pred EEcCCCCE-EEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeC-CCeEEEEcCCCCcceeeeccCC
Q 047260 514 HFSSDGKL-LASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASV-DKSVRLWDAANPNFCSQAYTGH 591 (784)
Q Consensus 514 ~fspdg~~-Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~-Dg~I~IWdl~~~~~~~~~~~~h 591 (784)
.|.+++.+ +++++.++.|.+||+.+++.+..+..+...+ +++|+|++++|++++. ++.|.+||+.+++.....+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 45665554 6777889999999999999988887777777 9999999997777666 8999999999877425555566
Q ss_pred CCCeEEEEEcCCCCcEEEEEeCC-C--eEEEEeCCCCeeEEeec--CCeeEEEEecCCCEEEEEEC-CCc-EEEEECCCC
Q 047260 592 SSPIMSLDFHPKKTDLFCFCDND-N--EIQYWSINPFLCTHITK--GGTAQVRFQPRIGQLLAAAS-DKV-VSIFDIETD 664 (784)
Q Consensus 592 ~~~V~sl~~sp~~~~ll~sgs~d-g--~I~iwDl~~~~~~~~~~--~~v~~v~fsp~~~~Ll~~s~-Dg~-I~IwDl~t~ 664 (784)
..++.+++|+|++..++ ++..+ + .|.+||+.+.+.+..+. .....++|+|+++++++++. ++. |.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 66665699999998666 44444 3 99999999887766554 45689999999987776654 588 999998764
Q ss_pred eEE----EEEeCCCCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCCCce---EEEeccCCCceEEEEEecCCCEEEEEEC
Q 047260 665 RQT----HSLQGHAELVNYICWDTNGDYLASVS--QNLVKVWSMASGEC---IQELSSNGNQFHSCVFHPSYSTLLVVGG 735 (784)
Q Consensus 665 ~~i----~~l~~h~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t~~~---i~~l~~~~~~I~sl~fspdg~~L~s~s~ 735 (784)
..+ ............++|+|+|++++++. ++.|.+||+.+++. +..+..+ ..+..++|+|++++++++..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc
Confidence 332 12223455689999999999776655 34999999999988 7777654 66789999999998877664
Q ss_pred -CCeEEEEECCCCceEE---eccc----CC---ceEEEEEeCCCCEEEEEEC-CCcEEEeC
Q 047260 736 -ISSLELWNMAENKSMT---IAAH----EN---IISALAQSPVTGMVASASH-DSSVKLWK 784 (784)
Q Consensus 736 -dg~I~Iwdl~~~~~~~---~~~h----~~---~V~slafspdg~~LaSgs~-DG~V~IWd 784 (784)
++.|.+||+.+++... +..+ .. .+..++|+||+++|++++. ++.|.|||
T Consensus 241 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 241 STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 6789999999987731 1111 12 2356899999998876655 66999996
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=5.4e-22 Score=212.93 Aligned_cols=292 Identities=10% Similarity=0.081 Sum_probs=212.5
Q ss_pred cccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEEEE
Q 047260 446 LLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLASS 525 (784)
Q Consensus 446 ~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasg 525 (784)
|..+...++.+.+.++.|.+|+..... .+..+..+...+ +++|+|+|++|+++
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~--------------------------~~~~~~~~~~~~-~~~~s~dg~~l~~~ 57 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLE--------------------------ILNQITLGYDFV-DTAITSDCSNVVVT 57 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCC--------------------------EEEEEECCCCEE-EEEECSSSCEEEEE
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccc--------------------------eeeeEEccCCcc-eEEEcCCCCEEEEE
Confidence 345566666678888999999763322 122333455667 99999999977766
Q ss_pred eC-CCeEEEEECCCCce-eeecCCCCCCeEEEEEccCCCEEEEEeCCC---eEEEEcCCCCcceeeeccCCCCCeEEEEE
Q 047260 526 GH-DRKVVLWNMDTLQT-ESTPEDHKSVVTDVRFRPNSSQLATASVDK---SVRLWDAANPNFCSQAYTGHSSPIMSLDF 600 (784)
Q Consensus 526 s~-Dg~I~IWd~~t~~~-~~~l~~h~~~It~i~fspdg~~Latgs~Dg---~I~IWdl~~~~~~~~~~~~h~~~V~sl~~ 600 (784)
+. ++.|.+||+.+++. ...+..+..++.+++|+|++++|+++..++ .|.+||+.+++ ....+.. ...+.+++|
T Consensus 58 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-~~~~~~~-~~~~~~~~~ 135 (331)
T 3u4y_A 58 SDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-FISTIPI-PYDAVGIAI 135 (331)
T ss_dssp ESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE-EEEEEEC-CTTEEEEEE
T ss_pred eCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC-eEEEEEC-CCCccceEE
Confidence 65 88999999999887 777777776666699999999999555553 89999999876 3444433 345799999
Q ss_pred cCCCCcEEEEEeCCCe-EEEEeCCCCeeE-----E--eecCCeeEEEEecCCCEEEEEEC-CCcEEEEECCCCeE---EE
Q 047260 601 HPKKTDLFCFCDNDNE-IQYWSINPFLCT-----H--ITKGGTAQVRFQPRIGQLLAAAS-DKVVSIFDIETDRQ---TH 668 (784)
Q Consensus 601 sp~~~~ll~sgs~dg~-I~iwDl~~~~~~-----~--~~~~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~---i~ 668 (784)
+|++..+++++..++. |.+|+++....+ . ........++|+|+++++++++. ++.|.+||+.+++. +.
T Consensus 136 spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~ 215 (331)
T 3u4y_A 136 SPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLN 215 (331)
T ss_dssp CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEE
T ss_pred CCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceee
Confidence 9999988888888788 999998753221 1 11245788999999998877765 79999999998887 77
Q ss_pred EEeCCCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCce--EEEeccC----CCc---eEEEEEecCCCEEEEEECC-
Q 047260 669 SLQGHAELVNYICWDTNGDYLASVSQ--NLVKVWSMASGEC--IQELSSN----GNQ---FHSCVFHPSYSTLLVVGGI- 736 (784)
Q Consensus 669 ~l~~h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~--i~~l~~~----~~~---I~sl~fspdg~~L~s~s~d- 736 (784)
.+.. ...+..++|+|+|++|+++.. +.|.+||+.+++. +..+..+ ... ...++|+|++++|++++.+
T Consensus 216 ~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 216 AVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp EEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred eccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC
Confidence 7764 466788999999998877663 3899999999876 4444322 222 2458999999998777765
Q ss_pred CeEEEEECCCCceEEecccCCceEEEEEeCC
Q 047260 737 SSLELWNMAENKSMTIAAHENIISALAQSPV 767 (784)
Q Consensus 737 g~I~Iwdl~~~~~~~~~~h~~~V~slafspd 767 (784)
+.|.+||+.......+...+..-....++|+
T Consensus 295 ~~v~v~d~~~~~~~~~~~~~~~g~~~~~~~~ 325 (331)
T 3u4y_A 295 RELKVFTISGKVVGYVAGIEANGGIAICHPD 325 (331)
T ss_dssp TEEEEEETTSCEEEECTTCCCBSCEEECCCC
T ss_pred CcEEEEEecCCcccceecccccCCeEEECCc
Confidence 6999999988765554444333223334444
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=1.8e-22 Score=241.74 Aligned_cols=270 Identities=11% Similarity=0.116 Sum_probs=202.8
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--eeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCccee
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ--TESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCS 585 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~--~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~ 585 (784)
..|.+++|||||++|++++. +.|++||+.++. ....+..|...+.+++|+|||++|++++ ++.|++||+.++. ..
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~-~~ 185 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR-QM 185 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE-EE
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC-EE
Confidence 34889999999999999886 899999999873 4456677888999999999999999987 4699999998865 33
Q ss_pred eeccCCCCC----------------eEEEEEcCCCCcEEEEEeCCC--------------------------------eE
Q 047260 586 QAYTGHSSP----------------IMSLDFHPKKTDLFCFCDNDN--------------------------------EI 617 (784)
Q Consensus 586 ~~~~~h~~~----------------V~sl~~sp~~~~ll~sgs~dg--------------------------------~I 617 (784)
.....+... +.+++|+||+..++++...++ .|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 333333332 478999999997766554332 78
Q ss_pred EEEeCCC-CeeEEee-----cCCeeEEEEecCCCEEEEEEC-----CCcEEEEECCCCeEEEEEeCCCC----CEEEEEE
Q 047260 618 QYWSINP-FLCTHIT-----KGGTAQVRFQPRIGQLLAAAS-----DKVVSIFDIETDRQTHSLQGHAE----LVNYICW 682 (784)
Q Consensus 618 ~iwDl~~-~~~~~~~-----~~~v~~v~fsp~~~~Ll~~s~-----Dg~I~IwDl~t~~~i~~l~~h~~----~V~sl~~ 682 (784)
++||+.+ .+..... ...+..++| |+++.|++++. +..|++||+.+++....+..+.. .+.+++|
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 8999987 7655443 245678999 99999988764 56899999999987777665443 4568899
Q ss_pred cCCCCEEEEEeCC-eEEEEeCC-CCceEEEeccCCCceEEE-EEecCCCEEEEEECC-C--eEEEEECCC-CceE-Eecc
Q 047260 683 DTNGDYLASVSQN-LVKVWSMA-SGECIQELSSNGNQFHSC-VFHPSYSTLLVVGGI-S--SLELWNMAE-NKSM-TIAA 754 (784)
Q Consensus 683 spdg~~Lasgsdd-~I~IwDl~-t~~~i~~l~~~~~~I~sl-~fspdg~~L~s~s~d-g--~I~Iwdl~~-~~~~-~~~~ 754 (784)
+|||+++++++.+ .++||.+. ++. +..+..+...+..+ .|+|+++.|++.+.+ + .++||++.. +... .+..
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK 423 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc
Confidence 9999988887755 56666554 344 77888887888887 599999988766554 4 899998764 4433 4433
Q ss_pred cCCceEEEEEeCCCCEEEEEECC----CcEEEe
Q 047260 755 HENIISALAQSPVTGMVASASHD----SSVKLW 783 (784)
Q Consensus 755 h~~~V~slafspdg~~LaSgs~D----G~V~IW 783 (784)
...+..++|+||+++|+....+ ..+.+|
T Consensus 424 -~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~ 455 (741)
T 2ecf_A 424 -APGMHSASFARNASVYVDSWSNNSTPPQIELF 455 (741)
T ss_dssp -SCSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred -CCCceEEEECCCCCEEEEEecCCCCCCeEEEE
Confidence 6678899999999988776443 345554
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=2.9e-22 Score=214.78 Aligned_cols=262 Identities=12% Similarity=0.192 Sum_probs=191.9
Q ss_pred EEEEEeCCCeEEEEECC-CC--ceeeecCCCCCCeEEEEEccCCCEEEEEeCC-CeEEEEcCC--CCcc-eeeeccCCCC
Q 047260 521 LLASSGHDRKVVLWNMD-TL--QTESTPEDHKSVVTDVRFRPNSSQLATASVD-KSVRLWDAA--NPNF-CSQAYTGHSS 593 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~-t~--~~~~~l~~h~~~It~i~fspdg~~Latgs~D-g~I~IWdl~--~~~~-~~~~~~~h~~ 593 (784)
++++++.|+.|++||++ ++ +.+..+ .|...+.+++|+|++++|++++.+ +.|++|+++ ++.. ....+..+ .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~ 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-G 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-S
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-C
Confidence 34444789999999996 33 233333 577889999999999999998887 999999997 4442 22233333 3
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCeEEEEeC---CCCeeEEeec--CCeeEEEEecCCCEEEEEE-CCCcEEEEECCC-CeE
Q 047260 594 PIMSLDFHPKKTDLFCFCDNDNEIQYWSI---NPFLCTHITK--GGTAQVRFQPRIGQLLAAA-SDKVVSIFDIET-DRQ 666 (784)
Q Consensus 594 ~V~sl~~sp~~~~ll~sgs~dg~I~iwDl---~~~~~~~~~~--~~v~~v~fsp~~~~Ll~~s-~Dg~I~IwDl~t-~~~ 666 (784)
.+.+++|+|++..+++++..++.|.+||+ .......... ..+.+++|+|+++++++++ .++.|.+||+.+ ++.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 78999999999977777777999999999 3333443333 4578899999999999888 789999999987 544
Q ss_pred EE----EEeC-CCCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCC--Cce--EEEec---cC---CCceEEEEEecCCCE
Q 047260 667 TH----SLQG-HAELVNYICWDTNGDYLASVS--QNLVKVWSMAS--GEC--IQELS---SN---GNQFHSCVFHPSYST 729 (784)
Q Consensus 667 i~----~l~~-h~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t--~~~--i~~l~---~~---~~~I~sl~fspdg~~ 729 (784)
.. .+.. ....+.+++|+|++++|++++ ++.|.+||+.. ++. +..+. .. ...+..++|+|++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 32 2232 345788999999999776665 44999999953 432 33332 11 235668999999998
Q ss_pred EEEEE-CCCeEEEEECC--CCc--eEEecccCCceEEEEEeCCCCEEEEEE-CCCcEEEeC
Q 047260 730 LLVVG-GISSLELWNMA--ENK--SMTIAAHENIISALAQSPVTGMVASAS-HDSSVKLWK 784 (784)
Q Consensus 730 L~s~s-~dg~I~Iwdl~--~~~--~~~~~~h~~~V~slafspdg~~LaSgs-~DG~V~IWd 784 (784)
|+++. .++.|.+||+. ++. .+........+.+++|+|++++|++++ .|+.|.||+
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEE
Confidence 88665 68899999998 332 222222233489999999999888887 689999994
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=2.4e-22 Score=209.57 Aligned_cols=251 Identities=12% Similarity=0.093 Sum_probs=194.5
Q ss_pred EeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCC-CcceeeeccCC-CCCeEEEEEcC
Q 047260 525 SGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAAN-PNFCSQAYTGH-SSPIMSLDFHP 602 (784)
Q Consensus 525 gs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~-~~~~~~~~~~h-~~~V~sl~~sp 602 (784)
++.|+.|++||+.+++... +..|...|.+++|+|++++|++++ ++.|++||+.+ ++ .......+ ...|.+++|+|
T Consensus 18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS-PEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS-CEECCCTTCCCBCSCCEECT
T ss_pred CCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC-ceEeccccccccccceEECC
Confidence 4678999999999887664 446889999999999999999987 78999999998 65 44444444 46789999999
Q ss_pred CCCcEEEEEe-C--CCeEEEEeCCCCeeEEee-cCCeeEEEEecCCCEEE-EEECCCcEEEEECCC-CeEEEEEeCCCCC
Q 047260 603 KKTDLFCFCD-N--DNEIQYWSINPFLCTHIT-KGGTAQVRFQPRIGQLL-AAASDKVVSIFDIET-DRQTHSLQGHAEL 676 (784)
Q Consensus 603 ~~~~ll~sgs-~--dg~I~iwDl~~~~~~~~~-~~~v~~v~fsp~~~~Ll-~~s~Dg~I~IwDl~t-~~~i~~l~~h~~~ 676 (784)
++..+++++. . ...|..|++......... ...+..++|+|++..|+ ++..++.+.||+++. ......+..+...
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR 174 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence 9985555442 2 345555565554433222 24578889999999887 566789999998642 2344566678889
Q ss_pred EEEEEEcCCCCEEEEEe--CCeEEEEeCC-CCceEEEeccCCCceEEEEEecCCCEEEEEECC-----------CeEEEE
Q 047260 677 VNYICWDTNGDYLASVS--QNLVKVWSMA-SGECIQELSSNGNQFHSCVFHPSYSTLLVVGGI-----------SSLELW 742 (784)
Q Consensus 677 V~sl~~spdg~~Lasgs--dd~I~IwDl~-t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~d-----------g~I~Iw 742 (784)
+.+++|+|++++|+.++ ++.++||++. .+..+..+..+...+.++.|+|++++|++++.+ +.|++|
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 99999999999888766 3488888876 556677888887889999999999999988876 569999
Q ss_pred ECCCCceE---EecccCCceEEEEEeCCCCEEEEEECCC
Q 047260 743 NMAENKSM---TIAAHENIISALAQSPVTGMVASASHDS 778 (784)
Q Consensus 743 dl~~~~~~---~~~~h~~~V~slafspdg~~LaSgs~DG 778 (784)
|+.+++.. .+..|...|.+++|+|++++|++++.|.
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 255 DMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99988754 3447888999999999999988887654
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=2.1e-21 Score=208.03 Aligned_cols=290 Identities=10% Similarity=0.059 Sum_probs=203.7
Q ss_pred eEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEEEEeCC-CeE
Q 047260 453 FADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHD-RKV 531 (784)
Q Consensus 453 ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~D-g~I 531 (784)
++.+++.|+.+.+|+....+ .+..+.. ..|...+.+++|+|+|++|++++.+ +.|
T Consensus 7 l~~~~~~~~~v~~~~~~~~~-----------------------~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v 62 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEG-----------------------ALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRV 62 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTS-----------------------CEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEE
T ss_pred EEEeCCCCCeEEEEEECCCC-----------------------cEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeE
Confidence 34445778999999774321 0112222 2367789999999999999888876 999
Q ss_pred EEEECC--CCc--eeeecCCCCCCeEEEEEccCCCEEEEEeC-CCeEEEEcCCCCc--ceeeeccCCCCCeEEEEEcCCC
Q 047260 532 VLWNMD--TLQ--TESTPEDHKSVVTDVRFRPNSSQLATASV-DKSVRLWDAANPN--FCSQAYTGHSSPIMSLDFHPKK 604 (784)
Q Consensus 532 ~IWd~~--t~~--~~~~l~~h~~~It~i~fspdg~~Latgs~-Dg~I~IWdl~~~~--~~~~~~~~h~~~V~sl~~sp~~ 604 (784)
.+|+++ +++ .+..+..+. .+.+++|+|++++|++++. ++.|.+||+.++. .....+. ....+.+++|+|++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg 140 (343)
T 1ri6_A 63 LAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDN 140 (343)
T ss_dssp EEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTS
T ss_pred EEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCC
Confidence 999997 444 334444433 7899999999998877765 8899999995222 1233333 33468999999999
Q ss_pred CcEEEEEeCCCeEEEEeCCC-CeeEEe----e----cCCeeEEEEecCCCEEEEEE-CCCcEEEEECCC--CeE--EEEE
Q 047260 605 TDLFCFCDNDNEIQYWSINP-FLCTHI----T----KGGTAQVRFQPRIGQLLAAA-SDKVVSIFDIET--DRQ--THSL 670 (784)
Q Consensus 605 ~~ll~sgs~dg~I~iwDl~~-~~~~~~----~----~~~v~~v~fsp~~~~Ll~~s-~Dg~I~IwDl~t--~~~--i~~l 670 (784)
..+++++..++.|++||+.+ .+.... . ...+..++|+|++.++++++ .++.|.+||+.. ++. ...+
T Consensus 141 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~ 220 (343)
T 1ri6_A 141 RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL 220 (343)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEE
T ss_pred CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeec
Confidence 87777665899999999986 443211 1 13677899999999887776 689999999953 332 2333
Q ss_pred eC---C---CCCEEEEEEcCCCCEEEEEe--CCeEEEEeCC--C--CceEEEeccCCCceEEEEEecCCCEEEEEE-CCC
Q 047260 671 QG---H---AELVNYICWDTNGDYLASVS--QNLVKVWSMA--S--GECIQELSSNGNQFHSCVFHPSYSTLLVVG-GIS 737 (784)
Q Consensus 671 ~~---h---~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~--t--~~~i~~l~~~~~~I~sl~fspdg~~L~s~s-~dg 737 (784)
.. . ...+..++|+|+|++|+++. ++.|.+||+. + .+.+..+..+.. +..++|+|++++|++++ .++
T Consensus 221 ~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~ 299 (343)
T 1ri6_A 221 DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSH 299 (343)
T ss_dssp ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTC
T ss_pred cccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCC
Confidence 21 1 23677899999999887555 4499999998 3 345555555544 88999999999998888 578
Q ss_pred eEEEEEC--CCCceEEe--cccCCceEEEEEeCCCC
Q 047260 738 SLELWNM--AENKSMTI--AAHENIISALAQSPVTG 769 (784)
Q Consensus 738 ~I~Iwdl--~~~~~~~~--~~h~~~V~slafspdg~ 769 (784)
.|.+|++ .+++...+ ........+++|.++.+
T Consensus 300 ~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 300 HISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred eEEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence 9999954 45543322 22234567788887654
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=1.2e-21 Score=209.51 Aligned_cols=260 Identities=8% Similarity=0.064 Sum_probs=201.9
Q ss_pred CEEEEEeCCCeEEEEECCCCceeeecCCCCC--CeEEEEEccCCCEEE-EEeCCCeEEEEcCCCCcceeeeccCC----C
Q 047260 520 KLLASSGHDRKVVLWNMDTLQTESTPEDHKS--VVTDVRFRPNSSQLA-TASVDKSVRLWDAANPNFCSQAYTGH----S 592 (784)
Q Consensus 520 ~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~--~It~i~fspdg~~La-tgs~Dg~I~IWdl~~~~~~~~~~~~h----~ 592 (784)
++|++++.++.|.+||+.+++.+..+..... .+.+++|+|++++++ +++.++.|.+||+.+++.......++ .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999988887753322 588999999998765 55567899999998876433222222 1
Q ss_pred CCeEEEEEcCCCCcEEEEEe-----------CCCeEEEEeCCCCeeEEeec--CCeeEEEEecCCCEEEEEECCCcEEEE
Q 047260 593 SPIMSLDFHPKKTDLFCFCD-----------NDNEIQYWSINPFLCTHITK--GGTAQVRFQPRIGQLLAAASDKVVSIF 659 (784)
Q Consensus 593 ~~V~sl~~sp~~~~ll~sgs-----------~dg~I~iwDl~~~~~~~~~~--~~v~~v~fsp~~~~Ll~~s~Dg~I~Iw 659 (784)
..+.+++|+|++..++++.. .++.|.+||+.+.+.+..+. ..+..++|+|++++++++ ++.|.+|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 25778999999986665542 47999999999877765544 457789999999988888 6899999
Q ss_pred ECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-------------------------eEEEEeCCCCceE-EEecc
Q 047260 660 DIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-------------------------LVKVWSMASGECI-QELSS 713 (784)
Q Consensus 660 Dl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-------------------------~I~IwDl~t~~~i-~~l~~ 713 (784)
|+.+++.+..+..+... ..+.|+|++.+|+....+ .|.+||+.+++.. ..+..
T Consensus 160 d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 238 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238 (337)
T ss_dssp ETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred ECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC
Confidence 99999988877654311 123789998876655422 3689999998764 23345
Q ss_pred CCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 714 NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 714 ~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+...+.+++|+|++++++++ ++.|.+||+.+++..........+.+++|+|++++|++++.|+.|++||
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 55678899999999998888 6899999999988775555556789999999999999999999999996
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=1.7e-22 Score=241.10 Aligned_cols=273 Identities=12% Similarity=0.145 Sum_probs=207.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCC---CeEEEEEccCCCEEEEEeCC---------CeEEEE
Q 047260 509 KVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKS---VVTDVRFRPNSSQLATASVD---------KSVRLW 576 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~---~It~i~fspdg~~Latgs~D---------g~I~IW 576 (784)
.+.+++|+|||+++++ +.||.|++||+.+++....+..|.. .|.+++|+|||++|++++.+ +.|.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678899999998776 7899999999999988888877765 49999999999999999875 788899
Q ss_pred cCCCCcce-eeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecC---C------------------
Q 047260 577 DAANPNFC-SQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKG---G------------------ 634 (784)
Q Consensus 577 dl~~~~~~-~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~---~------------------ 634 (784)
|+.+++.. +....+|...+.+++|+|++..++++. ++.|++||+.+......... .
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF--ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE--TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEE--CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 99987631 222234555689999999998665544 37999999988766554432 2
Q ss_pred eeEEEEecCCCEEEEEECCC----------------------------------cEEEEECCCCeEEEEEeCC------C
Q 047260 635 TAQVRFQPRIGQLLAAASDK----------------------------------VVSIFDIETDRQTHSLQGH------A 674 (784)
Q Consensus 635 v~~v~fsp~~~~Ll~~s~Dg----------------------------------~I~IwDl~t~~~i~~l~~h------~ 674 (784)
+..+.|+|+++.|++++.++ .|++||+.+++....+..+ .
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 26899999999999887543 7999999988765666654 5
Q ss_pred CCEEEEEEcCCCCEEEEEeC-----CeEEEEeCCCCceEEEecc-CCCce----EEEEEecCCCEEEEE--ECCC-----
Q 047260 675 ELVNYICWDTNGDYLASVSQ-----NLVKVWSMASGECIQELSS-NGNQF----HSCVFHPSYSTLLVV--GGIS----- 737 (784)
Q Consensus 675 ~~V~sl~~spdg~~Lasgsd-----d~I~IwDl~t~~~i~~l~~-~~~~I----~sl~fspdg~~L~s~--s~dg----- 737 (784)
..+..++|+|||++|++..+ ..|++||+.++++...+.. +...+ ..++|+|+|+.|+.. ..++
T Consensus 255 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 255 YYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCE
T ss_pred ceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcce
Confidence 67899999999999877642 2799999999987766543 33333 378999999987764 4556
Q ss_pred -eEEEEE-CCCCc---eEEecccCCceEE-EEEeCCCCEEEEEECC---CcEEEeC
Q 047260 738 -SLELWN-MAENK---SMTIAAHENIISA-LAQSPVTGMVASASHD---SSVKLWK 784 (784)
Q Consensus 738 -~I~Iwd-l~~~~---~~~~~~h~~~V~s-lafspdg~~LaSgs~D---G~V~IWd 784 (784)
.|.+|| ..++. ...+..+...+.. ++|+||++.|+..+.+ +.++||+
T Consensus 335 ~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 335 YHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp EEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred eEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 577788 45555 4455444444554 6999999999877665 7888884
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=7.9e-22 Score=205.65 Aligned_cols=232 Identities=13% Similarity=0.137 Sum_probs=183.3
Q ss_pred EeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCC-CceeeecCCC-CCCeEEEEEccCCCEEEEEe--CCCeEEEEc
Q 047260 502 CIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDT-LQTESTPEDH-KSVVTDVRFRPNSSQLATAS--VDKSVRLWD 577 (784)
Q Consensus 502 ~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t-~~~~~~l~~h-~~~It~i~fspdg~~Latgs--~Dg~I~IWd 577 (784)
.+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++.......| ...|.+++|+|++++|++++ .++.+.||.
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 4456889999999999999999876 88999999999 8877777666 47889999999999999998 334555555
Q ss_pred C--CCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCC--CCeeEEe--ecCCeeEEEEecCCCEEEEEE
Q 047260 578 A--ANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSIN--PFLCTHI--TKGGTAQVRFQPRIGQLLAAA 651 (784)
Q Consensus 578 l--~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~--~~~~~~~--~~~~v~~v~fsp~~~~Ll~~s 651 (784)
+ .++. ...+..+ ..+.+++|+|++..+++++..++.+++|+++ +...... ....+.++.|+|++..+++++
T Consensus 115 ~~~~~~~--~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 115 LPSTGGT--PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EETTCCC--CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred EECCCCc--eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 4 4433 3333333 3489999999999888788889999999853 3333322 336788999999999888877
Q ss_pred C-CCcEEEEECC-CCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC------------CeEEEEeCCCCce--EEEeccCC
Q 047260 652 S-DKVVSIFDIE-TDRQTHSLQGHAELVNYICWDTNGDYLASVSQ------------NLVKVWSMASGEC--IQELSSNG 715 (784)
Q Consensus 652 ~-Dg~I~IwDl~-t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd------------d~I~IwDl~t~~~--i~~l~~~~ 715 (784)
. ++.+.+|++. .+..+..+..|...+.+++|+|+|++|++++. ..|++||+.+++. +..+..+.
T Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 271 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ 271 (297)
T ss_dssp CTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST
T ss_pred cCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC
Confidence 5 8999999986 45666777778888999999999999887763 3699999998865 44455777
Q ss_pred CceEEEEEecCCCEEEEEECCC
Q 047260 716 NQFHSCVFHPSYSTLLVVGGIS 737 (784)
Q Consensus 716 ~~I~sl~fspdg~~L~s~s~dg 737 (784)
..+.+++|+|++++|++++.+.
T Consensus 272 ~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 272 GTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTSCSCCBCTTSSEEEEEEECC
T ss_pred cccccceECCCCCEEEEEEecc
Confidence 8899999999999998887764
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=8.2e-22 Score=229.88 Aligned_cols=267 Identities=10% Similarity=0.026 Sum_probs=207.1
Q ss_pred CCceEEEEEcCCCCEEEEEeC-CCeEEEEECCCCceeeecCCCC-CCeEEEEEccCCCEEEEEeC---CCeEEEEcCCC-
Q 047260 507 NSKVTCCHFSSDGKLLASSGH-DRKVVLWNMDTLQTESTPEDHK-SVVTDVRFRPNSSQLATASV---DKSVRLWDAAN- 580 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~-Dg~I~IWd~~t~~~~~~l~~h~-~~It~i~fspdg~~Latgs~---Dg~I~IWdl~~- 580 (784)
..+|++++|+|||++||+++. ||++.||++++++... +..|. ..|..++|+|| +++++++. +...+||.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 557999999999999999887 9999999997666544 44454 68999999999 77777765 45566655433
Q ss_pred -CcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEECC----Cc
Q 047260 581 -PNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAASD----KV 655 (784)
Q Consensus 581 -~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~D----g~ 655 (784)
..... .+... ..+...+|+|+++.+++++..++.+.+||+.+++..........+++|+|+|+.|++++.+ +.
T Consensus 99 ~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 99 RPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp STTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEE
T ss_pred CCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeE
Confidence 22122 22222 2345678999988766666666666799999887766655444889999999999988876 78
Q ss_pred EEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe-CC--eEEEEeCCCCceEEEeccCCCceEEEE--------Ee
Q 047260 656 VSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS-QN--LVKVWSMASGECIQELSSNGNQFHSCV--------FH 724 (784)
Q Consensus 656 I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs-dd--~I~IwDl~t~~~i~~l~~~~~~I~sl~--------fs 724 (784)
|++||+.+++.. .+..|...+..++|+|||++|+++. ++ .|++||+.+++.. .+..+...+..++ |+
T Consensus 177 i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s 254 (582)
T 3o4h_A 177 LFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYL 254 (582)
T ss_dssp EEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEEC
T ss_pred EEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEc
Confidence 999999988754 6677888999999999999999665 34 7999999999887 7777777777777 99
Q ss_pred cCCCEEEEEECCCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCc---EEEeC
Q 047260 725 PSYSTLLVVGGISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSS---VKLWK 784 (784)
Q Consensus 725 pdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~---V~IWd 784 (784)
||+..+++++.++.+++|++ ++... .+.+.|.+++|+ +++++++++.+.. |.+||
T Consensus 255 pdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 255 PDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp TTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred CCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 99988888999999999999 55443 345779999999 9999998887744 55554
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=2.8e-21 Score=241.25 Aligned_cols=276 Identities=9% Similarity=0.031 Sum_probs=215.5
Q ss_pred EeEeecCCCce-------EEEEEcCCCCEEEEEeCC------CeEEEEECCCCceee-----------------------
Q 047260 500 VGCIRSRNSKV-------TCCHFSSDGKLLASSGHD------RKVVLWNMDTLQTES----------------------- 543 (784)
Q Consensus 500 i~~l~~H~~~V-------~~l~fspdg~~Lasgs~D------g~I~IWd~~t~~~~~----------------------- 543 (784)
...+..|...+ .+++|+|||+++++++.+ ..|++|++.+++...
T Consensus 92 ~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~ 171 (1045)
T 1k32_A 92 IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTF 171 (1045)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCS
T ss_pred eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCC
Confidence 34556677777 899999999977777644 357788876544221
Q ss_pred --------------------------ecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEE
Q 047260 544 --------------------------TPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMS 597 (784)
Q Consensus 544 --------------------------~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~s 597 (784)
.+.+|...+.++.|+++ .++++++.|+.++||++.........+..|. .+..
T Consensus 172 ~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~ 249 (1045)
T 1k32_A 172 ELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYP 249 (1045)
T ss_dssp CCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCE
T ss_pred CccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-Ccce
Confidence 22356778888999887 6677788889999998764332344455554 4677
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecC--------------CeeEEEEe-cCCCEEEEEECCCcEEEEECC
Q 047260 598 LDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKG--------------GTAQVRFQ-PRIGQLLAAASDKVVSIFDIE 662 (784)
Q Consensus 598 l~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~--------------~v~~v~fs-p~~~~Ll~~s~Dg~I~IwDl~ 662 (784)
++|+|++..+++. .++.|++||+...... .+.. .+..++|+ |++..|++++ ++.|.+|++.
T Consensus 250 ~~~SpDG~~la~~--~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~ 325 (1045)
T 1k32_A 250 RHLNTDGRRILFS--KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVS 325 (1045)
T ss_dssp EEEEESSSCEEEE--ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTT
T ss_pred eeEcCCCCEEEEE--eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCC
Confidence 8999999866554 4899999999554433 3333 58899999 9999988887 7899999998
Q ss_pred CCeEEEEEeCCCC-CEEEEEEcCCCCEEEEEeCC-eEE-EEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeE
Q 047260 663 TDRQTHSLQGHAE-LVNYICWDTNGDYLASVSQN-LVK-VWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSL 739 (784)
Q Consensus 663 t~~~i~~l~~h~~-~V~sl~~spdg~~Lasgsdd-~I~-IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I 739 (784)
.+... .+..|.. .+..++|+ +|+.|+.++++ .|. +||+.+++.. .+..+...+..++|+|++++|++++.++.|
T Consensus 326 ~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v 402 (1045)
T 1k32_A 326 GTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEI 402 (1045)
T ss_dssp SSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEE
T ss_pred CCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeE
Confidence 87654 3566777 89999999 99999988876 888 9999887654 444777889999999999999999999999
Q ss_pred EEEECCCCceEEec-ccCCceEEEEEeCCCCEEEEEECCC----------cEEEeC
Q 047260 740 ELWNMAENKSMTIA-AHENIISALAQSPVTGMVASASHDS----------SVKLWK 784 (784)
Q Consensus 740 ~Iwdl~~~~~~~~~-~h~~~V~slafspdg~~LaSgs~DG----------~V~IWd 784 (784)
++||+.+++...+. .|.+.|.+++|+|||++|++++.++ .|++||
T Consensus 403 ~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 403 MTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp EEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred EEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 99999999887555 8999999999999999999887654 899996
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=2.5e-21 Score=241.64 Aligned_cols=277 Identities=8% Similarity=0.011 Sum_probs=225.9
Q ss_pred EEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCC-CceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 499 EVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDT-LQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 499 ~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t-~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
+...+.+|...|.++.|+++ .++++++.|+.+.||.++. +.....+..|. .+..++|+|+|++|+++ .++.|.+||
T Consensus 195 ~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d 271 (1045)
T 1k32_A 195 AFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFN 271 (1045)
T ss_dssp EEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEEC
T ss_pred CeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEec
Confidence 34556889999999999988 6777888889999998753 44455565555 46778999999999888 489999999
Q ss_pred CCCCcceeeeccC-----------CCCCeEEEEEc-CCCCcEEEEEeCCCeEEEEeCCCCeeEEee--cC-CeeEEEEec
Q 047260 578 AANPNFCSQAYTG-----------HSSPIMSLDFH-PKKTDLFCFCDNDNEIQYWSINPFLCTHIT--KG-GTAQVRFQP 642 (784)
Q Consensus 578 l~~~~~~~~~~~~-----------h~~~V~sl~~s-p~~~~ll~sgs~dg~I~iwDl~~~~~~~~~--~~-~v~~v~fsp 642 (784)
+.... .. .+.. |...+.+++|+ |++..+++++ ++.|++|++......... .. .+..++|+
T Consensus 272 ~~~~~-l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 272 PDTEK-IE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp TTTCC-EE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEECSCCSCEEEEEECSS-
T ss_pred CCceE-ee-eeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEEccCCCcceEEeeeEc-
Confidence 95433 22 3333 33468999999 9998666554 889999999876654432 23 57788999
Q ss_pred CCCEEEEEECCCcEE-EEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCceEE
Q 047260 643 RIGQLLAAASDKVVS-IFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQFHS 720 (784)
Q Consensus 643 ~~~~Ll~~s~Dg~I~-IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I~s 720 (784)
++..|++++.++.|. +||+..++... +.+|...+..++|+|||++|++++.+ .|++||+.+++....+..|...+.+
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 425 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCC
T ss_pred CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccc
Confidence 999999998888888 99998776544 44788899999999999999998866 9999999999988887788888999
Q ss_pred EEEecCCCEEEEEECCC----------eEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 721 CVFHPSYSTLLVVGGIS----------SLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 721 l~fspdg~~L~s~s~dg----------~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
++|+|++++|++++.++ .|++||+.+++...+..|...+.+++|+|||++|++++.++.+.+|+
T Consensus 426 ~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 426 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp EEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred eEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 99999999998887644 89999999988778888999999999999999999999988877774
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=3.8e-21 Score=229.44 Aligned_cols=304 Identities=11% Similarity=0.055 Sum_probs=211.5
Q ss_pred cccccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCC---ceEEEEEcCC
Q 047260 442 SASNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNS---KVTCCHFSSD 518 (784)
Q Consensus 442 ss~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~---~V~~l~fspd 518 (784)
....+.++.. ++.+ +.|+++.+|+...+. ....+.+|.. .|.+++||||
T Consensus 20 ~~~~~spdg~-~~~~-~~dg~i~~~d~~~g~--------------------------~~~~~~~~~~~~~~v~~~~~SpD 71 (723)
T 1xfd_A 20 PEAKWISDTE-FIYR-EQKGTVRLWNVETNT--------------------------STVLIEGKKIESLRAIRYEISPD 71 (723)
T ss_dssp CCCCBSSSSC-BCCC-CSSSCEEEBCGGGCC--------------------------CEEEECTTTTTTTTCSEEEECTT
T ss_pred cccEEcCCCc-EEEE-eCCCCEEEEECCCCc--------------------------EEEEeccccccccccceEEECCC
Confidence 3445556665 4443 678889888764432 1122333443 4999999999
Q ss_pred CCEEEEEeCC---------CeEEEEECCCCce--eeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeee
Q 047260 519 GKLLASSGHD---------RKVVLWNMDTLQT--ESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 519 g~~Lasgs~D---------g~I~IWd~~t~~~--~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~ 587 (784)
|++|++++.+ +.|++||+.+++. +.....|...+.+++|+|||+.|++++. +.|++||+.+++. ...
T Consensus 72 g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~-~~~ 149 (723)
T 1xfd_A 72 REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA-IRV 149 (723)
T ss_dssp SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC-EEE
T ss_pred CCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce-EEE
Confidence 9999999764 7888999998876 2222345556899999999999999886 7999999988663 333
Q ss_pred ccCCCCC------------------eEEEEEcCCCCcEEEEEeCC---------------------------------Ce
Q 047260 588 YTGHSSP------------------IMSLDFHPKKTDLFCFCDND---------------------------------NE 616 (784)
Q Consensus 588 ~~~h~~~------------------V~sl~~sp~~~~ll~sgs~d---------------------------------g~ 616 (784)
...+... +.+++|+|++..++++...+ ..
T Consensus 150 ~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 229 (723)
T 1xfd_A 150 VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSIS 229 (723)
T ss_dssp ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEE
T ss_pred ecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeE
Confidence 3333332 37899999998666655332 27
Q ss_pred EEEEeCCCCeeEEeec---------CCeeEEEEecCCCEEEEEEC----CCcEEEEECCCCeEEEEEeC-CCCCE----E
Q 047260 617 IQYWSINPFLCTHITK---------GGTAQVRFQPRIGQLLAAAS----DKVVSIFDIETDRQTHSLQG-HAELV----N 678 (784)
Q Consensus 617 I~iwDl~~~~~~~~~~---------~~v~~v~fsp~~~~Ll~~s~----Dg~I~IwDl~t~~~i~~l~~-h~~~V----~ 678 (784)
|++||+.+.++...+. ..+..++|+|+++.+++... +..|++||+.+++....+.. +...+ .
T Consensus 230 l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 309 (723)
T 1xfd_A 230 LHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNE 309 (723)
T ss_dssp EEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCC
T ss_pred EEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCC
Confidence 9999998776433332 34678999999998866653 35799999999887766543 33433 3
Q ss_pred EEEEcCCCCEEEEE-e--CC------eEEEEe-CCCCc--eEEEeccCCCceEE-EEEecCCCEEEEEECC---CeEEEE
Q 047260 679 YICWDTNGDYLASV-S--QN------LVKVWS-MASGE--CIQELSSNGNQFHS-CVFHPSYSTLLVVGGI---SSLELW 742 (784)
Q Consensus 679 sl~~spdg~~Lasg-s--dd------~I~IwD-l~t~~--~i~~l~~~~~~I~s-l~fspdg~~L~s~s~d---g~I~Iw 742 (784)
.++|+|||+.|+.. + ++ .|.+|| ...+. ++..+..+...+.. ++|+|+++.|++.+.+ +.++||
T Consensus 310 ~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 389 (723)
T 1xfd_A 310 EPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLY 389 (723)
T ss_dssp CCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEE
T ss_pred CceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEE
Confidence 78999999977654 3 33 477788 34444 14555544444554 6899999999877765 789999
Q ss_pred ECCCCc---eEEecc---cCCceEEEEEeCCCCEEEEEE
Q 047260 743 NMAENK---SMTIAA---HENIISALAQSPVTGMVASAS 775 (784)
Q Consensus 743 dl~~~~---~~~~~~---h~~~V~slafspdg~~LaSgs 775 (784)
++.... ...+.. |...+..++|+||+++|+...
T Consensus 390 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 390 SANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp EECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred EEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 886432 223333 677789999999999877653
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=5.5e-21 Score=227.70 Aligned_cols=273 Identities=11% Similarity=0.118 Sum_probs=205.0
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCC-----
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAAN----- 580 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~----- 580 (784)
+...|.+++|+|| ++++.+. ++.|++||+.+++.... ..+...+.+++|+|||++|+++ .|+.|++||+.+
T Consensus 80 ~~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 80 DAFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGM 155 (706)
T ss_dssp --CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCC
T ss_pred cccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccC
Confidence 3467999999999 6666554 69999999998776544 4567789999999999999995 689999999987
Q ss_pred CcceeeeccCCCCC--------------eEEEEEcCCCCcEEEEEe--------------------------------CC
Q 047260 581 PNFCSQAYTGHSSP--------------IMSLDFHPKKTDLFCFCD--------------------------------ND 614 (784)
Q Consensus 581 ~~~~~~~~~~h~~~--------------V~sl~~sp~~~~ll~sgs--------------------------------~d 614 (784)
++ .......+... +.++.|+|++..+++++. .+
T Consensus 156 g~-~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 156 SR-AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CC-CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CC-cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 65 33333333232 489999999986665541 34
Q ss_pred CeEEEEeCCCCeeEEeec-----CCeeEEEEecCCCEEEEEECCC-----cEEEEECCCCeEEEEEe-C-CCC---CEEE
Q 047260 615 NEIQYWSINPFLCTHITK-----GGTAQVRFQPRIGQLLAAASDK-----VVSIFDIETDRQTHSLQ-G-HAE---LVNY 679 (784)
Q Consensus 615 g~I~iwDl~~~~~~~~~~-----~~v~~v~fsp~~~~Ll~~s~Dg-----~I~IwDl~t~~~i~~l~-~-h~~---~V~s 679 (784)
..|++||+.+.+...... ..+..++|+|+++.|++++.++ .|++||+.+++....+. . +.. .+.+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 679999999877655442 3478899999999999988765 89999999984333332 2 222 2467
Q ss_pred EEEcC--CCCEEEEEeCC-eEEEEeCC-CCceEEEeccCCCceEE-EEEecCCCEEEEEECC-C----eEEEEECCCCce
Q 047260 680 ICWDT--NGDYLASVSQN-LVKVWSMA-SGECIQELSSNGNQFHS-CVFHPSYSTLLVVGGI-S----SLELWNMAENKS 749 (784)
Q Consensus 680 l~~sp--dg~~Lasgsdd-~I~IwDl~-t~~~i~~l~~~~~~I~s-l~fspdg~~L~s~s~d-g----~I~Iwdl~~~~~ 749 (784)
++|+| +|++|++++.+ .++||++. ++..+..+..+...+.. ++|+|+++.|++++.+ + .|..||+.+++.
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 394 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT 394 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc
Confidence 89999 99998888754 78888776 66778888877777776 7999999988777665 3 677778877764
Q ss_pred EEecccCCceEEEEEeCCCCEEEEEECC----CcEEEeC
Q 047260 750 MTIAAHENIISALAQSPVTGMVASASHD----SSVKLWK 784 (784)
Q Consensus 750 ~~~~~h~~~V~slafspdg~~LaSgs~D----G~V~IWd 784 (784)
..+ .|...+.+++|+||+++|+..+.+ +.|++||
T Consensus 395 ~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 395 KDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp EES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred eec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 444 477789999999999988876544 4588885
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=1e-20 Score=202.18 Aligned_cols=266 Identities=11% Similarity=0.111 Sum_probs=202.1
Q ss_pred ceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEee-cCCC-ceEEEEEcCCCCEEE-EEeCC
Q 047260 452 RFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIR-SRNS-KVTCCHFSSDGKLLA-SSGHD 528 (784)
Q Consensus 452 ~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~-~H~~-~V~~l~fspdg~~La-sgs~D 528 (784)
.++.+++.++.|.+|+.... ..+..+. ++.. .+.+++|+|+|++|+ ++..+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~--------------------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 55 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM--------------------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS 55 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--------------------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCCC--------------------------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC
Confidence 35567888999999865321 1222222 1222 478899999998664 55567
Q ss_pred CeEEEEECCCCceeeecCC-C----CCCeEEEEEccCCCEEEEEe------------CCCeEEEEcCCCCcceeeeccCC
Q 047260 529 RKVVLWNMDTLQTESTPED-H----KSVVTDVRFRPNSSQLATAS------------VDKSVRLWDAANPNFCSQAYTGH 591 (784)
Q Consensus 529 g~I~IWd~~t~~~~~~l~~-h----~~~It~i~fspdg~~Latgs------------~Dg~I~IWdl~~~~~~~~~~~~h 591 (784)
+.|.+||+.+++.+..+.. + ...+.+++|+|++++|++++ .++.|.+||+.+++ ....+..
T Consensus 56 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-~~~~~~~- 133 (337)
T 1pby_B 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-RRKAFEA- 133 (337)
T ss_dssp TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-EEEEEEC-
T ss_pred CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc-EEEEEeC-
Confidence 8999999999988776642 1 22678899999999999886 57999999998766 3333333
Q ss_pred CCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCe--eEEEEecCCCEEEEEECC-C--------------
Q 047260 592 SSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGT--AQVRFQPRIGQLLAAASD-K-------------- 654 (784)
Q Consensus 592 ~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v--~~v~fsp~~~~Ll~~s~D-g-------------- 654 (784)
...+.+++|+|++..++++ ++.|++||+.+.+....+.... ..+.|+|++..+++.+.+ +
T Consensus 134 ~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~ 210 (337)
T 1pby_B 134 PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDID 210 (337)
T ss_dssp CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSC
T ss_pred CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccc
Confidence 4567889999999866665 6899999999888776654322 345788888877665543 2
Q ss_pred ---------cEEEEECCCCeEE-EEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEEEEe
Q 047260 655 ---------VVSIFDIETDRQT-HSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSCVFH 724 (784)
Q Consensus 655 ---------~I~IwDl~t~~~i-~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fs 724 (784)
.|.+||+.+++.. ..+..+...+.+++|+|++++|+++ ++.|.+||+.+++.+..+..+ ..+.+++|+
T Consensus 211 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s 288 (337)
T 1pby_B 211 PADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLP-HSYYSVNVS 288 (337)
T ss_dssp TTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECS-SCCCEEEEC
T ss_pred cccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCC-CceeeEEEC
Confidence 4689999998764 2344566788999999999999888 679999999999988877644 567899999
Q ss_pred cCCCEEEEEECCCeEEEEECCCCceE
Q 047260 725 PSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 725 pdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
|++++|++++.++.|.+||+.+++.+
T Consensus 289 ~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 289 TDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp TTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred CCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 99999999988999999999998876
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=4.8e-20 Score=219.56 Aligned_cols=243 Identities=13% Similarity=0.147 Sum_probs=183.9
Q ss_pred eecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCC-----CceeeecCCCCCC--------------eEEEEEccCCCE
Q 047260 503 IRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDT-----LQTESTPEDHKSV--------------VTDVRFRPNSSQ 563 (784)
Q Consensus 503 l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t-----~~~~~~l~~h~~~--------------It~i~fspdg~~ 563 (784)
+..+...+.+++|||||++||++ .|+.|++||+.+ ++.......+... +.++.|+|||++
T Consensus 116 l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~ 194 (706)
T 2z3z_A 116 LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC 194 (706)
T ss_dssp EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE
T ss_pred ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE
Confidence 44567778999999999999985 689999999998 7776655444443 489999999999
Q ss_pred EEEEe---------------------------------CCCeEEEEcCCCCcceeeec-cCCCCCeEEEEEcCCCCcEEE
Q 047260 564 LATAS---------------------------------VDKSVRLWDAANPNFCSQAY-TGHSSPIMSLDFHPKKTDLFC 609 (784)
Q Consensus 564 Latgs---------------------------------~Dg~I~IWdl~~~~~~~~~~-~~h~~~V~sl~~sp~~~~ll~ 609 (784)
|++++ .+..|++||+.+++...... ..|...+.+++|+|++..+++
T Consensus 195 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 274 (706)
T 2z3z_A 195 LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYV 274 (706)
T ss_dssp EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEE
Confidence 99998 44679999998866322221 246678999999999986655
Q ss_pred EEeCC----CeEEEEeCCCC-eeEEee--cC-----CeeEEEEec--CCCEEEEEECCCcEEEEECC-CCeEEEEEeCCC
Q 047260 610 FCDND----NEIQYWSINPF-LCTHIT--KG-----GTAQVRFQP--RIGQLLAAASDKVVSIFDIE-TDRQTHSLQGHA 674 (784)
Q Consensus 610 sgs~d----g~I~iwDl~~~-~~~~~~--~~-----~v~~v~fsp--~~~~Ll~~s~Dg~I~IwDl~-t~~~i~~l~~h~ 674 (784)
++... ..|++||+.++ ...... .. .+..+.|+| ++++++++..|+.++||++. +++.+..+..+.
T Consensus 275 ~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~ 354 (706)
T 2z3z_A 275 AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE 354 (706)
T ss_dssp EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS
T ss_pred EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC
Confidence 44322 38999999987 333222 11 235689999 99988888889999999886 667777887787
Q ss_pred CCEEE-EEEcCCCCEEEEEe-C-C----eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECC----CeEEEEE
Q 047260 675 ELVNY-ICWDTNGDYLASVS-Q-N----LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGI----SSLELWN 743 (784)
Q Consensus 675 ~~V~s-l~~spdg~~Lasgs-d-d----~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~d----g~I~Iwd 743 (784)
..+.. ++|+|+++.|+.++ + + .|..||+.+++ +..+. +...+.+++|+|++++|++...+ +.|++||
T Consensus 355 ~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 355 WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 77876 79999999876655 2 2 67777877765 33443 56678999999999988877554 4699999
Q ss_pred CCCCc
Q 047260 744 MAENK 748 (784)
Q Consensus 744 l~~~~ 748 (784)
+.+++
T Consensus 433 ~~~~~ 437 (706)
T 2z3z_A 433 IGKGS 437 (706)
T ss_dssp SSSCE
T ss_pred CCCCe
Confidence 98886
No 149
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=1.3e-18 Score=189.55 Aligned_cols=257 Identities=15% Similarity=0.137 Sum_probs=187.5
Q ss_pred CCCceEEEEEcCCCCEEEEEeCC----CeEEEEECCC--Cc--eeeecCCCCCCeEEEEEccCCCEEEEEe-CCCeEEEE
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHD----RKVVLWNMDT--LQ--TESTPEDHKSVVTDVRFRPNSSQLATAS-VDKSVRLW 576 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~D----g~I~IWd~~t--~~--~~~~l~~h~~~It~i~fspdg~~Latgs-~Dg~I~IW 576 (784)
|...+..++|+|||++|++++.+ +.|.+|+++. ++ .+.....+......+++ ++++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 67778889999999999998876 7999998865 43 33344445667788888 788887776 57899999
Q ss_pred cCCCCcceeee-----cc--------CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee--------------EE
Q 047260 577 DAANPNFCSQA-----YT--------GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC--------------TH 629 (784)
Q Consensus 577 dl~~~~~~~~~-----~~--------~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~--------------~~ 629 (784)
++......... .. .+...+.+++|+|++..+++++..++.|.+|+++.... ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754322111 11 12234688999999998888877799999998874321 11
Q ss_pred ee--cCCeeEEEEecCCCEEEEEE-CCCcEEEEECCCCeE--EEEEe---CCCCCEEEEEEcCCCCEEEEEe-C--CeEE
Q 047260 630 IT--KGGTAQVRFQPRIGQLLAAA-SDKVVSIFDIETDRQ--THSLQ---GHAELVNYICWDTNGDYLASVS-Q--NLVK 698 (784)
Q Consensus 630 ~~--~~~v~~v~fsp~~~~Ll~~s-~Dg~I~IwDl~t~~~--i~~l~---~h~~~V~sl~~spdg~~Lasgs-d--d~I~ 698 (784)
.. ......++|+|+++++++++ .++.|.+||+.+++. +..+. .+......++|+|||++|+++. + +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 11 24567899999999998888 489999999987754 33332 2345678999999999886655 4 4899
Q ss_pred EEeCC--CCc--eEEEeccCCCceEEEEEecCCCEEEEEE-CCCeEEEEE--CCCCceEEec--ccCCceEEEEEe
Q 047260 699 VWSMA--SGE--CIQELSSNGNQFHSCVFHPSYSTLLVVG-GISSLELWN--MAENKSMTIA--AHENIISALAQS 765 (784)
Q Consensus 699 IwDl~--t~~--~i~~l~~~~~~I~sl~fspdg~~L~s~s-~dg~I~Iwd--l~~~~~~~~~--~h~~~V~slafs 765 (784)
||++. +++ .+..+.. ...+..++|+|++++|++++ .++.|.+|+ ..+++...+. .+...+.||+|.
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99996 444 4555554 56788999999999999888 568899964 5566665443 345678999886
No 150
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=5.8e-20 Score=201.56 Aligned_cols=283 Identities=14% Similarity=0.101 Sum_probs=202.9
Q ss_pred EEeEeecCCCceEE-----EEEcCCCCEEEEEeC-CC--eEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCC
Q 047260 499 EVGCIRSRNSKVTC-----CHFSSDGKLLASSGH-DR--KVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVD 570 (784)
Q Consensus 499 ~i~~l~~H~~~V~~-----l~fspdg~~Lasgs~-Dg--~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~D 570 (784)
++..+..|...+.. .+|+|||++|+.++. ++ .|.+||+.+++.......+...+..+.|+||++.|++++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 34455566665655 889999999998887 66 48889999988887777777777678999999999999999
Q ss_pred CeEEEEcCCCCcceeeeccCCCCCeEEEE--EcCCCCcEEEEE---------------------eCCCeEEEEeCCCCee
Q 047260 571 KSVRLWDAANPNFCSQAYTGHSSPIMSLD--FHPKKTDLFCFC---------------------DNDNEIQYWSINPFLC 627 (784)
Q Consensus 571 g~I~IWdl~~~~~~~~~~~~h~~~V~sl~--~sp~~~~ll~sg---------------------s~dg~I~iwDl~~~~~ 627 (784)
+.|++||+.+++ ....+..+...+.... +++++..+++.. ..+..|++||+.+++.
T Consensus 102 ~~l~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 102 RNLMRVDLATLE-ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp TEEEEEETTTCC-EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred CeEEEEECCCCc-ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 999999999876 3344444555454444 478887554322 2346899999987665
Q ss_pred EEee--cCCeeEEEEec-CCCEEEEEECC------CcEEEEECCCCeEEEEEeCCC--CCEEEEEEcCCCCEEEEEe--C
Q 047260 628 THIT--KGGTAQVRFQP-RIGQLLAAASD------KVVSIFDIETDRQTHSLQGHA--ELVNYICWDTNGDYLASVS--Q 694 (784)
Q Consensus 628 ~~~~--~~~v~~v~fsp-~~~~Ll~~s~D------g~I~IwDl~t~~~i~~l~~h~--~~V~sl~~spdg~~Lasgs--d 694 (784)
.... ...+..+.|+| +++.|+.+..+ ..|.++|+..+.. ..+..+. ..+..++|+|||+.|+..+ +
T Consensus 181 ~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 181 TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLK 259 (388)
T ss_dssp EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCC
Confidence 4443 35678899999 99988877763 3788888876543 3344343 3578899999999776544 2
Q ss_pred C----eEEEEeCCCCceE--EEeccCCC---ceEEEEEecCCCEEEEE---------ECCCeEEEEECCCCceEEecccC
Q 047260 695 N----LVKVWSMASGECI--QELSSNGN---QFHSCVFHPSYSTLLVV---------GGISSLELWNMAENKSMTIAAHE 756 (784)
Q Consensus 695 d----~I~IwDl~t~~~i--~~l~~~~~---~I~sl~fspdg~~L~s~---------s~dg~I~Iwdl~~~~~~~~~~h~ 756 (784)
+ .|++||+.+++.. ..+..+.. ....+.|+|+|+.|++. ..+..|++||+.+++...+..|.
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 339 (388)
T 3pe7_A 260 GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHD 339 (388)
T ss_dssp TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECC
T ss_pred CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEecccc
Confidence 2 3999999998743 33332100 01223799999988765 34568999999998887777776
Q ss_pred C-----------ceEEEEEeCCCCEEEEEE-CCCcEEEe
Q 047260 757 N-----------IISALAQSPVTGMVASAS-HDSSVKLW 783 (784)
Q Consensus 757 ~-----------~V~slafspdg~~LaSgs-~DG~V~IW 783 (784)
. .+.+++|+|||+.|+.++ .+|...||
T Consensus 340 ~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 340 TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEE
Confidence 6 688899999999887766 47777777
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=3.4e-19 Score=192.98 Aligned_cols=254 Identities=9% Similarity=0.142 Sum_probs=178.9
Q ss_pred CCeEEEEECC--CCceee-ecCCCCCCeEEEEEccCCCEEEEEeC---CCeEEEEcCCCCcc-eeeeccCCCCCeEEEEE
Q 047260 528 DRKVVLWNMD--TLQTES-TPEDHKSVVTDVRFRPNSSQLATASV---DKSVRLWDAANPNF-CSQAYTGHSSPIMSLDF 600 (784)
Q Consensus 528 Dg~I~IWd~~--t~~~~~-~l~~h~~~It~i~fspdg~~Latgs~---Dg~I~IWdl~~~~~-~~~~~~~h~~~V~sl~~ 600 (784)
++.|.+|+++ +++... ....+...+..++|+|+++ |++++. ++.|.+||+.++.. ....+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 4557777654 455433 2234557788899999999 665554 68999999976542 22333446677899999
Q ss_pred cCCCCcEEEEEeCCCeEEEEeCCC---CeeEEeec------------CCeeEEEEecCCCEEEEEE-CCCcEEEEECC-C
Q 047260 601 HPKKTDLFCFCDNDNEIQYWSINP---FLCTHITK------------GGTAQVRFQPRIGQLLAAA-SDKVVSIFDIE-T 663 (784)
Q Consensus 601 sp~~~~ll~sgs~dg~I~iwDl~~---~~~~~~~~------------~~v~~v~fsp~~~~Ll~~s-~Dg~I~IwDl~-t 663 (784)
+|++..+++++..++.|.+|++.. ...+.... ..+.+++|+|+++ ++++. .++.|.+||+. +
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTT
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCC
Confidence 999997777666889999999962 23333222 1367899999999 55554 47899999998 4
Q ss_pred CeEE--EEEeCC-CCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCC--Cce--EEEeccCC------CceEEEEEecCCC
Q 047260 664 DRQT--HSLQGH-AELVNYICWDTNGDYLASVS--QNLVKVWSMAS--GEC--IQELSSNG------NQFHSCVFHPSYS 728 (784)
Q Consensus 664 ~~~i--~~l~~h-~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t--~~~--i~~l~~~~------~~I~sl~fspdg~ 728 (784)
++.. ..+..+ ...+..++|+|+|++|++++ ++.|.+|++.. ++. +..+.... ..+..++|+|+++
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 5432 222332 33678899999999777765 34999999874 543 33333222 4578899999999
Q ss_pred EEEEE-ECCCeEEEEECCCC---ceE-EecccCCceEEEEEeCCCCEEEEEECC-CcEEEe
Q 047260 729 TLLVV-GGISSLELWNMAEN---KSM-TIAAHENIISALAQSPVTGMVASASHD-SSVKLW 783 (784)
Q Consensus 729 ~L~s~-s~dg~I~Iwdl~~~---~~~-~~~~h~~~V~slafspdg~~LaSgs~D-G~V~IW 783 (784)
+|+++ ..++.|.+|++... +.+ .+..+...+.+++|+||+++|++++.+ +.|.+|
T Consensus 253 ~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 88554 55789999999733 222 344556678999999999988888764 899999
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=7.6e-19 Score=190.21 Aligned_cols=244 Identities=14% Similarity=0.158 Sum_probs=179.4
Q ss_pred cCCCceEEEEEcCCCCEEEEEeC---CCeEEEEECCCCc--eeeecCCCCCCeEEEEEccCCCEEEEEe-CCCeEEEEcC
Q 047260 505 SRNSKVTCCHFSSDGKLLASSGH---DRKVVLWNMDTLQ--TESTPEDHKSVVTDVRFRPNSSQLATAS-VDKSVRLWDA 578 (784)
Q Consensus 505 ~H~~~V~~l~fspdg~~Lasgs~---Dg~I~IWd~~t~~--~~~~l~~h~~~It~i~fspdg~~Latgs-~Dg~I~IWdl 578 (784)
.+...+..++|+|||+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|++++|++++ .++.|.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 3456788899999999 555544 6899999997665 3444445777899999999999998888 6799999999
Q ss_pred CCCcce--eeeccC---------CCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCC-CCeeEEe----e-c-CCeeEEEE
Q 047260 579 ANPNFC--SQAYTG---------HSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSIN-PFLCTHI----T-K-GGTAQVRF 640 (784)
Q Consensus 579 ~~~~~~--~~~~~~---------h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~-~~~~~~~----~-~-~~v~~v~f 640 (784)
...... ...+.. +...+.+++|+|++. ++++...++.|++||+. .+..... . . .....++|
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 632211 111111 123488999999999 88888889999999998 3432211 1 1 25678999
Q ss_pred ecCCCEEEEEEC-CCcEEEEECCC--CeE--EEEEeCCC------CCEEEEEEcCCCCEEEEEe--CCeEEEEeCCC---
Q 047260 641 QPRIGQLLAAAS-DKVVSIFDIET--DRQ--THSLQGHA------ELVNYICWDTNGDYLASVS--QNLVKVWSMAS--- 704 (784)
Q Consensus 641 sp~~~~Ll~~s~-Dg~I~IwDl~t--~~~--i~~l~~h~------~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t--- 704 (784)
+|+++++++++. ++.|.+|++.. ++. +..+.... ..+..++|+|+|++|+++. ++.|.+||+..
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH 274 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc
Confidence 999998777655 78999999874 443 33333322 4588999999999875544 45999999973
Q ss_pred CceEEEeccCCCceEEEEEecCCCEEEEEECC-CeEEEE--ECCCCceE
Q 047260 705 GECIQELSSNGNQFHSCVFHPSYSTLLVVGGI-SSLELW--NMAENKSM 750 (784)
Q Consensus 705 ~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~d-g~I~Iw--dl~~~~~~ 750 (784)
.+.+..+..+...+..++|+|++++|++++.+ +.|.+| |..+++..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 275 LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 25566666666778999999999999888875 799999 55566655
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=1e-19 Score=195.67 Aligned_cols=268 Identities=9% Similarity=0.041 Sum_probs=190.8
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCC-CCeEEEEEccCCCEEE-EEeCCCeEEEEcCCCCcceeeecc
Q 047260 512 CCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHK-SVVTDVRFRPNSSQLA-TASVDKSVRLWDAANPNFCSQAYT 589 (784)
Q Consensus 512 ~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~-~~It~i~fspdg~~La-tgs~Dg~I~IWdl~~~~~~~~~~~ 589 (784)
.+++++++.++++++.++.|++||+.+++.+..+..+. ..+..++|+|++++++ ++..++.|.+||+.+++.......
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678888999999999999999999998888776443 2578999999998665 445689999999998763322222
Q ss_pred CC-----CCCeEEEEEcCCCCcEEEEEeC-----------CCeEEEEeCCCC---eeEEe--ecCCeeEEEEecCCCEEE
Q 047260 590 GH-----SSPIMSLDFHPKKTDLFCFCDN-----------DNEIQYWSINPF---LCTHI--TKGGTAQVRFQPRIGQLL 648 (784)
Q Consensus 590 ~h-----~~~V~sl~~sp~~~~ll~sgs~-----------dg~I~iwDl~~~---~~~~~--~~~~v~~v~fsp~~~~Ll 648 (784)
.+ ...+.+++|+|++..++++... ++.|.+||+.+. ..+.. ....+.+++|+|+++ ++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EE
Confidence 22 2337889999999866665543 589999999863 22222 234578889999999 66
Q ss_pred EEECCCcEEEEECCCCeEEEEEeCCCC------------------------CEEEEEEcCCCCEEEEEeCC--eEEEEeC
Q 047260 649 AAASDKVVSIFDIETDRQTHSLQGHAE------------------------LVNYICWDTNGDYLASVSQN--LVKVWSM 702 (784)
Q Consensus 649 ~~s~Dg~I~IwDl~t~~~i~~l~~h~~------------------------~V~sl~~spdg~~Lasgsdd--~I~IwDl 702 (784)
+++ +.|.+||+.+++.+..+..+.. ....+++++++.......++ .+..+|.
T Consensus 163 ~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 240 (349)
T 1jmx_B 163 VAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 240 (349)
T ss_dssp EES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred Ecc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence 653 4499999999988877754320 33456666554322111111 2333566
Q ss_pred CCCce-EEEeccCCCceEEEEEec-CCCEEEEEECCCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcE
Q 047260 703 ASGEC-IQELSSNGNQFHSCVFHP-SYSTLLVVGGISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSV 780 (784)
Q Consensus 703 ~t~~~-i~~l~~~~~~I~sl~fsp-dg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V 780 (784)
.+++. +..+..+...+..++|+| ++++++++ ++.|.+||+.+++.+........+.+++|+|++++|++++.++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 241 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDL 318 (349)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEE
T ss_pred cCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeE
Confidence 65542 222334556788999999 99998888 889999999999887555455668899999999988888889999
Q ss_pred EEeC
Q 047260 781 KLWK 784 (784)
Q Consensus 781 ~IWd 784 (784)
++||
T Consensus 319 ~v~d 322 (349)
T 1jmx_B 319 AVFN 322 (349)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9996
No 154
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=1.2e-18 Score=187.92 Aligned_cols=234 Identities=8% Similarity=0.056 Sum_probs=188.8
Q ss_pred CCCCeEEEEEccCCCEEEEEeC-------CCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEE
Q 047260 548 HKSVVTDVRFRPNSSQLATASV-------DKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYW 620 (784)
Q Consensus 548 h~~~It~i~fspdg~~Latgs~-------Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iw 620 (784)
....+..++|+|++++|++++. ++.|.+||..+++. ...+.. ...+..++|+|++..+++++..++.|.+|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV-TQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE-EEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE-EEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 3456789999999999988874 56899999998773 333332 34578899999999888888889999999
Q ss_pred eCCCCeeEEeecC------------CeeEEEEecCCCEEEEEE--CCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCC
Q 047260 621 SINPFLCTHITKG------------GTAQVRFQPRIGQLLAAA--SDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNG 686 (784)
Q Consensus 621 Dl~~~~~~~~~~~------------~v~~v~fsp~~~~Ll~~s--~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg 686 (784)
|+.+.+.+..+.. .+..+.|+|+++++++++ .++.|.+||+++++.+..+..+...+.+++|+|++
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 9998877665542 157899999999888887 37889999999999998887666678899999999
Q ss_pred CEEEEEeCC-eEEEEeCCCCceEEEecc----CCCceEEEEEecCCCEEEEEECC-CeEEEEECCCCceEEecccCCceE
Q 047260 687 DYLASVSQN-LVKVWSMASGECIQELSS----NGNQFHSCVFHPSYSTLLVVGGI-SSLELWNMAENKSMTIAAHENIIS 760 (784)
Q Consensus 687 ~~Lasgsdd-~I~IwDl~t~~~i~~l~~----~~~~I~sl~fspdg~~L~s~s~d-g~I~Iwdl~~~~~~~~~~h~~~V~ 760 (784)
++|++++.+ .|.+||+.+++.+..+.. +...+..++|+|+++++++++.+ +.|.+||+.+++......... ..
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~ 275 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-SL 275 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CC
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-Cc
Confidence 988888755 999999999998887764 44567889999999988877765 899999999988774333222 25
Q ss_pred EEEEeCCCCEEEEEE-CCCcEEEeC
Q 047260 761 ALAQSPVTGMVASAS-HDSSVKLWK 784 (784)
Q Consensus 761 slafspdg~~LaSgs-~DG~V~IWd 784 (784)
+++|+|+++++++++ .++.|.+||
T Consensus 276 ~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eEEECCCCCEEEEEECCCCeEEEEE
Confidence 799999999666665 689999996
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=1.4e-18 Score=189.37 Aligned_cols=263 Identities=9% Similarity=0.067 Sum_probs=185.9
Q ss_pred CCEEEEEe----CCCeEEEEEC--CCCceeeecCCCCCCeEEEEEccCCCEEEEEeCC----CeEEEEcCCCC--cc-ee
Q 047260 519 GKLLASSG----HDRKVVLWNM--DTLQTESTPEDHKSVVTDVRFRPNSSQLATASVD----KSVRLWDAANP--NF-CS 585 (784)
Q Consensus 519 g~~Lasgs----~Dg~I~IWd~--~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~D----g~I~IWdl~~~--~~-~~ 585 (784)
..++++|+ .++.|.+|++ .+++.......+...+..++|+|++++|++++.+ +.|.+|++... .. .+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 34556664 3567889876 4454433222267788889999999999999886 79999998763 21 22
Q ss_pred eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE------ee-----------cCCeeEEEEecCCCEEE
Q 047260 586 QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTH------IT-----------KGGTAQVRFQPRIGQLL 648 (784)
Q Consensus 586 ~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~------~~-----------~~~v~~v~fsp~~~~Ll 648 (784)
.....+...+..+++ ++..++++...++.|.+|++.....+. .+ ...+.+++|+|++++++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 223335556778888 777677777789999999997432211 11 12347799999999888
Q ss_pred EEEC-CCcEEEEECCCCe-------E------EEEEeCCCCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCCCce--EEE
Q 047260 649 AAAS-DKVVSIFDIETDR-------Q------THSLQGHAELVNYICWDTNGDYLASVS--QNLVKVWSMASGEC--IQE 710 (784)
Q Consensus 649 ~~s~-Dg~I~IwDl~t~~-------~------i~~l~~h~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t~~~--i~~ 710 (784)
+++. ++.|.+|++.... . ......+...+..++|+|+|++|++++ ++.|.+||+.+++. +..
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 7776 7999999887543 1 111223455688999999999888777 44999999987754 333
Q ss_pred ec---cCCCceEEEEEecCCCEEEEEECC--CeEEEEECC--CCceE--EecccCCceEEEEEeCCCCEEEEEE-CCCcE
Q 047260 711 LS---SNGNQFHSCVFHPSYSTLLVVGGI--SSLELWNMA--ENKSM--TIAAHENIISALAQSPVTGMVASAS-HDSSV 780 (784)
Q Consensus 711 l~---~~~~~I~sl~fspdg~~L~s~s~d--g~I~Iwdl~--~~~~~--~~~~h~~~V~slafspdg~~LaSgs-~DG~V 780 (784)
+. .+......++|+|++++|+++..+ +.|.+|++. +++.. ........+.+++|+||+++|++++ .++.|
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v 330 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVI 330 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCE
Confidence 32 233456899999999999877765 799999986 44432 2222255788999999999988888 67899
Q ss_pred EEe
Q 047260 781 KLW 783 (784)
Q Consensus 781 ~IW 783 (784)
.+|
T Consensus 331 ~v~ 333 (361)
T 3scy_A 331 QIF 333 (361)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=3.3e-19 Score=201.07 Aligned_cols=236 Identities=9% Similarity=0.121 Sum_probs=174.2
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----------eeee-----cCCCCCCeEEEEEccCCCEEE----EE
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ----------TEST-----PEDHKSVVTDVRFRPNSSQLA----TA 567 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~----------~~~~-----l~~h~~~It~i~fspdg~~La----tg 567 (784)
...++++++++++.+|++++.|+ |+||+..... .+.. ...|...|++++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34588999999999999999888 8998753210 1110 113567899999999999999 78
Q ss_pred eCCCeEEEEcCCCC-----cc-----eeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe---ecCC
Q 047260 568 SVDKSVRLWDAANP-----NF-----CSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI---TKGG 634 (784)
Q Consensus 568 s~Dg~I~IWdl~~~-----~~-----~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~---~~~~ 634 (784)
+.|+.|+|||+.+. .. ....+.+|...|.+++|+|+...+|++++.||.|++||+++...... +...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 88999999998653 11 24556679999999999999777999999999999999998765533 3468
Q ss_pred eeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCC-------CCEEEEEEcCCCCEEEEEe--CC------eEEE
Q 047260 635 TAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHA-------ELVNYICWDTNGDYLASVS--QN------LVKV 699 (784)
Q Consensus 635 v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~-------~~V~sl~~spdg~~Lasgs--dd------~I~I 699 (784)
+.+++|+|++.+|++++.||.|++||++ ++....+..|. ..|.+++|++++.++++.+ ++ .+++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i 273 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM 273 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence 9999999999999999999999999998 55555554432 3899999999988886654 22 4999
Q ss_pred EeCCCCc-----eEEEec-------cCCCceEEEEEecCCCEEEEEECC-CeEEEEEC
Q 047260 700 WSMASGE-----CIQELS-------SNGNQFHSCVFHPSYSTLLVVGGI-SSLELWNM 744 (784)
Q Consensus 700 wDl~t~~-----~i~~l~-------~~~~~I~sl~fspdg~~L~s~s~d-g~I~Iwdl 744 (784)
|+++..+ ....+. ....+...+.+.++.+++++++.. ..|.|+..
T Consensus 274 ~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 274 ALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp EECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred EEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEe
Confidence 9998642 112221 112223344455777777777664 34555543
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=3.5e-20 Score=221.39 Aligned_cols=266 Identities=14% Similarity=0.152 Sum_probs=200.7
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCC---CeEEEEEccCCCEEEEEeC---------CCeEEEEcCC
Q 047260 512 CCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKS---VVTDVRFRPNSSQLATASV---------DKSVRLWDAA 579 (784)
Q Consensus 512 ~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~---~It~i~fspdg~~Latgs~---------Dg~I~IWdl~ 579 (784)
+++|+|||+++++ +.|+.|++||+.+++....+..|.. .|.+++|+|||++|++++. |+.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999976554 5699999999999988777765543 4899999999999999876 7899999999
Q ss_pred CCccee-eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCC---------------------eeE
Q 047260 580 NPNFCS-QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGG---------------------TAQ 637 (784)
Q Consensus 580 ~~~~~~-~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~---------------------v~~ 637 (784)
+++... ..+ ...+.+++|+|+|..++++ . ++.|++||+.++......... ...
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~-~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYV-Y-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEE-E-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCccccceec---CcccccceECCCCCEEEEE-E-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 876310 112 2568899999999966554 3 789999999877665443211 147
Q ss_pred EEEecCCCEEEEEECCC----------------------------------cEEEEECCCCeEE--EE------EeCCCC
Q 047260 638 VRFQPRIGQLLAAASDK----------------------------------VVSIFDIETDRQT--HS------LQGHAE 675 (784)
Q Consensus 638 v~fsp~~~~Ll~~s~Dg----------------------------------~I~IwDl~t~~~i--~~------l~~h~~ 675 (784)
++|+|+|+.|++++.|. .|++||+.+++.. .. +.+|..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 99999999999887642 7889999987642 11 235778
Q ss_pred CEEEEEEcCCCCEEEEEeCC-----eEEEEe----CCCCceEEEe----ccCCCceE-----EEEEecCCCEEEE--EEC
Q 047260 676 LVNYICWDTNGDYLASVSQN-----LVKVWS----MASGECIQEL----SSNGNQFH-----SCVFHPSYSTLLV--VGG 735 (784)
Q Consensus 676 ~V~sl~~spdg~~Lasgsdd-----~I~IwD----l~t~~~i~~l----~~~~~~I~-----sl~fspdg~~L~s--~s~ 735 (784)
.+..++|+||++++++..+. .|.+|| +.++++...+ ..+...+. .+.|+|+++.|+. ...
T Consensus 254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 89999999998877775421 589999 8777665444 35556666 7899999997655 334
Q ss_pred CC--eEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECC-----CcEEEeC
Q 047260 736 IS--SLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHD-----SSVKLWK 784 (784)
Q Consensus 736 dg--~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~D-----G~V~IWd 784 (784)
+| .|.+||+.+++...+..+...|..+.++ +++.|+..+.+ +.++||+
T Consensus 334 ~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 334 DGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp TSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred CCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 44 6888898888766777777778888888 88877777665 7788884
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=2.7e-19 Score=213.67 Aligned_cols=272 Identities=10% Similarity=0.028 Sum_probs=190.2
Q ss_pred ceEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCC
Q 047260 509 KVTCCHFSSDGKLLASSGH---------DRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAA 579 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~---------Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~ 579 (784)
.|.+++|||||++|++++. ++.|++||+.+++.+... .....+.+++|+|||+.|+++. |+.|++||+.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~ 138 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRP 138 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESST
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCC
Confidence 4889999999999998876 789999999988763111 1135689999999999999986 7899999998
Q ss_pred CCcceeeeccCCCCCe-----------------EEEEEcCCCCcEEEEEeCCC---------------------------
Q 047260 580 NPNFCSQAYTGHSSPI-----------------MSLDFHPKKTDLFCFCDNDN--------------------------- 615 (784)
Q Consensus 580 ~~~~~~~~~~~h~~~V-----------------~sl~~sp~~~~ll~sgs~dg--------------------------- 615 (784)
++........++...| .+++|+||+..++++...++
T Consensus 139 ~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g 218 (719)
T 1z68_A 139 GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAG 218 (719)
T ss_dssp TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTT
T ss_pred CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCC
Confidence 8664322223333322 48999999986665554322
Q ss_pred ------eEEEEeCCCCeeE---Ee--------ecCCeeEEEEecCCCEEEEEECC----CcEEEEE----CCCCeEEEEE
Q 047260 616 ------EIQYWSINPFLCT---HI--------TKGGTAQVRFQPRIGQLLAAASD----KVVSIFD----IETDRQTHSL 670 (784)
Q Consensus 616 ------~I~iwDl~~~~~~---~~--------~~~~v~~v~fsp~~~~Ll~~s~D----g~I~IwD----l~t~~~i~~l 670 (784)
.|++||+.+.... .. ....+..++|+|++..+++.... ..|.+|| +.+++....+
T Consensus 219 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 219 AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred CCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEE
Confidence 7889999876542 11 22356889999996655554332 2488999 8777655444
Q ss_pred ----eCCCCCEE-----EEEEcCCCCEEEE--Ee-CC--eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECC
Q 047260 671 ----QGHAELVN-----YICWDTNGDYLAS--VS-QN--LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGI 736 (784)
Q Consensus 671 ----~~h~~~V~-----sl~~spdg~~Las--gs-dd--~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~d 736 (784)
..|...+. .+.|+|||+.|+. .. ++ .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 299 EHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp EEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred ecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEec
Confidence 35666666 7899999996554 32 33 78899988776 45666666667888877 88888877765
Q ss_pred -----CeEEEEECCC--Cc--eEEec----ccCCceEEEEEeCCCCEEEE-EECC--CcEEEeC
Q 047260 737 -----SSLELWNMAE--NK--SMTIA----AHENIISALAQSPVTGMVAS-ASHD--SSVKLWK 784 (784)
Q Consensus 737 -----g~I~Iwdl~~--~~--~~~~~----~h~~~V~slafspdg~~LaS-gs~D--G~V~IWd 784 (784)
+.+++|.+.. +. ...+. +|...+..+.|+|++++|+. ++.+ ..+.+||
T Consensus 377 ~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d 440 (719)
T 1z68_A 377 FEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHD 440 (719)
T ss_dssp GGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEEC
T ss_pred CCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEE
Confidence 7788887653 32 22332 26667889999999886664 3333 3456664
No 159
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=1.7e-18 Score=189.77 Aligned_cols=270 Identities=13% Similarity=0.054 Sum_probs=188.5
Q ss_pred ceEEEEEcCCCCEEEEEeCC---CeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCccee
Q 047260 509 KVTCCHFSSDGKLLASSGHD---RKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCS 585 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~D---g~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~ 585 (784)
.+.+++|+|||++|+.+... ..|.+||+.+++.......+...+..+.|+|++++|+.++.++.|++||+.+++ ..
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~-~~ 115 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE-EQ 115 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC-EE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC-cE
Confidence 37788999999998877543 368899999887655444333334448899999999999999999999998765 33
Q ss_pred eeccCCCCCeEE-------------------EEEcCCCCcEEEEE----eCCCeEEEEeCCCCeeEEe--ecCCeeEEEE
Q 047260 586 QAYTGHSSPIMS-------------------LDFHPKKTDLFCFC----DNDNEIQYWSINPFLCTHI--TKGGTAQVRF 640 (784)
Q Consensus 586 ~~~~~h~~~V~s-------------------l~~sp~~~~ll~sg----s~dg~I~iwDl~~~~~~~~--~~~~v~~v~f 640 (784)
.....+...... +.|+|++..+++.. ..+..|++||+.+.+.... ....+..+.|
T Consensus 116 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~ 195 (396)
T 3c5m_A 116 VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIY 195 (396)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEE
T ss_pred EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceE
Confidence 333333332222 34567766544432 4567899999987655433 3456788999
Q ss_pred ec-CCCEEEEEECC------CcEEEEECCCCeEEEEEeCC--CCCEEEEEEcCCCCEEEEEe-C-----CeEEEEeCCCC
Q 047260 641 QP-RIGQLLAAASD------KVVSIFDIETDRQTHSLQGH--AELVNYICWDTNGDYLASVS-Q-----NLVKVWSMASG 705 (784)
Q Consensus 641 sp-~~~~Ll~~s~D------g~I~IwDl~t~~~i~~l~~h--~~~V~sl~~spdg~~Lasgs-d-----d~I~IwDl~t~ 705 (784)
+| ++..|+.++.+ ..|.+||+..++.. .+..+ ...+..++|+|+|++|+..+ + ..|++||+.++
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 99 77777776653 46899998765433 33323 23578899999999776654 2 23999999988
Q ss_pred ceEEEeccCCCceEEEEEec-CCCEEEEEE----------------CCCeEEEEECCCCceEEecccCC-----------
Q 047260 706 ECIQELSSNGNQFHSCVFHP-SYSTLLVVG----------------GISSLELWNMAENKSMTIAAHEN----------- 757 (784)
Q Consensus 706 ~~i~~l~~~~~~I~sl~fsp-dg~~L~s~s----------------~dg~I~Iwdl~~~~~~~~~~h~~----------- 757 (784)
+........ ... +.|+| +++++++++ .+..|++||+.+++...+..+..
T Consensus 275 ~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 351 (396)
T 3c5m_A 275 ENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQI 351 (396)
T ss_dssp CEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSST
T ss_pred CeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccC
Confidence 654433222 123 89999 999888765 24689999999887766666654
Q ss_pred ceEEEEEeCCCCEEEEEEC-CCcEEEe
Q 047260 758 IISALAQSPVTGMVASASH-DSSVKLW 783 (784)
Q Consensus 758 ~V~slafspdg~~LaSgs~-DG~V~IW 783 (784)
.+..++|+||++.|+.++. ++...||
T Consensus 352 ~~~~~~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 352 THPHPSFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp TCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred CCCCceEccCCCeEEEEecCCCCceEE
Confidence 2567899999998887765 5666665
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=1.4e-17 Score=182.51 Aligned_cols=262 Identities=8% Similarity=0.058 Sum_probs=182.6
Q ss_pred EEEEEeCC--CeEEEEEC--CCCceeee--cC-CCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCC-CCcceeeecc-CC
Q 047260 521 LLASSGHD--RKVVLWNM--DTLQTEST--PE-DHKSVVTDVRFRPNSSQLATASVDKSVRLWDAA-NPNFCSQAYT-GH 591 (784)
Q Consensus 521 ~Lasgs~D--g~I~IWd~--~t~~~~~~--l~-~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~-~~~~~~~~~~-~h 591 (784)
+|++|+.. +.|.+|++ .+++.... .. .....+..++|+|++++|++++.+ .|.+||+. +++ ...... ..
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~-~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTE-IVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTE-EEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCC-EEEeeEeec
Confidence 35556543 46777765 45544222 11 234568899999999999999988 99999997 554 222211 01
Q ss_pred CCCeEEEEEcCCCCcE-EEEEe-------------CCCeEEEEeCCC-CeeEE---e----ecCCeeEEEEecCCCEEEE
Q 047260 592 SSPIMSLDFHPKKTDL-FCFCD-------------NDNEIQYWSINP-FLCTH---I----TKGGTAQVRFQPRIGQLLA 649 (784)
Q Consensus 592 ~~~V~sl~~sp~~~~l-l~sgs-------------~dg~I~iwDl~~-~~~~~---~----~~~~v~~v~fsp~~~~Ll~ 649 (784)
.+.+.+++|+|++..+ +++++ .++.+.+|+++. ++... . ....+..++|+|+++++++
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 1235678999999863 44443 689999999973 43322 1 1356889999999999888
Q ss_pred EEC-CCcEEEEECC-CCeEE--EEEe--CCCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCC--CCceE---EEecc---
Q 047260 650 AAS-DKVVSIFDIE-TDRQT--HSLQ--GHAELVNYICWDTNGDYLASVSQ--NLVKVWSMA--SGECI---QELSS--- 713 (784)
Q Consensus 650 ~s~-Dg~I~IwDl~-t~~~i--~~l~--~h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~--t~~~i---~~l~~--- 713 (784)
+.. ++.|++||+. +++.. ..+. .|...+..++|+|+|++|+++++ +.|.+|++. +++.. ..+..
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 775 6899999998 67543 3343 24567899999999999888774 489998765 56543 22221
Q ss_pred C----CC------ceEEEE-EecCCCEEEEEECC-C-----eEEEEECC-CCceEE----ecccCCceEEEEEeC---CC
Q 047260 714 N----GN------QFHSCV-FHPSYSTLLVVGGI-S-----SLELWNMA-ENKSMT----IAAHENIISALAQSP---VT 768 (784)
Q Consensus 714 ~----~~------~I~sl~-fspdg~~L~s~s~d-g-----~I~Iwdl~-~~~~~~----~~~h~~~V~slafsp---dg 768 (784)
. .. .+..++ |+|++++|+++..+ + .|.+|++. +++... ...+...+..++|+| |+
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC
Confidence 1 11 478899 99999998877643 2 89999996 555442 223555677899999 89
Q ss_pred CEEEEEECC-CcEEEeC
Q 047260 769 GMVASASHD-SSVKLWK 784 (784)
Q Consensus 769 ~~LaSgs~D-G~V~IWd 784 (784)
++|++++.+ +.|.||+
T Consensus 322 ~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYR 338 (365)
T ss_dssp TEEEEECSSSCEEEEEE
T ss_pred CEEEEEEcCCCeEEEEE
Confidence 999999864 8999995
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=3.3e-18 Score=199.30 Aligned_cols=229 Identities=9% Similarity=0.030 Sum_probs=175.8
Q ss_pred CCCeEEEEEccCCCEEEEEeC-CCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeC---CCeEEEE--eC
Q 047260 549 KSVVTDVRFRPNSSQLATASV-DKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDN---DNEIQYW--SI 622 (784)
Q Consensus 549 ~~~It~i~fspdg~~Latgs~-Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~---dg~I~iw--Dl 622 (784)
..+|.+++|+|||+.||+++. ||+++||+++++. .......+...+..+.|+|+ .++++++. +....+| +.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-TVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-EEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCC-cEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 467999999999999999887 9999999996544 43433333368999999998 47776664 4444554 44
Q ss_pred --CCCeeEEeecCCeeEEEEecCCCE-EEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe-C----
Q 047260 623 --NPFLCTHITKGGTAQVRFQPRIGQ-LLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS-Q---- 694 (784)
Q Consensus 623 --~~~~~~~~~~~~v~~v~fsp~~~~-Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs-d---- 694 (784)
................+|+|+++. +++.+.++.+.+||+.+++.......+. .+++|+|||++|++++ +
T Consensus 98 ~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 98 SRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp TSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTE
T ss_pred cCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCC
Confidence 332221112234557789999865 4455556667799999887665554333 7899999999999765 3
Q ss_pred CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCC--eEEEEECCCCceEEecccCCceEEEE--------E
Q 047260 695 NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGIS--SLELWNMAENKSMTIAAHENIISALA--------Q 764 (784)
Q Consensus 695 d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg--~I~Iwdl~~~~~~~~~~h~~~V~sla--------f 764 (784)
..|++||+.+++.. .+..+...+..++|+|||+.|+++..++ .|++||+.+++...+..|...+..++ |
T Consensus 175 ~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3o4h_A 175 VSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGY 253 (582)
T ss_dssp EEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEE
T ss_pred eEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeE
Confidence 37999999988765 6677888899999999999999888888 89999999988776667777777777 9
Q ss_pred eCCCCEEEEEECCCcEEEeC
Q 047260 765 SPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 765 spdg~~LaSgs~DG~V~IWd 784 (784)
+|||.++++++.||.++||+
T Consensus 254 spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 254 LPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp CTTSCEEEEEEETTEEEEEE
T ss_pred cCCCcEEEEEEcCCcEEEEE
Confidence 99999999999999999995
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=5.8e-17 Score=177.64 Aligned_cols=241 Identities=13% Similarity=0.133 Sum_probs=174.0
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEECC-CCceeeecCC-CCCCeEEEEEccCCCE--EEEEe-------------
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHDRKVVLWNMD-TLQTESTPED-HKSVVTDVRFRPNSSQ--LATAS------------- 568 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~-t~~~~~~l~~-h~~~It~i~fspdg~~--Latgs------------- 568 (784)
+...+..++|+|||++|++++.+ .|.+|++. +++....... ..+.+.+++|+|++++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 34568899999999999998888 99999997 7766543321 1123667899999994 45553
Q ss_pred CCCeEEEEcCCCCcceeeecc----CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCC-CCeeE--Eee-----cCCee
Q 047260 569 VDKSVRLWDAANPNFCSQAYT----GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSIN-PFLCT--HIT-----KGGTA 636 (784)
Q Consensus 569 ~Dg~I~IWdl~~~~~~~~~~~----~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~-~~~~~--~~~-----~~~v~ 636 (784)
.++.+.+|++.........+. .+...+.+++|+|++..++++...++.|++||++ +++.. ... ...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 689999999974222322222 2456799999999998666555557899999998 55432 222 24578
Q ss_pred EEEEecCCCEEEEEEC-CCcEEEEECC--CCeEE---EEEeC-------CCC------CEEEEE-EcCCCCEEEEEe--C
Q 047260 637 QVRFQPRIGQLLAAAS-DKVVSIFDIE--TDRQT---HSLQG-------HAE------LVNYIC-WDTNGDYLASVS--Q 694 (784)
Q Consensus 637 ~v~fsp~~~~Ll~~s~-Dg~I~IwDl~--t~~~i---~~l~~-------h~~------~V~sl~-~spdg~~Lasgs--d 694 (784)
.++|+|+++++++++. ++.|.+|++. +++.. ..+.. |.. .+..++ |+|||++|+++. .
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 8999999999988886 6899999865 45542 22221 121 588999 999999887765 3
Q ss_pred C-----eEEEEeCC-CCceEE---EeccCCCceEEEEEec---CCCEEEEEECC-CeEEEEECCCC
Q 047260 695 N-----LVKVWSMA-SGECIQ---ELSSNGNQFHSCVFHP---SYSTLLVVGGI-SSLELWNMAEN 747 (784)
Q Consensus 695 d-----~I~IwDl~-t~~~i~---~l~~~~~~I~sl~fsp---dg~~L~s~s~d-g~I~Iwdl~~~ 747 (784)
+ .|.+|++. +++... .+..+...+..++|+| ++++|++++.+ +.|.+|++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 4 89999996 566443 2333445567889999 89999999875 89999998776
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=2.5e-17 Score=176.93 Aligned_cols=268 Identities=10% Similarity=0.056 Sum_probs=183.4
Q ss_pred CCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCC-CceEEEEEcCCCCEEE-EEeC
Q 047260 450 IDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRN-SKVTCCHFSSDGKLLA-SSGH 527 (784)
Q Consensus 450 ~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~-~~V~~l~fspdg~~La-sgs~ 527 (784)
..+++.+++.++.|.+|+..... .+..+..+. ..+..++|+|+|++++ ++..
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~--------------------------~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~ 63 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDT--------------------------VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 63 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTE--------------------------EEEEEECSSCCSSCEEEECTTSSEEEEEETT
T ss_pred CCEEEEEeCCCCeEEEEECCCCc--------------------------EEEEEecCCCCCCceeEECCCCCEEEEEeCC
Confidence 44556677788999999763221 122222222 2578899999998665 4557
Q ss_pred CCeEEEEECCCCceeeecCCCC------CCeEEEEEccCCCEEEEEeCC------------CeEEEEcCCCCcce--eee
Q 047260 528 DRKVVLWNMDTLQTESTPEDHK------SVVTDVRFRPNSSQLATASVD------------KSVRLWDAANPNFC--SQA 587 (784)
Q Consensus 528 Dg~I~IWd~~t~~~~~~l~~h~------~~It~i~fspdg~~Latgs~D------------g~I~IWdl~~~~~~--~~~ 587 (784)
++.|.+||+.+++.+..+..+. ..+.+++|+|++++|++++.+ +.|.+||+.+++.. ...
T Consensus 64 ~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 143 (349)
T 1jmx_B 64 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT 143 (349)
T ss_dssp TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE
T ss_pred CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee
Confidence 8999999999998877765332 337899999999999999865 89999999874421 122
Q ss_pred ccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCC---------------------------eeEEEE
Q 047260 588 YTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGG---------------------------TAQVRF 640 (784)
Q Consensus 588 ~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~---------------------------v~~v~f 640 (784)
+ .+...+.+++|+|++. +++ + ++.|++||+.+.+.+..+... ...+.+
T Consensus 144 ~-~~~~~~~~~~~s~dg~-l~~-~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T 1jmx_B 144 F-PMPRQVYLMRAADDGS-LYV-A--GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIAR 218 (349)
T ss_dssp E-ECCSSCCCEEECTTSC-EEE-E--SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEE
T ss_pred c-cCCCcccceeECCCCc-EEE-c--cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeee
Confidence 2 2344688999999998 655 3 344999999987766554421 223444
Q ss_pred ecCCCEEEEEE-CCCcEEEEECCCCeE-EEEEeCCCCCEEEEEEcC-CCCEEEEEeCCeEEEEeCCCCceEEEeccCCCc
Q 047260 641 QPRIGQLLAAA-SDKVVSIFDIETDRQ-THSLQGHAELVNYICWDT-NGDYLASVSQNLVKVWSMASGECIQELSSNGNQ 717 (784)
Q Consensus 641 sp~~~~Ll~~s-~Dg~I~IwDl~t~~~-i~~l~~h~~~V~sl~~sp-dg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~ 717 (784)
++++....... ....+..+|..+++. ...+..+...+..++|+| ++++++++ ++.|.+||+.+++.+..+... ..
T Consensus 219 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~-~~ 296 (349)
T 1jmx_B 219 FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLD-HT 296 (349)
T ss_dssp C-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECS-SC
T ss_pred cCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCC-CC
Confidence 44331110000 001122244444432 112233566789999999 99999988 779999999999988887643 45
Q ss_pred eEEEEEecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 718 FHSCVFHPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 718 I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
+.+++|+|++++|++++.++.|.+||+.+++.+
T Consensus 297 ~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 297 YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp CCEEEECSSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred ccceEECCCCCEEEEecCCCeEEEEecccccee
Confidence 789999999999999888899999999998776
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=1.3e-17 Score=200.59 Aligned_cols=262 Identities=11% Similarity=0.117 Sum_probs=192.1
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCC-----eEEEEEccCCCEEEEEeCC---------CeE
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSV-----VTDVRFRPNSSQLATASVD---------KSV 573 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~-----It~i~fspdg~~Latgs~D---------g~I 573 (784)
....++.|+|||.+|+++ |+.|++||+.+++....+..|... ...+.|+|||++|++++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 346689999999999886 999999999999988777777643 2448899999999999876 566
Q ss_pred EEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCC-------------------
Q 047260 574 RLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGG------------------- 634 (784)
Q Consensus 574 ~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~------------------- 634 (784)
.+||+.+++ ...+..|...+..++|+|||..++++ .++.|++||+.++.........
T Consensus 95 ~~~d~~~~~--~~~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 95 DIYDLNKRQ--LITEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEETTTTE--ECCSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEECCCCc--EEEcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 799999876 33456677889999999999966554 3789999999876655433211
Q ss_pred --eeEEEEecCCCEEEEEECCC------------------------------------cEEEEECCC---Ce--EEEEEe
Q 047260 635 --TAQVRFQPRIGQLLAAASDK------------------------------------VVSIFDIET---DR--QTHSLQ 671 (784)
Q Consensus 635 --v~~v~fsp~~~~Ll~~s~Dg------------------------------------~I~IwDl~t---~~--~i~~l~ 671 (784)
...+.|+|||+.|+.+..|. .|++||+.+ ++ ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 12488999999998875321 588899988 73 223343
Q ss_pred ------CCCCCEEEEEEcCCCCEEEEEe---CC--eEEEEeCCCCc----eE--EEe--ccCCCceE-----EEEEecCC
Q 047260 672 ------GHAELVNYICWDTNGDYLASVS---QN--LVKVWSMASGE----CI--QEL--SSNGNQFH-----SCVFHPSY 727 (784)
Q Consensus 672 ------~h~~~V~sl~~spdg~~Lasgs---dd--~I~IwDl~t~~----~i--~~l--~~~~~~I~-----sl~fspdg 727 (784)
+|...+..++|+|||++++... .+ .|++||+.+++ |. ..+ ..+...|. ..+|+|||
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 3777899999999999766553 12 79999999887 32 122 33444444 78999999
Q ss_pred CEEE-EEECC-C--eEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEEC
Q 047260 728 STLL-VVGGI-S--SLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASH 776 (784)
Q Consensus 728 ~~L~-s~s~d-g--~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~ 776 (784)
+.|+ ..+.. | .|++||+.++....+......|..+.+ +|++.|+..+.
T Consensus 331 ~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~-~d~~~i~f~~~ 382 (740)
T 4a5s_A 331 NSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEA-LTSDYLYYISN 382 (740)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEE-ECSSEEEEEES
T ss_pred CEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEE-EeCCEEEEEEe
Confidence 9877 66543 3 799999998888777766666766543 44665554443
No 165
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=1.3e-17 Score=187.87 Aligned_cols=210 Identities=12% Similarity=0.183 Sum_probs=159.7
Q ss_pred CeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCC----------ccee----eeccCCCCC
Q 047260 529 RKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANP----------NFCS----QAYTGHSSP 594 (784)
Q Consensus 529 g~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~----------~~~~----~~~~~h~~~ 594 (784)
+.|++|+... . .....++.+++++++.+|++++.|+ |+||+.... .... .....+...
T Consensus 23 ~~vri~~~~~-~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-E------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-S------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-c------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 4688876531 1 1344688999999999999999888 888865310 0000 011235678
Q ss_pred eEEEEEcCCCCcEEE---EEeCCCeEEEEeCCCC--------e---eEEe---ecCCeeEEEEecC-CCEEEEEECCCcE
Q 047260 595 IMSLDFHPKKTDLFC---FCDNDNEIQYWSINPF--------L---CTHI---TKGGTAQVRFQPR-IGQLLAAASDKVV 656 (784)
Q Consensus 595 V~sl~~sp~~~~ll~---sgs~dg~I~iwDl~~~--------~---~~~~---~~~~v~~v~fsp~-~~~Ll~~s~Dg~I 656 (784)
|.+++|+|++..+++ +++.|+.|++||+++. + .+.. +...+.+++|+|+ +..|++++.||.|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 999999999986655 7788999999998643 1 1232 3578999999998 7889999999999
Q ss_pred EEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCC-------CceEEEEEecCCC
Q 047260 657 SIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNG-------NQFHSCVFHPSYS 728 (784)
Q Consensus 657 ~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~-------~~I~sl~fspdg~ 728 (784)
++||++++..+....+|...|.+++|+|+|++|++++.+ .|++||++ ++....+..+. ..|.++.|++++.
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~ 253 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYV 253 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTE
T ss_pred EEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCce
Confidence 999999998777777889999999999999999999965 99999998 66666665432 2789999999887
Q ss_pred EEEEEE-CCC------eEEEEECCCC
Q 047260 729 TLLVVG-GIS------SLELWNMAEN 747 (784)
Q Consensus 729 ~L~s~s-~dg------~I~Iwdl~~~ 747 (784)
++++.+ .+| .+++|++...
T Consensus 254 ~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 254 FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEccCCCccCCCCceEEEEeccC
Confidence 765543 343 3899999865
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=1.4e-16 Score=188.16 Aligned_cols=279 Identities=12% Similarity=0.097 Sum_probs=198.5
Q ss_pred EeecCCCceEEEEEcCCCCEEEEE--eCCCeEEEEECCCCceeeecCCCCCCeE---------EEEEc--cCCCE-EEEE
Q 047260 502 CIRSRNSKVTCCHFSSDGKLLASS--GHDRKVVLWNMDTLQTESTPEDHKSVVT---------DVRFR--PNSSQ-LATA 567 (784)
Q Consensus 502 ~l~~H~~~V~~l~fspdg~~Lasg--s~Dg~I~IWd~~t~~~~~~l~~h~~~It---------~i~fs--pdg~~-Latg 567 (784)
.+.+|...|..++|++++-++++. +.++...||....+.....+..|...+. ...|+ ||++. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 356789999999999887666766 5588999999655555667777776666 66676 99998 7766
Q ss_pred eC-CCeEEEEcCC--C-CcceeeeccC-----CCCCeEEEEEcCCCCcEEEEEeCC---------CeEEEEeCCC-----
Q 047260 568 SV-DKSVRLWDAA--N-PNFCSQAYTG-----HSSPIMSLDFHPKKTDLFCFCDND---------NEIQYWSINP----- 624 (784)
Q Consensus 568 s~-Dg~I~IWdl~--~-~~~~~~~~~~-----h~~~V~sl~~sp~~~~ll~sgs~d---------g~I~iwDl~~----- 624 (784)
+. +..|.+|++. . +. ...+.. |...+.+++|+|++..++++.... ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~--~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV--PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC--CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred ECCCCeEEEEcCCCCCCCC--CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 54 5667777775 2 33 233333 567789999999998666555421 5899999987
Q ss_pred -CeeEEee-c--CCeeEEEEecCCCEEEEEECC--------CcEEEEECC-CC---eEEEEEeCCCCCEEEEEEcCCCCE
Q 047260 625 -FLCTHIT-K--GGTAQVRFQPRIGQLLAAASD--------KVVSIFDIE-TD---RQTHSLQGHAELVNYICWDTNGDY 688 (784)
Q Consensus 625 -~~~~~~~-~--~~v~~v~fsp~~~~Ll~~s~D--------g~I~IwDl~-t~---~~i~~l~~h~~~V~sl~~spdg~~ 688 (784)
....... . ..+..++|+|+|++|+.++.+ ..|++||+. ++ +.......+...+..++|+|||++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 5554444 3 445678899999999888754 379999999 56 444444556788999999999997
Q ss_pred EEEEeCC---eEEEEeCCCCceEEEeccCCCc--------eEEEEEecCCCEEEEEECCCeEEEE--ECCCCceEEeccc
Q 047260 689 LASVSQN---LVKVWSMASGECIQELSSNGNQ--------FHSCVFHPSYSTLLVVGGISSLELW--NMAENKSMTIAAH 755 (784)
Q Consensus 689 Lasgsdd---~I~IwDl~t~~~i~~l~~~~~~--------I~sl~fspdg~~L~s~s~dg~I~Iw--dl~~~~~~~~~~h 755 (784)
++++..+ .|.+||+.+++.......+... +..++|+|++..++++.. +.++|| |+.+++...+..|
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~ 334 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGP 334 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSS
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCC
Confidence 7776643 6788887777654433322221 467899999999999888 988888 6667776677778
Q ss_pred CCceEEE-EEeCCCCEEEEEECCCcEEEe
Q 047260 756 ENIISAL-AQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 756 ~~~V~sl-afspdg~~LaSgs~DG~V~IW 783 (784)
...+..+ +++.+.-++++++.+....||
T Consensus 335 ~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 335 WTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 8888877 554433344555666555555
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=3.3e-16 Score=172.01 Aligned_cols=260 Identities=11% Similarity=0.079 Sum_probs=191.6
Q ss_pred EeecCCCceEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCceeeecCCC------CCCeEEEEEccCCCEEE
Q 047260 502 CIRSRNSKVTCCHFSSDGKLLASSGH----------DRKVVLWNMDTLQTESTPEDH------KSVVTDVRFRPNSSQLA 565 (784)
Q Consensus 502 ~l~~H~~~V~~l~fspdg~~Lasgs~----------Dg~I~IWd~~t~~~~~~l~~h------~~~It~i~fspdg~~La 565 (784)
.+..+..+ .++|+|||++|+++.. ++.|.+||..+++.+..+... ......++|+|+|++|+
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 34444444 8999999999998863 678999999999888777532 34567899999999999
Q ss_pred EEeC--CCeEEEEcCCCCcceeee-ccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-CeeEEe------ec--C
Q 047260 566 TASV--DKSVRLWDAANPNFCSQA-YTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP-FLCTHI------TK--G 633 (784)
Q Consensus 566 tgs~--Dg~I~IWdl~~~~~~~~~-~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~-~~~~~~------~~--~ 633 (784)
++.. +++|.+||+.+.+ .... +.. .....+.+.|++...+++.+.||.+.+|++.. .+.... +. .
T Consensus 124 v~n~~~~~~v~v~d~~~~~-~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~ 200 (361)
T 2oiz_A 124 LQNASPATSIGIVDVAKGD-YVEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKD 200 (361)
T ss_dssp EEEESSSEEEEEEETTTTE-EEEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTT
T ss_pred EECCCCCCeEEEEECCCCc-EEEEEecC--CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCC
Confidence 9874 5899999999876 3333 332 12234667888767888888999999999864 333311 11 1
Q ss_pred CeeEEEEecCCCEEEEEECCCcEEEEECCCCe--EEEEEeCC------C----CCEEEEEEcCCCCEEEEEeC-------
Q 047260 634 GTAQVRFQPRIGQLLAAASDKVVSIFDIETDR--QTHSLQGH------A----ELVNYICWDTNGDYLASVSQ------- 694 (784)
Q Consensus 634 ~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~--~i~~l~~h------~----~~V~sl~~spdg~~Lasgsd------- 694 (784)
....+.+.+++..++..+.++.|.++|+.... .+..+... . .....++|+|++..++++..
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~ 280 (361)
T 2oiz_A 201 DPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT 280 (361)
T ss_dssp SCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTC
T ss_pred CceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccc
Confidence 11223346777788888889999999987553 22222211 0 11112689999887776532
Q ss_pred -----CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCC--ceEEe-cccCCceEEEEEeC
Q 047260 695 -----NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAEN--KSMTI-AAHENIISALAQSP 766 (784)
Q Consensus 695 -----d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~--~~~~~-~~h~~~V~slafsp 766 (784)
+.|.+||+.+++.+.++..+. +..++|+|++++|++++. +.|.+||..++ +.+.. ..+......++++|
T Consensus 281 ~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 281 HKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp TTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECC
T ss_pred ccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecC
Confidence 389999999999999998876 899999999999998887 99999999999 87744 57778889999999
Q ss_pred CCC
Q 047260 767 VTG 769 (784)
Q Consensus 767 dg~ 769 (784)
+|+
T Consensus 358 ~G~ 360 (361)
T 2oiz_A 358 VGG 360 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 985
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=9.3e-16 Score=184.31 Aligned_cols=262 Identities=13% Similarity=0.092 Sum_probs=179.4
Q ss_pred EEEEEcCCCCEEEEEeCC---------CeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCC
Q 047260 511 TCCHFSSDGKLLASSGHD---------RKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANP 581 (784)
Q Consensus 511 ~~l~fspdg~~Lasgs~D---------g~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~ 581 (784)
..+.|||||++|+.++.+ +.+.+||+.+++.. .+..|...+..++|+|||+.||.+. |+.|++||+.++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC
Confidence 458899999999998876 56779999988764 4667888999999999999999984 689999999887
Q ss_pred cceeeeccCCCCCe-----------------EEEEEcCCCCcEEEEEeCCC-----------------------------
Q 047260 582 NFCSQAYTGHSSPI-----------------MSLDFHPKKTDLFCFCDNDN----------------------------- 615 (784)
Q Consensus 582 ~~~~~~~~~h~~~V-----------------~sl~~sp~~~~ll~sgs~dg----------------------------- 615 (784)
.....+..++...+ ..+.|+|||..+++...+++
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 64333333433323 35899999997666543222
Q ss_pred ------eEEEEeCCC---C---eeEEee--------cCCeeEEEEecCCCEEEEEEC----CCcEEEEECCCCe----EE
Q 047260 616 ------EIQYWSINP---F---LCTHIT--------KGGTAQVRFQPRIGQLLAAAS----DKVVSIFDIETDR----QT 667 (784)
Q Consensus 616 ------~I~iwDl~~---~---~~~~~~--------~~~v~~v~fsp~~~~Ll~~s~----Dg~I~IwDl~t~~----~i 667 (784)
.|++||+.+ . ...... ...+..++|+|+++.++.... +..|.+||+.+++ +.
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~ 302 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL 302 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee
Confidence 588899987 6 333332 234678899999986665543 2479999998876 21
Q ss_pred --EEE--eCCCCCEE-----EEEEcCCCCEEE-EEeC--C--eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEE
Q 047260 668 --HSL--QGHAELVN-----YICWDTNGDYLA-SVSQ--N--LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVV 733 (784)
Q Consensus 668 --~~l--~~h~~~V~-----sl~~spdg~~La-sgsd--d--~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~ 733 (784)
..+ ..|...|. .+.|+|||+.|+ ..++ + .|++||+.++++. .+......+..+.. ++++.|+..
T Consensus 303 ~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~ 380 (740)
T 4a5s_A 303 VARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYI 380 (740)
T ss_dssp GGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEE
T ss_pred EEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEE
Confidence 112 34555444 788999999876 6652 3 8999999877654 44444455555543 446666666
Q ss_pred ECC-----C--eEEEEECCCCceE-Eecc----cCCceEEEEEeCCCCEEEEEEC
Q 047260 734 GGI-----S--SLELWNMAENKSM-TIAA----HENIISALAQSPVTGMVASASH 776 (784)
Q Consensus 734 s~d-----g--~I~Iwdl~~~~~~-~~~~----h~~~V~slafspdg~~LaSgs~ 776 (784)
+.. + .|+..++..+... .+.. ....+..+.|+|++++++....
T Consensus 381 ~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s 435 (740)
T 4a5s_A 381 SNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCS 435 (740)
T ss_dssp ESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEEC
T ss_pred EecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeC
Confidence 554 2 4555566554433 2321 2356889999999997765543
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=1.6e-15 Score=163.94 Aligned_cols=238 Identities=13% Similarity=0.092 Sum_probs=182.4
Q ss_pred CCceEEEEEcCCCCEEEEEeCC------------------------CeEEEEECCCCceeeecC-CCCCCeEEEEEccCC
Q 047260 507 NSKVTCCHFSSDGKLLASSGHD------------------------RKVVLWNMDTLQTESTPE-DHKSVVTDVRFRPNS 561 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~D------------------------g~I~IWd~~t~~~~~~l~-~h~~~It~i~fspdg 561 (784)
-+.|.+++++++|+++++...+ +.|.+||..+++.+..+. .+-.....|++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3569999999999999888777 479999999888877664 445678999999999
Q ss_pred CEEEEEeCCCeEEEEcCCCCcceeeec---------cCCCCCeEEEEEcCCCCcEEEEEe-CCCeEEEEeCCCCeeEEee
Q 047260 562 SQLATASVDKSVRLWDAANPNFCSQAY---------TGHSSPIMSLDFHPKKTDLFCFCD-NDNEIQYWSINPFLCTHIT 631 (784)
Q Consensus 562 ~~Latgs~Dg~I~IWdl~~~~~~~~~~---------~~h~~~V~sl~~sp~~~~ll~sgs-~dg~I~iwDl~~~~~~~~~ 631 (784)
+++++...++.|++||..........+ .++...+..|+++|++..++++.+ .++.|++||.+ +..+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEEEEe
Confidence 988888889999999987542123333 244557899999995455777775 69999999954 4444333
Q ss_pred c-------------CCeeEEEEecCCCEEEEEE-CCCcEEEEECCCCeEEEEEe--CCCCCEEEEEEcCCCCEEEEEe--
Q 047260 632 K-------------GGTAQVRFQPRIGQLLAAA-SDKVVSIFDIETDRQTHSLQ--GHAELVNYICWDTNGDYLASVS-- 693 (784)
Q Consensus 632 ~-------------~~v~~v~fsp~~~~Ll~~s-~Dg~I~IwDl~t~~~i~~l~--~h~~~V~sl~~spdg~~Lasgs-- 693 (784)
. .....++++|+++.|+++. .++.|++||..+++.+..+. .+...+..++|+| +..+++.+
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 2 2267899999955555555 57899999999898888874 3566889999999 43333322
Q ss_pred -----CC-eEEEEeCCCCceEEEec---cCCCceEEEEEecCCCEEEEEECCCeEEEEECCC
Q 047260 694 -----QN-LVKVWSMASGECIQELS---SNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 694 -----dd-~I~IwDl~t~~~i~~l~---~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~ 746 (784)
.+ .|++||+.+++.+..+. .+...+..++++|++..+++...++.|++|++..
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 22 89999999999998884 5566789999999997667777788999999764
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.73 E-value=1.3e-15 Score=164.35 Aligned_cols=253 Identities=11% Similarity=0.129 Sum_probs=178.3
Q ss_pred CceEEEEEcCCCCEEEEEe---------CCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCC---C--eE
Q 047260 508 SKVTCCHFSSDGKLLASSG---------HDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVD---K--SV 573 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs---------~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~D---g--~I 573 (784)
..|..+.| ||++|+... .++.|.+||+.+++... + ..+.+++|+|||++|+.++.+ + .|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 34677777 888887642 25679999999876543 3 568899999999999988754 3 37
Q ss_pred EEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeC--------------------------CCeEEEEeCCCCee
Q 047260 574 RLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDN--------------------------DNEIQYWSINPFLC 627 (784)
Q Consensus 574 ~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~--------------------------dg~I~iwDl~~~~~ 627 (784)
.+||+.+++ ....... .. +..+.|+|++..+++++.. ...|++||+.+.+.
T Consensus 88 ~~~~~~~g~-~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 88 WVADLETLS-SKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEETTTTE-EEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred EEEECCCCc-eEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 788887755 3333322 33 9999999999877766543 35799999987765
Q ss_pred -EEe-ecCCeeEEEEecCCCEEEEEECCC-------cEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC----
Q 047260 628 -THI-TKGGTAQVRFQPRIGQLLAAASDK-------VVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ---- 694 (784)
Q Consensus 628 -~~~-~~~~v~~v~fsp~~~~Ll~~s~Dg-------~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd---- 694 (784)
... .. .+..+.|+|++ .++++..+. ...||.+.+++. ..+..+ ..+..+ +|+|++|+.++.
T Consensus 165 ~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 165 IEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKK 238 (347)
T ss_dssp EEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSS
T ss_pred EeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccC
Confidence 211 13 77889999999 766665542 334444435543 334334 455544 899998877662
Q ss_pred -----CeEEEEeCCCCceEEEeccCCCceEE-EEEecCCCEEEEEECCCeEEEEECCCCceEEecccCCceEEEEEeCCC
Q 047260 695 -----NLVKVWSMASGECIQELSSNGNQFHS-CVFHPSYSTLLVVGGISSLELWNMAENKSMTIAAHENIISALAQSPVT 768 (784)
Q Consensus 695 -----d~I~IwDl~t~~~i~~l~~~~~~I~s-l~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg 768 (784)
..|.+|| +++.......+...+.. +.|+ ++ .+++++.++.++|| +.+++...+..+...|.+++|++
T Consensus 239 ~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~-- 311 (347)
T 2gop_A 239 YMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE-- 311 (347)
T ss_dssp CCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--
T ss_pred CccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--
Confidence 2688888 55554444455667776 8999 88 88888899999999 87666666666788899999999
Q ss_pred CEEEEEECCCcE-EEe
Q 047260 769 GMVASASHDSSV-KLW 783 (784)
Q Consensus 769 ~~LaSgs~DG~V-~IW 783 (784)
.++++++.++.. .||
T Consensus 312 ~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 312 IVVYLKETATRLRELF 327 (347)
T ss_dssp SEEEEEECSSSCCEEE
T ss_pred cEEEEEcCCCChHHhe
Confidence 688888777654 555
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.72 E-value=1.3e-15 Score=167.29 Aligned_cols=260 Identities=10% Similarity=0.079 Sum_probs=185.0
Q ss_pred CCCEEEEEe------CCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeC----------CCeEEEEcCCCC
Q 047260 518 DGKLLASSG------HDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASV----------DKSVRLWDAANP 581 (784)
Q Consensus 518 dg~~Lasgs------~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~----------Dg~I~IWdl~~~ 581 (784)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+|++++|++++. ++.|.+||+.+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 556665543 3679999999999998888776555 8999999999999873 678999999876
Q ss_pred cceeeecc-C-----CCCCeEEEEEcCCCCcEEEEEeC-CCeEEEEeCCCCeeEEe-ec-CCeeEEEEecCC-CEEEEEE
Q 047260 582 NFCSQAYT-G-----HSSPIMSLDFHPKKTDLFCFCDN-DNEIQYWSINPFLCTHI-TK-GGTAQVRFQPRI-GQLLAAA 651 (784)
Q Consensus 582 ~~~~~~~~-~-----h~~~V~sl~~sp~~~~ll~sgs~-dg~I~iwDl~~~~~~~~-~~-~~v~~v~fsp~~-~~Ll~~s 651 (784)
+. ...+. . +......++|+|++++++++... ++.|.+||+.+.+.+.. +. .....+.+.|++ ..+++.+
T Consensus 92 ~~-~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 92 TF-EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CE-EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEE
T ss_pred cE-EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEEC
Confidence 63 33322 1 23456789999999977777654 78999999999888766 54 233335677776 5677888
Q ss_pred CCCcEEEEECCC-CeEEEEE------eCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCc--eEEEeccCC------
Q 047260 652 SDKVVSIFDIET-DRQTHSL------QGHAELVNYICWDTNGDYLASVS-QNLVKVWSMASGE--CIQELSSNG------ 715 (784)
Q Consensus 652 ~Dg~I~IwDl~t-~~~i~~l------~~h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~--~i~~l~~~~------ 715 (784)
.||.+.+|++.. ++..... ..+..++ .+.+++++..++..+ ++.|.++|+.... .+..+....
T Consensus 171 ~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
T 2oiz_A 171 GDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAK 249 (361)
T ss_dssp TTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHT
T ss_pred CCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccc
Confidence 899999999875 5544221 1122222 233456676666555 4499999997653 222222110
Q ss_pred ----CceEEEEEecCCCEEEEEEC-----------CCeEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEEECCCc
Q 047260 716 ----NQFHSCVFHPSYSTLLVVGG-----------ISSLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASASHDSS 779 (784)
Q Consensus 716 ----~~I~sl~fspdg~~L~s~s~-----------dg~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~ 779 (784)
.....++|+|+++.++++.. .+.|.+||+.+++.+ .+..+. +.+++|+||+++|++++. +.
T Consensus 250 ~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~ 326 (361)
T 2oiz_A 250 NWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GN 326 (361)
T ss_dssp TCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SC
T ss_pred ccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-Ce
Confidence 11123789999988887754 348999999999887 444554 999999999999998887 99
Q ss_pred EEEeC
Q 047260 780 VKLWK 784 (784)
Q Consensus 780 V~IWd 784 (784)
|.|||
T Consensus 327 v~v~D 331 (361)
T 2oiz_A 327 VNVYD 331 (361)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99997
No 172
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=1.4e-14 Score=168.32 Aligned_cols=274 Identities=10% Similarity=0.035 Sum_probs=203.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEECC--CCceeeecCCCCCCeEEEEEc----cCCCEEEEEeC-CCeEEEEcCCCC
Q 047260 509 KVTCCHFSSDGKLLASSGHDRKVVLWNMD--TLQTESTPEDHKSVVTDVRFR----PNSSQLATASV-DKSVRLWDAANP 581 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~Dg~I~IWd~~--t~~~~~~l~~h~~~It~i~fs----pdg~~Latgs~-Dg~I~IWdl~~~ 581 (784)
.+.++.|+|||++|++++.|+.|.+||+. +++.+..+.... ....++|+ |||+++++++. ++.|.|+|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 46789999999999999999999999995 888888776533 46789999 69999888766 589999999887
Q ss_pred cceeeeccC---------CCC-CeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe--e--cCCeeEEEEecCCCEE
Q 047260 582 NFCSQAYTG---------HSS-PIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI--T--KGGTAQVRFQPRIGQL 647 (784)
Q Consensus 582 ~~~~~~~~~---------h~~-~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~--~--~~~v~~v~fsp~~~~L 647 (784)
+.......+ |.. .+..+.+++++..+++....+|.|.++|......... . ......+.|+|+++++
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~ 356 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF 356 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEE
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEE
Confidence 643222111 222 6788999998888888888889999999986532221 1 2355678999999999
Q ss_pred EEEEC-CCcEEEEECCCCeEEEEEeC-----CCCCEEEEEEcCCCC-EEEEEe--CCeEEEEeCCC-------CceEEEe
Q 047260 648 LAAAS-DKVVSIFDIETDRQTHSLQG-----HAELVNYICWDTNGD-YLASVS--QNLVKVWSMAS-------GECIQEL 711 (784)
Q Consensus 648 l~~s~-Dg~I~IwDl~t~~~i~~l~~-----h~~~V~sl~~spdg~-~Lasgs--dd~I~IwDl~t-------~~~i~~l 711 (784)
++++. ++.|.++|+.+++.+..+.. |.+.-..+ ++|++. ++++.. ++.|.++|..+ .+.+.++
T Consensus 357 ~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 357 ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEE
Confidence 88875 79999999999988777654 33222222 578744 444543 45999999988 6788888
Q ss_pred ccCCCceEEEEEecCCCEEEEEEC-------CCeEEEEECCCC-----ce--EEec--------ccCCceEEEEEeCCCC
Q 047260 712 SSNGNQFHSCVFHPSYSTLLVVGG-------ISSLELWNMAEN-----KS--MTIA--------AHENIISALAQSPVTG 769 (784)
Q Consensus 712 ~~~~~~I~sl~fspdg~~L~s~s~-------dg~I~Iwdl~~~-----~~--~~~~--------~h~~~V~slafspdg~ 769 (784)
......-..+.++|+++++++... .++|.+||+.+. .. ..+. .....+..+.|+++|+
T Consensus 436 ~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 515 (567)
T 1qks_A 436 PALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGT 515 (567)
T ss_dssp ECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSS
T ss_pred ecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCC
Confidence 765444456789999999998773 358999999876 21 1221 1245789999999999
Q ss_pred EEEEEEC-----CCcEEEeC
Q 047260 770 MVASASH-----DSSVKLWK 784 (784)
Q Consensus 770 ~LaSgs~-----DG~V~IWd 784 (784)
.+..+.. ++.|.|+|
T Consensus 516 ~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 516 EVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp EEEEEEECCTTSCCEEEEEE
T ss_pred EEEEEeecCCCCCCcEEEEE
Confidence 7776643 68888875
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=6.9e-15 Score=154.58 Aligned_cols=236 Identities=10% Similarity=0.123 Sum_probs=174.7
Q ss_pred cCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecC------CCCCCeEEEEEc-cCCCEEEEEeC-CCeEEEE
Q 047260 505 SRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPE------DHKSVVTDVRFR-PNSSQLATASV-DKSVRLW 576 (784)
Q Consensus 505 ~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~------~h~~~It~i~fs-pdg~~Latgs~-Dg~I~IW 576 (784)
+|-..+.+++++++++++++...++.|.+||.+ ++.+..+. .|...+.++++. +++.++++... ++.|++|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 355679999999999988888889999999987 55555553 244678999994 67766666543 8899999
Q ss_pred cCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec-----CCeeEEEEecCCCEEEEEE
Q 047260 577 DAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK-----GGTAQVRFQPRIGQLLAAA 651 (784)
Q Consensus 577 dl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~-----~~v~~v~fsp~~~~Ll~~s 651 (784)
|. +++........+...+.++++++++. ++++...++.|.+||.... .+..+. ..+..+++++++..+++..
T Consensus 106 d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 106 NQ-YGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGN-VLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp CT-TSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSC-EEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred CC-CCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCC-EEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 94 44433222233456789999999986 7777777899999997643 333321 3578899999987655556
Q ss_pred CCCcEEEEECCCCeEEEEEeCC--CCCEEEEEEcCCCCEEEEEeC-C-eEEEEeCCCCceEEEeccCC--CceEEEEEec
Q 047260 652 SDKVVSIFDIETDRQTHSLQGH--AELVNYICWDTNGDYLASVSQ-N-LVKVWSMASGECIQELSSNG--NQFHSCVFHP 725 (784)
Q Consensus 652 ~Dg~I~IwDl~t~~~i~~l~~h--~~~V~sl~~spdg~~Lasgsd-d-~I~IwDl~t~~~i~~l~~~~--~~I~sl~fsp 725 (784)
.++.|++||.. ++.+..+..+ ...+..++++++|+++++... + .|.+||. +++.+..+..+. ..+.+++++|
T Consensus 183 ~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET
T ss_pred CCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC
Confidence 68999999974 5566666543 367899999999998888764 4 8999995 566777776543 3477999999
Q ss_pred CCCEEEEEECCCeEEEEECCCC
Q 047260 726 SYSTLLVVGGISSLELWNMAEN 747 (784)
Q Consensus 726 dg~~L~s~s~dg~I~Iwdl~~~ 747 (784)
++..+++ +.+++|++|++...
T Consensus 261 ~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 261 DGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TTEEEEE-ETTTEEEEEECSCC
T ss_pred CCcEEEE-CCCCeEEEEEcccc
Confidence 9975555 67899999998654
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=7.6e-16 Score=168.64 Aligned_cols=273 Identities=12% Similarity=0.078 Sum_probs=181.5
Q ss_pred cccccCCCceEeccccCCcceeEEeecCCCCcceeccccCCCCccCCCCCCcceeEEeEeecCCCceEEEEEcCCCCEEE
Q 047260 444 SNLLEDIDRFADVGSIDENMESLLSHDGGDGRELYGTLKHSPEHQKQPTKGFTFCEVGCIRSRNSKVTCCHFSSDGKLLA 523 (784)
Q Consensus 444 ~~~~~~~~~ll~~gS~D~~v~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~i~~l~~H~~~V~~l~fspdg~~La 523 (784)
..+.++...++.++..++...+|...... + .......+|...+.+++|+|||+.|+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~-g-----------------------~~~~lt~~~~~~~~~~~~spdg~~l~ 96 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNT-Q-----------------------VATQLTEGRGDNTFGGFLSPDDDALF 96 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTT-C-----------------------EEEECCCSSCBCSSSCEECTTSSEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCC-C-----------------------ceEEeeeCCCCCccceEEcCCCCEEE
Confidence 45677887777766557766666543221 0 01112233444555678999999999
Q ss_pred EEeCCCeEEEEECCCCceeeecCCCCCCeEEEEE--ccCCCEEEEEe----------------------CCCeEEEEcCC
Q 047260 524 SSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRF--RPNSSQLATAS----------------------VDKSVRLWDAA 579 (784)
Q Consensus 524 sgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~f--spdg~~Latgs----------------------~Dg~I~IWdl~ 579 (784)
.++.++.|++||+.+++....+..+...+....| ++++++++... .+..|.+||+.
T Consensus 97 ~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 97 YVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred EEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 9999999999999999887777666666654444 88999887532 34689999999
Q ss_pred CCcceeeeccCCCCCeEEEEEcC-CCCcEEEEEeC-----CCeEEEEeCCCCeeEEeecC----CeeEEEEecCCCEEEE
Q 047260 580 NPNFCSQAYTGHSSPIMSLDFHP-KKTDLFCFCDN-----DNEIQYWSINPFLCTHITKG----GTAQVRFQPRIGQLLA 649 (784)
Q Consensus 580 ~~~~~~~~~~~h~~~V~sl~~sp-~~~~ll~sgs~-----dg~I~iwDl~~~~~~~~~~~----~v~~v~fsp~~~~Ll~ 649 (784)
+++ ...+..+...+..+.|+| ++..++++... ...|.++|+........... .+..+.|+|+++.|+.
T Consensus 177 ~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 177 TGE--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp TCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred CCc--eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEE
Confidence 875 233345567789999999 88766555543 34788888876544433332 3567889999998766
Q ss_pred EEC-CC----cEEEEECCCCeEEE--EEeCCCCC---EEEEEEcCCCCEEEEEe----------CCeEEEEeCCCCceEE
Q 047260 650 AAS-DK----VVSIFDIETDRQTH--SLQGHAEL---VNYICWDTNGDYLASVS----------QNLVKVWSMASGECIQ 709 (784)
Q Consensus 650 ~s~-Dg----~I~IwDl~t~~~i~--~l~~h~~~---V~sl~~spdg~~Lasgs----------dd~I~IwDl~t~~~i~ 709 (784)
.+. ++ .|++||+.+++... .+.++... ...++|+|||+.|+... +..|++||+.+++. .
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~ 333 (388)
T 3pe7_A 255 VSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-H 333 (388)
T ss_dssp EEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-E
T ss_pred EecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-E
Confidence 554 22 39999999886432 33221000 11136899999877532 22899999998765 3
Q ss_pred EeccCCC-----------ceEEEEEecCCCEEEEEEC-CCeEEEEE
Q 047260 710 ELSSNGN-----------QFHSCVFHPSYSTLLVVGG-ISSLELWN 743 (784)
Q Consensus 710 ~l~~~~~-----------~I~sl~fspdg~~L~s~s~-dg~I~Iwd 743 (784)
.+..+.. .+.+++|+|+++.|+.++. ++...||.
T Consensus 334 ~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 334 RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 4544444 5788899999998887775 55555553
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=2.2e-15 Score=161.93 Aligned_cols=263 Identities=12% Similarity=0.075 Sum_probs=188.4
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeee
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~ 587 (784)
..|.+++|++++..++..+.++.+++| .++....+..+...+.+++|++++++++++..++.|.+||.++++ ....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~-~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE-IKRP 81 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc-EEEE
Confidence 347788899988878777888899999 345566666777788999999999988888889999999998766 3333
Q ss_pred ccCCCCCeEEEEEcCCCCcEEEEEeCC----CeEEEEeCCCCeeEEee-----cCCeeEEEEecCCCEEEEEEC------
Q 047260 588 YTGHSSPIMSLDFHPKKTDLFCFCDND----NEIQYWSINPFLCTHIT-----KGGTAQVRFQPRIGQLLAAAS------ 652 (784)
Q Consensus 588 ~~~h~~~V~sl~~sp~~~~ll~sgs~d----g~I~iwDl~~~~~~~~~-----~~~v~~v~fsp~~~~Ll~~s~------ 652 (784)
...+...+.+++|++++. ++++...+ +.|.+||.++....... ...+..++++|++..+++...
T Consensus 82 ~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred eeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 334567899999999986 66666555 68999999876554222 245788999999876665543
Q ss_pred CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCC-CceEEE--------eccCCCceEEE
Q 047260 653 DKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS--QNLVKVWSMAS-GECIQE--------LSSNGNQFHSC 721 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t-~~~i~~--------l~~~~~~I~sl 721 (784)
.+.|..+|..+++.... ..+...+..++|+|++++|+.+. ++.|.+||+.+ +..+.. +..+ ..+..+
T Consensus 161 ~~~l~~~~~~~~~~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i 238 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTPI-IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSC 238 (333)
T ss_dssp CEEEEEECTTSCCEEEE-EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEE
T ss_pred CceEEEEeCCCCEEEEe-ecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCce
Confidence 35677777665544332 22334578999999998666554 45999999964 333321 1111 467889
Q ss_pred EEecCCCEEEEEECCCeEEEEECCCCceEEecccCC------ceEEEEEeCCCCEEEEEECC
Q 047260 722 VFHPSYSTLLVVGGISSLELWNMAENKSMTIAAHEN------IISALAQSPVTGMVASASHD 777 (784)
Q Consensus 722 ~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~------~V~slafspdg~~LaSgs~D 777 (784)
++++++..+++...++.|.+||........+..+.. .+.+++|++|++.|+.++.+
T Consensus 239 ~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 239 CIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 999999877777778899999985433334433322 68999999998777666555
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.70 E-value=3.9e-15 Score=160.81 Aligned_cols=233 Identities=10% Similarity=0.086 Sum_probs=175.2
Q ss_pred CCCeEEEEEccCCCEEEEEeCC------------------------CeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCC
Q 047260 549 KSVVTDVRFRPNSSQLATASVD------------------------KSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKK 604 (784)
Q Consensus 549 ~~~It~i~fspdg~~Latgs~D------------------------g~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~ 604 (784)
-+.|.+|+++++|+++++...+ +.|.+||..+++.....-.++-..+..+++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999988888777 4799999988774333223455678999999998
Q ss_pred CcEEEEEeCCCeEEEEeCCCCe-eEEeec------------CCeeEEEEec-CCCEEEEEE-CCCcEEEEECCCCeEEEE
Q 047260 605 TDLFCFCDNDNEIQYWSINPFL-CTHITK------------GGTAQVRFQP-RIGQLLAAA-SDKVVSIFDIETDRQTHS 669 (784)
Q Consensus 605 ~~ll~sgs~dg~I~iwDl~~~~-~~~~~~------------~~v~~v~fsp-~~~~Ll~~s-~Dg~I~IwDl~t~~~i~~ 669 (784)
. ++++...++.|++||.+... .+..+. .....++++| ++..+++.+ .++.|++|| .+++.+..
T Consensus 103 ~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 103 N-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp C-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred C-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 8 78888888999999987542 233221 2577899999 555555554 589999999 56777766
Q ss_pred EeCC----------CCCEEEEEEcCC-CCEEEEEeCC-eEEEEeCCCCceEEEec--cCCCceEEEEEecCCCEEEEEE-
Q 047260 670 LQGH----------AELVNYICWDTN-GDYLASVSQN-LVKVWSMASGECIQELS--SNGNQFHSCVFHPSYSTLLVVG- 734 (784)
Q Consensus 670 l~~h----------~~~V~sl~~spd-g~~Lasgsdd-~I~IwDl~t~~~i~~l~--~~~~~I~sl~fspdg~~L~s~s- 734 (784)
+... ......|+++|+ +.++++...+ .|++||..+++.+..+. .+...+..++|+| +..+.+.+
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCC
Confidence 6422 234889999998 5655555544 99999999899988884 3556788999999 32222222
Q ss_pred ------CCCeEEEEECCCCceEEec----ccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 735 ------GISSLELWNMAENKSMTIA----AHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 735 ------~dg~I~Iwdl~~~~~~~~~----~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.+..|++||+.+++.+... .+...+.+|+++|+|.++++...+++|++|+
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 2348999999999888553 5677899999999998888888899999985
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=1.6e-14 Score=151.82 Aligned_cols=232 Identities=11% Similarity=0.122 Sum_probs=170.7
Q ss_pred CCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeecc------CCCCCeEEEEEcCCCCcEEEEEeC-CCeEEE
Q 047260 547 DHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYT------GHSSPIMSLDFHPKKTDLFCFCDN-DNEIQY 619 (784)
Q Consensus 547 ~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~------~h~~~V~sl~~sp~~~~ll~sgs~-dg~I~i 619 (784)
++-..+.+++++++++++++...++.|.+||... + ....+. ++...+.++++.+.+..++++... ++.|++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~-~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-R-FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-C-EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCC-c-EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4556789999999999888888899999999873 3 233222 244578999995333446666543 889999
Q ss_pred EeCCCCeeEEeec----CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEe--CCCCCEEEEEEcCCCCEEEEEe
Q 047260 620 WSINPFLCTHITK----GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQ--GHAELVNYICWDTNGDYLASVS 693 (784)
Q Consensus 620 wDl~~~~~~~~~~----~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~--~h~~~V~sl~~spdg~~Lasgs 693 (784)
||.. ...+..+. ..+..+++++++..+++...++.|.+||.. ++.+..+. .+...+..++++++|+++++..
T Consensus 105 ~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 105 YNQY-GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp ECTT-SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred ECCC-CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 9954 44444432 357889999998866665668999999964 55555554 3456789999999999777766
Q ss_pred -CCeEEEEeCCCCceEEEeccC--CCceEEEEEecCCCEEEEEECCC-eEEEEECCCCceEEecccC--CceEEEEEeCC
Q 047260 694 -QNLVKVWSMASGECIQELSSN--GNQFHSCVFHPSYSTLLVVGGIS-SLELWNMAENKSMTIAAHE--NIISALAQSPV 767 (784)
Q Consensus 694 -dd~I~IwDl~t~~~i~~l~~~--~~~I~sl~fspdg~~L~s~s~dg-~I~Iwdl~~~~~~~~~~h~--~~V~slafspd 767 (784)
++.|++||. +++.+..+..+ ...+..+++++++..+++...++ .|.+||........+..+. ..+.+++++|+
T Consensus 183 ~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 183 RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETT
T ss_pred CCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCC
Confidence 459999997 55666677544 25788999999998777777776 9999996544333444333 34789999999
Q ss_pred CCEEEEEECCCcEEEeC
Q 047260 768 TGMVASASHDSSVKLWK 784 (784)
Q Consensus 768 g~~LaSgs~DG~V~IWd 784 (784)
++++++ +.|++|+||+
T Consensus 262 g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 262 GSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp TEEEEE-ETTTEEEEEE
T ss_pred CcEEEE-CCCCeEEEEE
Confidence 987776 6799999995
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.69 E-value=9.8e-14 Score=148.95 Aligned_cols=242 Identities=14% Similarity=0.117 Sum_probs=174.6
Q ss_pred EeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCC----CeEEE
Q 047260 500 VGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVD----KSVRL 575 (784)
Q Consensus 500 i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~D----g~I~I 575 (784)
+..+..+...+.+++|+++|++++++..++.|.+||.++++.......+...+.+++|+++++++++...+ +.|.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 34456677788999999999988888889999999999887665544567789999999999888877666 68999
Q ss_pred EcCCCCcceeeec--cCCCCCeEEEEEcCCCCcEEEEEeC------CCeEEEEeCCCCeeEEe--ecCCeeEEEEecCCC
Q 047260 576 WDAANPNFCSQAY--TGHSSPIMSLDFHPKKTDLFCFCDN------DNEIQYWSINPFLCTHI--TKGGTAQVRFQPRIG 645 (784)
Q Consensus 576 Wdl~~~~~~~~~~--~~h~~~V~sl~~sp~~~~ll~sgs~------dg~I~iwDl~~~~~~~~--~~~~v~~v~fsp~~~ 645 (784)
||.++.... ..+ ..+...+.+++++|++. ++++... .+.|..+|..+.+.... ....+..++|+|+++
T Consensus 117 ~d~~~~~~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 117 ATENGDNLQ-DIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp ECTTSCSCE-EEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSS
T ss_pred EeCCCCEEE-EEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCC
Confidence 999876532 122 13446789999999986 5555443 35677777665433322 224577899999998
Q ss_pred EEEEEEC-CCcEEEEECCC-CeEEEE--------EeCCCCCEEEEEEcCCCCEEEEEeC-CeEEEEeCCCCceEEEeccC
Q 047260 646 QLLAAAS-DKVVSIFDIET-DRQTHS--------LQGHAELVNYICWDTNGDYLASVSQ-NLVKVWSMASGECIQELSSN 714 (784)
Q Consensus 646 ~Ll~~s~-Dg~I~IwDl~t-~~~i~~--------l~~h~~~V~sl~~spdg~~Lasgsd-d~I~IwDl~t~~~i~~l~~~ 714 (784)
.++++.. ++.|.+||+.+ +..+.. +.++ ..+..++++++|+++++... +.|.+||. +++.+..+..+
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIP 272 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECT
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcC
Confidence 7766654 78999999964 332211 1122 46788999999998887765 58999998 56777777554
Q ss_pred CC------ceEEEEEecCCCEEEEEECCC------eEEEEECC
Q 047260 715 GN------QFHSCVFHPSYSTLLVVGGIS------SLELWNMA 745 (784)
Q Consensus 715 ~~------~I~sl~fspdg~~L~s~s~dg------~I~Iwdl~ 745 (784)
.. .+.+++|+|++..|++++.++ .|..+++.
T Consensus 273 ~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 273 GRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 33 688999999988887776653 45555544
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.69 E-value=2.8e-13 Score=142.03 Aligned_cols=271 Identities=9% Similarity=-0.008 Sum_probs=192.6
Q ss_pred eecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeee-cCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCC
Q 047260 503 IRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTEST-PEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANP 581 (784)
Q Consensus 503 l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~-l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~ 581 (784)
+..+...+.+++++++|+++++...++.|.+||.. ++.... +..+...+.++++.+++.++++...++.|..||.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 34456789999999999977776668899999988 554332 23355789999999999888877778899999986 3
Q ss_pred cceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe-e---cCCeeEEEEecCCCEEEEEECCCcEE
Q 047260 582 NFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI-T---KGGTAQVRFQPRIGQLLAAASDKVVS 657 (784)
Q Consensus 582 ~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~-~---~~~v~~v~fsp~~~~Ll~~s~Dg~I~ 657 (784)
.............+.++++.+++. ++++...++.|.+||.. ...... . ...+..+++.+++..+++...++.|.
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITDD-GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred cEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECCC-CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 322222223456789999999875 66666678899999984 333222 2 24578899999986666555578999
Q ss_pred EEECCCCeEEEE-EeCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCceEEE-eccCCCceEEEEEecCCCEEEEEE
Q 047260 658 IFDIETDRQTHS-LQGHAELVNYICWDTNGDYLASVS-QNLVKVWSMASGECIQE-LSSNGNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 658 IwDl~t~~~i~~-l~~h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~~i~~-l~~~~~~I~sl~fspdg~~L~s~s 734 (784)
+||. +++.... +......+.+++++++|.++++.. .+.|.+||. +++.... +......+.++++++++..+++..
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc
Confidence 9999 6655432 333456788999999999777665 459999999 6654332 233456789999999998555554
Q ss_pred CCCeEEEEECCCCceEEe--cccCCceEEEEEeCCCCEEEEEECCCcEE
Q 047260 735 GISSLELWNMAENKSMTI--AAHENIISALAQSPVTGMVASASHDSSVK 781 (784)
Q Consensus 735 ~dg~I~Iwdl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~DG~V~ 781 (784)
.++.|.+||. ++....+ ..+...+.++++ +++.++++...++.++
T Consensus 244 ~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~ 290 (299)
T 2z2n_A 244 GANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGK 290 (299)
T ss_dssp TTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEE
T ss_pred CCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEE
Confidence 6789999998 4544333 345567999999 8888777665444333
No 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=1.6e-15 Score=179.02 Aligned_cols=237 Identities=10% Similarity=0.058 Sum_probs=161.8
Q ss_pred EEEEc--CCCCE-EEEEeC-CCeEEEEECC--C-CceeeecCC-----CCCCeEEEEEccCCCEEEEEeCC---------
Q 047260 512 CCHFS--SDGKL-LASSGH-DRKVVLWNMD--T-LQTESTPED-----HKSVVTDVRFRPNSSQLATASVD--------- 570 (784)
Q Consensus 512 ~l~fs--pdg~~-Lasgs~-Dg~I~IWd~~--t-~~~~~~l~~-----h~~~It~i~fspdg~~Latgs~D--------- 570 (784)
.+.|+ |||++ |+.++. +..|.+|++. . ++ ...+.. |...+.+++|+|||+.|++++.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 44454 99998 776654 5567777765 2 33 444544 67789999999999999999877
Q ss_pred -CeEEEEcCCC------Ccceeeecc-CCCCCeEEEEEcCCCCcEEEEEeCC-------CeEEEEeCC-CC---eeEEee
Q 047260 571 -KSVRLWDAAN------PNFCSQAYT-GHSSPIMSLDFHPKKTDLFCFCDND-------NEIQYWSIN-PF---LCTHIT 631 (784)
Q Consensus 571 -g~I~IWdl~~------~~~~~~~~~-~h~~~V~sl~~sp~~~~ll~sgs~d-------g~I~iwDl~-~~---~~~~~~ 631 (784)
..|++||+.+ +. ...+. .+...+..++|+||+..+++++... ..|++||+. ++ ......
T Consensus 160 ~~~i~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSA--VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEEEETTSTTTTCGGG--SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCc--eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 5899999987 33 33444 5557788899999999766655433 479999998 45 333332
Q ss_pred ---cCCeeEEEEecCCCEEEEEECCC--cEEEEECCCCeEEEEEeCCCCC--------EEEEEEcCCCCEEEEEeCCeEE
Q 047260 632 ---KGGTAQVRFQPRIGQLLAAASDK--VVSIFDIETDRQTHSLQGHAEL--------VNYICWDTNGDYLASVSQNLVK 698 (784)
Q Consensus 632 ---~~~v~~v~fsp~~~~Ll~~s~Dg--~I~IwDl~t~~~i~~l~~h~~~--------V~sl~~spdg~~Lasgsdd~I~ 698 (784)
...+..+.|+|+++.++++..++ .|.+||+.+++.......+... +.+++|++++++++++.++.++
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAV 317 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCE
T ss_pred CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccE
Confidence 35678899999999666666677 6777777666654433322222 5678999999999888767666
Q ss_pred EE--eCCCCceEEEeccCCCceEEE-EEecCCCEEEEEECCC--eEEEEECCCCceEEe
Q 047260 699 VW--SMASGECIQELSSNGNQFHSC-VFHPSYSTLLVVGGIS--SLELWNMAENKSMTI 752 (784)
Q Consensus 699 Iw--Dl~t~~~i~~l~~~~~~I~sl-~fspdg~~L~s~s~dg--~I~Iwdl~~~~~~~~ 752 (784)
|| |+.+++ +..+..+...+..+ .++++.-.+++++.+. .|.+||+.+++...+
T Consensus 318 l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 318 LGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp EEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred EEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 66 666555 67777777777766 4443322233334443 566778777776544
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.67 E-value=3e-15 Score=163.78 Aligned_cols=233 Identities=9% Similarity=0.058 Sum_probs=160.7
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEE-------------------EEEccCCCEEEEE-----
Q 047260 512 CCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTD-------------------VRFRPNSSQLATA----- 567 (784)
Q Consensus 512 ~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~-------------------i~fspdg~~Latg----- 567 (784)
++.|+|||++|+.++.++.|++||+.+++.......+...... +.|+|+++.++.+
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 4789999999999999999999999988776655545443333 3567777766654
Q ss_pred eCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcC-CCCcEEEEEeCC-----CeEEEEeCCCCeeEEeecC----CeeE
Q 047260 568 SVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHP-KKTDLFCFCDND-----NEIQYWSINPFLCTHITKG----GTAQ 637 (784)
Q Consensus 568 s~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp-~~~~ll~sgs~d-----g~I~iwDl~~~~~~~~~~~----~v~~ 637 (784)
..+..|.+||+.+++. .. +..+...+..+.|+| ++..++++.... ..|.+||+........... .+..
T Consensus 165 ~~~~~l~~~d~~~g~~-~~-~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 242 (396)
T 3c5m_A 165 NPTCRLIKVDIETGEL-EV-IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTH 242 (396)
T ss_dssp CCCEEEEEEETTTCCE-EE-EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEE
T ss_pred CCcceEEEEECCCCcE-Ee-eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccc
Confidence 3567899999988662 22 234567789999999 666555544322 4689999876544333332 3567
Q ss_pred EEEecCCCEEEEEECC-----CcEEEEECCCCeEEEEEeCCCCCEEEEEEcC-CCCEEEEEe-----------------C
Q 047260 638 VRFQPRIGQLLAAASD-----KVVSIFDIETDRQTHSLQGHAELVNYICWDT-NGDYLASVS-----------------Q 694 (784)
Q Consensus 638 v~fsp~~~~Ll~~s~D-----g~I~IwDl~t~~~i~~l~~h~~~V~sl~~sp-dg~~Lasgs-----------------d 694 (784)
+.|+|+++.|+.++.+ +.|++||+.+++...... .. .+. +.|+| +|++|++++ +
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~ 319 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEND 319 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC----------CCCCC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCC
Confidence 8999999988777653 449999998886544332 22 233 89999 999888754 2
Q ss_pred CeEEEEeCCCCceEEEeccCCC-----------ceEEEEEecCCCEEEEEECC-C--eEEEEECCCCceE
Q 047260 695 NLVKVWSMASGECIQELSSNGN-----------QFHSCVFHPSYSTLLVVGGI-S--SLELWNMAENKSM 750 (784)
Q Consensus 695 d~I~IwDl~t~~~i~~l~~~~~-----------~I~sl~fspdg~~L~s~s~d-g--~I~Iwdl~~~~~~ 750 (784)
..|++||+.+++.. .+..+.. .+..+.|+|+++.|+.++.+ + .|+++++.++...
T Consensus 320 ~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 320 PFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp CEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred CcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 38999999887653 3433333 25668999999998887763 4 4555566666544
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.66 E-value=1e-14 Score=174.35 Aligned_cols=241 Identities=6% Similarity=0.015 Sum_probs=177.3
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCe--------
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHDR-----KVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKS-------- 572 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~Dg-----~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~-------- 572 (784)
|...+..++|||||++||.+..++ .|++||+.+++.+.....+ ..+..++|+||++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 445688999999999998776543 8999999998876543222 23678999999999999988876
Q ss_pred --------EEEEcCCCCcc---eeeeccCCCCCeEEEEEcCCCCcEEEEEeC----CCeEEEEeCCC------C----ee
Q 047260 573 --------VRLWDAANPNF---CSQAYTGHSSPIMSLDFHPKKTDLFCFCDN----DNEIQYWSINP------F----LC 627 (784)
Q Consensus 573 --------I~IWdl~~~~~---~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~----dg~I~iwDl~~------~----~~ 627 (784)
|++|++.++.. .+.....|...+..+.|+|++..++++... +..|++||+.+ . ..
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 99999987652 222222355668899999999977776652 57899999875 3 12
Q ss_pred EEeecCCeeEEEEecCCCEEEEEECC----CcEEEEECCCCe--EEEEEeCCCC--CEEEEEEcCCCCEEEEEeCC---e
Q 047260 628 THITKGGTAQVRFQPRIGQLLAAASD----KVVSIFDIETDR--QTHSLQGHAE--LVNYICWDTNGDYLASVSQN---L 696 (784)
Q Consensus 628 ~~~~~~~v~~v~fsp~~~~Ll~~s~D----g~I~IwDl~t~~--~i~~l~~h~~--~V~sl~~spdg~~Lasgsdd---~ 696 (784)
+......+. ..|+++++.|+..+.. +.|.+||+.++. ....+..|.. .+..++|++++.++++..++ .
T Consensus 282 l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 282 LIDNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred eeCCCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 222223333 3588999988887763 369999998764 2344444544 68889999777777777644 6
Q ss_pred EEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEEC----CCeEEEEECCCCc
Q 047260 697 VKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGG----ISSLELWNMAENK 748 (784)
Q Consensus 697 I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~----dg~I~Iwdl~~~~ 748 (784)
|.+||+.+++.+..+..+...+..+.++|++..++.... .++|++||+.+++
T Consensus 361 l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 888898888888888877778888999999877665433 2689999998876
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.66 E-value=4.4e-14 Score=149.43 Aligned_cols=241 Identities=9% Similarity=0.013 Sum_probs=178.0
Q ss_pred eEeecCCCceEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCC
Q 047260 501 GCIRSRNSKVTCCHFSSDGK-LLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAA 579 (784)
Q Consensus 501 ~~l~~H~~~V~~l~fspdg~-~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~ 579 (784)
..+..+.....+++|+|+|+ +++++..++.|.+||..++ ...+..+...+.+++|+++++++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 44455677789999999998 7788888999999999977 55666677889999999999988777777899999997
Q ss_pred CCcceeeeccC----CCCCeEEEEEcCCCCcEEEEE----e-------------CCCeEEEEeCCCCeeEEee--cCCee
Q 047260 580 NPNFCSQAYTG----HSSPIMSLDFHPKKTDLFCFC----D-------------NDNEIQYWSINPFLCTHIT--KGGTA 636 (784)
Q Consensus 580 ~~~~~~~~~~~----h~~~V~sl~~sp~~~~ll~sg----s-------------~dg~I~iwDl~~~~~~~~~--~~~v~ 636 (784)
+++.. ..... ....+..++++|++. ++++. . ..+.|..++.. ....... .....
T Consensus 99 ~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 99 GGEWE-SIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPN 175 (296)
T ss_dssp TCCEE-EEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEE
T ss_pred CCcEE-EEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCc
Confidence 76632 22111 123467899999987 55552 2 13467777665 3332222 24567
Q ss_pred EEEEecCCCEEEEEECCCcEEEEECC-CCeE---EEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEec
Q 047260 637 QVRFQPRIGQLLAAASDKVVSIFDIE-TDRQ---THSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELS 712 (784)
Q Consensus 637 ~v~fsp~~~~Ll~~s~Dg~I~IwDl~-t~~~---i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~ 712 (784)
.++|+|+++.+++.+.++.|.+||+. +++. ...+..+...+..++++++|+++++. ++.|.+||.. ++.+..+.
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEE
Confidence 89999999998555568999999997 4544 33343345567789999999987777 7799999986 77888887
Q ss_pred cCCCceEEEEE-ecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 713 SNGNQFHSCVF-HPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 713 ~~~~~I~sl~f-spdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
.+.. +.+++| .|+++.|++++.+ .|..++..+.+..
T Consensus 254 ~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 254 TPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp CSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCC
T ss_pred CCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEccccccc
Confidence 7766 899999 5888889888876 4666677666543
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=2.4e-14 Score=154.31 Aligned_cols=232 Identities=13% Similarity=0.166 Sum_probs=160.2
Q ss_pred CceEEEEEcCCCCEEEEEeCC---C--eEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCC------------
Q 047260 508 SKVTCCHFSSDGKLLASSGHD---R--KVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVD------------ 570 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~D---g--~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~D------------ 570 (784)
..+.+++|||||++||.++.+ + .|.+||+.+++.......+ . +.+++|+|+++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 458899999999999887654 3 4888899887765554333 3 9999999999999888743
Q ss_pred ---------------CeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCC---------CeEEEEeCCCCe
Q 047260 571 ---------------KSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDND---------NEIQYWSINPFL 626 (784)
Q Consensus 571 ---------------g~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d---------g~I~iwDl~~~~ 626 (784)
..|.+||+.+++. ...+.. . .+..+.|+|++ +++++..+ ..|.++| +..
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~ 209 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK 209 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEE-EEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE
T ss_pred cceeecCcccccCccceEEEEECCCCeE-EeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc
Confidence 5789999987663 122333 3 78899999998 66655443 2455555 444
Q ss_pred eEEeecCCeeEEEEecCCCEEEEEECC--------CcEEEEECCCCeEEEEEeCCCCCEEE-EEEcCCCCEEEEEeCC-e
Q 047260 627 CTHITKGGTAQVRFQPRIGQLLAAASD--------KVVSIFDIETDRQTHSLQGHAELVNY-ICWDTNGDYLASVSQN-L 696 (784)
Q Consensus 627 ~~~~~~~~v~~v~fsp~~~~Ll~~s~D--------g~I~IwDl~t~~~i~~l~~h~~~V~s-l~~spdg~~Lasgsdd-~ 696 (784)
....... .....++|+++.|+.++.+ ..|.+|| +++.......+...+.. +.|+ ++ ++++++++ .
T Consensus 210 ~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 210 EEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp EEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred eEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 3332222 3333449999998887754 3688888 55554444556778886 9999 88 77777644 8
Q ss_pred EEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeE-EEEECCCCceEEecccCCc
Q 047260 697 VKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSL-ELWNMAENKSMTIAAHENI 758 (784)
Q Consensus 697 I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I-~Iwdl~~~~~~~~~~h~~~ 758 (784)
++|| +.+++... +..+...|.++.|+| ..+++++.++.. .||.+. ++...+..|...
T Consensus 285 ~~l~-~~~g~~~~-~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~~~~lt~~n~~ 342 (347)
T 2gop_A 285 VNLY-IWDGEIKP-IAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GEEKQLTDYNDP 342 (347)
T ss_dssp EEEE-EESSSEEE-EECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SSEEECCCTTST
T ss_pred EEEE-EcCCceEE-EecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-CcEEEeccccHh
Confidence 8998 77666544 444567899999999 677777777654 677666 655566665543
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=1.9e-13 Score=147.64 Aligned_cols=249 Identities=10% Similarity=0.025 Sum_probs=185.7
Q ss_pred CCCeEEEEECCCCceeeecC------CCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEE
Q 047260 527 HDRKVVLWNMDTLQTESTPE------DHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDF 600 (784)
Q Consensus 527 ~Dg~I~IWd~~t~~~~~~l~------~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~ 600 (784)
.++.|.+||.++++....+. ........+.+. +++.+++...++.|.+||..+.+. ...+. ....+..+++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~-~~~i~-~~~~p~~i~~ 91 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE-VGRIT-GFTSPRYIHF 91 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE-EEEEE-CCSSEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEE-EEEcC-CCCCCcEEEE
Confidence 37899999999988766542 122456778874 445555666679999999998773 34343 3467889999
Q ss_pred cCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec--C------CeeEEEEecCCCEEEEEE--CCCcEEEEECCCCeEEEEE
Q 047260 601 HPKKTDLFCFCDNDNEIQYWSINPFLCTHITK--G------GTAQVRFQPRIGQLLAAA--SDKVVSIFDIETDRQTHSL 670 (784)
Q Consensus 601 sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~--~------~v~~v~fsp~~~~Ll~~s--~Dg~I~IwDl~t~~~i~~l 670 (784)
++++ .++++...++.|.+||..+.+....+. . ....+++ +++.++++. .++.|.+||+.+++.+..+
T Consensus 92 ~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 92 LSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred eCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 8887 566666579999999999887765443 2 4456777 466777776 3899999999999988887
Q ss_pred eCCCCCEEEEEEcCCCCEEEEEeC-----------CeEEEEeCCCCceEEEeccC-CCceEEEEEecCCCEEEEEECCCe
Q 047260 671 QGHAELVNYICWDTNGDYLASVSQ-----------NLVKVWSMASGECIQELSSN-GNQFHSCVFHPSYSTLLVVGGISS 738 (784)
Q Consensus 671 ~~h~~~V~sl~~spdg~~Lasgsd-----------d~I~IwDl~t~~~i~~l~~~-~~~I~sl~fspdg~~L~s~s~dg~ 738 (784)
... .....++++++|++++++.. +.|.+||..+++.+..+... ......++|+|+++.|+++.. .
T Consensus 169 ~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~ 245 (328)
T 3dsm_A 169 TIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D 245 (328)
T ss_dssp ECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S
T ss_pred EcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E
Confidence 643 34567899999998777653 48999999999888777543 346899999999999888765 8
Q ss_pred EEEEECCCCceEE--e-cccCCceEEEEEeCC-CCEEEEE----ECCCcEEEeC
Q 047260 739 LELWNMAENKSMT--I-AAHENIISALAQSPV-TGMVASA----SHDSSVKLWK 784 (784)
Q Consensus 739 I~Iwdl~~~~~~~--~-~~h~~~V~slafspd-g~~LaSg----s~DG~V~IWd 784 (784)
|.+||..+++... + ..+.....+++++|+ +.++++. ..++.|.+||
T Consensus 246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 9999998887541 1 122467899999995 5555555 4688999986
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.63 E-value=1.6e-13 Score=145.06 Aligned_cols=233 Identities=9% Similarity=0.017 Sum_probs=169.0
Q ss_pred eeeecCCCCCCeEEEEEccCCC-EEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEE
Q 047260 541 TESTPEDHKSVVTDVRFRPNSS-QLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQY 619 (784)
Q Consensus 541 ~~~~l~~h~~~It~i~fspdg~-~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~i 619 (784)
.+..+..+.....+++|+|+++ +++++..++.|.+||..++ ...+..+...+.++++++++. ++++...++.|.+
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLER 94 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEEE
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---eEEEECCCCCcceeeECCCCc-EEEEecCCCeEEE
Confidence 3344445667788999999998 7788888999999999875 344555677899999999987 6666666789999
Q ss_pred EeCCCCeeEEeec-------CCeeEEEEecCCCEEEEE----E-------------CCCcEEEEECCCCeEEEEEeCCCC
Q 047260 620 WSINPFLCTHITK-------GGTAQVRFQPRIGQLLAA----A-------------SDKVVSIFDIETDRQTHSLQGHAE 675 (784)
Q Consensus 620 wDl~~~~~~~~~~-------~~v~~v~fsp~~~~Ll~~----s-------------~Dg~I~IwDl~t~~~i~~l~~h~~ 675 (784)
||..+++...... ..+..++++|+|..+++. + ..+.|..+|.. ++ +..+..+..
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~ 172 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRV 172 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCS
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCC
Confidence 9997665443321 245679999999877663 2 13466666665 44 344455667
Q ss_pred CEEEEEEcCCCCEEEEEeC-CeEEEEeCC-CCce---EEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 676 LVNYICWDTNGDYLASVSQ-NLVKVWSMA-SGEC---IQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 676 ~V~sl~~spdg~~Lasgsd-d~I~IwDl~-t~~~---i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
....++|+|++++|++.+. +.|.+||+. +++. ...+..+...+..++++++|..+++. ++.|.+||.......
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELG 250 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEE
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEE
Confidence 7899999999999855554 499999997 5554 33343344556789999999855554 789999998744333
Q ss_pred EecccCCceEEEEE-eCCCCEEEEEECCCcEEE
Q 047260 751 TIAAHENIISALAQ-SPVTGMVASASHDSSVKL 782 (784)
Q Consensus 751 ~~~~h~~~V~slaf-spdg~~LaSgs~DG~V~I 782 (784)
.+..+.. +++++| .++++.|++++.++.+++
T Consensus 251 ~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 251 RVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp EEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred EEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 5556666 999999 588898998888875544
No 187
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=3.4e-12 Score=133.70 Aligned_cols=270 Identities=9% Similarity=-0.019 Sum_probs=191.9
Q ss_pred cCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceee-ecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc
Q 047260 505 SRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTES-TPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF 583 (784)
Q Consensus 505 ~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~-~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~ 583 (784)
.....+.+++++++|+++++...++.|.+||.. ++... .+..+...+.++++.+++.++++...++.|.+||.. ++.
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 345679999999999988877678999999988 55443 233344679999999999877777668899999988 453
Q ss_pred eeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe-e---cCCeeEEEEecCCCEEEEEECCCcEEEE
Q 047260 584 CSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI-T---KGGTAQVRFQPRIGQLLAAASDKVVSIF 659 (784)
Q Consensus 584 ~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~-~---~~~v~~v~fsp~~~~Ll~~s~Dg~I~Iw 659 (784)
...........+.++++.+++. ++++...++.|..||.. .+.... . ...+..+++.+++..+++...++.|..|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 3222333446789999998876 66666668899999987 443322 2 2457889999998854444447889999
Q ss_pred ECCCCeEEEE-EeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEE-eccCCCceEEEEEecCCCEEEEEECC
Q 047260 660 DIETDRQTHS-LQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQE-LSSNGNQFHSCVFHPSYSTLLVVGGI 736 (784)
Q Consensus 660 Dl~t~~~i~~-l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~-l~~~~~~I~sl~fspdg~~L~s~s~d 736 (784)
|. +++.... +..+...+..++++++|.++++...+ .|.+||. +++.... +......+.++++++++..+++...+
T Consensus 173 ~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 173 TN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 98 5544432 22345678999999999877776544 8999998 5544332 33345668899999999855555556
Q ss_pred CeEEEEECCCCceEEe--cccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 737 SSLELWNMAENKSMTI--AAHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 737 g~I~Iwdl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
+.|.+||. ++....+ ......+.+++++++|.++++.. . .|..+
T Consensus 251 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 251 NQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKL 296 (300)
T ss_dssp TEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEE
T ss_pred CeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEe
Confidence 89999998 4544433 33456789999999998666554 4 55544
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.61 E-value=4.7e-14 Score=168.22 Aligned_cols=244 Identities=11% Similarity=0.039 Sum_probs=167.2
Q ss_pred cCCCceEEEEEcCCCCEEEEE-----eCCCeEEEEECCCCceeeecCCCCCCe--EEEEEccCCCEEEEEeCCCe-----
Q 047260 505 SRNSKVTCCHFSSDGKLLASS-----GHDRKVVLWNMDTLQTESTPEDHKSVV--TDVRFRPNSSQLATASVDKS----- 572 (784)
Q Consensus 505 ~H~~~V~~l~fspdg~~Lasg-----s~Dg~I~IWd~~t~~~~~~l~~h~~~I--t~i~fspdg~~Latgs~Dg~----- 572 (784)
+|...+.+++|||||++||.+ +.+..|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 466679999999999999843 345689999999988651 1122222 68999999999999998876
Q ss_pred --------EEEEcCCCCcc---eeeeccCCCCCeEEEEEcCCCCcEEEEEeCC-C--eEEEEeCCCCe--eEEeecCCee
Q 047260 573 --------VRLWDAANPNF---CSQAYTGHSSPIMSLDFHPKKTDLFCFCDND-N--EIQYWSINPFL--CTHITKGGTA 636 (784)
Q Consensus 573 --------I~IWdl~~~~~---~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d-g--~I~iwDl~~~~--~~~~~~~~v~ 636 (784)
|++|++.++.. ++.....+...+..+.|+|++..++++...+ + .|++||..... .+......+.
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 275 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKY 275 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCE
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceE
Confidence 99999987652 2233334556789999999999777766544 2 67777765433 2333334445
Q ss_pred EEEEecCCCEEEEEEC----CCcEEEEECCCCeE---EEEEeCC-CCCEEEEEEcCCCCEEEEEeCC-eEEEEeCC-CCc
Q 047260 637 QVRFQPRIGQLLAAAS----DKVVSIFDIETDRQ---THSLQGH-AELVNYICWDTNGDYLASVSQN-LVKVWSMA-SGE 706 (784)
Q Consensus 637 ~v~fsp~~~~Ll~~s~----Dg~I~IwDl~t~~~---i~~l~~h-~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~-t~~ 706 (784)
...+ +++. +++.+. ++.|.+||+.++.. ...+..+ ...+..++|+ ++.++++..++ ..+||.+. +++
T Consensus 276 ~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 276 EVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp EEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 5555 6666 665554 58899999987653 3333333 4568888888 66677776644 55555443 456
Q ss_pred eEEEeccC-CCceEEEEEecCCCEEEEEEC----CCeEEEEECCCCceEEec
Q 047260 707 CIQELSSN-GNQFHSCVFHPSYSTLLVVGG----ISSLELWNMAENKSMTIA 753 (784)
Q Consensus 707 ~i~~l~~~-~~~I~sl~fspdg~~L~s~s~----dg~I~Iwdl~~~~~~~~~ 753 (784)
.+..+..+ ...+..+.++|++..++.... .++|++||+.+++...+.
T Consensus 353 ~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 353 PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 66666654 566778889999887764443 368999999988755443
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.61 E-value=1.1e-12 Score=152.31 Aligned_cols=264 Identities=11% Similarity=0.082 Sum_probs=192.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCC--CCcceeeeccCCCCC
Q 047260 517 SDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAA--NPNFCSQAYTGHSSP 594 (784)
Q Consensus 517 pdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~--~~~~~~~~~~~h~~~ 594 (784)
+.+.++++...++.|.+||..+++.+..+.. ...+..+.|+||++++++++.|+.|.+||+. +.+ ....+.. ...
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~-~v~~i~~-G~~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT-TVAEIKI-GSE 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC-EEEEEEC-CSE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc-EeEEEec-CCC
Confidence 3445677777899999999999999988853 3467799999999999999999999999995 555 3333433 234
Q ss_pred eEEEEEc----CCCCcEEEEEeCCCeEEEEeCCCCeeEEeecC--------------CeeEEEEecCCCEEEEEEC-CCc
Q 047260 595 IMSLDFH----PKKTDLFCFCDNDNEIQYWSINPFLCTHITKG--------------GTAQVRFQPRIGQLLAAAS-DKV 655 (784)
Q Consensus 595 V~sl~~s----p~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~--------------~v~~v~fsp~~~~Ll~~s~-Dg~ 655 (784)
...++|+ |++++++++...++.|.++|..+.+.+..... .+..+.+++++..+++... +|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 6799999 69998998888899999999998777655431 4567778888776666555 699
Q ss_pred EEEEECCCCeEE--EEEeCCCCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCCCceEEEecc-CCCc--eEEE-EEecCC
Q 047260 656 VSIFDIETDRQT--HSLQGHAELVNYICWDTNGDYLASVS--QNLVKVWSMASGECIQELSS-NGNQ--FHSC-VFHPSY 727 (784)
Q Consensus 656 I~IwDl~t~~~i--~~l~~h~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t~~~i~~l~~-~~~~--I~sl-~fspdg 727 (784)
|.++|....+.+ ..+. ......++.|+|+|++|+++. ++.|.++|+.+++.+..+.. ...+ -... .++|++
T Consensus 322 v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~ 400 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTF 400 (567)
T ss_dssp EEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTT
T ss_pred EEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCC
Confidence 999999875432 2232 445677899999999988877 45999999999998877754 2111 0122 268886
Q ss_pred CEEEEEE--CCCeEEEEECCC-------CceE-EecccCCceEEEEEeCCCCEEEEEEC-------CCcEEEeC
Q 047260 728 STLLVVG--GISSLELWNMAE-------NKSM-TIAAHENIISALAQSPVTGMVASASH-------DSSVKLWK 784 (784)
Q Consensus 728 ~~L~s~s--~dg~I~Iwdl~~-------~~~~-~~~~h~~~V~slafspdg~~LaSgs~-------DG~V~IWd 784 (784)
..+++.+ .++.|.++|..+ .+.+ ++......-..+.++|++++|++... ...|.|||
T Consensus 401 g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 401 GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred CcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 5555544 457999999987 4444 33333233345778999998888663 35788875
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.60 E-value=1.9e-13 Score=141.84 Aligned_cols=237 Identities=12% Similarity=0.012 Sum_probs=169.3
Q ss_pred ceEEEEEcCCCCEEE-EEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeee
Q 047260 509 KVTCCHFSSDGKLLA-SSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 509 ~V~~l~fspdg~~La-sgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~ 587 (784)
...+++++++|++++ +...++.|.+||..+.........+...+.+|+++++++++++.. ++.|.+||...... ...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eee
Confidence 688999999999776 446788999999876554333333445788999999998666555 88999999876542 222
Q ss_pred ccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCC
Q 047260 588 YTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETD 664 (784)
Q Consensus 588 ~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~ 664 (784)
.......+.++++.+++. ++++...++.|.+|+..+........ .....+++++++..+++...++.|.+||....
T Consensus 103 ~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred ecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 222335789999999886 77777778899999876554433222 35678999999885555555789999999877
Q ss_pred eEEEEEeCCCCCEEEEEEcCCCCEEEEEeC-CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEE
Q 047260 665 RQTHSLQGHAELVNYICWDTNGDYLASVSQ-NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWN 743 (784)
Q Consensus 665 ~~i~~l~~h~~~V~sl~~spdg~~Lasgsd-d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwd 743 (784)
........+...+.+++++++|.++++... +.|.+||............+...+.++++++++..+++...++.|++|+
T Consensus 182 ~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 182 NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 654433334467899999999977776654 4999999876544332223335689999999998777777889999999
Q ss_pred CCCCc
Q 047260 744 MAENK 748 (784)
Q Consensus 744 l~~~~ 748 (784)
+...+
T Consensus 262 ~~~~~ 266 (270)
T 1rwi_B 262 SLEHH 266 (270)
T ss_dssp CCGGG
T ss_pred CCCcc
Confidence 87654
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=6e-13 Score=143.78 Aligned_cols=250 Identities=8% Similarity=-0.002 Sum_probs=176.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeec
Q 047260 509 KVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAY 588 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~ 588 (784)
...++.+. +++++++...++.|.+||..+++.+.++. .......++++++++.+++...++.|.+||..+.+. ...+
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~-~~~i 121 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI-TGYI 121 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE-EEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE-EEEE
Confidence 35667774 34555556667999999999999988884 456789999999885444444899999999998763 3333
Q ss_pred cCCC-----CCeEEEEEcCCCCcEEEEEe-CCCeEEEEeCCCCeeEEeec--CCeeEEEEecCCCEEEEEECC-------
Q 047260 589 TGHS-----SPIMSLDFHPKKTDLFCFCD-NDNEIQYWSINPFLCTHITK--GGTAQVRFQPRIGQLLAAASD------- 653 (784)
Q Consensus 589 ~~h~-----~~V~sl~~sp~~~~ll~sgs-~dg~I~iwDl~~~~~~~~~~--~~v~~v~fsp~~~~Ll~~s~D------- 653 (784)
.... .....+++ ++..++++.. .++.|.+||+.+.+.+..+. .....+.++++++.++++..+
T Consensus 122 ~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~ 199 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYG 199 (328)
T ss_dssp ECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSC
T ss_pred EcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccc
Confidence 2211 14556777 4555666655 48999999999887766554 345678899998755555444
Q ss_pred ---CcEEEEECCCCeEEEEEeCC-CCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEE--eccCCCceEEEEEecCC
Q 047260 654 ---KVVSIFDIETDRQTHSLQGH-AELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQE--LSSNGNQFHSCVFHPSY 727 (784)
Q Consensus 654 ---g~I~IwDl~t~~~i~~l~~h-~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~--l~~~~~~I~sl~fspdg 727 (784)
+.|.+||..+++....+... ......++|+|++++|+++.. .|.+||..+++.... +.........++++|++
T Consensus 200 ~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 200 YEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp BCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTT
T ss_pred cCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEEcCCC
Confidence 78999999999888777533 346889999999999888766 899999988875321 12224567899999965
Q ss_pred CEEEEEE-----CCCeEEEEECCCCceEEecccCCceEEEEEe
Q 047260 728 STLLVVG-----GISSLELWNMAENKSMTIAAHENIISALAQS 765 (784)
Q Consensus 728 ~~L~s~s-----~dg~I~Iwdl~~~~~~~~~~h~~~V~slafs 765 (784)
..|+++. .++.|.+||.. ++.+....-......++|-
T Consensus 279 g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~~ 320 (328)
T 3dsm_A 279 GEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCWK 320 (328)
T ss_dssp CCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEEE
T ss_pred CeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEEe
Confidence 5565554 56899999998 7665333333334555553
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.58 E-value=4.2e-13 Score=147.50 Aligned_cols=269 Identities=8% Similarity=0.060 Sum_probs=192.6
Q ss_pred EEcCCCCEEEEEeC-----CCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEe----------CCCeEEEEcC
Q 047260 514 HFSSDGKLLASSGH-----DRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATAS----------VDKSVRLWDA 578 (784)
Q Consensus 514 ~fspdg~~Lasgs~-----Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs----------~Dg~I~IWdl 578 (784)
...|+++.+++... ++.|.++|..+++.+..+.....+ . +.++||+++|++++ .++.|.+||.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 45689988887765 679999999999999988755555 4 99999999988876 3678999999
Q ss_pred CCCcceeeeccCC------CCCeEEEEEcCCCCcEEEEEeC-CCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEE
Q 047260 579 ANPNFCSQAYTGH------SSPIMSLDFHPKKTDLFCFCDN-DNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAA 651 (784)
Q Consensus 579 ~~~~~~~~~~~~h------~~~V~sl~~sp~~~~ll~sgs~-dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s 651 (784)
.+.+.......+. ......+.|+|++..++++... ++.|.++|+.+.+.+..+.-+-+...+......+++.+
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~ 196 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHC 196 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEEC
Confidence 9977433332221 1246679999999987777653 78999999999998887764433333444456777888
Q ss_pred CCCcEEEEECCC-CeEEEEEeCC----CCCEE-EEEEc-CCCCEEEEEeCCeEEEEeCCCCc--eEEEecc---------
Q 047260 652 SDKVVSIFDIET-DRQTHSLQGH----AELVN-YICWD-TNGDYLASVSQNLVKVWSMASGE--CIQELSS--------- 713 (784)
Q Consensus 652 ~Dg~I~IwDl~t-~~~i~~l~~h----~~~V~-sl~~s-pdg~~Lasgsdd~I~IwDl~t~~--~i~~l~~--------- 713 (784)
.||.+.++++.. ++.......+ ...+. ...|. ++|+++++..++.|++.|+.++. .+..+..
T Consensus 197 ~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g 276 (386)
T 3sjl_D 197 RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADG 276 (386)
T ss_dssp TTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTT
T ss_pred CCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccccc
Confidence 999999999986 5543322111 12221 23554 68877776667799999997664 3333320
Q ss_pred -CCCceEEEEEecCCCEEEEEEC----------CCeEEEEECCCCceEEecccCCceEEEEEeCCCC-EEEEEEC-CCcE
Q 047260 714 -NGNQFHSCVFHPSYSTLLVVGG----------ISSLELWNMAENKSMTIAAHENIISALAQSPVTG-MVASASH-DSSV 780 (784)
Q Consensus 714 -~~~~I~sl~fspdg~~L~s~s~----------dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs~-DG~V 780 (784)
....+..++++++++.+++... .+.|.++|+.+++.+....-...+..|++++|++ +|++++. ++.|
T Consensus 277 ~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~V 356 (386)
T 3sjl_D 277 WRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTL 356 (386)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEE
T ss_pred ccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeE
Confidence 0123345788999999888753 2479999999999885544445788999999997 7777654 8899
Q ss_pred EEeC
Q 047260 781 KLWK 784 (784)
Q Consensus 781 ~IWd 784 (784)
.|+|
T Consensus 357 sViD 360 (386)
T 3sjl_D 357 YIHD 360 (386)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9886
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=4.6e-13 Score=138.81 Aligned_cols=231 Identities=9% Similarity=-0.040 Sum_probs=165.7
Q ss_pred CeEEEEEccCCCEEE-EEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE
Q 047260 551 VVTDVRFRPNSSQLA-TASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTH 629 (784)
Q Consensus 551 ~It~i~fspdg~~La-tgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~ 629 (784)
...++++++++++++ +...++.|.+||..+... ......+...+.++++.+++. ++++.. ++.|.+||........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-TVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSCCEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc-ceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCceEee
Confidence 678999999998766 446789999999866442 222223335678999999877 666555 8899999988654433
Q ss_pred eec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC-CeEEEEeCCCC
Q 047260 630 ITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ-NLVKVWSMASG 705 (784)
Q Consensus 630 ~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd-d~I~IwDl~t~ 705 (784)
... ..+..+++++++..+++...++.|.+||..+.............+.+++++++|+++++... +.|.+||....
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 221 45788999999875555556789999987655443322233346788999999997776654 49999998877
Q ss_pred ceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEec-ccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 706 ECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIA-AHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 706 ~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~-~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
............+..+++++++..+++...++.|.+||.......... .+...+.+++++++++++++...+++|++|+
T Consensus 182 ~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 182 NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 654433333367889999999966666666789999999776554333 3346789999999999888888899999985
No 194
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=6e-13 Score=158.99 Aligned_cols=265 Identities=7% Similarity=-0.006 Sum_probs=180.6
Q ss_pred CCCCEEEEEeCCC-----eEEEEECCCCceeeec------CCCCCCeEEEEEccCCCEEEEEeCCC-----eEEEEcCCC
Q 047260 517 SDGKLLASSGHDR-----KVVLWNMDTLQTESTP------EDHKSVVTDVRFRPNSSQLATASVDK-----SVRLWDAAN 580 (784)
Q Consensus 517 pdg~~Lasgs~Dg-----~I~IWd~~t~~~~~~l------~~h~~~It~i~fspdg~~Latgs~Dg-----~I~IWdl~~ 580 (784)
|+|++++....++ .|.+.+...++....+ .+|...+..++|+|||++|+.++.++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 7888877654332 3455554444332221 23445688999999999998876644 899999998
Q ss_pred CcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCC---------------eEEEEeCCCCee--EEeec-----CCeeEE
Q 047260 581 PNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDN---------------EIQYWSINPFLC--THITK-----GGTAQV 638 (784)
Q Consensus 581 ~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg---------------~I~iwDl~~~~~--~~~~~-----~~v~~v 638 (784)
++........ ..+..++|+||+..++++..... .|++|++.+... ...+. ..+..+
T Consensus 161 g~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 161 AKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCcccccC--cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 7743322222 23678999999987666654322 399999987542 22222 235788
Q ss_pred EEecCCCEEEEEEC-----CCcEEEEECCC------Ce-EEEEEeCCCCCEEEEEEcCCCCEEEEEeC-C----eEEEEe
Q 047260 639 RFQPRIGQLLAAAS-----DKVVSIFDIET------DR-QTHSLQGHAELVNYICWDTNGDYLASVSQ-N----LVKVWS 701 (784)
Q Consensus 639 ~fsp~~~~Ll~~s~-----Dg~I~IwDl~t------~~-~i~~l~~h~~~V~sl~~spdg~~Lasgsd-d----~I~IwD 701 (784)
.|+|++++|+.++. +..|++||+.+ +. ....+..+...+.. .|+++|..|+..++ + .|.+||
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 99999999988775 56899999986 43 45566666666655 48889887776653 2 699999
Q ss_pred CCCCc--eEEEeccCCC--ceEEEEEecCCCEEEEEECCC--eEEEEECCCCceE-EecccCCceEEEEEeCCCCEEEEE
Q 047260 702 MASGE--CIQELSSNGN--QFHSCVFHPSYSTLLVVGGIS--SLELWNMAENKSM-TIAAHENIISALAQSPVTGMVASA 774 (784)
Q Consensus 702 l~t~~--~i~~l~~~~~--~I~sl~fspdg~~L~s~s~dg--~I~Iwdl~~~~~~-~~~~h~~~V~slafspdg~~LaSg 774 (784)
+.++. ....+..+.. .+..+.|++++..+++...++ .|.+||+.+++.. .+..+.+.|..++++|++..|+..
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE
Confidence 98874 2344544433 678889997777777777787 4777888666643 566678889999999998755533
Q ss_pred -EC---CCcEEEeC
Q 047260 775 -SH---DSSVKLWK 784 (784)
Q Consensus 775 -s~---DG~V~IWd 784 (784)
+. .+.|++||
T Consensus 398 ~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 398 FTSFLSPGIIYHCD 411 (710)
T ss_dssp EECSSCCCEEEEEE
T ss_pred EeCCCCCCEEEEEE
Confidence 32 45677775
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=6.6e-12 Score=138.46 Aligned_cols=265 Identities=8% Similarity=-0.019 Sum_probs=183.0
Q ss_pred EcCCCCEEEEEeC--CC---eEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEe----------CCCeEEEEcCC
Q 047260 515 FSSDGKLLASSGH--DR---KVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATAS----------VDKSVRLWDAA 579 (784)
Q Consensus 515 fspdg~~Lasgs~--Dg---~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs----------~Dg~I~IWdl~ 579 (784)
..|++++++++.. .. .|.+||..+++.+..+.....+ .++|+||+++|+++. .++.|.+||..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3467777766653 22 8899999999998888655444 999999999999886 36789999998
Q ss_pred CCcceeeeccC------CCCCeEEEEEcCCCCcEEEEEeC-CCeEEEEeCCCCeeEEe-ecCCeeEEEEecCCC-EEEEE
Q 047260 580 NPNFCSQAYTG------HSSPIMSLDFHPKKTDLFCFCDN-DNEIQYWSINPFLCTHI-TKGGTAQVRFQPRIG-QLLAA 650 (784)
Q Consensus 580 ~~~~~~~~~~~------h~~~V~sl~~sp~~~~ll~sgs~-dg~I~iwDl~~~~~~~~-~~~~v~~v~fsp~~~-~Ll~~ 650 (784)
+.+.......+ +......+.|+|++++++++... ++.|.++| .+.+.+.. ...+. ++.+.|++. .+++.
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-~~~~~~~~~~~~~~~ 183 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-CYHIHPGAPSTFYLL 183 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-eEEEEeCCCceEEEE
Confidence 76633222111 01235689999999987777654 68899999 98887766 55433 355666664 45566
Q ss_pred ECCCcEEEEECCCCeEEEEEe-----CCCCC-EEEEEEcCCCC-EEEEEeCCeEEEEeCCCCc--eEEEeccC-------
Q 047260 651 ASDKVVSIFDIETDRQTHSLQ-----GHAEL-VNYICWDTNGD-YLASVSQNLVKVWSMASGE--CIQELSSN------- 714 (784)
Q Consensus 651 s~Dg~I~IwDl~t~~~i~~l~-----~h~~~-V~sl~~spdg~-~Lasgsdd~I~IwDl~t~~--~i~~l~~~------- 714 (784)
+.||.+.++|. +++.+.... ....+ .....+.+++. ++++..++.|.+.|+.... .+..+...
T Consensus 184 ~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~ 262 (373)
T 2mad_H 184 CAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKAD 262 (373)
T ss_pred cCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccccc
Confidence 67999999999 877663322 11122 12344555544 4444445689999997652 23333211
Q ss_pred ---CCceEEEEEecCCCEEEEEEC----------CCeEEEEECCCCceEEecccCCceEEEEEeCCCC-EEEEEE-CCCc
Q 047260 715 ---GNQFHSCVFHPSYSTLLVVGG----------ISSLELWNMAENKSMTIAAHENIISALAQSPVTG-MVASAS-HDSS 779 (784)
Q Consensus 715 ---~~~I~sl~fspdg~~L~s~s~----------dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs-~DG~ 779 (784)
......+.++|+++.++++.. .+.|.++|+.+++.+..........+++|+||++ +++++. .++.
T Consensus 263 ~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~ 342 (373)
T 2mad_H 263 TWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEV 342 (373)
T ss_pred ceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCe
Confidence 122344788999998888754 3579999999998874444555789999999999 788877 4899
Q ss_pred EEEeC
Q 047260 780 VKLWK 784 (784)
Q Consensus 780 V~IWd 784 (784)
|.|||
T Consensus 343 V~ViD 347 (373)
T 2mad_H 343 LHIYD 347 (373)
T ss_pred EEEEE
Confidence 99986
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.55 E-value=1.3e-12 Score=138.02 Aligned_cols=210 Identities=12% Similarity=0.047 Sum_probs=163.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecCCCC-CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCC-CCCe
Q 047260 518 DGKLLASSGHDRKVVLWNMDTLQTESTPEDHK-SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGH-SSPI 595 (784)
Q Consensus 518 dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~-~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h-~~~V 595 (784)
.+++|++++.|+.|.+||.++++.+..+..+. ..+.++.+.|+|++|+ +.++.|..||. +++ .+..+..+ ...+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~-~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR-ELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC-EEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC-EEEEEcCCCCccc
Confidence 46789999999999999999999999998776 5789999999999888 45788999999 666 44444443 3578
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---------CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeE
Q 047260 596 MSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---------GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQ 666 (784)
Q Consensus 596 ~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---------~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~ 666 (784)
.++.+.+++..+++.+..++.|..+|.+ ++.+..+. .....+.+.++++++++...++.|.+||.+ ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 8999999998544434337788888864 44443332 123456788999999988889999999998 999
Q ss_pred EEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCC------CceEEEEEecCCCEEEEEE
Q 047260 667 THSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNG------NQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 667 i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~------~~I~sl~fspdg~~L~s~s 734 (784)
+..+... ..+.++.+.++|.+++++.++ .|..+|..+|+.+.++..+. ..+..+...+++..+++..
T Consensus 158 ~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9988754 345567888999999988876 89999999999999986432 2367888889998777764
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.54 E-value=6.3e-12 Score=133.12 Aligned_cols=239 Identities=10% Similarity=0.098 Sum_probs=170.2
Q ss_pred ecCCCceEEEEEcCCCCEEEE-------EeCCCeEEEEECCCCceeeecC----CCCCCeEEEEEccC-CCEEEEEeCCC
Q 047260 504 RSRNSKVTCCHFSSDGKLLAS-------SGHDRKVVLWNMDTLQTESTPE----DHKSVVTDVRFRPN-SSQLATASVDK 571 (784)
Q Consensus 504 ~~H~~~V~~l~fspdg~~Las-------gs~Dg~I~IWd~~t~~~~~~l~----~h~~~It~i~fspd-g~~Latgs~Dg 571 (784)
...-....+++|++++.++++ +..++.|.+||..+++...... ++...+.+++++++ ++++++ +.+.
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCC
Confidence 344456789999999988877 5778899999988777643322 24567999999998 654444 4455
Q ss_pred eEEEEcCCCCcceeee-ccC----CCCCeEEEEEcCCCCcEEEEEeCC---------------CeEEEEeCCCCeeEEe-
Q 047260 572 SVRLWDAANPNFCSQA-YTG----HSSPIMSLDFHPKKTDLFCFCDND---------------NEIQYWSINPFLCTHI- 630 (784)
Q Consensus 572 ~I~IWdl~~~~~~~~~-~~~----h~~~V~sl~~sp~~~~ll~sgs~d---------------g~I~iwDl~~~~~~~~- 630 (784)
.|.+||.+ ++ .... ... ....+.++++++++. ++++...+ +.|..||.. .+....
T Consensus 93 ~l~~~d~~-g~-~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 93 GLLVVQTD-GT-FEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp EEEEEETT-SC-EEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CEEEEeCC-CC-EEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 79999988 55 2222 111 124588999999986 55555444 577888776 433322
Q ss_pred -ecCCeeEEEEe----cCCCEEEEEEC-CCcEEEEECC-CCe-----EEEEEeCCC-CCEEEEEEcCCCCEEEEEe-CCe
Q 047260 631 -TKGGTAQVRFQ----PRIGQLLAAAS-DKVVSIFDIE-TDR-----QTHSLQGHA-ELVNYICWDTNGDYLASVS-QNL 696 (784)
Q Consensus 631 -~~~~v~~v~fs----p~~~~Ll~~s~-Dg~I~IwDl~-t~~-----~i~~l~~h~-~~V~sl~~spdg~~Lasgs-dd~ 696 (784)
.......++++ ++++.++++.. ++.|.+||+. +++ ....+..+. ..+..++++++|.++++.. ++.
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 22456788999 99877777654 7899999986 443 222333343 5688999999999888775 459
Q ss_pred EEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEEC-CCeEEEEECCCC
Q 047260 697 VKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGG-ISSLELWNMAEN 747 (784)
Q Consensus 697 I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~-dg~I~Iwdl~~~ 747 (784)
|.+||..+++.+..+..+...+.+++|++++..|++++. ++.|..|++...
T Consensus 249 i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 999999878877777766678999999999996666654 578999998753
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.51 E-value=3e-11 Score=126.38 Aligned_cols=233 Identities=6% Similarity=0.003 Sum_probs=168.7
Q ss_pred CCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe
Q 047260 547 DHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL 626 (784)
Q Consensus 547 ~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~ 626 (784)
.+...+.++++.++++++++...++.|.+||.. +.........+...+.++++.+++. ++++...++.|..||.....
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKKGII 89 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTSCE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCCCcE
Confidence 455679999999999877776668999999988 5533222233456799999999876 66666668899999987332
Q ss_pred eEEee---cCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE-EeCCCCCEEEEEEcCCCCEEEEEeC-CeEEEEe
Q 047260 627 CTHIT---KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS-LQGHAELVNYICWDTNGDYLASVSQ-NLVKVWS 701 (784)
Q Consensus 627 ~~~~~---~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~-l~~h~~~V~sl~~spdg~~Lasgsd-d~I~IwD 701 (784)
..... ...+..+++.+++..+++...++.|.+||. +++.... +......+..++++++|.++++... +.|.+||
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 22221 235788999998876666556889999998 5544332 2334567899999999988877664 4999999
Q ss_pred CCCCceEEE-eccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEe--cccCCceEEEEEeCCCCEEEEEECCC
Q 047260 702 MASGECIQE-LSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTI--AAHENIISALAQSPVTGMVASASHDS 778 (784)
Q Consensus 702 l~t~~~i~~-l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~DG 778 (784)
. +++.... +......+..+++++++..+++...++.|.+||. +++...+ ..+...+.+++++++++++++...++
T Consensus 169 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 246 (299)
T 2z2n_A 169 E-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGAN 246 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred C-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCc
Confidence 9 6665432 3334556889999999886655556789999999 6655433 33556799999999998777665678
Q ss_pred cEEEeC
Q 047260 779 SVKLWK 784 (784)
Q Consensus 779 ~V~IWd 784 (784)
.|.+||
T Consensus 247 ~i~~~d 252 (299)
T 2z2n_A 247 KIGRLT 252 (299)
T ss_dssp EEEEEE
T ss_pred eEEEEC
Confidence 888775
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=7.6e-13 Score=157.73 Aligned_cols=263 Identities=9% Similarity=-0.042 Sum_probs=170.9
Q ss_pred cCCCCEEEEEeCCC-----eEEEEECCCCceeeec------CCCCCCeEEEEEccCCCEEEEE-----eCCCeEEEEcCC
Q 047260 516 SSDGKLLASSGHDR-----KVVLWNMDTLQTESTP------EDHKSVVTDVRFRPNSSQLATA-----SVDKSVRLWDAA 579 (784)
Q Consensus 516 spdg~~Lasgs~Dg-----~I~IWd~~t~~~~~~l------~~h~~~It~i~fspdg~~Latg-----s~Dg~I~IWdl~ 579 (784)
+|+|++++....++ .|.+.+...+.....+ .+|...+..++|+|||++||.+ +.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37898887766543 3455555444433222 2466679999999999999843 445689999999
Q ss_pred CCcce-eeeccCCCCCeEEEEEcCCCCcEEEEEeCCCe-------------EEEEeCCCCe----eEEeec---CCeeEE
Q 047260 580 NPNFC-SQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNE-------------IQYWSINPFL----CTHITK---GGTAQV 638 (784)
Q Consensus 580 ~~~~~-~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~-------------I~iwDl~~~~----~~~~~~---~~v~~v 638 (784)
+++.. ...+... ....++|+|++..++++. .+.. |++|++.+.. .+.... ..+..+
T Consensus 156 tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~-~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 156 SGEWSKVDVIEGG--KYATPKWTPDSKGFYYEW-LPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp TCCBCSSCCBSCC--TTCCCEECTTSSEEEEEE-CCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred CCCCcCCcccCcc--cccceEEecCCCEEEEEE-ecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 87743 1122211 126899999998655554 4443 9999998754 222221 356789
Q ss_pred EEecCCCEEEEEECCC----cEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe----CCeEEEEeCCCCce---
Q 047260 639 RFQPRIGQLLAAASDK----VVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS----QNLVKVWSMASGEC--- 707 (784)
Q Consensus 639 ~fsp~~~~Ll~~s~Dg----~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs----dd~I~IwDl~t~~~--- 707 (784)
.|+|+|++|++++.++ .|.++|..+++. ..+..+...+....| ++|.+++... +..|.+||+.++..
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASW 310 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCC
Confidence 9999999998888765 677777665543 344445556666666 5566444443 13899999988753
Q ss_pred EEEeccC-CCceEEEEEecCCCEEEEEECCCeEEEEECC-CCc-eEEeccc-CCceEEEEEeCCCCEEEEEE----CCCc
Q 047260 708 IQELSSN-GNQFHSCVFHPSYSTLLVVGGISSLELWNMA-ENK-SMTIAAH-ENIISALAQSPVTGMVASAS----HDSS 779 (784)
Q Consensus 708 i~~l~~~-~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~-~~~-~~~~~~h-~~~V~slafspdg~~LaSgs----~DG~ 779 (784)
...+..+ ...+..++|+ ++..+++...|+..+||.+. ++. ...+..+ .+.|..++++|++..|+... ..+.
T Consensus 311 ~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 389 (695)
T 2bkl_A 311 KEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ 389 (695)
T ss_dssp EEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE
T ss_pred eEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 3333333 4567888888 66677788888877766543 233 3344444 67788899999987666332 2467
Q ss_pred EEEeC
Q 047260 780 VKLWK 784 (784)
Q Consensus 780 V~IWd 784 (784)
|++||
T Consensus 390 v~~~d 394 (695)
T 2bkl_A 390 IYKTS 394 (695)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88775
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.50 E-value=4.4e-11 Score=131.85 Aligned_cols=233 Identities=10% Similarity=0.052 Sum_probs=169.2
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEECCCCceeeecCCC-------CCCeEEEEEccCCCEEEEEeC--CCe
Q 047260 512 CCHFSSDGKLLASSG----------HDRKVVLWNMDTLQTESTPEDH-------KSVVTDVRFRPNSSQLATASV--DKS 572 (784)
Q Consensus 512 ~l~fspdg~~Lasgs----------~Dg~I~IWd~~t~~~~~~l~~h-------~~~It~i~fspdg~~Latgs~--Dg~ 572 (784)
.++|+|||++|+++. .++.|.+||..+++.+..+... ......+.|+|||++|++++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998886 3678999999998887766422 123458999999999999874 478
Q ss_pred EEEEcCCCCcceeee-ccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec--------CCe-eEEEEec
Q 047260 573 VRLWDAANPNFCSQA-YTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK--------GGT-AQVRFQP 642 (784)
Q Consensus 573 I~IWdl~~~~~~~~~-~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~--------~~v-~~v~fsp 642 (784)
|.++| .+++ .... +.. . .|+.+.|++...+++.+.||.+.++|. +.+...... .++ ....+.+
T Consensus 150 v~viD-~t~~-~~~~~i~~-~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 150 VGLVV-QGGS-SDDQLLSS-P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred EEEEE-CCCC-EEeEEcCC-C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 99999 8876 3333 321 1 235666777777888888999999999 665552211 111 2235667
Q ss_pred CCCEEEEEECCCcEEEEECCCC--eEEEEEeC----------CCCCEEEEEEcCCCCEEEEEeC-----------CeEEE
Q 047260 643 RIGQLLAAASDKVVSIFDIETD--RQTHSLQG----------HAELVNYICWDTNGDYLASVSQ-----------NLVKV 699 (784)
Q Consensus 643 ~~~~Ll~~s~Dg~I~IwDl~t~--~~i~~l~~----------h~~~V~sl~~spdg~~Lasgsd-----------d~I~I 699 (784)
++..++..+.++.|.++|+... +.+..+.. .......+.++++++.+++..+ +.|.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 7777666667889999999765 22333321 1123445788999888777542 37999
Q ss_pred EeCCCCceEEEeccCCCceEEEEEecCCC-EEEEEE-CCCeEEEEECCCCceEEe
Q 047260 700 WSMASGECIQELSSNGNQFHSCVFHPSYS-TLLVVG-GISSLELWNMAENKSMTI 752 (784)
Q Consensus 700 wDl~t~~~i~~l~~~~~~I~sl~fspdg~-~L~s~s-~dg~I~Iwdl~~~~~~~~ 752 (784)
+|+.+++.+.++... .....++|+||++ .++++. .++.|.+||+.+++.+..
T Consensus 303 ID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 303 VTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 999999999998644 4579999999999 677776 478999999999988744
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.50 E-value=5.9e-12 Score=138.37 Aligned_cols=261 Identities=11% Similarity=0.114 Sum_probs=178.0
Q ss_pred EEeEeecCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCceeeecCCC-------CCCeEEEEEccCC
Q 047260 499 EVGCIRSRNSKVTCCHFSSDGKLLASSG----------HDRKVVLWNMDTLQTESTPEDH-------KSVVTDVRFRPNS 561 (784)
Q Consensus 499 ~i~~l~~H~~~V~~l~fspdg~~Lasgs----------~Dg~I~IWd~~t~~~~~~l~~h-------~~~It~i~fspdg 561 (784)
.+..+..-..+ . ++++|||++|+++. .++.|.+||..+++.+..+... ......+.|+|||
T Consensus 71 v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDG 148 (386)
T 3sjl_D 71 VIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDG 148 (386)
T ss_dssp EEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTS
T ss_pred EEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCC
Confidence 34444444444 4 99999999887765 3678999999999988877422 1245679999999
Q ss_pred CEEEEEeC--CCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-CeeEEeec------
Q 047260 562 SQLATASV--DKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP-FLCTHITK------ 632 (784)
Q Consensus 562 ~~Latgs~--Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~-~~~~~~~~------ 632 (784)
++|+++.. ++.|.++|+.+.+. ...+.-. + |..+.|.+...+++.+.||.+.+.++.+ .+......
T Consensus 149 k~lyVan~~~~~~VsVID~~t~~v-v~tI~v~-g---~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~ 223 (386)
T 3sjl_D 149 KTLLFYQFSPAPAVGVVDLEGKAF-KRMLDVP-D---CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE 223 (386)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEE-EEEEECC-S---EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT
T ss_pred CEEEEEEcCCCCeEEEEECCCCcE-EEEEECC-C---cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccc
Confidence 99998874 68999999999773 3333221 1 1233455555666777789999998875 44322111
Q ss_pred -CCe-eEEEEecCCCEEEEEECCCcEEEEECCCCe--EEEEEe---------C-CCCCEEEEEEcCCCCEEEEEeC----
Q 047260 633 -GGT-AQVRFQPRIGQLLAAASDKVVSIFDIETDR--QTHSLQ---------G-HAELVNYICWDTNGDYLASVSQ---- 694 (784)
Q Consensus 633 -~~v-~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~--~i~~l~---------~-h~~~V~sl~~spdg~~Lasgsd---- 694 (784)
.++ ....|.+..+.++..+.+|.|+++|+.... .+..+. + ....+..+++++++..+++...
T Consensus 224 ~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 224 DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT
T ss_pred cccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccc
Confidence 111 123554333455556778999999997653 333332 0 1123334777899888877642
Q ss_pred -------CeEEEEeCCCCceEEEeccCCCceEEEEEecCCC-EEEEEEC-CCeEEEEECCCCceEEecccCCceEEEEEe
Q 047260 695 -------NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYS-TLLVVGG-ISSLELWNMAENKSMTIAAHENIISALAQS 765 (784)
Q Consensus 695 -------d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~-~L~s~s~-dg~I~Iwdl~~~~~~~~~~h~~~V~slafs 765 (784)
+.|.++|+.+++.+..+... ..+..|.++++++ +|+++.. ++.|.++|..+++.+......+..+.|.++
T Consensus 304 ~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s 382 (386)
T 3sjl_D 304 WRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITT 382 (386)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEE
T ss_pred cccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEEC
Confidence 37999999999999988754 3678999999997 6666554 789999999999988555555555566666
Q ss_pred CC
Q 047260 766 PV 767 (784)
Q Consensus 766 pd 767 (784)
+|
T Consensus 383 ~d 384 (386)
T 3sjl_D 383 AD 384 (386)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.47 E-value=1.5e-12 Score=156.44 Aligned_cols=242 Identities=13% Similarity=0.034 Sum_probs=163.4
Q ss_pred CCCceEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCe--------
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHD-----RKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKS-------- 572 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~D-----g~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~-------- 572 (784)
|...+..++|||||++||.+..+ ..|++||+.+++.+... .+...+..++|+|| +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44468899999999999887654 46999999998876532 12222357899999 99998887654
Q ss_pred ------EEEEcCCCCcc---eeeeccCCCCCeEEEEEcCCCCcEEEEEeC----CCeEEEEeCCCC--e-eEEe--ecCC
Q 047260 573 ------VRLWDAANPNF---CSQAYTGHSSPIMSLDFHPKKTDLFCFCDN----DNEIQYWSINPF--L-CTHI--TKGG 634 (784)
Q Consensus 573 ------I~IWdl~~~~~---~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~----dg~I~iwDl~~~--~-~~~~--~~~~ 634 (784)
|++|++.++.. .+.....+...+..+.|+|++..+++++.. ...|++||+.+. . .... ....
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 88999977552 222222333458899999999977776653 348999999765 3 2222 2233
Q ss_pred eeEEEEecCCCEEEEEECC----CcEEEEECCCC--eEEEEEeCCCCCEEEEEEcCCCCEEEEEe-CCeE--EEEeCCCC
Q 047260 635 TAQVRFQPRIGQLLAAASD----KVVSIFDIETD--RQTHSLQGHAELVNYICWDTNGDYLASVS-QNLV--KVWSMASG 705 (784)
Q Consensus 635 v~~v~fsp~~~~Ll~~s~D----g~I~IwDl~t~--~~i~~l~~h~~~V~sl~~spdg~~Lasgs-dd~I--~IwDl~t~ 705 (784)
.... +.|+++.|+..+.+ +.|.+||+.++ .....+..+...+..++|+ ++.++++.. ++.. .++++ ++
T Consensus 319 ~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~-~g 395 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL-DG 395 (741)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET-TS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC-CC
Confidence 3333 45899998888763 45999999874 3344444455567778887 555666665 4454 44554 45
Q ss_pred ceEEEeccC-CCceEEEEEecCCCEEEEEEC----CCeEEEEECCCCceEEe
Q 047260 706 ECIQELSSN-GNQFHSCVFHPSYSTLLVVGG----ISSLELWNMAENKSMTI 752 (784)
Q Consensus 706 ~~i~~l~~~-~~~I~sl~fspdg~~L~s~s~----dg~I~Iwdl~~~~~~~~ 752 (784)
..+..+..+ ...+..+.++|++..|+.... .++|++||+.+++...+
T Consensus 396 ~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 396 KPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp CEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred CceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 666666643 567888999999876664433 26899999988765433
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.47 E-value=1.8e-11 Score=129.51 Aligned_cols=232 Identities=11% Similarity=0.042 Sum_probs=160.9
Q ss_pred CCCeEEEEEccCCCEEEE-------EeCCCeEEEEcCCCCcceeeec---cCCCCCeEEEEEcCCCCcEEEEEeCCCeEE
Q 047260 549 KSVVTDVRFRPNSSQLAT-------ASVDKSVRLWDAANPNFCSQAY---TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQ 618 (784)
Q Consensus 549 ~~~It~i~fspdg~~Lat-------gs~Dg~I~IWdl~~~~~~~~~~---~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~ 618 (784)
-....+++|++++.++++ +..++.|.+||..+++...... .++...+.++++++++..++++.. +..|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEE
Confidence 345689999999987777 5778999999987766322111 124467899999998333555444 45799
Q ss_pred EEeCCCCeeEEe-ec-------CCeeEEEEecCCCEEEEEECC---------------CcEEEEECCCCeEEEEEeCCCC
Q 047260 619 YWSINPFLCTHI-TK-------GGTAQVRFQPRIGQLLAAASD---------------KVVSIFDIETDRQTHSLQGHAE 675 (784)
Q Consensus 619 iwDl~~~~~~~~-~~-------~~v~~v~fsp~~~~Ll~~s~D---------------g~I~IwDl~t~~~i~~l~~h~~ 675 (784)
+||.+ .+.... .. ..+..+++++++..+++...+ +.|..||.. ++..... .+..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQ 172 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEES
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCC
Confidence 99988 555433 21 236789999998766665544 567778766 5443332 2344
Q ss_pred CEEEEEEc----CCCCEEEEEe--CCeEEEEeCC-CCc-----eEEEeccCC-CceEEEEEecCCCEEEEEECCCeEEEE
Q 047260 676 LVNYICWD----TNGDYLASVS--QNLVKVWSMA-SGE-----CIQELSSNG-NQFHSCVFHPSYSTLLVVGGISSLELW 742 (784)
Q Consensus 676 ~V~sl~~s----pdg~~Lasgs--dd~I~IwDl~-t~~-----~i~~l~~~~-~~I~sl~fspdg~~L~s~s~dg~I~Iw 742 (784)
....++|+ ++++.|+++. ++.|.+||+. +++ ....+..+. ..+..+++++++..+++...++.|.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 56889999 9997665554 3599999986 443 223333333 567889999999877777788899999
Q ss_pred ECCCCceE-EecccCCceEEEEEeCCCCEEEEE-ECCCcEEEeC
Q 047260 743 NMAENKSM-TIAAHENIISALAQSPVTGMVASA-SHDSSVKLWK 784 (784)
Q Consensus 743 dl~~~~~~-~~~~h~~~V~slafspdg~~LaSg-s~DG~V~IWd 784 (784)
|..+++.. .+..+...+.+++|+++++.|+.+ ..++.|..|+
T Consensus 253 d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence 99866554 444566789999999999955544 4567787764
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.44 E-value=1.8e-11 Score=129.19 Aligned_cols=208 Identities=11% Similarity=0.073 Sum_probs=161.7
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCcceeeeccCCC-CCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecC----C
Q 047260 560 NSSQLATASVDKSVRLWDAANPNFCSQAYTGHS-SPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKG----G 634 (784)
Q Consensus 560 dg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~-~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~----~ 634 (784)
.+++|++++.|+.|.+||.++++ .+..+..+. ..+.++.+.|++. +++ +.++.|..||. +++.+..+.. .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~-~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE-IVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE-EEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCe-EEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 46789999999999999998887 445555544 4788999999987 555 34788999999 6666666552 4
Q ss_pred eeEEEEecCCCEEEEEEC-CCcEEEEECCCCeEEEEEeC------CCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCc
Q 047260 635 TAQVRFQPRIGQLLAAAS-DKVVSIFDIETDRQTHSLQG------HAELVNYICWDTNGDYLASVSQN-LVKVWSMASGE 706 (784)
Q Consensus 635 v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~------h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~ 706 (784)
+.++.+.++++.+++.+. ++.|..+|. +++.+..+.. +......+++.++|.+|++...+ .|.+||.. |+
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 667889999999999887 788888886 6777776652 11234556788999999988755 99999998 99
Q ss_pred eEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccC------CceEEEEEeCCCCEEEEEE
Q 047260 707 CIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHE------NIISALAQSPVTGMVASAS 775 (784)
Q Consensus 707 ~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~------~~V~slafspdg~~LaSgs 775 (784)
.+.++... ..+.++.+.+++..++++..++.|..||..+++.+ .+..+. ..+..++..++|.++++..
T Consensus 157 ~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 157 LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 99998765 45567888999998988888889999999988887 333221 2378888999999888773
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.44 E-value=1.4e-11 Score=137.45 Aligned_cols=265 Identities=8% Similarity=0.059 Sum_probs=185.2
Q ss_pred CCCCEEEEEeCC-----CeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEe----------CCCeEEEEcCCCC
Q 047260 517 SDGKLLASSGHD-----RKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATAS----------VDKSVRLWDAANP 581 (784)
Q Consensus 517 pdg~~Lasgs~D-----g~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs----------~Dg~I~IWdl~~~ 581 (784)
++++.++++... +.|.++|..+++.+..+..-..+ .+.++||+++|+++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 466666655542 69999999999999998765555 899999999998886 3678999999987
Q ss_pred cceeeeccC------CCCCeEEEEEcCCCCcEEEEEeC-CCeEEEEeCCCCeeEEeecCCeeEEEEecCC-CEEEEEECC
Q 047260 582 NFCSQAYTG------HSSPIMSLDFHPKKTDLFCFCDN-DNEIQYWSINPFLCTHITKGGTAQVRFQPRI-GQLLAAASD 653 (784)
Q Consensus 582 ~~~~~~~~~------h~~~V~sl~~sp~~~~ll~sgs~-dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~-~~Ll~~s~D 653 (784)
+.......+ .......+.|+|++++++++... ++.|.+.|+.+.+.+..+.-+-. ....|++ ..+++.+.|
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-YHIFPASPTVFYMNCRD 238 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEETT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-eeeccCCCcEEEEEcCC
Confidence 743333222 11345678999999977777654 78999999999888877664322 3344443 556777789
Q ss_pred CcEEEEECCCCeEEEE----EeCCCCCE-EEEEEcCCCCEEEEEe-CCeEEEEeCCCCceE--EEecc---C-------C
Q 047260 654 KVVSIFDIETDRQTHS----LQGHAELV-NYICWDTNGDYLASVS-QNLVKVWSMASGECI--QELSS---N-------G 715 (784)
Q Consensus 654 g~I~IwDl~t~~~i~~----l~~h~~~V-~sl~~spdg~~Lasgs-dd~I~IwDl~t~~~i--~~l~~---~-------~ 715 (784)
|.+.+.++.+++.... +.....++ ..+.+.+++..++..+ .+.|.+.|+...... ..+.. . .
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 9999999866655432 11111121 2356788887766655 449999998765421 11110 0 0
Q ss_pred CceEEEEEecCCCEEEEEEC----------CCeEEEEECCCCceEEecccCCceEEEEEeCCCC-EEEEEE-CCCcEEEe
Q 047260 716 NQFHSCVFHPSYSTLLVVGG----------ISSLELWNMAENKSMTIAAHENIISALAQSPVTG-MVASAS-HDSSVKLW 783 (784)
Q Consensus 716 ~~I~sl~fspdg~~L~s~s~----------dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs-~DG~V~IW 783 (784)
.....++++|+++.+++... ++.|.++|+.+.+.+....-.....+++|+||++ +++++. .++.|.|+
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 11223689999998887753 3579999999999884443344688999999999 888888 48999998
Q ss_pred C
Q 047260 784 K 784 (784)
Q Consensus 784 d 784 (784)
|
T Consensus 399 D 399 (426)
T 3c75_H 399 D 399 (426)
T ss_dssp E
T ss_pred E
Confidence 6
No 206
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.42 E-value=1.3e-11 Score=148.18 Aligned_cols=264 Identities=11% Similarity=0.029 Sum_probs=168.7
Q ss_pred cCCCCEEEEEeCCCe---EEEE--ECC---CCceeee------cCCCCCCeEEEEEccCCCEEEEEeCC-----CeEEEE
Q 047260 516 SSDGKLLASSGHDRK---VVLW--NMD---TLQTEST------PEDHKSVVTDVRFRPNSSQLATASVD-----KSVRLW 576 (784)
Q Consensus 516 spdg~~Lasgs~Dg~---I~IW--d~~---t~~~~~~------l~~h~~~It~i~fspdg~~Latgs~D-----g~I~IW 576 (784)
+|||++++....++. -.|| +.. .+..... -.+|...+..++|+|||++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 388998877654432 4445 443 3332221 12344478899999999999887654 469999
Q ss_pred cCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCC-------------eEEEEeCCCCe----eEEeecC---Cee
Q 047260 577 DAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDN-------------EIQYWSINPFL----CTHITKG---GTA 636 (784)
Q Consensus 577 dl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg-------------~I~iwDl~~~~----~~~~~~~---~v~ 636 (784)
|+.+++...... +...+..++|+|+ ..++++...+. .|++|++.+.. .+..... .+.
T Consensus 195 dl~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~ 271 (741)
T 1yr2_A 195 GVADGKPLADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH 271 (741)
T ss_dssp ETTTCCEEEEEE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred ECCCCCCCCccC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence 999877432211 1122357899999 76666654332 48999997644 2222222 367
Q ss_pred EEEEecCCCEEEEEECCC-----cEEEEECCCC--eEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC-----eEEEEeCCC
Q 047260 637 QVRFQPRIGQLLAAASDK-----VVSIFDIETD--RQTHSLQGHAELVNYICWDTNGDYLASVSQN-----LVKVWSMAS 704 (784)
Q Consensus 637 ~v~fsp~~~~Ll~~s~Dg-----~I~IwDl~t~--~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd-----~I~IwDl~t 704 (784)
.+.|+|+|++|+..+.++ .|++||+.++ +....+..+...+.... +|+|..|+..++. .|.+||+.+
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 889999999988877543 8999999877 31455555555555554 4888888777632 699999987
Q ss_pred C--ceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEE--ECCCCceEEecc-cCCceEEEEEeCCCCEEE-EEE---
Q 047260 705 G--ECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELW--NMAENKSMTIAA-HENIISALAQSPVTGMVA-SAS--- 775 (784)
Q Consensus 705 ~--~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iw--dl~~~~~~~~~~-h~~~V~slafspdg~~La-Sgs--- 775 (784)
+ .....+..+...+..+.|. ++..+++...++..+|| ++..+....+.. +.+.|..++++|++..|+ +.+
T Consensus 351 ~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 429 (741)
T 1yr2_A 351 STPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFT 429 (741)
T ss_dssp SSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred CccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 5 3344444444556677777 55567777778866655 543333334443 467789999999987554 332
Q ss_pred CCCcEEEeC
Q 047260 776 HDSSVKLWK 784 (784)
Q Consensus 776 ~DG~V~IWd 784 (784)
..+.|++||
T Consensus 430 ~P~~i~~~d 438 (741)
T 1yr2_A 430 QPATVLALD 438 (741)
T ss_dssp EEEEEEEEE
T ss_pred CCCEEEEEE
Confidence 246777775
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.41 E-value=1.5e-10 Score=129.07 Aligned_cols=230 Identities=10% Similarity=0.081 Sum_probs=164.2
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCC--eEEEEcCCCCccee
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDK--SVRLWDAANPNFCS 585 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg--~I~IWdl~~~~~~~ 585 (784)
.....++|+++++++++...++.|++||.+++.......... ... ++|+++++.|+++..++ .|.+|+...... .
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-P 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-E
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-e
Confidence 468899999999977777778999999999877665554433 333 99999999999988866 788888775442 2
Q ss_pred eec----cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe----ec---CCe-e-EEEEecCCCEEEEEEC
Q 047260 586 QAY----TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI----TK---GGT-A-QVRFQPRIGQLLAAAS 652 (784)
Q Consensus 586 ~~~----~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~----~~---~~v-~-~v~fsp~~~~Ll~~s~ 652 (784)
..+ ......+.+++++|++..+++ +..++.|+.||......... .. ... . .++|+|+++.|+++..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 222 224466788999996565665 67789999999986654332 11 111 2 8999997677776665
Q ss_pred -CCcEEEEECCCCeEEEEEeCCC---------------CCEEEEEEcCCCCEEEEEe-CC-eEEEEeCCCCceEEEeccC
Q 047260 653 -DKVVSIFDIETDRQTHSLQGHA---------------ELVNYICWDTNGDYLASVS-QN-LVKVWSMASGECIQELSSN 714 (784)
Q Consensus 653 -Dg~I~IwDl~t~~~i~~l~~h~---------------~~V~sl~~spdg~~Lasgs-dd-~I~IwDl~t~~~i~~l~~~ 714 (784)
++.|+.||.... +..+.++. .....++++++|+++++-. .+ .|++||+.++.. .++.++
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEEC
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCC
Confidence 788999997644 33333332 3478999999999777765 55 999999887764 334332
Q ss_pred ---------------CCceEEEEEecCCCEEEEEECCCeEEEEEC
Q 047260 715 ---------------GNQFHSCVFHPSYSTLLVVGGISSLELWNM 744 (784)
Q Consensus 715 ---------------~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl 744 (784)
-.....+++++++..+++-..++.|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 135788999999766666666678888765
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.41 E-value=6.6e-10 Score=116.14 Aligned_cols=232 Identities=8% Similarity=-0.028 Sum_probs=166.4
Q ss_pred CCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe
Q 047260 547 DHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL 626 (784)
Q Consensus 547 ~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~ 626 (784)
.....+.+|++.++++++++...++.|.+||.. ++............+.++++.+++. ++++...++.|..||.. .+
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SC
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEecCCCeEEEECCC-CC
Confidence 345678999999999988877778999999988 4433222333446789999998876 66666667899999988 44
Q ss_pred eEE-ee---cCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEE-EEeCCCCCEEEEEEcCCCCEEEEEeC-CeEEEE
Q 047260 627 CTH-IT---KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTH-SLQGHAELVNYICWDTNGDYLASVSQ-NLVKVW 700 (784)
Q Consensus 627 ~~~-~~---~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~-~l~~h~~~V~sl~~spdg~~Lasgsd-d~I~Iw 700 (784)
... .. ...+..+++.+++..+++...++.|..||.. ++... .+......+.+++++++|+++++... +.|.+|
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 332 22 2457888999988766665557899999988 55442 23334567899999999997766654 489999
Q ss_pred eCCCCceEEE-eccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEe--cccCCceEEEEEeCCCCEEEEEECC
Q 047260 701 SMASGECIQE-LSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTI--AAHENIISALAQSPVTGMVASASHD 777 (784)
Q Consensus 701 Dl~t~~~i~~-l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~D 777 (784)
|. +++.... +......+..+++.+++..+++....+.|.+||. ++..... ..+...+.+++++++++++++...+
T Consensus 173 ~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 173 TN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 98 5554432 2234456889999999876555555678999998 4544432 3445678999999999877766567
Q ss_pred CcEEEeC
Q 047260 778 SSVKLWK 784 (784)
Q Consensus 778 G~V~IWd 784 (784)
+.|.+||
T Consensus 251 ~~i~~~~ 257 (300)
T 2qc5_A 251 NQIGRIT 257 (300)
T ss_dssp TEEEEEC
T ss_pred CeEEEEC
Confidence 8888775
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.40 E-value=3.6e-10 Score=119.85 Aligned_cols=226 Identities=15% Similarity=0.123 Sum_probs=158.1
Q ss_pred cCCCceEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc
Q 047260 505 SRNSKVTCCHFSSDG-KLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF 583 (784)
Q Consensus 505 ~H~~~V~~l~fspdg-~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~ 583 (784)
.+..-..+..|++++ .++++...++.|..||..+++.. .+ .....+.+++++++++++++ . +..|.+||.++++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcE
Confidence 344556788999954 46666667899999999877653 23 34578999999999995554 4 56899999987652
Q ss_pred eeeeccC----CCCCeEEEEEcCCCCcEEEEE-eC----------CCeEEEEeCCCCe-eEEeecCCeeEEEEecCCCEE
Q 047260 584 CSQAYTG----HSSPIMSLDFHPKKTDLFCFC-DN----------DNEIQYWSINPFL-CTHITKGGTAQVRFQPRIGQL 647 (784)
Q Consensus 584 ~~~~~~~----h~~~V~sl~~sp~~~~ll~sg-s~----------dg~I~iwDl~~~~-~~~~~~~~v~~v~fsp~~~~L 647 (784)
. ..... ....+..++++|++. ++++. .. .+.|+.++..... .+.........++|+|+++.+
T Consensus 86 ~-~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 86 V-VLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp E-EEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEE
T ss_pred E-EEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEE
Confidence 2 11111 123578899999988 44443 21 2345555543211 112222456789999999988
Q ss_pred EEEEC-CCcEEEEEC--CCCeE-----EEEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEeccCCCce
Q 047260 648 LAAAS-DKVVSIFDI--ETDRQ-----THSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSSNGNQF 718 (784)
Q Consensus 648 l~~s~-Dg~I~IwDl--~t~~~-----i~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~~~I 718 (784)
+++.. ++.|.+||+ .++.. ...+..+......++++++|++.++...+ .|.+||..+++.+..+..+...+
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~ 243 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT 243 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc
Confidence 77665 789999997 45532 22223344577899999999988877655 89999999999999998887889
Q ss_pred EEEEEe-cCCCEEEEEECC
Q 047260 719 HSCVFH-PSYSTLLVVGGI 736 (784)
Q Consensus 719 ~sl~fs-pdg~~L~s~s~d 736 (784)
++|+|. |+++.|++++..
T Consensus 244 t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 244 TSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEEESGGGCEEEEEEBC
T ss_pred eEEEEeCCCCCEEEEEcCC
Confidence 999998 888887777653
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=8.4e-12 Score=135.56 Aligned_cols=256 Identities=11% Similarity=0.005 Sum_probs=170.1
Q ss_pred CceEEEEEcCCCCEEEEEe--CCCeEEEEECCCCceee------ecCCCCCCeEEEEEccCCCEEEEEeC-----CCeEE
Q 047260 508 SKVTCCHFSSDGKLLASSG--HDRKVVLWNMDTLQTES------TPEDHKSVVTDVRFRPNSSQLATASV-----DKSVR 574 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs--~Dg~I~IWd~~t~~~~~------~l~~h~~~It~i~fspdg~~Latgs~-----Dg~I~ 574 (784)
..+..++++++|+++++.. .++.++||.+.+++... ....|-..+..|+|+++++++++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 6799999999999888864 23435555554554331 11235578999999999876665433 57899
Q ss_pred EEcCCCCcceeeecc------CCCCCeEEEEEcCCCCcEEEEEe---CCCeEEEEeCCCCeeEEeecCC--ee--EEEEe
Q 047260 575 LWDAANPNFCSQAYT------GHSSPIMSLDFHPKKTDLFCFCD---NDNEIQYWSINPFLCTHITKGG--TA--QVRFQ 641 (784)
Q Consensus 575 IWdl~~~~~~~~~~~------~h~~~V~sl~~sp~~~~ll~sgs---~dg~I~iwDl~~~~~~~~~~~~--v~--~v~fs 641 (784)
+||+.+++. ...+. .+...+..+++++++..++++.. .++.|.+||+.+.+.......+ .. ...+.
T Consensus 97 ~~d~~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 97 AWDTLNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEETTTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEECCCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 999987763 22222 12345689999987666767665 6889999999887766655331 10 13445
Q ss_pred cCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC--eEEEEeCC---CCc--------eE
Q 047260 642 PRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN--LVKVWSMA---SGE--------CI 708 (784)
Q Consensus 642 p~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd--~I~IwDl~---t~~--------~i 708 (784)
+++..+.+...++.+..|. ..+..|+|+|+|+.|+.+... .|..++.. .+. .+
T Consensus 176 ~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKI 241 (343)
T ss_dssp ETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTC
T ss_pred ECCEEEEeccCCCceecee--------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcce
Confidence 5665666666677665543 246789999999988877643 55555532 111 01
Q ss_pred EEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEecc--cCCceEEEEEeCCCCEEEEEECCCc
Q 047260 709 QELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAA--HENIISALAQSPVTGMVASASHDSS 779 (784)
Q Consensus 709 ~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~--h~~~V~slafspdg~~LaSgs~DG~ 779 (784)
..+ ++......+++++++..+++...++.|.+||..+++...+.. +...+.+++|.+++.++++.+..+.
T Consensus 242 ~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 242 ERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp EEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGG
T ss_pred Eec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccc
Confidence 111 223355678999999888887788899999995565443332 2456899999999988888765443
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.38 E-value=4.1e-11 Score=142.80 Aligned_cols=242 Identities=12% Similarity=0.064 Sum_probs=166.2
Q ss_pred cCCCceEEEEEcCCCCEEEEEe-----CCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCe-------
Q 047260 505 SRNSKVTCCHFSSDGKLLASSG-----HDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKS------- 572 (784)
Q Consensus 505 ~H~~~V~~l~fspdg~~Lasgs-----~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~------- 572 (784)
+|...|..++|||||++||.+. ....|+|||+.+++.+... .+......++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 3566788999999999988543 2357999999998865431 111113578999 9999999988743
Q ss_pred ------EEEEcCCCCcc---eeeeccC-CCCCeEEEEEcCCCCcEEEEEeCC---CeEEEEeCCCC--ee--EEeecCCe
Q 047260 573 ------VRLWDAANPNF---CSQAYTG-HSSPIMSLDFHPKKTDLFCFCDND---NEIQYWSINPF--LC--THITKGGT 635 (784)
Q Consensus 573 ------I~IWdl~~~~~---~~~~~~~-h~~~V~sl~~sp~~~~ll~sgs~d---g~I~iwDl~~~--~~--~~~~~~~v 635 (784)
|++|++.++.. ++..... |...+..+.|+|++..++++...+ ..|+++|+.+. .. +.......
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 99999987652 2222223 445678899999999887776543 58999998754 22 22222333
Q ss_pred eEEEEecCCCEEEEEEC----CCcEEEEECCCCeE--EEEEeCCCCCEEEEEEcCCCCEEEEEe--CC--eEEEEeCCCC
Q 047260 636 AQVRFQPRIGQLLAAAS----DKVVSIFDIETDRQ--THSLQGHAELVNYICWDTNGDYLASVS--QN--LVKVWSMASG 705 (784)
Q Consensus 636 ~~v~fsp~~~~Ll~~s~----Dg~I~IwDl~t~~~--i~~l~~h~~~V~sl~~spdg~~Lasgs--dd--~I~IwDl~t~ 705 (784)
... ++++++.|+..+. .+.|.++|+.++.. ...+..|...+. .|++++++|+... ++ .|++||+..+
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 333 6777787776665 26799999987654 345555666554 8889898877665 33 7999998854
Q ss_pred ceEEEecc-CCCceEEEEEecCCCEEEEEECC----CeEEEEECCCCceEEe
Q 047260 706 ECIQELSS-NGNQFHSCVFHPSYSTLLVVGGI----SSLELWNMAENKSMTI 752 (784)
Q Consensus 706 ~~i~~l~~-~~~~I~sl~fspdg~~L~s~s~d----g~I~Iwdl~~~~~~~~ 752 (784)
....+.. ....+..+.+++++..|+....+ +.|+.||+.+++...+
T Consensus 361 -~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l 411 (693)
T 3iuj_A 361 -RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLY 411 (693)
T ss_dssp -EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEE
T ss_pred -eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEE
Confidence 4445543 33556777788888877766554 7899999988765433
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=1e-11 Score=136.81 Aligned_cols=172 Identities=11% Similarity=0.116 Sum_probs=138.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----------eeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 509 KVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ-----------TESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~-----------~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
.++.+++++...+|++|+.++ ++||++++.. ..... .+.. |+.|+| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 589999999999999999885 6669876433 11222 3566 999999 89999998 889999999
Q ss_pred CCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEECCCcEE
Q 047260 578 AANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAASDKVVS 657 (784)
Q Consensus 578 l~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~ 657 (784)
+.+.. .......|...+.++.+.+.. ++++..||.|.+||+....... +...+++++|+|+| ++++..||.|+
T Consensus 113 v~sl~-~~~~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 113 LEELS-EFRTVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSSTT-CEEEEEECSSCEEEEEECSSE---EEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred chhhh-ccCccceeecceeeEEecCCC---EEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 98765 334455677788888877542 7778899999999999766554 56789999999998 78899999999
Q ss_pred EEECCCCeE--EEEE------e---CCCCCEEEEEEcCCCCEEEEEe
Q 047260 658 IFDIETDRQ--THSL------Q---GHAELVNYICWDTNGDYLASVS 693 (784)
Q Consensus 658 IwDl~t~~~--i~~l------~---~h~~~V~sl~~spdg~~Lasgs 693 (784)
+|+...... ...+ . +|...|.+|+|.+++.++++-.
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 999988775 5566 2 3778999999999999998754
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.37 E-value=2.1e-10 Score=127.99 Aligned_cols=228 Identities=13% Similarity=0.084 Sum_probs=159.0
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCC--eEEEEeCCCCee
Q 047260 550 SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDN--EIQYWSINPFLC 627 (784)
Q Consensus 550 ~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg--~I~iwDl~~~~~ 627 (784)
.....|+|+++++++++...++.|++||..++. +....... .... ++|++++..+++ ++.++ .|.+|+......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~-~~~~~~~~-~~~~-ia~~~~g~~l~~-~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK-VTTVHPGF-KGGK-PAVTKDKQRVYS-IGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE-EEEEEETC-CBCB-CEECTTSSEEEE-EBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE-EEEeeccC-CCCc-eeEecCCCcEEE-EecCCCceEEEEEcCCCce
Confidence 467899999999877777778999999998755 33333332 2333 999999885554 44443 899998875433
Q ss_pred EEee-------cCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE----EeCCCCCE--EEEEEcCCCCEEEEEe-
Q 047260 628 THIT-------KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS----LQGHAELV--NYICWDTNGDYLASVS- 693 (784)
Q Consensus 628 ~~~~-------~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~----l~~h~~~V--~sl~~spdg~~Lasgs- 693 (784)
.... ......++++|+++.|+++..++.|+.||..++..... ..++...- ..++|+|++..|+.+.
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 2222 24567899999777788877788999999987754332 22222222 3899999644444444
Q ss_pred C-CeEEEEeCCCCceEEEeccCC---------------CceEEEEEecCCCEEEEEE-CCCeEEEEECCCCceEEeccc-
Q 047260 694 Q-NLVKVWSMASGECIQELSSNG---------------NQFHSCVFHPSYSTLLVVG-GISSLELWNMAENKSMTIAAH- 755 (784)
Q Consensus 694 d-d~I~IwDl~t~~~i~~l~~~~---------------~~I~sl~fspdg~~L~s~s-~dg~I~Iwdl~~~~~~~~~~h- 755 (784)
. +.|+.|+.... +..+.++. .....+++++++.++++-. .++.|+.|++.++....+.++
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~ 364 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQV 364 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCC
Confidence 3 39999997644 33333321 3478999999999666655 678999999888877666555
Q ss_pred --------------CCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 756 --------------ENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 756 --------------~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
-.....|++++++.++++-..+++|+.+
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 2468999999998777777778888765
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.36 E-value=7.6e-10 Score=117.33 Aligned_cols=224 Identities=7% Similarity=0.057 Sum_probs=152.3
Q ss_pred CCCCCCeEEEEEccC-CCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC
Q 047260 546 EDHKSVVTDVRFRPN-SSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP 624 (784)
Q Consensus 546 ~~h~~~It~i~fspd-g~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~ 624 (784)
..+..-..+..|+++ +.++++...++.|..||..++... .+ .....+.++++++++. ++++ . +..|.+||.++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~-~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ--RV-TMDAPVSSVALRQSGG-YVAT-I-GTKFCALNWKE 82 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE--EE-ECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETTT
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE--EE-eCCCceEEEEECCCCC-EEEE-E-CCeEEEEECCC
Confidence 344455678999995 455666667899999999876532 22 2356799999999998 4444 3 67899999987
Q ss_pred CeeEEeec-------CCeeEEEEecCCCEEEEEECC---------CcEEEEECCC-CeEEEEEeCCCCCEEEEEEcCCCC
Q 047260 625 FLCTHITK-------GGTAQVRFQPRIGQLLAAASD---------KVVSIFDIET-DRQTHSLQGHAELVNYICWDTNGD 687 (784)
Q Consensus 625 ~~~~~~~~-------~~v~~v~fsp~~~~Ll~~s~D---------g~I~IwDl~t-~~~i~~l~~h~~~V~sl~~spdg~ 687 (784)
.+...... ..+..++++|+++.+++...+ ....||.+.. ++... +..+....+.++|+|+++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSC
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCC
Confidence 65543322 235778999998855544321 2234444432 33322 333445568899999999
Q ss_pred EEEEEe--CCeEEEEeC--CCCce-----EEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccCC
Q 047260 688 YLASVS--QNLVKVWSM--ASGEC-----IQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHEN 757 (784)
Q Consensus 688 ~Lasgs--dd~I~IwDl--~t~~~-----i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~ 757 (784)
.|+.+. .+.|.+||+ .++.. +..+.........++++++|.+.++....+.|.+||..+++.+ .+..+..
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~ 241 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD 241 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC
Confidence 776655 348999987 45543 2233333456789999999987777777789999999988776 4555667
Q ss_pred ceEEEEEe-CCCCEEEEEEC
Q 047260 758 IISALAQS-PVTGMVASASH 776 (784)
Q Consensus 758 ~V~slafs-pdg~~LaSgs~ 776 (784)
.+++++|. |+++.|+.++.
T Consensus 242 ~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BEEEEEEESGGGCEEEEEEB
T ss_pred CceEEEEeCCCCCEEEEEcC
Confidence 89999998 88876655543
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.36 E-value=8.5e-11 Score=131.23 Aligned_cols=246 Identities=13% Similarity=0.137 Sum_probs=173.9
Q ss_pred EEeEeecCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCceeeecCCC-------CCCeEEEEEccCC
Q 047260 499 EVGCIRSRNSKVTCCHFSSDGKLLASSG----------HDRKVVLWNMDTLQTESTPEDH-------KSVVTDVRFRPNS 561 (784)
Q Consensus 499 ~i~~l~~H~~~V~~l~fspdg~~Lasgs----------~Dg~I~IWd~~t~~~~~~l~~h-------~~~It~i~fspdg 561 (784)
.+..+..-..+ .++++|||++|+++. .++.|.++|..+++.+..+.-. ......+.|+||+
T Consensus 111 vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDG 188 (426)
T 3c75_H 111 ILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDN 188 (426)
T ss_dssp EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTS
T ss_pred EEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCC
Confidence 34444433444 799999999888776 3678999999999988876421 2345678999999
Q ss_pred CEEEEEeC--CCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe----ec---
Q 047260 562 SQLATASV--DKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI----TK--- 632 (784)
Q Consensus 562 ~~Latgs~--Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~----~~--- 632 (784)
++|+++.. ++.|.+.|+.+.+. ...+.-. . +....|++...+++.+.||.+.+.++...+.... +.
T Consensus 189 k~lyV~n~~~~~~VsVID~~t~kv-v~~I~v~-g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~ 263 (426)
T 3c75_H 189 KNLLFYQFSPAPAVGVVDLEGKTF-DRMLDVP-D---CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTED 263 (426)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEE-EEEEECC-S---EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTT
T ss_pred CEEEEEecCCCCeEEEEECCCCeE-EEEEEcC-C---ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCC
Confidence 99999875 57899999998774 3333321 1 1344566656777777888888888855444321 11
Q ss_pred CC-eeEEEEecCCCEEEEEECCCcEEEEECCCCeEE--EEEeC----------CCCCEEEEEEcCCCCEEEEEe------
Q 047260 633 GG-TAQVRFQPRIGQLLAAASDKVVSIFDIETDRQT--HSLQG----------HAELVNYICWDTNGDYLASVS------ 693 (784)
Q Consensus 633 ~~-v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i--~~l~~----------h~~~V~sl~~spdg~~Lasgs------ 693 (784)
.+ ...+.|.+++..++.....+.|.+.|+...... ..+.. .......+++++++..+++..
T Consensus 264 ~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g 343 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW 343 (426)
T ss_dssp SCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT
T ss_pred CceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccc
Confidence 11 123467889998888888899999999765422 11110 001112368999988776653
Q ss_pred -----CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCC-EEEEEE-CCCeEEEEECCCCceEEe
Q 047260 694 -----QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYS-TLLVVG-GISSLELWNMAENKSMTI 752 (784)
Q Consensus 694 -----dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~-~L~s~s-~dg~I~Iwdl~~~~~~~~ 752 (784)
.+.|.++|+.+.+.+.++... .....+.|+|+++ +++++. .++.|.++|+.+++.+..
T Consensus 344 thk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 344 KHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred cccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 237999999999999998654 3578999999999 888888 489999999999998743
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=1.3e-09 Score=117.39 Aligned_cols=219 Identities=15% Similarity=0.051 Sum_probs=152.9
Q ss_pred eEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeec
Q 047260 510 VTCCHFSSDGK-LLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAY 588 (784)
Q Consensus 510 V~~l~fspdg~-~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~ 588 (784)
..+.+|+|++. ++++...++.|.+||..+++... + .....|.+++|+++++++++. .+ .|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-H-ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-E-ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-E-ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 56788999754 56666678899999998775432 2 235679999999999877654 44 59999988766321111
Q ss_pred c--C-CCCCeEEEEEcCCCCcEEEEEeC------CCeEEEEeCCCCeeEEee--cCCeeEEEEecCCCEEEEEEC-CCcE
Q 047260 589 T--G-HSSPIMSLDFHPKKTDLFCFCDN------DNEIQYWSINPFLCTHIT--KGGTAQVRFQPRIGQLLAAAS-DKVV 656 (784)
Q Consensus 589 ~--~-h~~~V~sl~~sp~~~~ll~sgs~------dg~I~iwDl~~~~~~~~~--~~~v~~v~fsp~~~~Ll~~s~-Dg~I 656 (784)
. . ....+.+++++|++. ++++... .+.|..++ ..+..... ......++|+|+++.++++.. ++.|
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred CCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 1 1 123588999999987 4444332 25666666 34333222 245678999999998877665 6899
Q ss_pred EEEECC--CC-e-----EEEEEeCCCCCEEEEEEcCCCCEEEEEeC-CeEEEEeCCCCceEEEeccCCCceEEEEEe-cC
Q 047260 657 SIFDIE--TD-R-----QTHSLQGHAELVNYICWDTNGDYLASVSQ-NLVKVWSMASGECIQELSSNGNQFHSCVFH-PS 726 (784)
Q Consensus 657 ~IwDl~--t~-~-----~i~~l~~h~~~V~sl~~spdg~~Lasgsd-d~I~IwDl~t~~~i~~l~~~~~~I~sl~fs-pd 726 (784)
.+||+. ++ . .+..+.........++++++|.++++... +.|.+||. +++.+..+..+...+.+++|. ++
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence 999986 55 2 22233334456788999999998777654 58999998 677778887777789999998 88
Q ss_pred CCEEEEEECC
Q 047260 727 YSTLLVVGGI 736 (784)
Q Consensus 727 g~~L~s~s~d 736 (784)
+..|++++..
T Consensus 283 ~~~L~vt~~~ 292 (326)
T 2ghs_A 283 ASRLLVTSAR 292 (326)
T ss_dssp SCEEEEEEBC
T ss_pred CCEEEEEecC
Confidence 8877766654
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=6.7e-10 Score=118.14 Aligned_cols=235 Identities=13% Similarity=0.138 Sum_probs=161.3
Q ss_pred eEeecCCCceEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCC
Q 047260 501 GCIRSRNSKVTCCHFSSDGK-LLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAA 579 (784)
Q Consensus 501 ~~l~~H~~~V~~l~fspdg~-~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~ 579 (784)
..+..+........|+++|+ +++++..++.|..|+.. ++ ...+..+...+..++++++|+++++...++.|.+|+.+
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 34445566688899999998 56677778999999984 44 34455566789999999999976666566889999986
Q ss_pred CCcceeee--ccC-CCCCeEEEEEcCCCCcEEEE----EeC-------------CCeEEEEeCCCCeeEEe-ecCCeeEE
Q 047260 580 NPNFCSQA--YTG-HSSPIMSLDFHPKKTDLFCF----CDN-------------DNEIQYWSINPFLCTHI-TKGGTAQV 638 (784)
Q Consensus 580 ~~~~~~~~--~~~-h~~~V~sl~~sp~~~~ll~s----gs~-------------dg~I~iwDl~~~~~~~~-~~~~v~~v 638 (784)
+...... ..+ ....+.++++.+++. ++++ +.. .+.|+.||..+.+.... .......+
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl 193 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGL 193 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcce
Confidence 4421111 111 123467899999987 5554 221 25688888754433222 23455779
Q ss_pred EEecCCCEEEEEECC------CcEEEEECCCCeE--EEEE-eCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEE
Q 047260 639 RFQPRIGQLLAAASD------KVVSIFDIETDRQ--THSL-QGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQ 709 (784)
Q Consensus 639 ~fsp~~~~Ll~~s~D------g~I~IwDl~t~~~--i~~l-~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~ 709 (784)
+|+|+++.|+++... +.|.+||+..+.. ...+ .........++++++|++.++. .+.|.+||. +++.+.
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~-~g~~~~ 271 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTGVCVFDS-DGQLLG 271 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSEEEEECT-TSCEEE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCcEEEECC-CCCEEE
Confidence 999999988888775 7899999876541 1112 1123345678999999965554 557999998 577777
Q ss_pred EeccCCCceEEEEEecCCCEEEEEECCCeEEEEE
Q 047260 710 ELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWN 743 (784)
Q Consensus 710 ~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwd 743 (784)
.+..+. .+.+++|.++++.|++++.++ |..++
T Consensus 272 ~~~~~~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 272 HIPTPG-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EEECSS-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EEECCC-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 776655 588999999999898888764 44333
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.29 E-value=3.2e-09 Score=114.32 Aligned_cols=216 Identities=11% Similarity=0.064 Sum_probs=146.8
Q ss_pred CeEEEEEccCC-CEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE
Q 047260 551 VVTDVRFRPNS-SQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTH 629 (784)
Q Consensus 551 ~It~i~fspdg-~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~ 629 (784)
...++.|+|++ .++++...++.|.+||..++... .+. ....+.++.|.+++. +++++ +..|.+||..+.+...
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~~-~~~~v~~i~~~~dg~-l~v~~--~~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT--VHA-LPFMGSALAKISDSK-QLIAS--DDGLFLRDTATGVLTL 123 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE--EEE-CSSCEEEEEEEETTE-EEEEE--TTEEEEEETTTCCEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEE-CCCcceEEEEeCCCe-EEEEE--CCCEEEEECCCCcEEE
Confidence 35678999974 45566667889999999876522 222 346799999999986 44433 3459999988766543
Q ss_pred eec-------CCeeEEEEecCCCEEEEEEC------CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe--C
Q 047260 630 ITK-------GGTAQVRFQPRIGQLLAAAS------DKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS--Q 694 (784)
Q Consensus 630 ~~~-------~~v~~v~fsp~~~~Ll~~s~------Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs--d 694 (784)
... ..+..++++|+++.+++... .+.|..+| +++... +..+......++|+|+++.|+.+. +
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 322 23678899999886554432 24566666 454433 322334578899999999776665 3
Q ss_pred CeEEEEeCC--CC-c-----eEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccCCceEEEEEe
Q 047260 695 NLVKVWSMA--SG-E-----CIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHENIISALAQS 765 (784)
Q Consensus 695 d~I~IwDl~--t~-~-----~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~~V~slafs 765 (784)
+.|.+||+. ++ . .+..+......+..+++.+++.++++...++.|.+||.. ++.+ .+..+...+++++|+
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEECSCSBEEEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCEEEEEECCCCCcEEEEEe
Confidence 489999986 55 3 223333334557889999999877766677899999984 4444 555566679999998
Q ss_pred -CCCCEEEEEEC
Q 047260 766 -PVTGMVASASH 776 (784)
Q Consensus 766 -pdg~~LaSgs~ 776 (784)
++++.|++++.
T Consensus 280 g~d~~~L~vt~~ 291 (326)
T 2ghs_A 280 GPDASRLLVTSA 291 (326)
T ss_dssp STTSCEEEEEEB
T ss_pred cCCCCEEEEEec
Confidence 88876655543
No 219
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.28 E-value=2.5e-09 Score=116.88 Aligned_cols=253 Identities=11% Similarity=0.040 Sum_probs=164.5
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCe--
Q 047260 518 DGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPI-- 595 (784)
Q Consensus 518 dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V-- 595 (784)
++..|++++.++.|..+|..+++.+................ +..+++++.++.|..+|..+++..-. +.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~-~~~~~~~~~~ 178 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWT-VNLDMPSLSL 178 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEE-EECCC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEE-EeCCCCceee
Confidence 35577888899999999999999887765443222222222 45788888999999999998774332 22111110
Q ss_pred ---EEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCee-------E---EEEe--cCCCEEEEEECCCcEEEEE
Q 047260 596 ---MSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTA-------Q---VRFQ--PRIGQLLAAASDKVVSIFD 660 (784)
Q Consensus 596 ---~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~-------~---v~fs--p~~~~Ll~~s~Dg~I~IwD 660 (784)
...... + . .++.+..++.|..+|..+++.+........ . +... ..++.+++++.++.|..+|
T Consensus 179 ~~~~~~~~~-~-~-~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 179 RGESAPTTA-F-G-AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALD 255 (376)
T ss_dssp CCCCCCEEE-T-T-EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEE
T ss_pred cCCCCcEEE-C-C-EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEE
Confidence 112222 2 2 566677899999999988877655442110 0 0011 1357788888899999999
Q ss_pred CCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCceEEEeccC-CCceEEEEEecCCCEEEEEECCCe
Q 047260 661 IETDRQTHSLQGHAELVNYICWDTNGDYLASVS-QNLVKVWSMASGECIQELSSN-GNQFHSCVFHPSYSTLLVVGGISS 738 (784)
Q Consensus 661 l~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~~i~~l~~~-~~~I~sl~fspdg~~L~s~s~dg~ 738 (784)
.++++.+..... .....+... +..|+.++ ++.|..+|..+++.+...... ...+....+. +..|++++.+|.
T Consensus 256 ~~tG~~~w~~~~--~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~ 329 (376)
T 3q7m_A 256 LRSGQIMWKREL--GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGY 329 (376)
T ss_dssp TTTCCEEEEECC--CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSE
T ss_pred CCCCcEEeeccC--CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCe
Confidence 999988876642 334444443 44555555 559999999999988777622 2223333333 457999999999
Q ss_pred EEEEECCCCceEE-ecccCCceE-EEEEeCCCCEEEEEECCCcEEEeC
Q 047260 739 LELWNMAENKSMT-IAAHENIIS-ALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 739 I~Iwdl~~~~~~~-~~~h~~~V~-slafspdg~~LaSgs~DG~V~IWd 784 (784)
|+++|..+++.+. .......+. ..... +..|+.++.||.|..||
T Consensus 330 l~~~d~~tG~~~~~~~~~~~~~~~~~~~~--~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 330 LHWINVEDGRFVAQQKVDSSGFQTEPVAA--DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEETTTCCEEEEEECCTTCBCSCCEEE--TTEEEEEBTTSCEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCcceeCCEEE--CCEEEEEeCCCEEEEEe
Confidence 9999999998873 322223332 22222 56788899999999885
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.27 E-value=5.7e-11 Score=130.39 Aligned_cols=253 Identities=11% Similarity=0.067 Sum_probs=173.6
Q ss_pred eEEeEeecCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCceeeecCCC-------CCCeEEEEEccC
Q 047260 498 CEVGCIRSRNSKVTCCHFSSDGKLLASSG----------HDRKVVLWNMDTLQTESTPEDH-------KSVVTDVRFRPN 560 (784)
Q Consensus 498 ~~i~~l~~H~~~V~~l~fspdg~~Lasgs----------~Dg~I~IWd~~t~~~~~~l~~h-------~~~It~i~fspd 560 (784)
+.+.++..-..+ .+.|+||+++|+++. .++.|.+||+.+++.+.++..+ ......+.|+||
T Consensus 57 ~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpD 134 (368)
T 1mda_H 57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134 (368)
T ss_dssp EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT
T ss_pred eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCC
Confidence 344555544455 799999999988886 3688999999999999988543 124568999999
Q ss_pred CCEEEEEeC--CCeEEE--EcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-----CeeEEe-
Q 047260 561 SSQLATASV--DKSVRL--WDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP-----FLCTHI- 630 (784)
Q Consensus 561 g~~Latgs~--Dg~I~I--Wdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~-----~~~~~~- 630 (784)
|++|+++.. +..|.+ +|+.+ ...+.- .+ |+.+.|++...+++.+.|+.+.+.|+.+ .+....
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~~t----v~~i~v-~~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~ 206 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGASD----DQLTKS-AS---CFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQC 206 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTTEE----EEEEEC-SS---CCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCS
T ss_pred CCEEEEEccCCCCeEEEEEEchhh----ceEEEC-CC---ceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEe
Confidence 999999875 467888 99876 122211 11 1224566666777777888888888876 332211
Q ss_pred ---e---cCCeeEEEEecCCCEEEEEECCCcEEEEECCCC--eEEEEEeCC----------CCCEEEEEEcCCCCEEEEE
Q 047260 631 ---T---KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETD--RQTHSLQGH----------AELVNYICWDTNGDYLASV 692 (784)
Q Consensus 631 ---~---~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~--~~i~~l~~h----------~~~V~sl~~spdg~~Lasg 692 (784)
+ ..+. . .++++.++..+. +.|.+.|+... +.+..+... ......++++|+++.++++
T Consensus 207 t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~ 281 (368)
T 1mda_H 207 TGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp CTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred eeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEE
Confidence 1 1222 3 677777777777 99999999754 233322211 0111226899999887764
Q ss_pred e--C--------CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCE-EEEEE-CCCeEEEEECCCCceEEecccCCceE
Q 047260 693 S--Q--------NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYST-LLVVG-GISSLELWNMAENKSMTIAAHENIIS 760 (784)
Q Consensus 693 s--d--------d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~-L~s~s-~dg~I~Iwdl~~~~~~~~~~h~~~V~ 760 (784)
. . +.+.++|+.+.+.+.++.... ....++|+|++++ +++.. .++.|.++|+.+++.+....-.....
T Consensus 282 ~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~ 360 (368)
T 1mda_H 282 TVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPE 360 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCC
T ss_pred eccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCC
Confidence 2 2 366799999999998886543 5789999999985 45555 48999999999999885554444556
Q ss_pred EEEEeC
Q 047260 761 ALAQSP 766 (784)
Q Consensus 761 slafsp 766 (784)
.+++.+
T Consensus 361 ~i~~~~ 366 (368)
T 1mda_H 361 SLSVQN 366 (368)
T ss_dssp EEECCC
T ss_pred EEEeec
Confidence 666554
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.26 E-value=1.1e-09 Score=116.35 Aligned_cols=230 Identities=7% Similarity=-0.016 Sum_probs=155.5
Q ss_pred eecCCCCCCeEEEEEccCCC-EEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEe
Q 047260 543 STPEDHKSVVTDVRFRPNSS-QLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWS 621 (784)
Q Consensus 543 ~~l~~h~~~It~i~fspdg~-~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwD 621 (784)
..+...........|+++++ ++++...++.|..|+.. +. ...+..+...+..+++++++. ++++...++.|.+|+
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~--~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT--VDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSD 113 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC--EEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEEC
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC--EEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEEC
Confidence 33444556678899999998 56666778999999984 33 233444567789999999987 665555568899999
Q ss_pred CCCCeeEEee---c----CCeeEEEEecCCCEEEE----EEC-------------CCcEEEEECCCCeEEEEEeCCCCCE
Q 047260 622 INPFLCTHIT---K----GGTAQVRFQPRIGQLLA----AAS-------------DKVVSIFDIETDRQTHSLQGHAELV 677 (784)
Q Consensus 622 l~~~~~~~~~---~----~~v~~v~fsp~~~~Ll~----~s~-------------Dg~I~IwDl~t~~~i~~l~~h~~~V 677 (784)
.+ +...... . ..+..+++.+++..+++ +.. .+.|..||..+++..... .....
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p 190 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHP 190 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCC
Confidence 86 3332221 1 23567999999887665 221 256888887666544333 34466
Q ss_pred EEEEEcCCCCEEEEEeC-------CeEEEEeCCCCce--EEEe-ccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCC
Q 047260 678 NYICWDTNGDYLASVSQ-------NLVKVWSMASGEC--IQEL-SSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAEN 747 (784)
Q Consensus 678 ~sl~~spdg~~Lasgsd-------d~I~IwDl~t~~~--i~~l-~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~ 747 (784)
..++|+|+++.|+++.. +.|.+||+..+.. ...+ .........++++++|+ |++++.+ .|.+|+....
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~~g~ 268 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDSDGQ 268 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECTTSC
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECCCCC
Confidence 88999999997766653 4899999876541 1111 11233456789999998 5555544 5999998544
Q ss_pred ceEEecccCCceEEEEEeCCCCEEEEEECCCcEEE
Q 047260 748 KSMTIAAHENIISALAQSPVTGMVASASHDSSVKL 782 (784)
Q Consensus 748 ~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~I 782 (784)
....+..+. .+.+++|+++++.|+.++.++..++
T Consensus 269 ~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 269 LLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 333444343 5899999999998888888765554
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.25 E-value=5.1e-10 Score=119.21 Aligned_cols=256 Identities=11% Similarity=-0.010 Sum_probs=169.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeec
Q 047260 509 KVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAY 588 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~ 588 (784)
.+.++.+.+++. |.+++.+ |..||. +++.+..+......+....+. +..|+.++.++.|..+|.. ++ .....
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~-~~~~~ 132 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GT-EKWRF 132 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SC-EEEEE
T ss_pred cccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CC-EEEEE
Confidence 456777777775 4444444 888886 566655554433333334443 5568888889999999988 55 33333
Q ss_pred cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCe
Q 047260 589 TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDR 665 (784)
Q Consensus 589 ~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~ 665 (784)
..+...+.++...+++. +..++.++.|..+|.. ++...... ..+.++.+.+++. +++++ +.|..|| .+++
T Consensus 133 ~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~ 205 (330)
T 3hxj_A 133 KTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS--DKVYAIN-PDGT 205 (330)
T ss_dssp ECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES--SSEEEEC-TTSC
T ss_pred cCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe--CEEEEEC-CCCc
Confidence 33444566667766665 4557778999999998 55543332 3445566666655 55555 8899999 7777
Q ss_pred EEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECC
Q 047260 666 QTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMA 745 (784)
Q Consensus 666 ~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~ 745 (784)
.+..+......+.++..+++|.++++..++.|..+| .+++.+..+......+..+.+.+++ .|++++.+|.|..+|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~- 282 (330)
T 3hxj_A 206 EKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP- 282 (330)
T ss_dssp EEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-
T ss_pred EEEEEccCCcceeceEECCCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-
Confidence 777776666678888999988877766667888887 4666666666554444556665555 5888888889999996
Q ss_pred CCceE-EecccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 746 ENKSM-TIAAHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 746 ~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
+++.. ........+.++...+++. |..++.+|.+++.
T Consensus 283 ~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 283 DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEE
T ss_pred CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEE
Confidence 55544 4434455677787777775 4558889988764
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.21 E-value=1.8e-13 Score=150.68 Aligned_cols=223 Identities=10% Similarity=0.004 Sum_probs=122.3
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCC-CeE
Q 047260 518 DGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSS-PIM 596 (784)
Q Consensus 518 dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~-~V~ 596 (784)
++..|++++.||.|+.||..+++.+..+.. +.+.+..+..++..+++++.|+.|+.||.++++.. ..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~-w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL-TKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCS-EECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCcee-eeeeccCccccc
Confidence 577899999999999999999999988865 55666666667878888889999999999887632 22221110 010
Q ss_pred -EEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCC
Q 047260 597 -SLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAE 675 (784)
Q Consensus 597 -sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~ 675 (784)
+..+. .+. .+++++.++.|+.||.++++.+..+.... ...++|+++.+++++.|+.|+.||.++++.+..+..+.
T Consensus 85 ~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 85 ASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAF-ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp TCSCC-------CCCCEEEEEEEEECCC-----------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred cCceEe-cCC-EEEEEeCCCEEEEEECCCCcEEEEecCCC-cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 00111 222 56667779999999999888776654332 24566788899999999999999999998766554211
Q ss_pred CEEEEEEcCC----CCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEE--EECCCeEEEEECCCCc
Q 047260 676 LVNYICWDTN----GDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLV--VGGISSLELWNMAENK 748 (784)
Q Consensus 676 ~V~sl~~spd----g~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s--~s~dg~I~Iwdl~~~~ 748 (784)
....+++.+ +.++++..++.|+.||..+|+.+.++......+....+++++...+. ...++.++++|..+++
T Consensus 161 -~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 161 -YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVAVETLRYLTFMSGE 238 (369)
T ss_dssp -ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEEEEHHHHHHHHHHHHH
T ss_pred -ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccceeecccceeeeehhcCC
Confidence 122233332 45555444669999999999998887644332333344455532110 0113345556655544
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.18 E-value=2e-09 Score=128.11 Aligned_cols=264 Identities=11% Similarity=0.076 Sum_probs=174.4
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCCCCC----------e-EEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeee
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDHKSV----------V-TDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~----------I-t~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~ 587 (784)
+..|++++.++.|+.+|..+++.+..+..+... + ..+.+ .+..|++++.|+.|..+|.++++.+-..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 557777888999999999999998887543221 1 11222 3567888999999999999998854333
Q ss_pred ccC-CCCCeEEEEEcC--CCCcEEEEEe-----CCCeEEEEeCCCCeeEEeecC----C---------------------
Q 047260 588 YTG-HSSPIMSLDFHP--KKTDLFCFCD-----NDNEIQYWSINPFLCTHITKG----G--------------------- 634 (784)
Q Consensus 588 ~~~-h~~~V~sl~~sp--~~~~ll~sgs-----~dg~I~iwDl~~~~~~~~~~~----~--------------------- 634 (784)
... +......+...| .+..+++.++ .++.|+.||.++++.+..+.. +
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 222 111111111111 1232433322 368999999999887755431 0
Q ss_pred ---------eeEEEEecCCCEEEEEECCCc-------------------EEEEECCCCeEEEEEeC--CC-------CCE
Q 047260 635 ---------TAQVRFQPRIGQLLAAASDKV-------------------VSIFDIETDRQTHSLQG--HA-------ELV 677 (784)
Q Consensus 635 ---------v~~v~fsp~~~~Ll~~s~Dg~-------------------I~IwDl~t~~~i~~l~~--h~-------~~V 677 (784)
...++++|+.+.++++..++. |..+|.++++.+..+.. |. ..+
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~ 307 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHM 307 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCc
Confidence 024778999899999887753 99999999999988764 22 122
Q ss_pred EEEEEcCCCC---EEEEEeC-CeEEEEeCCCCceEEEeccCCC-------------------------------------
Q 047260 678 NYICWDTNGD---YLASVSQ-NLVKVWSMASGECIQELSSNGN------------------------------------- 716 (784)
Q Consensus 678 ~sl~~spdg~---~Lasgsd-d~I~IwDl~t~~~i~~l~~~~~------------------------------------- 716 (784)
.......+|+ +|+.++. +.|+++|.++|+.+........
T Consensus 308 ~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~G 387 (689)
T 1yiq_A 308 ILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWG 387 (689)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTC
T ss_pred EEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCccc
Confidence 2222233564 6666664 5999999999998754332110
Q ss_pred --ceEEEEEecCCCEEEEEEC---------------------------------------------CCeEEEEECCCCce
Q 047260 717 --QFHSCVFHPSYSTLLVVGG---------------------------------------------ISSLELWNMAENKS 749 (784)
Q Consensus 717 --~I~sl~fspdg~~L~s~s~---------------------------------------------dg~I~Iwdl~~~~~ 749 (784)
....++|+|+...+++... +|.|+.||+.+++.
T Consensus 388 g~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~ 467 (689)
T 1yiq_A 388 AHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA 467 (689)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE
T ss_pred ccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe
Confidence 0123688898887777632 37799999999998
Q ss_pred EEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 750 MTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 750 ~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+-...+...+....+...+.+|++++.||.|++||
T Consensus 468 ~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 468 AWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp EEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred EeEccCCCCccCccceECCCEEEEECCCCcEEEEE
Confidence 84444444444445666788999999999999986
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.17 E-value=4.6e-10 Score=123.12 Aligned_cols=244 Identities=8% Similarity=-0.019 Sum_probs=162.4
Q ss_pred eEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEe----------CCCeEEEEcCCCCcceeeeccCC-------C
Q 047260 530 KVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATAS----------VDKSVRLWDAANPNFCSQAYTGH-------S 592 (784)
Q Consensus 530 ~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs----------~Dg~I~IWdl~~~~~~~~~~~~h-------~ 592 (784)
+|.++|..+++.+.++.....+ .+.++||+++++++. .++.|.+||+.+.+.. ..+.-. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv-~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI-ADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE-EEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE-EEEECCCccccccC
Confidence 8999999999999998766566 799999999999886 3688999999998743 333211 1
Q ss_pred CCeEEEEEcCCCCcEEEEEeC-CCeEEE--EeCCCCeeEEeecCCeeEEEEecCCC-EEEEEECCCcEEEEECCC-----
Q 047260 593 SPIMSLDFHPKKTDLFCFCDN-DNEIQY--WSINPFLCTHITKGGTAQVRFQPRIG-QLLAAASDKVVSIFDIET----- 663 (784)
Q Consensus 593 ~~V~sl~~sp~~~~ll~sgs~-dg~I~i--wDl~~~~~~~~~~~~v~~v~fsp~~~-~Ll~~s~Dg~I~IwDl~t----- 663 (784)
.....+.++|++++++++... +..|.+ +|+.+ +.....+- ++.+.|++. .+++.+.|+.+.+.|+++
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~-~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS-CFHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS-CCCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC-ceEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 245689999999988777644 567888 89877 22222110 122345554 344556689999999987
Q ss_pred CeEEE----EEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCc--eEEEeccCC----------CceEEEEEecCC
Q 047260 664 DRQTH----SLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGE--CIQELSSNG----------NQFHSCVFHPSY 727 (784)
Q Consensus 664 ~~~i~----~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~--~i~~l~~~~----------~~I~sl~fspdg 727 (784)
++... .+.....+. .+..++.++++.. +.|.+.|+.+.. .+..+.... .....++++|++
T Consensus 200 ~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg 275 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT 275 (368)
T ss_dssp EECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT
T ss_pred CeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCC
Confidence 43321 111122333 3333444455555 889999986542 333222110 112227899999
Q ss_pred CEEEEEEC---------CCeEEEEECCCCceEEecccCCceEEEEEeCCCC-EEEEEE-CCCcEEEeC
Q 047260 728 STLLVVGG---------ISSLELWNMAENKSMTIAAHENIISALAQSPVTG-MVASAS-HDSSVKLWK 784 (784)
Q Consensus 728 ~~L~s~s~---------dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs-~DG~V~IWd 784 (784)
+.++++.. ++.+.++|+.+.+.+....-.....+|+|++|++ ++++.. .++.|.|+|
T Consensus 276 ~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 98887643 2456799999998874443334689999999997 566666 599999986
No 226
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.17 E-value=4.3e-10 Score=123.94 Aligned_cols=169 Identities=14% Similarity=0.079 Sum_probs=130.5
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe-------------eEEeecCCeeEEEEecCCCEEEEEECCCcEEEEE
Q 047260 594 PIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL-------------CTHITKGGTAQVRFQPRIGQLLAAASDKVVSIFD 660 (784)
Q Consensus 594 ~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~-------------~~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwD 660 (784)
.+..+++++... ++++|+.+ .+++|++.... ....+.. +..++| ++..|+++ .++.|++||
T Consensus 39 ~~nlLais~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688999999877 66667766 55669865322 2334456 999999 88888888 889999999
Q ss_pred CCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEE
Q 047260 661 IETDRQTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLE 740 (784)
Q Consensus 661 l~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~ 740 (784)
+++.........|...+.++.+.+.. ++++.+++.|.+||+.++.... +...|.+++|+|+| ++++..||+|+
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred chhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 98876666666778889888877653 4444456699999999887654 23579999999999 78899999999
Q ss_pred EEECCCCce---EEe------c---ccCCceEEEEEeCCCCEEEEEE
Q 047260 741 LWNMAENKS---MTI------A---AHENIISALAQSPVTGMVASAS 775 (784)
Q Consensus 741 Iwdl~~~~~---~~~------~---~h~~~V~slafspdg~~LaSgs 775 (784)
+|+...... .++ . +|...|.+|.|.+++.++++-+
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 999888773 234 2 3788999999999998887643
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.15 E-value=8.8e-09 Score=112.50 Aligned_cols=253 Identities=6% Similarity=0.027 Sum_probs=162.6
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCC---------CCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeecc
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDH---------KSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYT 589 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h---------~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~ 589 (784)
+..|++++.++.|..||.++++.+..+... ...+.+.. ..++..+++++.++.|..+|.++++..-. ..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~-~~ 130 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQ-TK 130 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEE-EE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEE-Ee
Confidence 567888888999999999999988766542 22232222 22456788889999999999998874322 22
Q ss_pred CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCC--e------eEEEEecCCCEEEEEECCCcEEEEEC
Q 047260 590 GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGG--T------AQVRFQPRIGQLLAAASDKVVSIFDI 661 (784)
Q Consensus 590 ~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~--v------~~v~fsp~~~~Ll~~s~Dg~I~IwDl 661 (784)
............ + . .+++++.++.|..+|..+++.+...... + ....+. +..+++++.++.|..+|.
T Consensus 131 ~~~~~~~~p~~~-~-~-~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 131 VAGEALSRPVVS-D-G-LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp CSSCCCSCCEEE-T-T-EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred CCCceEcCCEEE-C-C-EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence 221111112222 2 2 5667788999999999988777655432 1 111222 467888888999999999
Q ss_pred CCCeEEEEEeCCCCC----EE---EEEEcC--CCCEEEEEe-CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEE
Q 047260 662 ETDRQTHSLQGHAEL----VN---YICWDT--NGDYLASVS-QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLL 731 (784)
Q Consensus 662 ~t~~~i~~l~~h~~~----V~---sl~~sp--dg~~Lasgs-dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~ 731 (784)
++++.+......... +. .+...| .+..++.++ ++.|..+|..+++.+...... ....+.. ++..++
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~--~~~~l~ 281 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG--SVNDFIV--DGNRIY 281 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC--CEEEEEE--ETTEEE
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC--CCCCceE--ECCEEE
Confidence 999888776532110 00 011111 234455555 569999999999988776532 2344444 356789
Q ss_pred EEECCCeEEEEECCCCceEEecc--cCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 732 VVGGISSLELWNMAENKSMTIAA--HENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 732 s~s~dg~I~Iwdl~~~~~~~~~~--h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+++.++.|..+|..+++.+.... ....+...... +..|+.++.+|.|.+||
T Consensus 282 ~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 282 LVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp EEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSEEEEEE
T ss_pred EEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCeEEEEE
Confidence 99999999999999998773222 12223333332 56788888888888775
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.15 E-value=6.6e-09 Score=123.63 Aligned_cols=254 Identities=10% Similarity=0.040 Sum_probs=165.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCC--CCCeEEEEEcc---CCCEEEEEe------CCCeEEEEcCCCCcceeee
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDH--KSVVTDVRFRP---NSSQLATAS------VDKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h--~~~It~i~fsp---dg~~Latgs------~Dg~I~IWdl~~~~~~~~~ 587 (784)
+..|++++.|+.|+.+|.++++.+..+... ......+..+| ++ .+++++ .++.|+.||.++++..-..
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 557888889999999999999998776532 11111111122 44 444443 3789999999998843322
Q ss_pred ccC------------------------------CCCCeEEEEEcCCCCcEEEEEeCCC-------------------eEE
Q 047260 588 YTG------------------------------HSSPIMSLDFHPKKTDLFCFCDNDN-------------------EIQ 618 (784)
Q Consensus 588 ~~~------------------------------h~~~V~sl~~sp~~~~ll~sgs~dg-------------------~I~ 618 (784)
... +......+++.|+.. +++.+..++ .|.
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 210 001112567888766 566666665 499
Q ss_pred EEeCCCCeeEEeecC------------CeeEEEEecCCC---EEEEEECCCcEEEEECCCCeEEEEEeCCC-CC------
Q 047260 619 YWSINPFLCTHITKG------------GTAQVRFQPRIG---QLLAAASDKVVSIFDIETDRQTHSLQGHA-EL------ 676 (784)
Q Consensus 619 iwDl~~~~~~~~~~~------------~v~~v~fsp~~~---~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~-~~------ 676 (784)
.+|.++++.+..+.. ......+..++. .+++++.+|.|+++|.++++.+....... ..
T Consensus 279 AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~ 358 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDM 358 (689)
T ss_dssp EEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEET
T ss_pred EEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCc
Confidence 999999888765542 111122223444 67788889999999999999875443211 00
Q ss_pred --------------------------------EEEEEEcCCCCEEEEEe-------------------------------
Q 047260 677 --------------------------------VNYICWDTNGDYLASVS------------------------------- 693 (784)
Q Consensus 677 --------------------------------V~sl~~spdg~~Lasgs------------------------------- 693 (784)
...++++|+..++++..
T Consensus 359 ~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 438 (689)
T 1yiq_A 359 KTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGM 438 (689)
T ss_dssp TTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECC
T ss_pred cCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccc
Confidence 11267888877777652
Q ss_pred ---------------CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-Eeccc-C
Q 047260 694 ---------------QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAH-E 756 (784)
Q Consensus 694 ---------------dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h-~ 756 (784)
++.|+.||+.+++.+..+..+. .+....+...+..+++++.||.|+.||.++++.+ .+... .
T Consensus 439 ~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~ 517 (689)
T 1yiq_A 439 MPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASG 517 (689)
T ss_dssp CCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCC
Confidence 1469999999999998887653 2333466667889999999999999999999988 33322 2
Q ss_pred CceEEEEEeCCCC-EEEEEE
Q 047260 757 NIISALAQSPVTG-MVASAS 775 (784)
Q Consensus 757 ~~V~slafspdg~-~LaSgs 775 (784)
....-+.|..+|+ ++++.+
T Consensus 518 ~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 518 VMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp CCSCCEEEEETTEEEEEEEE
T ss_pred cccCceEEEECCEEEEEEEe
Confidence 2224466777887 444443
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=5.3e-09 Score=124.19 Aligned_cols=253 Identities=6% Similarity=-0.012 Sum_probs=168.5
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecCCC-C----CCeEEEEEccCCCEEEEEeC------CCeEEEEcCCCCcceee
Q 047260 518 DGKLLASSGHDRKVVLWNMDTLQTESTPEDH-K----SVVTDVRFRPNSSQLATASV------DKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 518 dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h-~----~~It~i~fspdg~~Latgs~------Dg~I~IWdl~~~~~~~~ 586 (784)
++..|++++.|+.|..+|..+++.+..+..+ . ..+...-.. .+..+++++. ++.|+.||..+++..-.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 3567888899999999999999998887654 1 122211111 2345555543 79999999999874432
Q ss_pred eccCCC-------------------------------CCeEEEEEcCCCCcEEEEEeCCC-------------------e
Q 047260 587 AYTGHS-------------------------------SPIMSLDFHPKKTDLFCFCDNDN-------------------E 616 (784)
Q Consensus 587 ~~~~h~-------------------------------~~V~sl~~sp~~~~ll~sgs~dg-------------------~ 616 (784)
...... .....+++++++. +++.+..++ .
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 221110 1113567888876 444554443 5
Q ss_pred EEEEeCCCCeeEEeecC------------CeeEEEEecCC---CEEEEEECCCcEEEEECCCCeEEEEEeCCCC------
Q 047260 617 IQYWSINPFLCTHITKG------------GTAQVRFQPRI---GQLLAAASDKVVSIFDIETDRQTHSLQGHAE------ 675 (784)
Q Consensus 617 I~iwDl~~~~~~~~~~~------------~v~~v~fsp~~---~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~------ 675 (784)
|..+|.++++.+..+.. ....+....++ ..+++++.+|.|+++|.++++.+..+.....
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 99999999887765431 11222333466 5688888899999999999998877653211
Q ss_pred -----CE------------------------EEEEEcCCCCEEEEEeC--------------------------------
Q 047260 676 -----LV------------------------NYICWDTNGDYLASVSQ-------------------------------- 694 (784)
Q Consensus 676 -----~V------------------------~sl~~spdg~~Lasgsd-------------------------------- 694 (784)
.+ ..++++|++.++++...
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 11 14678898887776431
Q ss_pred ------------CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEE-ec-ccCCceE
Q 047260 695 ------------NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMT-IA-AHENIIS 760 (784)
Q Consensus 695 ------------d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~-~~-~h~~~V~ 760 (784)
+.|..||+.+++.+.++... ..+....+...+..+++++.||.|++||..+++.+. +. .+.....
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~ 523 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAA 523 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccC
Confidence 47999999999998888643 344555677788889999999999999999999883 32 3322334
Q ss_pred EEEEeCCCCEEEE
Q 047260 761 ALAQSPVTGMVAS 773 (784)
Q Consensus 761 slafspdg~~LaS 773 (784)
-+.|..+|+.+++
T Consensus 524 p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 524 PSTYMVDGRQYVS 536 (677)
T ss_dssp CEEEEETTEEEEE
T ss_pred CEEEEeCCEEEEE
Confidence 4566677774443
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=4e-09 Score=125.27 Aligned_cols=262 Identities=12% Similarity=0.062 Sum_probs=178.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCCCCC-----------eEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeee
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDHKSV-----------VTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~-----------It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~ 587 (784)
+..|++++.++.|..+|..+++.+..+...... ...+++ ++..|++++.|+.|..+|..+++.+-..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 456777788899999999999998877543210 112333 4568888999999999999998854332
Q ss_pred ccCCC----CCeEE-EEEcCCCCcEEEEEe-----CCCeEEEEeCCCCeeEEeecC--C---------------------
Q 047260 588 YTGHS----SPIMS-LDFHPKKTDLFCFCD-----NDNEIQYWSINPFLCTHITKG--G--------------------- 634 (784)
Q Consensus 588 ~~~h~----~~V~s-l~~sp~~~~ll~sgs-----~dg~I~iwDl~~~~~~~~~~~--~--------------------- 634 (784)
-.... ..+.+ ..+. +..+++.++ .++.|+.||.++++.+..+.. .
T Consensus 155 ~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred cCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 22101 11111 1111 233443332 268999999998887755431 0
Q ss_pred ------------eeEEEEecCCCEEEEEECCC-------------------cEEEEECCCCeEEEEEeC--CC-------
Q 047260 635 ------------TAQVRFQPRIGQLLAAASDK-------------------VVSIFDIETDRQTHSLQG--HA------- 674 (784)
Q Consensus 635 ------------v~~v~fsp~~~~Ll~~s~Dg-------------------~I~IwDl~t~~~i~~l~~--h~------- 674 (784)
...++++++++.++++..++ .|..+|.++++.+..+.. |.
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~ 312 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST 312 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccC
Confidence 02467899999999887664 599999999999888764 21
Q ss_pred CCEEEEEEcCCC---CEEEEEeC-CeEEEEeCCCCceEEEeccCC-----------Cce---------------------
Q 047260 675 ELVNYICWDTNG---DYLASVSQ-NLVKVWSMASGECIQELSSNG-----------NQF--------------------- 718 (784)
Q Consensus 675 ~~V~sl~~spdg---~~Lasgsd-d~I~IwDl~t~~~i~~l~~~~-----------~~I--------------------- 718 (784)
.....+....+| ..|+.++. +.|+++|..+|+.+..+.... ..+
T Consensus 313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~ 392 (677)
T 1kb0_A 313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA 392 (677)
T ss_dssp SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred CCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccc
Confidence 112223333467 56777664 499999999999987765321 111
Q ss_pred ---EEEEEecCCCEEEEEECC-------------------------------------------CeEEEEECCCCceEEe
Q 047260 719 ---HSCVFHPSYSTLLVVGGI-------------------------------------------SSLELWNMAENKSMTI 752 (784)
Q Consensus 719 ---~sl~fspdg~~L~s~s~d-------------------------------------------g~I~Iwdl~~~~~~~~ 752 (784)
..++|+|+...+++...+ +.|..||+.+++.+-.
T Consensus 393 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 472 (677)
T 1kb0_A 393 HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS 472 (677)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE
T ss_pred cCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEee
Confidence 146889998888776431 7899999999998855
Q ss_pred cccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 753 AAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 753 ~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
..+..++....+..++.++++++.||.|++||
T Consensus 473 ~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 473 VEHVSPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp EEESSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred cCCCCCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 55555566666777888999999999999986
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.13 E-value=1.9e-09 Score=128.38 Aligned_cols=232 Identities=10% Similarity=0.104 Sum_probs=156.4
Q ss_pred CCCCCeEEEEEccCCCEEEEEe-----CCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCC-------
Q 047260 547 DHKSVVTDVRFRPNSSQLATAS-----VDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDND------- 614 (784)
Q Consensus 547 ~h~~~It~i~fspdg~~Latgs-----~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d------- 614 (784)
+|...+..++|+|||++||.+. .+..|+|||+.+++.....+.. .....++|+ |+..++++...+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 4566789999999999988543 2357999999998743332221 113567899 988776665442
Q ss_pred -----CeEEEEeCCCCe----eEEeecC----CeeEEEEecCCCEEEEEEC----CCcEEEEECCCCe-EEEEEeCCCCC
Q 047260 615 -----NEIQYWSINPFL----CTHITKG----GTAQVRFQPRIGQLLAAAS----DKVVSIFDIETDR-QTHSLQGHAEL 676 (784)
Q Consensus 615 -----g~I~iwDl~~~~----~~~~~~~----~v~~v~fsp~~~~Ll~~s~----Dg~I~IwDl~t~~-~i~~l~~h~~~ 676 (784)
..|++|++.+.. .+..... ....+.|+|++++|+.... +..|+++|+.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 349999997643 2332222 3567889999998876553 2589999998763 44556656665
Q ss_pred EEEEEEcCCCCEEEEEe-C----CeEEEEeCCCCce--EEEeccCCCceEEEEEecCCCEEEEEECCC---eEEEEECCC
Q 047260 677 VNYICWDTNGDYLASVS-Q----NLVKVWSMASGEC--IQELSSNGNQFHSCVFHPSYSTLLVVGGIS---SLELWNMAE 746 (784)
Q Consensus 677 V~sl~~spdg~~Lasgs-d----d~I~IwDl~t~~~--i~~l~~~~~~I~sl~fspdg~~L~s~s~dg---~I~Iwdl~~ 746 (784)
.... |+++|..|+..+ . ..|.++|+.++.. ...+..+...+. .|++++.+|+....++ .|++||+..
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 5555 566666555444 2 2799999988754 345555655554 8999999888776654 799999986
Q ss_pred CceEEec-ccCCceEEEEEeCCCCEEEEEECC----CcEEEeC
Q 047260 747 NKSMTIA-AHENIISALAQSPVTGMVASASHD----SSVKLWK 784 (784)
Q Consensus 747 ~~~~~~~-~h~~~V~slafspdg~~LaSgs~D----G~V~IWd 784 (784)
+....+. ...+.+..+.+++++..|+....+ +.|..||
T Consensus 360 ~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 360 KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 6554443 345677888888888765554433 6677665
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.09 E-value=1.3e-07 Score=98.09 Aligned_cols=244 Identities=10% Similarity=0.015 Sum_probs=159.0
Q ss_pred CEEEEEeCCCeEEEEECCCCcee-----eecCCCCCCeEEEEEccCCCEEEEEe-CCCeEEEEcCCCCcceeeeccCCCC
Q 047260 520 KLLASSGHDRKVVLWNMDTLQTE-----STPEDHKSVVTDVRFRPNSSQLATAS-VDKSVRLWDAANPNFCSQAYTGHSS 593 (784)
Q Consensus 520 ~~Lasgs~Dg~I~IWd~~t~~~~-----~~l~~h~~~It~i~fspdg~~Latgs-~Dg~I~IWdl~~~~~~~~~~~~h~~ 593 (784)
.+|+.+.. +.|+.++++..... ..+......+..++|++++..|+.+. .++.|.++++.... ..........
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-PTTIIRQDLG 79 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-CEEEECTTCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-cEEEEECCCC
Confidence 45555553 47888888754321 11111224578999999766565554 56899999997654 2222222235
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECC---CcEEEEECCCCeEE
Q 047260 594 PIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASD---KVVSIFDIETDRQT 667 (784)
Q Consensus 594 ~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~D---g~I~IwDl~t~~~i 667 (784)
....+++++++..++++....+.|.+++++......... .....++++|+++.|+++... +.|..+++.... .
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~ 158 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-R 158 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-C
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-c
Confidence 678999999877788877778899999997533222222 456789999988888777753 688888876432 2
Q ss_pred EEE-eCCCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEEC-CCeEEEEE
Q 047260 668 HSL-QGHAELVNYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGG-ISSLELWN 743 (784)
Q Consensus 668 ~~l-~~h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~-dg~I~Iwd 743 (784)
..+ .........+++++++..|+.+.. +.|.++|+........+.. ......+++. +..|+++.. .+.|.++|
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEe
Confidence 222 233346789999998877766663 3999999976543333332 2334566654 456666664 57999999
Q ss_pred CCCCceEEe-cccC-CceEEEEEeCCCC
Q 047260 744 MAENKSMTI-AAHE-NIISALAQSPVTG 769 (784)
Q Consensus 744 l~~~~~~~~-~~h~-~~V~slafspdg~ 769 (784)
..+++.+.. .... .....+++.|++.
T Consensus 236 ~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 236 LAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCCCceEEEccccccccceeeecCccC
Confidence 998887633 3222 2477888888764
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.05 E-value=2.2e-09 Score=114.16 Aligned_cols=254 Identities=7% Similarity=0.003 Sum_probs=166.9
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCC
Q 047260 513 CHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHS 592 (784)
Q Consensus 513 l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~ 592 (784)
..+..++. |.+++.++.|..|| .+++....+..+...+.++...+++. |+.++.+ |..+|. +++ ....+....
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~-~~~~~~~~~ 97 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGT-EKWRFDTKK 97 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGG-GGGGSCC--
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCc-EEEEEECCC
Confidence 34445554 56677788899999 88888777655555567777776664 5555554 888886 433 222222222
Q ss_pred CCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEE
Q 047260 593 SPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHS 669 (784)
Q Consensus 593 ~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~ 669 (784)
.......+. ++ .+..++.++.|..+|.. ++...... ..+.++.+.+++ .+++++.++.|..||.. ++.+..
T Consensus 98 ~~~~~~~~~-~~--~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~ 171 (330)
T 3hxj_A 98 AIVSDFTIF-ED--ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG-TIYVGSNDNYLYAINPD-GTEKWR 171 (330)
T ss_dssp ---CCEEEE-TT--EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-CEEEECTTSEEEEECTT-SCEEEE
T ss_pred CcccCceEE-CC--EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC-EEEEEcCCCEEEEECCC-CCEeEE
Confidence 222233333 32 46667778999999988 55443332 223455555554 47778888999999999 877777
Q ss_pred EeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCce
Q 047260 670 LQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKS 749 (784)
Q Consensus 670 l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~ 749 (784)
+......+.++...+++.++++. +.|..|| .+++.+..+......+.++.+.+++. |++++.++.|..+|......
T Consensus 172 ~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~~~ 247 (330)
T 3hxj_A 172 FKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDGTEK 247 (330)
T ss_dssp EECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTSCEE
T ss_pred EecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCCCEe
Confidence 76666677778888888866655 8899999 78888877776667788888888875 77777788888888544333
Q ss_pred EEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 750 MTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 750 ~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.........+.++.+.+++ .|..++.+|.|..+|
T Consensus 248 ~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 248 WRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAIN 281 (330)
T ss_dssp EEEECSSCCCSCCEECTTS-CEEEECTTCEEEEEC
T ss_pred EEeeCCCCccccceEcCCC-eEEEecCCCCEEEEC
Confidence 3444444444556665555 455677777777765
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.97 E-value=4.9e-07 Score=100.22 Aligned_cols=215 Identities=10% Similarity=0.087 Sum_probs=147.3
Q ss_pred CCCCEEEE-EeCCCeEEEEECCCC----ceeeecC------C-CCCCeEEEEEccCCCEEEEEeCC------CeEEEEcC
Q 047260 517 SDGKLLAS-SGHDRKVVLWNMDTL----QTESTPE------D-HKSVVTDVRFRPNSSQLATASVD------KSVRLWDA 578 (784)
Q Consensus 517 pdg~~Las-gs~Dg~I~IWd~~t~----~~~~~l~------~-h~~~It~i~fspdg~~Latgs~D------g~I~IWdl 578 (784)
.++++|++ +..++.|.|+|+.+. +.+++++ . ....-..+...|++ +++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 78887765 556788999999755 5555552 1 11245667888999 77776665 78999999
Q ss_pred CCCcceeeecc-C-CC-CCeEEEEEcCCCCcEEEEEe-------------------CCCeEEEEeCCCCeeEEeecCC--
Q 047260 579 ANPNFCSQAYT-G-HS-SPIMSLDFHPKKTDLFCFCD-------------------NDNEIQYWSINPFLCTHITKGG-- 634 (784)
Q Consensus 579 ~~~~~~~~~~~-~-h~-~~V~sl~~sp~~~~ll~sgs-------------------~dg~I~iwDl~~~~~~~~~~~~-- 634 (784)
++.+ ++..+. + .. ..-..+.|+|+++ .+++.. .+..|.+||+.+.+.+..+.-.
T Consensus 172 ~T~~-v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 172 YSFE-PLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TTCC-EEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CCCe-EEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 9877 444443 2 11 2244688899988 444443 3789999999987776665532
Q ss_pred ---eeEEEE--ecCCCEEEEEEC------CCcEEEEECCCCeE--EEEE--eCC----------------CCCEEEEEEc
Q 047260 635 ---TAQVRF--QPRIGQLLAAAS------DKVVSIFDIETDRQ--THSL--QGH----------------AELVNYICWD 683 (784)
Q Consensus 635 ---v~~v~f--sp~~~~Ll~~s~------Dg~I~IwDl~t~~~--i~~l--~~h----------------~~~V~sl~~s 683 (784)
...+.| +|+++++++++. ++.|.+|....++. ...+ ... ......|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 344555 999999888874 56888776654421 1111 110 2346789999
Q ss_pred CCCCEEEEEeC--CeEEEEeCCC---CceEEEeccCCC--------------ceEEEEEecCCCEEEEEE
Q 047260 684 TNGDYLASVSQ--NLVKVWSMAS---GECIQELSSNGN--------------QFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 684 pdg~~Lasgsd--d~I~IwDl~t---~~~i~~l~~~~~--------------~I~sl~fspdg~~L~s~s 734 (784)
+||++|.++.. +.|.+||+.. .+.+..+...+. .-..+.++|+|++|+++.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999999884 4999999863 355555543311 358899999999999998
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.97 E-value=2.1e-07 Score=103.24 Aligned_cols=215 Identities=8% Similarity=-0.019 Sum_probs=146.5
Q ss_pred cCCCEEEEE-eCCCeEEEEcCCCCc---ceeeecc------C-CCCCeEEEEEcCCCCcEEEEEeCC------CeEEEEe
Q 047260 559 PNSSQLATA-SVDKSVRLWDAANPN---FCSQAYT------G-HSSPIMSLDFHPKKTDLFCFCDND------NEIQYWS 621 (784)
Q Consensus 559 pdg~~Latg-s~Dg~I~IWdl~~~~---~~~~~~~------~-h~~~V~sl~~sp~~~~ll~sgs~d------g~I~iwD 621 (784)
.+.++|++. ..++.|.|+|+.+.. ...+++. . .......+...|++ +++++..+ +.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEE
Confidence 777777664 457889999997541 1233331 0 11234567788998 56565544 7899999
Q ss_pred CCCCeeEEeecCC------eeEEEEecCCCEEEEEE-------------------CCCcEEEEECCCCeEEEEEeCC-C-
Q 047260 622 INPFLCTHITKGG------TAQVRFQPRIGQLLAAA-------------------SDKVVSIFDIETDRQTHSLQGH-A- 674 (784)
Q Consensus 622 l~~~~~~~~~~~~------v~~v~fsp~~~~Ll~~s-------------------~Dg~I~IwDl~t~~~i~~l~~h-~- 674 (784)
..+.+.+...... ...+.|+|+++.+++.. .+..|.+||+.+++.+.++... .
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 9998888777622 34588899999888874 3689999999999888888753 2
Q ss_pred CCEEEEEE--cCCCCEEEEEeC-----C--eEEEEeCCCCc--eEEEe--ccC----------------CCceEEEEEec
Q 047260 675 ELVNYICW--DTNGDYLASVSQ-----N--LVKVWSMASGE--CIQEL--SSN----------------GNQFHSCVFHP 725 (784)
Q Consensus 675 ~~V~sl~~--spdg~~Lasgsd-----d--~I~IwDl~t~~--~i~~l--~~~----------------~~~I~sl~fsp 725 (784)
.....+.| +|++++++++.+ . +|.+|....++ .+..+ ... ......+.+++
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23445555 999998887765 3 77776655442 11211 110 24568899999
Q ss_pred CCCEEEEEECC-CeEEEEECCCC---ceEEecccC---------------CceEEEEEeCCCCEEEEEE
Q 047260 726 SYSTLLVVGGI-SSLELWNMAEN---KSMTIAAHE---------------NIISALAQSPVTGMVASAS 775 (784)
Q Consensus 726 dg~~L~s~s~d-g~I~Iwdl~~~---~~~~~~~h~---------------~~V~slafspdg~~LaSgs 775 (784)
|+++|+++... +.|.+||+... +.+....-. +....++++|||++|+++.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999888874 79999998643 222111111 1368899999999999887
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.95 E-value=1.4e-08 Score=109.97 Aligned_cols=226 Identities=10% Similarity=-0.011 Sum_probs=146.7
Q ss_pred cCCCceEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCceeeecCC------CCCCeEEEEEccCCCEE-EEEe---C
Q 047260 505 SRNSKVTCCHFSSDGKLLASSGH-----DRKVVLWNMDTLQTESTPED------HKSVVTDVRFRPNSSQL-ATAS---V 569 (784)
Q Consensus 505 ~H~~~V~~l~fspdg~~Lasgs~-----Dg~I~IWd~~t~~~~~~l~~------h~~~It~i~fspdg~~L-atgs---~ 569 (784)
.|-..+.+++|+++++++++-.. ++.|.+||+.+++.+..+.. +...+..+++++++..+ ++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999986665443 57899999998887665532 23456899999865454 5544 5
Q ss_pred CCeEEEEcCCCCcceeeeccCCCCCeE-EEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEE
Q 047260 570 DKSVRLWDAANPNFCSQAYTGHSSPIM-SLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLL 648 (784)
Q Consensus 570 Dg~I~IWdl~~~~~~~~~~~~h~~~V~-sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll 648 (784)
++.|.+||+.+++ ..+.+.+|..... ...+.+++. .+.+.+.++.++.|. ..+..++|+|+++.|+
T Consensus 144 ~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~-----------~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 144 KAALIRVDLQTGL-AARVLQGYPGIAPEDIDLVIDGV-PVQIGQPDGTVIRPH-----------LGVNGIVLDAENEWLY 210 (343)
T ss_dssp GCEEEEEETTTCC-EEEECTTCTTTSCCSCCCEETTE-ECBEECTTSCEECCC-----------CCEEEEEECTTSCEEE
T ss_pred CCeEEEEECCCCC-EEEEecCCCcccccccceeECCE-EEEeccCCCceecee-----------cccceeEeccCCCEEE
Confidence 7899999998766 4444444322110 023333443 444556677766553 2467799999999999
Q ss_pred EEECCC-cEEEEECC---CCe-----EE--EEEeCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEecc-CC
Q 047260 649 AAASDK-VVSIFDIE---TDR-----QT--HSLQGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSS-NG 715 (784)
Q Consensus 649 ~~s~Dg-~I~IwDl~---t~~-----~i--~~l~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~-~~ 715 (784)
++..++ .|..++.. .+. .. ....++......++++++|.++++...+ .|.+||..+++....... ..
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~ 290 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKL 290 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGG
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCce
Confidence 888765 56666532 110 00 0111233455678999999988887754 999999866664333322 23
Q ss_pred CceEEEEEecCCCEEEEEECCCeEEEEE
Q 047260 716 NQFHSCVFHPSYSTLLVVGGISSLELWN 743 (784)
Q Consensus 716 ~~I~sl~fspdg~~L~s~s~dg~I~Iwd 743 (784)
..+.+|+|.+++..+++.+..+.+.+|.
T Consensus 291 ~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 291 SWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp SCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred ecCCeeEECCCCcEEEEeCccccccccc
Confidence 4578999999988777766555554443
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.93 E-value=4.1e-10 Score=123.73 Aligned_cols=199 Identities=10% Similarity=0.016 Sum_probs=110.7
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCee---
Q 047260 560 NSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTA--- 636 (784)
Q Consensus 560 dg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~--- 636 (784)
++..|++++.|+.|+.||..+++.. ..+.. +.+.+..+..++. ++++++.|+.|+.||..+++.+........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~-W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIK-WTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEE-EEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEE-EEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 5778999999999999999998743 33333 3444444555554 566677899999999987766544432210
Q ss_pred --EEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC-CeEEEEeCCCCceEEEecc
Q 047260 637 --QVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ-NLVKVWSMASGECIQELSS 713 (784)
Q Consensus 637 --~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd-d~I~IwDl~t~~~i~~l~~ 713 (784)
...+ ..++.+++++.++.|+.||.++++.+..+..+. .+.++|++..|++++. +.|+.||.++++.+..+..
T Consensus 84 ~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 84 QASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred ccCceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 0111 134677888889999999999999888776543 2345567777777764 5999999999987766542
Q ss_pred CCCceEEEEEecCC---CEEEEEECCCeEEEEECCCCceEEecccCCceEE-EEEeCCCC
Q 047260 714 NGNQFHSCVFHPSY---STLLVVGGISSLELWNMAENKSMTIAAHENIISA-LAQSPVTG 769 (784)
Q Consensus 714 ~~~~I~sl~fspdg---~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V~s-lafspdg~ 769 (784)
.. ....++.++. ..+++++.+|.|+.||..+++.+.......++.. ..+++++.
T Consensus 159 ~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 159 FD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp EE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSC
T ss_pred cc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCce
Confidence 21 1222333332 5688889999999999999988744444555543 34445553
No 238
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=1.4e-07 Score=111.71 Aligned_cols=262 Identities=11% Similarity=0.077 Sum_probs=169.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCCCCC----------e-EEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeee
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDHKSV----------V-TDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~----------I-t~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~ 587 (784)
+..|++++.++.|..+|..+++.+..+...... + ..+.+ .+..|++++.|+.|..+|.++++.+-..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 456777888999999999999998887543211 1 11222 3557888889999999999998854333
Q ss_pred ccCCC---CCeEE-EEEcCCCCcEEEEEe-----CCCeEEEEeCCCCeeEEeecC----C--------------------
Q 047260 588 YTGHS---SPIMS-LDFHPKKTDLFCFCD-----NDNEIQYWSINPFLCTHITKG----G-------------------- 634 (784)
Q Consensus 588 ~~~h~---~~V~s-l~~sp~~~~ll~sgs-----~dg~I~iwDl~~~~~~~~~~~----~-------------------- 634 (784)
..... ..+.+ ..+. +..+++.++ .+|.|+.+|.++++.+..+.. +
T Consensus 144 ~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp ECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred ccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 22111 11110 1111 232333322 258999999999887765531 0
Q ss_pred ----------eeEEEEecCCCEEEEEECCC-------------------cEEEEECCCCeEEEEEeC--CC-------CC
Q 047260 635 ----------TAQVRFQPRIGQLLAAASDK-------------------VVSIFDIETDRQTHSLQG--HA-------EL 676 (784)
Q Consensus 635 ----------v~~v~fsp~~~~Ll~~s~Dg-------------------~I~IwDl~t~~~i~~l~~--h~-------~~ 676 (784)
...+++.+..+.++++..++ .|..+|.++++.+..+.. |. .+
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 01367888888888887765 399999999999888764 22 22
Q ss_pred EEEEEEcCCCC---EEEEEe-CCeEEEEeCCCCceEEEeccCC------------Cc-----------------------
Q 047260 677 VNYICWDTNGD---YLASVS-QNLVKVWSMASGECIQELSSNG------------NQ----------------------- 717 (784)
Q Consensus 677 V~sl~~spdg~---~Lasgs-dd~I~IwDl~t~~~i~~l~~~~------------~~----------------------- 717 (784)
.....+..+|+ +|+.++ ++.++++|..+|+.+..+.... .+
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~ 381 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH 381 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence 33333334665 566666 4499999999999885443211 00
Q ss_pred -eEEEEEecCCCEEEEEE------------------------------------CCCeEEEEECCCCceEEecccCCceE
Q 047260 718 -FHSCVFHPSYSTLLVVG------------------------------------GISSLELWNMAENKSMTIAAHENIIS 760 (784)
Q Consensus 718 -I~sl~fspdg~~L~s~s------------------------------------~dg~I~Iwdl~~~~~~~~~~h~~~V~ 760 (784)
-..++++|+...+++.. .+|.|..||+.+++.+-...+...+.
T Consensus 382 ~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 461 (668)
T 1kv9_A 382 NWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWN 461 (668)
T ss_dssp CSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred CCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCc
Confidence 01267788777666521 23789999999999873333333444
Q ss_pred EEEEeCCCCEEEEEECCCcEEEeC
Q 047260 761 ALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 761 slafspdg~~LaSgs~DG~V~IWd 784 (784)
...+...+.+|++++.||.|++||
T Consensus 462 ~~~~~t~gg~vf~g~~dg~l~a~d 485 (668)
T 1kv9_A 462 GGTLSTAGNLVFQGTAAGQMHAYS 485 (668)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEE
T ss_pred CceeEeCCCEEEEECCcccchhhh
Confidence 444555688999999999999986
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.92 E-value=3.8e-08 Score=112.66 Aligned_cols=252 Identities=12% Similarity=0.066 Sum_probs=168.7
Q ss_pred EEEEeCCCeEEEEECCCCceeeecCC---------------------------------C------CCCeEEEEEcc---
Q 047260 522 LASSGHDRKVVLWNMDTLQTESTPED---------------------------------H------KSVVTDVRFRP--- 559 (784)
Q Consensus 522 Lasgs~Dg~I~IWd~~t~~~~~~l~~---------------------------------h------~~~It~i~fsp--- 559 (784)
|.+|+..|.|+|+-+.+++.+..+.. + .+.......+.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 56678888888887777665544310 0 11222345554
Q ss_pred --CCCEEEEEeC-CCeEEEEcCCCCcceeeecc-CCCCCeEEEEE-c-CCCCcEEEEE-----------------eCCCe
Q 047260 560 --NSSQLATASV-DKSVRLWDAANPNFCSQAYT-GHSSPIMSLDF-H-PKKTDLFCFC-----------------DNDNE 616 (784)
Q Consensus 560 --dg~~Latgs~-Dg~I~IWdl~~~~~~~~~~~-~h~~~V~sl~~-s-p~~~~ll~sg-----------------s~dg~ 616 (784)
||++|+.+.. +..|.+.|+++.+ +..++. .....+..+++ . |++.++++.+ ..++.
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~-~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMK-CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTE-EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCce-EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 7888877765 4579999999876 344222 22345788887 4 8998777765 23568
Q ss_pred EEEEeCCCCeeEEeec--CCeeEEEEecCCCEEEEEECCC--------------------------------------cE
Q 047260 617 IQYWSINPFLCTHITK--GGTAQVRFQPRIGQLLAAASDK--------------------------------------VV 656 (784)
Q Consensus 617 I~iwDl~~~~~~~~~~--~~v~~v~fsp~~~~Ll~~s~Dg--------------------------------------~I 656 (784)
+.++|..+.+...... +...-++++|+++++++++.+. .|
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 9999999887766554 4456688999999999988643 47
Q ss_pred EEEECCC--CeE-EEEEeCCCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCc------------eEEEeccCCCceE
Q 047260 657 SIFDIET--DRQ-THSLQGHAELVNYICWDTNGDYLASVSQ--NLVKVWSMASGE------------CIQELSSNGNQFH 719 (784)
Q Consensus 657 ~IwDl~t--~~~-i~~l~~h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~------------~i~~l~~~~~~I~ 719 (784)
.|.|.++ ++. +..+.. .....++.++|||+++++++. +.|.++|+.+.+ .+.++ .-+....
T Consensus 257 ~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~ 334 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPL 334 (595)
T ss_dssp EEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEE
T ss_pred EEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcc
Confidence 7777776 444 444432 234467899999999999884 499999998653 33344 3345578
Q ss_pred EEEEecCCCEEEEEECCCeEEEEECCC----------CceE-EecccCCce-----EEEEEeCCCCEEEEEEC
Q 047260 720 SCVFHPSYSTLLVVGGISSLELWNMAE----------NKSM-TIAAHENII-----SALAQSPVTGMVASASH 776 (784)
Q Consensus 720 sl~fspdg~~L~s~s~dg~I~Iwdl~~----------~~~~-~~~~h~~~V-----~slafspdg~~LaSgs~ 776 (784)
.++|+|+|...++..-|+.|.+||+.. ...+ ++..|-.+- .++.++|||++|++++.
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 999999993334445578999999877 3333 344443321 22345799999998864
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.91 E-value=2.4e-07 Score=96.60 Aligned_cols=204 Identities=10% Similarity=0.016 Sum_probs=145.4
Q ss_pred ceeeecCCCCC--CeEEEEEccCCCEEEEEeC--CCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCC
Q 047260 540 QTESTPEDHKS--VVTDVRFRPNSSQLATASV--DKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDN 615 (784)
Q Consensus 540 ~~~~~l~~h~~--~It~i~fspdg~~Latgs~--Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg 615 (784)
+.+.++ .|.. ....+.|++++.++++.+. ++.|+++|+.+++.......+.......+++. +..++++...++
T Consensus 10 ~vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 344555 3443 3678999998654444443 57999999999884443322222233455555 556888888899
Q ss_pred eEEEEeCCCCeeEEeecCC-eeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCC-----CCEEEEEEcCCCCEE
Q 047260 616 EIQYWSINPFLCTHITKGG-TAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHA-----ELVNYICWDTNGDYL 689 (784)
Q Consensus 616 ~I~iwDl~~~~~~~~~~~~-v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~-----~~V~sl~~spdg~~L 689 (784)
.+.++|..+.+.+..+... .....++++++.++++..++.|.++|..+.+.+..+.-.. ..++.+.|. +|+++
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ly 165 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVW 165 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEE
Confidence 9999999998888777533 3345577788888888888999999999998888876321 246778887 67555
Q ss_pred EEEe-CCeEEEEeCCCCceEEEeccC-------------CCceEEEEEecCCCEEEEEEC-CCeEEEEECCCC
Q 047260 690 ASVS-QNLVKVWSMASGECIQELSSN-------------GNQFHSCVFHPSYSTLLVVGG-ISSLELWNMAEN 747 (784)
Q Consensus 690 asgs-dd~I~IwDl~t~~~i~~l~~~-------------~~~I~sl~fspdg~~L~s~s~-dg~I~Iwdl~~~ 747 (784)
+... .+.|.+.|..+++.+..+... ....+.++|+|+++.+++++. .++|.+.++...
T Consensus 166 vn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 166 ANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 5443 459999999999999888642 135689999999987776664 578888887654
No 241
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.89 E-value=4.2e-06 Score=100.94 Aligned_cols=266 Identities=9% Similarity=0.050 Sum_probs=180.1
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecC-------CCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCC
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPE-------DHKSVVTDVRFRPNSSQLATASVDKSVRLWDAA 579 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~-------~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~ 579 (784)
...|.++...++|.+.+ |+.+ -|.+||..+........ -....|.++...++|. |..|+.++-|.+|+..
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI 338 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence 45699999998887554 5555 48999988765543321 1235799999998886 6667777789999876
Q ss_pred CCcceeeecc-----CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee-----------cCCeeEEEEecC
Q 047260 580 NPNFCSQAYT-----GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT-----------KGGTAQVRFQPR 643 (784)
Q Consensus 580 ~~~~~~~~~~-----~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~-----------~~~v~~v~fsp~ 643 (784)
+......... -....|.++...+++. +..|+.++-|..||..+....... ...|.++...++
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp GGSSEEECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT
T ss_pred cccceEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence 5432111110 1235699999888775 444677778999998765443321 245677888877
Q ss_pred CCEEEEEECCCcEEEEECCCCeEEEEEe----CCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEecc------
Q 047260 644 IGQLLAAASDKVVSIFDIETDRQTHSLQ----GHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSS------ 713 (784)
Q Consensus 644 ~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~----~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~------ 713 (784)
+..|.+|+.++-|.+||..+++...... .....|.++..+++|.+.++.. +.|.+||..+++.......
T Consensus 417 g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~ 495 (795)
T 4a2l_A 417 KSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPV 495 (795)
T ss_dssp TTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBC
T ss_pred CCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEcccccccccc
Confidence 7658888888889999998876543322 1345799999999998777665 6688999887754332211
Q ss_pred CCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEec-------ccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 714 NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIA-------AHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 714 ~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~-------~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
....|.++...+++. |.+++. +.|.+||..+++. .+. .....|.++...++|.+.++.. +| |..|
T Consensus 496 ~~~~i~~i~~d~~g~-lWigt~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~G-l~~~ 567 (795)
T 4a2l_A 496 VSKQITTLFRDSHKR-LWIGGE-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EG-FYCF 567 (795)
T ss_dssp CCCCEEEEEECTTCC-EEEEES-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SC-EEEE
T ss_pred CCceEEEEEECCCCC-EEEEeC-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CC-ceeE
Confidence 235688898888887 455555 5688999877665 322 2345789999998888666543 34 4444
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.88 E-value=4.1e-06 Score=101.10 Aligned_cols=266 Identities=6% Similarity=0.039 Sum_probs=177.7
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeec-CCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeec
Q 047260 510 VTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTP-EDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAY 588 (784)
Q Consensus 510 V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l-~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~ 588 (784)
|.++...+++.+.+ ++.++-|..|+..+.+..... ..+...|.+|...+++. |..++.++-|.+||..+........
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeec
Confidence 88898888886555 666555999998776654332 12356789998887776 4445555458889987654221111
Q ss_pred c------CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee----------cCCeeEEEEecCCCEEEEEEC
Q 047260 589 T------GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT----------KGGTAQVRFQPRIGQLLAAAS 652 (784)
Q Consensus 589 ~------~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~----------~~~v~~v~fsp~~~~Ll~~s~ 652 (784)
. -....|.++...+++. +.+ |..+ -|.+||..+....... ...|.++...+++ .|.+|+.
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~-lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~lWigt~ 328 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNR-LWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG-GMWLGTY 328 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSC-EEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS-CEEEEES
T ss_pred CCCCccccCCCeEEEEEEcCCCC-EEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc-CEEEEEC
Confidence 1 1235699999888876 333 4444 5888998776554432 1457778777765 4777888
Q ss_pred CCcEEEEECCCCeEEEEEeC------CCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEecc--------CCCce
Q 047260 653 DKVVSIFDIETDRQTHSLQG------HAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSS--------NGNQF 718 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~l~~------h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~--------~~~~I 718 (784)
++-|..|+..+......... ....|.+++.+++|.+.+...++-|..||..++........ ....|
T Consensus 329 ~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 408 (795)
T 4a2l_A 329 FGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNI 408 (795)
T ss_dssp SSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCE
T ss_pred CCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccE
Confidence 88899998766543221110 24569999999999877655555899999887755433211 23568
Q ss_pred EEEEEecCCCEEEEEECCCeEEEEECCCCceEEecc-----cCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 719 HSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAA-----HENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 719 ~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~-----h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
.+++..+++..|.+|+.++.|.+||..+++...+.. +...|.++...+++.+.+.. .+| |.+|
T Consensus 409 ~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~ 476 (795)
T 4a2l_A 409 KAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-LVRF 476 (795)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEE
T ss_pred EEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEE
Confidence 899988888767788887789999998887665432 34579999988888766644 444 5544
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.87 E-value=2.6e-06 Score=88.18 Aligned_cols=216 Identities=9% Similarity=0.026 Sum_probs=145.4
Q ss_pred ceEEEEEcCCCCEEEEE-eCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEE-eCCCeEEEEcCCCCcceee
Q 047260 509 KVTCCHFSSDGKLLASS-GHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATA-SVDKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasg-s~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latg-s~Dg~I~IWdl~~~~~~~~ 586 (784)
.+.+++|++++..|+.+ ..++.|.+++.+.......+.........+++++++..|+.+ ...+.|.+++++... ...
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~ 115 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRV 115 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEE
Confidence 57899999976655544 456899999998655444333333578899999976555554 456789999987533 222
Q ss_pred eccCCCCCeEEEEEcCCCCcEEEEEeC--CCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC-CCcEEEEE
Q 047260 587 AYTGHSSPIMSLDFHPKKTDLFCFCDN--DNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS-DKVVSIFD 660 (784)
Q Consensus 587 ~~~~h~~~V~sl~~sp~~~~ll~sgs~--dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwD 660 (784)
...........++++|++..++++... .+.|..++++......... .....++++++++.|+++.. .+.|.++|
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 222222467899999977767666544 4789888887533222221 34678999999888887776 58999999
Q ss_pred CCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe-C-CeEEEEeCCCCceEEEeccCC-CceEEEEEecCCC
Q 047260 661 IETDRQTHSLQGHAELVNYICWDTNGDYLASVS-Q-NLVKVWSMASGECIQELSSNG-NQFHSCVFHPSYS 728 (784)
Q Consensus 661 l~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs-d-d~I~IwDl~t~~~i~~l~~~~-~~I~sl~fspdg~ 728 (784)
.........+.. ......++.. +..|+.+. . +.|.++|..+++.+.++.... .....+++.|++.
T Consensus 196 ~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 196 PAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred cCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 986544433433 2334566664 44555554 3 499999999999988886543 2467788888764
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.86 E-value=1.7e-06 Score=92.39 Aligned_cols=236 Identities=11% Similarity=0.039 Sum_probs=149.1
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCC-------------------CCCCeEEEEEcc-CCCEEEEE
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPED-------------------HKSVVTDVRFRP-NSSQLATA 567 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~-------------------h~~~It~i~fsp-dg~~Latg 567 (784)
....+++|++++++++++..++.|..||..+++....... ....+..|++.+ ++ .|+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEE
Confidence 3467788999999788888899999999876543321100 013578999997 55 45666
Q ss_pred eCCCeEEEEcCCCCcceee--eccC-CCCCeEEEEEcC-CCCcEEEEEeC-----------------CCeEEEEeCCCCe
Q 047260 568 SVDKSVRLWDAANPNFCSQ--AYTG-HSSPIMSLDFHP-KKTDLFCFCDN-----------------DNEIQYWSINPFL 626 (784)
Q Consensus 568 s~Dg~I~IWdl~~~~~~~~--~~~~-h~~~V~sl~~sp-~~~~ll~sgs~-----------------dg~I~iwDl~~~~ 626 (784)
...+.|.++|..++..... ...+ .......+++.+ ++. ++++... ++.|..||..+..
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 5556688888775431111 1111 123468899999 775 5554322 3678899987655
Q ss_pred eEEeec--CCeeEEEEecCCCEEEEEEC-CCcEEEEECCCCe--EEEEEeCCCCCEEEEEEcCCCCEEEEEeC-------
Q 047260 627 CTHITK--GGTAQVRFQPRIGQLLAAAS-DKVVSIFDIETDR--QTHSLQGHAELVNYICWDTNGDYLASVSQ------- 694 (784)
Q Consensus 627 ~~~~~~--~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~--~i~~l~~h~~~V~sl~~spdg~~Lasgsd------- 694 (784)
...... .....++++++++.|+++.. .+.|.+||+.... ....+....+ ...++++++|+++++...
T Consensus 177 ~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 177 TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMH 255 (322)
T ss_dssp EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTT
T ss_pred EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccccc
Confidence 432222 44567999999998877755 6899999987421 1112211223 788999999998777654
Q ss_pred ----CeEEEEeCCCCceEEEeccCC----CceEEEEEecCCCEEEEEECCCeEEEEECCCCc
Q 047260 695 ----NLVKVWSMASGECIQELSSNG----NQFHSCVFHPSYSTLLVVGGISSLELWNMAENK 748 (784)
Q Consensus 695 ----d~I~IwDl~t~~~i~~l~~~~----~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~ 748 (784)
+.|.++|. .++.+..+.... ..+..+++. ++..+++....+.|.++++....
T Consensus 256 ~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 256 GRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp SCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEEEC----
T ss_pred CCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEEeccccc
Confidence 36888886 477777775442 346666663 44434444456789999876543
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.81 E-value=4.2e-07 Score=105.61 Aligned_cols=260 Identities=11% Similarity=0.098 Sum_probs=164.9
Q ss_pred CCEEEEEeC-CCeEEEEEC-CCCceeeecCCCCC-C---------e-EEEEEccCCCEEEEEeCCCeEEEEcCCCCccee
Q 047260 519 GKLLASSGH-DRKVVLWNM-DTLQTESTPEDHKS-V---------V-TDVRFRPNSSQLATASVDKSVRLWDAANPNFCS 585 (784)
Q Consensus 519 g~~Lasgs~-Dg~I~IWd~-~t~~~~~~l~~h~~-~---------I-t~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~ 585 (784)
+..|++++. ++.|..+|. .+++.+..+..... . + ..+.+ .+..|++++.|+.|..+|..+++.+-
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 445666676 889999999 89998877643221 0 0 11222 35678888899999999999987543
Q ss_pred eeccCC-C--CCeE-EEEEcCCCCcEEEEEeC------CCeEEEEeCCCCeeEEeecCC--e------------------
Q 047260 586 QAYTGH-S--SPIM-SLDFHPKKTDLFCFCDN------DNEIQYWSINPFLCTHITKGG--T------------------ 635 (784)
Q Consensus 586 ~~~~~h-~--~~V~-sl~~sp~~~~ll~sgs~------dg~I~iwDl~~~~~~~~~~~~--v------------------ 635 (784)
..-... . ..+. ..... +. .++++.. ++.|+.+|.++++.+..+... .
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~--~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA--KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE--TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EecCCCCCccceeccCCEEE--CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 322111 0 0111 11111 23 3444443 789999999988877554321 1
Q ss_pred ---------------------eEEEEecCCCEEEEEECC----------------CcEEEEECCCCeEEEEEeCC--C--
Q 047260 636 ---------------------AQVRFQPRIGQLLAAASD----------------KVVSIFDIETDRQTHSLQGH--A-- 674 (784)
Q Consensus 636 ---------------------~~v~fsp~~~~Ll~~s~D----------------g~I~IwDl~t~~~i~~l~~h--~-- 674 (784)
..+++.+..+.++++..+ +.|..+|.++++.+..+... .
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 135677777788777642 35999999999998887632 1
Q ss_pred ------CCEEEEEEcCCCC---EEEEEeC-CeEEEEeCCCCceEEEeccCC-------------Cce-------------
Q 047260 675 ------ELVNYICWDTNGD---YLASVSQ-NLVKVWSMASGECIQELSSNG-------------NQF------------- 718 (784)
Q Consensus 675 ------~~V~sl~~spdg~---~Lasgsd-d~I~IwDl~t~~~i~~l~~~~-------------~~I------------- 718 (784)
.++. +....+|+ +++.++. +.++++|..+|+.+..+.... .++
T Consensus 297 d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~ 375 (571)
T 2ad6_A 297 DFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKG 375 (571)
T ss_dssp CCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCE
T ss_pred ccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCc
Confidence 1221 22224674 5556664 499999999999887764321 111
Q ss_pred -------------EEEEEecCCCEEEEEE-------------------------------------CCCeEEEEECCCCc
Q 047260 719 -------------HSCVFHPSYSTLLVVG-------------------------------------GISSLELWNMAENK 748 (784)
Q Consensus 719 -------------~sl~fspdg~~L~s~s-------------------------------------~dg~I~Iwdl~~~~ 748 (784)
..++++|+...+++.. .+|.|..||+.+++
T Consensus 376 ~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~ 455 (571)
T 2ad6_A 376 TNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK 455 (571)
T ss_dssp EEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC
T ss_pred eEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC
Confidence 2357888877777654 24789999999998
Q ss_pred eEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 749 SMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 749 ~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.+-...+...+....+...+.+|+.++.||.|++||
T Consensus 456 ~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 456 AKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp EEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred EEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEE
Confidence 874333333333333344567788889999999886
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.79 E-value=1.6e-07 Score=107.53 Aligned_cols=228 Identities=13% Similarity=0.115 Sum_probs=159.8
Q ss_pred CCCEEEEEeC-CCeEEEEECCCCceeeecCC-CCCCeEEEEE-c-cCCCEEEEEe------------------CCCeEEE
Q 047260 518 DGKLLASSGH-DRKVVLWNMDTLQTESTPED-HKSVVTDVRF-R-PNSSQLATAS------------------VDKSVRL 575 (784)
Q Consensus 518 dg~~Lasgs~-Dg~I~IWd~~t~~~~~~l~~-h~~~It~i~f-s-pdg~~Latgs------------------~Dg~I~I 575 (784)
||++|+++.. ++.|.+.|+++.++...+.- ....+..+++ . |+++++++++ .++.|.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 8888877665 55799999999998874432 2345888898 4 8999999885 3467999
Q ss_pred EcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCC-------------------------------------CeEE
Q 047260 576 WDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDND-------------------------------------NEIQ 618 (784)
Q Consensus 576 Wdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d-------------------------------------g~I~ 618 (784)
+|.++.+.......+- ....++++|++.++++++... +.|.
T Consensus 180 ID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 9999876444433322 356678999999888777543 1366
Q ss_pred EEeCCC--Cee-EEee--cCCeeEEEEecCCCEEEEEEC-CCcEEEEECCCCe------------EEEEEeCCCCCEEEE
Q 047260 619 YWSINP--FLC-THIT--KGGTAQVRFQPRIGQLLAAAS-DKVVSIFDIETDR------------QTHSLQGHAELVNYI 680 (784)
Q Consensus 619 iwDl~~--~~~-~~~~--~~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~------------~i~~l~~h~~~V~sl 680 (784)
+.|.++ ... +..+ .....++.++|||+++++++. +..|.++|+.+.+ .+..+. -......+
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~ 336 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHT 336 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceE
Confidence 666665 322 2222 245677899999999998886 7999999998653 333333 33456889
Q ss_pred EEcCCCCEEEEEe--CCeEEEEeCCC----------CceEEEeccCCCce-----EEEEEecCCCEEEEEECC--CeE--
Q 047260 681 CWDTNGDYLASVS--QNLVKVWSMAS----------GECIQELSSNGNQF-----HSCVFHPSYSTLLVVGGI--SSL-- 739 (784)
Q Consensus 681 ~~spdg~~Lasgs--dd~I~IwDl~t----------~~~i~~l~~~~~~I-----~sl~fspdg~~L~s~s~d--g~I-- 739 (784)
+|+++| ++++.. ++.|.+||+.+ ...+.++..|-.+- ..+.++|||++|++...- .++
T Consensus 337 aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~ 415 (595)
T 1fwx_A 337 AFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLN 415 (595)
T ss_dssp EECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCC
T ss_pred EECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccccc
Confidence 999999 666555 55999999977 56777777664332 122457999999998763 234
Q ss_pred ---------EEEECCCCce
Q 047260 740 ---------ELWNMAENKS 749 (784)
Q Consensus 740 ---------~Iwdl~~~~~ 749 (784)
.++|+..++.
T Consensus 416 ~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 416 VGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp CCSSCCEEEEEEECSSSSC
T ss_pred CCCCCCCcceEEEcCCCcE
Confidence 8899966553
No 247
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=1.1e-05 Score=97.23 Aligned_cols=270 Identities=10% Similarity=0.005 Sum_probs=176.5
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecC--------------CCCCCeEEEEEccCCCEEEEEeCCCe
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPE--------------DHKSVVTDVRFRPNSSQLATASVDKS 572 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~--------------~h~~~It~i~fspdg~~Latgs~Dg~ 572 (784)
...|.++...++|. |..|+..+-|.++|..+........ -....|.++...+++. |..|+.++-
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~G 334 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGG 334 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSC
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCe
Confidence 46799999988886 4456664568999987654322111 1345799999988775 667777777
Q ss_pred EEEEcCCCCcceeeec--------cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe------ecCCeeEE
Q 047260 573 VRLWDAANPNFCSQAY--------TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI------TKGGTAQV 638 (784)
Q Consensus 573 I~IWdl~~~~~~~~~~--------~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~------~~~~v~~v 638 (784)
|..|+........... .-....|.++...+++. +..|+.++-|..||..+...... ....|.++
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC--EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC--EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 9999887654221111 11235689998887765 34456566788898875433321 12456677
Q ss_pred EEecCCCEEEEEECCCcEEEEECCCCeEEEEEe--CCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccC--
Q 047260 639 RFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQ--GHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSN-- 714 (784)
Q Consensus 639 ~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~--~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~-- 714 (784)
...+++ .|.+++.++-|..+|..+++...... .....|.++..+++|.+.++.. +.|.+||..+++........
T Consensus 413 ~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 413 LKDSEG-NLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp EECTTS-CEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTS
T ss_pred EECCCC-CEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCccc
Confidence 766654 56778877789999988775433221 1346799999988887666554 77999998877654333222
Q ss_pred ---CCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEecc----cCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 715 ---GNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAA----HENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 715 ---~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~----h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
...|.++...+++. |.+++.++.|..||..+++...+.. ....|.++...+++.+.++. .+|.|..||
T Consensus 491 ~~~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d 565 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGR-FWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPS 565 (781)
T ss_dssp SCSCSCEEEEEECTTCC-EEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESC
T ss_pred ccccceeEEEEEcCCCC-EEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEEC
Confidence 35788898888886 5666665558889988776554432 24568999988888766654 466546654
No 248
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.78 E-value=1.1e-06 Score=90.90 Aligned_cols=191 Identities=14% Similarity=0.143 Sum_probs=137.7
Q ss_pred eeeecCCCCCC--eEEEEEccCCCEEEEEeCCC--eEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCe
Q 047260 541 TESTPEDHKSV--VTDVRFRPNSSQLATASVDK--SVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNE 616 (784)
Q Consensus 541 ~~~~l~~h~~~--It~i~fspdg~~Latgs~Dg--~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~ 616 (784)
.+.++ .|... ...+.|+ ++.++.+.+.+| .|+++|+++++........ ......-..+++..+++....++.
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG--KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC--TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC--CccceeEEEEeCCEEEEEEeeCCE
Confidence 44555 34433 4788898 676667777766 8999999998844433222 233332233345667777778999
Q ss_pred EEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCC--C---CCEEEEEEcCCCCEEEE
Q 047260 617 IQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGH--A---ELVNYICWDTNGDYLAS 691 (784)
Q Consensus 617 I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h--~---~~V~sl~~spdg~~Las 691 (784)
+.+||..+.+.+..+........+.+++..|+.+..++.|.++|..+.+.+..+... . ..++.+.|. +|++++.
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan 187 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFAN 187 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEE
Confidence 999999999988877754454556678888888877889999999999888887642 1 345567776 6765555
Q ss_pred Ee-CCeEEEEeCCCCceEEEeccC------------CCceEEEEEecCCCEEEEEECC
Q 047260 692 VS-QNLVKVWSMASGECIQELSSN------------GNQFHSCVFHPSYSTLLVVGGI 736 (784)
Q Consensus 692 gs-dd~I~IwDl~t~~~i~~l~~~------------~~~I~sl~fspdg~~L~s~s~d 736 (784)
.- ++.|.+.|..+++.+..+... ....+.++|+|+++.|++.+..
T Consensus 188 ~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 188 VWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp ETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 53 459999999999999888642 2356899999999988888875
No 249
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.74 E-value=1.4e-05 Score=84.77 Aligned_cols=234 Identities=9% Similarity=0.023 Sum_probs=145.6
Q ss_pred ceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCC-C-eE
Q 047260 496 TFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVD-K-SV 573 (784)
Q Consensus 496 ~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~D-g-~I 573 (784)
....+..+... .....++|+++++++++...++.|..||.+.. ....+ .....+..+++.++++++++.... + .|
T Consensus 21 ~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 21 PAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPV 97 (306)
T ss_dssp CEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceE
Confidence 34455555433 56889999999997777667899999998753 33333 233568899999999866655432 2 46
Q ss_pred EEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe--eEEe--------e-c--CCeeEEEE
Q 047260 574 RLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL--CTHI--------T-K--GGTAQVRF 640 (784)
Q Consensus 574 ~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~--~~~~--------~-~--~~v~~v~f 640 (784)
..+|..+++...............++..+. ..++++...++.|+++|..... .... . . .....+
T Consensus 98 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp EEEECTTSCEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred EEEcCCCCeEEEEEeCCCccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--
Confidence 667766655321111112223344554443 3355555468899999987542 2110 0 0 123344
Q ss_pred ecCCCEEEEEEC-CCcEEEEECCC-CeE--EEEEeCCCCCEEEEEEcCCCCEEEEEeC-CeEEEEeCCCCceEE--Eecc
Q 047260 641 QPRIGQLLAAAS-DKVVSIFDIET-DRQ--THSLQGHAELVNYICWDTNGDYLASVSQ-NLVKVWSMASGECIQ--ELSS 713 (784)
Q Consensus 641 sp~~~~Ll~~s~-Dg~I~IwDl~t-~~~--i~~l~~h~~~V~sl~~spdg~~Lasgsd-d~I~IwDl~t~~~i~--~l~~ 713 (784)
+++++.|+++.. .+.|.+||+.. ++. ...+.. ......++++++|+++++... +.|.++|.. ++... .+..
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~ 252 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ 252 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGG
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccc
Confidence 888888877776 68999999874 321 111211 123456889999987666554 489999975 65532 3444
Q ss_pred CCCceEEEEEe---cCCCEEEEEECCC
Q 047260 714 NGNQFHSCVFH---PSYSTLLVVGGIS 737 (784)
Q Consensus 714 ~~~~I~sl~fs---pdg~~L~s~s~dg 737 (784)
......+|+|. |++..|++++..+
T Consensus 253 ~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 253 GVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ccCCceEEEEecccCCCCEEEEECCCC
Confidence 44568999998 8888888777653
No 250
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.73 E-value=2.9e-06 Score=98.90 Aligned_cols=262 Identities=8% Similarity=0.059 Sum_probs=163.9
Q ss_pred CCEEEEEeC-CCeEEEEEC-CCCceeeecCCCCCC-----------eEEEEEccCCCE----EEEEeCCCeEEEEcCCCC
Q 047260 519 GKLLASSGH-DRKVVLWNM-DTLQTESTPEDHKSV-----------VTDVRFRPNSSQ----LATASVDKSVRLWDAANP 581 (784)
Q Consensus 519 g~~Lasgs~-Dg~I~IWd~-~t~~~~~~l~~h~~~-----------It~i~fspdg~~----Latgs~Dg~I~IWdl~~~ 581 (784)
+..|++++. ++.|..+|. .+++.+..+...... ...+++.|.+.. |++++.|+.|..+|.+++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 446666777 888999999 899988777533211 123455443434 888889999999999998
Q ss_pred cceeeeccCC-C--CCeE-EEEEcCCCCcEEEEEe------CCCeEEEEeCCCCeeEEeecCC--e--------------
Q 047260 582 NFCSQAYTGH-S--SPIM-SLDFHPKKTDLFCFCD------NDNEIQYWSINPFLCTHITKGG--T-------------- 635 (784)
Q Consensus 582 ~~~~~~~~~h-~--~~V~-sl~~sp~~~~ll~sgs------~dg~I~iwDl~~~~~~~~~~~~--v-------------- 635 (784)
+.+-..-... . ..+. ...+. + . .++++. .++.|+.+|.++++.+..+... .
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~-g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-K-D-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-T-T-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEEE-C-C-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 8543322111 0 0111 11111 2 2 344443 3799999999998877554421 1
Q ss_pred -------------------------eEEEEecCCCEEEEEECC----------------CcEEEEECCCCeEEEEEeCCC
Q 047260 636 -------------------------AQVRFQPRIGQLLAAASD----------------KVVSIFDIETDRQTHSLQGHA 674 (784)
Q Consensus 636 -------------------------~~v~fsp~~~~Ll~~s~D----------------g~I~IwDl~t~~~i~~l~~h~ 674 (784)
..+++.+..+.++++..+ +.|..+|.++++.+..+....
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 134677788888888765 389999999999988876422
Q ss_pred C----------CEEEEEEc-CCC---CEEEEEeC-CeEEEEeCCCCceEEEeccCC-------------Cce--------
Q 047260 675 E----------LVNYICWD-TNG---DYLASVSQ-NLVKVWSMASGECIQELSSNG-------------NQF-------- 718 (784)
Q Consensus 675 ~----------~V~sl~~s-pdg---~~Lasgsd-d~I~IwDl~t~~~i~~l~~~~-------------~~I-------- 718 (784)
. ++. +... .+| ..++.++. +.++++|.++|+.+....... .++
T Consensus 299 ~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 377 (599)
T 1w6s_A 299 HDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTR 377 (599)
T ss_dssp TCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCC
T ss_pred CccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCC
Confidence 1 121 2222 567 45665654 499999999999887664221 111
Q ss_pred ------------------EEEEEecCCCEEEEEE---------------------------------------CCCeEEE
Q 047260 719 ------------------HSCVFHPSYSTLLVVG---------------------------------------GISSLEL 741 (784)
Q Consensus 719 ------------------~sl~fspdg~~L~s~s---------------------------------------~dg~I~I 741 (784)
..++++|+...+++.. ..|.|..
T Consensus 378 ~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A 457 (599)
T 1w6s_A 378 MDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKA 457 (599)
T ss_dssp TTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEE
T ss_pred CCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEE
Confidence 2356777666555431 3478999
Q ss_pred EECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 742 WNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 742 wdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
||+.+++.+-...+..++..-.....+.+|+.++.||.|+.||
T Consensus 458 ~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D 500 (599)
T 1w6s_A 458 YNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARD 500 (599)
T ss_dssp ECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred EECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEE
Confidence 9999998873332222222212233467888899999998876
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.72 E-value=1.1e-06 Score=90.83 Aligned_cols=188 Identities=13% Similarity=0.133 Sum_probs=136.9
Q ss_pred eeeecCCCC--CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEE--EEEcCCCCcEEEEEeCCCe
Q 047260 541 TESTPEDHK--SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMS--LDFHPKKTDLFCFCDNDNE 616 (784)
Q Consensus 541 ~~~~l~~h~--~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~s--l~~sp~~~~ll~sgs~dg~ 616 (784)
.+.++ .|. .....+.|+ ++.++++.+.+|.|+++|+++++..... .. ..... +++ ++..+++....++.
T Consensus 45 Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~--~~~FgeGit~--~g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 45 IIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL--GNIFAEGLAS--DGERLYQLTWTEGL 117 (268)
T ss_dssp EEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC--TTCCEEEEEE--CSSCEEEEESSSCE
T ss_pred EEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC--CCcceeEEEE--eCCEEEEEEccCCE
Confidence 34444 344 334678887 4566777788899999999998855444 32 23333 554 45668888888999
Q ss_pred EEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCC-----CCEEEEEEcCCCCEEEE
Q 047260 617 IQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHA-----ELVNYICWDTNGDYLAS 691 (784)
Q Consensus 617 I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~-----~~V~sl~~spdg~~Las 691 (784)
+.+||..+.+.+..+........+.+++..|+++..++.|.++|..+.+.+..+.... ..++.+.|. +|++++.
T Consensus 118 v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan 196 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYAN 196 (268)
T ss_dssp EEEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EEEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEE
Confidence 9999999999888777444334455678888888889999999999999888876421 245677876 7765555
Q ss_pred Ee-CCeEEEEeCCCCceEEEeccC-------------CCceEEEEEecCCCEEEEEECC
Q 047260 692 VS-QNLVKVWSMASGECIQELSSN-------------GNQFHSCVFHPSYSTLLVVGGI 736 (784)
Q Consensus 692 gs-dd~I~IwDl~t~~~i~~l~~~-------------~~~I~sl~fspdg~~L~s~s~d 736 (784)
.. .+.|.+.|..+++.+..+... ....+.++|+|+++.|++.+..
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred ECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 53 459999999999998887532 2356899999998888777754
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.72 E-value=1.3e-06 Score=103.51 Aligned_cols=253 Identities=9% Similarity=0.096 Sum_probs=158.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCCC----CCeEE-EEEccCCCEEEEEeC------CCeEEEEcCCCCcceeee
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDHK----SVVTD-VRFRPNSSQLATASV------DKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~----~~It~-i~fspdg~~Latgs~------Dg~I~IWdl~~~~~~~~~ 587 (784)
+..|++++.|+.|..+|..+++.+..+.... ..+.+ ..+. ++ .+++++. +|.|..+|.++++..-..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 4578888899999999999999987765421 11111 1111 34 4555543 589999999998743322
Q ss_pred cc--CCC----------------------------CCeEEEEEcCCCCcEEEEEeCCC-------------------eEE
Q 047260 588 YT--GHS----------------------------SPIMSLDFHPKKTDLFCFCDNDN-------------------EIQ 618 (784)
Q Consensus 588 ~~--~h~----------------------------~~V~sl~~sp~~~~ll~sgs~dg-------------------~I~ 618 (784)
.. +.. .....+++.++.. +++.+..++ .|.
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 11 000 1112467777765 555565554 499
Q ss_pred EEeCCCCeeEEeecC------------CeeEEEEecCCC---EEEEEECCCcEEEEECCCCeEEEEEeCCCC--------
Q 047260 619 YWSINPFLCTHITKG------------GTAQVRFQPRIG---QLLAAASDKVVSIFDIETDRQTHSLQGHAE-------- 675 (784)
Q Consensus 619 iwDl~~~~~~~~~~~------------~v~~v~fsp~~~---~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~-------- 675 (784)
.+|.++++.+..+.. +.....+..+++ .+++++.+|.|+++|.++++.+..+.....
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 999999888766542 112222334554 577888899999999999998854432110
Q ss_pred ----CE------------------------EEEEEcCCCCEEEEEe----------------------------------
Q 047260 676 ----LV------------------------NYICWDTNGDYLASVS---------------------------------- 693 (784)
Q Consensus 676 ----~V------------------------~sl~~spdg~~Lasgs---------------------------------- 693 (784)
++ ..++++|+..++++..
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 00 1156777766655421
Q ss_pred ---CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEE-ecccCCc-eEEEEEeCCC
Q 047260 694 ---QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMT-IAAHENI-ISALAQSPVT 768 (784)
Q Consensus 694 ---dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~-~~~h~~~-V~slafspdg 768 (784)
++.|..||+.+++.+.++.... ......+...+..+++++.|+.|++||..+++.+. +....+. -.-+.+..+|
T Consensus 434 ~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G 512 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAG 512 (668)
T ss_dssp GGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred CCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECC
Confidence 1479999999999988876543 33334555577789999999999999999999883 3222211 1223344566
Q ss_pred C-EEEEEE
Q 047260 769 G-MVASAS 775 (784)
Q Consensus 769 ~-~LaSgs 775 (784)
+ +++.++
T Consensus 513 ~~yva~~~ 520 (668)
T 1kv9_A 513 RQYVAIMA 520 (668)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 6 444443
No 253
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.71 E-value=3.7e-06 Score=87.60 Aligned_cols=201 Identities=8% Similarity=0.043 Sum_probs=137.2
Q ss_pred cceeEEeEeecCCCc--eEEEEEcCCCCEEEEEeC--CCeEEEEECCCCceeeecCCCC-CCeEEEEEccCCCEEEEEe-
Q 047260 495 FTFCEVGCIRSRNSK--VTCCHFSSDGKLLASSGH--DRKVVLWNMDTLQTESTPEDHK-SVVTDVRFRPNSSQLATAS- 568 (784)
Q Consensus 495 ~~~~~i~~l~~H~~~--V~~l~fspdg~~Lasgs~--Dg~I~IWd~~t~~~~~~l~~h~-~~It~i~fspdg~~Latgs- 568 (784)
..+..+.++. |... ...+.|++|+.++++.+. ++.|.++|+.+++.+..+.-.. .....+++. ++.|+.+.
T Consensus 7 ~~~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~ 83 (266)
T 2iwa_A 7 YIVEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVW 83 (266)
T ss_dssp EEEEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEET
T ss_pred cCceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEe
Confidence 4555666664 5543 689999998755555443 5799999999999988864222 222345554 44555544
Q ss_pred CCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecC--------CeeEEEE
Q 047260 569 VDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKG--------GTAQVRF 640 (784)
Q Consensus 569 ~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~--------~v~~v~f 640 (784)
.++.|.++|..+.+. ...+......-.. +++++..++++. .++.|.++|..+.+.+....- ....+.|
T Consensus 84 ~~~~v~viD~~t~~v-~~~i~~g~~~g~g--lt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSN-IKNFTHQMKDGWG--LATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp TCSEEEEEETTTTEE-EEEEECCSSSCCE--EEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred cCCEEEEEECCCCcE-EEEEECCCCCeEE--EEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE
Confidence 578999999998764 3334321122233 455777777655 688999999998776665542 2456777
Q ss_pred ecCCCEEEEEEC-CCcEEEEECCCCeEEEEEeCC-------------CCCEEEEEEcCCCCEEEEEeCC--eEEEEeCCC
Q 047260 641 QPRIGQLLAAAS-DKVVSIFDIETDRQTHSLQGH-------------AELVNYICWDTNGDYLASVSQN--LVKVWSMAS 704 (784)
Q Consensus 641 sp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~h-------------~~~V~sl~~spdg~~Lasgsdd--~I~IwDl~t 704 (784)
. ++ .+++... ++.|.+.|..+++.+..+... ....+.|+|+|+++.|++++.. .|.+.++..
T Consensus 160 ~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 160 I-NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp E-TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred E-CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 7 54 6666664 799999999999998888632 1356899999999877776643 787777654
No 254
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.67 E-value=6.9e-07 Score=105.57 Aligned_cols=264 Identities=12% Similarity=0.091 Sum_probs=154.8
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------eEEEEECCCCceee--ec-CCCCCCeEEEEEccCCCEEEEEeC-CCeEEE
Q 047260 512 CCHFSS-DGKLLASSGHDR-----------KVVLWNMDTLQTES--TP-EDHKSVVTDVRFRPNSSQLATASV-DKSVRL 575 (784)
Q Consensus 512 ~l~fsp-dg~~Lasgs~Dg-----------~I~IWd~~t~~~~~--~l-~~h~~~It~i~fspdg~~Latgs~-Dg~I~I 575 (784)
++++.+ ++++++.|+.+. .+.+||..+.+... .+ ..+.....++++..+++++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556677 888888887543 58899988765322 22 223444556788889999999984 468999
Q ss_pred EcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEe-CC-----CeEEEEeCCCCeeEEeec-------CCeeEEEEec
Q 047260 576 WDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCD-ND-----NEIQYWSINPFLCTHITK-------GGTAQVRFQP 642 (784)
Q Consensus 576 Wdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs-~d-----g~I~iwDl~~~~~~~~~~-------~~v~~v~fsp 642 (784)
||..+.......-......-.++++.+++. +++.|+ .+ ..+.+||..+........ .......+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 999876532211111111123445556666 666666 34 568999998765444311 0000011223
Q ss_pred CCCEEEEEECC---------CcEEEEECCCCeEEEEEeCCC---------CCEEEEEEcC-CCCEEEEEeC---------
Q 047260 643 RIGQLLAAASD---------KVVSIFDIETDRQTHSLQGHA---------ELVNYICWDT-NGDYLASVSQ--------- 694 (784)
Q Consensus 643 ~~~~Ll~~s~D---------g~I~IwDl~t~~~i~~l~~h~---------~~V~sl~~sp-dg~~Lasgsd--------- 694 (784)
++..++.++.+ ..+..||..+.........+. ..-.++.|.. ++++++.|+.
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 34444555443 456788888765443322111 1234455543 6777777652
Q ss_pred C---eEEEEeCCCCceEEEe--ccCCC-ceEEEEEecCCCEEEEEECC-----------CeEEEEECCCCceEEecc---
Q 047260 695 N---LVKVWSMASGECIQEL--SSNGN-QFHSCVFHPSYSTLLVVGGI-----------SSLELWNMAENKSMTIAA--- 754 (784)
Q Consensus 695 d---~I~IwDl~t~~~i~~l--~~~~~-~I~sl~fspdg~~L~s~s~d-----------g~I~Iwdl~~~~~~~~~~--- 754 (784)
+ .|.+||..+....... ..+.. .-.++++.|+++.+++++.+ ..+.+||..+++...+..
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~ 508 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI 508 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCC
Confidence 1 5788888876654433 11222 23455777899988888754 468999998876543321
Q ss_pred cCCceEEEEEeCCCCEEEEEEC
Q 047260 755 HENIISALAQSPVTGMVASASH 776 (784)
Q Consensus 755 h~~~V~slafspdg~~LaSgs~ 776 (784)
......+..+.+++++++.|+.
T Consensus 509 ~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 509 VRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCTTEEEEECTTSCEEEEECC
T ss_pred ccccccHhhcCCCcEEEecCCC
Confidence 1222334556789999999885
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.66 E-value=5.4e-06 Score=84.87 Aligned_cols=192 Identities=15% Similarity=0.127 Sum_probs=136.3
Q ss_pred ceeeecCCCC--CCeEEEEEccCCCEEEEEeCC--CeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCC
Q 047260 540 QTESTPEDHK--SVVTDVRFRPNSSQLATASVD--KSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDN 615 (784)
Q Consensus 540 ~~~~~l~~h~--~~It~i~fspdg~~Latgs~D--g~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg 615 (784)
+.+.++ .|. .....+.|+. +.++.+.+.+ ..|+++|+.+++.....-......-..+++ .+..++.....++
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEEeeCC
Confidence 344555 454 3466899986 5555665654 489999999988443332221111233444 3566788788899
Q ss_pred eEEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCC-----CCEEEEEEcCCCCEEE
Q 047260 616 EIQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHA-----ELVNYICWDTNGDYLA 690 (784)
Q Consensus 616 ~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~-----~~V~sl~~spdg~~La 690 (784)
.+.+||..+.+.+..+........+.+++..|+++..++.|.++|..+.+.+..+.... ..++.+.|. +|++++
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lya 164 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLA 164 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEE
Confidence 99999999999888877444445556788888888889999999999998888876422 355667775 666555
Q ss_pred EEe-CCeEEEEeCCCCceEEEeccC-------------CCceEEEEEecCCCEEEEEECC
Q 047260 691 SVS-QNLVKVWSMASGECIQELSSN-------------GNQFHSCVFHPSYSTLLVVGGI 736 (784)
Q Consensus 691 sgs-dd~I~IwDl~t~~~i~~l~~~-------------~~~I~sl~fspdg~~L~s~s~d 736 (784)
..- .+.|.+.|..+++.+..+... ....+.++++|+++.|++.+..
T Consensus 165 nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 553 559999999999999887622 2356899999998888888764
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.65 E-value=5.9e-06 Score=88.14 Aligned_cols=229 Identities=10% Similarity=0.043 Sum_probs=141.2
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeecc------------------CCCCCeEEEEEcCCCCcEEEEEe
Q 047260 551 VVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYT------------------GHSSPIMSLDFHPKKTDLFCFCD 612 (784)
Q Consensus 551 ~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~------------------~h~~~V~sl~~sp~~~~ll~sgs 612 (784)
...+++|.+++++++++..++.|..||..+......... .....+..+++.+++..+++ ++
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v-~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI-VD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-EE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-EE
Confidence 456788999998888888899999999876542211100 00135788999973333444 44
Q ss_pred CCCeEEEEeCCCCeeEEee---c----CCeeEEEEec-CCCEEEEEEC-----------------CCcEEEEECCCCeEE
Q 047260 613 NDNEIQYWSINPFLCTHIT---K----GGTAQVRFQP-RIGQLLAAAS-----------------DKVVSIFDIETDRQT 667 (784)
Q Consensus 613 ~dg~I~iwDl~~~~~~~~~---~----~~v~~v~fsp-~~~~Ll~~s~-----------------Dg~I~IwDl~t~~~i 667 (784)
..+.|..+|..+....... . .....+++.+ ++..+++... ++.|..||..+++..
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 4556888887754322211 1 2357789999 7765554322 367899998777643
Q ss_pred EEEeCCCCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCCCc--eEEEeccCCCceEEEEEecCCCEEEEEEC--------
Q 047260 668 HSLQGHAELVNYICWDTNGDYLASVS--QNLVKVWSMASGE--CIQELSSNGNQFHSCVFHPSYSTLLVVGG-------- 735 (784)
Q Consensus 668 ~~l~~h~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t~~--~i~~l~~~~~~I~sl~fspdg~~L~s~s~-------- 735 (784)
..... ......|+|++++++|+++. .+.|.+|++.... ....+..... ...+++.++|.++++...
T Consensus 179 ~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 179 LLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp EEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred EeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccC
Confidence 33221 22345789999999776664 3499999987521 1122211223 788999999986666544
Q ss_pred --CCeEEEEECCCCceE-Eeccc----CCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 736 --ISSLELWNMAENKSM-TIAAH----ENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 736 --dg~I~Iwdl~~~~~~-~~~~h----~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
.+.|..+|.. ++.+ .+... ...++++++. ++.++++...++.|.+++
T Consensus 257 ~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp CEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEEE
T ss_pred CCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEEe
Confidence 4678888875 4444 33322 2346777763 555555555667777653
No 257
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=3.2e-05 Score=93.05 Aligned_cols=268 Identities=10% Similarity=0.054 Sum_probs=171.6
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCC-------CCCCeEEEEEccCCCEEEEEeCCCeEEEEcCC
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPED-------HKSVVTDVRFRPNSSQLATASVDKSVRLWDAA 579 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~-------h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~ 579 (784)
...|.++...++|.+.+ |+.+ -|.+||..+.+....... ....|.+|...+++. |..|+..+-|.++|..
T Consensus 210 ~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 210 GNDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQ 286 (781)
T ss_dssp CSSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETT
T ss_pred CCceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCC
Confidence 35699999988887555 4545 599999876654332211 245699999887775 5566665568888887
Q ss_pred CCcceeeec-------------cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe------------ecCC
Q 047260 580 NPNFCSQAY-------------TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI------------TKGG 634 (784)
Q Consensus 580 ~~~~~~~~~-------------~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~------------~~~~ 634 (784)
+........ .-....|.++....++. +-.|..++-|..++......... ....
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 364 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN--IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKV 364 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC--EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSC
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC--EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcc
Confidence 654211110 11345789999888775 44566677788888875433222 1134
Q ss_pred eeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEE---eCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEe
Q 047260 635 TAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSL---QGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQEL 711 (784)
Q Consensus 635 v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l---~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l 711 (784)
|.++...+++ .|.+|+.++-|.+||..++...... ......|.+++.+++|.+.+....+.|.++|..+++.....
T Consensus 365 v~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 443 (781)
T 3v9f_A 365 VSSVCDDGQG-KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIE 443 (781)
T ss_dssp EEEEEECTTS-CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECC
T ss_pred eEEEEEcCCC-CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEec
Confidence 6777776664 5777787778999998765432211 12346799999988888777544458999998877543322
Q ss_pred c--cCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEecc-c-----CCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 712 S--SNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAA-H-----ENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 712 ~--~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~-h-----~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
. .....|.++...+++. |.+++. +.|.+||..+++...+.. . ...|.+++..+++.+.+....+| |..|
T Consensus 444 ~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~ 520 (781)
T 3v9f_A 444 LEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIY 520 (781)
T ss_dssp STTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEE
T ss_pred cCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEE
Confidence 1 2346788888887775 666666 569999988776543322 1 36799999998887666443344 4444
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.62 E-value=4.7e-05 Score=82.57 Aligned_cols=237 Identities=8% Similarity=0.011 Sum_probs=153.2
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEE-eCCCeEEEEcCCCCcce
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATA-SVDKSVRLWDAANPNFC 584 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latg-s~Dg~I~IWdl~~~~~~ 584 (784)
+.+..+|.+..++. +|+.+. ...|+..++........+. ....+..++|++....|+.+ ...+.|..+++.... .
T Consensus 32 ~~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~ 107 (349)
T 3v64_C 32 RPDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-V 107 (349)
T ss_dssp CTTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred CCCCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCC-c
Confidence 34556677766644 444443 4458888887655544443 33458899999865555544 457889999988654 2
Q ss_pred eeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC-C-CcEEEE
Q 047260 585 SQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS-D-KVVSIF 659 (784)
Q Consensus 585 ~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~-D-g~I~Iw 659 (784)
.............+++.+.+..++++-...+.|.+.+++......... .....++++|.++.|+.+.. . +.|..+
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 222222234467889988777788887778899999998644333332 45678999998888877765 4 788888
Q ss_pred ECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEE-CC
Q 047260 660 DIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVG-GI 736 (784)
Q Consensus 660 Dl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s-~d 736 (784)
++........+...-...+.|++++++..|+.+.. +.|..+|+........+.........+++. .+ .|+.+. ..
T Consensus 188 ~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~-~ly~td~~~ 265 (349)
T 3v64_C 188 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYWTDWHT 265 (349)
T ss_dssp ETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TT-EEEEEETTT
T ss_pred eCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CC-EEEEecCCC
Confidence 88754322222223445789999987777766663 389999987543333333334456777773 33 454444 45
Q ss_pred CeEEEEECCCCc
Q 047260 737 SSLELWNMAENK 748 (784)
Q Consensus 737 g~I~Iwdl~~~~ 748 (784)
+.|..++..+++
T Consensus 266 ~~V~~~~~~~G~ 277 (349)
T 3v64_C 266 KSINSANKFTGK 277 (349)
T ss_dssp TEEEEEETTTCC
T ss_pred CeEEEEEccCCC
Confidence 788888855554
No 259
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.61 E-value=5.1e-06 Score=85.78 Aligned_cols=191 Identities=12% Similarity=0.131 Sum_probs=129.7
Q ss_pred cceeEEeEeecCCCc--eEEEEEcCCCCEEEEEeCCC--eEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEe-C
Q 047260 495 FTFCEVGCIRSRNSK--VTCCHFSSDGKLLASSGHDR--KVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATAS-V 569 (784)
Q Consensus 495 ~~~~~i~~l~~H~~~--V~~l~fspdg~~Lasgs~Dg--~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs-~ 569 (784)
..+..+.++ .|... ...+.|+ ++.++.+.+.+| .|+++|+++++.+..+.-.. ........++++.|+... .
T Consensus 29 ~~~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 29 YDYQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESS
T ss_pred cceEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEee
Confidence 445556666 45544 4788998 677777777766 89999999999988875432 333322233455555554 4
Q ss_pred CCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec--------CCeeEEEEe
Q 047260 570 DKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK--------GGTAQVRFQ 641 (784)
Q Consensus 570 Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~--------~~v~~v~fs 641 (784)
++.+.+||..+.+. +..+... ..-..++ +++..++++. .++.|.++|..+.+.+.... ..++.+.|.
T Consensus 106 ~~~v~v~D~~t~~~-~~ti~~~-~eG~glt--~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 106 NGLGFVWNIRNLRQ-VRSFNYD-GEGWGLT--HNDQYLIMSD-GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp SSEEEEEETTTCCE-EEEEECS-SCCCCEE--ECSSCEEECC-SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred CCEEEEEECccCcE-EEEEECC-CCceEEe--cCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 88999999998774 4433321 2223444 4566566654 47889999999877765543 223446665
Q ss_pred cCCCEEEEEEC-CCcEEEEECCCCeEEEEEeCC------------CCCEEEEEEcCCCCEEEEEeCC
Q 047260 642 PRIGQLLAAAS-DKVVSIFDIETDRQTHSLQGH------------AELVNYICWDTNGDYLASVSQN 695 (784)
Q Consensus 642 p~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~h------------~~~V~sl~~spdg~~Lasgsdd 695 (784)
++ .|++... ++.|.+.|.++++.+..+... ....+.|+|+|+++.|++.+..
T Consensus 181 -~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 181 -DG-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp -TT-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred -CC-EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 44 5666664 789999999999998888642 2356899999998888887765
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.59 E-value=4.1e-06 Score=97.29 Aligned_cols=252 Identities=10% Similarity=-0.009 Sum_probs=153.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCCC----CCeEE-EEEccCCCEEEEEeC------CCeEEEEcCCCCcceeee
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDHK----SVVTD-VRFRPNSSQLATASV------DKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~----~~It~-i~fspdg~~Latgs~------Dg~I~IWdl~~~~~~~~~ 587 (784)
+..|++++.|+.|..+|..+++.+....... ..+.+ .... ++ .+++++. ++.|..+|.++++..-+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 4577888889999999999999887654221 01211 1111 34 5566554 799999999988743322
Q ss_pred ccCCCC-------------------------------------CeEEEEEcCCCCcEEEEEeC-----------C----C
Q 047260 588 YTGHSS-------------------------------------PIMSLDFHPKKTDLFCFCDN-----------D----N 615 (784)
Q Consensus 588 ~~~h~~-------------------------------------~V~sl~~sp~~~~ll~sgs~-----------d----g 615 (784)
...... ....+++.++...+++..+. | +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 111000 00134566655534433221 1 3
Q ss_pred eEEEEeCCCCeeEEeecCC---------eeE-E--EEecCCC---EEEEEECCCcEEEEECCCCeEEEEEeCCC------
Q 047260 616 EIQYWSINPFLCTHITKGG---------TAQ-V--RFQPRIG---QLLAAASDKVVSIFDIETDRQTHSLQGHA------ 674 (784)
Q Consensus 616 ~I~iwDl~~~~~~~~~~~~---------v~~-v--~fsp~~~---~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~------ 674 (784)
.|..+|.++++.+..+... +.. + ....+++ .+++++.+|.|+++|.++++.+..+....
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 6999999988877655311 111 1 2224563 46667779999999999999887765321
Q ss_pred -------CCE--------------------------EEEEEcCCCCEEEEEe----------------------------
Q 047260 675 -------ELV--------------------------NYICWDTNGDYLASVS---------------------------- 693 (784)
Q Consensus 675 -------~~V--------------------------~sl~~spdg~~Lasgs---------------------------- 693 (784)
.++ ..++++|+..+|++..
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 111 1356778777666543
Q ss_pred ----------CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEecccCCce--EE
Q 047260 694 ----------QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTIAAHENII--SA 761 (784)
Q Consensus 694 ----------dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h~~~V--~s 761 (784)
.+.|..||+.+++.+.++.... .+....+...+..+++++.|+.|++||..+++.+........+ .-
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 511 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSP 511 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeee
Confidence 2389999999999888876432 2233333445667888999999999999999988332211111 22
Q ss_pred EEEeCCCCEEEE
Q 047260 762 LAQSPVTGMVAS 773 (784)
Q Consensus 762 lafspdg~~LaS 773 (784)
+.+..+++.++.
T Consensus 512 ~~~~~~G~~yv~ 523 (571)
T 2ad6_A 512 MTYSFKGKQYIG 523 (571)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCEEEEE
Confidence 335567764443
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.59 E-value=4.7e-05 Score=83.82 Aligned_cols=237 Identities=8% Similarity=-0.001 Sum_probs=152.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEE-EEeCCCeEEEEcCCCCcceee
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLA-TASVDKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~La-tgs~Dg~I~IWdl~~~~~~~~ 586 (784)
+..+|.+..++ .+|+.+. ...|+.+++........+. ....+..++|++.+..|+ +-...+.|..++++... ...
T Consensus 77 d~~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~~~ 152 (386)
T 3v65_B 77 DRRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-VEE 152 (386)
T ss_dssp TSSCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-EEE
T ss_pred CCCeECCcccc-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC-cEE
Confidence 34456665553 3454443 4568999988665544443 345688999998555555 44567889999988654 222
Q ss_pred eccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC-C-CcEEEEEC
Q 047260 587 AYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS-D-KVVSIFDI 661 (784)
Q Consensus 587 ~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~-D-g~I~IwDl 661 (784)
.+.........+++.+.+..++++-...+.|.+.+++......... .....++++|.++.|+.+.. . +.|..+++
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 2222233456788888777788877778899999987544333332 45678999998888887765 3 68888888
Q ss_pred CCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeE
Q 047260 662 ETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSL 739 (784)
Q Consensus 662 ~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I 739 (784)
........+.......+.|+|+|++..|+.+.. +.|..+|+........+.........+++. .+..+++-...+.|
T Consensus 233 dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V 311 (386)
T 3v65_B 233 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSI 311 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeE
Confidence 754333333334456789999987777766653 389999987544333343334456778883 33334444455789
Q ss_pred EEEECCCCce
Q 047260 740 ELWNMAENKS 749 (784)
Q Consensus 740 ~Iwdl~~~~~ 749 (784)
..++..+++.
T Consensus 312 ~~~~~~~G~~ 321 (386)
T 3v65_B 312 NSANKFTGKN 321 (386)
T ss_dssp EEEETTTCCS
T ss_pred EEEECCCCcc
Confidence 9998655543
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.58 E-value=3.1e-05 Score=82.00 Aligned_cols=219 Identities=10% Similarity=-0.018 Sum_probs=136.6
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeC-CC-eEEEEeCCCCee
Q 047260 550 SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDN-DN-EIQYWSINPFLC 627 (784)
Q Consensus 550 ~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~-dg-~I~iwDl~~~~~ 627 (784)
.....++|+++++++++-..++.|..||.+... ...+ .....+..+++.+++. ++++... ++ .|..+|..+.+.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~--~~~~-~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ--QIHA-TVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE--EEEE-ECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce--EEEE-eCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeE
Confidence 457789999999877776678999999987532 2222 2235688999999987 5554433 22 477777666554
Q ss_pred EEeec----CCeeEEEEecCCCEEEEEE-CCCcEEEEECCCCeE-EEEEe---------CCCCCEEEEEEcCCCCEEEEE
Q 047260 628 THITK----GGTAQVRFQPRIGQLLAAA-SDKVVSIFDIETDRQ-THSLQ---------GHAELVNYICWDTNGDYLASV 692 (784)
Q Consensus 628 ~~~~~----~~v~~v~fsp~~~~Ll~~s-~Dg~I~IwDl~t~~~-i~~l~---------~h~~~V~sl~~spdg~~Lasg 692 (784)
..... .....+++.+ +..++++. .++.|+++|...++. +.... ......+.| ++++.+|+.+
T Consensus 108 ~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 33221 1123344444 34555555 488999999876532 21111 111234555 7888877776
Q ss_pred eC--CeEEEEeCCC-Cce--EEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEe---cccCCceEEEEE
Q 047260 693 SQ--NLVKVWSMAS-GEC--IQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTI---AAHENIISALAQ 764 (784)
Q Consensus 693 sd--d~I~IwDl~t-~~~--i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~---~~h~~~V~slaf 764 (784)
.. +.|.+||+.. ++. ...+.. ......++++++|.++++....+.|.+||.. ++...+ ......+++++|
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~ 262 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAF 262 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEE
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEE
Confidence 63 3999999874 321 112211 1345678999999876666667899999976 544322 223356899999
Q ss_pred e---CCCCEEEEEECC
Q 047260 765 S---PVTGMVASASHD 777 (784)
Q Consensus 765 s---pdg~~LaSgs~D 777 (784)
. ++++.|+.++..
T Consensus 263 ~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 263 GQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CCSTTTTTEEEEEECT
T ss_pred ecccCCCCEEEEECCC
Confidence 9 888777766543
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.58 E-value=2.2e-05 Score=91.32 Aligned_cols=263 Identities=10% Similarity=0.033 Sum_probs=159.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCCCCCe---------EEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeecc
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVV---------TDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYT 589 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~I---------t~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~ 589 (784)
+..|++++.++.|..+|..+++.+..+....... ..+++ .+..|++++.|+.|..+|.++++.+-..-.
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 3345555654459999999999887775432210 11222 355788888999999999999885433221
Q ss_pred CC-C--CCeE-E-EEEcC--CCCcEEEEEe------CCCeEEEEeCCCCeeEEeecCC---e------------------
Q 047260 590 GH-S--SPIM-S-LDFHP--KKTDLFCFCD------NDNEIQYWSINPFLCTHITKGG---T------------------ 635 (784)
Q Consensus 590 ~h-~--~~V~-s-l~~sp--~~~~ll~sgs------~dg~I~iwDl~~~~~~~~~~~~---v------------------ 635 (784)
.. . ..+. . +.... ++..+++++. .++.|+.+|.++++.+...... +
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 11 0 0111 1 11111 1222444443 3789999999987766543311 0
Q ss_pred -----------------------eEEEEecCCCEEEEEEC--------------------C----CcEEEEECCCCeEEE
Q 047260 636 -----------------------AQVRFQPRIGQLLAAAS--------------------D----KVVSIFDIETDRQTH 668 (784)
Q Consensus 636 -----------------------~~v~fsp~~~~Ll~~s~--------------------D----g~I~IwDl~t~~~i~ 668 (784)
..+++.|..+.++++.. | +.|..+|.++++.+.
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 12456777788887773 2 589999999999988
Q ss_pred EEeC--CC--------CCEEEEEEc-CCCC---EEEEEeC-CeEEEEeCCCCceEEEeccCC-------------Cc---
Q 047260 669 SLQG--HA--------ELVNYICWD-TNGD---YLASVSQ-NLVKVWSMASGECIQELSSNG-------------NQ--- 717 (784)
Q Consensus 669 ~l~~--h~--------~~V~sl~~s-pdg~---~Lasgsd-d~I~IwDl~t~~~i~~l~~~~-------------~~--- 717 (784)
.+.. |. .++. +... .+|+ +++.++. +.++++|..+|+.+..+.... .+
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~ 384 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVER 384 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEEC
T ss_pred EEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEc
Confidence 8753 32 1221 2222 4674 6666664 499999999999887665431 00
Q ss_pred -----------------------------eEEEEEecCCCEEEEEE---------------------------------C
Q 047260 718 -----------------------------FHSCVFHPSYSTLLVVG---------------------------------G 735 (784)
Q Consensus 718 -----------------------------I~sl~fspdg~~L~s~s---------------------------------~ 735 (784)
-..++++|+...+++.. .
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~ 464 (582)
T 1flg_A 385 EGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDH 464 (582)
T ss_dssp TTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSC
T ss_pred cccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCC
Confidence 01345666655555543 2
Q ss_pred CCeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 736 ISSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 736 dg~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+|.|..||+.+++.+-...+..++..-.....+.+++.++.||.|+.||
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D 513 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFD 513 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEE
Confidence 5789999999998873222222222222223467888899999999886
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.54 E-value=2.6e-05 Score=90.82 Aligned_cols=249 Identities=12% Similarity=0.024 Sum_probs=150.3
Q ss_pred EEEEeCCCeEEEEECCCCceeeecCCCC----CCeEE-EEEccCCCEEEEEe------CCCeEEEEcCCCCcceeeeccC
Q 047260 522 LASSGHDRKVVLWNMDTLQTESTPEDHK----SVVTD-VRFRPNSSQLATAS------VDKSVRLWDAANPNFCSQAYTG 590 (784)
Q Consensus 522 Lasgs~Dg~I~IWd~~t~~~~~~l~~h~----~~It~-i~fspdg~~Latgs------~Dg~I~IWdl~~~~~~~~~~~~ 590 (784)
|++++.|+.|..+|..+++.+....... ..+++ ..+. ++ .+++++ .++.|+.+|.++++..-+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7778889999999999999887654322 02221 1111 44 455554 3899999999998743322211
Q ss_pred CCC------------------------------------Ce-EEEEEcCCCCcEEEEEeCC----------------CeE
Q 047260 591 HSS------------------------------------PI-MSLDFHPKKTDLFCFCDND----------------NEI 617 (784)
Q Consensus 591 h~~------------------------------------~V-~sl~~sp~~~~ll~sgs~d----------------g~I 617 (784)
... .+ ..+++.++.. +++.+..+ +.|
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g-~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTN-LIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCC-EEEEeCCCCccccCcccCCCccccceE
Confidence 100 00 1344555555 44444433 479
Q ss_pred EEEeCCCCeeEEeecCC---------e-eEEEEe---cCC---CEEEEEECCCcEEEEECCCCeEEEEEeCCC-------
Q 047260 618 QYWSINPFLCTHITKGG---------T-AQVRFQ---PRI---GQLLAAASDKVVSIFDIETDRQTHSLQGHA------- 674 (784)
Q Consensus 618 ~iwDl~~~~~~~~~~~~---------v-~~v~fs---p~~---~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~------- 674 (784)
..+|.++++.+..+... . ..+.+. .++ ..++.++.+|.|+++|.++++.+.......
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 99999998887655421 0 112222 456 346667789999999999999887665211
Q ss_pred ------CCE--------------------------EEEEEcCCCCEEEEE------------------------------
Q 047260 675 ------ELV--------------------------NYICWDTNGDYLASV------------------------------ 692 (784)
Q Consensus 675 ------~~V--------------------------~sl~~spdg~~Lasg------------------------------ 692 (784)
.++ ..++++|+..++++.
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 111 134566665555442
Q ss_pred ----------eCCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-EecccCC-ceE
Q 047260 693 ----------SQNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-TIAAHEN-IIS 760 (784)
Q Consensus 693 ----------sdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-~~~~h~~-~V~ 760 (784)
..+.|..||+.+++.+.+..... ++..-.+...+..+++++.|+.|+.||.++++.+ .+....+ ...
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~ 519 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF-AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGY 519 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCCC-CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEec
Confidence 12478999999999887775321 2222223335667888999999999999999988 3322211 112
Q ss_pred EEEEeCCCC-EEEEE
Q 047260 761 ALAQSPVTG-MVASA 774 (784)
Q Consensus 761 slafspdg~-~LaSg 774 (784)
-+.+..+|+ ||++.
T Consensus 520 P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 520 PMTYTHKGTQYVAIY 534 (599)
T ss_dssp CEEEEETTEEEEEEE
T ss_pred cEEEEeCCEEEEEEE
Confidence 245556776 44443
No 265
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.53 E-value=0.00028 Score=75.61 Aligned_cols=276 Identities=9% Similarity=-0.018 Sum_probs=153.9
Q ss_pred CcceeEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecC----CCCCCeEEEEEccCCCEEEEEeC
Q 047260 494 GFTFCEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPE----DHKSVVTDVRFRPNSSQLATASV 569 (784)
Q Consensus 494 ~~~~~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~----~h~~~It~i~fspdg~~Latgs~ 569 (784)
+.++..+.. .....+.+|.|.+++..++ ++.+|.| +...+.++.-..+. .....+.+|.|.+ +. ++.++.
T Consensus 24 g~~W~~~~~--~~~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~ 97 (327)
T 2xbg_A 24 YNPWEAIQL--PTTATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGE 97 (327)
T ss_dssp SCCEEEEEC--SCSSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEE
T ss_pred CCCceEeec--CCCCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEEC
Confidence 444544432 2345799999988777777 4567765 33444343222221 2345689999976 43 444556
Q ss_pred CCeEEEEcCCCCcceeeecc--CCCCCeEEEEEcCCCCcEEEEEeCCCeEEE-EeCC-CCeeEE-eecCCeeEEEEecCC
Q 047260 570 DKSVRLWDAANPNFCSQAYT--GHSSPIMSLDFHPKKTDLFCFCDNDNEIQY-WSIN-PFLCTH-ITKGGTAQVRFQPRI 644 (784)
Q Consensus 570 Dg~I~IWdl~~~~~~~~~~~--~h~~~V~sl~~sp~~~~ll~sgs~dg~I~i-wDl~-~~~~~~-~~~~~v~~v~fsp~~ 644 (784)
++.|.. ..+.++.-..... .+...+..|.+.+++. +++++. ++.|.. .|-- +...+. .....+..+.+.+++
T Consensus 98 ~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~-~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~ 174 (327)
T 2xbg_A 98 PPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGS-AEMITN-VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSG 174 (327)
T ss_dssp TTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTE-EEEEET-TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTS
T ss_pred CCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCC-EEEEeC-CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCC
Confidence 675543 2222232111111 2345577888776554 555444 554433 3321 222221 123457788898887
Q ss_pred CEEEEEECCCcEEEE-EC--CCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEecc----CCCc
Q 047260 645 GQLLAAASDKVVSIF-DI--ETDRQTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSS----NGNQ 717 (784)
Q Consensus 645 ~~Ll~~s~Dg~I~Iw-Dl--~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~----~~~~ 717 (784)
..++ .+.++.|..- |- .+-+.+. ......+..+.+.+++.+++++.++.+++.+...++.-..+.. ....
T Consensus 175 ~~~~-~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~ 251 (327)
T 2xbg_A 175 EYVA-VSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVG 251 (327)
T ss_dssp CEEE-EETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSC
T ss_pred cEEE-EECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcc
Confidence 6554 4455555443 32 2223331 2345678899999999988777777777764332332222221 2235
Q ss_pred eEEEEEecCCCEEEEEECCCeEEEEECCCCceEE-ec---ccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 718 FHSCVFHPSYSTLLVVGGISSLELWNMAENKSMT-IA---AHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 718 I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~-~~---~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+.++.+.+++. +++++.++.| ++..+.++.-. +. .+...+.++.|.+++ .++.++.+|.|.-++
T Consensus 252 ~~~v~~~~~~~-~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 252 FLDLAYRTPNE-VWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp EEEEEESSSSC-EEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred eEEEEecCCCE-EEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence 78889988766 4555567766 45556555443 22 234568889887544 566677889887653
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.50 E-value=6.2e-06 Score=98.98 Aligned_cols=237 Identities=11% Similarity=0.043 Sum_probs=135.3
Q ss_pred ceEEEEEc-CCCCEEEEEeC-CC----eEEEEECCCC-ceeeecCCCCCCeEEEEEccCCCEEEEEeCC-----CeEEEE
Q 047260 509 KVTCCHFS-SDGKLLASSGH-DR----KVVLWNMDTL-QTESTPEDHKSVVTDVRFRPNSSQLATASVD-----KSVRLW 576 (784)
Q Consensus 509 ~V~~l~fs-pdg~~Lasgs~-Dg----~I~IWd~~t~-~~~~~l~~h~~~It~i~fspdg~~Latgs~D-----g~I~IW 576 (784)
.+...+|| |||++||.+.. +| .|+++|+.++ +.+... -......++|+||++.|+....| ..|.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 67889999 99998886543 22 5999999988 632110 01123468999999988887765 258888
Q ss_pred cCCCCcce-eeecc-CCCCCeEEEEEcCCCCcEEEEEeC--CCeEEEEeCCCC--ee--EEeec---CCeeEEEEecCCC
Q 047260 577 DAANPNFC-SQAYT-GHSSPIMSLDFHPKKTDLFCFCDN--DNEIQYWSINPF--LC--THITK---GGTAQVRFQPRIG 645 (784)
Q Consensus 577 dl~~~~~~-~~~~~-~h~~~V~sl~~sp~~~~ll~sgs~--dg~I~iwDl~~~--~~--~~~~~---~~v~~v~fsp~~~ 645 (784)
++.++... ...+. ........+.|+|++..++++... ...|+++|+.+. .. ..... .....+.|+ .++
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~-~g~ 331 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH-GTS 331 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE-TTT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee-eCC
Confidence 88775421 12222 223456788999999988877653 346888888764 22 22222 223333333 266
Q ss_pred EEEEEEC-C----CcEEEEECCCCeEEEE-EeCCCC--CEEEEEEcCCCCEE-EEEe-CC--eEEEEeC-------CCCc
Q 047260 646 QLLAAAS-D----KVVSIFDIETDRQTHS-LQGHAE--LVNYICWDTNGDYL-ASVS-QN--LVKVWSM-------ASGE 706 (784)
Q Consensus 646 ~Ll~~s~-D----g~I~IwDl~t~~~i~~-l~~h~~--~V~sl~~spdg~~L-asgs-dd--~I~IwDl-------~t~~ 706 (784)
.|+..+. + ..|.++|+.+...... +..+.. .+..+.+. +..| ++.. ++ .|.++|+ .+++
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~ 409 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGT 409 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEECCTTTSCCCTTT
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEecccccccccCCc
Confidence 6666554 3 3677778765222122 222333 34555554 4444 4444 44 6778886 3444
Q ss_pred eEEEeccCC-CceEEEEE----ecCCCE-EEEEECC---CeEEEEECCCCceE
Q 047260 707 CIQELSSNG-NQFHSCVF----HPSYST-LLVVGGI---SSLELWNMAENKSM 750 (784)
Q Consensus 707 ~i~~l~~~~-~~I~sl~f----spdg~~-L~s~s~d---g~I~Iwdl~~~~~~ 750 (784)
.+..+.... ..+..+.+ ++++.. +++.+.. ..|+.+|+.+++..
T Consensus 410 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~ 462 (751)
T 2xe4_A 410 GLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRT 462 (751)
T ss_dssp CCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEE
T ss_pred cceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEE
Confidence 134443222 12233322 345543 4444433 46888888776644
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.50 E-value=0.00042 Score=73.82 Aligned_cols=223 Identities=8% Similarity=-0.042 Sum_probs=142.6
Q ss_pred EEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEE-eCCCeEEEEcCCCC---cceeeeccCCCCCeE
Q 047260 521 LLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATA-SVDKSVRLWDAANP---NFCSQAYTGHSSPIM 596 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latg-s~Dg~I~IWdl~~~---~~~~~~~~~h~~~V~ 596 (784)
+|+.+. ...|+..|+.+......+. ....+..++|++.+..|+.+ ..++.|..+++... ......+...-....
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344443 3458999998776555543 34567899999866555544 45689999998751 212222222224567
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEECC--CcEEEEECCCCeEEEEEe
Q 047260 597 SLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAASD--KVVSIFDIETDRQTHSLQ 671 (784)
Q Consensus 597 sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~D--g~I~IwDl~t~~~i~~l~ 671 (784)
.+++.+.+..++++-...+.|.+++++......... .....++++|.++.|+.+... +.|..+++..........
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~ 160 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 160 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE
Confidence 889987777787777778999999998644332222 456789999988888877763 688888886433222222
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEec---cCCCceEEEEEecCCCEEEEEE-CCCeEEEEECC
Q 047260 672 GHAELVNYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELS---SNGNQFHSCVFHPSYSTLLVVG-GISSLELWNMA 745 (784)
Q Consensus 672 ~h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~---~~~~~I~sl~fspdg~~L~s~s-~dg~I~Iwdl~ 745 (784)
..-...+.|++++++..|+.+.. +.|..+|+.... ...+. ........+++.. + .|+.+. ..+.|..++..
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~~-~-~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE-D-KVFWTDIINEAIFSANRL 237 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEET-T-EEEEEETTTTEEEEEETT
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEEC-C-EEEEEECCCCeEEEEeCC
Confidence 33456789999998777766663 399999987432 22222 1223456777753 3 444444 45789999876
Q ss_pred CCc
Q 047260 746 ENK 748 (784)
Q Consensus 746 ~~~ 748 (784)
+++
T Consensus 238 ~g~ 240 (316)
T 1ijq_A 238 TGS 240 (316)
T ss_dssp TCC
T ss_pred CCc
Confidence 654
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.49 E-value=4.3e-05 Score=88.87 Aligned_cols=254 Identities=11% Similarity=0.022 Sum_probs=153.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeecCCCCC----CeE-EEEEcc---CCC-EEEEEe------CCCeEEEEcCCCCcc
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQTESTPEDHKS----VVT-DVRFRP---NSS-QLATAS------VDKSVRLWDAANPNF 583 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~----~It-~i~fsp---dg~-~Latgs------~Dg~I~IWdl~~~~~ 583 (784)
+..|++++.|+.|..+|.++++.+........ .+. ...... +++ .+++++ .++.|..+|.++++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45677788999999999999998877643221 111 111111 233 566654 378999999998874
Q ss_pred eeeeccCCCC-----------------------------------------CeEEEEEcCCCCcEEEEEe----------
Q 047260 584 CSQAYTGHSS-----------------------------------------PIMSLDFHPKKTDLFCFCD---------- 612 (784)
Q Consensus 584 ~~~~~~~h~~-----------------------------------------~V~sl~~sp~~~~ll~sgs---------- 612 (784)
.-.. ..... .-..+++.|+...+++..+
T Consensus 197 ~W~~-~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 197 IWMR-PFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEE-ESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred Eeec-CCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 3221 11000 0012455566554444332
Q ss_pred --C-------C----CeEEEEeCCCCeeEEeecCC---------e-eEEEEe---cCCC---EEEEEECCCcEEEEECCC
Q 047260 613 --N-------D----NEIQYWSINPFLCTHITKGG---------T-AQVRFQ---PRIG---QLLAAASDKVVSIFDIET 663 (784)
Q Consensus 613 --~-------d----g~I~iwDl~~~~~~~~~~~~---------v-~~v~fs---p~~~---~Ll~~s~Dg~I~IwDl~t 663 (784)
. | +.|..+|.++++.+..+... + ..+.+. .+++ .++.++.+|.|+++|.++
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 1 2 68999999998887665321 1 112222 4563 577788899999999999
Q ss_pred CeEEEEEeCCCC-------------CE--------------------------------EEEEEcCCCCEEEEEe-----
Q 047260 664 DRQTHSLQGHAE-------------LV--------------------------------NYICWDTNGDYLASVS----- 693 (784)
Q Consensus 664 ~~~i~~l~~h~~-------------~V--------------------------------~sl~~spdg~~Lasgs----- 693 (784)
++.+..+..... ++ ..++++|+..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 998877653320 00 1235566544444322
Q ss_pred -----------------------------CCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEEC
Q 047260 694 -----------------------------QNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNM 744 (784)
Q Consensus 694 -----------------------------dd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl 744 (784)
.+.|..||+.+++.+.++.... .+..-.....+..+++++.|+.|+.||.
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 2479999999999887776432 2222222334667888999999999999
Q ss_pred CCCceEEecccCCceE--EEEEeCCCC-EEEEE
Q 047260 745 AENKSMTIAAHENIIS--ALAQSPVTG-MVASA 774 (784)
Q Consensus 745 ~~~~~~~~~~h~~~V~--slafspdg~-~LaSg 774 (784)
++++.+-.......+. -+.|..+|+ ||++.
T Consensus 515 ~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 515 KSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 9999883332222222 256667776 44443
No 269
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.43 E-value=2e-05 Score=81.46 Aligned_cols=174 Identities=9% Similarity=0.053 Sum_probs=122.0
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee-cCCeeEEEEecCCCEEEEEEC-CCcEEEEECCCCeEEEEEeC
Q 047260 595 IMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT-KGGTAQVRFQPRIGQLLAAAS-DKVVSIFDIETDRQTHSLQG 672 (784)
Q Consensus 595 V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~-~~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~ 672 (784)
...+.|+ +..++++.+.+|.|+++|+.+++.+... .......-+.++++.|+.... ++.+.+||..+.+.+.++..
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 4678887 3568888888999999999987765544 333333334455666766654 89999999999999999875
Q ss_pred CCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCceEEEeccCC-----CceEEEEEecCCCEEEEEE-CCCeEEEEECC
Q 047260 673 HAELVNYICWDTNGDYLASVS-QNLVKVWSMASGECIQELSSNG-----NQFHSCVFHPSYSTLLVVG-GISSLELWNMA 745 (784)
Q Consensus 673 h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~~i~~l~~~~-----~~I~sl~fspdg~~L~s~s-~dg~I~Iwdl~ 745 (784)
.... ..++ +++..|+.+. ++.|.++|..+.+.+.++.... ..++.+.|. +|. |++.. .++.|.+.|..
T Consensus 135 ~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 135 SGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPA 209 (268)
T ss_dssp SSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTT
T ss_pred CCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCC
Confidence 3322 3344 4567666655 4599999999999888876422 234667777 664 55554 56799999999
Q ss_pred CCceEEecc--------------cCCceEEEEEeCCCCEEEEEE
Q 047260 746 ENKSMTIAA--------------HENIISALAQSPVTGMVASAS 775 (784)
Q Consensus 746 ~~~~~~~~~--------------h~~~V~slafspdg~~LaSgs 775 (784)
+++.+.... -....+.|+|+|+++.|++.+
T Consensus 210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 998872211 124678999999876555544
No 270
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.41 E-value=7.9e-05 Score=76.19 Aligned_cols=178 Identities=7% Similarity=0.012 Sum_probs=122.5
Q ss_pred CCeEEEEEcCCCCcEEEEEeCC--CeEEEEeCCCCeeEEeec--CCeeEEEEecCCCEEEEEEC-CCcEEEEECCCCeEE
Q 047260 593 SPIMSLDFHPKKTDLFCFCDND--NEIQYWSINPFLCTHITK--GGTAQVRFQPRIGQLLAAAS-DKVVSIFDIETDRQT 667 (784)
Q Consensus 593 ~~V~sl~~sp~~~~ll~sgs~d--g~I~iwDl~~~~~~~~~~--~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i 667 (784)
.-...+.|+. ..++.+.+.+ ..|+++|+.+++.+.... .......+...++.|+.... ++.+.+||..+.+.+
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3456889986 4577777765 489999999998887665 33333334445677777665 899999999999999
Q ss_pred EEEeCCCCCEEEEEEcCCCCEEEEE-eCCeEEEEeCCCCceEEEeccCC-----CceEEEEEecCCCEEEEEECCCeEEE
Q 047260 668 HSLQGHAELVNYICWDTNGDYLASV-SQNLVKVWSMASGECIQELSSNG-----NQFHSCVFHPSYSTLLVVGGISSLEL 741 (784)
Q Consensus 668 ~~l~~h~~~V~sl~~spdg~~Lasg-sdd~I~IwDl~t~~~i~~l~~~~-----~~I~sl~fspdg~~L~s~s~dg~I~I 741 (784)
.++...... ..++ +++..|+.+ +++.|.++|..+.+.+.++.... ..++.+.|. ++..++..-.+..|.+
T Consensus 99 ~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~v 174 (243)
T 3mbr_X 99 ARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIAR 174 (243)
T ss_dssp EEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEE
Confidence 998754332 3444 445544444 34599999999999888876432 345666666 5554434435679999
Q ss_pred EECCCCceEEecc--------------cCCceEEEEEeCCCCEEEEEEC
Q 047260 742 WNMAENKSMTIAA--------------HENIISALAQSPVTGMVASASH 776 (784)
Q Consensus 742 wdl~~~~~~~~~~--------------h~~~V~slafspdg~~LaSgs~ 776 (784)
.|..+++.+.... -....+.|+++|+++.|++.+.
T Consensus 175 IDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 175 IDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 9999999873211 1235789999998876666553
No 271
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.39 E-value=0.0002 Score=76.55 Aligned_cols=227 Identities=8% Similarity=-0.003 Sum_probs=142.1
Q ss_pred EEEEEeCCCeEEEEECCCCc-eeeecCCCCCCeEEEEEccCCCEE-EEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEE
Q 047260 521 LLASSGHDRKVVLWNMDTLQ-TESTPEDHKSVVTDVRFRPNSSQL-ATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSL 598 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~-~~~~l~~h~~~It~i~fspdg~~L-atgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl 598 (784)
+|+.+. ...|+.++++... ....+......+..++|++.+..| ++-...+.|..+++.............-.....+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 344333 4569999998653 111111122356789999854444 4545678899999876532122222223456788
Q ss_pred EEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC--CCcEEEEECCCCeEEEEEeCC
Q 047260 599 DFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS--DKVVSIFDIETDRQTHSLQGH 673 (784)
Q Consensus 599 ~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~--Dg~I~IwDl~t~~~i~~l~~h 673 (784)
++.+.+..++++-...+.|.+++++......... .....+++.|.++.|+.+.. .+.|..+++........+...
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~ 164 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 164 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC
Confidence 8888777788777778899999998643332222 45678999998888888774 578888888643322222333
Q ss_pred CCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCce
Q 047260 674 AELVNYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKS 749 (784)
Q Consensus 674 ~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~ 749 (784)
-..-+.|+|++++..|+.+.. +.|..+|+........+.........+++..+ ..+++-...+.|..++..+++.
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEEEETTTCCS
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEEEECCCCCc
Confidence 445689999997777766653 39999998654332223323445567777533 3334434457899999866653
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.39 E-value=0.00058 Score=72.72 Aligned_cols=216 Identities=11% Similarity=0.009 Sum_probs=138.7
Q ss_pred EEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC----CeeEEeec---CCe
Q 047260 563 QLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP----FLCTHITK---GGT 635 (784)
Q Consensus 563 ~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~----~~~~~~~~---~~v 635 (784)
+|+.+.. ..|+..|+..... ..... ....+..++|++.+..++++-..++.|..++++. ........ ...
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~-~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEY-TSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCC-EEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEECC-CeEEEEECCCcce-Eehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 4444443 5689999987653 22222 3456889999998877888877889999999876 22222222 345
Q ss_pred eEEEEecCCCEEEEEEC-CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe-C--CeEEEEeCCCCceEEEe
Q 047260 636 AQVRFQPRIGQLLAAAS-DKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS-Q--NLVKVWSMASGECIQEL 711 (784)
Q Consensus 636 ~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs-d--d~I~IwDl~t~~~i~~l 711 (784)
..+++.+.++.|+.+.. .+.|.++|+........+.........++++|.+..|+.+. . +.|..+++.. .....+
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~ 158 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSL 158 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEE
Confidence 78899887777776654 78999999876544333443445678999998666555444 2 4788888753 333333
Q ss_pred -ccCCCceEEEEEecCCCEEEEEECC-CeEEEEECCCCceEEecc---cCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 712 -SSNGNQFHSCVFHPSYSTLLVVGGI-SSLELWNMAENKSMTIAA---HENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 712 -~~~~~~I~sl~fspdg~~L~s~s~d-g~I~Iwdl~~~~~~~~~~---h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
...-.....+++++++..|+.+... +.|..+|+.......+.. .......|++.. +.++++-...+.|..+
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSA 234 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEE
Confidence 2334567899999988888777654 689999998654443322 234567788753 4444444445566554
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.37 E-value=0.00024 Score=76.90 Aligned_cols=214 Identities=7% Similarity=-0.042 Sum_probs=138.7
Q ss_pred CCceEEEEEcCCCCEEE-EEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEE-EEEeCCCeEEEEcCCCCcce
Q 047260 507 NSKVTCCHFSSDGKLLA-SSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQL-ATASVDKSVRLWDAANPNFC 584 (784)
Q Consensus 507 ~~~V~~l~fspdg~~La-sgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~L-atgs~Dg~I~IWdl~~~~~~ 584 (784)
...+..++|++.+..|+ +-...+.|..++++.......+.........+++.+.+..| ++-...+.|.+.+++... .
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~ 150 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-R 150 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-e
Confidence 34588999998655555 44467889999998765444443333456788998755444 555567889999987543 2
Q ss_pred eeeccCCCCCeEEEEEcCCCCcEEEEEeCC-CeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC-CCcEEEE
Q 047260 585 SQAYTGHSSPIMSLDFHPKKTDLFCFCDND-NEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS-DKVVSIF 659 (784)
Q Consensus 585 ~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d-g~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~-Dg~I~Iw 659 (784)
.......-.....|+++|.+..++++-... +.|..++++......... .....++++++++.|+.+.. .+.|..+
T Consensus 151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 222333345678999999887777776666 889999987543333322 34578999998888888876 5789999
Q ss_pred ECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCceEEEeccCCCceEEEE
Q 047260 660 DIETDRQTHSLQGHAELVNYICWDTNGDYLASVS-QNLVKVWSMASGECIQELSSNGNQFHSCV 722 (784)
Q Consensus 660 Dl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~~i~~l~~~~~~I~sl~ 722 (784)
|+........+.........+++. .+.++++-. .+.|..++..+++.+..+.........++
T Consensus 231 ~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~ 293 (349)
T 3v64_C 231 NLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIH 293 (349)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEE
T ss_pred eCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEE
Confidence 987543333333334456777773 343333333 33888888777766666654333333333
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.37 E-value=0.00094 Score=73.72 Aligned_cols=226 Identities=8% Similarity=-0.041 Sum_probs=147.1
Q ss_pred EEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEE-eCCCeEEEEcCCCCc---ceeeeccCCCCCeE
Q 047260 521 LLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATA-SVDKSVRLWDAANPN---FCSQAYTGHSSPIM 596 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latg-s~Dg~I~IWdl~~~~---~~~~~~~~h~~~V~ 596 (784)
+|+.+. ...|+..+++.......+ .....+..|+|++.+..|+.+ ...+.|+.+++.... ..............
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 455444 467999999876554444 345678899999866555555 456889999887521 12222333345678
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC--CCcEEEEECCCCeEEEEEe
Q 047260 597 SLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS--DKVVSIFDIETDRQTHSLQ 671 (784)
Q Consensus 597 sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~--Dg~I~IwDl~t~~~i~~l~ 671 (784)
.|++.+.+..++++-...+.|.+.+++......... .....++++|.++.|+.+.. .+.|..+++........+.
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~ 242 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 242 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE
Confidence 899988777788887788999999998654433333 34678999998888887764 3789999987544333333
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEecc--CCCceEEEEEecCCCEEEEEE-CCCeEEEEECCC
Q 047260 672 GHAELVNYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSS--NGNQFHSCVFHPSYSTLLVVG-GISSLELWNMAE 746 (784)
Q Consensus 672 ~h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~--~~~~I~sl~fspdg~~L~s~s-~dg~I~Iwdl~~ 746 (784)
..-...+.|++++++..|+.+.. +.|..+|+........+.. .-.....+++. +..|+.+. ..+.|..+|..+
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSS
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCC
Confidence 34457789999988877777663 3899999865433222222 22344566663 33455444 456899998666
Q ss_pred CceE
Q 047260 747 NKSM 750 (784)
Q Consensus 747 ~~~~ 750 (784)
++.+
T Consensus 321 G~~~ 324 (400)
T 3p5b_L 321 GSDV 324 (400)
T ss_dssp CCCC
T ss_pred CCce
Confidence 6443
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.36 E-value=0.00017 Score=79.34 Aligned_cols=215 Identities=7% Similarity=-0.046 Sum_probs=139.8
Q ss_pred CCceEEEEEcCCCCEE-EEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEE-EEEeCCCeEEEEcCCCCcce
Q 047260 507 NSKVTCCHFSSDGKLL-ASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQL-ATASVDKSVRLWDAANPNFC 584 (784)
Q Consensus 507 ~~~V~~l~fspdg~~L-asgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~L-atgs~Dg~I~IWdl~~~~~~ 584 (784)
...+..++|++.+..| ++-...+.|..++++.......+.........+++.+.+..| ++-...+.|.+.+++... .
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~ 193 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-R 193 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-C
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-e
Confidence 4458899999855544 444567889999998765444443333456778888755444 555557789999987543 2
Q ss_pred eeeccCCCCCeEEEEEcCCCCcEEEEEeCC-CeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC-CCcEEEE
Q 047260 585 SQAYTGHSSPIMSLDFHPKKTDLFCFCDND-NEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS-DKVVSIF 659 (784)
Q Consensus 585 ~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d-g~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~-Dg~I~Iw 659 (784)
...+.........|++.|.+..++++-... +.|..++++......... .....++++++++.|+.+.. .+.|..+
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 223333345678999999888777776666 889999987543333322 34578999998888888876 5789999
Q ss_pred ECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC-CeEEEEeCCCCceEEEeccCCCceEEEEE
Q 047260 660 DIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ-NLVKVWSMASGECIQELSSNGNQFHSCVF 723 (784)
Q Consensus 660 Dl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd-d~I~IwDl~t~~~i~~l~~~~~~I~sl~f 723 (784)
|+........+.........|++. .+.++++... +.|..+|..+++.+..+.........+++
T Consensus 274 d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 274 NLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp CTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred eCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 987543333333344456777773 3444444333 38888887777766666544333344433
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.35 E-value=9.2e-05 Score=82.71 Aligned_cols=232 Identities=10% Similarity=0.101 Sum_probs=141.2
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCC-C----eEEEEcCCCCc
Q 047260 509 KVTCCHFSS-DGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVD-K----SVRLWDAANPN 582 (784)
Q Consensus 509 ~V~~l~fsp-dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~D-g----~I~IWdl~~~~ 582 (784)
....++|+| ++..|+++...+.|+.+|+++....... ........|+|++++++|+++... + .+.+++.. +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 467899998 4556666666588999999876654443 345668899999999977666542 1 23334432 22
Q ss_pred ce-eeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec----CCeeEEEEecCCCEEEEEEC-CCcE
Q 047260 583 FC-SQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK----GGTAQVRFQPRIGQLLAAAS-DKVV 656 (784)
Q Consensus 583 ~~-~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~----~~v~~v~fsp~~~~Ll~~s~-Dg~I 656 (784)
.. ...+. .......++++|++..++++-..++.|..++........... .....++|+|++++|+++.. .+.|
T Consensus 216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 11 11121 123457788999555577777778999999998765422221 23678999999997777665 6889
Q ss_pred EEEECCC--CeE--EEEEeCC---------------CCCEE-EEEEc--------CCCCEEEEEeCC-eEEEEeCCCCce
Q 047260 657 SIFDIET--DRQ--THSLQGH---------------AELVN-YICWD--------TNGDYLASVSQN-LVKVWSMASGEC 707 (784)
Q Consensus 657 ~IwDl~t--~~~--i~~l~~h---------------~~~V~-sl~~s--------pdg~~Lasgsdd-~I~IwDl~t~~~ 707 (784)
..++... ++. +..+.+. -..-. .++.. ++|.++++-..+ .|+.++ .++..
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence 9987653 222 2222211 01122 45553 345555554433 899888 45543
Q ss_pred EEEeccC------------------CCceEEEEEecCCCEEEEEEC-CCeEEEEECC
Q 047260 708 IQELSSN------------------GNQFHSCVFHPSYSTLLVVGG-ISSLELWNMA 745 (784)
Q Consensus 708 i~~l~~~------------------~~~I~sl~fspdg~~L~s~s~-dg~I~Iwdl~ 745 (784)
.... +. -.....+++++++..|+++.. ...|+.++++
T Consensus 374 ~~~~-g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 374 TTFA-GRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEE-ECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEE-eCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 3322 21 114678999985445555544 4578877754
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=8.5e-05 Score=82.98 Aligned_cols=230 Identities=11% Similarity=0.080 Sum_probs=136.9
Q ss_pred CCeEEEEEcc-CCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCC----eEEEEeCCC
Q 047260 550 SVVTDVRFRP-NSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDN----EIQYWSINP 624 (784)
Q Consensus 550 ~~It~i~fsp-dg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg----~I~iwDl~~ 624 (784)
.....|+|+| ++..|+++...+.|+.+|+.... .. .+.........|+|++++..++++...++ .+.+++...
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~-v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY-VS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE-EE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE-EE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 3557899998 45667776666889999998754 22 22334566889999999986777665333 344444332
Q ss_pred C-e--eEEeecCCeeEEEEecCCCEEEEEE-CCCcEEEEECCCCeEEEEEeC-CCCCEEEEEEcCCCCEEEEEeC--CeE
Q 047260 625 F-L--CTHITKGGTAQVRFQPRIGQLLAAA-SDKVVSIFDIETDRQTHSLQG-HAELVNYICWDTNGDYLASVSQ--NLV 697 (784)
Q Consensus 625 ~-~--~~~~~~~~v~~v~fsp~~~~Ll~~s-~Dg~I~IwDl~t~~~i~~l~~-h~~~V~sl~~spdg~~Lasgsd--d~I 697 (784)
. . ...........++++|+++.|+++. .++.|..||...+.....+.. .......++|+|+|++|+.+.. +.|
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 1 1 1111234567788999555566555 478999999987754322222 2234678999999996666653 388
Q ss_pred EEEeCCC--Cce--EEEeccC---------------CCceE-EEEEe--------cCCCEEEEEE-CCCeEEEEECCCCc
Q 047260 698 KVWSMAS--GEC--IQELSSN---------------GNQFH-SCVFH--------PSYSTLLVVG-GISSLELWNMAENK 748 (784)
Q Consensus 698 ~IwDl~t--~~~--i~~l~~~---------------~~~I~-sl~fs--------pdg~~L~s~s-~dg~I~Iwdl~~~~ 748 (784)
..++... +.. +..+.+. -.... .+++. +++. |+++. ..+.|+.++. ++.
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~~n~~I~~i~~-~G~ 372 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDRENHCIRILTP-QGR 372 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEGGGTEEEEECT-TSE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEECCCcEEEEECC-CCc
Confidence 8887653 221 2222211 01122 44443 2343 44444 4568988884 455
Q ss_pred eEEeccc---------C---------CceEEEEEeCCCCEEEEEE-CCCcEEEe
Q 047260 749 SMTIAAH---------E---------NIISALAQSPVTGMVASAS-HDSSVKLW 783 (784)
Q Consensus 749 ~~~~~~h---------~---------~~V~slafspdg~~LaSgs-~DG~V~IW 783 (784)
...+.+. . .....|++++++..|+.+. ...+|+.+
T Consensus 373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 4444322 1 2578999999644455444 45667654
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.28 E-value=0.00099 Score=73.53 Aligned_cols=217 Identities=10% Similarity=0.004 Sum_probs=142.2
Q ss_pred EEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC----eeEEeec---CCe
Q 047260 563 QLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF----LCTHITK---GGT 635 (784)
Q Consensus 563 ~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~----~~~~~~~---~~v 635 (784)
+|+.+. ...|+..++..... ... ......+..|+|++.+..++++-...+.|+.++++.. ....... ...
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~-~~~-~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEY-TSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSC-EEE-ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEec-cceeEEEccCCcce-eEe-ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 455444 46899999986542 222 2345678899999988878887777889999998752 1222222 456
Q ss_pred eEEEEecCCCEEEEEEC-CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe--C-CeEEEEeCCCCceEEEe
Q 047260 636 AQVRFQPRIGQLLAAAS-DKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS--Q-NLVKVWSMASGECIQEL 711 (784)
Q Consensus 636 ~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs--d-d~I~IwDl~t~~~i~~l 711 (784)
..+++.+.++.|+.+.. .+.|.++|++.......+.........|+++|.+.+|+... . ..|...++........+
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 78899987777777665 68999999986655444544455678999999766666554 2 37888888654433333
Q ss_pred ccCCCceEEEEEecCCCEEEEEECC-CeEEEEECCCCceEEecc---cCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 712 SSNGNQFHSCVFHPSYSTLLVVGGI-SSLELWNMAENKSMTIAA---HENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 712 ~~~~~~I~sl~fspdg~~L~s~s~d-g~I~Iwdl~~~~~~~~~~---h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
...-.....+++++++..|+.+... +.|..+|+.......+.. ......+|++.. +.++++-...+.|..+
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~~~V~~~ 316 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSA 316 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-TEEEEEESSSCSEEEE
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-CEEEEecCCCCeEEEE
Confidence 3334567899999988888887654 689999998765543332 234456777642 3344444445566544
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.28 E-value=0.00072 Score=69.79 Aligned_cols=200 Identities=9% Similarity=0.105 Sum_probs=136.9
Q ss_pred eEeecCCCceEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceeeecC-CCCCCeEEEEEccCCCEEEEEeCCCeEEEEcC
Q 047260 501 GCIRSRNSKVTCCHFSSDGK-LLASSGHDRKVVLWNMDTLQTESTPE-DHKSVVTDVRFRPNSSQLATASVDKSVRLWDA 578 (784)
Q Consensus 501 ~~l~~H~~~V~~l~fspdg~-~Lasgs~Dg~I~IWd~~t~~~~~~l~-~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl 578 (784)
+.+.+-.+.+..++|+|++. ++++...++.|...|.. ++.+..+. .-......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 45667777899999999766 55567788999999998 88777763 22356788999988877676656788999987
Q ss_pred CCCcc--eeeec------cCCCCCeEEEEEcCCCCcEEEEEeCCC-eEEEEeC--CC--CeeEEe-------ecCCeeEE
Q 047260 579 ANPNF--CSQAY------TGHSSPIMSLDFHPKKTDLFCFCDNDN-EIQYWSI--NP--FLCTHI-------TKGGTAQV 638 (784)
Q Consensus 579 ~~~~~--~~~~~------~~h~~~V~sl~~sp~~~~ll~sgs~dg-~I~iwDl--~~--~~~~~~-------~~~~v~~v 638 (784)
..... ..... .........|+|+|.+..++++...+. .|+.|+- .. ...... .......+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65442 11111 123455789999999887888776655 5666651 11 111111 11356889
Q ss_pred EEecCCCEEEEEEC-CCcEEEEECCCCeEEEEEeCCC---------CCEEEEEEcCCCCEEEEEeCCeEEEEeC
Q 047260 639 RFQPRIGQLLAAAS-DKVVSIFDIETDRQTHSLQGHA---------ELVNYICWDTNGDYLASVSQNLVKVWSM 702 (784)
Q Consensus 639 ~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~h~---------~~V~sl~~spdg~~Lasgsdd~I~IwDl 702 (784)
+++|..+++++.+. ++.|.++|.. ++.+..+.-.. ..-..|+|+++|++++++..+.++++.-
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 99999888887777 5788889976 44555443221 2568899999999777755557776653
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.25 E-value=0.00027 Score=79.03 Aligned_cols=233 Identities=11% Similarity=0.084 Sum_probs=139.9
Q ss_pred CceEEEEEcCC--CCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCC-----eEEEEcCCC
Q 047260 508 SKVTCCHFSSD--GKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDK-----SVRLWDAAN 580 (784)
Q Consensus 508 ~~V~~l~fspd--g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg-----~I~IWdl~~ 580 (784)
.....++|+|+ +..|+.+...+.|+.+|..++...... ........|+|+++++ |+.+...+ .+...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 34678999985 445555554488999999877765544 3456689999999999 55444321 233333322
Q ss_pred CcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee-EEeec----CCeeEEEEecCCCEEEEEEC-CC
Q 047260 581 PNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLC-THITK----GGTAQVRFQPRIGQLLAAAS-DK 654 (784)
Q Consensus 581 ~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~-~~~~~----~~v~~v~fsp~~~~Ll~~s~-Dg 654 (784)
.......+. .-.....++++|++..++++...++.|+.+|..+... ..... .....++|+|++++|+++.. .+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 111001111 2234567889995555777666788999999986544 22211 12246999999997777766 68
Q ss_pred cEEEEECC--CCeE--EEEEeCC---------------CCCEEEEEE---------cCCCCEEEEEeCC-eEEEEeCCCC
Q 047260 655 VVSIFDIE--TDRQ--THSLQGH---------------AELVNYICW---------DTNGDYLASVSQN-LVKVWSMASG 705 (784)
Q Consensus 655 ~I~IwDl~--t~~~--i~~l~~h---------------~~~V~sl~~---------spdg~~Lasgsdd-~I~IwDl~t~ 705 (784)
.|..+|.. ++.. ...+.+. -.....+++ .++|.++++-..+ .|+.++. ++
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 89998865 2321 1222221 123566888 6777766665554 8999985 55
Q ss_pred ceEEEeccCC------------------CceEEEEEecCCCEEEEEE-CCCeEEEEECC
Q 047260 706 ECIQELSSNG------------------NQFHSCVFHPSYSTLLVVG-GISSLELWNMA 745 (784)
Q Consensus 706 ~~i~~l~~~~------------------~~I~sl~fspdg~~L~s~s-~dg~I~Iwdl~ 745 (784)
. +.++.+.. .....++++|....|+++. ..+.|+.++++
T Consensus 375 ~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 375 R-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp E-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred C-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 4 33333221 2256788884333444444 44577777654
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.25 E-value=0.00055 Score=73.15 Aligned_cols=219 Identities=11% Similarity=0.004 Sum_probs=138.1
Q ss_pred EEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe---eEEe-ecCCeeEE
Q 047260 563 QLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL---CTHI-TKGGTAQV 638 (784)
Q Consensus 563 ~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~---~~~~-~~~~v~~v 638 (784)
+|+.+. ...|+.+|++...............+..++|++.+..++.+-...+.|..++++... .+.. --.....+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 344443 467999999875311111111223567899999877788877778999999987652 1111 11456678
Q ss_pred EEecCCCEEEEEEC-CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe---CCeEEEEeCCCCceEEEeccC
Q 047260 639 RFQPRIGQLLAAAS-DKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS---QNLVKVWSMASGECIQELSSN 714 (784)
Q Consensus 639 ~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs---dd~I~IwDl~t~~~i~~l~~~ 714 (784)
++.+.++.|+.+.. .+.|.++++........+.........++++|.+.+|+.+. ...|..+++........+...
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~ 164 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 164 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC
Confidence 99987777776665 68999999875433333334455678999998766665555 238888887643322222333
Q ss_pred CCceEEEEEecCCCEEEEEEC-CCeEEEEECCCCceEEec-ccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 715 GNQFHSCVFHPSYSTLLVVGG-ISSLELWNMAENKSMTIA-AHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 715 ~~~I~sl~fspdg~~L~s~s~-dg~I~Iwdl~~~~~~~~~-~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
-...+.+++++++..|+.+.. .+.|..+|+.......+. ........+++.. +.++++-...+.|..+
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILAC 234 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEE
Confidence 345689999998887877765 468999999865444332 2345567777753 3344443344555543
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.24 E-value=0.00029 Score=72.76 Aligned_cols=195 Identities=10% Similarity=0.071 Sum_probs=129.0
Q ss_pred eccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec----CCeeEEEEecCCCEEEEEECCCcEEEEECC
Q 047260 587 AYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK----GGTAQVRFQPRIGQLLAAASDKVVSIFDIE 662 (784)
Q Consensus 587 ~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~----~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~ 662 (784)
.+.+-...+..++|+|++..++++...++.|...|.. ++.+..+. .....|++.+++.++++.-.++.|.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4556667899999999988888889999999999998 66665543 356778888877654554457889999886
Q ss_pred CCeE---EEEEe------CCCCCEEEEEEcCCCCEEEEEeCC---eEEEEeC-CCCceEEEec-------cCCCceEEEE
Q 047260 663 TDRQ---THSLQ------GHAELVNYICWDTNGDYLASVSQN---LVKVWSM-ASGECIQELS-------SNGNQFHSCV 722 (784)
Q Consensus 663 t~~~---i~~l~------~h~~~V~sl~~spdg~~Lasgsdd---~I~IwDl-~t~~~i~~l~-------~~~~~I~sl~ 722 (784)
.... +.... ..+.....|+|+|.+..|+++.+. .|+.|+- .....+..+. ..-..+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5432 22222 133456899999998766666643 4555551 1111222221 1234578999
Q ss_pred EecCCCEEEEEECC-CeEEEEECCCCceE--Eecc-c------CCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 723 FHPSYSTLLVVGGI-SSLELWNMAENKSM--TIAA-H------ENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 723 fspdg~~L~s~s~d-g~I~Iwdl~~~~~~--~~~~-h------~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
++|....+++.+.. ..|.++|....... .+.. . -.....|+|.++|+++++ +.-+.+++|
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 99988777766665 57889997755222 2221 1 125689999999985555 666666554
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.22 E-value=0.001 Score=79.84 Aligned_cols=235 Identities=9% Similarity=-0.029 Sum_probs=149.8
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEE-EEEeCCCeEEEEcCCCCc---cee
Q 047260 510 VTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQL-ATASVDKSVRLWDAANPN---FCS 585 (784)
Q Consensus 510 V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~L-atgs~Dg~I~IWdl~~~~---~~~ 585 (784)
-+|.+..+. .+|+.+. ...|+..++........+ .....+..|+|.+....| ++-...+.|+.+++.... ...
T Consensus 387 ~~C~~~~~~-p~Ll~an-~~~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~ 463 (791)
T 3m0c_C 387 KACKAVGSI-AYLFFTN-RHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 463 (791)
T ss_dssp CCCEETTSC-CEEEEEC-BSSEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE
T ss_pred ceeeecccc-ccccccc-ccceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCccee
Confidence 344444332 2444433 456888888765544444 345667899999855555 454556789999887531 122
Q ss_pred eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC-C-CcEEEEE
Q 047260 586 QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS-D-KVVSIFD 660 (784)
Q Consensus 586 ~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~-D-g~I~IwD 660 (784)
..+.........|++.+.+..++++-...+.|.+.+++......... .....|++.|..++|+.+.. . +.|.+.+
T Consensus 464 ~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 464 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence 23332345577899998888788888888999999998654433332 35778999999888888775 2 7899999
Q ss_pred CCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEeccC--CCceEEEEEecCCCEEEEEEC-
Q 047260 661 IETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSSN--GNQFHSCVFHPSYSTLLVVGG- 735 (784)
Q Consensus 661 l~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~~--~~~I~sl~fspdg~~L~s~s~- 735 (784)
+........+...-.....|++++.+..|+.+.. +.|..+++........+... -.....|++. +.+|+.+..
T Consensus 544 ~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~ 621 (791)
T 3m0c_C 544 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDII 621 (791)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETT
T ss_pred cCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECC
Confidence 8755444444444467889999987777766653 38999998654443333322 1234456654 346666654
Q ss_pred CCeEEEEECCCCce
Q 047260 736 ISSLELWNMAENKS 749 (784)
Q Consensus 736 dg~I~Iwdl~~~~~ 749 (784)
.+.|...|..+++.
T Consensus 622 ~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 622 NEAIFSANRLTGSD 635 (791)
T ss_dssp TTEEEEEETTTCCC
T ss_pred CCEEEEEeCCCCcc
Confidence 46888888766644
No 284
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.16 E-value=5.9e-05 Score=90.43 Aligned_cols=188 Identities=12% Similarity=0.152 Sum_probs=118.4
Q ss_pred CeEEEEEc-CCCCcEEEEEeCCC----eEEEEeCCCC-eeEE-eecCCeeEEEEecCCCEEEEEECC-----CcEEEEEC
Q 047260 594 PIMSLDFH-PKKTDLFCFCDNDN----EIQYWSINPF-LCTH-ITKGGTAQVRFQPRIGQLLAAASD-----KVVSIFDI 661 (784)
Q Consensus 594 ~V~sl~~s-p~~~~ll~sgs~dg----~I~iwDl~~~-~~~~-~~~~~v~~v~fsp~~~~Ll~~s~D-----g~I~IwDl 661 (784)
.+....|+ ||+..++++.+.+| .|+++|+.++ +.+. .+......+.|+|+++.|+....+ ..|+++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 57789999 99998877776654 4999999887 5321 112223467899999988887765 36888888
Q ss_pred CCCe--EEEEEe-CCCCCEEEEEEcCCCCEEEEEe---CC-eEEEEeCCCCc-eE--EEec-cCCCceEEEEEecCCCEE
Q 047260 662 ETDR--QTHSLQ-GHAELVNYICWDTNGDYLASVS---QN-LVKVWSMASGE-CI--QELS-SNGNQFHSCVFHPSYSTL 730 (784)
Q Consensus 662 ~t~~--~i~~l~-~h~~~V~sl~~spdg~~Lasgs---dd-~I~IwDl~t~~-~i--~~l~-~~~~~I~sl~fspdg~~L 730 (784)
.++. ....+. ........+.|+|||++|+..+ .. .|.++|+.++. .. ..+. .......++.|+. +..|
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l 333 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHL 333 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEE
Confidence 7763 223333 2334567889999999887665 22 79999998762 22 3343 3334455555554 5555
Q ss_pred EEEEC-C----CeEEEEECCC-CceEE-ecccCC--ceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 731 LVVGG-I----SSLELWNMAE-NKSMT-IAAHEN--IISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 731 ~s~s~-d----g~I~Iwdl~~-~~~~~-~~~h~~--~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
+..+. + ..|.++|+.+ +.... +..|.. .+..+.+. .+.++++...||..+||
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEE
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEE
Confidence 55443 3 2677788775 23233 444443 45556555 23456666778876654
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.15 E-value=0.00041 Score=77.47 Aligned_cols=229 Identities=14% Similarity=0.137 Sum_probs=136.1
Q ss_pred CeEEEEEccC--CCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCC---C-eEEEEeCCC
Q 047260 551 VVTDVRFRPN--SSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDND---N-EIQYWSINP 624 (784)
Q Consensus 551 ~It~i~fspd--g~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d---g-~I~iwDl~~ 624 (784)
....|+|+|+ ...|+.+...+.|+.+|..++. . ..+.........|+|++++. ++++...+ . .+..++...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~-v-~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY-V-DIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTE-E-EEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCE-E-EEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 4578999984 4456666555889999997655 2 23333455689999999998 66655422 1 233333321
Q ss_pred C-e--eEEeecCCeeEEEEecCCCEEEEEE-CCCcEEEEECCCCeEEEEE-eC-CCCCEEEEEEcCCCCEEEEEeC--Ce
Q 047260 625 F-L--CTHITKGGTAQVRFQPRIGQLLAAA-SDKVVSIFDIETDRQTHSL-QG-HAELVNYICWDTNGDYLASVSQ--NL 696 (784)
Q Consensus 625 ~-~--~~~~~~~~v~~v~fsp~~~~Ll~~s-~Dg~I~IwDl~t~~~i~~l-~~-h~~~V~sl~~spdg~~Lasgsd--d~ 696 (784)
. . ...........++++|+.+.|+++. .++.|+.+|..++.....+ .. ....-..++|+|++++|+.+.. +.
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 1 1 1111224456688999555566555 4688999999877653322 21 2223357999999996666653 38
Q ss_pred EEEEeCC--CCce--EEEeccC---------------CCceEEEEE---------ecCCCEEEEEECCCeEEEEECCCCc
Q 047260 697 VKVWSMA--SGEC--IQELSSN---------------GNQFHSCVF---------HPSYSTLLVVGGISSLELWNMAENK 748 (784)
Q Consensus 697 I~IwDl~--t~~~--i~~l~~~---------------~~~I~sl~f---------spdg~~L~s~s~dg~I~Iwdl~~~~ 748 (784)
|+.+++. ++.. ...+.+. -.....+++ .+++..+++-...+.|+.++. ++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 9998865 3321 1222211 123466888 556654444445578999985 455
Q ss_pred eEEeccc------------------CCceEEEEEe-CCCCEEEEEECCCcEEEe
Q 047260 749 SMTIAAH------------------ENIISALAQS-PVTGMVASASHDSSVKLW 783 (784)
Q Consensus 749 ~~~~~~h------------------~~~V~slafs-pdg~~LaSgs~DG~V~IW 783 (784)
..++.+. -.....|+++ +++.++++=...++|+.+
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 4444321 1247889999 555555444456677764
No 286
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.09 E-value=0.00015 Score=85.39 Aligned_cols=223 Identities=7% Similarity=-0.011 Sum_probs=128.4
Q ss_pred EEEEcc-CCCEEEEEeCCC-----------eEEEEcCCCCcceeee-c-cCCCCCeEEEEEcCCCCcEEEEEe-CCCeEE
Q 047260 554 DVRFRP-NSSQLATASVDK-----------SVRLWDAANPNFCSQA-Y-TGHSSPIMSLDFHPKKTDLFCFCD-NDNEIQ 618 (784)
Q Consensus 554 ~i~fsp-dg~~Latgs~Dg-----------~I~IWdl~~~~~~~~~-~-~~h~~~V~sl~~sp~~~~ll~sgs-~dg~I~ 618 (784)
.+++.+ ++++++.|+.+. .+.+||..+.+..... . ..+.....++++..++. +++.|+ .+..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC-EEEeCCCCCCceE
Confidence 566777 888888887643 5889999886632211 1 12333444567777776 666665 556899
Q ss_pred EEeCCCCeeEEeec----CCeeEEEEecCCCEEEEEE-CC-----CcEEEEECCCCeEEEEE----eCCCCCEEEEEEcC
Q 047260 619 YWSINPFLCTHITK----GGTAQVRFQPRIGQLLAAA-SD-----KVVSIFDIETDRQTHSL----QGHAELVNYICWDT 684 (784)
Q Consensus 619 iwDl~~~~~~~~~~----~~v~~v~fsp~~~~Ll~~s-~D-----g~I~IwDl~t~~~i~~l----~~h~~~V~sl~~sp 684 (784)
+||..+........ ..-..+++.++++.+++|+ .+ ..+.+||..+.+-...- ......-....+..
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99998765443322 1123455667888888888 34 57999999887533220 00000000011123
Q ss_pred CCCEEEEE----------eCCeEEEEeCCCCceEEEeccCC---------CceEEEEEec-CCCEEEEEECCC-------
Q 047260 685 NGDYLASV----------SQNLVKVWSMASGECIQELSSNG---------NQFHSCVFHP-SYSTLLVVGGIS------- 737 (784)
Q Consensus 685 dg~~Lasg----------sdd~I~IwDl~t~~~i~~l~~~~---------~~I~sl~fsp-dg~~L~s~s~dg------- 737 (784)
++.+++.+ ..+.+..||..+........... ..-.++.|.. +++.+++|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 33333333 23478899998776443332221 1224445544 556666666432
Q ss_pred ----eEEEEECCCCceEEec---ccCCce-EEEEEeCCCCEEEEEECC
Q 047260 738 ----SLELWNMAENKSMTIA---AHENII-SALAQSPVTGMVASASHD 777 (784)
Q Consensus 738 ----~I~Iwdl~~~~~~~~~---~h~~~V-~slafspdg~~LaSgs~D 777 (784)
.|.+||..+.....+. .+..+. .+++..+++++++.|+.+
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcc
Confidence 6888898887665442 222222 345667899999999864
No 287
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.08 E-value=0.00081 Score=72.23 Aligned_cols=192 Identities=12% Similarity=0.199 Sum_probs=127.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccC----CC---EEEEEeC---CCeEEEEcCCCCcceeee
Q 047260 518 DGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPN----SS---QLATASV---DKSVRLWDAANPNFCSQA 587 (784)
Q Consensus 518 dg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspd----g~---~Latgs~---Dg~I~IWdl~~~~~~~~~ 587 (784)
...+++.....+-+.|||+ +++.+..+.. +.++.+..-|+ ++ ++++... +++|++|++......+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3445665667788999999 7888888753 56777777663 22 2333333 578999977421212322
Q ss_pred ccC------CC-CCeEEEEE--cCC-CCcEEEEEeCCCeEEEEeCC-------CCeeEEeec--CCeeEEEEecCCCEEE
Q 047260 588 YTG------HS-SPIMSLDF--HPK-KTDLFCFCDNDNEIQYWSIN-------PFLCTHITK--GGTAQVRFQPRIGQLL 648 (784)
Q Consensus 588 ~~~------h~-~~V~sl~~--sp~-~~~ll~sgs~dg~I~iwDl~-------~~~~~~~~~--~~v~~v~fsp~~~~Ll 648 (784)
+.. .. ..+..+|+ ++. +..++++...+|.+..|++. +.+.++.+. +.+..+.+.+....|+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEE
Confidence 211 11 55677777 664 44567778888999999883 234444443 6677888999999999
Q ss_pred EEECCCcEEEEECC-----CCeEEEEEe-CC-CCCEEEEEE--cCCCC-EEEEEe--CCeEEEEeCC-CCceEEEec
Q 047260 649 AAASDKVVSIFDIE-----TDRQTHSLQ-GH-AELVNYICW--DTNGD-YLASVS--QNLVKVWSMA-SGECIQELS 712 (784)
Q Consensus 649 ~~s~Dg~I~IwDl~-----t~~~i~~l~-~h-~~~V~sl~~--spdg~-~Lasgs--dd~I~IwDl~-t~~~i~~l~ 712 (784)
++-.+.-|..||.+ +.+.+..+. ++ ...+..|++ .++++ ||++++ ++...|||.. +.+.+..|.
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 99998778888865 345565543 22 236888887 45556 677666 3499999997 677777775
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.05 E-value=0.00096 Score=75.35 Aligned_cols=239 Identities=10% Similarity=0.067 Sum_probs=143.8
Q ss_pred ceEEEEEcC-CCCEEEEE-eCCCeEEEEECCCCceeeecCCC---CCCeEEEEE-------ccCCCEEEEEeCCC-----
Q 047260 509 KVTCCHFSS-DGKLLASS-GHDRKVVLWNMDTLQTESTPEDH---KSVVTDVRF-------RPNSSQLATASVDK----- 571 (784)
Q Consensus 509 ~V~~l~fsp-dg~~Lasg-s~Dg~I~IWd~~t~~~~~~l~~h---~~~It~i~f-------spdg~~Latgs~Dg----- 571 (784)
....|+|+| +...|+++ ...+.|++.|++++.....+... ......|+| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 34445444 44467999999887665544322 235899999 99999777776654
Q ss_pred --eEEEEcCCC-Cccee----eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCC-------CCee----------
Q 047260 572 --SVRLWDAAN-PNFCS----QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSIN-------PFLC---------- 627 (784)
Q Consensus 572 --~I~IWdl~~-~~~~~----~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~-------~~~~---------- 627 (784)
.|.+++... +.... ..+.. -.....++++|++..++++...++.|..+|+. +...
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 255665333 12110 11111 12345778899878788888889999999987 3332
Q ss_pred ----EEeec--CCeeEEEEecCCCEEEEEEC-CCcEEEEEC--CCCeE--EEEEeCC---C------------CCEE-EE
Q 047260 628 ----THITK--GGTAQVRFQPRIGQLLAAAS-DKVVSIFDI--ETDRQ--THSLQGH---A------------ELVN-YI 680 (784)
Q Consensus 628 ----~~~~~--~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl--~t~~~--i~~l~~h---~------------~~V~-sl 680 (784)
+.... .....++|+|+++.|+++.. ...|+.+|. ..+.. ...+.+. . .... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 11121 23578999999997777665 678888665 33322 1222221 1 1233 45
Q ss_pred EEc-------CCCCEEEEEeCC-eEEEEeCCCCceEEEeccCC------------------------CceEEEEEecCCC
Q 047260 681 CWD-------TNGDYLASVSQN-LVKVWSMASGECIQELSSNG------------------------NQFHSCVFHPSYS 728 (784)
Q Consensus 681 ~~s-------pdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~~~------------------------~~I~sl~fspdg~ 728 (784)
+.. +++.++++-..+ .|+.++ .++ .+.++.+.. .....++++++..
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 554 455555554444 999998 456 344543221 2246788888633
Q ss_pred EEEEEEC-CCeEEEEECCCCceE
Q 047260 729 TLLVVGG-ISSLELWNMAENKSM 750 (784)
Q Consensus 729 ~L~s~s~-dg~I~Iwdl~~~~~~ 750 (784)
.|+++.. ...|+.+++....+.
T Consensus 457 ~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp EEEEEETTTTEEEEEEECCCC--
T ss_pred EEEEEeCCCCEEEEEECCCCccc
Confidence 4555544 468888888766544
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.00 E-value=0.0017 Score=73.41 Aligned_cols=230 Identities=15% Similarity=0.091 Sum_probs=136.1
Q ss_pred CeEEEEEcc-CCCEEEEEeC-CCeEEEEcCCCCcceeeeccC---CCCCeEEEEE-------cCCCCcEEEEEeCCC---
Q 047260 551 VVTDVRFRP-NSSQLATASV-DKSVRLWDAANPNFCSQAYTG---HSSPIMSLDF-------HPKKTDLFCFCDNDN--- 615 (784)
Q Consensus 551 ~It~i~fsp-dg~~Latgs~-Dg~I~IWdl~~~~~~~~~~~~---h~~~V~sl~~-------sp~~~~ll~sgs~dg--- 615 (784)
....|+|+| +...|+.+.. .+.|++.|++++. +...... .......|+| ++++..++++...++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 467899998 3555555544 4678888988755 2222221 2235899999 999987777766552
Q ss_pred ---eEEEEeCCC---C------eeEEeecCCeeEEEEecCCCEEEEEEC-CCcEEEEECC-------CCeE---------
Q 047260 616 ---EIQYWSINP---F------LCTHITKGGTAQVRFQPRIGQLLAAAS-DKVVSIFDIE-------TDRQ--------- 666 (784)
Q Consensus 616 ---~I~iwDl~~---~------~~~~~~~~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~-------t~~~--------- 666 (784)
.|.+++... . ..+..+ .....++++|+++.|+++.. ++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 366665443 1 122222 34567889997777776665 6889999987 4543
Q ss_pred --EEE-Ee-CCCCCEEEEEEcCCCCEEEEEe-CC-eEEEEeCC--CCce--EEEeccC---C------------CceE-E
Q 047260 667 --THS-LQ-GHAELVNYICWDTNGDYLASVS-QN-LVKVWSMA--SGEC--IQELSSN---G------------NQFH-S 720 (784)
Q Consensus 667 --i~~-l~-~h~~~V~sl~~spdg~~Lasgs-dd-~I~IwDl~--t~~~--i~~l~~~---~------------~~I~-s 720 (784)
... +. +.......|+|+|+|++|+.+. .. .|+.++.. .+.. ...+.+. . .... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 112 22 2234467899999999666655 33 88886543 3321 1222211 0 1223 3
Q ss_pred EEEe-------cCCCEEEEEECCCeEEEEECCCCceEEeccc------------------------CCceEEEEEeCC-C
Q 047260 721 CVFH-------PSYSTLLVVGGISSLELWNMAENKSMTIAAH------------------------ENIISALAQSPV-T 768 (784)
Q Consensus 721 l~fs-------pdg~~L~s~s~dg~I~Iwdl~~~~~~~~~~h------------------------~~~V~slafspd-g 768 (784)
++.. +++.++++=....+|+.++ .++...++.+. -.....|+++++ +
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 4444 3444444444557899998 45555544322 124678999997 5
Q ss_pred CEEEEEECCCcEEEe
Q 047260 769 GMVASASHDSSVKLW 783 (784)
Q Consensus 769 ~~LaSgs~DG~V~IW 783 (784)
.++++=....+|+.+
T Consensus 457 ~lyVaD~~N~rIrki 471 (496)
T 3kya_A 457 MFYVHDQVGHTIRTI 471 (496)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCEEEEE
Confidence 444444456677765
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.98 E-value=0.0056 Score=73.41 Aligned_cols=214 Identities=10% Similarity=0.011 Sum_probs=139.2
Q ss_pred EEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC----eeEEeec---CCe
Q 047260 563 QLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF----LCTHITK---GGT 635 (784)
Q Consensus 563 ~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~----~~~~~~~---~~v 635 (784)
+|+.+ ....|+..++..... ... ......+..|+|++.+..++++-...+.|+.++++.. .....+. ...
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~-~~l-~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEY-TSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCC-EEE-ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred ccccc-cccceeEeeccCCcc-eee-ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 44444 345688888876542 222 2334568899999977778888777889999998752 2222222 456
Q ss_pred eEEEEecCCCEEEEEEC-CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe--C-CeEEEEeCCCCceEEEe
Q 047260 636 AQVRFQPRIGQLLAAAS-DKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS--Q-NLVKVWSMASGECIQEL 711 (784)
Q Consensus 636 ~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs--d-d~I~IwDl~t~~~i~~l 711 (784)
..|++.+.++.|+++.. .+.|.++++........+.........|+++|.+.+|+... . ..|.+.++........+
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 78999988888887776 68999999986554444444555688999999766665554 2 47888888654443344
Q ss_pred ccCCCceEEEEEecCCCEEEEEECC-CeEEEEECCCCceEEecc---cCCceEEEEEeCCCCEEEEEEC-CCcEE
Q 047260 712 SSNGNQFHSCVFHPSYSTLLVVGGI-SSLELWNMAENKSMTIAA---HENIISALAQSPVTGMVASASH-DSSVK 781 (784)
Q Consensus 712 ~~~~~~I~sl~fspdg~~L~s~s~d-g~I~Iwdl~~~~~~~~~~---h~~~V~slafspdg~~LaSgs~-DG~V~ 781 (784)
...-.....|++++.+..|+.+... +.|..+++.......+.. .-....+|++. +..|+.+.. .+.|.
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIF 626 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEE
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEE
Confidence 4444567899999888888877654 589999997765554432 12334566664 334554443 34443
No 291
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.97 E-value=0.0042 Score=66.32 Aligned_cols=228 Identities=11% Similarity=0.069 Sum_probs=133.7
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecC---CCCCCeEEEEEccCCCEEEEEeCCCeE-EEEcCCCCc
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPE---DHKSVVTDVRFRPNSSQLATASVDKSV-RLWDAANPN 582 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~---~h~~~It~i~fspdg~~Latgs~Dg~I-~IWdl~~~~ 582 (784)
...+.+|.|++ +..++ ++.++.|.. ..+.++.-..+. .+...+..|.+.+++..++++ .++.| +-.| .++
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~D--gG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKD--SGK 152 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESS--TTS
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcC--CCC
Confidence 34588888976 44444 456665544 333333322222 244567888887777666555 45544 3333 233
Q ss_pred ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeC--CCCeeEEe-ecCCeeEEEEecCCCEEEEEECCCcEEEE
Q 047260 583 FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSI--NPFLCTHI-TKGGTAQVRFQPRIGQLLAAASDKVVSIF 659 (784)
Q Consensus 583 ~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl--~~~~~~~~-~~~~v~~v~fsp~~~~Ll~~s~Dg~I~Iw 659 (784)
.-......+...+..+.+.+++. +++++...+..+-+|- .+...+.. ....+..+.+.+++. +++++.+|.|++.
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~-~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~-~~~~~~~G~~~~s 230 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGE-YVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR-LWMIVNGGKIAFS 230 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSC-EEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-EEEEETTTEEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCc-EEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-EEEEeCCceEEEe
Confidence 23333345566789999998765 5555544444444443 23333321 234667788888765 5566778888776
Q ss_pred ECCCCeEEEEEeC----CCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEecc---CCCceEEEEEecCCCEEEE
Q 047260 660 DIETDRQTHSLQG----HAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSS---NGNQFHSCVFHPSYSTLLV 732 (784)
Q Consensus 660 Dl~t~~~i~~l~~----h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~---~~~~I~sl~fspdg~~L~s 732 (784)
+...++....+.. ....+.++.+.+++.+++++.++.| ++....++.-..+.. ....+.++.|.+++ .+++
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~ 308 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFI 308 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEE
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEE
Confidence 5333433332221 2235889999998998888887766 445555544444432 23567888887554 5778
Q ss_pred EECCCeEEEEEC
Q 047260 733 VGGISSLELWNM 744 (784)
Q Consensus 733 ~s~dg~I~Iwdl 744 (784)
++.+|.|..++-
T Consensus 309 ~G~~G~i~~~~~ 320 (327)
T 2xbg_A 309 LGQKGILLRYVT 320 (327)
T ss_dssp ECSTTEEEEECC
T ss_pred EcCCceEEEEcC
Confidence 888898777653
No 292
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.95 E-value=0.0077 Score=70.44 Aligned_cols=216 Identities=11% Similarity=-0.000 Sum_probs=142.6
Q ss_pred EEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEE
Q 047260 563 QLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVR 639 (784)
Q Consensus 563 ~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~ 639 (784)
+|+.+ ....|+..|++............-..+..|+|++.+..++++-..++.|..++++......... .....++
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 45544 4578999999865432222222235688999999888788887788999999987643333333 3467899
Q ss_pred EecCCCEEEEEEC-CCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe---CCeEEEEeCCCCceEEEeccCC
Q 047260 640 FQPRIGQLLAAAS-DKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVS---QNLVKVWSMASGECIQELSSNG 715 (784)
Q Consensus 640 fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs---dd~I~IwDl~t~~~i~~l~~~~ 715 (784)
+.+.++.|+.+.. .+.|.+.++........+...-.....|+++|...+|+... ...|...++........+ ..-
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~ 165 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNV 165 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSC
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCC
Confidence 9988888877766 68899999875533223333445678999998655555554 237888887654433223 344
Q ss_pred CceEEEEEecCCCEEEEEECC-CeEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEEEC-CCcEEE
Q 047260 716 NQFHSCVFHPSYSTLLVVGGI-SSLELWNMAENKSMTIAAHENIISALAQSPVTGMVASASH-DSSVKL 782 (784)
Q Consensus 716 ~~I~sl~fspdg~~L~s~s~d-g~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~-DG~V~I 782 (784)
.....+++++++..|+.+... +.|..+|+.......+........+|++.. + .|+.+.. .+.|..
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~-~ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-D-YIYWTDWSRRSIER 232 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-T-EEEEEETTTTEEEE
T ss_pred CCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-C-EEEEecCCCCEEEE
Confidence 567899999988888777664 689999998765543333444566777765 3 4444443 555554
No 293
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.93 E-value=0.046 Score=65.13 Aligned_cols=261 Identities=11% Similarity=0.079 Sum_probs=154.8
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceee
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQ 586 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~ 586 (784)
...|.++....+| .|.+|+.+| +.+||..+.+...........|.++.. .++ .|..++.+ -|..+|..+......
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~ 136 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSF 136 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEe
Confidence 4568998887776 566666665 889998875443211122345777754 344 56666666 588888876542211
Q ss_pred ec--c-CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee-c-------CCeeEEEEecCCCEEEEEECCCc
Q 047260 587 AY--T-GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT-K-------GGTAQVRFQPRIGQLLAAASDKV 655 (784)
Q Consensus 587 ~~--~-~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~-~-------~~v~~v~fsp~~~~Ll~~s~Dg~ 655 (784)
.. . .....|.++....++. +.+ +.. +-|..+|..+....... . ..+.++....+++.|.+++. +-
T Consensus 137 ~~~~~~l~~~~i~~i~~d~~g~-lWi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G 212 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTKDNQ-IYV-GTY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY 212 (758)
T ss_dssp CHHHHCCSCSCEEEEEECTTCC-EEE-EET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE
T ss_pred ccCCCCcCCCeEEEEEEcCCCC-EEE-EeC-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CC
Confidence 00 1 1234688888877766 443 343 45778887765443221 1 13667777777777777774 56
Q ss_pred EEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEec-------cCCCceEEEEEecCCC
Q 047260 656 VSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELS-------SNGNQFHSCVFHPSYS 728 (784)
Q Consensus 656 I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~-------~~~~~I~sl~fspdg~ 728 (784)
|..+|..+++...........|.++....+|.+.+.. ++-|.+++..+++...... .....|.++....++.
T Consensus 213 l~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~ 291 (758)
T 3ott_A 213 LFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-DNGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN 291 (758)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-TTEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC
T ss_pred CeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-CCceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC
Confidence 8889988765432211123468888888888877655 5678889987765432211 1234578888777776
Q ss_pred EEEEEECCCeEEEEECCCCce-EEec-----ccCCceEEEEEeCCCCEEEEEECCCcE
Q 047260 729 TLLVVGGISSLELWNMAENKS-MTIA-----AHENIISALAQSPVTGMVASASHDSSV 780 (784)
Q Consensus 729 ~L~s~s~dg~I~Iwdl~~~~~-~~~~-----~h~~~V~slafspdg~~LaSgs~DG~V 780 (784)
|.+|+..| |.++.....-. .... .....|.++....+|.+.+. +.+|.+
T Consensus 292 -lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~Gl~ 346 (758)
T 3ott_A 292 -IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANGLI 346 (758)
T ss_dssp -EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTEEE
T ss_pred -EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCcce
Confidence 66666666 55543322111 1111 12346888888777766554 455543
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.89 E-value=0.017 Score=67.53 Aligned_cols=222 Identities=9% Similarity=-0.012 Sum_probs=147.4
Q ss_pred EEEEEeCCCeEEEEECCCCceeeecC-CCCCCeEEEEEccCCCEEEE-EeCCCeEEEEcCCCCcceeeeccCCCCCeEEE
Q 047260 521 LLASSGHDRKVVLWNMDTLQTESTPE-DHKSVVTDVRFRPNSSQLAT-ASVDKSVRLWDAANPNFCSQAYTGHSSPIMSL 598 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~~~~~l~-~h~~~It~i~fspdg~~Lat-gs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl 598 (784)
+|+.+ ....|+..++++......+. ..-..+..|+|++.+..|+. -..++.|..++++... ....+.........|
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-LEHVVEFGLDYPEGM 85 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-cEEEEeCCCCCcceE
Confidence 45444 45679999998655433332 22356889999996655554 4557889999887543 222232222456788
Q ss_pred EEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee---cCCeeEEEEecCCCEEEEEEC--CCcEEEEECCCCeEEEEEeCC
Q 047260 599 DFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT---KGGTAQVRFQPRIGQLLAAAS--DKVVSIFDIETDRQTHSLQGH 673 (784)
Q Consensus 599 ~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~---~~~v~~v~fsp~~~~Ll~~s~--Dg~I~IwDl~t~~~i~~l~~h 673 (784)
++.+.+..++++-...+.|.+.+++........ -.....+++.|..+.|+.+.. .+.|...++........+ ..
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~ 164 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PN 164 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CS
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CC
Confidence 888877778888777899999999754332222 245678999998888888764 467888887654333223 34
Q ss_pred CCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEEC-CCeEEEEECCCCc
Q 047260 674 AELVNYICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGG-ISSLELWNMAENK 748 (784)
Q Consensus 674 ~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~-dg~I~Iwdl~~~~ 748 (784)
-.....|++++++..|+.+.. +.|..+|+..... ..+.........+++.. ..|+.+.. .+.|...|..+++
T Consensus 165 ~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 165 VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEECCCCC
Confidence 557789999998777777663 3899999876433 33333334456777765 35655554 5789989876654
No 295
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.84 E-value=0.0051 Score=71.83 Aligned_cols=220 Identities=8% Similarity=0.004 Sum_probs=134.8
Q ss_pred CCeEEEEECCCCc-eeeecCCCCCCeEEEEEccCCCEEEEEe-CCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCC
Q 047260 528 DRKVVLWNMDTLQ-TESTPEDHKSVVTDVRFRPNSSQLATAS-VDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKT 605 (784)
Q Consensus 528 Dg~I~IWd~~t~~-~~~~l~~h~~~It~i~fspdg~~Latgs-~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~ 605 (784)
...|++.++.... ....+...-..+..|+|++.+..|+.+. ..+.|..++++........+...-.....+++.+.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 5568888887543 2222223445678999999666666554 4678888888764322223333335688999999888
Q ss_pred cEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC--CCcEEEEECCCCeEEEEEeCCCCCEEEE
Q 047260 606 DLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS--DKVVSIFDIETDRQTHSLQGHAELVNYI 680 (784)
Q Consensus 606 ~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~--Dg~I~IwDl~t~~~i~~l~~h~~~V~sl 680 (784)
.++++-...+.|.+.+++......... .....|++.|.++.|+.+.. .+.|...++........+...-...+.|
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 788888888999999998654333322 45678999998888887774 3677777776443333333344567899
Q ss_pred EEcCCCCEEEEEeC--CeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEE-CCCeEEEEECCCCce
Q 047260 681 CWDTNGDYLASVSQ--NLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVG-GISSLELWNMAENKS 749 (784)
Q Consensus 681 ~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s-~dg~I~Iwdl~~~~~ 749 (784)
++++++..|+.+.. +.|..+|+........+.........+++..+ .|+.+. ..+.|...|..+++.
T Consensus 177 ald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 177 TLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCCC
T ss_pred EEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcc
Confidence 99998777766663 38999998654332222212222345666555 555554 346788888876643
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.81 E-value=0.0024 Score=69.03 Aligned_cols=223 Identities=9% Similarity=0.060 Sum_probs=120.5
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCce--eeec---CCCCCCeEEEEEccC---CCEEEEEeC-C-----C
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQT--ESTP---EDHKSVVTDVRFRPN---SSQLATASV-D-----K 571 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~--~~~l---~~h~~~It~i~fspd---g~~Latgs~-D-----g 571 (784)
.-.....++|.|||++++ +..+|.|++++ +++. +..+ .........|+|+|+ +..|+++.. + .
T Consensus 29 ~l~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CCSCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 344578999999998555 46679999998 3332 2222 122457899999998 555555543 2 5
Q ss_pred eEEEEcCCCCc-----ceeeecc---CCCCCeEEEEEcCCCCcEEEEEeC-------------CCeEEEEeCCCC-----
Q 047260 572 SVRLWDAANPN-----FCSQAYT---GHSSPIMSLDFHPKKTDLFCFCDN-------------DNEIQYWSINPF----- 625 (784)
Q Consensus 572 ~I~IWdl~~~~-----~~~~~~~---~h~~~V~sl~~sp~~~~ll~sgs~-------------dg~I~iwDl~~~----- 625 (784)
.|..|+..... .+...+. +.......|+|.|++. ++++.+. .|.|.-++.+..
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 67778776431 1111122 1112346899999995 5554322 256666665431
Q ss_pred ---------eeEEee-cCCeeEEEEecCCCEEEEEEC-CCc--------EEEEECCC----------------CeEEEEE
Q 047260 626 ---------LCTHIT-KGGTAQVRFQPRIGQLLAAAS-DKV--------VSIFDIET----------------DRQTHSL 670 (784)
Q Consensus 626 ---------~~~~~~-~~~v~~v~fsp~~~~Ll~~s~-Dg~--------I~IwDl~t----------------~~~i~~l 670 (784)
..+... -.....++|+|+...|+++.. ... |.+..... ..++..+
T Consensus 185 pf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred cccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 011111 123456789995555555544 222 33322111 0122223
Q ss_pred eCCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCce------EEEeccCCCceEEEEEecCCCEEEEEE
Q 047260 671 QGHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGEC------IQELSSNGNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 671 ~~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~------i~~l~~~~~~I~sl~fspdg~~L~s~s 734 (784)
. +......++| .+|.++++...+ .|...++..... ...+......+..+++.|+|..+++..
T Consensus 265 ~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 P-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp T-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred C-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 2 2234566777 456655554444 777777654321 222222335678899999987555543
No 297
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.79 E-value=0.057 Score=57.12 Aligned_cols=233 Identities=13% Similarity=0.192 Sum_probs=155.2
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCC
Q 047260 513 CHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHS 592 (784)
Q Consensus 513 l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~ 592 (784)
.-.+|..+.||.-. ...+.|||+++...++.+.- ...|.-=.|-.+. .|+..+ +..|.-|+++....+.+.+..|.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCG
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecch
Confidence 34578778777665 67899999999888887753 4577777777544 455554 46899999987555666666553
Q ss_pred ----CCeEEEEEcCCCCcEEEEEe------CCCeEEEEeCCCCeeEEeecCCeeEEE-EecCCC----EEEEEEC----C
Q 047260 593 ----SPIMSLDFHPKKTDLFCFCD------NDNEIQYWSINPFLCTHITKGGTAQVR-FQPRIG----QLLAAAS----D 653 (784)
Q Consensus 593 ----~~V~sl~~sp~~~~ll~sgs------~dg~I~iwDl~~~~~~~~~~~~v~~v~-fsp~~~----~Ll~~s~----D 653 (784)
..|..-..+++..+++++|- -.|.+.+|..+... ...++++..++. +-.++. .|++-.. .
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 45777777888888877764 23678888887543 344555555443 322222 2333222 2
Q ss_pred CcEEEEECCCC--------eEEEE-EeC---CCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCceEEEeccCCCceEE
Q 047260 654 KVVSIFDIETD--------RQTHS-LQG---HAELVNYICWDTNGDYLASVS-QNLVKVWSMASGECIQELSSNGNQFHS 720 (784)
Q Consensus 654 g~I~IwDl~t~--------~~i~~-l~~---h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~~i~~l~~~~~~I~s 720 (784)
+.++|.++... +.... +-. -.+--.++..++.-.+++..+ .|.|.+||+.++.++..-+-....|..
T Consensus 227 ~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ 306 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 306 (365)
T ss_dssp EEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred cEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEE
Confidence 68999988432 11111 111 233445666676656666555 569999999999999988888788877
Q ss_pred EEEecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 721 CVFHPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 721 l~fspdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
.+.+....-+++....|.|.-..+++...+
T Consensus 307 ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 307 TAPHEATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp EEEEGGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred ecccCCCCcEEEEcCCCEEEEEEECcccEe
Confidence 777766667888888888887777776544
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.78 E-value=0.00011 Score=87.46 Aligned_cols=221 Identities=8% Similarity=-0.032 Sum_probs=134.3
Q ss_pred CCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEe-CCCeEEEEcCCCC---cceeeeccCCCCCeEEEEEcCC
Q 047260 528 DRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATAS-VDKSVRLWDAANP---NFCSQAYTGHSSPIMSLDFHPK 603 (784)
Q Consensus 528 Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs-~Dg~I~IWdl~~~---~~~~~~~~~h~~~V~sl~~sp~ 603 (784)
.+.|++.++.+......+.. ...+..|+|++.+..|+.+. ..+.|+.+++... ......+.........|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 45788888887665544433 34567899998766666554 4578999998751 1112222222233566888876
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC-C-CcEEEEECCCCeEEEEEeCCCCCEE
Q 047260 604 KTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS-D-KVVSIFDIETDRQTHSLQGHAELVN 678 (784)
Q Consensus 604 ~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~-D-g~I~IwDl~t~~~i~~l~~h~~~V~ 678 (784)
+..++++-...+.|.++++.......... .....+++.|.+++|+.+.. . +.|.++++........+...-...+
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 543 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCcc
Confidence 66677776677899999988654443333 34567889998777776654 2 6888888764322222222234456
Q ss_pred EEEEcCCCCEEEEEeC--CeEEEEeCCCCceEEEecc--CCCceEEEEEecCCCEEEEEE-CCCeEEEEECCCCceEE
Q 047260 679 YICWDTNGDYLASVSQ--NLVKVWSMASGECIQELSS--NGNQFHSCVFHPSYSTLLVVG-GISSLELWNMAENKSMT 751 (784)
Q Consensus 679 sl~~spdg~~Lasgsd--d~I~IwDl~t~~~i~~l~~--~~~~I~sl~fspdg~~L~s~s-~dg~I~Iwdl~~~~~~~ 751 (784)
.|+|++++..|+.+.. +.|.++|+........+.. .......+++..+ .|+.+. ..+.|..++..+++.+.
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEEE
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCceE
Confidence 7999987666655553 3899999865332222221 1123345566544 444444 45789999987776653
No 299
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.76 E-value=0.063 Score=63.92 Aligned_cols=258 Identities=11% Similarity=0.076 Sum_probs=153.2
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeec-CCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCccee
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTP-EDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCS 585 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l-~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~ 585 (784)
...|.||.-..+|. |..|..+| +..||-...+..... ......|.++....++ .|..|+.+| +..||..+....
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~- 95 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE- 95 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC-
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE-
Confidence 56799999988885 55567777 667774332211111 1123568888877665 566777665 788998765421
Q ss_pred eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEee-------cCCeeEEEEecCCCEEEEEECCCcEEE
Q 047260 586 QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHIT-------KGGTAQVRFQPRIGQLLAAASDKVVSI 658 (784)
Q Consensus 586 ~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~-------~~~v~~v~fsp~~~~Ll~~s~Dg~I~I 658 (784)
.........|.++.. .++ .+.+ ++.+ .|..+|..+.+..... ...+.++....++. |.+++.+ -|..
T Consensus 96 ~~~~~~~~~i~~i~~-~~g-~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~-Gl~~ 169 (758)
T 3ott_A 96 QPETDFPTDVRTMAL-QGD-TLWL-GALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQ-IYVGTYN-GLCR 169 (758)
T ss_dssp CCSCCCCSCEEEEEE-ETT-EEEE-EETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCC-EEEEETT-EEEE
T ss_pred CcccCCCceEEEEEe-cCC-cEEE-EcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCC-EEEEeCC-CHhh
Confidence 111112345777654 343 3444 4444 6888888765443321 13456666666554 5556654 5888
Q ss_pred EECCCCeEEEEEeC-----CCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEE
Q 047260 659 FDIETDRQTHSLQG-----HAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVV 733 (784)
Q Consensus 659 wDl~t~~~i~~l~~-----h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~ 733 (784)
||..+++....... ....|.++..+.++..|..++++-|..+|..+++...........|.++....++. |.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWig 248 (758)
T 3ott_A 170 YIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGD-LLAG 248 (758)
T ss_dssp EETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCC-EEEE
T ss_pred CccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCC-EEEE
Confidence 89877654322111 12248889888877755555555788899887654322111234577887777776 5555
Q ss_pred ECCCeEEEEECCCCceEEecc--------cCCceEEEEEeCCCCEEEEEECCC
Q 047260 734 GGISSLELWNMAENKSMTIAA--------HENIISALAQSPVTGMVASASHDS 778 (784)
Q Consensus 734 s~dg~I~Iwdl~~~~~~~~~~--------h~~~V~slafspdg~~LaSgs~DG 778 (784)
+. +-|.+++..++....+.. ....|.++....++.+.+ |+..|
T Consensus 249 T~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G 299 (758)
T 3ott_A 249 TD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG 299 (758)
T ss_dssp ET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS
T ss_pred eC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc
Confidence 54 458889887765443321 234588998887776555 44445
No 300
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.75 E-value=0.015 Score=62.94 Aligned_cols=225 Identities=9% Similarity=0.002 Sum_probs=125.5
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-eeeec---CCCCCCeEEEEEccC---CCEEEEEeC----C----
Q 047260 506 RNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ-TESTP---EDHKSVVTDVRFRPN---SSQLATASV----D---- 570 (784)
Q Consensus 506 H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~-~~~~l---~~h~~~It~i~fspd---g~~Latgs~----D---- 570 (784)
.-.....++|.|||++++ +..+|.|++++. +++ .+..+ .........|+|+|+ +..|+++.. +
T Consensus 27 ~l~~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCSCEEEEEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 345688999999998555 566799999974 444 22222 122356899999997 555555443 2
Q ss_pred CeEEEEcCCCC--c----c-eeeecc-CCCCCeEEEEEcCCCCcEEEEEeC-------------CCeEEEEeCCCC----
Q 047260 571 KSVRLWDAANP--N----F-CSQAYT-GHSSPIMSLDFHPKKTDLFCFCDN-------------DNEIQYWSINPF---- 625 (784)
Q Consensus 571 g~I~IWdl~~~--~----~-~~~~~~-~h~~~V~sl~~sp~~~~ll~sgs~-------------dg~I~iwDl~~~---- 625 (784)
..|..|+.... . . +...+. ........|.|.|++. ++++.+. .|.|.-++.+..
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56777776643 1 1 111111 1112346799999986 5544322 245666665432
Q ss_pred ------eeEEeecCCeeEEEEecCCCEEEEEECCC----cEEEEECCC----------------CeEEEEEeCCCCCEEE
Q 047260 626 ------LCTHITKGGTAQVRFQPRIGQLLAAASDK----VVSIFDIET----------------DRQTHSLQGHAELVNY 679 (784)
Q Consensus 626 ------~~~~~~~~~v~~v~fsp~~~~Ll~~s~Dg----~I~IwDl~t----------------~~~i~~l~~h~~~V~s 679 (784)
+....-......++|+|+...|+++.... .|.+...-. ..++..+.........
T Consensus 184 npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 184 NPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp SSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 11111113456789999555566665421 244332110 0122333112345677
Q ss_pred EEEc-------CCCCEEEEEeCC-eEEEEeCCCC-ceE--EEec-cCCCceEEEEEecCCCEEEEE
Q 047260 680 ICWD-------TNGDYLASVSQN-LVKVWSMASG-ECI--QELS-SNGNQFHSCVFHPSYSTLLVV 733 (784)
Q Consensus 680 l~~s-------pdg~~Lasgsdd-~I~IwDl~t~-~~i--~~l~-~~~~~I~sl~fspdg~~L~s~ 733 (784)
++|. .+|.++++...+ .|...++... +.. ..+. .....+..+++.|+|..+++.
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred eEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 8883 467666655444 8888888753 322 2332 224568899999999655444
No 301
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.74 E-value=0.025 Score=70.68 Aligned_cols=272 Identities=13% Similarity=0.127 Sum_probs=152.6
Q ss_pred CCCceEEEEEcCC------CCEEEEEeC-CCeEEEEECCCCceeeecCC-CCCCeEEEEEcc--CCCEEEEEeCCCeEEE
Q 047260 506 RNSKVTCCHFSSD------GKLLASSGH-DRKVVLWNMDTLQTESTPED-HKSVVTDVRFRP--NSSQLATASVDKSVRL 575 (784)
Q Consensus 506 H~~~V~~l~fspd------g~~Lasgs~-Dg~I~IWd~~t~~~~~~l~~-h~~~It~i~fsp--dg~~Latgs~Dg~I~I 575 (784)
-.+.|.|+++.+. ++++|+|.. |++|+|+++.+.+.+....- ......++.+.. ...+|..|-.||.+..
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 3568999999863 369999996 99999999998776654321 112344444432 3457899999999866
Q ss_pred EcCC--CCccee--eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec-CCeeEE-EEecCC--CEE
Q 047260 576 WDAA--NPNFCS--QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK-GGTAQV-RFQPRI--GQL 647 (784)
Q Consensus 576 Wdl~--~~~~~~--~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~-~~v~~v-~fsp~~--~~L 647 (784)
+.++ ++.... ..+.| ..++.-..+...+..-+++++..-.+. |.-+..-...... ..+..+ .|+... +-+
T Consensus 632 ~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~li-y~~~~~l~~s~l~~~~v~~~~~F~se~~~~g~ 709 (1158)
T 3ei3_A 632 FGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVI-YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSL 709 (1158)
T ss_dssp EEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEE-EESSSSEEEEEBSSSCCCEEEEECCSSSTTEE
T ss_pred EEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEE-EEcCCceEEeccChHHhceEeccCcccCCCcE
Confidence 6554 333211 12333 345554445444444444444333333 3333222222222 233333 354322 234
Q ss_pred EEEECCCcEEEEECCCCe--EEEEEeCCCCCEEEEEEcCCCCEEEEEe-C------------------------------
Q 047260 648 LAAASDKVVSIFDIETDR--QTHSLQGHAELVNYICWDTNGDYLASVS-Q------------------------------ 694 (784)
Q Consensus 648 l~~s~Dg~I~IwDl~t~~--~i~~l~~h~~~V~sl~~spdg~~Lasgs-d------------------------------ 694 (784)
+ +..++.++|.-+.... .++++. -...+..++++|+.+.++.+. +
T Consensus 710 v-~~~~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1158)
T 3ei3_A 710 A-LANNSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK 787 (1158)
T ss_dssp E-EECSSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCC
T ss_pred E-EEcCCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccc
Confidence 4 4445668888775432 233333 335667777777665443322 0
Q ss_pred -------------------CeEEEEeCCCCceEEEeccCCC-ceEEEEE---ecC-CCEEEEEE----------CCCeEE
Q 047260 695 -------------------NLVKVWSMASGECIQELSSNGN-QFHSCVF---HPS-YSTLLVVG----------GISSLE 740 (784)
Q Consensus 695 -------------------d~I~IwDl~t~~~i~~l~~~~~-~I~sl~f---spd-g~~L~s~s----------~dg~I~ 740 (784)
..|++.|..+.+.+..+.-..+ .+.+++. ..+ ..+|++|+ ..|.|+
T Consensus 788 ~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~ 867 (1158)
T 3ei3_A 788 LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIV 867 (1158)
T ss_dssp CC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEE
T ss_pred cccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEE
Confidence 1477888888877766653332 3444443 222 46788887 237899
Q ss_pred EEECCCCceE--EecccCCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 741 LWNMAENKSM--TIAAHENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 741 Iwdl~~~~~~--~~~~h~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
+|++..++.. .....++.|++++-- .| +|++|- ..+|+|||
T Consensus 868 vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~ 910 (1158)
T 3ei3_A 868 VFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASI-NSTVRLYE 910 (1158)
T ss_dssp EEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEE-TTEEEEEE
T ss_pred EEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEc-CCEEEEEE
Confidence 9999755433 333567889998854 34 444443 46788875
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.66 E-value=0.01 Score=64.15 Aligned_cols=219 Identities=13% Similarity=0.134 Sum_probs=121.3
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc-eee---eccCCCCCeEEEEEcCC---CCcEEEEEeCC-----CeE
Q 047260 550 SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF-CSQ---AYTGHSSPIMSLDFHPK---KTDLFCFCDND-----NEI 617 (784)
Q Consensus 550 ~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~-~~~---~~~~h~~~V~sl~~sp~---~~~ll~sgs~d-----g~I 617 (784)
.....|+|.|++++++ +..+|.|++++ ++.. ... .+.........|+|+|+ +..++++.... +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 3567999999998554 45679999998 3331 111 11122356889999998 55566655433 678
Q ss_pred EEEeCCCC-----eeE-Eeec------CCeeEEEEecCCCEEEEEEC-------------CCcEEEEECCCC--------
Q 047260 618 QYWSINPF-----LCT-HITK------GGTAQVRFQPRIGQLLAAAS-------------DKVVSIFDIETD-------- 664 (784)
Q Consensus 618 ~iwDl~~~-----~~~-~~~~------~~v~~v~fsp~~~~Ll~~s~-------------Dg~I~IwDl~t~-------- 664 (784)
..|+.... +.+ ..+. .....++|.|++..+++.+. .+.|.-+|....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 88887642 111 1122 12357899999865554332 145666665420
Q ss_pred -----e-EEEEEeCCCCCEEEEEEcC-CCCEEEEEeCC-e--------EEEEeCCC----------------CceEEEec
Q 047260 665 -----R-QTHSLQGHAELVNYICWDT-NGDYLASVSQN-L--------VKVWSMAS----------------GECIQELS 712 (784)
Q Consensus 665 -----~-~i~~l~~h~~~V~sl~~sp-dg~~Lasgsdd-~--------I~IwDl~t----------------~~~i~~l~ 712 (784)
. .+. -.++ .....++|+| ++.++++-... . |.+..... ..++..+.
T Consensus 188 ~~~~~~~~i~-a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 188 GRRGARPEVY-SLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TCTTSCTTEE-EECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred CCCCCCccEE-EEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 0 111 1122 2346689999 67766654322 3 33332111 01222332
Q ss_pred cCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCc-------eEEecccCCceEEEEEeCCCCEEEEEE
Q 047260 713 SNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENK-------SMTIAAHENIISALAQSPVTGMVASAS 775 (784)
Q Consensus 713 ~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~-------~~~~~~h~~~V~slafspdg~~LaSgs 775 (784)
+......++| .++..+++.-..+.|...++.... ...+..-...+..+++.|||.++++..
T Consensus 266 -~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 266 -QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp -TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred -CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 2234466777 355544444445678877776443 122223346799999999998777664
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.65 E-value=0.0079 Score=64.56 Aligned_cols=185 Identities=11% Similarity=0.173 Sum_probs=119.9
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCC----CC---cEEEEEeC--CCeEEEEeCC--CCeeE
Q 047260 560 NSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPK----KT---DLFCFCDN--DNEIQYWSIN--PFLCT 628 (784)
Q Consensus 560 dg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~----~~---~ll~sgs~--dg~I~iwDl~--~~~~~ 628 (784)
...+++....++-+.+||+ +++ .+..+.. +.+..+..-|. +. ..+++... ++.|.+|+++ +.. +
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~-~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGK-MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSC-EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred CccEEEEEcCCCCEEEEcC-CCc-EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 3456777778889999999 555 3444432 56777776663 11 12344444 5899999774 222 2
Q ss_pred Eeec----------CCeeEEEE--ecCCC--EEEEEECCCcEEEEECC-------CCeEEEEEeCCCCCEEEEEEcCCCC
Q 047260 629 HITK----------GGTAQVRF--QPRIG--QLLAAASDKVVSIFDIE-------TDRQTHSLQGHAELVNYICWDTNGD 687 (784)
Q Consensus 629 ~~~~----------~~v~~v~f--sp~~~--~Ll~~s~Dg~I~IwDl~-------t~~~i~~l~~h~~~V~sl~~spdg~ 687 (784)
.... ..+..+|+ ++..+ ++++...+|.+..|++. +.+.++.|.. .+.+..+..++...
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g 192 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYG 192 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTT
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCC
Confidence 2221 33445666 66544 57777889999999882 3466777764 45778888888888
Q ss_pred EEEEEeCC-eEEEEeCC-----CCceEEEec-cC-CCceEEEEE--ecCCC-EEEEEE-CCCeEEEEECC-CCceE
Q 047260 688 YLASVSQN-LVKVWSMA-----SGECIQELS-SN-GNQFHSCVF--HPSYS-TLLVVG-GISSLELWNMA-ENKSM 750 (784)
Q Consensus 688 ~Lasgsdd-~I~IwDl~-----t~~~i~~l~-~~-~~~I~sl~f--spdg~-~L~s~s-~dg~I~Iwdl~-~~~~~ 750 (784)
.|+.+.++ .|..|+.+ +++.+..+. .+ ...+..+++ .++++ +|++++ .++++.+||.. +.+.+
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~v 268 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYV 268 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEE
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEE
Confidence 89999887 66666654 345565553 21 236788877 45555 677777 46799999997 45544
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.62 E-value=0.012 Score=63.56 Aligned_cols=194 Identities=11% Similarity=0.095 Sum_probs=117.7
Q ss_pred CceEEEEEcCCCCEEEEEe------------CCCeEEEEECCC--Ccee-eecCC-----CCCCeEEEEEcc--CCC-EE
Q 047260 508 SKVTCCHFSSDGKLLASSG------------HDRKVVLWNMDT--LQTE-STPED-----HKSVVTDVRFRP--NSS-QL 564 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs------------~Dg~I~IWd~~t--~~~~-~~l~~-----h~~~It~i~fsp--dg~-~L 564 (784)
...-++++.|+|..+++++ .+|.|.++|.++ .+.. ..+.+ .......|.+.+ ++. +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 3455667788876555542 689999999873 2221 11212 224567777766 354 45
Q ss_pred EEEeC---CCeEEEEcCCCCcce---eeeccC-CCCCeEEEEEcCCCCcEEEEEe-----------------CCCeEEEE
Q 047260 565 ATASV---DKSVRLWDAANPNFC---SQAYTG-HSSPIMSLDFHPKKTDLFCFCD-----------------NDNEIQYW 620 (784)
Q Consensus 565 atgs~---Dg~I~IWdl~~~~~~---~~~~~~-h~~~V~sl~~sp~~~~ll~sgs-----------------~dg~I~iw 620 (784)
+++.. +.+|.||+++..... ...+.+ .-.....+.+.+++. ++++.. ..|.|..+
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 55432 467888887654322 222222 124578899999886 444443 12556666
Q ss_pred eCCCCeeEEeecCCeeEEEEecCCCEEEEEEC-CCcEEEEECCC-Ce--EEEEEeCCCCCEEEEEEcC-CCCEEEEEe-C
Q 047260 621 SINPFLCTHITKGGTAQVRFQPRIGQLLAAAS-DKVVSIFDIET-DR--QTHSLQGHAELVNYICWDT-NGDYLASVS-Q 694 (784)
Q Consensus 621 Dl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t-~~--~i~~l~~h~~~V~sl~~sp-dg~~Lasgs-d 694 (784)
|....+.+..--...+.++|+|+++.++++.. .+.|..||+.. ++ ....+ ........+++++ +|++.+++. +
T Consensus 209 d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 209 SPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp CTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred ECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 66433333222356688999999999888876 68999999863 32 22334 2345677899999 599888775 3
Q ss_pred C-eEEEEeCC
Q 047260 695 N-LVKVWSMA 703 (784)
Q Consensus 695 d-~I~IwDl~ 703 (784)
+ .|..||..
T Consensus 288 g~~v~~~~P~ 297 (355)
T 3sre_A 288 GMRIFFYDAE 297 (355)
T ss_dssp HHHHHSCCTT
T ss_pred ceEEEEECCC
Confidence 3 55555544
No 305
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.62 E-value=0.00013 Score=86.69 Aligned_cols=214 Identities=11% Similarity=0.009 Sum_probs=127.3
Q ss_pred CceEEEEEcCCCCEEEEEe-CCCeEEEEECCC----CceeeecCCCCCCeEEEEEccC-CCEEEEEeCCCeEEEEcCCCC
Q 047260 508 SKVTCCHFSSDGKLLASSG-HDRKVVLWNMDT----LQTESTPEDHKSVVTDVRFRPN-SSQLATASVDKSVRLWDAANP 581 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs-~Dg~I~IWd~~t----~~~~~~l~~h~~~It~i~fspd-g~~Latgs~Dg~I~IWdl~~~ 581 (784)
..+..++|++.+..|+.+. ..+.|+.+++.. ......+.........|++.+. ++++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 4567889998766665554 457899999875 2222222222234556788754 444455456788999998764
Q ss_pred cceeeeccCCCCCeEEEEEcCCCCcEEEEEeCC-CeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC-CCcE
Q 047260 582 NFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDND-NEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS-DKVV 656 (784)
Q Consensus 582 ~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d-g~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~-Dg~I 656 (784)
. ....+.........|++.|.+..++++-... +.|.++++.......... .....|+|+++++.|+++.. .+.|
T Consensus 486 ~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 486 K-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp C-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred c-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 3 2222322234567889999777666655333 788888876433222221 34567999998888777766 5789
Q ss_pred EEEECCCCeEEEEEe--CCCCCEEEEEEcCCCCEEEEEeC-CeEEEEeCCCCceEEEeccCCCceEEEEE
Q 047260 657 SIFDIETDRQTHSLQ--GHAELVNYICWDTNGDYLASVSQ-NLVKVWSMASGECIQELSSNGNQFHSCVF 723 (784)
Q Consensus 657 ~IwDl~t~~~i~~l~--~h~~~V~sl~~spdg~~Lasgsd-d~I~IwDl~t~~~i~~l~~~~~~I~sl~f 723 (784)
.++|+........+. ........|++..+ .++++... +.|..+|..+++.+..+.........|++
T Consensus 565 ~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 565 SSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp EEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred EEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence 999987533222222 11122344555544 33333333 38999998888887777544333444443
No 306
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.62 E-value=0.078 Score=66.18 Aligned_cols=225 Identities=11% Similarity=0.054 Sum_probs=132.0
Q ss_pred EEEEccC--CCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeC------------------
Q 047260 554 DVRFRPN--SSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDN------------------ 613 (784)
Q Consensus 554 ~i~fspd--g~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~------------------ 613 (784)
...|+.. ..-++..+ ++.++|..+++..........-...+..++++|....+++.++.
T Consensus 697 ~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 775 (1158)
T 3ei3_A 697 MCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSAS 775 (1158)
T ss_dssp EEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHH
T ss_pred EeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhh
Confidence 3455432 23344443 45688888765332222222234568888888877655444321
Q ss_pred ------------------------------CCeEEEEeCCCCeeEEeec----CCeeEEE---EecC-CCEEEEEE----
Q 047260 614 ------------------------------DNEIQYWSINPFLCTHITK----GGTAQVR---FQPR-IGQLLAAA---- 651 (784)
Q Consensus 614 ------------------------------dg~I~iwDl~~~~~~~~~~----~~v~~v~---fsp~-~~~Ll~~s---- 651 (784)
-+.|++.|..+.+.+..+. ..+.+++ |..+ ..++++|+
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~ 855 (1158)
T 3ei3_A 776 TQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVY 855 (1158)
T ss_dssp HHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECC
T ss_pred hhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecC
Confidence 1246677776666555443 2234443 3222 36777776
Q ss_pred ------CCCcEEEEECCCCeEEEEE-eCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEE-EeccCCCceEEEEE
Q 047260 652 ------SDKVVSIFDIETDRQTHSL-QGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQ-ELSSNGNQFHSCVF 723 (784)
Q Consensus 652 ------~Dg~I~IwDl~t~~~i~~l-~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~-~l~~~~~~I~sl~f 723 (784)
..|.|++|++..++..... ...+++|++++-- +| +|+++-..+|+||++...+.+. ..... ..|..+..
T Consensus 856 ~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l 932 (1158)
T 3ei3_A 856 PEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASINSTVRLYEWTTEKELRTECNHY-NNIMALYL 932 (1158)
T ss_dssp TTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEEEEEEEC-CCSCEEEE
T ss_pred CCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEcCCEEEEEECCCCceEEEEeecc-ccEEEEEE
Confidence 2478999998754332221 1246788888744 34 6666667799999998765444 11112 12333334
Q ss_pred ecCCCEEEEEECCCeEEEE--ECCCCceEEec--ccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 724 HPSYSTLLVVGGISSLELW--NMAENKSMTIA--AHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 724 spdg~~L~s~s~dg~I~Iw--dl~~~~~~~~~--~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
...+.+|++|..-..|.++ +...++...+. .+...++++.|-.+ ..++.+..+|.|.+.
T Consensus 933 ~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl 995 (1158)
T 3ei3_A 933 KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVC 995 (1158)
T ss_dssp EEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEE
T ss_pred eccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEE
Confidence 3456789999888776665 55555544443 35567888888755 477778999998875
No 307
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.57 E-value=0.12 Score=60.32 Aligned_cols=225 Identities=8% Similarity=0.010 Sum_probs=139.3
Q ss_pred EEEEEeCCCeEEEEECCCCceee-ecC-CCCCCeEEEEEccCCCEEEEE-eCCCeEEEEcCCCCcceeeeccCCCCCeEE
Q 047260 521 LLASSGHDRKVVLWNMDTLQTES-TPE-DHKSVVTDVRFRPNSSQLATA-SVDKSVRLWDAANPNFCSQAYTGHSSPIMS 597 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~~~~-~l~-~h~~~It~i~fspdg~~Latg-s~Dg~I~IWdl~~~~~~~~~~~~h~~~V~s 597 (784)
+|+.+. .+.|+..++....... .+. ..-..+..|+|.+.+..|+.+ ...+.|+.++++... ........-..+..
T Consensus 319 ~Ll~~~-~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~-~~~v~~~~~~~p~G 396 (619)
T 3s94_A 319 LLLLAR-RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSG-SQFVVTAQIAHPDG 396 (619)
T ss_dssp EEEEEE-SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCE
T ss_pred EEEEEc-ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCc-cEEEEECCCCCcCc
Confidence 444443 4568888887543211 111 223457899999855555554 457889999987643 22223333345678
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeec---CCeeEEEEecCCCEEEEEEC--CCcEEEEECCCCeEEEEEeC
Q 047260 598 LDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITK---GGTAQVRFQPRIGQLLAAAS--DKVVSIFDIETDRQTHSLQG 672 (784)
Q Consensus 598 l~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~---~~v~~v~fsp~~~~Ll~~s~--Dg~I~IwDl~t~~~i~~l~~ 672 (784)
+++...+..++++-...+.|.+.+++......... .....+++.|..+.|+.+.. ...|...++...........
T Consensus 397 lAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~ 476 (619)
T 3s94_A 397 IAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNT 476 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred eEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeC
Confidence 89987777788887788999999988654333322 45688999998778877764 36777777764333222333
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCC--eEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECC-CeEEEEECCCCce
Q 047260 673 HAELVNYICWDTNGDYLASVSQN--LVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGI-SSLELWNMAENKS 749 (784)
Q Consensus 673 h~~~V~sl~~spdg~~Lasgsdd--~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~d-g~I~Iwdl~~~~~ 749 (784)
.-...+.|++++++..|+.+..+ .|..+++........+...-.....+++..+ +|+.+... +.|...|..++..
T Consensus 477 ~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g~~ 554 (619)
T 3s94_A 477 SLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSAER 554 (619)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETT--EEEEECTTSSCEEEEESSSCCE
T ss_pred CCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCCCce
Confidence 44577899999877777766633 8999998644322222222223345666544 56555543 5677777766643
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.56 E-value=0.0082 Score=62.61 Aligned_cols=225 Identities=12% Similarity=0.037 Sum_probs=114.5
Q ss_pred CCCEEEEEe-CC-----CeEEEEECCCCceeee--cCCCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEcCCCCc--
Q 047260 518 DGKLLASSG-HD-----RKVVLWNMDTLQTEST--PEDHKSVVTDVRFRPNSSQLATASVD-----KSVRLWDAANPN-- 582 (784)
Q Consensus 518 dg~~Lasgs-~D-----g~I~IWd~~t~~~~~~--l~~h~~~It~i~fspdg~~Latgs~D-----g~I~IWdl~~~~-- 582 (784)
++.+++.|+ .+ ..+.+||..+.+-... +.........+. -++.+++.|+.+ ..+.+||+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 445666666 33 3688999887653322 211111222222 256777777765 468899988765
Q ss_pred -ceee-eccCCCCCeEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCeeEEeec--CC-eeEEEEecCCCEEEEEEC
Q 047260 583 -FCSQ-AYTGHSSPIMSLDFHPKKTDLFCFCDND-----NEIQYWSINPFLCTHITK--GG-TAQVRFQPRIGQLLAAAS 652 (784)
Q Consensus 583 -~~~~-~~~~h~~~V~sl~~sp~~~~ll~sgs~d-----g~I~iwDl~~~~~~~~~~--~~-v~~v~fsp~~~~Ll~~s~ 652 (784)
.... .+.........+.+ + ..+++.|+.+ ..+.+||+.+.+-..... .. ....+...++..++.|+.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~--~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL--G-DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCB
T ss_pred eeEECCCCCCCccceeEEEE--C-CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCC
Confidence 3221 11111111222222 3 4467666543 368899987755433221 11 111112225555566554
Q ss_pred C-----CcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEeC------CeEEEEeCCCCceEEEeccCCCc-e
Q 047260 653 D-----KVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVSQ------NLVKVWSMASGECIQELSSNGNQ-F 718 (784)
Q Consensus 653 D-----g~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgsd------d~I~IwDl~t~~~i~~l~~~~~~-I 718 (784)
+ ..+.+||+.+.+-... +.........+.+ ++++++.|+. +.|.+||+.+.+-...-...... -
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 3 5689999987753322 1111111222222 5666666552 36899999887543322111111 1
Q ss_pred EEEEEecCCCEEEEEECC-----CeEEEEECCCCceE
Q 047260 719 HSCVFHPSYSTLLVVGGI-----SSLELWNMAENKSM 750 (784)
Q Consensus 719 ~sl~fspdg~~L~s~s~d-----g~I~Iwdl~~~~~~ 750 (784)
.+++.. ++..++.|+.+ ..|.+||+.+.+-.
T Consensus 247 ~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 247 VGATVL-RGRLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp CEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred eeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 222222 55566666654 36889999887654
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.56 E-value=0.028 Score=60.66 Aligned_cols=222 Identities=14% Similarity=0.103 Sum_probs=126.0
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeec---cCCCCCeEEEEEcCC---CCcEEEEEeC---C----Ce
Q 047260 550 SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAY---TGHSSPIMSLDFHPK---KTDLFCFCDN---D----NE 616 (784)
Q Consensus 550 ~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~---~~h~~~V~sl~~sp~---~~~ll~sgs~---d----g~ 616 (784)
.....|+|.|+++ |+++..+|.|+++|. ++...+..+ .........|+|+|+ +..++++... + ..
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4568899999997 555566799999974 333122111 122346889999997 5556655442 3 56
Q ss_pred EEEEeCCCC-------eeE-Eeec----CCeeEEEEecCCCEEEEEEC-------------CCcEEEEECCCC-------
Q 047260 617 IQYWSINPF-------LCT-HITK----GGTAQVRFQPRIGQLLAAAS-------------DKVVSIFDIETD------- 664 (784)
Q Consensus 617 I~iwDl~~~-------~~~-~~~~----~~v~~v~fsp~~~~Ll~~s~-------------Dg~I~IwDl~t~------- 664 (784)
|..|+.... +.+ ..+. .....+.|.|++..+++.+. .|.|.-+|....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777776543 111 1111 12456899999875555432 145655555421
Q ss_pred --eEEEEEeCCCCCEEEEEEcC-CCCEEEEEeC----CeEEEEeCCC--------C--------ceEEEeccCCCceEEE
Q 047260 665 --RQTHSLQGHAELVNYICWDT-NGDYLASVSQ----NLVKVWSMAS--------G--------ECIQELSSNGNQFHSC 721 (784)
Q Consensus 665 --~~i~~l~~h~~~V~sl~~sp-dg~~Lasgsd----d~I~IwDl~t--------~--------~~i~~l~~~~~~I~sl 721 (784)
..+. -.++. ....++|+| ++.++++-.. +.|.+..... + .++..+.........+
T Consensus 187 ~~~~i~-a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 187 PNSPIW-SYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp TTCCEE-EECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCcEE-EEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 0111 12333 345799999 6776665432 2455443211 0 1233332223456778
Q ss_pred EEe-------cCCCEEEEEECCCeEEEEECCCC-ceE---Eec-ccCCceEEEEEeCCCCEEEEEE
Q 047260 722 VFH-------PSYSTLLVVGGISSLELWNMAEN-KSM---TIA-AHENIISALAQSPVTGMVASAS 775 (784)
Q Consensus 722 ~fs-------pdg~~L~s~s~dg~I~Iwdl~~~-~~~---~~~-~h~~~V~slafspdg~~LaSgs 775 (784)
+|. .++.++++.-..+.|...++... +.. .+. .....+..+++.|||.++++..
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 883 45655555555568888888753 222 222 2246799999999998777664
No 310
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.54 E-value=0.13 Score=56.34 Aligned_cols=233 Identities=13% Similarity=0.194 Sum_probs=155.3
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCC
Q 047260 513 CHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHS 592 (784)
Q Consensus 513 l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~ 592 (784)
.-.+|..+.||.-. ..++.|||+++...+..+.- ...|.-=.|-.+. .|+..+ +..|.-|+++....+.+.+..|.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~ 146 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCG
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecch
Confidence 44677777777654 67899999999888887754 3456666676443 455554 46899999987555666666553
Q ss_pred ----CCeEEEEEcCCCCcEEEEEe------CCCeEEEEeCCCCeeEEeecCCeeEEE-EecCCC----EEEEEE-C---C
Q 047260 593 ----SPIMSLDFHPKKTDLFCFCD------NDNEIQYWSINPFLCTHITKGGTAQVR-FQPRIG----QLLAAA-S---D 653 (784)
Q Consensus 593 ----~~V~sl~~sp~~~~ll~sgs------~dg~I~iwDl~~~~~~~~~~~~v~~v~-fsp~~~----~Ll~~s-~---D 653 (784)
..|..-..+++..+++++|- -.|.+.+|..+.. ....++++..++. +..+++ .+++-. . .
T Consensus 147 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 225 (494)
T 1bpo_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (494)
T ss_dssp GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTC
T ss_pred hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 45777777888888887764 2467888888753 3344455554443 322321 233322 2 3
Q ss_pred CcEEEEECCCC--------eEEEEEe----CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCCceEEEeccCCCceEE
Q 047260 654 KVVSIFDIETD--------RQTHSLQ----GHAELVNYICWDTNGDYLASVS-QNLVKVWSMASGECIQELSSNGNQFHS 720 (784)
Q Consensus 654 g~I~IwDl~t~--------~~i~~l~----~h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~~~i~~l~~~~~~I~s 720 (784)
+.++|.++... +....+. .-.+--.++..++.-.+++..+ .|.|.+||+.++.++..-+.....|..
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~ 305 (494)
T 1bpo_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 305 (494)
T ss_dssp CEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred cEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEE
Confidence 78999998532 1111111 1233445677777666666655 569999999999999988888888877
Q ss_pred EEEecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 721 CVFHPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 721 l~fspdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
.+.+....-++.....|.|.-..+++...+
T Consensus 306 t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 306 TAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp EEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred ecccCCCCcEEEEccCceEEEEEEccccch
Confidence 777777777888888998887777776544
No 311
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.53 E-value=0.0038 Score=66.42 Aligned_cols=150 Identities=5% Similarity=0.062 Sum_probs=105.4
Q ss_pred eeEEEEecCCCEEEEEEC-CCcEEEEECCCCeEEEE-EeC----CC--CCEEEEEE---cCCCCEEEEEe----------
Q 047260 635 TAQVRFQPRIGQLLAAAS-DKVVSIFDIETDRQTHS-LQG----HA--ELVNYICW---DTNGDYLASVS---------- 693 (784)
Q Consensus 635 v~~v~fsp~~~~Ll~~s~-Dg~I~IwDl~t~~~i~~-l~~----h~--~~V~sl~~---spdg~~Lasgs---------- 693 (784)
..+++|++....+++++. .+.|..||...+..... +.+ .. ..+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 356788887778887774 89999999875543322 221 11 13578999 68888887644
Q ss_pred ----CCeEEEEeCC---CCceEEEecc-------------CCCceEEEEEecCCCEEEEEECC-CeEEEEECCCCceEEe
Q 047260 694 ----QNLVKVWSMA---SGECIQELSS-------------NGNQFHSCVFHPSYSTLLVVGGI-SSLELWNMAENKSMTI 752 (784)
Q Consensus 694 ----dd~I~IwDl~---t~~~i~~l~~-------------~~~~I~sl~fspdg~~L~s~s~d-g~I~Iwdl~~~~~~~~ 752 (784)
+..|..||+. +++.+....- .......++..++|+..++++.. +.|..++........+
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 3479999999 7877655531 11247899999999988888888 8888888776543322
Q ss_pred ccc------CCceEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 753 AAH------ENIISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 753 ~~h------~~~V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
... .-..+.|+++|++.+|++...+|.|..+|
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 211 12367999999999888887788887664
No 312
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.50 E-value=0.15 Score=54.04 Aligned_cols=242 Identities=11% Similarity=0.185 Sum_probs=147.4
Q ss_pred CCeEEEEECCCCceeee-cCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCc
Q 047260 528 DRKVVLWNMDTLQTEST-PEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTD 606 (784)
Q Consensus 528 Dg~I~IWd~~t~~~~~~-l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ 606 (784)
+..|.|.|+.+...+.+ .-.- -+.-.+|..+.||.-. ..++.|+|+++... .+.+.- ...|.-=.|-.+..
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~A----dsAIMnP~~~ViALra-g~~LQiFnletK~k-lks~~~-~e~VvfWkWis~~~- 119 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSK-MKAHTM-TDDVTFWKWISLNT- 119 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCC----SEEEECSSSSEEEEEE-TTEEEEEETTTTEE-EEEEEC-SSCEEEEEECSSSE-
T ss_pred CCEEEEEECCCCCCcccccccc----ceeeeCCCccEEEEec-CCeEEEechHHhhh-hcceec-CCccEEEEecCCCe-
Confidence 34799999987554422 2112 2344588888877765 67899999998663 333332 35676667765543
Q ss_pred EEEEEeCCCeEEEEeCCC-CeeEEeec-------CCeeEEEEecCCCEEEEEEC-------CCcEEEEECCCCeEEEEEe
Q 047260 607 LFCFCDNDNEIQYWSINP-FLCTHITK-------GGTAQVRFQPRIGQLLAAAS-------DKVVSIFDIETDRQTHSLQ 671 (784)
Q Consensus 607 ll~sgs~dg~I~iwDl~~-~~~~~~~~-------~~v~~v~fsp~~~~Ll~~s~-------Dg~I~IwDl~t~~~i~~l~ 671 (784)
++... +..|+.|++.. ......+. ..+...+.+++.++++..+- .|.+.+|..+.+ .-..++
T Consensus 120 -L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie 196 (365)
T 2xzh_A 120 -VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 196 (365)
T ss_dssp -EEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEEC
T ss_pred -EEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceee
Confidence 32222 67899999964 22333322 34555667888888776553 377889988755 334566
Q ss_pred CCCCCEEEEEEcCC---CCEEEEEeC----CeEEEEeCCCC--------c-eEEEeccC---CCceEEEEEecCCCEEEE
Q 047260 672 GHAELVNYICWDTN---GDYLASVSQ----NLVKVWSMASG--------E-CIQELSSN---GNQFHSCVFHPSYSTLLV 732 (784)
Q Consensus 672 ~h~~~V~sl~~spd---g~~Lasgsd----d~I~IwDl~t~--------~-~i~~l~~~---~~~I~sl~fspdg~~L~s 732 (784)
+|......+.+..+ ..+++.+.. +.+.|.++... + .+..+... .+-..++..++....++.
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 67655544433221 123443432 38999988432 1 12222222 334567888999999999
Q ss_pred EECCCeEEEEECCCCceEEe-cccCCceEEEEEeCCCCEEEEEECCCcE
Q 047260 733 VGGISSLELWNMAENKSMTI-AAHENIISALAQSPVTGMVASASHDSSV 780 (784)
Q Consensus 733 ~s~dg~I~Iwdl~~~~~~~~-~~h~~~V~slafspdg~~LaSgs~DG~V 780 (784)
.+..|.|++||+.++.++.. .-..+.|-..+.+....=++.....|.|
T Consensus 277 iTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred EeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 99999999999999998833 3334445444444443344444456554
No 313
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.49 E-value=0.022 Score=60.66 Aligned_cols=190 Identities=8% Similarity=0.106 Sum_probs=120.9
Q ss_pred CCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEe-ecC---------CeeEEEE---ecCCCEEEEEEC------
Q 047260 592 SSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHI-TKG---------GTAQVRF---QPRIGQLLAAAS------ 652 (784)
Q Consensus 592 ~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~-~~~---------~v~~v~f---sp~~~~Ll~~s~------ 652 (784)
..-..+++|++....++++.-..+.|..||......... +.. .+..+.| .|++..+++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 334567899987776776666899999999975433222 222 2467889 688555554431
Q ss_pred -------CCcEEEEECC---CCeEEEEEeC-------------CCCCEEEEEEcCCCCEEEEEe-C-CeEEEEeCCCCce
Q 047260 653 -------DKVVSIFDIE---TDRQTHSLQG-------------HAELVNYICWDTNGDYLASVS-Q-NLVKVWSMASGEC 707 (784)
Q Consensus 653 -------Dg~I~IwDl~---t~~~i~~l~~-------------h~~~V~sl~~spdg~~Lasgs-d-d~I~IwDl~t~~~ 707 (784)
+..|..||+. +++.+....- .......++.+++|+..++++ . +.|..++.... .
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-T 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-C
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-E
Confidence 5779999999 7776665541 113478999999999888766 4 56666665433 3
Q ss_pred EEEec--c----CCCceEEEEEecCCCEEEEEECCCeEEEEECCCCce--EEec--cc---CCceEEE-EEeCCCCE-EE
Q 047260 708 IQELS--S----NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKS--MTIA--AH---ENIISAL-AQSPVTGM-VA 772 (784)
Q Consensus 708 i~~l~--~----~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~--~~~~--~h---~~~V~sl-afspdg~~-La 772 (784)
+..+. . .....+.++++|++..|++....+.|..+|+..... +.+. +. -.....| ..-.+|+. |+
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV 250 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLV 250 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEE
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEE
Confidence 33221 1 122367999999999999998899999999885443 3222 21 1123343 33346766 44
Q ss_pred EEECCCcEEE
Q 047260 773 SASHDSSVKL 782 (784)
Q Consensus 773 Sgs~DG~V~I 782 (784)
+.+..+.+.+
T Consensus 251 ~~~~~~~~~l 260 (334)
T 2p9w_A 251 GARAPYAISF 260 (334)
T ss_dssp EEETTEEEEE
T ss_pred EcCCCCEEEE
Confidence 4444554443
No 314
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.39 E-value=0.028 Score=60.67 Aligned_cols=227 Identities=7% Similarity=0.060 Sum_probs=123.6
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcce--ee----eccCCCCCeEEEEEcCC---CCcEEEEEeC-------C
Q 047260 551 VVTDVRFRPNSSQLATASVDKSVRLWDAANPNFC--SQ----AYTGHSSPIMSLDFHPK---KTDLFCFCDN-------D 614 (784)
Q Consensus 551 ~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~--~~----~~~~h~~~V~sl~~sp~---~~~ll~sgs~-------d 614 (784)
....|+|.|+++.|+++...|.|++++... ... +. ...........|+|+|+ +..++++-.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 467899999998444556789999998542 211 11 11122345789999996 5556555433 2
Q ss_pred CeEEEEeCCCC-------eeE-Eeec------CCeeEEEEecCCCEEEEEEC-------------CCcEEEEECCCCe--
Q 047260 615 NEIQYWSINPF-------LCT-HITK------GGTAQVRFQPRIGQLLAAAS-------------DKVVSIFDIETDR-- 665 (784)
Q Consensus 615 g~I~iwDl~~~-------~~~-~~~~------~~v~~v~fsp~~~~Ll~~s~-------------Dg~I~IwDl~t~~-- 665 (784)
..|..|++... +.+ .... .....+.|.|++..+++.+. .|.|.-+|....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666666432 111 1111 11356999999854444332 1457667765320
Q ss_pred ----------EEEEE-eCCCCCEEEEEEcC-CCCEEEEEeC----CeEEEEeCC--------CC----------------
Q 047260 666 ----------QTHSL-QGHAELVNYICWDT-NGDYLASVSQ----NLVKVWSMA--------SG---------------- 705 (784)
Q Consensus 666 ----------~i~~l-~~h~~~V~sl~~sp-dg~~Lasgsd----d~I~IwDl~--------t~---------------- 705 (784)
....+ .++ .....++|+| +|.++++-.. +.|.+.... .+
T Consensus 178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 11111 122 3467899999 6666555332 134332110 00
Q ss_pred -----ceEEEeccCCCceEEEEEec-------CCCEEEEEECCCeEEEEECCCCceE---Eec-ccCCceEEEEEeCCCC
Q 047260 706 -----ECIQELSSNGNQFHSCVFHP-------SYSTLLVVGGISSLELWNMAENKSM---TIA-AHENIISALAQSPVTG 769 (784)
Q Consensus 706 -----~~i~~l~~~~~~I~sl~fsp-------dg~~L~s~s~dg~I~Iwdl~~~~~~---~~~-~h~~~V~slafspdg~ 769 (784)
.++..+..+ ..+..++|.. ++.++++.-..+.|...++..++.. .+. .....+..|++.|||.
T Consensus 257 ~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 257 VAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 111222222 3456777764 3555555555678888888765433 222 2345799999999998
Q ss_pred EEEEEE-CCCcE
Q 047260 770 MVASAS-HDSSV 780 (784)
Q Consensus 770 ~LaSgs-~DG~V 780 (784)
++++.. .+|.|
T Consensus 336 lyv~td~~~g~I 347 (353)
T 2g8s_A 336 LYVLTDESSGEL 347 (353)
T ss_dssp EEEEECSTTEEE
T ss_pred EEEEEeCCCCEE
Confidence 766543 35544
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.35 E-value=0.072 Score=57.38 Aligned_cols=224 Identities=10% Similarity=0.037 Sum_probs=122.1
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee---eec----CCCCCCeEEEEEccC---CCEEEEEe-C------
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTE---STP----EDHKSVVTDVRFRPN---SSQLATAS-V------ 569 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~---~~l----~~h~~~It~i~fspd---g~~Latgs-~------ 569 (784)
-...+.|+|.|+|++|+++...|.|++++.+ +... ..+ .........|+|+|+ +..|+.+. .
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3457899999999934445678999999854 3221 111 122346789999995 45555443 2
Q ss_pred -CCeEEEEcCCCCc-------ceeeecc---CCCCCeEEEEEcCCCCcEEEEEeC-------------CCeEEEEeCCCC
Q 047260 570 -DKSVRLWDAANPN-------FCSQAYT---GHSSPIMSLDFHPKKTDLFCFCDN-------------DNEIQYWSINPF 625 (784)
Q Consensus 570 -Dg~I~IWdl~~~~-------~~~~~~~---~h~~~V~sl~~sp~~~~ll~sgs~-------------dg~I~iwDl~~~ 625 (784)
...|..|++.... .+...+. ........|.|.|++. ++++.+. .|.|.-++.+..
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 2346666654321 0111111 1111245799999985 5544432 246766666532
Q ss_pred --------------eeEEee-cCCeeEEEEecCCCEEEEEECCC--cEEEEECCCC------------------------
Q 047260 626 --------------LCTHIT-KGGTAQVRFQPRIGQLLAAASDK--VVSIFDIETD------------------------ 664 (784)
Q Consensus 626 --------------~~~~~~-~~~v~~v~fsp~~~~Ll~~s~Dg--~I~IwDl~t~------------------------ 664 (784)
..+... ......++|+|....|+++.... .=.|.-+..+
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 111111 13456789999656666665431 1122211111
Q ss_pred -------eEEEEEeCCCCCEEEEEEcC-------CCCEEEEEeCC-eEEEEeCCCCceEEE--e-ccCCCceEEEEEecC
Q 047260 665 -------RQTHSLQGHAELVNYICWDT-------NGDYLASVSQN-LVKVWSMASGECIQE--L-SSNGNQFHSCVFHPS 726 (784)
Q Consensus 665 -------~~i~~l~~h~~~V~sl~~sp-------dg~~Lasgsdd-~I~IwDl~t~~~i~~--l-~~~~~~I~sl~fspd 726 (784)
.++..+. +......+.|.. +|.++++.-.+ .|...++..++.+.. + ......+..+++.|+
T Consensus 255 ~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 255 EIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp SSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred CCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 1112222 233566777764 46666655444 888888776654332 2 222357899999999
Q ss_pred CCEEEEE
Q 047260 727 YSTLLVV 733 (784)
Q Consensus 727 g~~L~s~ 733 (784)
|..+++.
T Consensus 334 G~lyv~t 340 (353)
T 2g8s_A 334 GYLYVLT 340 (353)
T ss_dssp SCEEEEE
T ss_pred CcEEEEE
Confidence 9854443
No 316
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.34 E-value=0.28 Score=53.80 Aligned_cols=243 Identities=11% Similarity=0.164 Sum_probs=149.0
Q ss_pred CCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcE
Q 047260 528 DRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDL 607 (784)
Q Consensus 528 Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~l 607 (784)
+..|.|.|+.+...+.+-.- ..-+.-.+|..+.||.-. ..++.|+|+++... .+.+.- ...|.-=.|-.+..
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~k-lks~~~-~e~VvfWkWis~~~-- 118 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSK-MKAHTM-TDDVTFWKWISLNT-- 118 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEE-EEEEEC-SSCCCEEEEEETTE--
T ss_pred CCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhh-hcceec-CCCceEEEecCCCe--
Confidence 44799999987554432211 112345678777777765 68999999998663 333332 23455556654443
Q ss_pred EEEEeCCCeEEEEeCCC-CeeEEeec-------CCeeEEEEecCCCEEEEEEC-------CCcEEEEECCCCeEEEEEeC
Q 047260 608 FCFCDNDNEIQYWSINP-FLCTHITK-------GGTAQVRFQPRIGQLLAAAS-------DKVVSIFDIETDRQTHSLQG 672 (784)
Q Consensus 608 l~sgs~dg~I~iwDl~~-~~~~~~~~-------~~v~~v~fsp~~~~Ll~~s~-------Dg~I~IwDl~t~~~i~~l~~ 672 (784)
++..+ +..|+.|++.. ......+. ..|.....+++.++++..+- .|.+.+|..+.+. -..+++
T Consensus 119 l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieG 196 (494)
T 1bpo_A 119 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEG 196 (494)
T ss_dssp EEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECC
T ss_pred EEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchhee
Confidence 33222 77899999963 22233322 34556667888888776553 4778899887543 345677
Q ss_pred CCCCEEEEEEcCCC---CEEEEEeC----CeEEEEeCCCC--------ceEEEec-c---CCCceEEEEEecCCCEEEEE
Q 047260 673 HAELVNYICWDTNG---DYLASVSQ----NLVKVWSMASG--------ECIQELS-S---NGNQFHSCVFHPSYSTLLVV 733 (784)
Q Consensus 673 h~~~V~sl~~spdg---~~Lasgsd----d~I~IwDl~t~--------~~i~~l~-~---~~~~I~sl~fspdg~~L~s~ 733 (784)
|......+.+..+. .+++.+.. +.+.|.++... +....+. . ..+-..++.+++....++..
T Consensus 197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyvi 276 (494)
T 1bpo_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI 276 (494)
T ss_dssp SEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEE
Confidence 76665555443221 24444443 48999998542 1111211 1 13345678899999999999
Q ss_pred ECCCeEEEEECCCCceEEe-cccCCceEEEEEeCCCCEEEEEECCCcE
Q 047260 734 GGISSLELWNMAENKSMTI-AAHENIISALAQSPVTGMVASASHDSSV 780 (784)
Q Consensus 734 s~dg~I~Iwdl~~~~~~~~-~~h~~~V~slafspdg~~LaSgs~DG~V 780 (784)
+..|.|++||+.++.++.. .-..+.|...+......=++.....|.|
T Consensus 277 TK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 277 TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred ecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceE
Confidence 9999999999999998833 3344455544444444445555566654
No 317
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.31 E-value=0.14 Score=54.98 Aligned_cols=234 Identities=10% Similarity=0.025 Sum_probs=126.8
Q ss_pred eEEeEeecCCCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee--eec----CCCCCCeEEEEEccC---CCEEEEE-
Q 047260 498 CEVGCIRSRNSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTE--STP----EDHKSVVTDVRFRPN---SSQLATA- 567 (784)
Q Consensus 498 ~~i~~l~~H~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~--~~l----~~h~~~It~i~fspd---g~~Latg- 567 (784)
.++..+...-...+.|+|.|||++|++--..|.|++++..+++.. ..+ .........|+|+|+ +..|+..
T Consensus 22 ~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 22 KVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred ceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 345555556667899999999997776655899999987655432 212 223567899999995 3445443
Q ss_pred e--CCCeEEEEcCCCC----------cceeeecc-CCCCCeEEEEEcCCCCcEEEEEeC-------------CCeEEEEe
Q 047260 568 S--VDKSVRLWDAANP----------NFCSQAYT-GHSSPIMSLDFHPKKTDLFCFCDN-------------DNEIQYWS 621 (784)
Q Consensus 568 s--~Dg~I~IWdl~~~----------~~~~~~~~-~h~~~V~sl~~sp~~~~ll~sgs~-------------dg~I~iwD 621 (784)
+ .+..|.-|.+... +.+...+. ........|.|.|++. |+++.+. .|.|.-++
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~ 180 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMT 180 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEEC
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEe
Confidence 2 3455665655431 11111111 1112346799999986 5444331 34555555
Q ss_pred CCCC---------eeEEee-cCCeeEEEEecCCCEEEEEEC--CCcEEEEECCCCe------------------EEEEEe
Q 047260 622 INPF---------LCTHIT-KGGTAQVRFQPRIGQLLAAAS--DKVVSIFDIETDR------------------QTHSLQ 671 (784)
Q Consensus 622 l~~~---------~~~~~~-~~~v~~v~fsp~~~~Ll~~s~--Dg~I~IwDl~t~~------------------~i~~l~ 671 (784)
.+.. ..+... ......++|+|++. |+++.. ++.-.|.-+..+. ++..+.
T Consensus 181 ~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~ 259 (347)
T 3das_A 181 PDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS 259 (347)
T ss_dssp TTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC
T ss_pred CCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC
Confidence 5422 111111 12356788999754 555443 3322222222221 122232
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCc----eEEEeccCCCceEEEEEecCCCEEEEEE
Q 047260 672 GHAELVNYICWDTNGDYLASVSQN-LVKVWSMASGE----CIQELSSNGNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 672 ~h~~~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~----~i~~l~~~~~~I~sl~fspdg~~L~s~s 734 (784)
.+......++|. +|.+++..-.+ .|....+.... ....+......+..++..|||..+++..
T Consensus 260 ~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 260 TDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp TTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 222345666665 35555554444 66555665442 2223334446789999999987555543
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.27 E-value=0.19 Score=53.94 Aligned_cols=225 Identities=10% Similarity=0.071 Sum_probs=125.4
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcce-ee----eccCCCCCeEEEEEcCC---CCcEEEEE--eCCCeE
Q 047260 548 HKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFC-SQ----AYTGHSSPIMSLDFHPK---KTDLFCFC--DNDNEI 617 (784)
Q Consensus 548 h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~-~~----~~~~h~~~V~sl~~sp~---~~~ll~sg--s~dg~I 617 (784)
.-...+.|+|.|+++++++--..|.|++++..++... +. .+.........|+|+|+ +..++++- ..++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3456789999999987777655899999987654421 11 11223456889999996 34444432 234566
Q ss_pred EEEeCCC----------CeeEE-eec----CCeeEEEEecCCCEEEEEEC-------------CCcEEEEECCCC-----
Q 047260 618 QYWSINP----------FLCTH-ITK----GGTAQVRFQPRIGQLLAAAS-------------DKVVSIFDIETD----- 664 (784)
Q Consensus 618 ~iwDl~~----------~~~~~-~~~----~~v~~v~fsp~~~~Ll~~s~-------------Dg~I~IwDl~t~----- 664 (784)
.-|.+.. .+.+. .+. .....+.|.|++..+++.+. .|.|.-++....
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 6665543 11111 121 12356899999876666542 255555555422
Q ss_pred ----eEEEEEeCCCCCEEEEEEcCCCCEEEEEe--CC--eEEEEeCC--------CC--------ceEEEeccCCCceEE
Q 047260 665 ----RQTHSLQGHAELVNYICWDTNGDYLASVS--QN--LVKVWSMA--------SG--------ECIQELSSNGNQFHS 720 (784)
Q Consensus 665 ----~~i~~l~~h~~~V~sl~~spdg~~Lasgs--dd--~I~IwDl~--------t~--------~~i~~l~~~~~~I~s 720 (784)
..+. -.+|. ....++|+|+|.++++-. +. .|.+..-. .+ .++..+..+......
T Consensus 190 Pf~~~~i~-a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G 267 (347)
T 3das_A 190 PFPGSPVY-SYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSG 267 (347)
T ss_dssp SSTTCCEE-EBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEE
T ss_pred CCCCCeEE-eeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcc
Confidence 1111 12343 345789999988766543 21 44443211 01 122333322234566
Q ss_pred EEEecCCCEEEEEECCCeEEEEECCCCce----E-EecccCCceEEEEEeCCCCEEEEEE
Q 047260 721 CVFHPSYSTLLVVGGISSLELWNMAENKS----M-TIAAHENIISALAQSPVTGMVASAS 775 (784)
Q Consensus 721 l~fspdg~~L~s~s~dg~I~Iwdl~~~~~----~-~~~~h~~~V~slafspdg~~LaSgs 775 (784)
++|.. +..++..-..+.|....+..... . .+.+..+++.+|+..|||.++++.+
T Consensus 268 ~~~~~-g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 268 IAYAE-GSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEET-TEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred eEEEc-CceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 77763 44344333445676666655432 1 2334457899999999998776654
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.25 E-value=0.023 Score=59.25 Aligned_cols=225 Identities=13% Similarity=0.088 Sum_probs=112.3
Q ss_pred CCEEEEEeCC----CeEEEEECCCCceeee--cCCCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEcCCCCcceeee
Q 047260 519 GKLLASSGHD----RKVVLWNMDTLQTEST--PEDHKSVVTDVRFRPNSSQLATASVD-----KSVRLWDAANPNFCSQA 587 (784)
Q Consensus 519 g~~Lasgs~D----g~I~IWd~~t~~~~~~--l~~h~~~It~i~fspdg~~Latgs~D-----g~I~IWdl~~~~~~~~~ 587 (784)
+.+++.|+.+ ..+.+||+.+.+-... +......-..+.+ ++.+++.|+.+ ..+.+||..+.......
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 3455556543 3588899887553322 1111111122222 66677777754 35888998876532211
Q ss_pred -ccCCCCCeEEEEEcCCCCcEEEEEeCCC-----eEEEEeCCCCeeEEeec--CCe--eEEEEecCCCEEEEEEC-----
Q 047260 588 -YTGHSSPIMSLDFHPKKTDLFCFCDNDN-----EIQYWSINPFLCTHITK--GGT--AQVRFQPRIGQLLAAAS----- 652 (784)
Q Consensus 588 -~~~h~~~V~sl~~sp~~~~ll~sgs~dg-----~I~iwDl~~~~~~~~~~--~~v--~~v~fsp~~~~Ll~~s~----- 652 (784)
+.........+.+ + ..+++.|+.++ .+.+||+.+.+-..... .+. ..++. -++..++.|+.
T Consensus 94 ~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 94 NMRDRRSTLGAAVL--N-GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASR 169 (302)
T ss_dssp CCSSCCBSCEEEEE--T-TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTT
T ss_pred CCCccccceEEEEE--C-CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCC
Confidence 1111111222222 3 34666666443 57788887765443322 111 12222 24445555543
Q ss_pred --CCcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEeC------CeEEEEeCCCCceEEEeccCCCc-eEEE
Q 047260 653 --DKVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVSQ------NLVKVWSMASGECIQELSSNGNQ-FHSC 721 (784)
Q Consensus 653 --Dg~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgsd------d~I~IwDl~t~~~i~~l~~~~~~-I~sl 721 (784)
-..+.+||+.+.+-... +.........+.+ ++++++.|+. +.+.+||+.+.+-...-...... -..+
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV 247 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred ccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeE
Confidence 24588999987643322 1111112222222 5666666542 36899999886543221111111 1222
Q ss_pred EEecCCCEEEEEECCC-----eEEEEECCCCceEEe
Q 047260 722 VFHPSYSTLLVVGGIS-----SLELWNMAENKSMTI 752 (784)
Q Consensus 722 ~fspdg~~L~s~s~dg-----~I~Iwdl~~~~~~~~ 752 (784)
+. -++..++.|+.++ .|.+||+.+++-..+
T Consensus 248 ~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 282 (302)
T 2xn4_A 248 CA-VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVV 282 (302)
T ss_dssp EE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred EE-ECCEEEEECCcCCCcccccEEEEcCCCCeEEEC
Confidence 22 2556666666543 589999988765543
No 320
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.23 E-value=0.043 Score=57.26 Aligned_cols=220 Identities=9% Similarity=0.059 Sum_probs=113.3
Q ss_pred EEEEEeC--CCeEEEEECCCCceeee--cCCCCCCeEEEEEccCCCEEEEEeCC----CeEEEEcCCCCcceeee-ccCC
Q 047260 521 LLASSGH--DRKVVLWNMDTLQTEST--PEDHKSVVTDVRFRPNSSQLATASVD----KSVRLWDAANPNFCSQA-YTGH 591 (784)
Q Consensus 521 ~Lasgs~--Dg~I~IWd~~t~~~~~~--l~~h~~~It~i~fspdg~~Latgs~D----g~I~IWdl~~~~~~~~~-~~~h 591 (784)
+++.|+. ...+.+||..+.+-... +.........+.+ ++.+++.|+.+ ..+.+||+.+....... +...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 4555654 35689999887553322 2211222222332 66677777755 67889998876532211 1111
Q ss_pred CCCeEEEEEcCCCCcEEEEEeCC------CeEEEEeCCCCeeEEeecC--C--eeEEEEecCCCEEEEEEC---------
Q 047260 592 SSPIMSLDFHPKKTDLFCFCDND------NEIQYWSINPFLCTHITKG--G--TAQVRFQPRIGQLLAAAS--------- 652 (784)
Q Consensus 592 ~~~V~sl~~sp~~~~ll~sgs~d------g~I~iwDl~~~~~~~~~~~--~--v~~v~fsp~~~~Ll~~s~--------- 652 (784)
......+.+ +..+++.|+.+ ..+.+||+.+..-...... + ...++. -++..++.|+.
T Consensus 92 r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 92 RDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEE
T ss_pred ccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccc
Confidence 111222222 33477777654 4688999887654433221 1 112222 24455555543
Q ss_pred CCcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEeC------CeEEEEeCCCCceEE--EeccCCCceEEEE
Q 047260 653 DKVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVSQ------NLVKVWSMASGECIQ--ELSSNGNQFHSCV 722 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgsd------d~I~IwDl~t~~~i~--~l~~~~~~I~sl~ 722 (784)
-..+.+||+.+.+-... +.........+.+ ++++++.|+. +.+.+||+.+.+-.. .+.........+.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 34588999988743322 1111111122222 5666666541 368999998764322 1221112222223
Q ss_pred EecCCCEEEEEECC-----CeEEEEECCCCceE
Q 047260 723 FHPSYSTLLVVGGI-----SSLELWNMAENKSM 750 (784)
Q Consensus 723 fspdg~~L~s~s~d-----g~I~Iwdl~~~~~~ 750 (784)
+ ++..++.|+.+ ..|.+||+.+.+-.
T Consensus 246 ~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 246 V--GSIVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp E--TTEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred E--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 3 55666677644 47899999887654
No 321
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.22 E-value=0.018 Score=62.20 Aligned_cols=191 Identities=9% Similarity=0.078 Sum_probs=109.3
Q ss_pred CeEEEEEccCCCEEEEE------------eCCCeEEEEcCCCC--cceeeeccC-----CCCCeEEEEEcC--CCC-cEE
Q 047260 551 VVTDVRFRPNSSQLATA------------SVDKSVRLWDAANP--NFCSQAYTG-----HSSPIMSLDFHP--KKT-DLF 608 (784)
Q Consensus 551 ~It~i~fspdg~~Latg------------s~Dg~I~IWdl~~~--~~~~~~~~~-----h~~~V~sl~~sp--~~~-~ll 608 (784)
...+|...++|..++++ ..+|.|.++|.++. +.....+.+ ..-....|.+.+ ++. +++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34455566665443333 26899999998743 211112222 223567777766 344 344
Q ss_pred EEEeC--CCeEEEEeCCC--Cee--EEeec----CCeeEEEEecCCCEEEEEEC-----------------CCcEEEEEC
Q 047260 609 CFCDN--DNEIQYWSINP--FLC--THITK----GGTAQVRFQPRIGQLLAAAS-----------------DKVVSIFDI 661 (784)
Q Consensus 609 ~sgs~--dg~I~iwDl~~--~~~--~~~~~----~~v~~v~fsp~~~~Ll~~s~-----------------Dg~I~IwDl 661 (784)
++-.. +..|.+|+++. ... +.... ...+.+.+.++|..+++... .|.|..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 44433 46777777654 222 22222 34678999999876655431 245655655
Q ss_pred CCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEe--CCeEEEEeCCC-Cce--EEEeccCCCceEEEEEec-CCCEEEEEEC
Q 047260 662 ETDRQTHSLQGHAELVNYICWDTNGDYLASVS--QNLVKVWSMAS-GEC--IQELSSNGNQFHSCVFHP-SYSTLLVVGG 735 (784)
Q Consensus 662 ~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgs--dd~I~IwDl~t-~~~--i~~l~~~~~~I~sl~fsp-dg~~L~s~s~ 735 (784)
. + +..+...-..-+.++|+||++.|+.+. .+.|..|++.. ++. ...+ ........+++.+ +|.+.+++..
T Consensus 211 ~--~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 211 N--D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp T--C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEES
T ss_pred C--e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecC
Confidence 3 2 222222334578899999999888876 34999999863 322 2233 2245667889999 5887666654
Q ss_pred CC-eEEEEECC
Q 047260 736 IS-SLELWNMA 745 (784)
Q Consensus 736 dg-~I~Iwdl~ 745 (784)
++ .|..|+..
T Consensus 287 ~g~~v~~~~P~ 297 (355)
T 3sre_A 287 NGMRIFFYDAE 297 (355)
T ss_dssp CHHHHHSCCTT
T ss_pred CceEEEEECCC
Confidence 42 44444433
No 322
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.04 E-value=0.03 Score=59.16 Aligned_cols=195 Identities=7% Similarity=0.025 Sum_probs=114.6
Q ss_pred cCCCEEEEEeC--CCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCC-------------CeEEEEeCC
Q 047260 559 PNSSQLATASV--DKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDND-------------NEIQYWSIN 623 (784)
Q Consensus 559 pdg~~Latgs~--Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~d-------------g~I~iwDl~ 623 (784)
.++..|+.... ++.|...+.+... ..+ +.. -.+--+++++..+..+...+ ..|+..+++
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~-l~~----~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHK-LSN----DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEE-EEE----EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEE-ccC----CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 45666666542 4555555554332 222 221 12345577888777776654 468888887
Q ss_pred CCeeEEeecCCeeEEEEecCCCEEEEEE----CCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCC--eE
Q 047260 624 PFLCTHITKGGTAQVRFQPRIGQLLAAA----SDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQN--LV 697 (784)
Q Consensus 624 ~~~~~~~~~~~v~~v~fsp~~~~Ll~~s----~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd--~I 697 (784)
............ ..|+++++.|+... ....|+..++.... ...+..+.. ..|+++++.|+-.+++ .|
T Consensus 97 g~~~~~l~~~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 97 GHGSTVLDPDPC--IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp SCCCEEEECSCE--EEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCE
T ss_pred CCcceEeecCCc--cEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceE
Confidence 765544444433 36778889988876 24567777776433 333433332 3467788888877653 89
Q ss_pred EEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCC--eEEEEECCCCceEEecccCCceEEEEEeCCCCEEEEE
Q 047260 698 KVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGIS--SLELWNMAENKSMTIAAHENIISALAQSPVTGMVASA 774 (784)
Q Consensus 698 ~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg--~I~Iwdl~~~~~~~~~~h~~~V~slafspdg~~LaSg 774 (784)
.+.++..+.....+.+ ... ..++|++.+|+.....+ .|..-++.......+... .+ ..|+|++.+|+.+
T Consensus 170 y~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~--~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 170 YRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEA--NI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp EEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCS--CE--EEEEEETTEEEEE
T ss_pred EEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCC--Cc--ceEEECCCEEEEE
Confidence 9999877654433332 222 34669999988877553 677777777665544322 22 2255555555544
No 323
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.02 E-value=0.13 Score=54.13 Aligned_cols=176 Identities=4% Similarity=-0.040 Sum_probs=107.4
Q ss_pred EEEcCCCCEEEEEeCC--------------CeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEe--CCC--eEE
Q 047260 513 CHFSSDGKLLASSGHD--------------RKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATAS--VDK--SVR 574 (784)
Q Consensus 513 l~fspdg~~Lasgs~D--------------g~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs--~Dg--~I~ 574 (784)
--|+++|++|+.+... ..|+..+++..+...... .. +..|++++++|+-.. .++ .|.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---DP--CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---SC--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---CC--ccEEEEeCCEEEEEeecCCCCceEE
Confidence 4557888888776543 467888887655333221 11 236777888888776 334 455
Q ss_pred EEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCeeEEEEecCCCEEEEEECC-
Q 047260 575 LWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTAQVRFQPRIGQLLAAASD- 653 (784)
Q Consensus 575 IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~~~Ll~~s~D- 653 (784)
.-+++... ...+..+.. ..|++++..++.+......|.+.+++.......+.+... ..+.|++++|+....+
T Consensus 133 ~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~-~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 133 RIRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCY-KPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp EEETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEE-EEEEEETTEEEEEEGGG
T ss_pred EEECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCcc-ceeeecCCEEEEEEcCC
Confidence 55555332 223333322 345677887777766578899999987766555555443 3466999998887754
Q ss_pred -CcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC---CeEEEEeCCCC
Q 047260 654 -KVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ---NLVKVWSMASG 705 (784)
Q Consensus 654 -g~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd---d~I~IwDl~t~ 705 (784)
..|..-++.... ...+. ...+ ..|+|++..|+-+.+ +.|..-++...
T Consensus 206 ~~~I~~~~ldG~~-~~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 206 DNAIVHVNINNPN-PVVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp TTEEEEECSSSCC-CEECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred CcEEEEEECCCCC-eEEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 367777776544 23332 2233 347788888876643 26777776543
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.95 E-value=0.045 Score=57.31 Aligned_cols=225 Identities=8% Similarity=-0.014 Sum_probs=113.1
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCceeee--cCCCCCCeEEEEEccCCCEEEEEeC----C-----CeEEEEcCCCCc
Q 047260 518 DGKLLASSGHD----RKVVLWNMDTLQTEST--PEDHKSVVTDVRFRPNSSQLATASV----D-----KSVRLWDAANPN 582 (784)
Q Consensus 518 dg~~Lasgs~D----g~I~IWd~~t~~~~~~--l~~h~~~It~i~fspdg~~Latgs~----D-----g~I~IWdl~~~~ 582 (784)
++.+++.|+.+ ..+.+||..+.+-... +......-..+.+ ++.+++.|+. + ..+.+||+.+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 56677777642 3589999887553322 1111111122222 5667777765 2 358889988765
Q ss_pred ceeee-ccCCCCCeEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCeeEEeecC--C--eeEEEEecCCCEEEEEEC
Q 047260 583 FCSQA-YTGHSSPIMSLDFHPKKTDLFCFCDND-----NEIQYWSINPFLCTHITKG--G--TAQVRFQPRIGQLLAAAS 652 (784)
Q Consensus 583 ~~~~~-~~~h~~~V~sl~~sp~~~~ll~sgs~d-----g~I~iwDl~~~~~~~~~~~--~--v~~v~fsp~~~~Ll~~s~ 652 (784)
..... +.........+.+ + ..+++.|+.+ ..+.+||+.+.+-...... . ...++.. ++..++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--D-GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--T-TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEEE--C-CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCC
Confidence 32211 1111111222222 3 3466666533 4688899887654433221 1 1122222 4455555554
Q ss_pred C-----CcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEe-C-----CeEEEEeCCCCceEEEeccCCC-ce
Q 047260 653 D-----KVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVS-Q-----NLVKVWSMASGECIQELSSNGN-QF 718 (784)
Q Consensus 653 D-----g~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgs-d-----d~I~IwDl~t~~~i~~l~~~~~-~I 718 (784)
+ ..+.+||+.+.+-... +.........+.+ ++++++.|+ + +.+.+||+.+.+-...-..... .-
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 255 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA 255 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc
Confidence 3 5689999987643221 1111112222333 566666654 2 3689999988653322111111 11
Q ss_pred EEEEEecCCCEEEEEECC-----CeEEEEECCCCceEE
Q 047260 719 HSCVFHPSYSTLLVVGGI-----SSLELWNMAENKSMT 751 (784)
Q Consensus 719 ~sl~fspdg~~L~s~s~d-----g~I~Iwdl~~~~~~~ 751 (784)
.+++.. ++..++.|+.+ ..|.+||+.+.+-..
T Consensus 256 ~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 256 LGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp CEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred eEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 223332 55566666643 368899988876543
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.90 E-value=0.078 Score=55.23 Aligned_cols=208 Identities=10% Similarity=0.055 Sum_probs=104.4
Q ss_pred CEEEEEeC--CCeEEEEcCCCCcceeee-ccCCCCCeEEEEEcCCCCcEEEEEeCC----CeEEEEeCCCCeeEEeec--
Q 047260 562 SQLATASV--DKSVRLWDAANPNFCSQA-YTGHSSPIMSLDFHPKKTDLFCFCDND----NEIQYWSINPFLCTHITK-- 632 (784)
Q Consensus 562 ~~Latgs~--Dg~I~IWdl~~~~~~~~~-~~~h~~~V~sl~~sp~~~~ll~sgs~d----g~I~iwDl~~~~~~~~~~-- 632 (784)
.+++.|+. ...+.+||..+.+..... ..........+.+ +..+++.|+.+ ..+.+||+.+.+-.....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 34555654 357889998876532211 1111111222222 33477777654 678899988765443322
Q ss_pred CC-eeEEEEecCCCEEEEEECC------CcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEe----------
Q 047260 633 GG-TAQVRFQPRIGQLLAAASD------KVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVS---------- 693 (784)
Q Consensus 633 ~~-v~~v~fsp~~~~Ll~~s~D------g~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgs---------- 693 (784)
.. .......-++..++.|+.+ ..+.+||..+.+-... +.........+. -++++++.|+
T Consensus 90 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 90 TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEE
T ss_pred ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccc
Confidence 11 1111112245556666644 5689999988753322 111111112222 2556666554
Q ss_pred CCeEEEEeCCCCceEEEeccCCC-ceEEEEEecCCCEEEEEECC-----CeEEEEECCCCceEEeccc---CCceEEEEE
Q 047260 694 QNLVKVWSMASGECIQELSSNGN-QFHSCVFHPSYSTLLVVGGI-----SSLELWNMAENKSMTIAAH---ENIISALAQ 764 (784)
Q Consensus 694 dd~I~IwDl~t~~~i~~l~~~~~-~I~sl~fspdg~~L~s~s~d-----g~I~Iwdl~~~~~~~~~~h---~~~V~slaf 764 (784)
.+.+.+||+.+.+-...-..... .-.+++.. ++..++.|+.+ ..+.+||+.+.+-..+... .....++.+
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV 246 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE
Confidence 23588999988753322111111 11223333 55555555543 3689999988765543221 111222222
Q ss_pred eCCCCEEEEEECC
Q 047260 765 SPVTGMVASASHD 777 (784)
Q Consensus 765 spdg~~LaSgs~D 777 (784)
++.+++.|+.+
T Consensus 247 --~~~i~v~GG~~ 257 (306)
T 3ii7_A 247 --GSIVYVLAGFQ 257 (306)
T ss_dssp --TTEEEEEECBC
T ss_pred --CCEEEEEeCcC
Confidence 56777888755
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.87 E-value=0.046 Score=56.82 Aligned_cols=212 Identities=13% Similarity=0.074 Sum_probs=104.1
Q ss_pred CCCEEEEEe-CC-----CeEEEEcCCCCcceeee-ccCCCCCeEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCe-
Q 047260 560 NSSQLATAS-VD-----KSVRLWDAANPNFCSQA-YTGHSSPIMSLDFHPKKTDLFCFCDND-----NEIQYWSINPFL- 626 (784)
Q Consensus 560 dg~~Latgs-~D-----g~I~IWdl~~~~~~~~~-~~~h~~~V~sl~~sp~~~~ll~sgs~d-----g~I~iwDl~~~~- 626 (784)
++.+++.|+ .+ ..+.+||+.+.+..... +.........+.+ +..+++.|+.+ ..+.+||+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL---HDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE---CCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 344566665 22 36888888875532211 1111111222222 23477777654 468899987655
Q ss_pred --eEEeec--CC--eeEEEEecCCCEEEEEECC-----CcEEEEECCCCeEEE--EEeCCCCCEEEEEEcCCCCEEEEEe
Q 047260 627 --CTHITK--GG--TAQVRFQPRIGQLLAAASD-----KVVSIFDIETDRQTH--SLQGHAELVNYICWDTNGDYLASVS 693 (784)
Q Consensus 627 --~~~~~~--~~--v~~v~fsp~~~~Ll~~s~D-----g~I~IwDl~t~~~i~--~l~~h~~~V~sl~~spdg~~Lasgs 693 (784)
-..... .. ...++. .++..++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++++++.|+
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 167 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGG 167 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred CeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence 332221 11 112222 244555555543 468899988765332 22211112222222 566666654
Q ss_pred -C-----CeEEEEeCCCCceEEEeccCCCc-eEEEEEecCCCEEEEEECC-----CeEEEEECCCCceEEecccC-CceE
Q 047260 694 -Q-----NLVKVWSMASGECIQELSSNGNQ-FHSCVFHPSYSTLLVVGGI-----SSLELWNMAENKSMTIAAHE-NIIS 760 (784)
Q Consensus 694 -d-----d~I~IwDl~t~~~i~~l~~~~~~-I~sl~fspdg~~L~s~s~d-----g~I~Iwdl~~~~~~~~~~h~-~~V~ 760 (784)
+ +.+.+||+.+.+-...-...... -.+++.. ++..++.|+.+ ..|.+||+.+.+-..+.... ....
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 2 36899999887543321111111 1222222 45556666654 46999999988765443211 1111
Q ss_pred EEEEeCCCCEEEEEECCC
Q 047260 761 ALAQSPVTGMVASASHDS 778 (784)
Q Consensus 761 slafspdg~~LaSgs~DG 778 (784)
..++.-++++++.|+.++
T Consensus 247 ~~~~~~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 247 VGATVLRGRLYAIAGYDG 264 (301)
T ss_dssp CEEEEETTEEEEECCBCS
T ss_pred eeEEEECCEEEEEcCcCC
Confidence 111222566777777653
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.82 E-value=0.073 Score=55.33 Aligned_cols=208 Identities=12% Similarity=0.043 Sum_probs=102.3
Q ss_pred CEEEEEeCC----CeEEEEcCCCCcceeee-ccCCCCCeEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCeeEEee
Q 047260 562 SQLATASVD----KSVRLWDAANPNFCSQA-YTGHSSPIMSLDFHPKKTDLFCFCDND-----NEIQYWSINPFLCTHIT 631 (784)
Q Consensus 562 ~~Latgs~D----g~I~IWdl~~~~~~~~~-~~~h~~~V~sl~~sp~~~~ll~sgs~d-----g~I~iwDl~~~~~~~~~ 631 (784)
.+++.|+.+ ..+.+||+.+....... +......-..+.+ +..+++.|+.+ ..+.+||..+.+-....
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM---AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE---CCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 345555543 35778888765532211 1111111112222 34477776644 35888998876544332
Q ss_pred cCC----eeEEEEecCCCEEEEEECC-----CcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEe-------
Q 047260 632 KGG----TAQVRFQPRIGQLLAAASD-----KVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVS------- 693 (784)
Q Consensus 632 ~~~----v~~v~fsp~~~~Ll~~s~D-----g~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgs------- 693 (784)
..+ -..++. -++..++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+
T Consensus 94 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 94 NMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTE
T ss_pred CCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCc
Confidence 211 112222 255566666654 3578899887653322 1111111222222 556655554
Q ss_pred -CCeEEEEeCCCCceEEE--eccCCCceEEEEEecCCCEEEEEECC-----CeEEEEECCCCceEEecccCC--ceEEEE
Q 047260 694 -QNLVKVWSMASGECIQE--LSSNGNQFHSCVFHPSYSTLLVVGGI-----SSLELWNMAENKSMTIAAHEN--IISALA 763 (784)
Q Consensus 694 -dd~I~IwDl~t~~~i~~--l~~~~~~I~sl~fspdg~~L~s~s~d-----g~I~Iwdl~~~~~~~~~~h~~--~V~sla 763 (784)
.+.+.+||+.+.+-... +..... -.+++.. ++..++.|+.+ ..+.+||+.+++-..+..... .-.+++
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 248 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRS-GAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC 248 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCB-SCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred cccEEEEEeCCCCcEEECCCCccccc-cccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE
Confidence 13588999987654322 221111 1223322 55566666654 369999998876554432211 111122
Q ss_pred EeCCCCEEEEEECCC
Q 047260 764 QSPVTGMVASASHDS 778 (784)
Q Consensus 764 fspdg~~LaSgs~DG 778 (784)
.-++.+++.|+.++
T Consensus 249 -~~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 249 -AVNGLLYVVGGDDG 262 (302)
T ss_dssp -EETTEEEEECCBCS
T ss_pred -EECCEEEEECCcCC
Confidence 22567777777654
No 328
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.82 E-value=0.043 Score=60.17 Aligned_cols=129 Identities=19% Similarity=0.249 Sum_probs=90.0
Q ss_pred CCcEEEEECCCCeEEEEEeCC----CCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCc------------eEEEecc---
Q 047260 653 DKVVSIFDIETDRQTHSLQGH----AELVNYICWDTNGDYLASVSQNLVKVWSMASGE------------CIQELSS--- 713 (784)
Q Consensus 653 Dg~I~IwDl~t~~~i~~l~~h----~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~------------~i~~l~~--- 713 (784)
++.||.-++......+.+... ...|..+..+|+|.+||..++..|.|..+..+. ..+.+..
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 366777776644334444432 235788999999999999999999999887321 1223332
Q ss_pred ---CCCceEEEEEecCC---CEEEEEECCCeEEEEECCCCce--EEe---------cccCCceEEEEEeCCCCEEEEEE-
Q 047260 714 ---NGNQFHSCVFHPSY---STLLVVGGISSLELWNMAENKS--MTI---------AAHENIISALAQSPVTGMVASAS- 775 (784)
Q Consensus 714 ---~~~~I~sl~fspdg---~~L~s~s~dg~I~Iwdl~~~~~--~~~---------~~h~~~V~slafspdg~~LaSgs- 775 (784)
...+|..+.|||-+ ..|++-..|+.|++||+..... ..+ ......|.+++|..++-.|+..+
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~ 199 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNT 199 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEEC
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEec
Confidence 25679999999964 5799999999999999986221 111 12336789999999877666655
Q ss_pred -CCCcEE
Q 047260 776 -HDSSVK 781 (784)
Q Consensus 776 -~DG~V~ 781 (784)
.+|.|+
T Consensus 200 t~~GDIY 206 (452)
T 3pbp_A 200 TEGGDIF 206 (452)
T ss_dssp TTSCEEE
T ss_pred CCCCCEE
Confidence 777775
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.81 E-value=0.13 Score=53.95 Aligned_cols=224 Identities=8% Similarity=0.022 Sum_probs=111.4
Q ss_pred EEEEEeCCCeEEEEECCCCceee-ecCCCCCCeEEEEEccCCCEEEEEeC----C-------CeEEEEcCCCCcceeee-
Q 047260 521 LLASSGHDRKVVLWNMDTLQTES-TPEDHKSVVTDVRFRPNSSQLATASV----D-------KSVRLWDAANPNFCSQA- 587 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~~~~-~l~~h~~~It~i~fspdg~~Latgs~----D-------g~I~IWdl~~~~~~~~~- 587 (784)
+++.|+ ..+.+||..+.+-.. .+..............++.+++.|+. + ..+.+||..+.......
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344555 569999998766432 22111122223333347778888874 1 12778888876532111
Q ss_pred ccCCCCCeEEEEEcCCCCcEEEEEeCC--------CeEEEEeCCCCeeEEeec--CC-eeEEEEecCCCEEEEEEC----
Q 047260 588 YTGHSSPIMSLDFHPKKTDLFCFCDND--------NEIQYWSINPFLCTHITK--GG-TAQVRFQPRIGQLLAAAS---- 652 (784)
Q Consensus 588 ~~~h~~~V~sl~~sp~~~~ll~sgs~d--------g~I~iwDl~~~~~~~~~~--~~-v~~v~fsp~~~~Ll~~s~---- 652 (784)
..........+.+ +..+++.|+.+ ..+.+||+.+.+-..... .+ ....+...++..++.|+.
T Consensus 85 ~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 85 LPSPRCLFGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDR 161 (315)
T ss_dssp BSSCEESCEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTS
T ss_pred CCcchhceeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCC
Confidence 1100011112222 34466666632 458899998765433322 11 111122234455566654
Q ss_pred --CCcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEe-CC-----eEEEEeCCCCceEEEeccCCCc-eEEE
Q 047260 653 --DKVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVS-QN-----LVKVWSMASGECIQELSSNGNQ-FHSC 721 (784)
Q Consensus 653 --Dg~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgs-dd-----~I~IwDl~t~~~i~~l~~~~~~-I~sl 721 (784)
-..+.+||..+.+-... +........++.+ ++++++.|+ ++ .+.+||+.+.+-...-...... -.++
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSL 239 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeE
Confidence 24689999987643221 1111111222222 566666655 22 6889999887443322111111 1223
Q ss_pred EEecCCCEEEEEECC--------------CeEEEEECCCCceEEe
Q 047260 722 VFHPSYSTLLVVGGI--------------SSLELWNMAENKSMTI 752 (784)
Q Consensus 722 ~fspdg~~L~s~s~d--------------g~I~Iwdl~~~~~~~~ 752 (784)
+.. ++..++.|+.+ ..|.+||+.+.+-..+
T Consensus 240 ~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 240 VSL-VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred EEE-CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 322 55666666653 2478899888765433
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.63 E-value=0.094 Score=54.98 Aligned_cols=207 Identities=10% Similarity=0.002 Sum_probs=102.0
Q ss_pred EEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeC-----C------CeEEEEeCCCCeeEEee
Q 047260 563 QLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDN-----D------NEIQYWSINPFLCTHIT 631 (784)
Q Consensus 563 ~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~-----d------g~I~iwDl~~~~~~~~~ 631 (784)
+++.|+ ..+.+||..+.+....................++ .+++.|+. . ..+.+||..+.+-....
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344555 5799999998775432222211222222223344 46666662 1 13778888876543322
Q ss_pred c--CCe--eEEEEecCCCEEEEEECC--------CcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEeC---
Q 047260 632 K--GGT--AQVRFQPRIGQLLAAASD--------KVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVSQ--- 694 (784)
Q Consensus 632 ~--~~v--~~v~fsp~~~~Ll~~s~D--------g~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgsd--- 694 (784)
. .+. ..++. -++..++.|+.+ ..+.+||..+.+-... +........ ++. -++++++.|+.
T Consensus 84 ~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT-VLS-HMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEE-ETTEEEEECCBCTT
T ss_pred CCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccccee-EEE-ECCEEEEEeCCCCC
Confidence 2 111 11222 244455555521 5689999987642221 111111112 222 35566666553
Q ss_pred ----CeEEEEeCCCCceEEEeccCCCc-eEEEEEecCCCEEEEEECCC-----eEEEEECCCCceEEecccC--CceEEE
Q 047260 695 ----NLVKVWSMASGECIQELSSNGNQ-FHSCVFHPSYSTLLVVGGIS-----SLELWNMAENKSMTIAAHE--NIISAL 762 (784)
Q Consensus 695 ----d~I~IwDl~t~~~i~~l~~~~~~-I~sl~fspdg~~L~s~s~dg-----~I~Iwdl~~~~~~~~~~h~--~~V~sl 762 (784)
+.+.+||+.+.+-...-...... -.+++.. ++..++.|+.++ .+.+||+.+.+-..+.... ..-.++
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSL 239 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeE
Confidence 26899999876432211111111 1222222 556677776553 5889999887655443211 111122
Q ss_pred EEeCCCCEEEEEECC
Q 047260 763 AQSPVTGMVASASHD 777 (784)
Q Consensus 763 afspdg~~LaSgs~D 777 (784)
+. -++++++.|+.+
T Consensus 240 ~~-~~~~l~v~GG~~ 253 (315)
T 4asc_A 240 VS-LVGTLYAIGGFA 253 (315)
T ss_dssp EE-ETTEEEEEEEEE
T ss_pred EE-ECCEEEEECCcc
Confidence 22 256777777764
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.53 E-value=0.32 Score=50.90 Aligned_cols=223 Identities=6% Similarity=0.014 Sum_probs=107.8
Q ss_pred EEEEEeCCCeEEEEECCCCceeee-cCCCCCCeEEEEEccCCCEEEEEeC----CC-------eEEEEcCCCCcceeee-
Q 047260 521 LLASSGHDRKVVLWNMDTLQTEST-PEDHKSVVTDVRFRPNSSQLATASV----DK-------SVRLWDAANPNFCSQA- 587 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t~~~~~~-l~~h~~~It~i~fspdg~~Latgs~----Dg-------~I~IWdl~~~~~~~~~- 587 (784)
+++.|+. .+.+||..+.+-... +..............++.+++.|+. ++ .+.+||..+.......
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 378899887664331 1111111222233447778888873 12 2778888775532211
Q ss_pred ccCCCCCeEEEEEcCCCCcEEEEEeCC-------CeEEEEeCCCCeeEEeec--CCe-eEEEEecCCCEEEEEEC-----
Q 047260 588 YTGHSSPIMSLDFHPKKTDLFCFCDND-------NEIQYWSINPFLCTHITK--GGT-AQVRFQPRIGQLLAAAS----- 652 (784)
Q Consensus 588 ~~~h~~~V~sl~~sp~~~~ll~sgs~d-------g~I~iwDl~~~~~~~~~~--~~v-~~v~fsp~~~~Ll~~s~----- 652 (784)
..........+.+ + ..+++.|+.+ ..+.+||+.+.+-..... ... ...+...++..++.|+.
T Consensus 96 ~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 96 LPSARCLFGLGEV--D-DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKK 172 (318)
T ss_dssp BSSCBCSCEEEEE--T-TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSC
T ss_pred CCccccccceEEE--C-CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCC
Confidence 1111111122222 3 3466666643 357888988765443322 111 11112234455555553
Q ss_pred -CCcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEe-C-----CeEEEEeCCCCceEEE--eccCCCceEEE
Q 047260 653 -DKVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVS-Q-----NLVKVWSMASGECIQE--LSSNGNQFHSC 721 (784)
Q Consensus 653 -Dg~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgs-d-----d~I~IwDl~t~~~i~~--l~~~~~~I~sl 721 (784)
-..+.+||+.+.+-... +........++.+ ++++++.|+ + +.+.+||+.+.+-... +..... -.++
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~ 249 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS-SISL 249 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB-SCEE
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc-ceEE
Confidence 24699999988753322 1111111222222 556666654 1 2678899887653321 211111 1222
Q ss_pred EEecCCCEEEEEECC--------------CeEEEEECCCCceEEe
Q 047260 722 VFHPSYSTLLVVGGI--------------SSLELWNMAENKSMTI 752 (784)
Q Consensus 722 ~fspdg~~L~s~s~d--------------g~I~Iwdl~~~~~~~~ 752 (784)
+. -++..++.|+.+ ..|.+||+.+.+-..+
T Consensus 250 ~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 250 VS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 22 345556665543 3588899888765543
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.43 E-value=0.13 Score=54.83 Aligned_cols=226 Identities=9% Similarity=0.032 Sum_probs=109.9
Q ss_pred CCCEEEEEeCC-CeEEEEECCC--Cc--eeeecC-CCCCCeEEEEEccCCCEEEEEeC-C---------CeEEEEcCCCC
Q 047260 518 DGKLLASSGHD-RKVVLWNMDT--LQ--TESTPE-DHKSVVTDVRFRPNSSQLATASV-D---------KSVRLWDAANP 581 (784)
Q Consensus 518 dg~~Lasgs~D-g~I~IWd~~t--~~--~~~~l~-~h~~~It~i~fspdg~~Latgs~-D---------g~I~IWdl~~~ 581 (784)
++++++.|+.+ ..+.+||+.+ .+ .+..+. .....-.++.+ ++++++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666666643 4688999863 22 222222 11112222233 5667777765 2 46889999876
Q ss_pred cceeeeccC-CC-CCeEEEEEcCCCCcEEEEEeCC---------------------------------------CeEEEE
Q 047260 582 NFCSQAYTG-HS-SPIMSLDFHPKKTDLFCFCDND---------------------------------------NEIQYW 620 (784)
Q Consensus 582 ~~~~~~~~~-h~-~~V~sl~~sp~~~~ll~sgs~d---------------------------------------g~I~iw 620 (784)
......... .. ....++. . +..+++.|+.+ ..+.+|
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--H-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--E-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred cEEECCCCCCcccccceEEE--E-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 532221111 11 1122222 2 34477777654 578999
Q ss_pred eCCCCeeEEeec--C--Ce-eEEEEecCCCEEEEEEC------CCcEEEEEC--CCCeEEEEEeC---CCCCEEEEEEcC
Q 047260 621 SINPFLCTHITK--G--GT-AQVRFQPRIGQLLAAAS------DKVVSIFDI--ETDRQTHSLQG---HAELVNYICWDT 684 (784)
Q Consensus 621 Dl~~~~~~~~~~--~--~v-~~v~fsp~~~~Ll~~s~------Dg~I~IwDl--~t~~~i~~l~~---h~~~V~sl~~sp 684 (784)
|+.+.+-..... . .. .+++.. ++..++.|+. ...+.+||+ .+.+ ...+.. ........+...
T Consensus 174 d~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~-W~~~~~~~~~~~~~~~~~~~~ 251 (357)
T 2uvk_A 174 DPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLK-WNKLAPVSSPDGVAGGFAGIS 251 (357)
T ss_dssp ETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CE-EEECCCSSTTTCCBSCEEEEE
T ss_pred eCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCc-EEecCCCCCCcccccceEEEE
Confidence 998755443322 1 11 222222 4445555543 346777887 4332 222211 111111112223
Q ss_pred CCCEEEEEeC-----------------------CeEEEEeCCCCc--eEEEeccCCCceEEEEEecCCCEEEEEECCC--
Q 047260 685 NGDYLASVSQ-----------------------NLVKVWSMASGE--CIQELSSNGNQFHSCVFHPSYSTLLVVGGIS-- 737 (784)
Q Consensus 685 dg~~Lasgsd-----------------------d~I~IwDl~t~~--~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg-- 737 (784)
++++++.|+. ..+.+||+.+.+ .+..+...... ..++.-+++.++.|+.++
T Consensus 252 ~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~ 329 (357)
T 2uvk_A 252 NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGG 329 (357)
T ss_dssp TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGG
T ss_pred CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCC
Confidence 5566665541 147789988754 34444332222 222334667777887652
Q ss_pred ----eEEEEECCCCceEEe
Q 047260 738 ----SLELWNMAENKSMTI 752 (784)
Q Consensus 738 ----~I~Iwdl~~~~~~~~ 752 (784)
.|.++++++++.+..
T Consensus 330 ~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 330 KAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CEEEEEEEEEC-CCSCEEE
T ss_pred CEeeeEEEEEEcCcEeEee
Confidence 477779988887643
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.34 E-value=1.4 Score=48.89 Aligned_cols=106 Identities=9% Similarity=0.120 Sum_probs=62.2
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee--eecCC------CCCCeEEEEEccC---CCEEEEEeC------
Q 047260 507 NSKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTE--STPED------HKSVVTDVRFRPN---SSQLATASV------ 569 (784)
Q Consensus 507 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~--~~l~~------h~~~It~i~fspd---g~~Latgs~------ 569 (784)
-...+.|+|.|+|+++++-...+.|++++..+++.. ..+.. ....+..|+|+|+ +..|+++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 446789999999997776544457988886555432 22221 2456789999995 555555432
Q ss_pred -------CCeEEEEcCCCCc-------ceeeecc-CCCCCeEEEEEcCCCCcEEEEEe
Q 047260 570 -------DKSVRLWDAANPN-------FCSQAYT-GHSSPIMSLDFHPKKTDLFCFCD 612 (784)
Q Consensus 570 -------Dg~I~IWdl~~~~-------~~~~~~~-~h~~~V~sl~~sp~~~~ll~sgs 612 (784)
...|.-|++.... .+...+. ........|+|.|++..++.+++
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1245555543221 1111111 11234789999999974444443
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.32 E-value=0.28 Score=51.38 Aligned_cols=208 Identities=11% Similarity=0.050 Sum_probs=99.6
Q ss_pred EEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeC----CC-------eEEEEeCCCCeeEEee
Q 047260 563 QLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDN----DN-------EIQYWSINPFLCTHIT 631 (784)
Q Consensus 563 ~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~----dg-------~I~iwDl~~~~~~~~~ 631 (784)
+++.|+. .+.+||..+.+....................+ ..+++.|+. ++ .+.+||..+.+-....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQ-NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSS-SCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEEC-CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 3444443 48899998876433222211111122222233 447777762 12 2778888765544332
Q ss_pred c--CC--eeEEEEecCCCEEEEEECC-------CcEEEEECCCCeEEEEEeCCCCCE-EEEEEcCCCCEEEEEeC-----
Q 047260 632 K--GG--TAQVRFQPRIGQLLAAASD-------KVVSIFDIETDRQTHSLQGHAELV-NYICWDTNGDYLASVSQ----- 694 (784)
Q Consensus 632 ~--~~--v~~v~fsp~~~~Ll~~s~D-------g~I~IwDl~t~~~i~~l~~h~~~V-~sl~~spdg~~Lasgsd----- 694 (784)
. .+ ...++. -++..++.|+.+ ..+.+||..+.+-...-....... .+++. .++++++.|+.
T Consensus 95 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 95 PLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKK 172 (318)
T ss_dssp CBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSC
T ss_pred CCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCC
Confidence 1 11 112222 245566666643 358889988765332211111111 11222 35666665541
Q ss_pred --CeEEEEeCCCCceEEEeccCC-CceEEEEEecCCCEEEEEECC-----CeEEEEECCCCceEEecccCC--ceEEEEE
Q 047260 695 --NLVKVWSMASGECIQELSSNG-NQFHSCVFHPSYSTLLVVGGI-----SSLELWNMAENKSMTIAAHEN--IISALAQ 764 (784)
Q Consensus 695 --d~I~IwDl~t~~~i~~l~~~~-~~I~sl~fspdg~~L~s~s~d-----g~I~Iwdl~~~~~~~~~~h~~--~V~slaf 764 (784)
+.+.+||+.+.+-...-.... ..-.+++.. ++..++.|+.+ ..+.+||+.+.+-..+..... .-.+++
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~- 250 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV- 250 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE-
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE-
Confidence 268999998875332211111 111233332 55566666543 368899998876554332111 111222
Q ss_pred eCCCCEEEEEECC
Q 047260 765 SPVTGMVASASHD 777 (784)
Q Consensus 765 spdg~~LaSgs~D 777 (784)
.-++++++.|+.+
T Consensus 251 ~~~~~i~v~GG~~ 263 (318)
T 2woz_A 251 SLAGSLYAIGGFA 263 (318)
T ss_dssp EETTEEEEECCBC
T ss_pred EECCEEEEECCee
Confidence 2346677777654
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.13 E-value=0.26 Score=61.46 Aligned_cols=213 Identities=10% Similarity=0.158 Sum_probs=127.3
Q ss_pred CCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcE
Q 047260 528 DRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDL 607 (784)
Q Consensus 528 Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~l 607 (784)
...|.|.|+.+...+.+- .-.--+.-.+|..+.||.-. ..++.|+|+++... .+.+.- ..+|.-=.|-.....-
T Consensus 47 ~~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~k-lks~~~-~e~VvfWkWis~~~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSK-MKAHTM-TDDVTFWKWISLNTVA 120 (1630)
T ss_pred CceEEEEECCCCCCcccc---cccchhhccCCCcceEEEec-CCeEEEeehHHhhh-hccccc-CCCceEEEecCCCeeE
Confidence 447999999876544221 11122344677777776654 67899999988653 332222 3456555666554322
Q ss_pred EEEEeCCCeEEEEeCCCC-eeEEee-------cCCeeEEEEecCCCEEEEEEC-------CCcEEEEECCCCeEEEEEeC
Q 047260 608 FCFCDNDNEIQYWSINPF-LCTHIT-------KGGTAQVRFQPRIGQLLAAAS-------DKVVSIFDIETDRQTHSLQG 672 (784)
Q Consensus 608 l~sgs~dg~I~iwDl~~~-~~~~~~-------~~~v~~v~fsp~~~~Ll~~s~-------Dg~I~IwDl~t~~~i~~l~~ 672 (784)
+++ +..|+.|++... .....+ ...|...+.+++.++++..+- .|.+.+|..+.+. -..+.|
T Consensus 121 lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~ieg 196 (1630)
T 1xi4_A 121 LVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEG 196 (1630)
T ss_pred EEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhH
Confidence 332 678999999631 111111 244556667888888776553 4788888877542 234556
Q ss_pred CCCCEEEEEEcC---CCCEEEEEeC----CeEEEEeCCCC---ce------EEEeccC---CCceEEEEEecCCCEEEEE
Q 047260 673 HAELVNYICWDT---NGDYLASVSQ----NLVKVWSMASG---EC------IQELSSN---GNQFHSCVFHPSYSTLLVV 733 (784)
Q Consensus 673 h~~~V~sl~~sp---dg~~Lasgsd----d~I~IwDl~t~---~~------i~~l~~~---~~~I~sl~fspdg~~L~s~ 733 (784)
|.+....+.... ...+++.+.. +.+.|.++... .. +..+... .+-..++..++....++..
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~i 276 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI 276 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEE
Confidence 665544444321 1223333332 48888888542 11 1111111 2234567788888899999
Q ss_pred ECCCeEEEEECCCCceE
Q 047260 734 GGISSLELWNMAENKSM 750 (784)
Q Consensus 734 s~dg~I~Iwdl~~~~~~ 750 (784)
+..|.|++||+.++.++
T Consensus 277 tk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 277 TKYGYIHLYDLETGTCI 293 (1630)
T ss_pred ecCceEEEEecccchhh
Confidence 99999999999999876
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.09 E-value=0.26 Score=52.74 Aligned_cols=187 Identities=10% Similarity=0.028 Sum_probs=98.5
Q ss_pred CEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEE--cCCCCcEEEEE-eCCCeEEEEeCCCCeeEEeecC----C
Q 047260 562 SQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDF--HPKKTDLFCFC-DNDNEIQYWSINPFLCTHITKG----G 634 (784)
Q Consensus 562 ~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~--sp~~~~ll~sg-s~dg~I~iwDl~~~~~~~~~~~----~ 634 (784)
..++.++.||.|.-+|.++++..-..-.....++....- .+.+..+++.. ..||.|..++..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 468889999999999998877433322221122222110 01122344443 5799999999887654433321 0
Q ss_pred eeEEEEe-----------cCCCEEEEEECCCcEEEEECCCCeEEEEEeCCC--CC-----EEEEEEc-----CCCCEEEE
Q 047260 635 TAQVRFQ-----------PRIGQLLAAASDKVVSIFDIETDRQTHSLQGHA--EL-----VNYICWD-----TNGDYLAS 691 (784)
Q Consensus 635 v~~v~fs-----------p~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~--~~-----V~sl~~s-----pdg~~Las 691 (784)
...+... ..++.+++++.++.+...|+++|+.+..+.... .. ..|.... ..+..|+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 1112211 156788999999999999999999999886421 11 1111110 12345555
Q ss_pred EeCC-eEEEEeCCCCceEEEe-----ccCCCc--e-EEEEEecCCCEEEEEECCCeEEEEECCCCceEE
Q 047260 692 VSQN-LVKVWSMASGECIQEL-----SSNGNQ--F-HSCVFHPSYSTLLVVGGISSLELWNMAENKSMT 751 (784)
Q Consensus 692 gsdd-~I~IwDl~t~~~i~~l-----~~~~~~--I-~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~ 751 (784)
+..+ .+.+.+ ++|+ +..+ ...... + ..-..+.++.+ ++++.||.|..+|..++..+-
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 5544 666665 4443 2111 111000 0 00000123444 557778888888877776553
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.95 E-value=2.7 Score=46.59 Aligned_cols=103 Identities=8% Similarity=0.076 Sum_probs=60.8
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcce-eeeccC------CCCCeEEEEEcCC---CCcEEEEEeC------
Q 047260 550 SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFC-SQAYTG------HSSPIMSLDFHPK---KTDLFCFCDN------ 613 (784)
Q Consensus 550 ~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~-~~~~~~------h~~~V~sl~~sp~---~~~ll~sgs~------ 613 (784)
...+.|+|.|+|+++++-...+.|++++..++... +..+.. ....+..|+|+|+ +..++++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45679999999987776544457888876544321 111111 2355779999996 5556555442
Q ss_pred ------CCeEEEEeCCCC-------eeEE-eec----CCeeEEEEecCCCEEEEEEC
Q 047260 614 ------DNEIQYWSINPF-------LCTH-ITK----GGTAQVRFQPRIGQLLAAAS 652 (784)
Q Consensus 614 ------dg~I~iwDl~~~-------~~~~-~~~----~~v~~v~fsp~~~~Ll~~s~ 652 (784)
...|.-|++... +.+. .+. .....++|.|++..+++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235555554321 1111 111 23578999999987666553
No 338
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.94 E-value=2.4 Score=45.74 Aligned_cols=253 Identities=9% Similarity=-0.020 Sum_probs=119.3
Q ss_pred CCceEEEEEcC--CCCEEEEEeCCC----eEEEEECCCCceeeecC------C--------CCCCeEEEEEcc-C-CCEE
Q 047260 507 NSKVTCCHFSS--DGKLLASSGHDR----KVVLWNMDTLQTESTPE------D--------HKSVVTDVRFRP-N-SSQL 564 (784)
Q Consensus 507 ~~~V~~l~fsp--dg~~Lasgs~Dg----~I~IWd~~t~~~~~~l~------~--------h~~~It~i~fsp-d-g~~L 564 (784)
...|.+|++.| ++.++ +++..| .|...+ +.++.-..+. . +...|.+|++.| + ...|
T Consensus 54 ~~~v~~i~~dp~~~~~l~-~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l 131 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERML-MAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTW 131 (394)
T ss_dssp TSEEEEEEECSSSTTCEE-EEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCE
T ss_pred CCceEEEEECCCCCCeEE-EEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEE
Confidence 45699999998 44444 444444 344332 2222212111 1 112578899987 2 4566
Q ss_pred EEEeCCCeEEEEcCCCCcceee-ecc----------------CCCCCeEEEEEcCCC-CcEEEEEeCCCeEEEEeCCCCe
Q 047260 565 ATASVDKSVRLWDAANPNFCSQ-AYT----------------GHSSPIMSLDFHPKK-TDLFCFCDNDNEIQYWSINPFL 626 (784)
Q Consensus 565 atgs~Dg~I~IWdl~~~~~~~~-~~~----------------~h~~~V~sl~~sp~~-~~ll~sgs~dg~I~iwDl~~~~ 626 (784)
+.+...+.|...+-........ ... .....|.+|.++|.. ..+++... ++.|...+-....
T Consensus 132 ~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~DgG~t 210 (394)
T 3b7f_A 132 YAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFESTDAGTD 210 (394)
T ss_dssp EEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEESSTTSS
T ss_pred EEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEECCCCCC
Confidence 6666666555443221111111 110 122357899998853 33444433 4444444322111
Q ss_pred eEEee---------------cCCeeEEEEecC-CCEEEEEECCCcEEEEECCCCeEEEEEeC--CC---CCEEEEEEcCC
Q 047260 627 CTHIT---------------KGGTAQVRFQPR-IGQLLAAASDKVVSIFDIETDRQTHSLQG--HA---ELVNYICWDTN 685 (784)
Q Consensus 627 ~~~~~---------------~~~v~~v~fsp~-~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~--h~---~~V~sl~~spd 685 (784)
-.... ...+.++.++|. ...++++...+ |...+- .++....+.. .. ..+.++.++|.
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~ 288 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQR 288 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSS
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCC
Confidence 11111 023678888886 36677766544 544432 2333322221 11 34567888763
Q ss_pred --CCEEEEEe-----------CCeEEEEeCCC-CceEEEecc--CC-C-----ceEEEEEecCC-CEEEEEECCCeEEEE
Q 047260 686 --GDYLASVS-----------QNLVKVWSMAS-GECIQELSS--NG-N-----QFHSCVFHPSY-STLLVVGGISSLELW 742 (784)
Q Consensus 686 --g~~Lasgs-----------dd~I~IwDl~t-~~~i~~l~~--~~-~-----~I~sl~fspdg-~~L~s~s~dg~I~Iw 742 (784)
+.+++... ++...||...+ ++.-..+.. .. . ....++++|.. ..|++++.++.|..-
T Consensus 289 ~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S 368 (394)
T 3b7f_A 289 DPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS 368 (394)
T ss_dssp CTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE
T ss_pred CCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 34444321 12345555444 333222221 11 0 11357788754 457777666665543
Q ss_pred ECCCCce-EEecccCCceEEEEEe
Q 047260 743 NMAENKS-MTIAAHENIISALAQS 765 (784)
Q Consensus 743 dl~~~~~-~~~~~h~~~V~slafs 765 (784)
+ +.++. ..+..+-..|.+|.|.
T Consensus 369 ~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 369 A-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp S-STTSBCEEEECSCSCEEEEEEE
T ss_pred C-CCCCCceEcccCCCCeeEEEEe
Confidence 2 33332 2333444457777764
No 339
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.85 E-value=0.26 Score=61.47 Aligned_cols=232 Identities=13% Similarity=0.190 Sum_probs=138.9
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCC--
Q 047260 514 HFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGH-- 591 (784)
Q Consensus 514 ~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h-- 591 (784)
-.+|..+.||.-. ..++.|||+++...+..+.- ...|.-=.|-.+. .|+..+ +..|.-|++.....+.+.+..|
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~ 147 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSS 147 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcchh
Confidence 3566666666544 67899999998877776643 3456666776544 444443 4579999998655566666655
Q ss_pred --CCCeEEEEEcCCCCcEEEEEe------CCCeEEEEeCCCCeeEEeecCCee---EEEE--ecCCCEEEEEEC----CC
Q 047260 592 --SSPIMSLDFHPKKTDLFCFCD------NDNEIQYWSINPFLCTHITKGGTA---QVRF--QPRIGQLLAAAS----DK 654 (784)
Q Consensus 592 --~~~V~sl~~sp~~~~ll~sgs------~dg~I~iwDl~~~~~~~~~~~~v~---~v~f--sp~~~~Ll~~s~----Dg 654 (784)
...|..-..+++..+++++|= -.|.+.+|..+.... ..++++.. .+.+ .+....+++-.. .+
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~ 226 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCc
Confidence 456777777888888887764 347888888764322 11112111 1111 111122333222 37
Q ss_pred cEEEEECCCC---eE------EEEEeC---CCCCEEEEEEcCCCCEEEEE-eCCeEEEEeCCCCceEEEeccCCCceEEE
Q 047260 655 VVSIFDIETD---RQ------THSLQG---HAELVNYICWDTNGDYLASV-SQNLVKVWSMASGECIQELSSNGNQFHSC 721 (784)
Q Consensus 655 ~I~IwDl~t~---~~------i~~l~~---h~~~V~sl~~spdg~~Lasg-sdd~I~IwDl~t~~~i~~l~~~~~~I~sl 721 (784)
.++|.++... .. +..+.. -.+--.++..++.-.++... ..|.|.+||+.++.++..-......|...
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~ 306 (1630)
T 1xi4_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 306 (1630)
T ss_pred eEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEe
Confidence 8888888542 11 001111 12223345555544444444 46699999999999987776666666665
Q ss_pred EEecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 722 VFHPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 722 ~fspdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
+.+....-++.....|.|.-..+++...+
T Consensus 307 ~~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 307 APHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred ccCCCCCceEEEcCCceEEEEEEccchhh
Confidence 55555455777777787777666665544
No 340
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=95.84 E-value=0.54 Score=55.53 Aligned_cols=237 Identities=9% Similarity=0.040 Sum_probs=125.5
Q ss_pred EEEE-EcCCCCEEEEEe-----CCCeEEEEECCCCceeee-cC-CCCC------CeEEEEEccCCCEEEEE---------
Q 047260 511 TCCH-FSSDGKLLASSG-----HDRKVVLWNMDTLQTEST-PE-DHKS------VVTDVRFRPNSSQLATA--------- 567 (784)
Q Consensus 511 ~~l~-fspdg~~Lasgs-----~Dg~I~IWd~~t~~~~~~-l~-~h~~------~It~i~fspdg~~Latg--------- 567 (784)
..+. ++||+++++.+- +-..|+++|+.+++.+.. +. .-+. ....++|..+..++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 3344 889999877642 224699999999887642 22 0001 11345887444344432
Q ss_pred -eCCCeEEEEcCCCCcc-eeeeccCCCCCe-EEEEEcCCCCc----EEEEEeC---CCeEEEEeCCC--CeeEEeecCCe
Q 047260 568 -SVDKSVRLWDAANPNF-CSQAYTGHSSPI-MSLDFHPKKTD----LFCFCDN---DNEIQYWSINP--FLCTHITKGGT 635 (784)
Q Consensus 568 -s~Dg~I~IWdl~~~~~-~~~~~~~h~~~V-~sl~~sp~~~~----ll~sgs~---dg~I~iwDl~~--~~~~~~~~~~v 635 (784)
+....|+.|.+-+... -..++.+....+ .....++++.. ++++.+. ...+++.|... ..........-
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 291 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSD 291 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCc
Confidence 1225689998876532 233344433333 34455666664 4554432 24566667652 33222222222
Q ss_pred eEEEEecCCCEEEEE----------ECCCcEEEEECCCCe-------EEEE-Ee-CCCCCEEEEEEcCCCCEEEEEe-CC
Q 047260 636 AQVRFQPRIGQLLAA----------ASDKVVSIFDIETDR-------QTHS-LQ-GHAELVNYICWDTNGDYLASVS-QN 695 (784)
Q Consensus 636 ~~v~fsp~~~~Ll~~----------s~Dg~I~IwDl~t~~-------~i~~-l~-~h~~~V~sl~~spdg~~Lasgs-dd 695 (784)
..+.....+..++.. ...+.|.++|+.+.. .... +. .....+..+.|..+ .++++.. ++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~ 370 (711)
T 4hvt_A 292 ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNV 370 (711)
T ss_dssp CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETT
T ss_pred ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECC
Confidence 223334444333322 236789999987631 2222 32 23446778888876 4555544 44
Q ss_pred --eEEEEeCCCCc-eEEE-eccC-CCceEEEEEecCCCEEE-EEECC---CeEEEEECCCCce
Q 047260 696 --LVKVWSMASGE-CIQE-LSSN-GNQFHSCVFHPSYSTLL-VVGGI---SSLELWNMAENKS 749 (784)
Q Consensus 696 --~I~IwDl~t~~-~i~~-l~~~-~~~I~sl~fspdg~~L~-s~s~d---g~I~Iwdl~~~~~ 749 (784)
.|.++|+.+++ .+.. +... ...+....+.+++..++ +.++. +.+..+|+. ++.
T Consensus 371 ~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~ 432 (711)
T 4hvt_A 371 VAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HEL 432 (711)
T ss_dssp EEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCE
T ss_pred EEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcE
Confidence 78889887764 2333 3222 24566566667765444 44433 578888877 443
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.80 E-value=0.48 Score=49.30 Aligned_cols=181 Identities=15% Similarity=0.104 Sum_probs=92.8
Q ss_pred CCCEEEEEeC----C-----CeEEEEECCCCceeee--cCCCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEcCCCC
Q 047260 518 DGKLLASSGH----D-----RKVVLWNMDTLQTEST--PEDHKSVVTDVRFRPNSSQLATASVD-----KSVRLWDAANP 581 (784)
Q Consensus 518 dg~~Lasgs~----D-----g~I~IWd~~t~~~~~~--l~~h~~~It~i~fspdg~~Latgs~D-----g~I~IWdl~~~ 581 (784)
++.+++.|+. + ..+.+||..+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5667777765 2 4588999886543322 2111122222333 66677776643 35888998876
Q ss_pred cceeee-ccCCCCCeEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCeeEEeecC----CeeEEEEecCCCEEEEEE
Q 047260 582 NFCSQA-YTGHSSPIMSLDFHPKKTDLFCFCDND-----NEIQYWSINPFLCTHITKG----GTAQVRFQPRIGQLLAAA 651 (784)
Q Consensus 582 ~~~~~~-~~~h~~~V~sl~~sp~~~~ll~sgs~d-----g~I~iwDl~~~~~~~~~~~----~v~~v~fsp~~~~Ll~~s 651 (784)
...... +........++.+ +..+++.|+.+ ..+.+||+.+..-...... ....++.. ++..++.|+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred eEeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeC
Confidence 532211 1111111222222 34467776654 4688999887554433221 11122222 455556665
Q ss_pred CC-----CcEEEEECCCCeEEEE--EeCCCCCEEEEEEcCCCCEEEEEe-C-----CeEEEEeCCCCc
Q 047260 652 SD-----KVVSIFDIETDRQTHS--LQGHAELVNYICWDTNGDYLASVS-Q-----NLVKVWSMASGE 706 (784)
Q Consensus 652 ~D-----g~I~IwDl~t~~~i~~--l~~h~~~V~sl~~spdg~~Lasgs-d-----d~I~IwDl~t~~ 706 (784)
.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+ + +.|.+||+.+.+
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 53 5699999987643321 1111111222222 566666654 1 268888887764
No 342
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.72 E-value=2.9 Score=45.06 Aligned_cols=258 Identities=9% Similarity=-0.034 Sum_probs=121.7
Q ss_pred EEEEEeCCCeEEEEECCC-Cceeeec--CCCCCCeEEEEEcc-CCCEEEEEeCCC----eEEEEcCCCCcceeee-----
Q 047260 521 LLASSGHDRKVVLWNMDT-LQTESTP--EDHKSVVTDVRFRP-NSSQLATASVDK----SVRLWDAANPNFCSQA----- 587 (784)
Q Consensus 521 ~Lasgs~Dg~I~IWd~~t-~~~~~~l--~~h~~~It~i~fsp-dg~~Latgs~Dg----~I~IWdl~~~~~~~~~----- 587 (784)
.|.+|+..| +.+++... +.....+ ......|.+|++.| +...|+++...| .|...+ +.+......
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPA 101 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcccc
Confidence 566777777 55555432 2211111 12345799999998 334455555554 343332 112211111
Q ss_pred ccC--------CCCCeEEEEEcCCC-CcEEEEEeCCCeEEEEeCCC--CeeEEee-------------------cCCeeE
Q 047260 588 YTG--------HSSPIMSLDFHPKK-TDLFCFCDNDNEIQYWSINP--FLCTHIT-------------------KGGTAQ 637 (784)
Q Consensus 588 ~~~--------h~~~V~sl~~sp~~-~~ll~sgs~dg~I~iwDl~~--~~~~~~~-------------------~~~v~~ 637 (784)
+.. ....|.+|++.|.. ...+.++...+.|...+-.. .+.+... ...+.+
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~ 181 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHS 181 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEE
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeE
Confidence 111 11257789998742 22344444456565554322 1222110 124567
Q ss_pred EEEecC-CCEEEEEECCCcEEEEECCCCeEEEEEeC-----C--------CCCEEEEEEcCC-CCEEEEEeCCeEEEEeC
Q 047260 638 VRFQPR-IGQLLAAASDKVVSIFDIETDRQTHSLQG-----H--------AELVNYICWDTN-GDYLASVSQNLVKVWSM 702 (784)
Q Consensus 638 v~fsp~-~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~-----h--------~~~V~sl~~spd-g~~Lasgsdd~I~IwDl 702 (784)
|.++|. ...++++..++.|...+- .++....+.. + ...+.+|.++|+ ...|+++..+.|...+-
T Consensus 182 i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D 260 (394)
T 3b7f_A 182 ILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDR 260 (394)
T ss_dssp EEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEET
T ss_pred EEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCC
Confidence 888874 456666665554544432 2222222211 0 124889999985 35666666666555542
Q ss_pred CCCceEEEecc--CC---CceEEEEEecC-CCEEEEEEC-----------CCeEEEEECCC-CceE-Eec-ccC--C---
Q 047260 703 ASGECIQELSS--NG---NQFHSCVFHPS-YSTLLVVGG-----------ISSLELWNMAE-NKSM-TIA-AHE--N--- 757 (784)
Q Consensus 703 ~t~~~i~~l~~--~~---~~I~sl~fspd-g~~L~s~s~-----------dg~I~Iwdl~~-~~~~-~~~-~h~--~--- 757 (784)
.++.-..+.. .. ..+.+++++|. ...|+++.. ++...||...+ ++.. .+. .-. .
T Consensus 261 -~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~ 339 (394)
T 3b7f_A 261 -REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWL 339 (394)
T ss_dssp -TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCC
T ss_pred -CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccc
Confidence 2332222221 11 23567788763 344555542 23344554443 2322 111 101 0
Q ss_pred --ceEEEEEeCCC-CEEEEEECCCcEEE
Q 047260 758 --IISALAQSPVT-GMVASASHDSSVKL 782 (784)
Q Consensus 758 --~V~slafspdg-~~LaSgs~DG~V~I 782 (784)
...+++++|.. ..|+.++.++.|.+
T Consensus 340 ~~~~~~~~~~p~~~~~l~~g~~~g~l~~ 367 (394)
T 3b7f_A 340 TVKRQAMTADAHAPVGVYFGTTGGEIWA 367 (394)
T ss_dssp CCCTBSEEECCSSSCCEEEECTTSCEEE
T ss_pred eEEEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 12357787743 44666665665543
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.66 E-value=1.3 Score=50.07 Aligned_cols=252 Identities=13% Similarity=0.106 Sum_probs=138.3
Q ss_pred EEEEeCCCeEEEEECCCCceeeecCCC-------------------------CCCeE--EEEEcc---CCCEEEEEeC-C
Q 047260 522 LASSGHDRKVVLWNMDTLQTESTPEDH-------------------------KSVVT--DVRFRP---NSSQLATASV-D 570 (784)
Q Consensus 522 Lasgs~Dg~I~IWd~~t~~~~~~l~~h-------------------------~~~It--~i~fsp---dg~~Latgs~-D 570 (784)
|.+|+..|.|+|+-+.+++.+..+... .+... .+++.. ||++|+.-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 677888999999998888777665310 01111 233332 6778877664 5
Q ss_pred CeEEEEcCCCCcceeeeccCCCCCeEEEEEc--CCCCcEEEEEe------CCCeEE---------E---EeCCCCeeEEe
Q 047260 571 KSVRLWDAANPNFCSQAYTGHSSPIMSLDFH--PKKTDLFCFCD------NDNEIQ---------Y---WSINPFLCTHI 630 (784)
Q Consensus 571 g~I~IWdl~~~~~~~~~~~~h~~~V~sl~~s--p~~~~ll~sgs------~dg~I~---------i---wDl~~~~~~~~ 630 (784)
..|...+++.-+....+-......+..+.|- |+..++|+.+- .||... + .|..+.+....
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Q 232 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQ 232 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEE
Confidence 5677777776553222223455677888886 56665555442 233211 1 12222111110
Q ss_pred --ecCCeeEEEEecCCCEEEEEECCC---------------cEEEEECCC-------C--e-----EEEEEeC-------
Q 047260 631 --TKGGTAQVRFQPRIGQLLAAASDK---------------VVSIFDIET-------D--R-----QTHSLQG------- 672 (784)
Q Consensus 631 --~~~~v~~v~fsp~~~~Ll~~s~Dg---------------~I~IwDl~t-------~--~-----~i~~l~~------- 672 (784)
..+....+...+++++.++.+.+. .|.++++.. + + -+..+.+
T Consensus 233 v~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~~ 312 (638)
T 3sbq_A 233 VIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGKD 312 (638)
T ss_dssp EEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTBC
T ss_pred EEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccccC
Confidence 112223344556666766665421 244444320 0 0 1112221
Q ss_pred --------CCCCEEEEEEcCCCCEEEEEeC--CeEEEEeCCCC------c------e-EEEeccCCCceEEEEEecCCCE
Q 047260 673 --------HAELVNYICWDTNGDYLASVSQ--NLVKVWSMASG------E------C-IQELSSNGNQFHSCVFHPSYST 729 (784)
Q Consensus 673 --------h~~~V~sl~~spdg~~Lasgsd--d~I~IwDl~t~------~------~-i~~l~~~~~~I~sl~fspdg~~ 729 (784)
-......+.++|||+++++++. .+|.|+|++.- + + +.+.. -+-.....+|.++|..
T Consensus 313 ~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~a 391 (638)
T 3sbq_A 313 SKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNA 391 (638)
T ss_dssp CSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEE
T ss_pred CceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCce
Confidence 1122345778999999999884 49999998741 1 1 22332 3445678899999955
Q ss_pred EEEEECCCeEEEEECCCC----------ceE-EecccCCceEEEEE------eCCCCEEEEEE
Q 047260 730 LLVVGGISSLELWNMAEN----------KSM-TIAAHENIISALAQ------SPVTGMVASAS 775 (784)
Q Consensus 730 L~s~s~dg~I~Iwdl~~~----------~~~-~~~~h~~~V~slaf------spdg~~LaSgs 775 (784)
..+.--|..|.-|++... ..+ .+..|-. +-.+.- .+||++|++.+
T Consensus 392 YTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 392 YTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred EeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEec
Confidence 555557899999998653 222 3333333 222322 46888888875
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.57 E-value=0.22 Score=53.32 Aligned_cols=188 Identities=6% Similarity=-0.080 Sum_probs=104.7
Q ss_pred CEEEEEeCCCeEEEEECCCCceeeecCCC-CCCeEEEEEc--cCCCEEEEE--eCCCeEEEEcCCCCcceeeecc---CC
Q 047260 520 KLLASSGHDRKVVLWNMDTLQTESTPEDH-KSVVTDVRFR--PNSSQLATA--SVDKSVRLWDAANPNFCSQAYT---GH 591 (784)
Q Consensus 520 ~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h-~~~It~i~fs--pdg~~Latg--s~Dg~I~IWdl~~~~~~~~~~~---~h 591 (784)
.++++++.||.|.-+|.++|+....+... ..++....-. +.+..++.+ +.||.|..++..++......-. -.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999999888643 1222221100 112234433 5799999999877642211100 01
Q ss_pred CCCeEE---EEE-cC---CCCcEEEEEeCCCeEEEEeCCCCeeEEeecCCee----------EEEEe-----cCCCEEEE
Q 047260 592 SSPIMS---LDF-HP---KKTDLFCFCDNDNEIQYWSINPFLCTHITKGGTA----------QVRFQ-----PRIGQLLA 649 (784)
Q Consensus 592 ~~~V~s---l~~-sp---~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~~~v~----------~v~fs-----p~~~~Ll~ 649 (784)
..++.. ..+ .+ .....+++++.+|.+...|+++++.+..+..... |.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 222221 000 00 0234778899999999999999998888763311 11111 12356777
Q ss_pred EECCCcEEEEECCCCeEEEEE-----eCCCCC--E-EEEEEcCCCCEEEEEeCCeEEEEeCCCCceEE
Q 047260 650 AASDKVVSIFDIETDRQTHSL-----QGHAEL--V-NYICWDTNGDYLASVSQNLVKVWSMASGECIQ 709 (784)
Q Consensus 650 ~s~Dg~I~IwDl~t~~~i~~l-----~~h~~~--V-~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~ 709 (784)
+..+..|.+.+ ++++ +..+ ...... + ..-..+.|+.++++..++.|..+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 77777777776 4443 2111 111000 0 00001234677666667799999988888765
No 345
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.51 E-value=1.4 Score=43.91 Aligned_cols=171 Identities=12% Similarity=-0.004 Sum_probs=96.5
Q ss_pred CCEEEEEeCCCeEEEEcCCCCcc--e--eeeccCC--CCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-------Cee
Q 047260 561 SSQLATASVDKSVRLWDAANPNF--C--SQAYTGH--SSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP-------FLC 627 (784)
Q Consensus 561 g~~Latgs~Dg~I~IWdl~~~~~--~--~~~~~~h--~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~-------~~~ 627 (784)
...|++...| +|++=....... . .....+. =..+.+++|+|++. +.++ .+|.++-.+..+ ...
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCcccccccc
Confidence 4567777777 666655544331 0 1111122 24678999999776 5555 678877777644 111
Q ss_pred EEeec---CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeE-------EEEEeCCCCCEEEEEEcCCCCEEEEEeCCeE
Q 047260 628 THITK---GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQ-------THSLQGHAELVNYICWDTNGDYLASVSQNLV 697 (784)
Q Consensus 628 ~~~~~---~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~-------i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I 697 (784)
.++-. .....+.|.|++...++ .||.|+-++..+... ...-...-..+..|.+.|+|.+.++. ++.+
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~l 156 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQF 156 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEE
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcE
Confidence 11111 12467889999877766 669988887643211 11111122467999999999999888 7775
Q ss_pred EEEeCCCCc------eEEEec-cCCCceEEEEEecCCCEEEEEECCCeEE
Q 047260 698 KVWSMASGE------CIQELS-SNGNQFHSCVFHPSYSTLLVVGGISSLE 740 (784)
Q Consensus 698 ~IwDl~t~~------~i~~l~-~~~~~I~sl~fspdg~~L~s~s~dg~I~ 740 (784)
+-+...++. ....+- ..-.....+.|.+++...++. ++.|+
T Consensus 157 yr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 157 YKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp EEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred EecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence 433333221 111221 222344556688888655544 66443
No 346
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=95.48 E-value=0.0014 Score=78.01 Aligned_cols=7 Identities=14% Similarity=0.373 Sum_probs=2.8
Q ss_pred CCeEEEE
Q 047260 614 DNEIQYW 620 (784)
Q Consensus 614 dg~I~iw 620 (784)
+|...+|
T Consensus 487 ~G~AI~y 493 (727)
T 4b8c_D 487 DGCCIFF 493 (727)
T ss_dssp CCCEEEC
T ss_pred ccEEEEE
Confidence 3334443
No 347
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.30 E-value=0.41 Score=47.82 Aligned_cols=141 Identities=13% Similarity=0.050 Sum_probs=84.0
Q ss_pred CCeeEEEEecCCCEEEEEECCCcEEEEECCCCeE------EEEEeC-CCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCC
Q 047260 633 GGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQ------THSLQG-HAELVNYICWDTNGDYLASVSQNLVKVWSMASG 705 (784)
Q Consensus 633 ~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~------i~~l~~-h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~ 705 (784)
..+..++|+|++. |+++ .+|.++-.+..+... -..+-. --....++.|+|+|.+.++ +++.|+-++-.+.
T Consensus 41 ~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCS
T ss_pred ccceeEEECCCcc-EEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcC
Confidence 4677999999776 4444 778887777655211 111110 1112478899999999888 7888877776432
Q ss_pred ce-------EEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-------Eec-ccCCceEEEEEeCCCCE
Q 047260 706 EC-------IQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-------TIA-AHENIISALAQSPVTGM 770 (784)
Q Consensus 706 ~~-------i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-------~~~-~h~~~V~slafspdg~~ 770 (784)
.. ...-...-..+..+.+.|+|... ++. |+.++-+........ .+. ......+.+.|++++.+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Ly-av~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l 195 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLY-AVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL 195 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEE-EEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEE-EEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence 11 11111222567999999999754 444 777654433322211 111 33334556779999877
Q ss_pred EEEEECCCcE
Q 047260 771 VASASHDSSV 780 (784)
Q Consensus 771 LaSgs~DG~V 780 (784)
.++. +|.+
T Consensus 196 ~~v~--~g~~ 203 (236)
T 1tl2_A 196 FGVQ--GGKF 203 (236)
T ss_dssp EEEE--TTEE
T ss_pred EEEe--CCeE
Confidence 7766 7654
No 348
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.28 E-value=0.81 Score=50.14 Aligned_cols=142 Identities=14% Similarity=0.064 Sum_probs=94.7
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCceeeecCCC----CCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc--------
Q 047260 516 SSDGKLLASSGHDRKVVLWNMDTLQTESTPEDH----KSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF-------- 583 (784)
Q Consensus 516 spdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h----~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~-------- 583 (784)
+.+|..|+++- ++.||.-++......+.+..- -..|..+..+|+|++||..+. ..|.|-.+..+..
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 44666666554 577888888754444444322 236888999999999998864 5788888763220
Q ss_pred ---eeeecc-C-----CCCCeEEEEEcCCCCc--EEEEEeCCCeEEEEeCCCCe--eE------Eeec-----CCeeEEE
Q 047260 584 ---CSQAYT-G-----HSSPIMSLDFHPKKTD--LFCFCDNDNEIQYWSINPFL--CT------HITK-----GGTAQVR 639 (784)
Q Consensus 584 ---~~~~~~-~-----h~~~V~sl~~sp~~~~--ll~sgs~dg~I~iwDl~~~~--~~------~~~~-----~~v~~v~ 639 (784)
..+.+. + ...+|..+.|||-+.. .+++-..|+.|++||+.... .. ..+. ..+.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 011111 1 3578999999997643 67777889999999997411 11 1111 4677889
Q ss_pred EecCCCEEEEEE--CCCcEEEE
Q 047260 640 FQPRIGQLLAAA--SDKVVSIF 659 (784)
Q Consensus 640 fsp~~~~Ll~~s--~Dg~I~Iw 659 (784)
|..++-.|++.. .+|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999877788866 67888765
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.15 E-value=0.94 Score=47.99 Aligned_cols=188 Identities=10% Similarity=0.016 Sum_probs=91.3
Q ss_pred CCCEEEEEeC-C---------CeEEEEECCCCceeeec--C-CCCCCeEEEEEccCCCEEEEEeCC--------------
Q 047260 518 DGKLLASSGH-D---------RKVVLWNMDTLQTESTP--E-DHKSVVTDVRFRPNSSQLATASVD-------------- 570 (784)
Q Consensus 518 dg~~Lasgs~-D---------g~I~IWd~~t~~~~~~l--~-~h~~~It~i~fspdg~~Latgs~D-------------- 570 (784)
++++++.|+. + ..+.+||..+.+-.... . .......++. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhc
Confidence 5667777765 2 46899999875433222 1 1111222233 467788888765
Q ss_pred -------------------------CeEEEEcCCCCcceeeeccCCCCCe-EEEEEcCCCCcEEEEEeC------CCeEE
Q 047260 571 -------------------------KSVRLWDAANPNFCSQAYTGHSSPI-MSLDFHPKKTDLFCFCDN------DNEIQ 618 (784)
Q Consensus 571 -------------------------g~I~IWdl~~~~~~~~~~~~h~~~V-~sl~~sp~~~~ll~sgs~------dg~I~ 618 (784)
..+.+||+.+.......-....... .+++.. +..+++.|+. ...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~ 220 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVF 220 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceE
Confidence 5788999987653322111111111 223332 3346666653 34677
Q ss_pred EEeC--CCCeeEEeec--C---CeeEEEEecCCCEEEEEECC----------------------CcEEEEECCCCe--EE
Q 047260 619 YWSI--NPFLCTHITK--G---GTAQVRFQPRIGQLLAAASD----------------------KVVSIFDIETDR--QT 667 (784)
Q Consensus 619 iwDl--~~~~~~~~~~--~---~v~~v~fsp~~~~Ll~~s~D----------------------g~I~IwDl~t~~--~i 667 (784)
+||+ .+..-..... . .....+...++..++.|+.+ ..+.+||+.+.+ .+
T Consensus 221 ~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~ 300 (357)
T 2uvk_A 221 ELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS 300 (357)
T ss_dssp EEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE
T ss_pred EEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC
Confidence 7887 3333222211 1 11111233344555666532 257889988653 33
Q ss_pred EEEeCCCCCEEEEEEcCCCCEEEEEe-CC------eEEEEeCCCCceEEEe
Q 047260 668 HSLQGHAELVNYICWDTNGDYLASVS-QN------LVKVWSMASGECIQEL 711 (784)
Q Consensus 668 ~~l~~h~~~V~sl~~spdg~~Lasgs-dd------~I~IwDl~t~~~i~~l 711 (784)
..+........++. -++++++.|+ +. .|.++++++++.+...
T Consensus 301 ~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 301 GELSQGRAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EECSSCCBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred CCCCCCcccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 33332222222222 3566666665 21 4666788887766544
No 350
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.83 E-value=0.94 Score=53.32 Aligned_cols=192 Identities=5% Similarity=-0.016 Sum_probs=100.6
Q ss_pred cCCCEEEEEeCC----CeEEEEcCCCCcceeeecc------CCCCCeEEEEEcCCCCcEEEEEeCC------CeEEEEeC
Q 047260 559 PNSSQLATASVD----KSVRLWDAANPNFCSQAYT------GHSSPIMSLDFHPKKTDLFCFCDND------NEIQYWSI 622 (784)
Q Consensus 559 pdg~~Latgs~D----g~I~IWdl~~~~~~~~~~~------~h~~~V~sl~~sp~~~~ll~sgs~d------g~I~iwDl 622 (784)
.++.+++.|+.+ ..+.+||..+......... .....-.+++..+.+..+++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 355666666643 3577888877653322201 1111112233332133466666643 35788998
Q ss_pred CCCeeEEeecC----CeeEEEEecCCCEEEEEECCC--cEEEEECCCCeEEEEE-----eCCCCCEEEEEEcCC-CCEEE
Q 047260 623 NPFLCTHITKG----GTAQVRFQPRIGQLLAAASDK--VVSIFDIETDRQTHSL-----QGHAELVNYICWDTN-GDYLA 690 (784)
Q Consensus 623 ~~~~~~~~~~~----~v~~v~fsp~~~~Ll~~s~Dg--~I~IwDl~t~~~i~~l-----~~h~~~V~sl~~spd-g~~La 690 (784)
.+..-...... .-.+++...++..++.|+.++ .+.+||..+..-...- ........++.+..+ +++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 87554433221 112233324667777777643 7999999887532211 111222233555554 66666
Q ss_pred EEeC--------CeEEEEeCCCCce-----EEEecc---CCCceEEEEEecCCCEEEEEECC--------CeEEEEECCC
Q 047260 691 SVSQ--------NLVKVWSMASGEC-----IQELSS---NGNQFHSCVFHPSYSTLLVVGGI--------SSLELWNMAE 746 (784)
Q Consensus 691 sgsd--------d~I~IwDl~t~~~-----i~~l~~---~~~~I~sl~fspdg~~L~s~s~d--------g~I~Iwdl~~ 746 (784)
.|+. +.+.+||+.+... -..+.. ....-.+++...++..++.|+.+ ..|.+||+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 6652 2689999988761 112211 11122334444446666666642 4699999998
Q ss_pred CceE
Q 047260 747 NKSM 750 (784)
Q Consensus 747 ~~~~ 750 (784)
.+-.
T Consensus 636 ~~W~ 639 (695)
T 2zwa_A 636 ETLT 639 (695)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7654
No 351
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.59 E-value=1.3 Score=52.03 Aligned_cols=189 Identities=11% Similarity=0.092 Sum_probs=99.5
Q ss_pred CCCCEEEEEeCC----CeEEEEECCCCceeeec-C-------CCCCCeEEEEEccCCCEEEEEeCCC------eEEEEcC
Q 047260 517 SDGKLLASSGHD----RKVVLWNMDTLQTESTP-E-------DHKSVVTDVRFRPNSSQLATASVDK------SVRLWDA 578 (784)
Q Consensus 517 pdg~~Lasgs~D----g~I~IWd~~t~~~~~~l-~-------~h~~~It~i~fspdg~~Latgs~Dg------~I~IWdl 578 (784)
.++.+++.||.+ ..+.+||..+.+-...- . .....-..+.+..++.+++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 45889998766433322 1 1111222333322677778877543 5788898
Q ss_pred CCCcceeee-ccCCCCCeEEEEEcCCCCcEEEEEeCCC--eEEEEeCCCCeeEEeec--------CCeeEEEEecC-CCE
Q 047260 579 ANPNFCSQA-YTGHSSPIMSLDFHPKKTDLFCFCDNDN--EIQYWSINPFLCTHITK--------GGTAQVRFQPR-IGQ 646 (784)
Q Consensus 579 ~~~~~~~~~-~~~h~~~V~sl~~sp~~~~ll~sgs~dg--~I~iwDl~~~~~~~~~~--------~~v~~v~fsp~-~~~ 646 (784)
.+....... ....... .+++...++ .+++.|+.++ .+.+||+.+..-..... .....+.+... +..
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~-~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDG-NVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTS-CEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCC-EEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 875532211 1111111 122222244 4677776544 68999998765443321 12233555655 445
Q ss_pred EEEEEC--C-----CcEEEEECCCCeE-----EEEEeC----CCCCEEEEEEcCCCCEEEEEe---------CCeEEEEe
Q 047260 647 LLAAAS--D-----KVVSIFDIETDRQ-----THSLQG----HAELVNYICWDTNGDYLASVS---------QNLVKVWS 701 (784)
Q Consensus 647 Ll~~s~--D-----g~I~IwDl~t~~~-----i~~l~~----h~~~V~sl~~spdg~~Lasgs---------dd~I~IwD 701 (784)
++.|+. + +.+.+||+.+..- ...+.. ...... ++...++++++.|+ .+.|.+||
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 555654 2 4588999988761 222211 111122 23333366666665 12699999
Q ss_pred CCCCceE
Q 047260 702 MASGECI 708 (784)
Q Consensus 702 l~t~~~i 708 (784)
+.+.+-.
T Consensus 633 ~~t~~W~ 639 (695)
T 2zwa_A 633 PLSETLT 639 (695)
T ss_dssp TTTTEEE
T ss_pred CCCCeEE
Confidence 9887544
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.26 E-value=8.3 Score=42.81 Aligned_cols=224 Identities=10% Similarity=0.097 Sum_probs=112.8
Q ss_pred CCeEEEEEccCCC-EEEEEeCCCeEEEEcCCCCc--ceeee----cc-----CCCCCeEEEEEcCC---CCcEEEEEeC-
Q 047260 550 SVVTDVRFRPNSS-QLATASVDKSVRLWDAANPN--FCSQA----YT-----GHSSPIMSLDFHPK---KTDLFCFCDN- 613 (784)
Q Consensus 550 ~~It~i~fspdg~-~Latgs~Dg~I~IWdl~~~~--~~~~~----~~-----~h~~~V~sl~~sp~---~~~ll~sgs~- 613 (784)
..-+.|+|.|++. .|+++...|.|++++..... ..+.. +. ........|+|+|+ ...++++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457899999986 56666788999999754321 01111 11 11356789999996 3334444322
Q ss_pred -C----------CeEEEEeCCC----------CeeEEeec-----CCeeEEEEecCCCEEEEEECCC-------------
Q 047260 614 -D----------NEIQYWSINP----------FLCTHITK-----GGTAQVRFQPRIGQLLAAASDK------------- 654 (784)
Q Consensus 614 -d----------g~I~iwDl~~----------~~~~~~~~-----~~v~~v~fsp~~~~Ll~~s~Dg------------- 654 (784)
+ ..|.-|.+.. .+.+.... .....|.|.|++.++++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~ 173 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLS 173 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcC
Confidence 1 1344455431 12222211 2346799999997666665433
Q ss_pred ----cEEEEECCCC---------------------eEEEEEeCCCCCEEEEEEcCC-----CCE-EEEEeC-C----eEE
Q 047260 655 ----VVSIFDIETD---------------------RQTHSLQGHAELVNYICWDTN-----GDY-LASVSQ-N----LVK 698 (784)
Q Consensus 655 ----~I~IwDl~t~---------------------~~i~~l~~h~~~V~sl~~spd-----g~~-Lasgsd-d----~I~ 698 (784)
.|.-+|.... ..+. -.+|.. ...++|+|. |++ ++.+.. + .-.
T Consensus 174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~-a~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~e 251 (463)
T 2wg3_C 174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVF-AHGLHD-PGRCAVDRHPTDININLTILCSDSNGKNRSSAR 251 (463)
T ss_dssp SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEE-EECCSS-CCBEEEESSCSSTTCSEEEEEECC------CEE
T ss_pred CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEE-EECCCC-cceEEECCCCCCcccceEEEecccCCCCCCCCe
Confidence 2333333321 0011 112222 245789986 443 443321 1 123
Q ss_pred EEeCCCC------ceEEEeccCC-CceEEEEEecCCC------EEEEEECCCeEEEEECCCCce----EEec--------
Q 047260 699 VWSMASG------ECIQELSSNG-NQFHSCVFHPSYS------TLLVVGGISSLELWNMAENKS----MTIA-------- 753 (784)
Q Consensus 699 IwDl~t~------~~i~~l~~~~-~~I~sl~fspdg~------~L~s~s~dg~I~Iwdl~~~~~----~~~~-------- 753 (784)
|..+..+ .++..+..+. ..+..+.|-.... .++++...+.|....++.... ..+.
T Consensus 252 i~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~ 331 (463)
T 2wg3_C 252 ILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCR 331 (463)
T ss_dssp EEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSC
T ss_pred EeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCccccc
Confidence 3333322 2444554331 4567777743221 245555557776666654321 1221
Q ss_pred -ccCCceEEEEEeCCCCEEEEEE
Q 047260 754 -AHENIISALAQSPVTGMVASAS 775 (784)
Q Consensus 754 -~h~~~V~slafspdg~~LaSgs 775 (784)
.....+..+.+.|||.++++..
T Consensus 332 ~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 332 GYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp SCCCSEEEEEEECTTCCEEEEEE
T ss_pred ccccCcceEEEECCCCCEEEEec
Confidence 1235799999999999888765
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.96 E-value=3.3 Score=46.78 Aligned_cols=181 Identities=15% Similarity=0.155 Sum_probs=108.5
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCeeEEeec----CCeeEEEEe--cCCCEEEEEEC-------CCcEE------------
Q 047260 603 KKTDLFCFCDNDNEIQYWSINPFLCTHITK----GGTAQVRFQ--PRIGQLLAAAS-------DKVVS------------ 657 (784)
Q Consensus 603 ~~~~ll~sgs~dg~I~iwDl~~~~~~~~~~----~~v~~v~fs--p~~~~Ll~~s~-------Dg~I~------------ 657 (784)
||+++|+-.-.+..|...+++..++..+.+ ..+..++|. |+..++++++. ||...
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 466666666678889999999988877765 456677775 78888888875 33321
Q ss_pred EEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeC----------------CeEEEEeCCC-------Cc-------e
Q 047260 658 IFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQ----------------NLVKVWSMAS-------GE-------C 707 (784)
Q Consensus 658 IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsd----------------d~I~IwDl~t-------~~-------~ 707 (784)
..|..+.+....+.- .+....+..+++|.+.++.+. |.|.++++.. |+ -
T Consensus 221 ~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 221 AIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 122222222222111 112223445677777776541 2566766521 10 1
Q ss_pred EEEeccC---------------CCceEEEEEecCCCEEEEEEC-CCeEEEEECCCC------ce-------EEecccCCc
Q 047260 708 IQELSSN---------------GNQFHSCVFHPSYSTLLVVGG-ISSLELWNMAEN------KS-------MTIAAHENI 758 (784)
Q Consensus 708 i~~l~~~---------------~~~I~sl~fspdg~~L~s~s~-dg~I~Iwdl~~~------~~-------~~~~~h~~~ 758 (784)
+..+.+. ......|.++|||+++++++. +.++.++|+..- +. .....-.-.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 1122211 123467889999999888876 568999998741 11 111123345
Q ss_pred eEEEEEeCCCCEEEEEECCCcEEEeC
Q 047260 759 ISALAQSPVTGMVASASHDSSVKLWK 784 (784)
Q Consensus 759 V~slafspdg~~LaSgs~DG~V~IWd 784 (784)
....+|.++|....|.--|..|..|+
T Consensus 380 PlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ccEEEECCCCceEeeeeecceEEEEe
Confidence 67889999995555555788999885
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.80 E-value=3.3 Score=42.74 Aligned_cols=238 Identities=14% Similarity=0.054 Sum_probs=120.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeec
Q 047260 509 KVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAY 588 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~ 588 (784)
.|..++.... ..++. . ||.|+.|-....-.+.........|..|+...+. .++. . ||.|..|-......+-..
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P- 97 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP- 97 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC-
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC-
Confidence 3555554432 22333 4 8888888765422211111123367777765433 3333 4 899999976543221111
Q ss_pred cCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeE---EeecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCe
Q 047260 589 TGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCT---HITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDR 665 (784)
Q Consensus 589 ~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~---~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~ 665 (784)
..-...|..|+.... ..+.-. +|.|+.|-.+..-.+ ......+..++... .+.++.. ||.|+.|-.....
T Consensus 98 ~~~~~~v~~ia~G~~---hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW---ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGV--YTALAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp GGGSSSEEEEEEETT---EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS--SEEEEEE-TTEEEEEECCTTS
T ss_pred cccCCCeEEEECcCC---EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEccc--CEEEEEE-CCEEEEecCCCCC
Confidence 111246777776543 233334 999999977642111 11123444444433 3333334 7888888765421
Q ss_pred EEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECC
Q 047260 666 QTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMA 745 (784)
Q Consensus 666 ~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~ 745 (784)
.+..-......|..|+...+.. ++. .++.|+.|-....-.+..-......|..++.... +.++.. ||.|+.|-..
T Consensus 171 qlg~p~~~~~~v~~i~~G~~hs-~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~--h~~al~-~g~v~~wG~n 245 (282)
T 3qhy_B 171 QTTVPAEAQSGVDDVAGGIFHS-LAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW--YSLALK-NGKVIAWGSS 245 (282)
T ss_dssp TTSCCGGGGSSEEEEEECSSEE-EEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS--CEEEEE-TTEEEEESTT
T ss_pred CCCCceecCCCeEEEEecCCEE-EEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC--EEEEEE-CCEEEEecCC
Confidence 1110011134577776654433 333 6779999976542111100111234566655443 334444 9999999766
Q ss_pred CCceEEecccCCceEEEEEeCCC
Q 047260 746 ENKSMTIAAHENIISALAQSPVT 768 (784)
Q Consensus 746 ~~~~~~~~~h~~~V~slafspdg 768 (784)
....+.+ ...|..|+.....
T Consensus 246 ~~gq~~v---~~~v~~iaaG~~h 265 (282)
T 3qhy_B 246 RTAPSSV---QSGVSSIEAGPNA 265 (282)
T ss_dssp CCCCGGG---SSCEEEEEECSSC
T ss_pred CCccccC---CCCcEEEEECcCe
Confidence 5443322 3457777766543
No 355
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=93.34 E-value=0.016 Score=64.50 Aligned_cols=11 Identities=0% Similarity=0.139 Sum_probs=5.1
Q ss_pred cCchhHHHHhh
Q 047260 284 ASQQPQQVLAQ 294 (784)
Q Consensus 284 ~~~~~~~~~~~ 294 (784)
+++.-|..+..
T Consensus 285 ~s~e~~~~~~~ 295 (449)
T 3iot_A 285 LTDEGLEAVNK 295 (449)
T ss_dssp SSHHHHHHHHH
T ss_pred cCHHHHHHHHh
Confidence 34555544433
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.05 E-value=3.5 Score=42.56 Aligned_cols=215 Identities=15% Similarity=0.050 Sum_probs=111.2
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeE-
Q 047260 550 SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCT- 628 (784)
Q Consensus 550 ~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~- 628 (784)
..|..|+.-... .++. . ||.|..|-......+-... .....|..|+.... +.++. . ||.|+.|-.+..-.+
T Consensus 24 ~~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~-~~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 24 SGVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPA-ATQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SSCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCG-GGGSCCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTC
T ss_pred CCCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCc-cCCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCC
Confidence 357777765432 2333 4 8999999765433211111 11235777776543 23444 4 899999987642111
Q ss_pred --EeecCCeeEEEEecCCCEEEEEECCCcEEEEECCCCeEEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCCc
Q 047260 629 --HITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETDRQTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASGE 706 (784)
Q Consensus 629 --~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~~ 706 (784)
......+..++... .+.++.. ||.|+.|-......+-.-......|..|+...+..+++ .++.|+.|-....-
T Consensus 96 ~P~~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l--~~G~v~~wG~n~~g 170 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAV--KNGGVIAWGDNYFG 170 (282)
T ss_dssp CCGGGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTS
T ss_pred CCcccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEE--ECCEEEEecCCCCC
Confidence 11123555555544 3455555 89999997654211111111234566666544333332 36788888765421
Q ss_pred eEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceEEe-cccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 707 CIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSMTI-AAHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 707 ~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~~~-~~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
.+..-......|..++.... +.++. .+|.|+.|-......+-+ ......|..|+..... .++.. ||.|..|
T Consensus 171 qlg~p~~~~~~v~~i~~G~~--hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g~v~~w 242 (282)
T 3qhy_B 171 QTTVPAEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--NGKVIAW 242 (282)
T ss_dssp TTSCCGGGGSSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--TTEEEEE
T ss_pred CCCCceecCCCeEEEEecCC--EEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--CCEEEEe
Confidence 11110111234565555443 33334 589999997655332211 1223457777655433 33333 8888888
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.90 E-value=14 Score=41.02 Aligned_cols=227 Identities=9% Similarity=-0.010 Sum_probs=111.6
Q ss_pred CceEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc---eeeecC---------CCCCCeEEEEEccC----CCEEEEEeC-
Q 047260 508 SKVTCCHFSSDGK-LLASSGHDRKVVLWNMDTLQ---TESTPE---------DHKSVVTDVRFRPN----SSQLATASV- 569 (784)
Q Consensus 508 ~~V~~l~fspdg~-~Lasgs~Dg~I~IWd~~t~~---~~~~l~---------~h~~~It~i~fspd----g~~Latgs~- 569 (784)
..-+.|+|.|||. .|+++...|.|++++.+... .+..+. ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4578999999996 45556788999999754321 122111 11457889999995 333333222
Q ss_pred -C----------CeEEEEcCCCC----------cceeeec-cCCCCCeEEEEEcCCCCcEEEEEeCC-------------
Q 047260 570 -D----------KSVRLWDAANP----------NFCSQAY-TGHSSPIMSLDFHPKKTDLFCFCDND------------- 614 (784)
Q Consensus 570 -D----------g~I~IWdl~~~----------~~~~~~~-~~h~~~V~sl~~sp~~~~ll~sgs~d------------- 614 (784)
+ ..|.-|.+... +.+.... .........|.|.||+..++.+|+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~ 173 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLS 173 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcC
Confidence 1 13444555421 1111111 11223467899999997444444421
Q ss_pred ---CeEEEEeCCCC------e---------------eEEee-cCCeeEEEEecCC-----C-EEEEEECCC----cEEEE
Q 047260 615 ---NEIQYWSINPF------L---------------CTHIT-KGGTAQVRFQPRI-----G-QLLAAASDK----VVSIF 659 (784)
Q Consensus 615 ---g~I~iwDl~~~------~---------------~~~~~-~~~v~~v~fsp~~-----~-~Ll~~s~Dg----~I~Iw 659 (784)
|.|.-.|.+.. . .+... -.....++|+|.. . +++++...| .-.|.
T Consensus 174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~ 253 (463)
T 2wg3_C 174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARIL 253 (463)
T ss_dssp SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEE
T ss_pred CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEe
Confidence 22333333321 0 01111 1234567899873 3 344333212 12333
Q ss_pred ECCCC------eEEEEEeCCC-CCEEEEEEcC-------CCCEEEEEeCCeEEEEeCCCCc---eEEEe-c--------c
Q 047260 660 DIETD------RQTHSLQGHA-ELVNYICWDT-------NGDYLASVSQNLVKVWSMASGE---CIQEL-S--------S 713 (784)
Q Consensus 660 Dl~t~------~~i~~l~~h~-~~V~sl~~sp-------dg~~Lasgsdd~I~IwDl~t~~---~i~~l-~--------~ 713 (784)
.+..+ .++..+..|. ..+..+.|-. .|.+|+..-.+.|....+.... ....+ . .
T Consensus 254 ~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 333 (463)
T 2wg3_C 254 QIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGY 333 (463)
T ss_dssp EEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCSC
T ss_pred eeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCccccccc
Confidence 33322 2344443221 4677777743 2445655444555555554321 11122 1 1
Q ss_pred CCCceEEEEEecCCCEEEEEE
Q 047260 714 NGNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 714 ~~~~I~sl~fspdg~~L~s~s 734 (784)
....+..+.+.|+|.++++..
T Consensus 334 ~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 334 FSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp CCSEEEEEEECTTCCEEEEEE
T ss_pred ccCcceEEEECCCCCEEEEec
Confidence 235689999999998777665
No 358
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.49 E-value=16 Score=39.44 Aligned_cols=142 Identities=9% Similarity=0.062 Sum_probs=82.3
Q ss_pred CeeEEEEe---cC----CCEEEEEEC-CCcEEEEECCCCeEEEEEeC----C--------------CCCEEEEEEcCC--
Q 047260 634 GTAQVRFQ---PR----IGQLLAAAS-DKVVSIFDIETDRQTHSLQG----H--------------AELVNYICWDTN-- 685 (784)
Q Consensus 634 ~v~~v~fs---p~----~~~Ll~~s~-Dg~I~IwDl~t~~~i~~l~~----h--------------~~~V~sl~~spd-- 685 (784)
....+++. +. +.+++++.. ...|.|+|+.+++..+.+.. . ...|..|+++|+
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~ 232 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDS 232 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCT
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcC
Confidence 45677776 22 355566554 68899999999877665521 1 236778889987
Q ss_pred --CCEEEEEeCCeEEEEeCC-----CC---ceEEEeccC--CCceEEEEEe-cCCCEEEEEECCCeEEEEECCC-C---c
Q 047260 686 --GDYLASVSQNLVKVWSMA-----SG---ECIQELSSN--GNQFHSCVFH-PSYSTLLVVGGISSLELWNMAE-N---K 748 (784)
Q Consensus 686 --g~~Lasgsdd~I~IwDl~-----t~---~~i~~l~~~--~~~I~sl~fs-pdg~~L~s~s~dg~I~Iwdl~~-~---~ 748 (784)
++.|.-..-..-++|.+. +. ..+..+-.. ...-..+++. .+|..+++--....|..|+..+ . .
T Consensus 233 ~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~ 312 (381)
T 3q6k_A 233 EGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMK 312 (381)
T ss_dssp TSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGG
T ss_pred CCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccC
Confidence 677766653333344332 21 222222222 1333455675 4565555555667899999876 2 1
Q ss_pred eEEeccc---CCceEEEEEeCCCCEEEEEE
Q 047260 749 SMTIAAH---ENIISALAQSPVTGMVASAS 775 (784)
Q Consensus 749 ~~~~~~h---~~~V~slafspdg~~LaSgs 775 (784)
......+ -..+..+.+..++.+.+..+
T Consensus 313 n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 313 NTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp GEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred ceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 1222222 23477888888887666553
No 359
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=90.42 E-value=34 Score=40.55 Aligned_cols=145 Identities=14% Similarity=0.097 Sum_probs=75.3
Q ss_pred CCceEEEEEcCC-CCEEEEEeCCCeEEEEECCCCceeeecCCC-------CCCeEEEEEccC-CCEEEEEeCCCe----E
Q 047260 507 NSKVTCCHFSSD-GKLLASSGHDRKVVLWNMDTLQTESTPEDH-------KSVVTDVRFRPN-SSQLATASVDKS----V 573 (784)
Q Consensus 507 ~~~V~~l~fspd-g~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h-------~~~It~i~fspd-g~~Latgs~Dg~----I 573 (784)
.+.|.+|+++|. ...+++++..+.|...+= .++.-..+..+ ...|.+|+++|. ...++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999995 456666777776665542 33333333222 246999999984 344555443211 3
Q ss_pred EEEcCCC-CcceeeeccC--------CCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCC---CCeeEEee------cCCe
Q 047260 574 RLWDAAN-PNFCSQAYTG--------HSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSIN---PFLCTHIT------KGGT 635 (784)
Q Consensus 574 ~IWdl~~-~~~~~~~~~~--------h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~---~~~~~~~~------~~~v 635 (784)
.||...+ ++.-...... ....+..++++|.....++.+...+.|.. ..+ +.+.+... ...+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCe
Confidence 3443333 2211111110 01135678888876556666654444332 222 12222111 1346
Q ss_pred eEEEEecCC-CEEEEEECC
Q 047260 636 AQVRFQPRI-GQLLAAASD 653 (784)
Q Consensus 636 ~~v~fsp~~-~~Ll~~s~D 653 (784)
..+.++|.. ..++++..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 778888853 467777665
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=89.87 E-value=22 Score=37.45 Aligned_cols=258 Identities=8% Similarity=0.034 Sum_probs=134.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCc---------eeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEE---EEcCCCCc----
Q 047260 519 GKLLASSGHDRKVVLWNMDTLQ---------TESTPEDHKSVVTDVRFRPNSSQLATASVDKSVR---LWDAANPN---- 582 (784)
Q Consensus 519 g~~Lasgs~Dg~I~IWd~~t~~---------~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~---IWdl~~~~---- 582 (784)
...+++.+.+|.|+--.+.+.+ .-..++ ..+.+..+........|+.-+..|.++ +|++....
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 3467778888888876543211 111222 234455555555556666666777654 45554321
Q ss_pred -cee-eecc-CCCCCeEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCeeE-------Eeec--CCeeEEEEecCCCEEE
Q 047260 583 -FCS-QAYT-GHSSPIMSLDFHPK--KTDLFCFCDNDNEIQYWSINPFLCT-------HITK--GGTAQVRFQPRIGQLL 648 (784)
Q Consensus 583 -~~~-~~~~-~h~~~V~sl~~sp~--~~~ll~sgs~dg~I~iwDl~~~~~~-------~~~~--~~v~~v~fsp~~~~Ll 648 (784)
..+ ..+. .....|.++...++ ....++..+.+|.|+...+...... ..++ ..+..+........++
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 82 GQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLL 161 (327)
T ss_dssp CEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEE
T ss_pred CEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEE
Confidence 111 1111 23455666554442 3447888899999999887542211 1121 3445555555667899
Q ss_pred EEECCCcEEEEECC--CC---------eEEEEEeCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCCC-------ceEE
Q 047260 649 AAASDKVVSIFDIE--TD---------RQTHSLQGHAELVNYICWDTNGDYLASVS-QNLVKVWSMASG-------ECIQ 709 (784)
Q Consensus 649 ~~s~Dg~I~IwDl~--t~---------~~i~~l~~h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t~-------~~i~ 709 (784)
..+..|.+..+... .- .....+. ....|.++...+++.+|+..+ .+.++.-.+... +-+.
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~ 240 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVL 240 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEE
Confidence 99999999888776 21 1111222 344566666655555666655 558777765321 2222
Q ss_pred Eec--cCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCceE-------Eec--ccCCceEEEEEeCC-CCEEEEEECC
Q 047260 710 ELS--SNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM-------TIA--AHENIISALAQSPV-TGMVASASHD 777 (784)
Q Consensus 710 ~l~--~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~-------~~~--~h~~~V~slafspd-g~~LaSgs~D 777 (784)
.+. .....+..+....+...++..+.+|.+..++...-... ... ...+.|.++...+. ...+.+.+.+
T Consensus 241 ~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~~d~vv~~~~~~~~~~~~~~~~~~ 320 (327)
T 3uc1_A 241 TVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEESGDDNAVDAN 320 (327)
T ss_dssp SSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCCTTCCEEEEEECC------------
T ss_pred EEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhccccCCCCCCeEeEecCCCCEEEEEEEcCCCcceEEEEecC
Confidence 222 22344555555555667888888888877776542211 111 22445666655543 3445555544
Q ss_pred C
Q 047260 778 S 778 (784)
Q Consensus 778 G 778 (784)
|
T Consensus 321 g 321 (327)
T 3uc1_A 321 G 321 (327)
T ss_dssp -
T ss_pred C
Confidence 4
No 361
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=87.66 E-value=29 Score=36.13 Aligned_cols=185 Identities=10% Similarity=0.063 Sum_probs=101.7
Q ss_pred ccCCCEEEEEeCCCeEEEEcCCCCcc-------e-eeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeE-
Q 047260 558 RPNSSQLATASVDKSVRLWDAANPNF-------C-SQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFLCT- 628 (784)
Q Consensus 558 spdg~~Latgs~Dg~I~IWdl~~~~~-------~-~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~~~- 628 (784)
-++..++++.+.+|.|+--.+..-.. . ...+.. .+.+..+....... .++..+..|.++-+........
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~-~ll~~T~~G~~~~~~~~~ip~~~ 82 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHD-YLFMISNEGKLYLINAYEIKDSS 82 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSCC--
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCC-EEEEEECCCeEEEEEHHHCCCCC
Confidence 34667889999999999876543211 1 111222 23444444443434 4445566888776655311000
Q ss_pred -----------Eeec--CCeeEEEEec---CCCEEEEEECCCcEEEEECCC-------CeEEEEEeCCCCCEEEEEEcC-
Q 047260 629 -----------HITK--GGTAQVRFQP---RIGQLLAAASDKVVSIFDIET-------DRQTHSLQGHAELVNYICWDT- 684 (784)
Q Consensus 629 -----------~~~~--~~v~~v~fsp---~~~~Ll~~s~Dg~I~IwDl~t-------~~~i~~l~~h~~~V~sl~~sp- 684 (784)
..+. ..+..+...+ ...+++..+..|.++...+.. +.....+.. .+.+..+....
T Consensus 83 r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~ 161 (312)
T 1suu_A 83 RASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFK 161 (312)
T ss_dssp -----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECT
T ss_pred ccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCC
Confidence 0011 2344443322 457789999999999988743 222223333 44555554444
Q ss_pred CCCEEEEEeCCeEEEEeCCC---------CceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCC
Q 047260 685 NGDYLASVSQNLVKVWSMAS---------GECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 685 dg~~Lasgsdd~I~IwDl~t---------~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~ 746 (784)
+..+++....+.+..+.... |.....+.. ...|..+....++..+++.+..|.++..++..
T Consensus 162 ~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 162 DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 44455555566777776543 222222322 45566666655667799999999988888754
No 362
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=87.63 E-value=29 Score=36.11 Aligned_cols=225 Identities=9% Similarity=0.038 Sum_probs=121.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCcee---------eecCCCCCCeEEEEEccCCCEEEEEeCCCeEEEEcC---CCCcc-
Q 047260 517 SDGKLLASSGHDRKVVLWNMDTLQTE---------STPEDHKSVVTDVRFRPNSSQLATASVDKSVRLWDA---ANPNF- 583 (784)
Q Consensus 517 pdg~~Lasgs~Dg~I~IWd~~t~~~~---------~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~IWdl---~~~~~- 583 (784)
++..++++.+.+|.|+--.+...+.. ..++.. +.+..+........++..+..|.++-+.. .....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 46678889999999998877543221 122333 34555555555667788888898665544 32110
Q ss_pred ----e---eeeccCCCCCeEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCee-------EEeec--CCeeEEEEecCCC
Q 047260 584 ----C---SQAYTGHSSPIMSLDFHPK--KTDLFCFCDNDNEIQYWSINPFLC-------THITK--GGTAQVRFQPRIG 645 (784)
Q Consensus 584 ----~---~~~~~~h~~~V~sl~~sp~--~~~ll~sgs~dg~I~iwDl~~~~~-------~~~~~--~~v~~v~fsp~~~ 645 (784)
. ...+. ....|.++...++ ....++..+..|.++...+..... ...+. +.+..+.......
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 0 01111 2344555544331 233566678899999988753321 11111 3455555555567
Q ss_pred EEEEEECCCcEEEEECCC---------CeEEEEEeCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCC-------CceE
Q 047260 646 QLLAAASDKVVSIFDIET---------DRQTHSLQGHAELVNYICWDTNGDYLASVS-QNLVKVWSMAS-------GECI 708 (784)
Q Consensus 646 ~Ll~~s~Dg~I~IwDl~t---------~~~i~~l~~h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t-------~~~i 708 (784)
.++..+.+|.+..+.... |.....+. ....|..+....++..|++.+ .+.++..++.. ++=+
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~~~~R~~kGv 242 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATGY 242 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHHhcccCCCCCCE
Confidence 899999999999998743 11222232 244566665544555555555 55777777642 1212
Q ss_pred EEec---cCCCceEEEEEecCCCEEEEEECCCeEEEEEC
Q 047260 709 QELS---SNGNQFHSCVFHPSYSTLLVVGGISSLELWNM 744 (784)
Q Consensus 709 ~~l~---~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl 744 (784)
..+. .....+..+....+...++..+..|.+.-...
T Consensus 243 ~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~ 281 (312)
T 1suu_A 243 TSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVA 281 (312)
T ss_dssp ECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEG
T ss_pred EeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 2222 22234444433344556777777775444443
No 363
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=86.69 E-value=38 Score=36.50 Aligned_cols=225 Identities=7% Similarity=0.024 Sum_probs=112.5
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc-----------eeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEE
Q 047260 550 SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF-----------CSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQ 618 (784)
Q Consensus 550 ~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~-----------~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~ 618 (784)
..|..|+.. ....+.-..||.|..|-...... ...........|..|+... ...+.-..||.|+
T Consensus 75 ~~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~---~hs~al~~~G~v~ 149 (423)
T 3mvd_K 75 PDAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGD---SHSACLLEDGRVF 149 (423)
T ss_dssp SSEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECS---SEEEEEETTSCEE
T ss_pred CCceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCc---CeEEEEeCCCeEE
Confidence 346666653 44666667899999996543110 0000111234566666543 2444556799999
Q ss_pred EEeC--CCCee----------E-EeecCCeeEEEEecCCCEEEEEECCCcEEEEECCCC---------------------
Q 047260 619 YWSI--NPFLC----------T-HITKGGTAQVRFQPRIGQLLAAASDKVVSIFDIETD--------------------- 664 (784)
Q Consensus 619 iwDl--~~~~~----------~-~~~~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~--------------------- 664 (784)
.|-. +..-. . .........+.+..-..+.++...+|.|+.|-....
T Consensus 150 ~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~ 229 (423)
T 3mvd_K 150 AWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRD 229 (423)
T ss_dssp EEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTT
T ss_pred EEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCccccccccccccccc
Confidence 9975 32111 1 011112222333344467777788999999964321
Q ss_pred --eEEEEEeCCCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCC-----------ceEEEeccCCCceEEEEEecCCCEEE
Q 047260 665 --RQTHSLQGHAELVNYICWDTNGDYLASVSQNLVKVWSMASG-----------ECIQELSSNGNQFHSCVFHPSYSTLL 731 (784)
Q Consensus 665 --~~i~~l~~h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~-----------~~i~~l~~~~~~I~sl~fspdg~~L~ 731 (784)
.+..........|..|+......+++...++.|+.|-.... ............|..++. -..+.+
T Consensus 230 ~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~--G~~ht~ 307 (423)
T 3mvd_K 230 LLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG--GQHHTV 307 (423)
T ss_dssp TSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE--CSSEEE
T ss_pred ccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc--ccCeEE
Confidence 11111111233455555442222222123557777754321 111111111234555444 334677
Q ss_pred EEECCCeEEEEECCCC---------c-e---EEecccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 732 VVGGISSLELWNMAEN---------K-S---MTIAAHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 732 s~s~dg~I~Iwdl~~~---------~-~---~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
+...+|.|+.|-.... . . ..+......|..|+... ...+....||.|+.|
T Consensus 308 alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~--~hs~alt~~G~v~~w 370 (423)
T 3mvd_K 308 ILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGE--VCSYAVTIDGKLYSW 370 (423)
T ss_dssp EEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEET--TEEEEEETTSCEEEE
T ss_pred EEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCC--CeEEEEcCCCCEEEE
Confidence 7788899999965321 1 1 12222233677776653 333444688888888
No 364
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=86.41 E-value=59 Score=38.44 Aligned_cols=142 Identities=10% Similarity=0.093 Sum_probs=69.9
Q ss_pred CCCeEEEEEccC-CCEEEEEeCCCeEEEEcCCCCcceeeeccC------CCCCeEEEEEcCCCCcEEEEEeCC------C
Q 047260 549 KSVVTDVRFRPN-SSQLATASVDKSVRLWDAANPNFCSQAYTG------HSSPIMSLDFHPKKTDLFCFCDND------N 615 (784)
Q Consensus 549 ~~~It~i~fspd-g~~Latgs~Dg~I~IWdl~~~~~~~~~~~~------h~~~V~sl~~sp~~~~ll~sgs~d------g 615 (784)
...|.+|+++|. ...++++...+.|...+=. ++.-...... ....|.+|++.|.....++.+..+ +
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~Dg-G~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAG-TSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETT-TTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCC-CCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999994 4566777776765544322 2211111111 124699999998654444444322 3
Q ss_pred eEEEEeCCCCeeEEeec----------C--CeeEEEEecCC-CEEEEEECCCcEEEEECCCCeEEEEEeC------CCCC
Q 047260 616 EIQYWSINPFLCTHITK----------G--GTAQVRFQPRI-GQLLAAASDKVVSIFDIETDRQTHSLQG------HAEL 676 (784)
Q Consensus 616 ~I~iwDl~~~~~~~~~~----------~--~v~~v~fsp~~-~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~------h~~~ 676 (784)
.|.. ..+.++.-.... + .+..++++|.. +.++++...+.|.. ....++.-..+.. ....
T Consensus 93 ~v~~-S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 93 AFYV-SEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEE-ESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEE-ECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCC
Confidence 3322 222222211111 1 24567888754 45555553443321 2222332222221 1246
Q ss_pred EEEEEEcCC-CCEEEEEe
Q 047260 677 VNYICWDTN-GDYLASVS 693 (784)
Q Consensus 677 V~sl~~spd-g~~Lasgs 693 (784)
+..|.++|. +..++++.
T Consensus 171 ~~~i~~~p~~~~~~~~~~ 188 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASA 188 (789)
T ss_dssp EEEEEECTTSTTCEEEEE
T ss_pred eEEEEECCCCCCEEEEEE
Confidence 788999874 33444444
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=85.52 E-value=34 Score=34.88 Aligned_cols=193 Identities=12% Similarity=0.030 Sum_probs=109.1
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEE---EcCCCCcceeeeccCCCCCeEEEEEcCC-CCcEEEEEeCCCeEEEEeCCC
Q 047260 549 KSVVTDVRFRPNSSQLATASVDKSVRL---WDAANPNFCSQAYTGHSSPIMSLDFHPK-KTDLFCFCDNDNEIQYWSINP 624 (784)
Q Consensus 549 ~~~It~i~fspdg~~Latgs~Dg~I~I---Wdl~~~~~~~~~~~~h~~~V~sl~~sp~-~~~ll~sgs~dg~I~iwDl~~ 624 (784)
.+.+..+.......+|+.-+.+|.++- |++....... . ......|..+.. .+ ....++..+.+|.|+...+..
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHH
Confidence 345555555555556666677787654 4443221111 2 233556776654 32 344777889999999998764
Q ss_pred Ce------eEEeec--CCeeEEEEecCCCEEEEEECCCcEEEEECCC---------CeEEEEEeCCCCCEEEEEEcCCCC
Q 047260 625 FL------CTHITK--GGTAQVRFQPRIGQLLAAASDKVVSIFDIET---------DRQTHSLQGHAELVNYICWDTNGD 687 (784)
Q Consensus 625 ~~------~~~~~~--~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t---------~~~i~~l~~h~~~V~sl~~spdg~ 687 (784)
.. ....++ ..+..+........++..+..|.+..++... |.....+. ....|..+...+++.
T Consensus 100 ~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 100 FEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEP 178 (276)
T ss_dssp TTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCS
T ss_pred hhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCC
Confidence 32 111121 3444454555567899999999998887532 22222233 234555555445555
Q ss_pred EEEEEe-CCeEEEEeCCC-------CceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEE--EECCC
Q 047260 688 YLASVS-QNLVKVWSMAS-------GECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLEL--WNMAE 746 (784)
Q Consensus 688 ~Lasgs-dd~I~IwDl~t-------~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~I--wdl~~ 746 (784)
+++..+ .+.++...+.. ++-+..+ ...+.+..+....+...++..+.+|.+.. ++..+
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 555555 55777776532 2233344 33345555544444456888888888877 77643
No 366
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=83.42 E-value=0.42 Score=40.07 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=28.4
Q ss_pred hHHHHHHHHhhcCChHHHHHHHHHhcCCCCC
Q 047260 11 MLDVYIHDYFLKRKLHASAKAFMTEGKVATD 41 (784)
Q Consensus 11 ~l~~yiydy~~k~~~~~~a~~~~~e~~~~~~ 41 (784)
=||.-|++||..+|+.+++.+|.+|.+++.+
T Consensus 12 EL~kaI~~YL~~~~~~~~~~alr~e~~~~~~ 42 (88)
T 1uuj_A 12 ELNRAIADYLRSNGYEEAYSVFKKEAELDMN 42 (88)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999987754
No 367
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=82.91 E-value=54 Score=35.04 Aligned_cols=229 Identities=8% Similarity=0.047 Sum_probs=124.7
Q ss_pred cCCCCEEEEEeCCCeEEEEECCC---------CceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEE---EcCCCCcc
Q 047260 516 SSDGKLLASSGHDRKVVLWNMDT---------LQTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRL---WDAANPNF 583 (784)
Q Consensus 516 spdg~~Lasgs~Dg~I~IWd~~t---------~~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~I---Wdl~~~~~ 583 (784)
-++..++++.+.+|.|+--.+.. +.....++ ..+.+..+........|+..+..|.+.- |++.....
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 46778999999999999876532 22233343 3455666665556667777777887654 45543210
Q ss_pred -----e-eeec-cCCCCCeEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCee-------EEeec--CCeeEEEEecCCC
Q 047260 584 -----C-SQAY-TGHSSPIMSLDFHPK--KTDLFCFCDNDNEIQYWSINPFLC-------THITK--GGTAQVRFQPRIG 645 (784)
Q Consensus 584 -----~-~~~~-~~h~~~V~sl~~sp~--~~~ll~sgs~dg~I~iwDl~~~~~-------~~~~~--~~v~~v~fsp~~~ 645 (784)
. ...+ ......|.++....+ ....++.++..|.++...+..... ...++ ..+..+.......
T Consensus 83 ~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 83 NARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDR 162 (370)
T ss_dssp TSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCC
T ss_pred ccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCc
Confidence 1 1111 123455666554332 234677788899999988653221 11111 3444445555566
Q ss_pred EEEEEECCCcEEEEECCCC-------eEEEEEe-CCCCCEEEEEEcC---------------------------------
Q 047260 646 QLLAAASDKVVSIFDIETD-------RQTHSLQ-GHAELVNYICWDT--------------------------------- 684 (784)
Q Consensus 646 ~Ll~~s~Dg~I~IwDl~t~-------~~i~~l~-~h~~~V~sl~~sp--------------------------------- 684 (784)
.++..+.+|.+..|+...- .-++-+. .....|.++...+
T Consensus 163 ~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~ 242 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVAD 242 (370)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-------------------------------
T ss_pred eEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccccccc
Confidence 7888888898888875421 1111111 1234454444333
Q ss_pred --CCCEEEEEeC-CeEEEEeCCC-------CceEEE--eccCCCceEEEEEecCCCEEEEEECCCeEEEEECC
Q 047260 685 --NGDYLASVSQ-NLVKVWSMAS-------GECIQE--LSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMA 745 (784)
Q Consensus 685 --dg~~Lasgsd-d~I~IwDl~t-------~~~i~~--l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~ 745 (784)
++..|++.++ +..+...+.. ++=+.. +....+.+..+.+..+...++..+..|.+.-..+.
T Consensus 243 ~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 243 NGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp ----CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred ccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 3445666664 4777776532 122222 22333455555555555667778888876665543
No 368
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=82.00 E-value=51 Score=34.13 Aligned_cols=228 Identities=7% Similarity=0.041 Sum_probs=121.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceee---------ecCCCCCCeEEEEEccCCCEEEEEeCCCeEEE---EcCCCCcc-
Q 047260 517 SDGKLLASSGHDRKVVLWNMDTLQTES---------TPEDHKSVVTDVRFRPNSSQLATASVDKSVRL---WDAANPNF- 583 (784)
Q Consensus 517 pdg~~Lasgs~Dg~I~IWd~~t~~~~~---------~l~~h~~~It~i~fspdg~~Latgs~Dg~I~I---Wdl~~~~~- 583 (784)
|+..++++.+.+|.|+--.+.+.+... .++.+ +.+..+........|+..+..|.+.- +++.....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 355678889999999887776533221 12222 34444444445566777777887544 45443221
Q ss_pred ----ee-eec-cCCCCCeEEEEEcC--CCCcEEEEEeCCCeEEEEeCCCCe-----eEE--ee--cCCeeEEEEecCCCE
Q 047260 584 ----CS-QAY-TGHSSPIMSLDFHP--KKTDLFCFCDNDNEIQYWSINPFL-----CTH--IT--KGGTAQVRFQPRIGQ 646 (784)
Q Consensus 584 ----~~-~~~-~~h~~~V~sl~~sp--~~~~ll~sgs~dg~I~iwDl~~~~-----~~~--~~--~~~v~~v~fsp~~~~ 646 (784)
.. ..+ ......|.++...+ +....++..+.+|.++...+.... -+. .+ .+.+..+........
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDE 159 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCE
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCE
Confidence 11 111 12334566664432 223356678889999998774211 111 11 134444444455667
Q ss_pred EEEEECCCcEEEEECCCC---------eEEEEEeCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEeCCC-------Cc--e
Q 047260 647 LLAAASDKVVSIFDIETD---------RQTHSLQGHAELVNYICWDTNGDYLASVS-QNLVKVWSMAS-------GE--C 707 (784)
Q Consensus 647 Ll~~s~Dg~I~IwDl~t~---------~~i~~l~~h~~~V~sl~~spdg~~Lasgs-dd~I~IwDl~t-------~~--~ 707 (784)
++..+.+|.+..++...- .....+. ....|.++....++..|+..+ .+.++-.++.. ++ .
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~ 238 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVI 238 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEE
T ss_pred EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEE
Confidence 888999999888876421 1111222 344566665545555555555 44777776632 11 1
Q ss_pred EEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCC
Q 047260 708 IQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 708 i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~ 746 (784)
...+....+.+..+....+...++..+.+|.+.-+++..
T Consensus 239 ~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 239 SIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp SSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred eeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 222333334555554444455677888888777666554
No 369
>1qb3_A Cyclin-dependent kinases regulatory subunit; cell cycle mutagenesis domain swapping, cyclin-dependent KIN cycle; 3.00A {Saccharomyces cerevisiae} SCOP: d.97.1.1
Probab=80.51 E-value=0.31 Score=44.27 Aligned_cols=9 Identities=22% Similarity=0.445 Sum_probs=4.0
Q ss_pred ccchhhHhh
Q 047260 161 LMDANKMAL 169 (784)
Q Consensus 161 ~~~~~~~~~ 169 (784)
|.|..|++|
T Consensus 13 l~d~er~~l 21 (150)
T 1qb3_A 13 LTDQERARV 21 (150)
T ss_dssp CCHHHHHHH
T ss_pred chHHHHHHH
Confidence 334444443
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=78.39 E-value=62 Score=32.93 Aligned_cols=152 Identities=13% Similarity=-0.000 Sum_probs=87.5
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEEC---CCCceeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEcCCCCc-
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNM---DTLQTESTPEDHKSVVTDVRFRP-NSSQLATASVDKSVRLWDAANPN- 582 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~---~t~~~~~~l~~h~~~It~i~fsp-dg~~Latgs~Dg~I~IWdl~~~~- 582 (784)
+.|.++.......+|+.-+.+|.++--.+ ........+ .....|..+.... +..+++..+.+|.|+...+..-.
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll-~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLK-SREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCS-STTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccC-CCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 44555555555556666777887665433 222111113 2355676664422 56799999999999988765421
Q ss_pred ----ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe---------eEEeec--CCeeEEEEecCCCEE
Q 047260 583 ----FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPFL---------CTHITK--GGTAQVRFQPRIGQL 647 (784)
Q Consensus 583 ----~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~~---------~~~~~~--~~v~~v~fsp~~~~L 647 (784)
.....+. ..+.+..+....... .++..+..|.+..++..... ....+. ..+..+...+++..+
T Consensus 103 ~~~G~~~i~lk-egD~l~~~~~~~~~~-~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~l 180 (276)
T 3no0_A 103 KAQGMPIIKLT-EGDEVVSIASSVDET-HILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYL 180 (276)
T ss_dssp CSTTEECSCCC-TTCCEEEEEECCSSC-EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEE
T ss_pred hcCCeEEEecC-CCCEEEEEEEeCCCC-EEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEE
Confidence 1111222 234566655554444 45556678888887754211 111111 345555555566789
Q ss_pred EEEECCCcEEEEECC
Q 047260 648 LAAASDKVVSIFDIE 662 (784)
Q Consensus 648 l~~s~Dg~I~IwDl~ 662 (784)
+..+..|.++...+.
T Consensus 181 l~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 181 LVITAKGRVKKISHE 195 (276)
T ss_dssp EEEETTSCEEEEEGG
T ss_pred EEEeCCCcEEEeEHH
Confidence 999999999888764
No 371
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=78.05 E-value=77 Score=33.82 Aligned_cols=220 Identities=10% Similarity=0.013 Sum_probs=113.1
Q ss_pred EccCCCEEEEEeCCCeEEEEcCCC------C--cceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEe---CCC-
Q 047260 557 FRPNSSQLATASVDKSVRLWDAAN------P--NFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWS---INP- 624 (784)
Q Consensus 557 fspdg~~Latgs~Dg~I~IWdl~~------~--~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwD---l~~- 624 (784)
+-++..++++.+.+|.|+--.+.. + ......+ ...+.+..+........+++ .+..|.++-+. +..
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~l-ke~D~l~~~~~~~t~d~ll~-fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAST-KEEDFIDQLWLVNTHDTLLT-FTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEEC-SCCCCEEEEEEECTTCEEEE-EETTSEEEEEEGGGSCBC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceeccc-CCCCEEEEEEEecCCCEEEE-EeCCCeEEEEEHHHCcCC
Confidence 346778999999999999764421 1 1111222 23455666555555444444 45577665554 321
Q ss_pred -----CeeEE---ee--cCCeeEEEEe---cCCCEEEEEECCCcEEEEECCC-------CeEEEEEeCCCCCEEEEEE-c
Q 047260 625 -----FLCTH---IT--KGGTAQVRFQ---PRIGQLLAAASDKVVSIFDIET-------DRQTHSLQGHAELVNYICW-D 683 (784)
Q Consensus 625 -----~~~~~---~~--~~~v~~v~fs---p~~~~Ll~~s~Dg~I~IwDl~t-------~~~i~~l~~h~~~V~sl~~-s 683 (784)
+..+. .+ ...+..+... ..+.+|+.++..|.++...+.. +.....+.. .+.+..+.. .
T Consensus 81 ~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~ 159 (370)
T 3l6v_A 81 GSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTD 159 (370)
T ss_dssp CTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEEC
T ss_pred CcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeC
Confidence 11111 11 1344444332 2356899999999999987643 222223333 334444444 3
Q ss_pred CCCCEEEEEeCCeEEEEeCCC---------CceEEEeccCCCceEEEEEec-----------------------------
Q 047260 684 TNGDYLASVSQNLVKVWSMAS---------GECIQELSSNGNQFHSCVFHP----------------------------- 725 (784)
Q Consensus 684 pdg~~Lasgsdd~I~IwDl~t---------~~~i~~l~~~~~~I~sl~fsp----------------------------- 725 (784)
.+..+++....+.+..++... |.....+. ....|.++...+
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 238 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVI 238 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC---------------------------
T ss_pred CCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEecccccccccccccccccccccccccccccc
Confidence 334445555566665565422 11111222 234455554443
Q ss_pred ------CCCEEEEEECCCeEEEEECCCCce--------E--EecccCCceEEEEEeCCCCEEEEEECCCcE
Q 047260 726 ------SYSTLLVVGGISSLELWNMAENKS--------M--TIAAHENIISALAQSPVTGMVASASHDSSV 780 (784)
Q Consensus 726 ------dg~~L~s~s~dg~I~Iwdl~~~~~--------~--~~~~h~~~V~slafspdg~~LaSgs~DG~V 780 (784)
++..|++++..|..+...+..-.. . .+....+.+..+.+..++.-|+..+..|.+
T Consensus 239 ~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~ 309 (370)
T 3l6v_A 239 DVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTL 309 (370)
T ss_dssp --------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCE
T ss_pred ccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeE
Confidence 446899999999888887654221 1 222233455555444444455555566654
No 372
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=77.19 E-value=1.6 Score=36.75 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=29.0
Q ss_pred hHHHHHHHHhhcCChHHHHHHHHHhcCCCCCC
Q 047260 11 MLDVYIHDYFLKRKLHASAKAFMTEGKVATDP 42 (784)
Q Consensus 11 ~l~~yiydy~~k~~~~~~a~~~~~e~~~~~~~ 42 (784)
-+|--||-||...|+..+|-+|-+|+++...+
T Consensus 7 evN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~ 38 (90)
T 2xtc_A 7 EVNFLVYRYLQESGFSHSAFTFGIESHISQSN 38 (90)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhcCCccc
Confidence 47889999999999999999999999888654
No 373
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=76.41 E-value=78 Score=33.03 Aligned_cols=229 Identities=10% Similarity=0.066 Sum_probs=122.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCC----ceeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEE---EcCCCCc-----ce
Q 047260 517 SDGKLLASSGHDRKVVLWNMDTL----QTESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRL---WDAANPN-----FC 584 (784)
Q Consensus 517 pdg~~Lasgs~Dg~I~IWd~~t~----~~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~I---Wdl~~~~-----~~ 584 (784)
|+..++++.+.+|.|+--.+... .....++.. +.+..+........|+..+..|.+.- +++.... ..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 56678888999999988765422 111223333 34444444445567777778887554 4443322 01
Q ss_pred e-eec-cCCCCCeEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCee------EE--eec--CCeeEEEEecCCCEEEEE
Q 047260 585 S-QAY-TGHSSPIMSLDFHPK--KTDLFCFCDNDNEIQYWSINPFLC------TH--ITK--GGTAQVRFQPRIGQLLAA 650 (784)
Q Consensus 585 ~-~~~-~~h~~~V~sl~~sp~--~~~ll~sgs~dg~I~iwDl~~~~~------~~--~~~--~~v~~v~fsp~~~~Ll~~ 650 (784)
+ ..+ ......|.++...++ ....++..+.+|.++...+..... +. .+. +.+..+........++..
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEE
Confidence 1 111 112345665543332 233566778899999988753221 11 121 344444444556678899
Q ss_pred ECCCcEEEEECCCC-------eEEEEEeC-CCCCEEEEEEcCCCC-EEEEEe-CCeEEEEeCCC-------CceEEEe--
Q 047260 651 ASDKVVSIFDIETD-------RQTHSLQG-HAELVNYICWDTNGD-YLASVS-QNLVKVWSMAS-------GECIQEL-- 711 (784)
Q Consensus 651 s~Dg~I~IwDl~t~-------~~i~~l~~-h~~~V~sl~~spdg~-~Lasgs-dd~I~IwDl~t-------~~~i~~l-- 711 (784)
+.+|.+..|+...- .-++-+.- ....|.++...+++. .|+..+ .+..+..++.. ++-+..+
T Consensus 162 T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~ 241 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRE 241 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCC
T ss_pred eCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeee
Confidence 99999988876431 11222221 234566654444444 444444 55776666543 2222222
Q ss_pred -ccCCCceEEEEEecCCCEEEEEECCCeEEEEECCC
Q 047260 712 -SSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 712 -~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~ 746 (784)
......+..+....++..++..+..|.+..+++..
T Consensus 242 ~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 242 LKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred cCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 22233455444444455678888888777666554
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=73.43 E-value=93 Score=32.51 Aligned_cols=220 Identities=10% Similarity=-0.025 Sum_probs=112.7
Q ss_pred CCEEEEEeCCCeEEEEcCCCCc-------ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEe---CCCC-----
Q 047260 561 SSQLATASVDKSVRLWDAANPN-------FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWS---INPF----- 625 (784)
Q Consensus 561 g~~Latgs~Dg~I~IWdl~~~~-------~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwD---l~~~----- 625 (784)
...+++.+.+|.|+--.+++-. -....-....+.+..+........+++ -+..|.++... +...
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~-fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILF-FTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEE-EETTSEEEEEEGGGSCBCCSSSC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEE-EeCCCeEEEEEHHHCcCCCccCC
Confidence 3467888899998866533210 000111112334554444444443444 44566655443 3321
Q ss_pred -eeE---Eee--cCCeeEEEEec---CCCEEEEEECCCcEEEEECCCC-------eEEEEEeCCCCCEEEEEEcCCCCEE
Q 047260 626 -LCT---HIT--KGGTAQVRFQP---RIGQLLAAASDKVVSIFDIETD-------RQTHSLQGHAELVNYICWDTNGDYL 689 (784)
Q Consensus 626 -~~~---~~~--~~~v~~v~fsp---~~~~Ll~~s~Dg~I~IwDl~t~-------~~i~~l~~h~~~V~sl~~spdg~~L 689 (784)
..+ ..+ ...+..+...+ +...++.++.+|.|+...+... .....+.....-+.....+.+..++
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 82 GQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLL 161 (327)
T ss_dssp CEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEE
T ss_pred CEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEE
Confidence 111 011 13444443332 4678999999999999886542 2222334333333333344444455
Q ss_pred EEEeCCeEEEEeCC--C---------CceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCce--------E
Q 047260 690 ASVSQNLVKVWSMA--S---------GECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENKS--------M 750 (784)
Q Consensus 690 asgsdd~I~IwDl~--t---------~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~--------~ 750 (784)
+..+.+.+..+... . |.....+. ....|..+...+.+.+++.++..|.++.-.+..-.. .
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~ 240 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVL 240 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEE
Confidence 55556666555544 1 11111222 345577776666677899999999988877543211 1
Q ss_pred --EecccCCceEEEEEeCCCCEEEEEECCCcEEE
Q 047260 751 --TIAAHENIISALAQSPVTGMVASASHDSSVKL 782 (784)
Q Consensus 751 --~~~~h~~~V~slafspdg~~LaSgs~DG~V~I 782 (784)
.+..-.+.+..+....+...|+..+.+|.+.-
T Consensus 241 ~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir 274 (327)
T 3uc1_A 241 TVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIR 274 (327)
T ss_dssp SSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEE
T ss_pred EEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEE
Confidence 22221334555444444455666666776543
No 375
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.36 E-value=1.8e+02 Score=35.23 Aligned_cols=37 Identities=14% Similarity=0.337 Sum_probs=31.0
Q ss_pred CEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEec
Q 047260 676 LVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELS 712 (784)
Q Consensus 676 ~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~ 712 (784)
.+.+++..++..++++.+.| ++|||++.++.++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777788888898888855 99999999999988764
No 376
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=71.94 E-value=1.5e+02 Score=34.43 Aligned_cols=184 Identities=13% Similarity=0.089 Sum_probs=90.1
Q ss_pred CceEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceeeecCCC-------CCCeEEEEEcc-CCCEEEEEeCC-------C
Q 047260 508 SKVTCCHFSSDG-KLLASSGHDRKVVLWNMDTLQTESTPEDH-------KSVVTDVRFRP-NSSQLATASVD-------K 571 (784)
Q Consensus 508 ~~V~~l~fspdg-~~Lasgs~Dg~I~IWd~~t~~~~~~l~~h-------~~~It~i~fsp-dg~~Latgs~D-------g 571 (784)
+.|..|+++|.. ..|+++...+.|..++-. ++.-..+..+ ...|.+|+++| +...++.+... +
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPS-TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETT-TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCC-CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 379999999963 456666666666666532 3332223222 24699999998 43444444321 1
Q ss_pred eEEEEcCCCCc-ceeeeccCC--------CCCeEEEEEcCCCCcEEEEEeCC-CeEEEEeCCC---CeeEEee-------
Q 047260 572 SVRLWDAANPN-FCSQAYTGH--------SSPIMSLDFHPKKTDLFCFCDND-NEIQYWSINP---FLCTHIT------- 631 (784)
Q Consensus 572 ~I~IWdl~~~~-~~~~~~~~h--------~~~V~sl~~sp~~~~ll~sgs~d-g~I~iwDl~~---~~~~~~~------- 631 (784)
...||...++. .-....... ...+.+|+++|.....++.+... ..|. ...+. .+.+..+
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~-~S~DgG~tW~~~~~~~~~~~~~ 180 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLW-RSTDYGVTWSKVESFPNPGTYI 180 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEE-EESSTTSSCEECTTCCCCCCCB
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEE-EeCCCCcceecccCCCCCcccc
Confidence 24555544332 111111111 11246789998766566666533 2232 12221 1111110
Q ss_pred ----------cCCeeEEEEecCC-------CEEEEEECCCcEEEEECC-CCeEEEEEeCC-CC-CEEEEEEcCCCCEEEE
Q 047260 632 ----------KGGTAQVRFQPRI-------GQLLAAASDKVVSIFDIE-TDRQTHSLQGH-AE-LVNYICWDTNGDYLAS 691 (784)
Q Consensus 632 ----------~~~v~~v~fsp~~-------~~Ll~~s~Dg~I~IwDl~-t~~~i~~l~~h-~~-~V~sl~~spdg~~Las 691 (784)
...+..+.++|.. ..++++..++.-.||--. .++.-..+.+. .. ....+.++|++.++++
T Consensus 181 ~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~ 260 (737)
T 2cn3_A 181 YDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYIT 260 (737)
T ss_dssp SCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEE
T ss_pred cCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEE
Confidence 1235667787753 267777665432233332 23333333221 11 2245667777776665
Q ss_pred Ee
Q 047260 692 VS 693 (784)
Q Consensus 692 gs 693 (784)
..
T Consensus 261 ~~ 262 (737)
T 2cn3_A 261 YG 262 (737)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 377
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=70.82 E-value=1.6e+02 Score=34.32 Aligned_cols=180 Identities=4% Similarity=-0.028 Sum_probs=97.7
Q ss_pred EEEE-EcCCCCcEEEEEeCCC----eEEEEeCCCCeeEEe-ecCCe----------eEEEEecCCCEEEEEEC-------
Q 047260 596 MSLD-FHPKKTDLFCFCDNDN----EIQYWSINPFLCTHI-TKGGT----------AQVRFQPRIGQLLAAAS------- 652 (784)
Q Consensus 596 ~sl~-~sp~~~~ll~sgs~dg----~I~iwDl~~~~~~~~-~~~~v----------~~v~fsp~~~~Ll~~s~------- 652 (784)
..+. ++|++..++++-+.+| .|+++|+.+.+.+.. +...+ ..++|..+ ..++.+..
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCBC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCcC
Confidence 3344 7888887777766555 699999998776632 11011 33477644 44444321
Q ss_pred ----CCcEEEEECCCC--eEEEEEeCCCCC-EEEEEEcCCCC-----EEEEEeCC----eEEEEeCCC--CceEEEeccC
Q 047260 653 ----DKVVSIFDIETD--RQTHSLQGHAEL-VNYICWDTNGD-----YLASVSQN----LVKVWSMAS--GECIQELSSN 714 (784)
Q Consensus 653 ----Dg~I~IwDl~t~--~~i~~l~~h~~~-V~sl~~spdg~-----~Lasgsdd----~I~IwDl~t--~~~i~~l~~~ 714 (784)
...|+.|.+-+. +-...+.+.... ...+..++++. .+++.+.+ .+.+.|... ++ +..+...
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 289 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMP 289 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSC
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecC
Confidence 246888887654 223334433333 33455566666 24443322 566767653 33 2333322
Q ss_pred CCceEEEEEecCCCEEEEE----------ECCCeEEEEECCCCc--------eEEec--ccCCceEEEEEeCCCCEEEEE
Q 047260 715 GNQFHSCVFHPSYSTLLVV----------GGISSLELWNMAENK--------SMTIA--AHENIISALAQSPVTGMVASA 774 (784)
Q Consensus 715 ~~~I~sl~fspdg~~L~s~----------s~dg~I~Iwdl~~~~--------~~~~~--~h~~~V~slafspdg~~LaSg 774 (784)
... .+..+.++.+++.. ...+.|.+.|+.+.. ...+. .....+..+.|..+ .++++.
T Consensus 290 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~ 366 (711)
T 4hvt_A 290 SDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLAT 366 (711)
T ss_dssp TTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEE
T ss_pred Ccc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEE
Confidence 221 22344455444432 135678999987631 22222 23446778888865 577777
Q ss_pred ECCCcE
Q 047260 775 SHDSSV 780 (784)
Q Consensus 775 s~DG~V 780 (784)
..++.-
T Consensus 367 ~~~~~~ 372 (711)
T 4hvt_A 367 YDNVVA 372 (711)
T ss_dssp EETTEE
T ss_pred EECCEE
Confidence 777753
No 378
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=70.27 E-value=1e+02 Score=31.73 Aligned_cols=219 Identities=8% Similarity=-0.002 Sum_probs=111.0
Q ss_pred cCCCEEEEEeCCCeEEEEcCCCCccee--------eeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeC---CC---
Q 047260 559 PNSSQLATASVDKSVRLWDAANPNFCS--------QAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSI---NP--- 624 (784)
Q Consensus 559 pdg~~Latgs~Dg~I~IWdl~~~~~~~--------~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl---~~--- 624 (784)
|+..++++.+.+|.|+--.+.+-.... ..+.. .+.+..+........++ ..+..|.++-+.. ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll-~fT~~G~~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHIL-CFSSRGRVYSMKVYQLPEATR 78 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEE-EEETTSEEEEEEGGGSCCCCS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEE-EEECCCEEEEEEhhHCcCCCC
Confidence 345678899999999877665422110 11122 23344444333334344 4455777655543 22
Q ss_pred ---CeeEE---eec--CCeeEEEEe---cCCCEEEEEECCCcEEEEECCC-------CeEEEEEeCCCCCEEEEEE-cCC
Q 047260 625 ---FLCTH---ITK--GGTAQVRFQ---PRIGQLLAAASDKVVSIFDIET-------DRQTHSLQGHAELVNYICW-DTN 685 (784)
Q Consensus 625 ---~~~~~---~~~--~~v~~v~fs---p~~~~Ll~~s~Dg~I~IwDl~t-------~~~i~~l~~h~~~V~sl~~-spd 685 (784)
+..+. .+. ..+..+... .++.+++.++..|.++...+.. +.....+..+ +.+..+.. ..+
T Consensus 79 ~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 79 GARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 11110 111 334444332 3456799999999999987642 2222223334 44444444 344
Q ss_pred CCEEEEEeCCeEEEEeCCC---------CceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCc--------
Q 047260 686 GDYLASVSQNLVKVWSMAS---------GECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENK-------- 748 (784)
Q Consensus 686 g~~Lasgsdd~I~IwDl~t---------~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~-------- 748 (784)
..+++..+.+.+..++... |.....+. .+..|..+....++..+++.+..|.++-.++..-.
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG 236 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKG 236 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCC
T ss_pred CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCC
Confidence 4455555566666665532 11112222 23456666555556679999999988888764321
Q ss_pred eE--EecccCCceEEEEEeCCCCEEEEEECCCcEE
Q 047260 749 SM--TIAAHENIISALAQSPVTGMVASASHDSSVK 781 (784)
Q Consensus 749 ~~--~~~~h~~~V~slafspdg~~LaSgs~DG~V~ 781 (784)
.. .+..-.+.+..+....+..-|+..+.+|.+.
T Consensus 237 ~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~i 271 (307)
T 1zi0_A 237 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLV 271 (307)
T ss_dssp EESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEE
T ss_pred EEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEE
Confidence 11 2222334555544444444455566666543
No 379
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.67 E-value=62 Score=39.21 Aligned_cols=34 Identities=15% Similarity=0.247 Sum_probs=29.3
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc
Q 047260 550 SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF 583 (784)
Q Consensus 550 ~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~ 583 (784)
..|.+++..++..++++-+.|+++|||++.++..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 3567788888889999999999999999998763
No 380
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=62.29 E-value=1.6e+02 Score=31.08 Aligned_cols=225 Identities=9% Similarity=0.060 Sum_probs=113.0
Q ss_pred eEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc----------eeeecc-CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEE
Q 047260 552 VTDVRFRPNSSQLATASVDKSVRLWDAANPNF----------CSQAYT-GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYW 620 (784)
Q Consensus 552 It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~----------~~~~~~-~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iw 620 (784)
|..|+. .....+.-..||.|..|-...... ....+. .....+..+++..-.. ..+.-..||.|+.|
T Consensus 55 i~~i~~--G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~-h~~al~~~G~v~~w 131 (389)
T 3kci_A 55 PVQLIG--GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK-HCLALSSEGEVYSW 131 (389)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCS-EEEEEETTSCEEEE
T ss_pred eEEEEe--CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCC-eEEEEcCCCCEEEE
Confidence 444443 234555567889999995432110 111111 1123344455554433 44455679999999
Q ss_pred eCCCC-----------eeEEeec--CCeeEEEEecCCCEEEEEECCCcEEEEECCCC-----------eEEEEEeC-CCC
Q 047260 621 SINPF-----------LCTHITK--GGTAQVRFQPRIGQLLAAASDKVVSIFDIETD-----------RQTHSLQG-HAE 675 (784)
Q Consensus 621 Dl~~~-----------~~~~~~~--~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~-----------~~i~~l~~-h~~ 675 (784)
-.+.. ....... .....+.+..-..+.++...+|.|+.|-.... .....+.. ...
T Consensus 132 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~ 211 (389)
T 3kci_A 132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH 211 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTS
T ss_pred eCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCC
Confidence 65421 1111111 11122334444567777788999999965321 01111221 234
Q ss_pred CEEEEEEcCC-CCEEEEEeCCeEEEEeCCCC-----------ceEEEecc-CCCceEEEEEecCCCEEEEEECCCeEEEE
Q 047260 676 LVNYICWDTN-GDYLASVSQNLVKVWSMASG-----------ECIQELSS-NGNQFHSCVFHPSYSTLLVVGGISSLELW 742 (784)
Q Consensus 676 ~V~sl~~spd-g~~Lasgsdd~I~IwDl~t~-----------~~i~~l~~-~~~~I~sl~fspdg~~L~s~s~dg~I~Iw 742 (784)
.|..++.... ...++...++.|+.|-.... .....+.. ....|..++... .+.++...+|.|+.|
T Consensus 212 ~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~w 289 (389)
T 3kci_A 212 RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYTW 289 (389)
T ss_dssp CEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEEE
T ss_pred eEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEEE
Confidence 5677766542 23344445669999965321 01112221 122355555443 366677889999999
Q ss_pred ECCCCc------------eEEeccc-CCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 743 NMAENK------------SMTIAAH-ENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 743 dl~~~~------------~~~~~~h-~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
-....- +..+... ...|..|+.. ....+....||.|+.|
T Consensus 290 G~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~w 341 (389)
T 3kci_A 290 GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTW 341 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEE
T ss_pred eCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEe
Confidence 654311 1112111 2346666544 3344445678888887
No 381
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=58.41 E-value=2e+02 Score=30.78 Aligned_cols=163 Identities=10% Similarity=0.166 Sum_probs=88.3
Q ss_pred eEEEEECCCC--ceeeecCC------CCCCeEEEEEc---cC----CCEEEEEe-CCCeEEEEcCCCCcceeeecc----
Q 047260 530 KVVLWNMDTL--QTESTPED------HKSVVTDVRFR---PN----SSQLATAS-VDKSVRLWDAANPNFCSQAYT---- 589 (784)
Q Consensus 530 ~I~IWd~~t~--~~~~~l~~------h~~~It~i~fs---pd----g~~Latgs-~Dg~I~IWdl~~~~~~~~~~~---- 589 (784)
+|.+||+.+. +.++++.- ....+.++++. ++ +.+++.+. ....|.|+|+.+++.. +...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw-Rv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW-NVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE-EEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE-EEccCCCc
Confidence 5888999988 87776642 23467888887 22 33444443 4678999999986622 2111
Q ss_pred CC--------------CCCeEEEEEcCC----CCcEEEEEeCCCeEEEEeC---CC---CeeEEe--ecC---CeeEEEE
Q 047260 590 GH--------------SSPIMSLDFHPK----KTDLFCFCDNDNEIQYWSI---NP---FLCTHI--TKG---GTAQVRF 640 (784)
Q Consensus 590 ~h--------------~~~V~sl~~sp~----~~~ll~sgs~dg~I~iwDl---~~---~~~~~~--~~~---~v~~v~f 640 (784)
.. ...|..|+++|+ ++.+++..-....++--.. +. ...+.. .++ ....+++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 10 236788888887 5555554443333433321 11 111111 112 2234556
Q ss_pred ec-CCCEEEEEECCCcEEEEECCC-C---eEEEEE-eC-CCCCEEEEEEcCCCCEEEEEe
Q 047260 641 QP-RIGQLLAAASDKVVSIFDIET-D---RQTHSL-QG-HAELVNYICWDTNGDYLASVS 693 (784)
Q Consensus 641 sp-~~~~Ll~~s~Dg~I~IwDl~t-~---~~i~~l-~~-h~~~V~sl~~spdg~~Lasgs 693 (784)
.+ +|..+++--....|..|+..+ . .....+ .. .-.....+.+..+|.+.+..+
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 53 444444444578899999875 1 111222 11 223567777777776555543
No 382
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=56.85 E-value=2e+02 Score=30.37 Aligned_cols=229 Identities=9% Similarity=0.053 Sum_probs=117.3
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------ceeeecC-CCCCCeEEEEEccCCCEEEEEeCCCeEEEEc
Q 047260 510 VTCCHFSSDGKLLASSGHDRKVVLWNMDTL-----------QTESTPE-DHKSVVTDVRFRPNSSQLATASVDKSVRLWD 577 (784)
Q Consensus 510 V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~-----------~~~~~l~-~h~~~It~i~fspdg~~Latgs~Dg~I~IWd 577 (784)
|..++.. ....+.-..||.|+.|-.... .....+. .....+..++++......+.-..||.|..|-
T Consensus 55 i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG 132 (389)
T 3kci_A 55 PVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 132 (389)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEE
T ss_pred eEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEe
Confidence 4444432 334555567888888864321 0111111 1223455566666666677778899999995
Q ss_pred CCCCc----------ceeeeccC-CCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC---------ee--EEee----
Q 047260 578 AANPN----------FCSQAYTG-HSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF---------LC--THIT---- 631 (784)
Q Consensus 578 l~~~~----------~~~~~~~~-h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~---------~~--~~~~---- 631 (784)
..... .....+.. ....|..|+... ...+.-..+|.|+.|-.+.. .. ....
T Consensus 133 ~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~ 209 (389)
T 3kci_A 133 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG---AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 209 (389)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECS---SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGT
T ss_pred CCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCc---CeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccC
Confidence 43211 01111111 123566666542 24455567999999975421 00 1111
Q ss_pred cCCeeEEEEecCCCEEEEEECCCcEEEEECCCC-----------eEEEEEeC-CCCCEEEEEEcCCCCEEEEEeCCeEEE
Q 047260 632 KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETD-----------RQTHSLQG-HAELVNYICWDTNGDYLASVSQNLVKV 699 (784)
Q Consensus 632 ~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~-----------~~i~~l~~-h~~~V~sl~~spdg~~Lasgsdd~I~I 699 (784)
...+..++......+.++...||.|+.|-.... .....+.. ....|..|+...+ ..++...++.|+.
T Consensus 210 ~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~-hs~alt~~G~v~~ 288 (389)
T 3kci_A 210 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ-FSVALTKSGAVYT 288 (389)
T ss_dssp TSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT-EEEEEETTSCEEE
T ss_pred CCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC-EEEEEeCCCeEEE
Confidence 123445554433467777788999999964321 11122221 2224666554322 2233344558888
Q ss_pred EeCCCC--------c---eEEEecc-CCCceEEEEEecCCCEEEEEECCCeEEEEECCC
Q 047260 700 WSMASG--------E---CIQELSS-NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 700 wDl~t~--------~---~i~~l~~-~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~ 746 (784)
|-.... . ....+.. ....|..++. ...+.++...||.|+.|-...
T Consensus 289 wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~--G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 289 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIAT--GSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTCCEEEEECCT
T ss_pred EeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEe--ccCeEEEECCCCCEEEeeCCC
Confidence 865321 1 1111221 2234555544 334667778899999997654
No 383
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.23 E-value=1.6e+02 Score=36.42 Aligned_cols=34 Identities=18% Similarity=0.372 Sum_probs=29.5
Q ss_pred ceEEEEEecCCCEEEEEECCCeEEEEECCCCceE
Q 047260 717 QFHSCVFHPSYSTLLVVGGISSLELWNMAENKSM 750 (784)
Q Consensus 717 ~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~~~ 750 (784)
.+.+++..++..++++.+.|++++||++.++.++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v 272 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV 272 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeE
Confidence 4556677788899999999999999999999876
No 384
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=53.49 E-value=2.1e+02 Score=32.43 Aligned_cols=60 Identities=20% Similarity=0.191 Sum_probs=44.5
Q ss_pred CCEEEEEEcCCCCEEEEEeC-------------CeEEEEeCCCCceEEEeccC-CCceEEEEEecCCCEEEEEE
Q 047260 675 ELVNYICWDTNGDYLASVSQ-------------NLVKVWSMASGECIQELSSN-GNQFHSCVFHPSYSTLLVVG 734 (784)
Q Consensus 675 ~~V~sl~~spdg~~Lasgsd-------------d~I~IwDl~t~~~i~~l~~~-~~~I~sl~fspdg~~L~s~s 734 (784)
.....|+|+++|.+.++... +.|..++..+++....+... ...++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999998774321 16777787788766655543 46789999999999887765
No 385
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=53.06 E-value=2.1e+02 Score=29.60 Aligned_cols=185 Identities=10% Similarity=0.067 Sum_probs=97.7
Q ss_pred cCCCEEEEEeCCCeEEEEcCCCC---cceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeC---CC------Ce
Q 047260 559 PNSSQLATASVDKSVRLWDAANP---NFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSI---NP------FL 626 (784)
Q Consensus 559 pdg~~Latgs~Dg~I~IWdl~~~---~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl---~~------~~ 626 (784)
|+..++++.+.+|.|+--.+..- ......+.. .+.+..+........++ ..+..|.++-+.. .. +.
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll-~fT~~Gr~~~~~~~elp~~~r~a~G~ 80 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLL-LFTNKGNYLYCPVHELPDIRWKDLGQ 80 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEE-EEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEE-EEECCCEEEEEEHHHCcCCCCCCCCc
Confidence 56678899999999987654311 111112222 23444444444444344 4555777665544 21 11
Q ss_pred eE---Eeec--CCeeEEEEec---CCCEEEEEECCCcEEEEECCC--------CeEEEEEeCCCCCEEEEEEcC-CCCEE
Q 047260 627 CT---HITK--GGTAQVRFQP---RIGQLLAAASDKVVSIFDIET--------DRQTHSLQGHAELVNYICWDT-NGDYL 689 (784)
Q Consensus 627 ~~---~~~~--~~v~~v~fsp---~~~~Ll~~s~Dg~I~IwDl~t--------~~~i~~l~~h~~~V~sl~~sp-dg~~L 689 (784)
.+ ..+. ..+..+...+ ++.+++.++.+|.++...+.. +.....+... +.+..+.... +..++
T Consensus 81 ~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELF 159 (323)
T ss_dssp EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEE
T ss_pred ChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEE
Confidence 11 0111 2344443323 256799999999999988742 2222223323 4454444443 44455
Q ss_pred EEEeCCeEEEEeCCC-------CceEEEecc-CCCceEEEEEecCCC-EEEEEECCCeEEEEECCC
Q 047260 690 ASVSQNLVKVWSMAS-------GECIQELSS-NGNQFHSCVFHPSYS-TLLVVGGISSLELWNMAE 746 (784)
Q Consensus 690 asgsdd~I~IwDl~t-------~~~i~~l~~-~~~~I~sl~fspdg~-~L~s~s~dg~I~Iwdl~~ 746 (784)
+....+.+..++... ..-+.-+.- .+..|.++...+++. .|++.+..|..+..++..
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 555566666665532 111222221 234566665544455 799999999888777654
No 386
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=48.88 E-value=2.7e+02 Score=29.53 Aligned_cols=264 Identities=9% Similarity=0.056 Sum_probs=128.0
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------ceeeecC-CCCCCeEEEEEccCCCEEEEEeCC-CeEE
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNMDTL-----------QTESTPE-DHKSVVTDVRFRPNSSQLATASVD-KSVR 574 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~-----------~~~~~l~-~h~~~It~i~fspdg~~Latgs~D-g~I~ 574 (784)
..|..|+.- ....+.-..||.|+.|=.... .....+. .....|..|+.-.+ ..+.-..| +.|.
T Consensus 16 ~~v~~ia~G--~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~--ht~al~~~gg~v~ 91 (406)
T 4d9s_A 16 RKVLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD--HTVAYSQSGMEVY 91 (406)
T ss_dssp CCEEEEEEC--SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS--EEEEEETTTTEEE
T ss_pred cceEEEecC--CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcc--eEEEEECCCCEEE
Confidence 346555543 334444567888888854321 0111111 12235777766432 33333445 5899
Q ss_pred EEcCCCCc-----------ceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC----------eeE-Eeec
Q 047260 575 LWDAANPN-----------FCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF----------LCT-HITK 632 (784)
Q Consensus 575 IWdl~~~~-----------~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~----------~~~-~~~~ 632 (784)
.|-..... ............|..|+.. ....+.-..+|.|+.|-.+.. ... ....
T Consensus 92 ~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G---~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~ 168 (406)
T 4d9s_A 92 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG---DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 168 (406)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC---SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECG
T ss_pred EEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC---hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEec
Confidence 99543211 0111111122357777654 234455567999999976421 001 1111
Q ss_pred --CCeeEEEEecCCCEEEEEECCCcEEEEECCCC----------e-EEEEEeC-CCCCEEEEEEcCCCCEEEEEeCCeEE
Q 047260 633 --GGTAQVRFQPRIGQLLAAASDKVVSIFDIETD----------R-QTHSLQG-HAELVNYICWDTNGDYLASVSQNLVK 698 (784)
Q Consensus 633 --~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~----------~-~i~~l~~-h~~~V~sl~~spdg~~Lasgsdd~I~ 698 (784)
.......+..-..+.++...+|.|+.|-.... . ....+.. ....|..|+...+ ..++...++.|+
T Consensus 169 ~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~-ht~~l~~~G~v~ 247 (406)
T 4d9s_A 169 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWR-HTISVSYSGALY 247 (406)
T ss_dssp GGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSS-EEEEEETTCCEE
T ss_pred ccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCC-cEEEEcCCCCEE
Confidence 11122233344456777788999999964321 1 1111111 2235665554322 233334455888
Q ss_pred EEeCCCC-c----------eEEEecc-CCCceEEEEEecCCCEEEEEECCCeEEEEECCCCc------------eEEec-
Q 047260 699 VWSMASG-E----------CIQELSS-NGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENK------------SMTIA- 753 (784)
Q Consensus 699 IwDl~t~-~----------~i~~l~~-~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~------------~~~~~- 753 (784)
.|-.... . ....+.. ....|..++. -..+.++...+|.|+.|-....- ...+.
T Consensus 248 ~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~--G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~ 325 (406)
T 4d9s_A 248 TYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISG--GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRF 325 (406)
T ss_dssp EEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECC
T ss_pred EeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEe--cCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEec
Confidence 8864321 0 1111211 1223444443 34466777888999999654311 11111
Q ss_pred ccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 754 AHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 754 ~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
.....|..|+.. ....+....||.|+.|
T Consensus 326 ~~~~~v~~va~G--~~hs~alt~~G~v~~w 353 (406)
T 4d9s_A 326 PDDQKVVQVSCG--WRHTLAVTERNNVFAW 353 (406)
T ss_dssp GGGCCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred cCCCcEEEEEeC--CCeEEEEeCCCCEEEe
Confidence 123356666544 3344445678888887
No 387
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=47.75 E-value=1.4e+02 Score=33.96 Aligned_cols=57 Identities=14% Similarity=0.052 Sum_probs=41.3
Q ss_pred eEEEEecCCCEEEEEECC------------CcEEEEECCCCeEEEEEeCC-CCCEEEEEEcCCCCEEEEE
Q 047260 636 AQVRFQPRIGQLLAAASD------------KVVSIFDIETDRQTHSLQGH-AELVNYICWDTNGDYLASV 692 (784)
Q Consensus 636 ~~v~fsp~~~~Ll~~s~D------------g~I~IwDl~t~~~i~~l~~h-~~~V~sl~~spdg~~Lasg 692 (784)
--|+|++.|..+++-..+ ..+.+.+..+++..+.+.++ ...++.++|+||++.|++.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 558899998855544322 24666777778777766664 4689999999999988765
No 388
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.74 E-value=3.9e+02 Score=31.08 Aligned_cols=36 Identities=25% Similarity=0.495 Sum_probs=27.0
Q ss_pred CEEEEEEcCCCCEEEEEeCC-eEEEEeCCCCceEEEecc
Q 047260 676 LVNYICWDTNGDYLASVSQN-LVKVWSMASGECIQELSS 713 (784)
Q Consensus 676 ~V~sl~~spdg~~Lasgsdd-~I~IwDl~t~~~i~~l~~ 713 (784)
.|.++.+ +..++++-+.+ ++|+|+++++.++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555554 36687777755 999999999998887754
No 389
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=45.70 E-value=3.7e+02 Score=30.28 Aligned_cols=229 Identities=11% Similarity=0.119 Sum_probs=115.1
Q ss_pred CCCceEEEEEcCCCC-EEEEEeCCCe----------------------------EEEEECCCCceeeecCCC--CCC---
Q 047260 506 RNSKVTCCHFSSDGK-LLASSGHDRK----------------------------VVLWNMDTLQTESTPEDH--KSV--- 551 (784)
Q Consensus 506 H~~~V~~l~fspdg~-~Lasgs~Dg~----------------------------I~IWd~~t~~~~~~l~~h--~~~--- 551 (784)
|...+....|.-||+ -|++...+|+ |.|+|=.+++.+.++.-. .+.
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~~~p~rg~~~~ 256 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVSD 256 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCCGGG
T ss_pred ccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEecccCCCCCCcccc
Confidence 566788888888886 5666766665 788888788777654311 111
Q ss_pred ------------eEEEEEcc-CCCEEEEEe---CCCeEEEEcCCCCccee-ee----------ccCC-CCCeEEEEEcCC
Q 047260 552 ------------VTDVRFRP-NSSQLATAS---VDKSVRLWDAANPNFCS-QA----------YTGH-SSPIMSLDFHPK 603 (784)
Q Consensus 552 ------------It~i~fsp-dg~~Latgs---~Dg~I~IWdl~~~~~~~-~~----------~~~h-~~~V~sl~~sp~ 603 (784)
..++++.- +...++.+- ....|..||.+.++... -. +.+. ...+....+.-|
T Consensus 257 WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgD 336 (591)
T 2zux_A 257 WGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGD 336 (591)
T ss_dssp GTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSS
T ss_pred cccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCC
Confidence 22333321 222333332 12246777776654211 11 1110 123444555666
Q ss_pred CCcEEEEEe----CCCeEEEEeCCCCeeEEeecCCeeEEEEecCC--CEEEEEECCC----cEEEEECCCCeEEEEEeCC
Q 047260 604 KTDLFCFCD----NDNEIQYWSINPFLCTHITKGGTAQVRFQPRI--GQLLAAASDK----VVSIFDIETDRQTHSLQGH 673 (784)
Q Consensus 604 ~~~ll~sgs----~dg~I~iwDl~~~~~~~~~~~~v~~v~fsp~~--~~Ll~~s~Dg----~I~IwDl~t~~~i~~l~~h 673 (784)
|..-|+.++ .||.+ +|...- .|...+....|.|+. -.++.+..++ -..+.|.++++.+......
T Consensus 337 G~dEIv~Gs~~iD~dG~~-L~st~~-----gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~ 410 (591)
T 2zux_A 337 GKDEIIFGSMAVDHDGKG-MYSTGL-----GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAG 410 (591)
T ss_dssp SSCEEEETTEEECTTSCE-EEECSC-----CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCS
T ss_pred CCceEEEeeeEECCCCCE-eeeCCC-----CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCC
Confidence 665555443 34433 444321 222334444567763 3566665541 4567899999998887643
Q ss_pred --CCCEEEEEEcCC--CCEEEEEeCCeEEEEeCCCCceEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCCCc
Q 047260 674 --AELVNYICWDTN--GDYLASVSQNLVKVWSMASGECIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAENK 748 (784)
Q Consensus 674 --~~~V~sl~~spd--g~~Lasgsdd~I~IwDl~t~~~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~~~ 748 (784)
.+......|.|+ |.-+.+ .. .||+.. ++.+.... ....-..+-|..+...-+.- .+.|.-|+...+.
T Consensus 411 ~d~Gr~~~~Didp~~pG~E~w~--~~--~l~~~~-G~~i~~~~-p~~~N~~i~WdGDl~relld--~~~i~k~~~~~~~ 481 (591)
T 2zux_A 411 KDVGRGMAADIDPRYPGQEVWA--NG--SLYSAK-GVKIGSGV-PSSTNFGIWWDGDLLREQLD--SNRIDKWDYQNGV 481 (591)
T ss_dssp SCCCCEEEECCCTTSSSCEEEE--TT--EEECTT-SCBCSSCC-CSCCSEEECCSSSSSCEEEE--TTEEEEEETTTTE
T ss_pred CCCCceeEEecCCCCCceEEEe--cC--ceECCC-CCEecCCC-CCCcceeEEECCCCcHhhhC--CceEEecccCCCc
Confidence 334444445554 223333 22 356643 33332211 11112345566665322222 2368888877665
No 390
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=38.75 E-value=3.8e+02 Score=28.33 Aligned_cols=221 Identities=10% Similarity=0.032 Sum_probs=112.4
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEcCCCCcc------------eeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeE
Q 047260 550 SVVTDVRFRPNSSQLATASVDKSVRLWDAANPNF------------CSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEI 617 (784)
Q Consensus 550 ~~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~~------------~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I 617 (784)
..|..|+.- ....+.-..||.|..|-...... ....+ .....|..|+... ...+.-..+|.|
T Consensus 59 ~~i~~va~G--~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v-~l~~~i~~va~G~---~hs~alt~~G~v 132 (413)
T 1a12_A 59 EDVVQAEAG--GMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQVSAGD---SHTAALTDDGRV 132 (413)
T ss_dssp SCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEEC-CCCSCEEEEEECS---SEEEEEETTSCE
T ss_pred CCeEEEEeC--CCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEe-cCCCcEEEEecCC---CeEEEEcCCCcE
Confidence 556666654 33455556889999996543110 00111 1234576666543 244555678999
Q ss_pred EEEeC--CCCe-------------eEEee-cCCeeEEEEecCCCEEEEEECCCcEEEEECCCC-eE--------------
Q 047260 618 QYWSI--NPFL-------------CTHIT-KGGTAQVRFQPRIGQLLAAASDKVVSIFDIETD-RQ-------------- 666 (784)
Q Consensus 618 ~iwDl--~~~~-------------~~~~~-~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~-~~-------------- 666 (784)
+.|-. +..- ..... ...+..| ..-..+.++...||.|+.|-.... ++
T Consensus 133 ~~wG~~~n~~GqlG~~~~~~~~~~P~~v~~~~~i~~i--a~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~ 210 (413)
T 1a12_A 133 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKV--ASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQ 210 (413)
T ss_dssp EEEECEEETTEEEESSBBTBCEEEEEEECCSSCEEEE--EECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGG
T ss_pred EEeeCCcCCCCccCcCCccccccCCEEecCCCCEEEE--EecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccc
Confidence 99975 2110 11111 1233333 334456777778999999965431 10
Q ss_pred -------EEEEeC------CCCCEEEEEEcCCCCEEEEEeCCeEEEEeCCCC-c----------eEEEeccC-C--CceE
Q 047260 667 -------THSLQG------HAELVNYICWDTNGDYLASVSQNLVKVWSMASG-E----------CIQELSSN-G--NQFH 719 (784)
Q Consensus 667 -------i~~l~~------h~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t~-~----------~i~~l~~~-~--~~I~ 719 (784)
...+.. ....|..|+...+ ..++...++.|+.|-.... . ....+... . ..|.
T Consensus 211 ~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~-hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~ 289 (413)
T 1a12_A 211 GLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY-FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWV 289 (413)
T ss_dssp GHHHHHSCEECCCBCSSCCSBCCEEEEEEETT-EEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEE
T ss_pred cccccccCceEeeccccccCCccEEEEEeCCC-EEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEE
Confidence 001110 1235666655433 2333344668888865431 0 11112111 1 2355
Q ss_pred EEEEecCCCEEEEEECCCeEEEEECCCC----------ce--EEecccCCceEEEEEeCCCCEEEEEECCCcEEEe
Q 047260 720 SCVFHPSYSTLLVVGGISSLELWNMAEN----------KS--MTIAAHENIISALAQSPVTGMVASASHDSSVKLW 783 (784)
Q Consensus 720 sl~fspdg~~L~s~s~dg~I~Iwdl~~~----------~~--~~~~~h~~~V~slafspdg~~LaSgs~DG~V~IW 783 (784)
.++. ...+.++...+|.|+.|-.... .. .........|..|+... ...+....||.|+.|
T Consensus 290 ~ia~--G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~G~--~hs~alt~~G~v~~w 361 (413)
T 1a12_A 290 GFSG--GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGA--SVGYAVTKDGRVFAW 361 (413)
T ss_dssp EEEE--CSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEECS--SEEEEEETTSCEEEE
T ss_pred EEec--ccceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecccCceeEEEECc--ceEEEEeCCCCEEEe
Confidence 4444 3346677778899999965321 11 11122223566666543 344445678888887
No 391
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=37.47 E-value=3.9e+02 Score=28.20 Aligned_cols=225 Identities=8% Similarity=-0.056 Sum_probs=112.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-------------eeeecCCCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q 047260 509 KVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQ-------------TESTPEDHKSVVTDVRFRPNSSQLATASVDKSVRL 575 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~-------------~~~~l~~h~~~It~i~fspdg~~Latgs~Dg~I~I 575 (784)
.|..|+.. +...+.-..||.|+.|-....- ....+ .....|..|+.. ....+.-..||.|..
T Consensus 76 ~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v-~~~~~i~~va~G--~~hs~al~~~G~v~~ 150 (423)
T 3mvd_K 76 DAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLI-DLPGKALCISAG--DSHSACLLEDGRVFA 150 (423)
T ss_dssp SEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEEC-CCSSCEEEEEEC--SSEEEEEETTSCEEE
T ss_pred CceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEE-cCCCCEEEEEcC--cCeEEEEeCCCeEEE
Confidence 36555543 4455666788999999654210 01111 123456666654 334555578999999
Q ss_pred EcC--CCCcce---------eeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC-------------------
Q 047260 576 WDA--ANPNFC---------SQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF------------------- 625 (784)
Q Consensus 576 Wdl--~~~~~~---------~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~------------------- 625 (784)
|-. .....+ ..........|..|+... ...+.-..+|.|+.|-.+..
T Consensus 151 wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~ 227 (423)
T 3mvd_K 151 WGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGA---DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGK 227 (423)
T ss_dssp EECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECS---SEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTT
T ss_pred EeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCC---CeEEEEecCCeEEEeeCCcCCccCCCccccccccccccc
Confidence 975 221110 011111234566666543 24455567999999964321
Q ss_pred ------eeEEeec-CCeeEEEEecCCCEEEEE-ECCCcEEEEECCC-----------CeEEEEEeCCCCCEEEEEEcCCC
Q 047260 626 ------LCTHITK-GGTAQVRFQPRIGQLLAA-ASDKVVSIFDIET-----------DRQTHSLQGHAELVNYICWDTNG 686 (784)
Q Consensus 626 ------~~~~~~~-~~v~~v~fsp~~~~Ll~~-s~Dg~I~IwDl~t-----------~~~i~~l~~h~~~V~sl~~spdg 686 (784)
..+.... ..+..++.. ..+.++. ..++.|+.|-... .............|..|+... .
T Consensus 228 ~~~~~p~~v~~~~~~~v~~i~~g--~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~-~ 304 (423)
T 3mvd_K 228 RDLLRPTQLIITRAKPFEAIWAT--NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQ-H 304 (423)
T ss_dssp TTTSSCEEECCTTCCCEEEEEEE--TTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECS-S
T ss_pred ccccCCeEEeecCCccEEEEEEC--CcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEccc-C
Confidence 0011000 223333332 2233333 4688888886432 111111111234566665432 2
Q ss_pred CEEEEEeCCeEEEEeCCCC---------c---eEEEeccCCCceEEEEEecCCCEEEEEECCCeEEEEECCC
Q 047260 687 DYLASVSQNLVKVWSMASG---------E---CIQELSSNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 687 ~~Lasgsdd~I~IwDl~t~---------~---~i~~l~~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~ 746 (784)
..++...++.|+.|-.... . ....+......|..++.... +.++...+|.|+.|=...
T Consensus 305 ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~--hs~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 305 HTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEV--CSYAVTIDGKLYSWGSGV 374 (423)
T ss_dssp EEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETT--EEEEEETTSCEEEEECCT
T ss_pred eEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCC--eEEEEcCCCCEEEECCCC
Confidence 2334444568888864321 1 11222222335666665543 566668899999996554
No 392
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=36.44 E-value=72 Score=39.50 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=27.3
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEcCCCCc
Q 047260 551 VVTDVRFRPNSSQLATASVDKSVRLWDAANPN 582 (784)
Q Consensus 551 ~It~i~fspdg~~Latgs~Dg~I~IWdl~~~~ 582 (784)
.|.+++..++..++++-+.|+++|||++.++.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 45566677788899999999999999999876
No 393
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=36.27 E-value=2e+02 Score=24.55 Aligned_cols=59 Identities=7% Similarity=-0.032 Sum_probs=28.1
Q ss_pred CEEEEEECCCcEEEEECCCCeEEEEEeCC-CCCEEEEEEcCCCCEEEEEeCCeEEEEeCCC
Q 047260 645 GQLLAAASDKVVSIFDIETDRQTHSLQGH-AELVNYICWDTNGDYLASVSQNLVKVWSMAS 704 (784)
Q Consensus 645 ~~Ll~~s~Dg~I~IwDl~t~~~i~~l~~h-~~~V~sl~~spdg~~Lasgsdd~I~IwDl~t 704 (784)
.+.+.-..||.+.+|+...+..+..-... ...-..+.+..+|.+++...++.+ +|...+
T Consensus 25 ~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~S~t 84 (113)
T 3mez_B 25 DYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFVSNT 84 (113)
T ss_dssp TEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEECSC
T ss_pred CEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEECCC
Confidence 34444444555555554323333322111 112234667778887776444443 676544
No 394
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=32.18 E-value=6.4e+02 Score=29.05 Aligned_cols=59 Identities=10% Similarity=0.201 Sum_probs=34.0
Q ss_pred CeEEEEEccC-CCEEEEEeCCCeEEEEcCCCCcceeeeccCC-------CCCeEEEEEcCCCC-cEEEEE
Q 047260 551 VVTDVRFRPN-SSQLATASVDKSVRLWDAANPNFCSQAYTGH-------SSPIMSLDFHPKKT-DLFCFC 611 (784)
Q Consensus 551 ~It~i~fspd-g~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h-------~~~V~sl~~sp~~~-~ll~sg 611 (784)
.|..|+++|. ...|+++...+.|..++-.. +.-.. +..+ ...|.+|+++|... .+++..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G-~tW~~-i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPST-ETWIP-LLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTT-TEEEE-CCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCC-CCEEE-CcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 7999999995 35566676666655554222 21111 2111 24589999999544 344443
No 395
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=30.42 E-value=99 Score=35.22 Aligned_cols=59 Identities=17% Similarity=0.182 Sum_probs=41.8
Q ss_pred ceEEEEEcCCCCEEEEEeCC------------CeEEEEECCCCceeeecCCC-CCCeEEEEEccCCCEEEEE
Q 047260 509 KVTCCHFSSDGKLLASSGHD------------RKVVLWNMDTLQTESTPEDH-KSVVTDVRFRPNSSQLATA 567 (784)
Q Consensus 509 ~V~~l~fspdg~~Lasgs~D------------g~I~IWd~~t~~~~~~l~~h-~~~It~i~fspdg~~Latg 567 (784)
..--|+|++.|+++++-..+ ..+.+.+..+++....+... ...++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34668999999866653322 23566677777776666554 3679999999999888775
No 396
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=28.31 E-value=1.5e+02 Score=33.53 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=43.4
Q ss_pred CceEEEEEcCCCCEEEEEeC------------CCeEEEEECCCCceeeecCCC-CCCeEEEEEccCCCEEEEEe
Q 047260 508 SKVTCCHFSSDGKLLASSGH------------DRKVVLWNMDTLQTESTPEDH-KSVVTDVRFRPNSSQLATAS 568 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~------------Dg~I~IWd~~t~~~~~~l~~h-~~~It~i~fspdg~~Latgs 568 (784)
.....|.|.++|.+.++... ...|..++..+++....+... ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34778999999987663221 125777777778776666443 35689999999999887763
No 397
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=24.37 E-value=89 Score=36.44 Aligned_cols=37 Identities=14% Similarity=0.392 Sum_probs=30.0
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeecC
Q 047260 508 SKVTCCHFSSDGKLLASSGHDRKVVLWNMDTLQTESTPE 546 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~Dg~I~IWd~~t~~~~~~l~ 546 (784)
..|.|+.+ +..+|++-+.|.++|+|++.++.++....
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 34666665 36799999999999999999998877654
No 398
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=24.14 E-value=5.3e+02 Score=25.48 Aligned_cols=174 Identities=10% Similarity=-0.041 Sum_probs=84.8
Q ss_pred CEEEEEeCCCeEEEEcCCCCcceeeeccCCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-------CeeE---Eee
Q 047260 562 SQLATASVDKSVRLWDAANPNFCSQAYTGHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINP-------FLCT---HIT 631 (784)
Q Consensus 562 ~~Latgs~Dg~I~IWdl~~~~~~~~~~~~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~-------~~~~---~~~ 631 (784)
..+++.+.+|.|+--...........+... +.+..+........+++ .+..|.++-+.... +..+ ..+
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~-~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L 80 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVF-VDSTGRSYAIDPITLPSARGQGEPLTGKLTL 80 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEE-EETTSEEEEECGGGSCCSSSCCEEGGGTCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEE-EeCCCeEEEEEHHHCCCcCCCCeEeeeeecC
Confidence 356677788888766544321111122333 34444433333333444 45577766654421 1110 011
Q ss_pred --cCCeeEEEEecCCCEEEEEECCCcEEEEECCC-------CeEEEEEeCCCCCEEEEEEc--CCCCEEEEEeCCeEEEE
Q 047260 632 --KGGTAQVRFQPRIGQLLAAASDKVVSIFDIET-------DRQTHSLQGHAELVNYICWD--TNGDYLASVSQNLVKVW 700 (784)
Q Consensus 632 --~~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t-------~~~i~~l~~h~~~V~sl~~s--pdg~~Lasgsdd~I~Iw 700 (784)
...+..+....++.+|+.++..|.++...+.. +.....+.. .+.+..+... .+..+++....+.+..+
T Consensus 81 ~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf 159 (256)
T 1zvt_A 81 PPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMF 159 (256)
T ss_dssp CTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred CCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEE
Confidence 13444543334566788999999999988732 233333433 2344444444 33344444556677777
Q ss_pred eCCCC------ceEEEecc-------CCCceEEEEEecCCCEEEEEECCCe
Q 047260 701 SMASG------ECIQELSS-------NGNQFHSCVFHPSYSTLLVVGGISS 738 (784)
Q Consensus 701 Dl~t~------~~i~~l~~-------~~~~I~sl~fspdg~~L~s~s~dg~ 738 (784)
+...- .=+..+.- ....|.++...+.+..|+++...+.
T Consensus 160 ~~~ei~~~gRa~GV~~i~L~~~~~k~~~d~Vv~~~~~~~~~~l~~~~g~~k 210 (256)
T 1zvt_A 160 PVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRK 210 (256)
T ss_dssp EGGGSCBCSSBSCEESSCCCHHHHHTTSSCEEEEEEEC-CCEEEEEETTEE
T ss_pred EHHHCCCcCccCCeEEEEcccccCCCCCCEEEEEEEECCCCEEEEEeCcce
Confidence 66421 11222221 3345666654444455555544444
No 399
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=23.48 E-value=72 Score=26.22 Aligned_cols=32 Identities=9% Similarity=0.215 Sum_probs=28.3
Q ss_pred HhHHHHHHHHhhcCChHHHHHHHHHhcCCCCC
Q 047260 10 KMLDVYIHDYFLKRKLHASAKAFMTEGKVATD 41 (784)
Q Consensus 10 ~~l~~yiydy~~k~~~~~~a~~~~~e~~~~~~ 41 (784)
.+++.-|-|||.=.+|.=|..-|.-|++.+..
T Consensus 19 rLi~~LVrEyLef~~l~~TlsVf~pEs~l~~~ 50 (82)
T 2d68_A 19 RLVASLVAEFLQFFNLDFTLAVFQPETSTLQG 50 (82)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHHHHHcCCcchHHhhhhccCCCCC
Confidence 47899999999999999999999999988753
No 400
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=22.74 E-value=3.4e+02 Score=22.77 Aligned_cols=24 Identities=13% Similarity=0.387 Sum_probs=14.4
Q ss_pred EEEEcCCCCEEEEEeCCeEEEEeCC
Q 047260 679 YICWDTNGDYLASVSQNLVKVWSMA 703 (784)
Q Consensus 679 sl~~spdg~~Lasgsdd~I~IwDl~ 703 (784)
.+.+..||.+++...++. .||...
T Consensus 54 ~L~l~~dGnLvL~d~~~~-~vWss~ 77 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDSSGR-SLWASH 77 (105)
T ss_dssp EEEECTTSCEEEECTTCC-EEEECC
T ss_pred EEEEeCCccEEEECCCcE-EEEEec
Confidence 466777887766544433 367644
No 401
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.41 E-value=3.6e+02 Score=22.91 Aligned_cols=14 Identities=7% Similarity=0.211 Sum_probs=7.8
Q ss_pred EEEEECCCcEEEEE
Q 047260 647 LLAAASDKVVSIFD 660 (784)
Q Consensus 647 Ll~~s~Dg~I~IwD 660 (784)
.++--.||.+.+|+
T Consensus 92 ~~~L~~dGnlvly~ 105 (113)
T 3mez_B 92 VLILQINGQAVVYG 105 (113)
T ss_dssp EEEECTTSCEEEEC
T ss_pred EEEEcCCceEEEec
Confidence 44444566666664
No 402
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=22.31 E-value=6.9e+02 Score=26.17 Aligned_cols=227 Identities=9% Similarity=0.123 Sum_probs=112.2
Q ss_pred CceEEEEEcCCCCEEEEEeCC-CeEEEEECCCC--------c---eeeecC-CCCCCeEEEEEccCCCEEEEEeCCCeEE
Q 047260 508 SKVTCCHFSSDGKLLASSGHD-RKVVLWNMDTL--------Q---TESTPE-DHKSVVTDVRFRPNSSQLATASVDKSVR 574 (784)
Q Consensus 508 ~~V~~l~fspdg~~Lasgs~D-g~I~IWd~~t~--------~---~~~~l~-~h~~~It~i~fspdg~~Latgs~Dg~I~ 574 (784)
..|..++...+ +.+.-..| +.|+.|-.... . ....+. .....|..|+.- ....+.-..||.|.
T Consensus 68 ~~i~~va~G~~--ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~v~ 143 (406)
T 4d9s_A 68 HQIVSVTCGAD--HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEVQ 143 (406)
T ss_dssp SCEEEEEECSS--EEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEE
T ss_pred CCEEEEEeCcc--eEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCcEE
Confidence 35766665433 33333444 58999864321 0 001111 122357666654 34555567899999
Q ss_pred EEcCCCCcc----------eeeecc-CCCCCeEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC----------eeE-Eeec
Q 047260 575 LWDAANPNF----------CSQAYT-GHSSPIMSLDFHPKKTDLFCFCDNDNEIQYWSINPF----------LCT-HITK 632 (784)
Q Consensus 575 IWdl~~~~~----------~~~~~~-~h~~~V~sl~~sp~~~~ll~sgs~dg~I~iwDl~~~----------~~~-~~~~ 632 (784)
.|-...... ....+. .....|..|+... ...+.-..+|.|+.|-.+.. ... ....
T Consensus 144 ~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~ 220 (406)
T 4d9s_A 144 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA---EHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT 220 (406)
T ss_dssp EEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECS---SEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECC
T ss_pred EeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCC---CeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEec
Confidence 996543211 111111 1123566666543 24455567999999965421 111 1111
Q ss_pred ----CCeeEEEEecCCCEEEEEECCCcEEEEECCCC-----------eEEEEEeC-CCCCEEEEEEcCCCCEEEEEeCCe
Q 047260 633 ----GGTAQVRFQPRIGQLLAAASDKVVSIFDIETD-----------RQTHSLQG-HAELVNYICWDTNGDYLASVSQNL 696 (784)
Q Consensus 633 ----~~v~~v~fsp~~~~Ll~~s~Dg~I~IwDl~t~-----------~~i~~l~~-h~~~V~sl~~spdg~~Lasgsdd~ 696 (784)
..+.. +..-..+.++...+|.|+.|-.... .....+.. ....|..|+... ...++...++.
T Consensus 221 ~~~~~~i~~--va~G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~-~hs~alt~~G~ 297 (406)
T 4d9s_A 221 STGGEKMSM--VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW-RHTMALTSDGK 297 (406)
T ss_dssp CSTTCCEEE--EEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECS-SEEEEEETTSC
T ss_pred ccCCceEEE--EEECCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecC-CEEEEEcCCCe
Confidence 22333 3334456677778899999964321 11112221 223466555432 22333444558
Q ss_pred EEEEeCCCC-c----------eEEEec-cCCCceEEEEEecCCCEEEEEECCCeEEEEECCC
Q 047260 697 VKVWSMASG-E----------CIQELS-SNGNQFHSCVFHPSYSTLLVVGGISSLELWNMAE 746 (784)
Q Consensus 697 I~IwDl~t~-~----------~i~~l~-~~~~~I~sl~fspdg~~L~s~s~dg~I~Iwdl~~ 746 (784)
|+.|-.... . ....+. .....|..++. -..+.++...+|.|+.|=...
T Consensus 298 v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~--G~~hs~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 298 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSC--GWRHTLAVTERNNVFAWGRGT 357 (406)
T ss_dssp EEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEE--CSSEEEEEETTSCEEEEECCT
T ss_pred EEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEe--CCCeEEEEeCCCCEEEecCCC
Confidence 888864321 0 011111 12234554444 334677778889999996543
No 403
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.51 E-value=2.5e+02 Score=23.94 Aligned_cols=23 Identities=13% Similarity=0.283 Sum_probs=13.1
Q ss_pred EEEEcCCCCEEEEEeCCeEEEEe
Q 047260 679 YICWDTNGDYLASVSQNLVKVWS 701 (784)
Q Consensus 679 sl~~spdg~~Lasgsdd~I~IwD 701 (784)
.+.+..+|.+++...++.+.+|.
T Consensus 53 ~l~l~~dGNLVl~~~~~~~~vW~ 75 (111)
T 3mez_A 53 TLRLNNRGQLEIHSANSNTPVWV 75 (111)
T ss_dssp EEEECTTSCEEEECSSCSSCSEE
T ss_pred EEEEcCCCcEEEEeCCCCEEEEE
Confidence 45666777766654444444664
Done!