BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047271
         (104 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q93ZR6|WSD1_ARATH O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
          Length = 481

 Score = 90.1 bits (222), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/85 (49%), Positives = 58/85 (68%)

Query: 4   AIAHRVLSNTTMAFSNVVGPLEEISFYGHPMAYLAPSVYGHPHALTIHFQSYVNKMTFCV 63
           A   R+  +T++AFSNV GP EEISF+ HP++Y+A S      AL IHF SYV+K+   +
Sbjct: 384 AFGKRIFGHTSLAFSNVKGPDEEISFFHHPISYIAGSALVGAQALNIHFISYVDKIVINL 443

Query: 64  AVDPNVIPDPHLLCKDIEESLKVIK 88
           AVD   I DP+ LC D+ E+L++IK
Sbjct: 444 AVDTTTIQDPNRLCDDMVEALEIIK 468


>sp|Q8GGG1|WSD_ACIAD O-acyltransferase WSD OS=Acinetobacter sp. (strain ADP1)
           GN=wax-dgaT PE=1 SV=1
          Length = 458

 Score = 32.3 bits (72), Expect = 0.80,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 15  MAFSNVVGPLEEISFYGHPMAYLAP-SVYGHPHALTIHFQSYVNKMTFCVAVDPNVIPDP 73
           +  SNV GP E + + G  +  L P S+     AL I   SY++K+   +    N +P  
Sbjct: 371 LVISNVPGPREPLYWNGAKLDALYPASIVLDGQALNITMTSYLDKLEVGLIACRNALPRM 430

Query: 74  HLLCKDIEESLKVIKDCVVER 94
             L   +EE +++ +  + ++
Sbjct: 431 QNLLTHLEEEIQLFEGVIAKQ 451


>sp|Q8Z9J5|RLUA_SALTI Ribosomal large subunit pseudouridine synthase A OS=Salmonella
           typhi GN=rluA PE=3 SV=3
          Length = 219

 Score = 30.4 bits (67), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 28  SFYGHPMAY-LAPSVYGHPHALTIHFQSYVNKMTFCVAVD 66
            FY  P A  LAP +  H   LTI   +Y N MTF V  D
Sbjct: 179 QFYASPEALSLAPRLQLHAEMLTITHPAYGNSMTFKVPAD 218


>sp|Q8ZRV9|RLUA_SALTY Ribosomal large subunit pseudouridine synthase A OS=Salmonella
           typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
           GN=rluA PE=3 SV=3
          Length = 219

 Score = 30.4 bits (67), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 28  SFYGHPMAY-LAPSVYGHPHALTIHFQSYVNKMTFCVAVD 66
            FY  P A  LAP +  H   LTI   +Y N MTF V  D
Sbjct: 179 RFYASPEALSLAPRLQLHAEMLTITHPAYGNSMTFKVPAD 218


>sp|P17377|RDRP_REOVJ RNA-directed RNA polymerase lambda-3 OS=Reovirus type 2 (strain
          D5/Jones) GN=L1 PE=3 SV=1
          Length = 1267

 Score = 30.4 bits (67), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%)

Query: 18 SNVVGPLEEISFYGHPMAYLAPSVYGHPHALTIHFQSYVNKM 59
          S+V   L+EI F+ H   ++ P++Y  P   + ++   +N++
Sbjct: 40 SDVYKALDEIPFHDHATVHIPPTIYSKPSHDSYYYVDALNRV 81


>sp|P34315|NCX6_CAEEL Putative sodium/calcium exchanger 6 OS=Caenorhabditis elegans
           GN=ncx-6 PE=3 SV=3
          Length = 590

 Score = 29.3 bits (64), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 1   VAAAIAHRVLSNTTMAFSNVVGPL---EEISFYGHPMAYLAPSVYGHPHALTIHF 52
           V + ++H VL  T +A+SN +G L     ++  G+P   +A ++ G    L I F
Sbjct: 459 VVSRVSHEVLGLTILAWSNSIGDLIADVSVAKQGYPRMAMAAAIGGQLFNLLIGF 513


>sp|P34050|VP43_NPVAC 43 kDa protein OS=Autographa californica nuclear polyhedrosis virus
           GN=P43 PE=4 SV=1
          Length = 363

 Score = 29.3 bits (64), Expect = 7.6,   Method: Composition-based stats.
 Identities = 10/18 (55%), Positives = 15/18 (83%)

Query: 69  VIPDPHLLCKDIEESLKV 86
           ++ +PHLLCKDI  ++KV
Sbjct: 207 IVDNPHLLCKDINVAIKV 224


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.137    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,505,208
Number of Sequences: 539616
Number of extensions: 1543365
Number of successful extensions: 2816
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2813
Number of HSP's gapped (non-prelim): 8
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)