Query 047275
Match_columns 319
No_of_seqs 123 out of 1952
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 09:27:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047275.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047275hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 6.4E-38 1.4E-42 287.7 29.3 311 2-318 30-348 (485)
2 KOG0254 Predicted transporter 100.0 3.3E-35 7.2E-40 279.1 26.7 278 36-318 90-372 (513)
3 TIGR00887 2A0109 phosphate:H+ 100.0 3.6E-32 7.8E-37 257.9 22.7 281 33-316 54-376 (502)
4 PF00083 Sugar_tr: Sugar (and 100.0 1.1E-36 2.3E-41 285.0 -15.5 280 35-318 46-329 (451)
5 PRK10077 xylE D-xylose transpo 100.0 1.5E-29 3.1E-34 238.6 30.2 280 32-317 52-348 (479)
6 TIGR01299 synapt_SV2 synaptic 100.0 6.1E-30 1.3E-34 248.6 27.2 234 33-268 200-474 (742)
7 PRK10642 proline/glycine betai 100.0 3.3E-28 7.1E-33 230.1 25.2 248 41-313 63-324 (490)
8 TIGR00898 2A0119 cation transp 100.0 3.5E-28 7.7E-33 230.7 22.8 267 34-315 126-395 (505)
9 PRK10406 alpha-ketoglutarate t 100.0 1E-26 2.2E-31 216.7 25.4 235 41-313 69-317 (432)
10 KOG0255 Synaptic vesicle trans 100.0 1.4E-26 2.9E-31 220.8 25.9 267 33-315 116-390 (521)
11 TIGR00879 SP MFS transporter, 100.0 6.3E-26 1.4E-30 212.5 29.4 282 33-316 69-360 (481)
12 PRK09952 shikimate transporter 100.0 3.7E-26 8.1E-31 213.2 24.2 239 43-313 72-324 (438)
13 KOG0253 Synaptic vesicle trans 99.9 5.8E-26 1.3E-30 196.9 21.0 275 34-315 112-421 (528)
14 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.5E-25 5.4E-30 206.0 23.5 267 32-307 40-311 (412)
15 KOG0252 Inorganic phosphate tr 99.9 4.2E-27 9.1E-32 209.5 10.3 307 4-317 54-390 (538)
16 COG2814 AraJ Arabinose efflux 99.9 2E-25 4.3E-30 199.8 20.6 252 16-316 35-287 (394)
17 TIGR00891 2A0112 putative sial 99.9 6.2E-24 1.3E-28 195.3 26.6 269 32-314 44-313 (405)
18 PRK15075 citrate-proton sympor 99.9 4.2E-24 9.2E-29 199.2 24.1 231 47-313 68-312 (434)
19 PRK12307 putative sialic acid 99.9 1.1E-23 2.4E-28 195.7 23.1 256 33-315 51-306 (426)
20 TIGR00903 2A0129 major facilit 99.9 3.6E-23 7.8E-28 188.5 22.1 244 12-305 9-253 (368)
21 PRK14995 methyl viologen resis 99.9 2.8E-23 6E-28 196.8 21.0 286 16-315 28-335 (495)
22 PRK11551 putative 3-hydroxyphe 99.9 1E-22 2.2E-27 188.0 23.5 246 32-313 47-293 (406)
23 TIGR00895 2A0115 benzoate tran 99.9 1.6E-22 3.4E-27 185.3 22.4 269 32-308 49-318 (398)
24 PRK09556 uhpT sugar phosphate 99.9 6.6E-23 1.4E-27 192.9 19.1 271 14-310 49-329 (467)
25 TIGR00711 efflux_EmrB drug res 99.9 5.9E-23 1.3E-27 193.8 18.2 275 33-316 35-332 (485)
26 TIGR00883 2A0106 metabolite-pr 99.9 3.2E-22 7E-27 182.9 22.5 235 44-312 44-292 (394)
27 PRK03545 putative arabinose tr 99.9 3.4E-22 7.3E-27 183.8 22.1 242 17-308 32-274 (390)
28 PRK09705 cynX putative cyanate 99.9 3.3E-22 7.1E-27 184.1 21.4 250 14-315 29-280 (393)
29 TIGR00890 2A0111 Oxalate/Forma 99.9 3.1E-22 6.8E-27 181.9 20.4 244 32-315 35-280 (377)
30 TIGR00893 2A0114 d-galactonate 99.9 2.2E-22 4.7E-27 183.7 19.0 255 32-306 26-282 (399)
31 PRK10091 MFS transport protein 99.9 8E-22 1.7E-26 180.8 21.8 249 16-315 25-275 (382)
32 PF07690 MFS_1: Major Facilita 99.9 3.7E-22 8E-27 180.0 19.0 251 32-314 29-282 (352)
33 PRK11663 regulatory protein Uh 99.9 1E-21 2.3E-26 183.1 21.6 248 32-302 55-306 (434)
34 PRK11102 bicyclomycin/multidru 99.9 2E-21 4.4E-26 177.5 22.1 257 14-314 11-269 (377)
35 TIGR00710 efflux_Bcr_CflA drug 99.9 2.2E-21 4.7E-26 177.5 22.0 244 32-315 37-282 (385)
36 PRK03893 putative sialic acid 99.9 8.4E-21 1.8E-25 179.8 26.1 277 32-313 52-349 (496)
37 PRK03699 putative transporter; 99.9 2.7E-21 5.8E-26 178.1 21.8 251 14-313 27-279 (394)
38 TIGR00894 2A0114euk Na(+)-depe 99.9 1.1E-21 2.4E-26 184.5 19.3 252 30-305 71-327 (465)
39 TIGR00886 2A0108 nitrite extru 99.9 1E-21 2.2E-26 178.6 18.1 254 32-312 34-298 (366)
40 PRK10213 nepI ribonucleoside t 99.9 3.9E-21 8.4E-26 177.0 22.0 231 32-307 52-284 (394)
41 TIGR00881 2A0104 phosphoglycer 99.9 1.1E-21 2.3E-26 178.5 15.8 251 32-303 27-280 (379)
42 TIGR00900 2A0121 H+ Antiporter 99.9 1E-20 2.3E-25 171.2 22.1 247 33-314 32-286 (365)
43 KOG2533 Permease of the major 99.9 3.2E-21 7E-26 179.6 19.1 266 30-312 76-350 (495)
44 PRK15403 multidrug efflux syst 99.9 1.1E-20 2.5E-25 174.9 22.3 148 32-182 48-196 (413)
45 PLN00028 nitrate transmembrane 99.9 8E-21 1.7E-25 179.0 20.9 243 32-305 68-318 (476)
46 KOG2532 Permease of the major 99.9 4.4E-21 9.5E-26 178.2 18.6 253 29-305 67-324 (466)
47 PRK10473 multidrug efflux syst 99.9 2.8E-20 6.2E-25 171.0 22.9 242 33-315 36-279 (392)
48 PRK11273 glpT sn-glycerol-3-ph 99.9 1.9E-20 4.2E-25 175.4 21.9 252 32-306 60-322 (452)
49 PRK15402 multidrug efflux syst 99.9 6.9E-20 1.5E-24 169.3 22.8 245 32-315 45-291 (406)
50 PRK10504 putative transporter; 99.9 6.7E-20 1.5E-24 172.6 22.8 274 33-316 43-338 (471)
51 PRK10133 L-fucose transporter; 99.9 1E-19 2.2E-24 169.7 23.2 112 32-143 58-172 (438)
52 PRK15034 nitrate/nitrite trans 99.9 8.6E-20 1.9E-24 168.7 21.5 241 32-317 67-328 (462)
53 PRK11043 putative transporter; 99.9 1.3E-19 2.8E-24 167.2 22.3 234 32-308 38-271 (401)
54 TIGR00712 glpT glycerol-3-phos 99.9 4.3E-20 9.2E-25 172.4 19.1 253 32-305 58-317 (438)
55 TIGR00805 oat sodium-independe 99.9 1.2E-20 2.7E-25 182.6 15.6 263 30-305 63-397 (633)
56 COG2271 UhpC Sugar phosphate p 99.8 8E-20 1.7E-24 162.4 18.4 259 32-309 61-324 (448)
57 TIGR00896 CynX cyanate transpo 99.8 3E-19 6.5E-24 162.0 21.1 251 14-313 20-271 (355)
58 PRK05122 major facilitator sup 99.8 6.2E-19 1.3E-23 162.5 22.3 135 32-169 48-190 (399)
59 PRK11195 lysophospholipid tran 99.8 4.4E-19 9.5E-24 163.3 20.9 240 34-311 37-277 (393)
60 TIGR00885 fucP L-fucose:H+ sym 99.8 5.9E-19 1.3E-23 163.2 21.5 154 11-170 20-199 (410)
61 PRK12382 putative transporter; 99.8 9.2E-19 2E-23 161.0 22.7 234 32-315 48-289 (392)
62 TIGR00899 2A0120 sugar efflux 99.8 8.1E-19 1.7E-23 160.0 22.1 238 33-313 31-273 (375)
63 TIGR00901 2A0125 AmpG-related 99.8 1.2E-18 2.7E-23 158.0 22.5 249 33-315 21-285 (356)
64 cd06174 MFS The Major Facilita 99.8 9.6E-19 2.1E-23 157.2 21.6 221 32-316 31-253 (352)
65 KOG1330 Sugar transporter/spin 99.8 1.9E-21 4.2E-26 174.1 3.8 153 28-182 61-214 (493)
66 PRK03633 putative MFS family t 99.8 1.1E-18 2.4E-23 160.0 21.6 249 14-315 26-275 (381)
67 TIGR00897 2A0118 polyol permea 99.8 3.4E-18 7.3E-23 157.9 23.7 239 32-308 45-290 (402)
68 PRK11652 emrD multidrug resist 99.8 4.1E-18 8.9E-23 156.8 22.9 161 12-181 26-187 (394)
69 PRK11010 ampG muropeptide tran 99.8 5E-18 1.1E-22 160.6 23.4 228 50-313 60-297 (491)
70 PRK09874 drug efflux system pr 99.8 9.9E-18 2.2E-22 154.7 21.3 141 37-181 56-197 (408)
71 PRK11902 ampG muropeptide tran 99.8 1.9E-17 4.2E-22 152.8 23.1 244 32-313 31-284 (402)
72 PRK10489 enterobactin exporter 99.8 5.5E-18 1.2E-22 157.2 19.4 243 33-314 50-298 (417)
73 PRK08633 2-acyl-glycerophospho 99.8 1.1E-17 2.5E-22 173.4 20.7 252 35-315 47-309 (1146)
74 COG2223 NarK Nitrate/nitrite t 99.8 1.7E-17 3.8E-22 147.6 18.4 243 32-318 46-297 (417)
75 PRK15011 sugar efflux transpor 99.8 1E-16 2.3E-21 147.5 21.3 235 33-312 49-289 (393)
76 PRK11646 multidrug resistance 99.8 1.6E-16 3.4E-21 146.7 22.1 144 32-179 43-187 (400)
77 TIGR00892 2A0113 monocarboxyla 99.8 1.5E-17 3.3E-22 156.0 15.2 136 32-172 51-188 (455)
78 PRK10054 putative transporter; 99.7 8.4E-17 1.8E-21 148.3 17.4 146 32-181 40-186 (395)
79 PF06609 TRI12: Fungal trichot 99.7 5.8E-16 1.2E-20 146.5 22.9 132 34-169 77-208 (599)
80 PRK06814 acylglycerophosphoeth 99.7 2.1E-16 4.6E-21 163.9 21.6 240 35-309 52-295 (1140)
81 TIGR00882 2A0105 oligosacchari 99.7 2.8E-15 6E-20 138.2 22.4 247 32-316 35-295 (396)
82 TIGR00806 rfc RFC reduced fola 99.7 3.3E-16 7.1E-21 143.2 15.8 262 32-302 58-325 (511)
83 TIGR00902 2A0127 phenyl propri 99.7 3E-15 6.5E-20 137.3 21.6 241 32-316 36-281 (382)
84 PRK11128 putative 3-phenylprop 99.7 4.3E-15 9.4E-20 136.3 21.3 242 32-316 36-281 (382)
85 TIGR00792 gph sugar (Glycoside 99.7 6.3E-16 1.4E-20 144.0 15.7 250 32-316 32-298 (437)
86 PRK10207 dipeptide/tripeptide 99.7 6.7E-15 1.5E-19 138.9 22.6 131 32-165 47-181 (489)
87 KOG2615 Permease of the major 99.7 8.1E-16 1.8E-20 134.9 14.2 109 33-142 66-174 (451)
88 PRK09528 lacY galactoside perm 99.6 2.3E-14 4.9E-19 133.1 19.3 140 32-177 43-190 (420)
89 PRK10642 proline/glycine betai 99.6 5.2E-15 1.1E-19 140.2 14.1 166 35-203 286-459 (490)
90 TIGR00889 2A0110 nucleoside tr 99.6 7.6E-14 1.7E-18 129.6 20.8 243 32-317 35-293 (418)
91 TIGR00924 yjdL_sub1_fam amino 99.6 4.2E-13 9E-18 126.6 23.7 134 32-168 45-182 (475)
92 KOG3764 Vesicular amine transp 99.6 5.9E-15 1.3E-19 130.2 9.8 141 33-176 104-245 (464)
93 TIGR00880 2_A_01_02 Multidrug 99.5 1.9E-13 4.1E-18 106.2 10.8 135 42-179 5-140 (141)
94 KOG2504 Monocarboxylate transp 99.5 3E-13 6.6E-18 127.4 13.4 262 34-305 80-363 (509)
95 TIGR02718 sider_RhtX_FptX side 99.5 9.7E-12 2.1E-16 114.3 21.4 240 33-314 34-283 (390)
96 TIGR01301 GPH_sucrose GPH fami 99.5 6E-12 1.3E-16 117.5 19.7 151 32-182 36-223 (477)
97 PTZ00207 hypothetical protein; 99.5 6.6E-13 1.4E-17 126.5 12.6 146 32-184 59-214 (591)
98 COG2807 CynX Cyanate permease 99.5 2E-11 4.3E-16 107.2 20.6 253 13-315 31-284 (395)
99 PRK09584 tppB putative tripept 99.4 2.8E-11 6.1E-16 114.9 23.3 131 33-166 55-189 (500)
100 PRK10429 melibiose:sodium symp 99.4 1.4E-11 3E-16 116.3 16.2 249 32-314 39-305 (473)
101 PF13347 MFS_2: MFS/sugar tran 99.4 7.6E-12 1.7E-16 116.6 13.5 250 32-317 34-302 (428)
102 PF05977 MFS_3: Transmembrane 99.3 1.2E-10 2.6E-15 110.4 19.9 245 34-315 44-294 (524)
103 TIGR01299 synapt_SV2 synaptic 99.3 1.2E-11 2.6E-16 121.2 12.3 136 41-181 601-737 (742)
104 COG0738 FucP Fucose permease [ 99.3 2.5E-10 5.3E-15 101.8 18.8 246 25-308 38-305 (422)
105 PRK09669 putative symporter Ya 99.3 4.8E-11 1E-15 111.8 15.0 148 32-180 42-207 (444)
106 TIGR00889 2A0110 nucleoside tr 99.3 2.2E-11 4.8E-16 113.1 12.1 148 35-182 251-407 (418)
107 TIGR00788 fbt folate/biopterin 99.2 2.7E-10 5.8E-15 107.3 16.3 261 32-317 58-330 (468)
108 PF03825 Nuc_H_symport: Nucleo 99.2 4.4E-09 9.6E-14 96.8 21.5 246 32-316 34-284 (400)
109 PRK15011 sugar efflux transpor 99.2 4.4E-10 9.6E-15 103.5 14.4 143 33-179 250-392 (393)
110 PRK09528 lacY galactoside perm 99.2 1.8E-10 3.9E-15 107.0 11.9 143 35-181 262-407 (420)
111 PRK09848 glucuronide transport 99.2 1.2E-09 2.7E-14 102.3 17.3 101 32-132 41-154 (448)
112 cd06174 MFS The Major Facilita 99.2 3.8E-10 8.2E-15 101.2 13.2 140 33-175 209-349 (352)
113 PRK05122 major facilitator sup 99.1 6.2E-10 1.4E-14 102.6 12.5 137 39-179 253-390 (399)
114 TIGR01272 gluP glucose/galacto 99.1 2E-09 4.4E-14 95.9 15.1 196 83-315 5-218 (310)
115 PF11700 ATG22: Vacuole efflux 99.1 6.7E-08 1.5E-12 90.9 24.8 248 38-314 73-358 (477)
116 PRK15462 dipeptide/tripeptide 99.1 1.7E-09 3.6E-14 101.6 13.9 132 32-166 42-177 (493)
117 PRK11462 putative transporter; 99.1 1.5E-08 3.2E-13 95.4 19.5 149 32-180 42-207 (460)
118 TIGR00890 2A0111 Oxalate/Forma 99.1 1.4E-09 3E-14 98.7 12.1 133 34-169 239-373 (377)
119 PRK09874 drug efflux system pr 99.0 2.7E-09 5.9E-14 98.4 12.3 131 39-172 262-392 (408)
120 TIGR00899 2A0120 sugar efflux 99.0 4.4E-09 9.5E-14 95.8 13.4 142 33-179 233-375 (375)
121 PRK10077 xylE D-xylose transpo 99.0 8.1E-09 1.8E-13 97.5 15.3 143 39-181 310-461 (479)
122 PF05631 DUF791: Protein of un 99.0 4.8E-08 1E-12 86.6 18.3 84 32-116 66-150 (354)
123 PRK11551 putative 3-hydroxyphe 99.0 6.8E-09 1.5E-13 95.9 13.5 138 33-173 253-391 (406)
124 COG2211 MelB Na+/melibiose sym 99.0 2.4E-08 5.2E-13 92.1 16.2 236 49-318 62-315 (467)
125 PF03137 OATP: Organic Anion T 99.0 8.3E-11 1.8E-15 111.9 -0.2 267 29-304 32-371 (539)
126 PRK12382 putative transporter; 99.0 5.1E-09 1.1E-13 96.3 11.4 128 40-171 254-382 (392)
127 PRK09556 uhpT sugar phosphate 98.9 1.5E-08 3.3E-13 95.5 13.0 139 32-170 291-441 (467)
128 TIGR00892 2A0113 monocarboxyla 98.9 5E-09 1.1E-13 98.5 9.2 134 33-169 274-412 (455)
129 KOG4686 Predicted sugar transp 98.9 6.3E-09 1.4E-13 88.6 7.9 99 39-137 83-185 (459)
130 COG2270 Permeases of the major 98.9 3.2E-07 6.9E-12 82.7 19.0 248 35-316 58-329 (438)
131 PRK09952 shikimate transporter 98.9 4.9E-08 1.1E-12 91.3 14.0 136 43-180 294-435 (438)
132 PRK03633 putative MFS family t 98.8 4.1E-08 8.9E-13 90.0 12.5 134 33-172 233-366 (381)
133 KOG2563 Permease of the major 98.8 6E-07 1.3E-11 81.5 18.3 122 37-158 81-213 (480)
134 PRK03893 putative sialic acid 98.8 9.5E-09 2.1E-13 97.5 7.4 130 32-164 308-439 (496)
135 PRK03545 putative arabinose tr 98.8 1.2E-07 2.6E-12 87.2 14.2 134 33-171 239-373 (390)
136 PRK10489 enterobactin exporter 98.8 5E-08 1.1E-12 90.5 11.5 146 32-181 256-403 (417)
137 TIGR00879 SP MFS transporter, 98.8 6.7E-08 1.4E-12 90.5 11.8 144 34-181 318-474 (481)
138 TIGR00898 2A0119 cation transp 98.8 7E-08 1.5E-12 91.8 12.0 131 46-181 366-498 (505)
139 TIGR00883 2A0106 metabolite-pr 98.8 7.8E-08 1.7E-12 87.7 11.8 129 33-165 253-388 (394)
140 KOG2325 Predicted transporter/ 98.7 4E-07 8.8E-12 84.3 15.7 112 34-146 70-187 (488)
141 TIGR00893 2A0114 d-galactonate 98.7 1.2E-07 2.6E-12 86.3 12.2 134 33-170 249-391 (399)
142 COG0477 ProP Permeases of the 98.7 1.2E-07 2.6E-12 82.5 11.6 131 36-167 40-174 (338)
143 KOG3626 Organic anion transpor 98.7 3.6E-08 7.8E-13 94.9 8.4 262 29-305 126-459 (735)
144 TIGR00902 2A0127 phenyl propri 98.7 2.4E-07 5.2E-12 85.0 13.6 112 32-144 237-349 (382)
145 TIGR00887 2A0109 phosphate:H+ 98.7 2.7E-07 5.8E-12 87.9 13.8 138 44-181 344-492 (502)
146 PF01306 LacY_symp: LacY proto 98.7 7.3E-07 1.6E-11 81.5 15.8 247 32-317 40-301 (412)
147 TIGR00891 2A0112 putative sial 98.7 1.4E-07 2.9E-12 86.7 11.2 112 32-143 271-383 (405)
148 COG3104 PTR2 Dipeptide/tripept 98.7 1.2E-06 2.6E-11 80.7 16.7 134 34-170 60-198 (498)
149 TIGR00792 gph sugar (Glycoside 98.7 7.9E-07 1.7E-11 82.8 15.3 104 35-138 257-368 (437)
150 PRK15075 citrate-proton sympor 98.7 6.3E-07 1.4E-11 83.7 14.5 96 33-128 272-371 (434)
151 TIGR00900 2A0121 H+ Antiporter 98.6 2E-07 4.3E-12 84.2 10.3 110 33-142 245-355 (365)
152 PF03209 PUCC: PUCC protein; 98.6 3.4E-06 7.3E-11 76.2 17.7 233 50-317 29-287 (403)
153 TIGR00882 2A0105 oligosacchari 98.6 6E-07 1.3E-11 82.7 13.2 133 36-172 255-389 (396)
154 KOG0569 Permease of the major 98.6 1.4E-06 3E-11 81.3 15.4 144 33-180 303-457 (485)
155 PRK10504 putative transporter; 98.6 7.2E-07 1.6E-11 84.1 13.9 104 34-137 296-402 (471)
156 PRK03699 putative transporter; 98.6 5E-07 1.1E-11 83.2 11.7 136 32-172 238-374 (394)
157 PF11700 ATG22: Vacuole efflux 98.6 1E-06 2.2E-11 83.0 13.8 115 30-144 312-436 (477)
158 PRK08633 2-acyl-glycerophospho 98.6 4.7E-07 1E-11 94.6 12.8 131 33-165 266-397 (1146)
159 TIGR00897 2A0118 polyol permea 98.6 9.6E-07 2.1E-11 81.6 13.4 135 33-173 255-396 (402)
160 PRK09705 cynX putative cyanate 98.6 7.9E-07 1.7E-11 82.0 12.6 146 32-182 237-386 (393)
161 PRK11128 putative 3-phenylprop 98.6 1.3E-06 2.8E-11 80.1 13.6 108 33-141 238-346 (382)
162 PF01770 Folate_carrier: Reduc 98.6 2.2E-06 4.9E-11 78.0 14.7 263 39-305 45-315 (412)
163 PRK12307 putative sialic acid 98.5 9.1E-07 2E-11 82.2 12.1 110 33-142 264-375 (426)
164 TIGR00895 2A0115 benzoate tran 98.5 4.9E-07 1.1E-11 82.6 10.1 111 33-143 283-393 (398)
165 PRK11273 glpT sn-glycerol-3-ph 98.5 1.7E-06 3.6E-11 81.3 13.6 133 34-170 288-427 (452)
166 PLN00028 nitrate transmembrane 98.5 1E-06 2.2E-11 83.3 11.9 141 32-177 285-432 (476)
167 TIGR00901 2A0125 AmpG-related 98.5 5.9E-07 1.3E-11 81.4 9.7 100 33-132 242-353 (356)
168 PRK10406 alpha-ketoglutarate t 98.5 2.3E-06 4.9E-11 79.9 13.6 97 34-130 278-378 (432)
169 PRK11010 ampG muropeptide tran 98.5 2.4E-06 5.3E-11 81.1 13.8 144 32-179 255-404 (491)
170 PRK15402 multidrug efflux syst 98.5 4.3E-06 9.3E-11 77.3 14.6 110 33-143 249-363 (406)
171 PF05977 MFS_3: Transmembrane 98.5 1.5E-06 3.3E-11 82.7 11.4 135 32-169 251-385 (524)
172 PRK11646 multidrug resistance 98.4 2E-06 4.2E-11 79.6 11.4 109 35-143 243-352 (400)
173 TIGR00710 efflux_Bcr_CflA drug 98.4 5.1E-06 1.1E-10 75.8 13.8 126 32-162 239-370 (385)
174 PRK09848 glucuronide transport 98.4 5.3E-06 1.2E-10 77.8 13.9 96 44-139 273-377 (448)
175 PF06813 Nodulin-like: Nodulin 98.4 5.2E-06 1.1E-10 71.1 12.3 145 30-180 32-184 (250)
176 KOG2816 Predicted transporter 98.4 2.8E-06 6.2E-11 79.3 11.4 130 44-182 71-204 (463)
177 PRK11663 regulatory protein Uh 98.4 2.5E-06 5.4E-11 79.7 10.5 137 32-172 276-418 (434)
178 TIGR00711 efflux_EmrB drug res 98.4 3.1E-06 6.6E-11 80.0 10.9 110 32-141 288-401 (485)
179 PRK11195 lysophospholipid tran 98.4 5.8E-06 1.3E-10 76.2 12.3 131 32-165 238-369 (393)
180 PRK10054 putative transporter; 98.3 4.4E-06 9.5E-11 77.1 11.2 112 49-165 258-371 (395)
181 KOG0253 Synaptic vesicle trans 98.3 2.6E-06 5.6E-11 75.6 8.8 130 43-181 389-522 (528)
182 PRK11902 ampG muropeptide tran 98.3 4.6E-06 1E-10 77.0 10.9 135 33-174 243-386 (402)
183 COG2270 Permeases of the major 98.3 6.3E-06 1.4E-10 74.5 11.1 147 31-180 284-431 (438)
184 PRK14995 methyl viologen resis 98.3 5.8E-06 1.3E-10 78.6 11.5 110 33-142 293-405 (495)
185 COG2271 UhpC Sugar phosphate p 98.3 3.6E-06 7.7E-11 76.0 9.3 135 32-169 285-425 (448)
186 TIGR02718 sider_RhtX_FptX side 98.3 1.7E-05 3.7E-10 72.9 13.7 135 33-170 241-383 (390)
187 PRK06814 acylglycerophosphoeth 98.3 6.8E-06 1.5E-10 86.0 11.9 131 32-164 258-408 (1140)
188 TIGR00926 2A1704 Peptide:H+ sy 98.3 0.00015 3.2E-09 70.9 20.3 136 34-169 22-173 (654)
189 TIGR00712 glpT glycerol-3-phos 98.3 6.9E-06 1.5E-10 76.8 10.6 144 33-180 285-436 (438)
190 PRK11102 bicyclomycin/multidru 98.2 3.7E-05 8E-10 70.1 14.8 112 32-144 227-343 (377)
191 PRK10213 nepI ribonucleoside t 98.2 2.7E-05 5.8E-10 71.8 13.9 132 33-169 250-382 (394)
192 TIGR00881 2A0104 phosphoglycer 98.2 4.2E-06 9.1E-11 75.9 8.2 125 32-160 249-379 (379)
193 PF07690 MFS_1: Major Facilita 98.2 6.3E-06 1.4E-10 74.0 9.3 106 35-140 243-351 (352)
194 PRK09669 putative symporter Ya 98.2 5.6E-05 1.2E-09 70.8 15.9 81 38-118 267-349 (444)
195 PRK09584 tppB putative tripept 98.2 1.3E-05 2.9E-10 76.3 11.7 97 47-143 332-437 (500)
196 TIGR00896 CynX cyanate transpo 98.2 1.1E-05 2.4E-10 73.1 10.1 104 32-136 229-334 (355)
197 TIGR01272 gluP glucose/galacto 98.2 3.1E-05 6.6E-10 69.1 12.7 126 32-164 175-301 (310)
198 TIGR00788 fbt folate/biopterin 98.2 1.9E-05 4.2E-10 74.5 11.8 112 31-142 284-405 (468)
199 PF01306 LacY_symp: LacY proto 98.1 1.9E-05 4.2E-10 72.3 10.3 142 35-180 259-403 (412)
200 TIGR02332 HpaX 4-hydroxyphenyl 98.1 1.3E-05 2.8E-10 74.4 9.4 127 34-164 278-407 (412)
201 PRK10091 MFS transport protein 98.1 4.3E-05 9.4E-10 70.1 12.7 132 32-168 232-366 (382)
202 PRK10473 multidrug efflux syst 98.1 7.3E-05 1.6E-09 68.7 13.9 104 33-138 237-341 (392)
203 PRK10429 melibiose:sodium symp 98.1 6.3E-05 1.4E-09 71.1 13.7 83 36-118 267-354 (473)
204 PF05978 UNC-93: Ion channel r 98.1 5.2E-05 1.1E-09 60.1 11.0 102 42-144 44-145 (156)
205 PRK10133 L-fucose transporter; 98.1 5.9E-05 1.3E-09 70.6 13.0 127 32-164 292-419 (438)
206 TIGR00894 2A0114euk Na(+)-depe 98.1 5E-05 1.1E-09 71.5 12.5 144 32-177 294-449 (465)
207 KOG2504 Monocarboxylate transp 98.1 1.7E-05 3.7E-10 75.2 8.7 145 32-178 330-476 (509)
208 PF13347 MFS_2: MFS/sugar tran 98.0 2.3E-05 5E-10 73.1 9.2 102 35-136 260-370 (428)
209 KOG3098 Uncharacterized conser 98.0 0.0027 5.9E-08 59.1 21.6 88 41-129 56-143 (461)
210 PF03825 Nuc_H_symport: Nucleo 98.0 0.00018 3.9E-09 66.4 13.5 126 44-169 252-386 (400)
211 KOG0254 Predicted transporter 97.9 0.00032 7E-09 67.1 14.9 86 45-130 339-437 (513)
212 TIGR00924 yjdL_sub1_fam amino 97.9 0.00014 3.1E-09 68.8 12.2 126 38-166 315-456 (475)
213 COG2814 AraJ Arabinose efflux 97.8 0.00034 7.4E-09 63.7 12.8 137 32-173 244-381 (394)
214 TIGR00903 2A0129 major facilit 97.8 0.00054 1.2E-08 62.7 13.6 133 38-179 229-366 (368)
215 COG2211 MelB Na+/melibiose sym 97.8 0.00082 1.8E-08 62.5 14.7 80 39-118 276-357 (467)
216 PRK11652 emrD multidrug resist 97.8 0.00067 1.4E-08 62.4 14.2 111 33-144 241-354 (394)
217 TIGR00769 AAA ADP/ATP carrier 97.7 0.014 3E-07 55.0 21.8 109 35-143 43-184 (472)
218 TIGR00886 2A0108 nitrite extru 97.7 9.8E-05 2.1E-09 66.9 7.4 98 33-131 259-360 (366)
219 PF00083 Sugar_tr: Sugar (and 97.6 2.8E-06 6E-11 79.6 -4.1 132 47-181 298-440 (451)
220 KOG0252 Inorganic phosphate tr 97.6 4E-05 8.7E-10 70.0 3.4 130 49-181 362-501 (538)
221 PF06779 DUF1228: Protein of u 97.6 0.00017 3.6E-09 50.7 5.6 74 13-92 11-84 (85)
222 PRK11043 putative transporter; 97.6 0.0025 5.4E-08 58.7 15.2 112 33-145 236-353 (401)
223 PRK11462 putative transporter; 97.6 0.0043 9.3E-08 58.5 16.2 81 38-118 266-348 (460)
224 PF12832 MFS_1_like: MFS_1 lik 97.5 0.00086 1.9E-08 46.4 8.4 65 250-315 11-75 (77)
225 PRK10207 dipeptide/tripeptide 97.5 0.0011 2.4E-08 63.0 11.7 107 38-144 312-435 (489)
226 TIGR01301 GPH_sucrose GPH fami 97.5 0.0025 5.3E-08 60.1 13.6 136 45-181 315-475 (477)
227 KOG3762 Predicted transporter 97.5 0.00025 5.5E-09 66.1 6.7 131 34-171 405-540 (618)
228 PRK15034 nitrate/nitrite trans 97.4 0.0019 4.2E-08 60.5 11.8 74 45-118 296-375 (462)
229 COG2223 NarK Nitrate/nitrite t 97.4 0.00063 1.4E-08 61.7 8.2 129 33-169 252-392 (417)
230 COG2807 CynX Cyanate permease 97.4 0.0024 5.2E-08 57.0 11.2 132 32-166 240-373 (395)
231 KOG0255 Synaptic vesicle trans 97.3 0.0034 7.3E-08 60.1 12.2 130 50-182 365-497 (521)
232 KOG4686 Predicted sugar transp 97.3 0.002 4.3E-08 55.7 8.8 132 32-164 297-428 (459)
233 PF03092 BT1: BT1 family; Int 97.2 0.018 4E-07 53.8 15.9 144 32-179 22-176 (433)
234 TIGR00885 fucP L-fucose:H+ sym 97.2 0.0034 7.3E-08 58.3 10.8 106 40-148 274-380 (410)
235 PF03209 PUCC: PUCC protein; 97.1 0.017 3.6E-07 52.7 13.4 140 30-169 239-389 (403)
236 PRK15462 dipeptide/tripeptide 97.1 0.0036 7.7E-08 59.3 9.6 68 249-317 19-88 (493)
237 KOG3764 Vesicular amine transp 97.0 0.0019 4.2E-08 58.3 6.4 131 36-169 307-445 (464)
238 KOG3810 Micronutrient transpor 96.8 0.018 3.8E-07 51.3 10.9 241 52-305 59-301 (433)
239 KOG2532 Permease of the major 96.5 0.03 6.5E-07 52.8 10.8 144 29-174 288-443 (466)
240 PF06609 TRI12: Fungal trichot 96.3 0.021 4.5E-07 55.2 9.2 56 261-318 66-121 (599)
241 PRK15403 multidrug efflux syst 96.3 0.064 1.4E-06 49.8 12.2 103 33-136 252-359 (413)
242 PF00854 PTR2: POT family; In 96.3 0.039 8.5E-07 50.4 10.5 103 66-171 2-116 (372)
243 PF12832 MFS_1_like: MFS_1 lik 96.2 0.012 2.6E-07 40.7 5.0 44 32-75 32-75 (77)
244 KOG2533 Permease of the major 96.1 0.031 6.7E-07 53.0 8.9 126 33-160 307-438 (495)
245 KOG2816 Predicted transporter 96.1 0.11 2.4E-06 48.9 12.3 110 30-140 272-382 (463)
246 COG0738 FucP Fucose permease [ 95.8 0.094 2E-06 47.8 9.9 86 33-119 270-355 (422)
247 PF03219 TLC: TLC ATP/ADP tran 95.7 2 4.4E-05 40.8 22.0 100 47-146 71-203 (491)
248 KOG0637 Sucrose transporter an 95.7 0.017 3.8E-07 53.2 4.9 97 48-144 80-199 (498)
249 PTZ00207 hypothetical protein; 95.5 0.25 5.5E-06 48.0 12.5 135 40-176 396-550 (591)
250 KOG4332 Predicted sugar transp 95.2 0.33 7.2E-06 42.0 10.6 72 49-123 86-158 (454)
251 KOG2563 Permease of the major 94.8 0.18 4E-06 46.6 8.7 117 33-149 299-421 (480)
252 PF03092 BT1: BT1 family; Int 94.6 0.21 4.5E-06 46.8 8.9 105 32-136 252-366 (433)
253 PF06963 FPN1: Ferroportin1 (F 94.5 4.1 8.8E-05 38.1 19.9 44 38-81 41-84 (432)
254 COG3202 ATP/ADP translocase [E 94.5 4.4 9.5E-05 38.2 18.8 112 35-146 61-206 (509)
255 COG3104 PTR2 Dipeptide/tripept 93.8 0.42 9.1E-06 44.8 8.9 107 38-144 327-450 (498)
256 PF02487 CLN3: CLN3 protein; 93.7 0.25 5.4E-06 45.5 7.2 65 84-148 331-395 (402)
257 PF05631 DUF791: Protein of un 93.3 0.64 1.4E-05 41.9 8.9 49 266-315 61-109 (354)
258 KOG3098 Uncharacterized conser 92.8 3.1 6.7E-05 39.1 13.0 94 44-138 288-402 (461)
259 PF13000 Acatn: Acetyl-coenzym 92.7 1.1 2.4E-05 42.2 9.9 33 112-144 142-174 (544)
260 PF02487 CLN3: CLN3 protein; 92.5 5.7 0.00012 36.7 14.2 123 47-176 71-193 (402)
261 TIGR00806 rfc RFC reduced fola 91.7 1.1 2.4E-05 42.3 8.7 78 237-316 26-103 (511)
262 KOG1237 H+/oligopeptide sympor 91.2 1.8 4E-05 41.9 10.0 115 49-166 87-233 (571)
263 KOG2615 Permease of the major 90.7 1.3 2.8E-05 40.4 7.8 114 31-144 293-408 (451)
264 TIGR00805 oat sodium-independe 90.6 0.27 5.8E-06 48.4 3.8 75 242-317 36-110 (633)
265 TIGR00939 2a57 Equilibrative N 90.3 3.3 7.1E-05 38.9 10.6 92 87-183 105-201 (437)
266 PF06963 FPN1: Ferroportin1 (F 89.9 4.1 9E-05 38.1 10.8 124 33-157 291-424 (432)
267 PF06813 Nodulin-like: Nodulin 89.0 1.7 3.7E-05 37.4 7.0 61 255-317 18-78 (250)
268 KOG3762 Predicted transporter 86.3 0.61 1.3E-05 44.3 2.9 61 255-316 27-87 (618)
269 PF06779 DUF1228: Protein of u 85.5 4.8 0.0001 28.3 6.4 59 257-316 10-68 (85)
270 KOG1330 Sugar transporter/spin 85.3 2.1 4.6E-05 40.0 5.8 55 263-318 57-111 (493)
271 PRK03612 spermidine synthase; 85.2 24 0.00052 34.0 13.2 100 38-137 53-162 (521)
272 KOG1479 Nucleoside transporter 81.9 38 0.00082 31.4 12.3 37 86-123 115-151 (406)
273 TIGR00939 2a57 Equilibrative N 80.6 9.6 0.00021 35.8 8.4 62 86-147 370-431 (437)
274 PF05978 UNC-93: Ion channel r 78.7 8.4 0.00018 30.5 6.3 37 280-316 42-78 (156)
275 KOG1479 Nucleoside transporter 78.1 8.5 0.00019 35.5 7.0 109 36-145 283-400 (406)
276 KOG2881 Predicted membrane pro 76.1 23 0.00051 30.4 8.4 31 286-316 251-281 (294)
277 PF07672 MFS_Mycoplasma: Mycop 75.4 30 0.00065 30.0 9.1 104 38-142 144-257 (267)
278 KOG3574 Acetyl-CoA transporter 72.2 84 0.0018 29.2 14.8 91 53-143 81-188 (510)
279 KOG3880 Predicted small molecu 67.9 16 0.00035 32.6 5.9 76 71-146 325-400 (409)
280 KOG2325 Predicted transporter/ 66.9 8 0.00017 36.7 4.2 56 263-318 59-115 (488)
281 PF01733 Nucleoside_tran: Nucl 66.5 2 4.3E-05 38.2 0.1 102 43-146 190-306 (309)
282 COG0477 ProP Permeases of the 66.2 28 0.00061 29.2 7.4 55 259-313 22-77 (338)
283 KOG0637 Sucrose transporter an 63.8 8.6 0.00019 36.0 3.7 75 42-116 339-413 (498)
284 KOG3097 Predicted membrane pro 61.8 31 0.00067 31.1 6.5 68 50-118 73-140 (390)
285 COG1271 CydA Cytochrome bd-typ 60.4 1.5E+02 0.0033 27.9 16.6 34 47-83 108-141 (457)
286 PF01770 Folate_carrier: Reduc 56.2 99 0.0022 28.8 9.2 92 34-125 284-377 (412)
287 PRK14229 camphor resistance pr 55.5 81 0.0018 23.2 7.3 47 73-119 34-80 (108)
288 TIGR00926 2A1704 Peptide:H+ sy 51.5 40 0.00086 33.5 6.2 53 264-317 13-66 (654)
289 PRK14230 camphor resistance pr 47.7 1.1E+02 0.0025 22.9 6.8 80 44-123 8-88 (119)
290 TIGR00880 2_A_01_02 Multidrug 47.4 56 0.0012 23.8 5.4 43 35-77 87-129 (141)
291 COG5336 Uncharacterized protei 47.0 36 0.00078 25.0 3.8 20 294-313 61-81 (116)
292 PF04550 Phage_holin_2: Phage 45.4 1.1E+02 0.0023 21.6 6.1 51 86-143 29-79 (89)
293 PF01733 Nucleoside_tran: Nucl 45.3 7 0.00015 34.7 0.0 83 96-183 5-89 (309)
294 COG5336 Uncharacterized protei 41.0 71 0.0015 23.5 4.5 30 41-70 48-78 (116)
295 COG1288 Predicted membrane pro 40.5 2.4E+02 0.0053 26.5 8.9 19 151-169 213-231 (481)
296 PF10183 ESSS: ESSS subunit of 40.4 58 0.0013 23.8 4.2 31 152-182 55-86 (105)
297 TIGR02230 ATPase_gene1 F0F1-AT 40.1 1E+02 0.0022 22.4 5.2 32 42-73 50-81 (100)
298 PF07672 MFS_Mycoplasma: Mycop 39.8 70 0.0015 27.8 5.1 50 120-170 2-54 (267)
299 KOG1237 H+/oligopeptide sympor 39.5 50 0.0011 32.2 4.8 62 87-148 457-518 (571)
300 PF04226 Transgly_assoc: Trans 38.8 43 0.00094 20.6 2.8 17 48-64 4-20 (48)
301 COG4769 Predicted membrane pro 38.1 39 0.00085 26.9 3.1 46 50-101 88-133 (181)
302 PF10785 NADH-u_ox-rdase: NADH 35.6 1.1E+02 0.0024 21.5 4.8 39 49-87 32-77 (86)
303 PRK14200 camphor resistance pr 32.0 2.3E+02 0.0049 21.5 7.2 80 44-123 10-97 (127)
304 KOG3810 Micronutrient transpor 31.3 1.8E+02 0.004 26.7 6.5 90 37-126 273-364 (433)
305 KOG4830 Predicted sugar transp 31.0 78 0.0017 27.7 4.0 50 263-313 41-100 (412)
306 PRK10692 hypothetical protein; 30.2 1.1E+02 0.0024 21.4 3.9 18 64-81 3-20 (92)
307 PRK14211 camphor resistance pr 28.7 2.5E+02 0.0053 20.9 7.3 80 44-123 6-86 (114)
308 PRK14220 camphor resistance pr 28.7 2.5E+02 0.0055 21.0 7.4 78 44-121 6-88 (120)
309 KOG4332 Predicted sugar transp 27.0 2.1E+02 0.0046 25.4 6.0 92 37-128 284-384 (454)
310 TIGR02230 ATPase_gene1 F0F1-AT 26.9 2.5E+02 0.0054 20.4 5.5 31 136-166 55-86 (100)
311 COG1811 Uncharacterized membra 26.3 2.9E+02 0.0063 23.2 6.4 53 43-95 11-63 (228)
312 PF10762 DUF2583: Protein of u 25.0 1.4E+02 0.0029 20.9 3.6 18 64-81 3-20 (89)
313 PF00854 PTR2: POT family; In 24.2 1.3E+02 0.0027 27.3 4.6 72 4-83 49-120 (372)
314 PF12670 DUF3792: Protein of u 24.1 3E+02 0.0065 20.3 6.6 61 44-104 47-110 (116)
315 PRK14196 chromosome condensati 23.6 3.3E+02 0.0071 20.6 7.4 80 44-123 8-94 (127)
316 PF06341 DUF1056: Protein of u 23.2 1.5E+02 0.0033 19.4 3.4 36 87-123 27-62 (63)
317 PF06645 SPC12: Microsomal sig 22.4 2.6E+02 0.0057 19.0 5.3 17 46-62 18-34 (76)
318 PF04474 DUF554: Protein of un 22.3 3.1E+02 0.0068 23.2 6.1 39 43-81 10-48 (226)
319 COG1268 BioY Uncharacterized c 22.0 3.2E+02 0.007 22.3 5.9 23 42-64 89-111 (184)
320 PRK14201 camphor resistance pr 20.8 3.7E+02 0.008 20.1 7.6 79 44-123 6-90 (121)
321 PF09527 ATPase_gene1: Putativ 20.8 2.2E+02 0.0049 17.6 5.5 34 45-78 10-44 (55)
322 PRK14232 camphor resistance pr 20.8 3.7E+02 0.008 20.1 7.2 80 44-123 6-88 (120)
323 PF02632 BioY: BioY family; I 20.5 3.5E+02 0.0076 21.1 5.7 25 42-66 60-84 (148)
324 PRK14205 camphor resistance pr 20.2 3.8E+02 0.0082 20.0 7.3 80 44-124 7-90 (118)
325 PRK14233 camphor resistance pr 20.1 4.1E+02 0.0088 20.3 7.4 79 44-123 9-98 (133)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.4e-38 Score=287.67 Aligned_cols=311 Identities=28% Similarity=0.472 Sum_probs=254.8
Q ss_pred CCCchhHHHhhhhhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHH
Q 047275 2 VTSMEPFLKKFFPEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSAL 81 (319)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~ 81 (319)
+|+..+..+++.++.+..... ...++ +.-...-+.+++++++|+++|+++.++++||+|||..++++.++..+++++
T Consensus 30 iNap~~~i~~f~n~t~~~r~g-~~~s~--~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~ 106 (485)
T KOG0569|consen 30 VNAPQELIKSFINETLIERYG-LPLSD--STLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALL 106 (485)
T ss_pred cCchHHHHHHHHHHHHHHhcC-CCCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 466778888888887755432 11111 001233456788899999999999999999999999999999999988877
Q ss_pred hhh---chhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccC-CCcchH
Q 047275 82 GGA---AFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIK-GGWGWR 157 (319)
Q Consensus 82 ~~~---a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~~~gWr 157 (319)
..+ ++++++++++|++.|+..|......+.|+.|.+|++.||..+...+++..+|.+++...+. ..+. ..-.|+
T Consensus 107 ~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l--~~ilGt~~~W~ 184 (485)
T KOG0569|consen 107 MGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGL--PSLLGTEDLWP 184 (485)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHcc--HHhcCCCcchH
Confidence 655 4889999999999999999999999999999999999999999999999999888865543 1222 234699
Q ss_pred HHHHhhHHHHHHHHHhcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhc---cccccchhhhhcc
Q 047275 158 ISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVS---RTVKHPFQTIIQR 234 (319)
Q Consensus 158 ~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~ 234 (319)
+.+.+..+|+++.++...++||||+|+..+++|++||++.+++.++.++.+++.++..++.+++ ++.+.+++++++.
T Consensus 185 ~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~ 264 (485)
T KOG0569|consen 185 YLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKN 264 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcC
Confidence 9999999999998899999999999999977779999999999999877666554443332222 2245578888875
Q ss_pred -cchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 235 -KYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
..|+.....+.+.+.+++++++.+.+|...++++.|++.+... ..+...+.+.+++++++.+++||.|||++++.+..
T Consensus 265 ~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~-~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~ 343 (485)
T KOG0569|consen 265 PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQ-YANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLS 343 (485)
T ss_pred cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 4566677788899999999999999999999999999887666 67888899999999999999999999999999998
Q ss_pred Hhhhc
Q 047275 314 LMFVS 318 (319)
Q Consensus 314 ~~~~~ 318 (319)
+|.++
T Consensus 344 ~~~~~ 348 (485)
T KOG0569|consen 344 LMAVA 348 (485)
T ss_pred HHHHH
Confidence 88764
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3.3e-35 Score=279.06 Aligned_cols=278 Identities=36% Similarity=0.617 Sum_probs=240.8
Q ss_pred hhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHh
Q 047275 36 LLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSE 115 (319)
Q Consensus 36 ~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e 115 (319)
..++++++..+|.++|+++.|+++|++|||++++.+.+++.++++++++++|+++++++|+++|+|.|+.....+.|++|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHHHH
Q 047275 116 MAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEKAK 195 (319)
Q Consensus 116 ~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~a~ 195 (319)
.+|++.||...+..++...+|.+.+.+.++...+. + ++||.++.+..+|+++..+..+++||||+|+..+++ .++++
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~-~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~-~~~a~ 246 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-Y-AGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGR-LEEAK 246 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-C-ccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCC-hHHHH
Confidence 99999999999999999999999888887766544 2 789999999999998877778889999999998766 78899
Q ss_pred HHHHHHcC--ChhHHHHHHHHHHHHhh---ccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcC
Q 047275 196 KMLQRVRG--TADVQAELDDLIRASIV---SRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIK 270 (319)
Q Consensus 196 ~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (319)
+.++++.+ +.+.+.+.++....... ..+.+..+.+++++..+++.........+++.++++.+.+|.+.+++..+
T Consensus 247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g 326 (513)
T KOG0254|consen 247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAG 326 (513)
T ss_pred HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcC
Confidence 99999988 34444444444311111 11222347788887788888889999999999999999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhhc
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFVS 318 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~~ 318 (319)
...+. ...+.+.+++.++++.++.++.||+|||++++.+...|.++
T Consensus 327 ~~~~~--~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~ 372 (513)
T KOG0254|consen 327 LKSDT--FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSIC 372 (513)
T ss_pred CCCch--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHH
Confidence 88664 45677888999999999999999999999999999888765
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.6e-32 Score=257.87 Aligned_cols=281 Identities=19% Similarity=0.249 Sum_probs=199.8
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchh------hhHHHHHHHHHhhhhhhcc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFN------VYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~------~~~li~~R~l~Gig~g~~~ 106 (319)
++.+.+++.+...+|..+|+++.|+++||+|||+++.++.+++.+++++++++++ ++.++++|+++|++.|+..
T Consensus 54 ~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 54 PSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 4566778999999999999999999999999999999999999999999888765 7899999999999999999
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccc-c-------------------CCCcchHHHHHhhHHH
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQK-I-------------------KGGWGWRISLSMAAAP 166 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-~-------------------~~~~gWr~~f~~~~~~ 166 (319)
+..+.+++|++|+++||+..+..+.+..+|.+.+..+...+.. . ...++||++|.+..+|
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip 213 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVP 213 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHH
Confidence 9999999999999999999988888888887666555432210 0 1136899999999999
Q ss_pred HHHHHHhcccccCChhhHHhccCChHHHHHHHHHHcCChhH--HHHHHHHHHHHhhccccccchhhhhcccchh---HHH
Q 047275 167 ASILTLGALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADV--QAELDDLIRASIVSRTVKHPFQTIIQRKYRP---QLV 241 (319)
Q Consensus 167 ~~~~~~~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~ 241 (319)
+++..+.++++||||+|+..++++++++++.+++..+.+.. .++.++.++ +.++.+.++++++++.+.+ +..
T Consensus 214 ~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 290 (502)
T TIGR00887 214 ALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKAST---AVEVPKASWSDFFTHFFKWRHGKHL 290 (502)
T ss_pred HHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhc---cccchhhhHHHHHHHHhhhHHHHHH
Confidence 88877778899999999998877655666666665432111 111111110 1111123577777543222 222
Q ss_pred HHHHHHHHHhhhhhhHhHhhhHHHHHhcCCCchhh-----------HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Q 047275 242 MAILIPFFQQLTGINVISFYAPVLFRTIKLSESTS-----------LLMSAVVTGGVSTIATITSMILTDKLGRKVLFLV 310 (319)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 310 (319)
.......+.+...++....|.|.++++.+.+.... ......+..+..+++.++.++++||+|||+++++
T Consensus 291 ~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~ 370 (502)
T TIGR00887 291 LGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLM 370 (502)
T ss_pred HHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHH
Confidence 22222233333345566678899888877654311 1112233344567788999999999999998877
Q ss_pred hhHHhh
Q 047275 311 GGILMF 316 (319)
Q Consensus 311 g~~~~~ 316 (319)
+..++.
T Consensus 371 ~~~~~~ 376 (502)
T TIGR00887 371 GFFILT 376 (502)
T ss_pred HHHHHH
Confidence 665443
No 4
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.98 E-value=1.1e-36 Score=285.04 Aligned_cols=280 Identities=33% Similarity=0.637 Sum_probs=229.6
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhch---hhhHHHHHHHHHhhhhhhccchhhH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAF---NVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~---~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.+.++..++.++|..+|++++|+++||+|||++++.+.++..+++++.++++ |++.++++|+++|++.|+..+...+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4567889999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCCh
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~ 191 (319)
|+.|..|+++||+.....+.++.+|.+.+.++.+......+.+.||+.+.+..+++++..+...++||||+|+..+++ .
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~-~ 204 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGR-D 204 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccc-c
Confidence 999999999999999999999999988887777655444445789999999999987777778899999999988877 5
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccc-hhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcC
Q 047275 192 EKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKY-RPQLVMAILIPFFQQLTGINVISFYAPVLFRTIK 270 (319)
Q Consensus 192 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (319)
+||++.+++.++.+..+++.++..++.+..++.+..++++++.+. ++++...+...++++.++++...+|.|.++++.+
T Consensus 205 ~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~ 284 (451)
T PF00083_consen 205 EEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAG 284 (451)
T ss_pred cccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccc
Confidence 589998888766544444443333322222222356777877643 5667777777777778888888899999988877
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhhc
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFVS 318 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~~ 318 (319)
.+.+ ...+.+.++..+++++.+.+++||+|||++++.+...+.++
T Consensus 285 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 285 ISNS---FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccc---ccccccccccccccccccccccccccccccccccccccccc
Confidence 7665 24455666778888999999999999999988887766554
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=1.5e-29 Score=238.57 Aligned_cols=280 Identities=24% Similarity=0.431 Sum_probs=203.5
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc------------hhhhHHHHHHHHHh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA------------FNVYMLILGRVLLG 99 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a------------~~~~~li~~R~l~G 99 (319)
.++.+.++..+++++|.+++++++|+++||+|||++++.+.+++.++.++++++ ++++.++++|+++|
T Consensus 52 ~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 131 (479)
T PRK10077 52 AANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGG 131 (479)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHh
Confidence 346778899999999999999999999999999999999999999998877753 33567899999999
Q ss_pred hhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcc-----ccCCCcchHHHHHhhHHHHHHHHHhc
Q 047275 100 VGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQ-----KIKGGWGWRISLSMAAAPASILTLGA 174 (319)
Q Consensus 100 ig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~-----~~~~~~gWr~~f~~~~~~~~~~~~~~ 174 (319)
++.|+..+....+++|++|+++||++.+..+.+..+|.+.+.+.+.... ...+.++||+.|.+.+++.++..+..
T Consensus 132 ~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~ 211 (479)
T PRK10077 132 IGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLL 211 (479)
T ss_pred hhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988888888776665544321 12235799999998888777766667
Q ss_pred ccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhh
Q 047275 175 LILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTG 254 (319)
Q Consensus 175 ~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (319)
+++||+|+++..+++ .+++++..++..+..+.+...++.......+.+ + .+..+. ..............+++..+
T Consensus 212 ~~l~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 286 (479)
T PRK10077 212 YFVPETPRYLMSRGK-QEQAEGILRKIMGNTLATQALQEIKHSLDHGRK--T-GGKLLM-FGVGVIVIGVMLSVFQQFVG 286 (479)
T ss_pred HcCCCCcHHHHHcCC-HHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhh--h-hhhhcc-hhHHHHHHHHHHHHHHHHhC
Confidence 789999999876655 566666667665544333222222111110000 0 011111 11112222333445556666
Q ss_pred hhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhh
Q 047275 255 INVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFV 317 (319)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~ 317 (319)
++...+|.|.+.++.+.+..... ......++..+++.++.++++||+|||++++.+..++.+
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v 348 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDIAL-LQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAI 348 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCchHH-HHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHH
Confidence 77778899999888887654433 445567778889999999999999999998877766554
No 6
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=6.1e-30 Score=248.61 Aligned_cols=234 Identities=16% Similarity=0.185 Sum_probs=178.9
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+....+++.++.++|.++|++++|+++||+|||++++++++++.+++++++++++++.++++|+++|++.|+..+....+
T Consensus 200 s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~ 279 (742)
T TIGR01299 200 PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSY 279 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccc----------cCCCcchHHHHHhhHHHHHHHHHhcccccCChh
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQK----------IKGGWGWRISLSMAAAPASILTLGALILPDTPN 182 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~----------~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~ 182 (319)
++|++|+++||...+....++.+|.+++..+++.+.. .....+||+++.+.++++++.++..+++||||+
T Consensus 280 isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPr 359 (742)
T TIGR01299 280 FAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPR 359 (742)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 9999999999998888888888887666554432211 011257999999998888877777888999999
Q ss_pred hHHhccCChHHHHHHHHHHcCChhH-----HHH--HHHHHHHHh-------hcccc-----------------ccchhhh
Q 047275 183 SIIQRSNGHEKAKKMLQRVRGTADV-----QAE--LDDLIRASI-------VSRTV-----------------KHPFQTI 231 (319)
Q Consensus 183 ~~~~~~~~~~~a~~~~~~~~~~~~~-----~~~--~~~~~~~~~-------~~~~~-----------------~~~~~~l 231 (319)
|+..+++ .+++.+.++++.+.+.. ... .+..+.... .+.+. ...++++
T Consensus 360 wL~~~gr-~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (742)
T TIGR01299 360 FFLENGK-HDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRC 438 (742)
T ss_pred HHHHCCC-HHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHH
Confidence 9988876 78888888888654311 111 001100000 00000 0135668
Q ss_pred hcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHh
Q 047275 232 IQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRT 268 (319)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (319)
|...+++++++.+.+. +....+++.+..|.|.++++
T Consensus 439 f~~~~~~~tl~l~~~w-f~~~~~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 439 FNPEVREITIKLMGVW-FTLSFGYYGLSVWFPDMIKH 474 (742)
T ss_pred cCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 8888888877766654 44556788889999987543
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.96 E-value=3.3e-28 Score=230.10 Aligned_cols=248 Identities=17% Similarity=0.238 Sum_probs=175.1
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhH--------HHHHHHHHhhhhhhccchhhHH
Q 047275 41 TSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYM--------LILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 41 ~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~--------li~~R~l~Gig~g~~~~~~~~~ 112 (319)
.+..+++..+|++++|+++||+|||+++..+++++.++++++++++|++. ++++|+++|++.|+..+....+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 46678899999999999999999999999999999999999999999875 8999999999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcc-----ccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhc
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQ-----KIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQR 187 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~-----~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~ 187 (319)
++|++|+++||++.+....+..+|.+.+..+...+. .....+|||++|++.++++++..+.+..+||+|++...+
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~ 222 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHV 222 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHH
Confidence 999999999999888888777777665543332211 112358999999998776665555667899999875322
Q ss_pred cCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH
Q 047275 188 SNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR 267 (319)
Q Consensus 188 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (319)
++ .++. .. + . ..++.+.++++++++ +++.+....... +.....++.+..|.|.+++
T Consensus 223 ~~-~~~~-------~~-~-------~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~l~ 278 (490)
T PRK10642 223 DK-LEQG-------DR-E-------G------LQDGPKVSFKEIATK-HWRSLLTCIGLV-IATNVTYYMLLTYMPSYLS 278 (490)
T ss_pred Hh-hhhh-------cc-c-------c------ccccccCCHHHHHHH-hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 11 0000 00 0 0 000123356666654 333333333222 2233445666678888875
Q ss_pred h-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 268 T-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 268 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
+ .+.+..... .......+..+++.++.|+++||+|||+.++.+.+
T Consensus 279 ~~~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 324 (490)
T PRK10642 279 HNLHYSEDHGV-LIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSV 324 (490)
T ss_pred HhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4 566544333 34445556677888999999999999998766654
No 8
>TIGR00898 2A0119 cation transport protein.
Probab=99.96 E-value=3.5e-28 Score=230.75 Aligned_cols=267 Identities=20% Similarity=0.296 Sum_probs=192.2
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
+...+...+.+++|.++|+++.|+++||+|||++++++.++..++.+++++++|++.++++|+++|++.|+..+....++
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 205 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLN 205 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHh
Confidence 56678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHH
Q 047275 114 SEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEK 193 (319)
Q Consensus 114 ~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~ 193 (319)
.|++|+++|+...+....+..+|.+.+.++++... +||+.+.+.+++.++..+..+++||+|+|+..+++ .++
T Consensus 206 ~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~-~~~ 278 (505)
T TIGR00898 206 TEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP------DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGR-IEE 278 (505)
T ss_pred heecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCC-HHH
Confidence 99999999999888888888889887777766542 39999998888877766666789999999988766 566
Q ss_pred HHHHHHHHcCChhH--HHHHHHHH-HHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcC
Q 047275 194 AKKMLQRVRGTADV--QAELDDLI-RASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIK 270 (319)
Q Consensus 194 a~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (319)
+++.+++..+.+.. ..+..+.. +.+..+++.+.+++++++.+..+.........++.....++.. +......+
T Consensus 279 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 354 (505)
T TIGR00898 279 ALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGL----VLDLGNLG 354 (505)
T ss_pred HHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----hccccccC
Confidence 66666655432111 11110100 0111111123467777765544433333322222222112222 22222222
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
.+ ......+.++..+++.++.+++.||+|||+.++++..++
T Consensus 355 ~~----~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~ 395 (505)
T TIGR00898 355 GN----IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLA 395 (505)
T ss_pred CC----hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 22 234455677888999999999999999999876665544
No 9
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.96 E-value=1e-26 Score=216.68 Aligned_cols=235 Identities=20% Similarity=0.204 Sum_probs=163.3
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhh--------HHHHHHHHHhhhhhhccchhhHH
Q 047275 41 TSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVY--------MLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 41 ~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~--------~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
.+..+++..+|++++|+++||+|||+++..+.+.+.++++++++++++. .+++.|+++|++.|+..+....+
T Consensus 69 ~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~ 148 (432)
T PRK10406 69 FAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATY 148 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHH
Confidence 3455667779999999999999999999999999999999999998875 59999999999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcccc-----CCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhc
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKI-----KGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQR 187 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~-----~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~ 187 (319)
++|++|+++||++.+..+.+...|.+.+.++...+... .+.+|||++|.+.++++++..+.+..+||+|++..
T Consensus 149 i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~-- 226 (432)
T PRK10406 149 MSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQET-- 226 (432)
T ss_pred HHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHH--
Confidence 99999999999988887777777766555443322211 12479999999988887766556666788764310
Q ss_pred cCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH
Q 047275 188 SNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR 267 (319)
Q Consensus 188 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (319)
+.. + .+.+++++++ +++ .+.......+.....++.+..|.|.+++
T Consensus 227 -----~~~---~------------------------~~~~~~~l~~--~~~-~~~~~~~~~~~~~~~~~~~~~~lp~~l~ 271 (432)
T PRK10406 227 -----RAL---K------------------------EAGSLKGLWR--NRR-AFIMVLGFTAAGSLCFYTFTTYMQKYLV 271 (432)
T ss_pred -----hhh---c------------------------ccccHHHHHh--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 0113344442 122 2222222222223345556667777765
Q ss_pred -hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 268 -TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
+.+.+..+.. ....+......++..+.|+++||+|||+..+++..
T Consensus 272 ~~~g~s~~~~~-~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~ 317 (432)
T PRK10406 272 NTAGMHANVAS-GIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGS 317 (432)
T ss_pred HhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 4566544333 33334445556777888999999999987665543
No 10
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=1.4e-26 Score=220.79 Aligned_cols=267 Identities=19% Similarity=0.205 Sum_probs=192.5
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+........+.+++|.++|++++|+++||+|||+++++++++..++++++++++|++.+++.|+++|++.++.......+
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhh
Confidence 44556667788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChH
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHE 192 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~ 192 (319)
++|+.++++|+...+.....+..|.+.....+++.+ +||+.+++..++..+.++.+++.||||+|+..+++ .+
T Consensus 196 ~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~------~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~-~~ 268 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITR------DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGR-ID 268 (521)
T ss_pred heeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh------hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCc-hH
Confidence 999999999999887766666777777777777654 69999999898887766666667799999999887 57
Q ss_pred HHHHHHHHHcCC----hhHHHHHHHH---HHHHhhccccccchhhhhcccc-hhHHHHHHHHHHHHhhhhhhHhHhhhHH
Q 047275 193 KAKKMLQRVRGT----ADVQAELDDL---IRASIVSRTVKHPFQTIIQRKY-RPQLVMAILIPFFQQLTGINVISFYAPV 264 (319)
Q Consensus 193 ~a~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (319)
++.+.+++.... .+.+...+.. ........+.+..+.++++..+ ++++....... +.....++.. +.
T Consensus 269 ~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~~~~~y~gl----~~ 343 (521)
T KOG0255|consen 269 EAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIW-FVFSLVYYGL----SL 343 (521)
T ss_pred HHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHH-HHHhHHHHhh----hh
Confidence 788888877432 1121111111 1111111122345777777653 33333333222 1111111221 11
Q ss_pred HHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 265 LFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
..+..+ .+.+....+.+....++....+...|+.|||...+.+..+.
T Consensus 344 ~~~~lg----~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~ 390 (521)
T KOG0255|consen 344 NVSGLG----GNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLA 390 (521)
T ss_pred hhhhcC----chHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 122222 23445556666789999999999999999998876665544
No 11
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.95 E-value=6.3e-26 Score=212.48 Aligned_cols=282 Identities=35% Similarity=0.631 Sum_probs=199.7
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc---hhhhHHHHHHHHHhhhhhhccchh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA---FNVYMLILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a---~~~~~li~~R~l~Gig~g~~~~~~ 109 (319)
++.+.+++.+.++++..+++++.|+++||+|||++++.+.+++.++.+++.++ .+++.++++|+++|++.|...+..
T Consensus 69 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 148 (481)
T TIGR00879 69 SSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALV 148 (481)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHH
Confidence 46778889999999999999999999999999999999999999999888554 445689999999999999999999
Q ss_pred hHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccC
Q 047275 110 PLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSN 189 (319)
Q Consensus 110 ~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~ 189 (319)
..++.|++|+++|++..+....+..+|.+++.++........+..+||+.|.+.++..++..+..+++||+|++...+++
T Consensus 149 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 228 (481)
T TIGR00879 149 PMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGR 228 (481)
T ss_pred HHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCC
Confidence 99999999999999999998888889888777765111112234689999998777766666667788999988765544
Q ss_pred ChHHHHHHHHHHcCChhHHHHH----HHHHH-HHhhccccccchhhhhccc--chhHHHHHHHHHHHHhhhhhhHhHhhh
Q 047275 190 GHEKAKKMLQRVRGTADVQAEL----DDLIR-ASIVSRTVKHPFQTIIQRK--YRPQLVMAILIPFFQQLTGINVISFYA 262 (319)
Q Consensus 190 ~~~~a~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (319)
.+++++..++..+..+.+.+. +.... .....+..+....++++.. ..++........++.+....+...++.
T Consensus 229 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (481)
T TIGR00879 229 -VEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYS 307 (481)
T ss_pred -hHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHH
Confidence 344444444443222111111 00000 0001111122233444322 234444455555555555566778889
Q ss_pred HHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 263 PVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
|+++++.+.+... ......+..+..+++.++.+++.||+|||++.+.+.+++.
T Consensus 308 ~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 360 (481)
T TIGR00879 308 PTIFENAGVSTDH-AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMA 360 (481)
T ss_pred HHHHHHcCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999888877643 3355666677788999999999999999998776655443
No 12
>PRK09952 shikimate transporter; Provisional
Probab=99.95 E-value=3.7e-26 Score=213.15 Aligned_cols=239 Identities=19% Similarity=0.263 Sum_probs=164.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhh--------HHHHHHHHHhhhhhhccchhhHHHH
Q 047275 43 SPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVY--------MLILGRVLLGVGIGFSNQSVPLYLS 114 (319)
Q Consensus 43 ~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~--------~li~~R~l~Gig~g~~~~~~~~~i~ 114 (319)
..+++..+|+++.|+++||+|||+++..+.+.+.++++++++++++. .++++|+++|++.|+.++....+++
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 45667789999999999999999999999999999999999999987 5899999999999999999999999
Q ss_pred hcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcccc-----CCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccC
Q 047275 115 EMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKI-----KGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSN 189 (319)
Q Consensus 115 e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~-----~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~ 189 (319)
|++|+++||++.+..+.+..+|.+++..+...+... ...+|||++|.+.+++.++....+...||+|++...+++
T Consensus 152 e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~ 231 (438)
T PRK09952 152 ESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHE 231 (438)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhh
Confidence 999999999998888888888876664432222111 124899999999888766655556678898876432211
Q ss_pred ChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH-h
Q 047275 190 GHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR-T 268 (319)
Q Consensus 190 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 268 (319)
. ++. + .+.+..+.+.+ +++.... .....+......+....|.|.+++ .
T Consensus 232 ~-~~~----------~------------------~~~~~~~~l~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~~~~ 280 (438)
T PRK09952 232 Q-AAA----------K------------------KRIPVIEALLR-HPGAFLK-IIALRLCELLTMYIVTAFALNYSTQN 280 (438)
T ss_pred c-ccc----------c------------------ccCCHHHHHHH-chHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 000 0 00011111111 1222222 222222233334555566776664 4
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 269 IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
.+.+... ......+.+...+++.++.|+++||+|||+..+.+.+
T Consensus 281 ~g~s~~~-~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~ 324 (438)
T PRK09952 281 LGLPREL-FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGAL 324 (438)
T ss_pred cCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 5555432 2233445566778888999999999999988766543
No 13
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=5.8e-26 Score=196.89 Aligned_cols=275 Identities=19% Similarity=0.203 Sum_probs=205.6
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
......++...+.|+++|+..+|..+|++|||+.+..+.+...+...+.+.++|+..+++.|.+.|+|.|+ .|...++=
T Consensus 112 ~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~y 190 (528)
T KOG0253|consen 112 EGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIY 190 (528)
T ss_pred hhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHH
Confidence 34566889999999999999999999999999999999999999999999999999999999999999999 77777788
Q ss_pred HhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHH
Q 047275 114 SEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEK 193 (319)
Q Consensus 114 ~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~ 193 (319)
.|..|..+|+..+... ..+.+|.+....+.|.... ..||||.....+.|..+++...+|+|||||+...+++ ++|
T Consensus 191 le~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~---~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~-~~k 265 (528)
T KOG0253|consen 191 LEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS---NFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGD-DYK 265 (528)
T ss_pred HHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCC-hHH
Confidence 9999999999876666 8899999999888886532 3689998888888888888888999999999998887 677
Q ss_pred HHHHHHHHcCChhH----------------HHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhH
Q 047275 194 AKKMLQRVRGTADV----------------QAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINV 257 (319)
Q Consensus 194 a~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (319)
|.+.++++...+.. +++.+..+..+...++......+++..+.++.++....+.+...+ .++.
T Consensus 266 AletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnaf-syyg 344 (528)
T KOG0253|consen 266 ALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAF-SYYG 344 (528)
T ss_pred HHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHH-HHHH
Confidence 88888877432211 001111111122223445567788888877777765555443333 3344
Q ss_pred hHhhhHHHHHhcC-------------------CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 258 ISFYAPVLFRTIK-------------------LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 258 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
.......+++.-. -.+....+...++..+.+++|.++.++++||+|||+.+....+++
T Consensus 345 ~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f 421 (528)
T KOG0253|consen 345 SVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILF 421 (528)
T ss_pred HHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHH
Confidence 3333334433211 111223345677888899999999999999999999876555444
No 14
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.94 E-value=2.5e-25 Score=206.04 Aligned_cols=267 Identities=15% Similarity=0.175 Sum_probs=181.1
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+++.+.++++..+++++.|+++||+|||+++..+.+++.++++++++++|++.+++.|+++|++.|+..+....
T Consensus 40 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 119 (412)
T TIGR02332 40 LSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILL 119 (412)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccc---cCCCcchHHHHHhhHHHHHHH-HHhcccccCChhhHHhc
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQK---IKGGWGWRISLSMAAAPASIL-TLGALILPDTPNSIIQR 187 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~---~~~~~gWr~~f~~~~~~~~~~-~~~~~~l~es~~~~~~~ 187 (319)
+++|++|+++|++..+..+.+..+|..++..++..+.. ..+.+|||+.|.+.+++.++. .+.++++||+|+.. +
T Consensus 120 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~ 197 (412)
T TIGR02332 120 YLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA--K 197 (412)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC--C
Confidence 99999999999999999988888887766555432211 123479999999887776553 34566789988531 0
Q ss_pred cCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH
Q 047275 188 SNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR 267 (319)
Q Consensus 188 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (319)
...+++.+...++........++.++.. +....+.+..+++++ .+.. +.....+++.....+.+..|.|.+++
T Consensus 198 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~p~~l~ 270 (412)
T TIGR02332 198 WLDEEDKKALKEMIDNDQLTLEQPEGAF--AHAAMPQRSMLREIF----TPAI-MLYTLAYFCLTNTLSAINIWTPQILQ 270 (412)
T ss_pred CCCHHHHHHHHHHHHhcccccccccccc--ccccccHHHHHHHhc----ChHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001111111111110000000000000 000000011122222 2232 33444445555566777789999988
Q ss_pred hcCC-CchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Q 047275 268 TIKL-SESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVL 307 (319)
Q Consensus 268 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~ 307 (319)
+.+. .+.........+..+..+++.+..++++||++||+.
T Consensus 271 ~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~ 311 (412)
T TIGR02332 271 SFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH 311 (412)
T ss_pred hcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH
Confidence 7432 222333345667777888999999999999998774
No 15
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=4.2e-27 Score=209.54 Aligned_cols=307 Identities=20% Similarity=0.262 Sum_probs=201.1
Q ss_pred CchhHHHhhhhhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh
Q 047275 4 SMEPFLKKFFPEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG 83 (319)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~ 83 (319)
++|.|....+.++.-...-+-. .+..+.++...+.+..+..+|..+|++++|+++|++|||++|...++..++++++++
T Consensus 54 sYDlF~I~lVt~il~~lY~~~~-~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~ 132 (538)
T KOG0252|consen 54 SYDLFSISLVTKILGYLYYHGD-ESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSG 132 (538)
T ss_pred chhhhhHHHHHHHHHHHhcCCC-CCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhc
Confidence 4566666555554333211111 011345678888999999999999999999999999999999999999999999888
Q ss_pred hchh-------hhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHH----hhccccCC
Q 047275 84 AAFN-------VYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLN----YGTQKIKG 152 (319)
Q Consensus 84 ~a~~-------~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~ 152 (319)
+... ..+|++.|++.|+|+|+.+|...++.+|.+.++.||...+..-..+..|++.+.++. ..+....+
T Consensus 133 ~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~ 212 (538)
T KOG0252|consen 133 LSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFN 212 (538)
T ss_pred cCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCC
Confidence 7632 368999999999999999999999999999999999865555444555544443333 22222211
Q ss_pred C--------cchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhcccc
Q 047275 153 G--------WGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTV 224 (319)
Q Consensus 153 ~--------~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (319)
. .=||..|.++.+|++++++.++.+|||+++.....++.+.|.+..+|.... +.++....+......
T Consensus 213 ~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~-----~~~~~~~~~~~~~~~ 287 (538)
T KOG0252|consen 213 GPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSV-----DIEAESTAESDVPPP 287 (538)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhcccccccc-----ccchhhccccCCCCc
Confidence 1 249999999999999999999999999999876666555554333333221 000000001111111
Q ss_pred ccc---hhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcCCCchhhHH--------HHHHHHHHHHHHHHH
Q 047275 225 KHP---FQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIKLSESTSLL--------MSAVVTGGVSTIATI 293 (319)
Q Consensus 225 ~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 293 (319)
+.. +..+|.+++.++++.+....+..- ...+....+...+++..+........ ...++.....++|+.
T Consensus 288 ~~~~~~F~~~f~~~hg~~Llgt~~~WFllD-iafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw 366 (538)
T KOG0252|consen 288 SNSFGLFSRLFLRWHGKHLLGTAGTWFLLD-IAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYW 366 (538)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhhh-hhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCcee
Confidence 122 333443445555554444433322 23344455566667766654432221 223333344556888
Q ss_pred HHHHHHHhcCCchHHHHhhHHhhh
Q 047275 294 TSMILTDKLGRKVLFLVGGILMFV 317 (319)
Q Consensus 294 ~~g~l~dr~Grr~~~~~g~~~~~~ 317 (319)
++..++|++|||+..+.|..++.+
T Consensus 367 ~tv~~id~iGRk~iq~~GF~~~~i 390 (538)
T KOG0252|consen 367 FTVYFIDIIGRKYIQLMGFFIMTI 390 (538)
T ss_pred EEEEEeehhhhHHHHHhhHHHHHH
Confidence 999999999999999999888765
No 16
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2e-25 Score=199.76 Aligned_cols=252 Identities=19% Similarity=0.232 Sum_probs=194.4
Q ss_pred hhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHH
Q 047275 16 VYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGR 95 (319)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R 95 (319)
..+++.+|++++ ....++..+.+-++..+++++...+.||+.||++++..+.+|.++++++++++||+.++++|
T Consensus 35 LLp~iA~dl~vs------~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR 108 (394)
T COG2814 35 LLPPIAADLGVS------EGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLAR 108 (394)
T ss_pred chHHHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 556667777654 47788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hc
Q 047275 96 VLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GA 174 (319)
Q Consensus 96 ~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~ 174 (319)
++.|++.|...+....+.++.+||++|++..+....+..++.+.+..++-+++ +.+|||..|.+....+++..+ .+
T Consensus 109 ~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig---~~~GWR~~F~~ia~l~ll~~~~~~ 185 (394)
T COG2814 109 ALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG---QLFGWRATFLAIAVLALLALLLLW 185 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888888777765555443 348999999987777666444 46
Q ss_pred ccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhh
Q 047275 175 LILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTG 254 (319)
Q Consensus 175 ~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (319)
..+| |+....+. +.+.++.++-.++++....+..+.+.....
T Consensus 186 ~~lP--~~~~~~~~------------------------------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~ 227 (394)
T COG2814 186 KLLP--PSEISGSL------------------------------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGH 227 (394)
T ss_pred HhCC--CccCCCCC------------------------------------CcchhHHHHHhcCchHHHHHHHHHHHHcch
Confidence 6678 22110000 011111122223455556666666666666
Q ss_pred hhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 255 INVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
+..++|..|++.+..+++.+. .....+..|+..++|++++|++.|| +.|+.+.....++.
T Consensus 228 F~~ftYi~P~L~~v~g~s~~~-vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a 287 (394)
T COG2814 228 FALYTYIRPFLESVAGFSVSA-VSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLA 287 (394)
T ss_pred hhhHHhHHHHHHHccCCCHhH-HHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHH
Confidence 677788888888888877554 4466778899999999999999999 77776655544443
No 17
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.93 E-value=6.2e-24 Score=195.33 Aligned_cols=269 Identities=18% Similarity=0.214 Sum_probs=174.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+++.+...++..+++++.|+++||+|||++++.+.++..++.++++++++++.+++.|+++|++.++..+....
T Consensus 44 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~ 123 (405)
T TIGR00891 44 LTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAA 123 (405)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHH
Confidence 35677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCCh
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~ 191 (319)
++.|++|+++|++..+....+..+|...+..+........ ..+||+.|.+..++.++..+....+||++++...+++ +
T Consensus 124 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 201 (405)
T TIGR00891 124 YVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW-GDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAG-K 201 (405)
T ss_pred HHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhh-h
Confidence 9999999999999988888888888766655543322111 1359999988777666555556678888765432211 1
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHH-HhcC
Q 047275 192 EKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLF-RTIK 270 (319)
Q Consensus 192 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 270 (319)
++..+..++..+.+....+. .++...+.+... +++.+..........+... .......+.|.++ ++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g 270 (405)
T TIGR00891 202 ALVRTMVDILYGGEHRIANI---------VMTLAAAMVQSA-GKRWPTFVYLVVLVLFANL-YSHPIQDLLPTYLKADLG 270 (405)
T ss_pred hhhhhHHHHHhccchhhhhh---------hhhhhHHhhhhh-hhhhHHHHHHHHHHHHHHH-HHhhhhhhhHHHHHHHhC
Confidence 11111111111110000000 000000011100 0111111111111111111 1223334556555 4456
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHH
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGIL 314 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~ 314 (319)
.+..+. .......++..+++.++.+++.||+|||+.+..+..+
T Consensus 271 ~s~~~~-~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~ 313 (405)
T TIGR00891 271 LSPHTV-ANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLA 313 (405)
T ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHH
Confidence 554433 3445566777889999999999999999887655443
No 18
>PRK15075 citrate-proton symporter; Provisional
Probab=99.93 E-value=4.2e-24 Score=199.15 Aligned_cols=231 Identities=21% Similarity=0.355 Sum_probs=153.2
Q ss_pred HHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhh--------HHHHHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 47 AGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVY--------MLILGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 47 g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~--------~li~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
+..+|+++.|+++||+|||+.++.+...+.+++.+++++++++ .++++|+++|++.|...+....+++|++|
T Consensus 68 ~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 147 (434)
T PRK15075 68 MRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIAT 147 (434)
T ss_pred HhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCC
Confidence 3357899999999999999999999999999999999999987 46999999999999999999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHhhcc-----ccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHH
Q 047275 119 PKHRGAFNIGFQVCTAIGVLGANLLNYGTQ-----KIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEK 193 (319)
Q Consensus 119 ~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~-----~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~ 193 (319)
+++|++..+....+..+|...+..++.... ...+.+|||++|.+..+...+..+.....||++.+...++
T Consensus 148 ~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~----- 222 (434)
T PRK15075 148 PGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH----- 222 (434)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh-----
Confidence 999999888777666555444333332211 1123579999998765543333332333444432110000
Q ss_pred HHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHh-cCCC
Q 047275 194 AKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRT-IKLS 272 (319)
Q Consensus 194 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 272 (319)
+ .+ .++.+++.. ++++....... ..+.+...++.+.+|.|.++++ .+.+
T Consensus 223 ------~----~~-----------------~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~~ 272 (434)
T PRK15075 223 ------R----PS-----------------MREIFRSLA--ANWRIVLAGML-MVAMTTVSFYLITVYTPTFGKTVLHLS 272 (434)
T ss_pred ------c----cc-----------------cccHHHHHH--HhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0 00 000011110 11122222222 2222344466777888988876 5766
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 273 ESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
..+. .+...+.++..+++.++.|+++||+|||+..+.+..
T Consensus 273 ~~~~-~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~ 312 (434)
T PRK15075 273 AADS-LLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTV 312 (434)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 5443 345566677788999999999999999998766543
No 19
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.92 E-value=1.1e-23 Score=195.71 Aligned_cols=256 Identities=16% Similarity=0.206 Sum_probs=175.1
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
++.+.+...+...++..+++++.|+++||+|||+++..+.+...++..+++++++++.++++|+++|++.|...+....+
T Consensus 51 s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~ 130 (426)
T PRK12307 51 TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTY 130 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChH
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHE 192 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~ 192 (319)
+.|++|+++|++..+....+..+|.+++..+.... .+..+||+.|.+..++.++........||++++...+.++++
T Consensus 131 ~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l---~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 207 (426)
T PRK12307 131 AVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSF---AEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKG 207 (426)
T ss_pred HHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHH---cccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccc
Confidence 99999999999999888888888876665443222 234689999988665544443333345666543211100000
Q ss_pred HHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcCCC
Q 047275 193 KAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIKLS 272 (319)
Q Consensus 193 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (319)
...++. .+..+.+++++++++..+......... +......+.+..+.|.++++.+.+
T Consensus 208 ---------~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~ 264 (426)
T PRK12307 208 ---------KHSQSA-------------WSVFSLSMKGLFNRAQFPLTLCVFIVL-FSIFGANWPIFGLLPTYLAGEGFD 264 (426)
T ss_pred ---------cccccc-------------hhhhhHHHHHHHhhchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 000000 000112344455443333222222222 222222233455777777776665
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 273 ESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
.... .....+.++..+++.++.+++.||+|||+....+.+++
T Consensus 265 ~~~~-~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~ 306 (426)
T PRK12307 265 TGVV-SNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMS 306 (426)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 4333 34445666778899999999999999998876665433
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=3.6e-23 Score=188.50 Aligned_cols=244 Identities=15% Similarity=0.107 Sum_probs=164.3
Q ss_pred hhhhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHH
Q 047275 12 FFPEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYML 91 (319)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~l 91 (319)
.+++..+.+.+|.+. ++.+.+++.+.++++..+++++.|+++||+|||+++..+......+......+++++.+
T Consensus 9 ~~~~~lp~i~~~~~~------s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 9 TFSPVLSLVAEDIDV------SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHHhhHHHHHHHhCc------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 345566666666653 45788899999999999999999999999999998776666555544333334799999
Q ss_pred HHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH-H
Q 047275 92 ILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI-L 170 (319)
Q Consensus 92 i~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~-~ 170 (319)
+++|+++|+|.|. .......++|++|+++|++..+....+..+|.+.+.+++..+. +++|||+.|.+.++++++ .
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~---~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY---TAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccchHHHHHHHHHHHHHHH
Confidence 9999999999996 4556667799999999999999999999999877766655443 247999999886665544 4
Q ss_pred HHhcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHH
Q 047275 171 TLGALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQ 250 (319)
Q Consensus 171 ~~~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 250 (319)
.+.++++||+|++.. +..+ . ++.. ++++++++. +.. +......++
T Consensus 159 ~~~~~~lp~~p~~~~---~~~~-~-------------~~~~--------------~~~~~ll~~---~~~-~~~~~~~~~ 203 (368)
T TIGR00903 159 ILVLAALPALPFQAA---EGFG-F-------------KDAV--------------KEFGALAGR---KDL-WIIGAILGF 203 (368)
T ss_pred HHHHHHcCCCCCCCC---CCcc-h-------------HHHH--------------HHHHHHHcC---hhH-HHHHHHHHH
Confidence 445667899986521 1000 0 0000 012334332 222 334344555
Q ss_pred hhhhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 047275 251 QLTGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRK 305 (319)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 305 (319)
.....+.+..|.|.++++.+.+.. ......+. ...+.+..+++.||..||
T Consensus 204 ~~~~~~~~~~wlp~~L~~~g~s~~--~~~~~~l~---~~~g~~g~~~~~d~~~r~ 253 (368)
T TIGR00903 204 GVALFDNLAIWLEAALRPAGLEDI--AGDAVALA---ILAGLIGVAVIPDRVARA 253 (368)
T ss_pred HHHHHHHHHHHHHHHHHHCCCChH--HHHHHHHH---HHHHHHHHHHhhHHhhhh
Confidence 556667778899999987765532 22222222 234445567888887654
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.91 E-value=2.8e-23 Score=196.75 Aligned_cols=286 Identities=12% Similarity=0.042 Sum_probs=183.9
Q ss_pred hhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHH
Q 047275 16 VYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGR 95 (319)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R 95 (319)
..+.+.+|.| .+.++.+++.+.+.++..++.++.|+++||+|||++++.+..++.++++++++++|++.++++|
T Consensus 28 a~p~i~~~l~------~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r 101 (495)
T PRK14995 28 AAPTLSMTLG------ASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATR 101 (495)
T ss_pred HHHHHHHHhC------CCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3444444544 3457788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhccchhhHHHHhcC-CCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHH-HHh
Q 047275 96 VLLGVGIGFSNQSVPLYLSEMA-PPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASIL-TLG 173 (319)
Q Consensus 96 ~l~Gig~g~~~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~ 173 (319)
+++|+|.++..+.....+.+.+ |+++|++..+.......+|...+..++..+. ++.+||+.|++....+++. .+.
T Consensus 102 ~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~---~~~gwr~~f~i~~~~~~~~~~l~ 178 (495)
T PRK14995 102 ALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL---EHFYWGSVFLINVPIVLVVMGLT 178 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccCChHHHHHHHHHHHHHHHHHH
Confidence 9999999999888877776665 7789999988888888888777666554332 3468999998876554443 334
Q ss_pred cccccCChhhHHhccCChHHHHH----------HHHHHc-CChhH-HHHH------HHHHHHHhhccccccchhh--hhc
Q 047275 174 ALILPDTPNSIIQRSNGHEKAKK----------MLQRVR-GTADV-QAEL------DDLIRASIVSRTVKHPFQT--IIQ 233 (319)
Q Consensus 174 ~~~l~es~~~~~~~~~~~~~a~~----------~~~~~~-~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~--l~~ 233 (319)
.+++||++... .++.|..+... .+++.. +..+. .... .........+.+.++|..+ +|+
T Consensus 179 ~~~l~~~~~~~-~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~ 257 (495)
T PRK14995 179 ARYVPRQAGRR-DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFT 257 (495)
T ss_pred HHhCCCCCCCC-CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhC
Confidence 55678765321 11111111100 000000 00000 0000 0000000111122334332 333
Q ss_pred ccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 234 RKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
. |.........++ .....+...++.|.+++.....+.........+.++...++.++.|++.||+|||+....+..
T Consensus 258 ~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~ 333 (495)
T PRK14995 258 H---RIILSGVVMAMT-AMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMA 333 (495)
T ss_pred C---cccHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 2 222222222222 223344556778888776544444445566667778888999999999999999988776665
Q ss_pred Hh
Q 047275 314 LM 315 (319)
Q Consensus 314 ~~ 315 (319)
++
T Consensus 334 ~~ 335 (495)
T PRK14995 334 LS 335 (495)
T ss_pred HH
Confidence 44
No 22
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.91 E-value=1e-22 Score=188.00 Aligned_cols=246 Identities=17% Similarity=0.209 Sum_probs=175.3
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++++.+.+.+...++..+++++.|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+...+....
T Consensus 47 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 126 (406)
T PRK11551 47 LDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIA 126 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH-HHHhcccccCChhhHHhccCC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI-LTLGALILPDTPNSIIQRSNG 190 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es~~~~~~~~~~ 190 (319)
++.|++|+++|++..+....+..+|...+..+.... .+..+||+.|.+.++..++ ..+...++||+|++...+++
T Consensus 127 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~- 202 (406)
T PRK11551 127 LTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLA---AGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA- 202 (406)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc-
Confidence 999999999999998888888888877666655332 2346899999876654443 33445568998765322111
Q ss_pred hHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcC
Q 047275 191 HEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIK 270 (319)
Q Consensus 191 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (319)
+++. ++. .+.+++....++... ....++......+....|.|.++++.+
T Consensus 203 ~~~~--------------~~~----------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~g 251 (406)
T PRK11551 203 GKQR--------------APV----------------LRALFGEGRATATLL-LWISYFFTLIVLYFLLNWLPSLLVGQG 251 (406)
T ss_pred chhh--------------hhh----------------HHHHhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 0000 000 000111111111111 112222223334555667888888777
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
.+..... ......++..+++.++.+++.||+|||+.+..+.+
T Consensus 252 ~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 293 (406)
T PRK11551 252 LSRSQAG-LVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYA 293 (406)
T ss_pred CChhhhh-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 6654433 44556667788999999999999999987665443
No 23
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=1.6e-22 Score=185.29 Aligned_cols=269 Identities=22% Similarity=0.284 Sum_probs=181.1
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+.+.+...++..+++++.|+++||+|||+.+..+..+..++.++..++++++.+++.|++.|++.+...+....
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 128 (398)
T TIGR00895 49 LDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNA 128 (398)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHH
Confidence 34577788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHH-HHHHHHHhcccccCChhhHHhccCC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAA-PASILTLGALILPDTPNSIIQRSNG 190 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~-~~~~~~~~~~~l~es~~~~~~~~~~ 190 (319)
++.|++|+++|++..+....+..+|...+..+.... .+.++||..+.+.+. ..+...+...++||++++...+ +
T Consensus 129 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 203 (398)
T TIGR00895 129 LVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL---IPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-R- 203 (398)
T ss_pred HHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH---hhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-C-
Confidence 999999999999988888888888876665544222 224689998887753 3333444566789988765433 2
Q ss_pred hHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcC
Q 047275 191 HEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIK 270 (319)
Q Consensus 191 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (319)
+++.++..++.......+.+ ++..+.....++.++..+.+++.+..++..... ...+......+....+.|++.++.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g 281 (398)
T TIGR00895 204 PETVRRIVNAIAPQMQAEAQ-SALPEQKATQGTKRSVFKALFQGKTARITVLLW-LLYFMLLVGVYFLTNWLPKLMVELG 281 (398)
T ss_pred HHHHHHHHHHHHHhcccccc-ccccccccccchhhHHHHHHhcchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 23333322222111000000 000000000000111223333333333333322 2233334445666778887777777
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLF 308 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~ 308 (319)
.+..... .......+..+++.++.+++.||+|||+..
T Consensus 282 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 318 (398)
T TIGR00895 282 FSLSLAA-TGGALFNFGGVIGSIIFGWLADRLGPRVTA 318 (398)
T ss_pred CCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcchHHHH
Confidence 7654433 445566777889999999999999999543
No 24
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.90 E-value=6.6e-23 Score=192.91 Aligned_cols=271 Identities=11% Similarity=0.033 Sum_probs=171.4
Q ss_pred hhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh-----hchhh
Q 047275 14 PEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG-----AAFNV 88 (319)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~-----~a~~~ 88 (319)
+...+.+.+|.+ .++.+.+++.+.++++..++.++.|+++||+|||+++..+.+...++.++.+ .++++
T Consensus 49 ~~~~~~i~~~~~------~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (467)
T PRK09556 49 KAAQNDMISTYG------LSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSL 122 (467)
T ss_pred hhhhHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchH
Confidence 333444455544 4568889999999999999999999999999999998887777666655544 46899
Q ss_pred hHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHh-hccccCCCcchHHHHHhhHHHH
Q 047275 89 YMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNY-GTQKIKGGWGWRISLSMAAAPA 167 (319)
Q Consensus 89 ~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~gWr~~f~~~~~~~ 167 (319)
+.+++.|+++|++.|...+....+++|++|+++||+..+....+..+|..++..+.. ...... ..+||..|.+.++..
T Consensus 123 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~-~~~~~~~f~~~g~~~ 201 (467)
T PRK09556 123 GLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF-DGHVIGMFIFPSIIA 201 (467)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc-cCcchhHHHHHHHHH
Confidence 999999999999999999999999999999999999888888777777665544432 222111 125898888766665
Q ss_pred HHHHH-hcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcc--cchhHHHHHH
Q 047275 168 SILTL-GALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQR--KYRPQLVMAI 244 (319)
Q Consensus 168 ~~~~~-~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~ 244 (319)
++..+ .+++.+|+|..... .++++ ..+ +....+++ ..++.+.+..+.+.+ .+++..+. .
T Consensus 202 ~~~~i~~~~~~~~~p~~~~~--~~~~~---~~~---~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~-~ 263 (467)
T PRK09556 202 LIIGFIGLRYGSDSPEELGW--GKAEE---IFG---EPISEEDK---------ETESTDMTKWQIFVEYVLKNPVIWL-L 263 (467)
T ss_pred HHHHHHHHHhCCCChhhcCC--CChhh---ccc---Cccchhhh---------ccccccCcHHHHHHHHHHcChHHHH-H
Confidence 54433 34455666643110 00111 000 00000000 000001111121111 11233333 3
Q ss_pred HHHHHHhhhhhhHhHhhhHHHHH-hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Q 047275 245 LIPFFQQLTGINVISFYAPVLFR-TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLV 310 (319)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 310 (319)
....+......+...+|.|.+++ +.+.+..+.. .......+...++.++.|+++||+|||+..+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~-~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~ 329 (467)
T PRK09556 264 CFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAI-NTFTLFEIGALVGSLLWGWLSDLANGRRALVA 329 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 33333333344556788887775 4566654443 44455566788999999999999999876544
No 25
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=5.9e-23 Score=193.81 Aligned_cols=275 Identities=17% Similarity=0.170 Sum_probs=178.9
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
++++.+++.+.+.++..++.++.|+++||+|||+.++.+.+++.++..+++.++|++.++++|+++|++.|...+....+
T Consensus 35 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~ 114 (485)
T TIGR00711 35 SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFST 114 (485)
T ss_pred ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH-HhcccccCChhhHHhccCCh
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT-LGALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~es~~~~~~~~~~~ 191 (319)
+.|++|+++|++..+....+..+|...+..++... .++++||+.|.+....+++.. +..+++||+++.. .++.|.
T Consensus 115 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~ 190 (485)
T TIGR00711 115 LLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWI---IENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAA-SENFDF 190 (485)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHh---ccCcCceehhhhhhHHHHHHHHHHHHHcCCccccc-cCCCcH
Confidence 99999999999998888888888876665544322 235789999988766655433 3344566654311 111111
Q ss_pred HHHHH----------HHHHHcCChh-HHHHHHHH--------HHHHhhccccccchh--hhhcccchhHHHHHHHHHHHH
Q 047275 192 EKAKK----------MLQRVRGTAD-VQAELDDL--------IRASIVSRTVKHPFQ--TIIQRKYRPQLVMAILIPFFQ 250 (319)
Q Consensus 192 ~~a~~----------~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~ 250 (319)
..... ...+...... ...+.... ......+.+.+++.. ++++.+ +........++
T Consensus 191 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~- 266 (485)
T TIGR00711 191 LGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYR---NFTIGCVYMSL- 266 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCC---ChHHHHHHHHH-
Confidence 11000 0000000000 00000000 000000111222322 233222 22222222222
Q ss_pred hhhhhhHhHhhhHHHHHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 251 QLTGINVISFYAPVLFRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
.....+...++.|.++++ .+.+..+ ......+.++..+++.++.+++.||+|||++...+..++.
T Consensus 267 ~~~~~~~~~~~~p~~~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~ 332 (485)
T TIGR00711 267 LGLGLYGSFYLLPLYLQQVLGYTALQ-AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYA 332 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Confidence 223345556678888765 4555433 4455666777888999999999999999998777665544
No 26
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.90 E-value=3.2e-22 Score=182.86 Aligned_cols=235 Identities=23% Similarity=0.340 Sum_probs=160.8
Q ss_pred HHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhh--------HHHHHHHHHhhhhhhccchhhHHHHh
Q 047275 44 PFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVY--------MLILGRVLLGVGIGFSNQSVPLYLSE 115 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~--------~li~~R~l~Gig~g~~~~~~~~~i~e 115 (319)
.+++..+++++.|+++||+|||++++.+.++..++.+++++++++. .+++.|+++|++.+...+....+++|
T Consensus 44 ~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 123 (394)
T TIGR00883 44 GFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAE 123 (394)
T ss_pred HHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhh
Confidence 3445567999999999999999999999999999999999998875 58999999999999999999999999
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccc-----cCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCC
Q 047275 116 MAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQK-----IKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNG 190 (319)
Q Consensus 116 ~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-----~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~ 190 (319)
+.|+++|++..+....+..+|.+.+..+...... ..+.++||++|.+..+..++..+.....||++++...+++
T Consensus 124 ~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (394)
T TIGR00883 124 YAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK- 202 (394)
T ss_pred cCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc-
Confidence 9999999999888888888887766554432211 1134799999988776655544444556776543211000
Q ss_pred hHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH-hc
Q 047275 191 HEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR-TI 269 (319)
Q Consensus 191 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 269 (319)
.++.+.+.++.++++ +++........ +......+....+.|.+++ +.
T Consensus 203 ------------------------------~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
T TIGR00883 203 ------------------------------HKKKRGPIRETLTKH-RKPFLLGLGLV-IATTTTFYLITTYLPTYLTQTL 250 (394)
T ss_pred ------------------------------cccccCCHHHHHHhc-hHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 000112233333222 12233333332 2333334555667777774 45
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhh
Q 047275 270 KLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGG 312 (319)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~ 312 (319)
+.+... ......+..+...++.++.+++.||+|||+..+.+.
T Consensus 251 g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~ 292 (394)
T TIGR00883 251 GLSANS-ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFT 292 (394)
T ss_pred CCChhH-HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 555443 334455666778889999999999999998765433
No 27
>PRK03545 putative arabinose transporter; Provisional
Probab=99.90 E-value=3.4e-22 Score=183.77 Aligned_cols=242 Identities=17% Similarity=0.193 Sum_probs=167.1
Q ss_pred hcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHH
Q 047275 17 YKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRV 96 (319)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~ 96 (319)
.+.+.+|.+ .++.+.++..+.+.++..+++++.|++.||+|||+++..+..++.++.+++++++|++.++++|+
T Consensus 32 ~~~l~~~~~------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 105 (390)
T PRK03545 32 LSDIAQSFH------MQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRI 105 (390)
T ss_pred hHHHHhHcC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 344444554 45688889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hcc
Q 047275 97 LLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GAL 175 (319)
Q Consensus 97 l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~ 175 (319)
++|++.+...+....++.|++|+++|++..+....+..+|...+..+..... +..|||+.|.+.++..++..+ ...
T Consensus 106 ~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~---~~~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 106 GIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG---QYLGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH---HHhcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988888888888766655443321 236899999887776555433 334
Q ss_pred cccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhh
Q 047275 176 ILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGI 255 (319)
Q Consensus 176 ~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (319)
.+||+|+. + +++. + + .++.+++ ++........++......
T Consensus 183 ~~~~~~~~-----~-~~~~----~----------~-----------------~~~~~~~---~~~~~~~~~~~~~~~~~~ 222 (390)
T PRK03545 183 LLPLLPSE-----H-SGSL----K----------S-----------------LPLLFRR---PALVSLYLLTVVVVTAHF 222 (390)
T ss_pred hCCCCCCC-----C-cchH----H----------H-----------------HHHHHhC---cHHHHHHHHHHHHHHHHH
Confidence 45665321 0 0000 0 0 0111111 111112222222222222
Q ss_pred hHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Q 047275 256 NVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLF 308 (319)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~ 308 (319)
....+..|++.++.+.+..... ......++..+++.+..+++.||+|||.+.
T Consensus 223 ~~~~~~~~~l~~~~g~s~~~~~-~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 274 (390)
T PRK03545 223 TAYSYIEPFVQQVAGLSENFAT-LLLLLFGGAGIIGSVLFSRLGNRHPSGFLL 274 (390)
T ss_pred HHHHHHHHHHHHhcCCCccHHH-HHHHHHHHHHHHHHHHHHHHhhccchhHHH
Confidence 2233334444444566554433 444556677899999999999999988653
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.90 E-value=3.3e-22 Score=184.11 Aligned_cols=250 Identities=14% Similarity=0.130 Sum_probs=172.9
Q ss_pred hhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHH
Q 047275 14 PEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLIL 93 (319)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~ 93 (319)
++..+.+.+|.+. +..+.++..+.+.++..+++++.|++.||+|||+++..+..++.++.+++++++|++.+++
T Consensus 29 ~~~lp~i~~~~~~------s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~ 102 (393)
T PRK09705 29 GPLLPQLRQASGM------SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLS 102 (393)
T ss_pred chhHHHHHHHhCC------CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHH
Confidence 5566677666653 4578899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHH-hhccccCCCcchHHHHHhhHHHHHHHHH
Q 047275 94 GRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLN-YGTQKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 94 ~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
+|+++|++.|...+....++.|++| ++|++..+....+...|...+..+. +..+. ..+||..+.+.+++.++..+
T Consensus 103 ~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~---~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 103 SALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH---SETWYQTLAWWALPAVVALF 178 (393)
T ss_pred HHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 7899988888777766655544433 22221 13799887665555443333
Q ss_pred hcccc-cCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHh
Q 047275 173 GALIL-PDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQ 251 (319)
Q Consensus 173 ~~~~l-~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 251 (319)
.++.. ++.|+ +++. +...+ ++.+ ++++.+... ..++..
T Consensus 179 ~~~~~~~~~~~--------~~~~----------------------------~~~~~-~~~l---~~~~~~~l~-~~~~~~ 217 (393)
T PRK09705 179 AWWWQSAREVA--------SSHK----------------------------TTTTP-VRVV---FTPRAWTLG-VYFGLI 217 (393)
T ss_pred HHHHHhcCCCc--------cccC----------------------------CCcCC-cccc---cCHhHHHHH-HHHHHH
Confidence 22222 11111 0000 00000 1111 112222222 222223
Q ss_pred hhhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 252 LTGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
...+.....|.|.++++.+.+.... .....+.++..+++.+..+++.||+|||+..+.+..++
T Consensus 218 ~~~~~~~~~~lp~~l~~~g~s~~~a-g~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~ 280 (393)
T PRK09705 218 NGGYASLIAWLPAFYIEIGASAQYS-GSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQ 280 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhh-hHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 3445566677787777766665433 34555677888999999999999999998876665443
No 29
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=3.1e-22 Score=181.87 Aligned_cols=244 Identities=14% Similarity=0.108 Sum_probs=163.6
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.+..+.++..+...++..+++++.|+++||+|||+++..+.++..++.+++++++|++.++++|+++|++.|...+....
T Consensus 35 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 114 (377)
T TIGR00890 35 VGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALN 114 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHH-HHHHHhhccccCCCcchHHHHHhhHHHHHHHHHh-cccccCChhhHHhccC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLG-ANLLNYGTQKIKGGWGWRISLSMAAAPASILTLG-ALILPDTPNSIIQRSN 189 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~es~~~~~~~~~ 189 (319)
++.|++| ++|++..+....+..+|.+. +.+..... +.++||+.|.+.++..++..+. .++++|.|+.. .+++
T Consensus 115 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 188 (377)
T TIGR00890 115 TAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVI----NLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL-IKTN 188 (377)
T ss_pred HHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHH----hcccHHHHHHHHHHHHHHHHHHHHHheecCchhc-cccC
Confidence 8899987 57999888888888887553 34444332 2368999998877766554433 34455443210 0000
Q ss_pred ChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhc
Q 047275 190 GHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTI 269 (319)
Q Consensus 190 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (319)
++. .+. +...++.+++ ++........+..... ......+.+.+.++.
T Consensus 189 --~~~----------~~~-----------------~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 235 (377)
T TIGR00890 189 --IEV----------SVK-----------------DYTVWEMLRT---PQFWVLYLSFFLNAVS-GLLLIGLYKPYGQSL 235 (377)
T ss_pred --ccc----------chh-----------------hhhHHHHHcC---ccHHHHHHHHHHHhHH-HHHHHHHHHHHHHHc
Confidence 000 000 0001112211 1111112111211122 222223344455666
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 270 KLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
+.+... ......+.++...++.+..+++.||+|||+.+..+..++
T Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 280 (377)
T TIGR00890 236 GLSDGF-LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGIS 280 (377)
T ss_pred CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 655433 334455667778899999999999999998876655444
No 30
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.90 E-value=2.2e-22 Score=183.71 Aligned_cols=255 Identities=16% Similarity=0.097 Sum_probs=172.4
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+++.+...++..+++++.|+++||+|||+++..+.++..++..+.+++++++.++++|+++|++.+...+....
T Consensus 26 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 105 (399)
T TIGR00893 26 LSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIIL 105 (399)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hcccccCChhhHHhccCC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GALILPDTPNSIIQRSNG 190 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~es~~~~~~~~~~ 190 (319)
++.|++|+++|++..+.......+|.+.+..+..... +..+||+.|.+.++..++..+ .....||+|+.. +..+
T Consensus 106 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 180 (399)
T TIGR00893 106 IVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWIL---IHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKA--KWLT 180 (399)
T ss_pred HHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHH---HhCCchHHHHHHHHHHHHHHHHhhheecCCCCcc--ccCC
Confidence 9999999999999988888888888776655543321 235799999887766555433 344566665321 1111
Q ss_pred hHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHh-c
Q 047275 191 HEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRT-I 269 (319)
Q Consensus 191 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 269 (319)
+++.....++...+ . +.....++.....++.++ +++... .....+......+....+.|.++++ .
T Consensus 181 ~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (399)
T TIGR00893 181 EEEKYIVVGGLLAE---------Q-QGKGPSTPKKYQIKELLK---DRRVWG-LALGQFLVNIGLGFFLTWFPTYLVQER 246 (399)
T ss_pred HHHHhhcchhhccc---------c-ccccccCCCccchHHHhc---CHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 11110000000000 0 000001111222333332 233333 3333333344455666677777654 4
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 047275 270 KLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKV 306 (319)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~ 306 (319)
+.+.. ..........+..+++.++.+++.||+|||+
T Consensus 247 ~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 247 GLSIL-EAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred cccHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 54433 3334455667778899999999999999996
No 31
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=8e-22 Score=180.84 Aligned_cols=249 Identities=15% Similarity=0.180 Sum_probs=169.5
Q ss_pred hhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHH
Q 047275 16 VYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGR 95 (319)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R 95 (319)
..+.+.+|.+ .+..+.++..+...++..+++++.|++.||+|||+++..+..+..++.+++++++|++.+++.|
T Consensus 25 ~l~~~~~~~g------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r 98 (382)
T PRK10091 25 VLTELAHDVG------ISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGR 98 (382)
T ss_pred ChHHHHHHcC------CCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 3444444544 3457788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH-Hhc
Q 047275 96 VLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT-LGA 174 (319)
Q Consensus 96 ~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~ 174 (319)
+++|++.|...+....++.|+.|+++|++..+....+..+|...+..++..+ .+.++||+.|.+.++...+.. ...
T Consensus 99 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l---~~~~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 99 LVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL---SQEFSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred HHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH---hhhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888889999999999999888777777777766554443322 224689999988776554433 334
Q ss_pred ccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhh
Q 047275 175 LILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTG 254 (319)
Q Consensus 175 ~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (319)
.++||.++. .+ .+ . ++. + +.++ +++.+.......+.. .+
T Consensus 176 ~~lp~~~~~----~~-~~-~-------------~~~-----------------~-~~~~---~~~~~~~~~~~~~~~-~~ 214 (382)
T PRK10091 176 FWVPDIRDE----AK-GG-L-------------REQ-----------------F-HFLR---SPAPWLIFAATMFGN-AG 214 (382)
T ss_pred HhCCCCCcc----cc-cC-H-------------HHH-----------------H-HHhc---ChHHHHHHHHHHHHH-HH
Confidence 557775321 00 00 0 000 0 0010 111111111111111 12
Q ss_pred hhH-hHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 255 INV-ISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 255 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
.+. ..+..|++.+..+.+... ......+.++..+++.++.+++.||+|+|++...+..++
T Consensus 215 ~~~~~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~ 275 (382)
T PRK10091 215 VFAWFSYIKPYMMFISGFSETS-MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFII 275 (382)
T ss_pred HHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHH
Confidence 222 233345554556665544 334555667788899999999999999998876655443
No 32
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.89 E-value=3.7e-22 Score=179.98 Aligned_cols=251 Identities=23% Similarity=0.366 Sum_probs=169.6
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+++.+...++..+++++.|+++||+|||++++.+.++..++.++..+++|++.++++|+++|++.+...+....
T Consensus 29 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 108 (352)
T PF07690_consen 29 LSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNA 108 (352)
T ss_dssp TTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccc
Confidence 35678889999999999999999999999999999999999999999776667788889999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hcccccCChhhHHhccCC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GALILPDTPNSIIQRSNG 190 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~es~~~~~~~~~~ 190 (319)
++.|++|+++|++..+....+..+|.+.+..++.... +.++||+.|.+.++..++..+ ...+++++++....+.++
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~---~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~ 185 (352)
T PF07690_consen 109 LIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI---SYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPK 185 (352)
T ss_dssp HHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SST
T ss_pred cccccchhhhhhhccccccchhhhhhhcccchhhhhh---hccccccccccccchhhhhhhhHhhhhhhccccccccccc
Confidence 9999999999999999999999999877766654432 346899999888877666544 234555554432211111
Q ss_pred hHHHHHHHHHHcCChhHHHHHHHHHHHHhhcccccc-chhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHH-HHh
Q 047275 191 HEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKH-PFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVL-FRT 268 (319)
Q Consensus 191 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 268 (319)
+++ ++ .++... .++.+++++. .+......+...........+.|.+ .+.
T Consensus 186 ~~~--------------~~-----------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (352)
T PF07690_consen 186 ESE--------------SK-----------KPKPLKPGFKSLFKNPV----LWILLIAFFLFFFVFSGFSFFLPLYLQEV 236 (352)
T ss_dssp TTT---------------------------HHHCCCH-CTHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_pred ccc--------------cc-----------cccccccccccccccch----hhhhhhhhhHHHHHHHHhhcccchhhhhc
Confidence 110 00 000000 1222221111 1122222333333345566778877 455
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHH
Q 047275 269 IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGIL 314 (319)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~ 314 (319)
.+.+..........+.+....++.++.+++.||+|+|+........
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 282 (352)
T PF07690_consen 237 LGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILL 282 (352)
T ss_dssp HHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 6666122333445566677778899999999999987665444433
No 33
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.89 E-value=1e-21 Score=183.06 Aligned_cols=248 Identities=14% Similarity=0.111 Sum_probs=167.4
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
+++.+.+.+.+.+.++..+++++.|++.||+|||+++..+.++..++.++.+++++++.+++.|++.|++.|...+....
T Consensus 55 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~ 134 (434)
T PRK11663 55 LSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAK 134 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHH-HHhcccccCChhhHHhccCC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASIL-TLGALILPDTPNSIIQRSNG 190 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~~~~l~es~~~~~~~~~~ 190 (319)
++.|++|+++|++..+..+.+..+|...+..+...+ .+.++||+.|.+.++..++. .+..++++|+|.+......+
T Consensus 135 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l---~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~ 211 (434)
T PRK11663 135 LLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI---ALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVG 211 (434)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcc
Confidence 999999999999998888888888876655433222 12478999998877665443 33445678877542111000
Q ss_pred hHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcc--cchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH-
Q 047275 191 HEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQR--KYRPQLVMAILIPFFQQLTGINVISFYAPVLFR- 267 (319)
Q Consensus 191 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 267 (319)
++ .++. + +..+ +.+..+.+.++.++. .+.++.+ .....++......+.+..|.|.+++
T Consensus 212 ~~-~~~~-~------~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~l~~ 272 (434)
T PRK11663 212 EW-RHDA-L------ELAQ----------QQEGAGLSRKEILTKYVLLNPYIW-LLSFSYVLVYVVRAAINDWGNLYMSE 272 (434)
T ss_pred cc-cccc-c------ccch----------hccccCCChhhhHHHHHhcChHHH-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0000 0 0000 000001112222211 1112222 2333333333334556667787774
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 047275 268 TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKL 302 (319)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 302 (319)
+.+.+..... ....+..+...++.++.|++.||+
T Consensus 273 ~~g~s~~~a~-~~~~~~~~~~~~g~~~~g~l~dr~ 306 (434)
T PRK11663 273 TLGVDLVTAN-SAVSMFELGGFIGALVAGWGSDKL 306 (434)
T ss_pred ccCCCHHHHH-HHHHHHHHHHHHHHHHHhhhHHHh
Confidence 4566554433 445566677889999999999999
No 34
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.89 E-value=2e-21 Score=177.48 Aligned_cols=257 Identities=15% Similarity=0.146 Sum_probs=175.1
Q ss_pred hhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHH
Q 047275 14 PEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLIL 93 (319)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~ 93 (319)
.|..+.+.+|.+ .++.+.+...+...++..++.++.|+++||+|||+++..+.++..++..++.++++++.+++
T Consensus 11 ~p~~~~~~~~~~------~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 11 LPALPVIAADFG------VSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred hccHHHHHHHhC------CCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 344455444544 34678888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH-H
Q 047275 94 GRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT-L 172 (319)
Q Consensus 94 ~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~ 172 (319)
.|+++|++.+...+....++.|++|+++|++..+.......+|...+..++.... +.++||+.|.+.+...++.. +
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL---VWFSWHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHcChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888888877887666655443222 23689999987666655433 3
Q ss_pred hcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhh
Q 047275 173 GALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQL 252 (319)
Q Consensus 173 ~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 252 (319)
..+++||+++.. ++++. +.+.+ .++++++++. ++....... .....
T Consensus 162 ~~~~~~~~~~~~---~~~~~-------------~~~~~--------------~~~~~~~~~~---~~~~~~~~~-~~~~~ 207 (377)
T PRK11102 162 VFFFIPETLPKE---RRQPF-------------HLRTT--------------IRNFASLFRH---KRVLGYMLA-SGFSF 207 (377)
T ss_pred HHHhCCccCccc---ccCCC-------------ChHHH--------------HHHHHHHHcC---hHHHHHHHH-HHHHH
Confidence 345667764310 00000 00000 0011222221 222222222 22222
Q ss_pred hhhhHhHhhhHHHH-HhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHH
Q 047275 253 TGINVISFYAPVLF-RTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGIL 314 (319)
Q Consensus 253 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~ 314 (319)
.+.+....+.|.++ +..+.+..+ ........++..+++.+..+++.||+|||+....+..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~ 269 (377)
T PRK11102 208 AGMFSFLTAGPFVYIELNGVSPQN-FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWI 269 (377)
T ss_pred HHHHHHHHcCHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 33344444555544 455666443 33455566777889999999999999999877665543
No 35
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.89 E-value=2.2e-21 Score=177.46 Aligned_cols=244 Identities=15% Similarity=0.123 Sum_probs=168.4
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.++..+...++..+++++.|++.||+|||+++..+.++..++.++.+.+++++.+++.|+++|++.+...+....
T Consensus 37 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 116 (385)
T TIGR00710 37 TPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQA 116 (385)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH-HhcccccCChhhHHhccCC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT-LGALILPDTPNSIIQRSNG 190 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~es~~~~~~~~~~ 190 (319)
++.|++|+++|++..+..+....+|...+..+..... +.++||+.+.+.++..++.. +..+..||+++.. +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 188 (385)
T TIGR00710 117 LVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL---VWLSWHAIFAFLSLAGILLSALIFFILPETLPYE----A- 188 (385)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc----c-
Confidence 9999999999999888888888877665554433221 23689999887666554433 3344567764321 0
Q ss_pred hHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH-hc
Q 047275 191 HEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR-TI 269 (319)
Q Consensus 191 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 269 (319)
+++. ++.. +.+++.++. ++..... ..........+....+.|.+++ +.
T Consensus 189 ~~~~-------------~~~~--------------~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (385)
T TIGR00710 189 RIQI-------------STYF--------------ETFLLLLKS---KMFWGYA-LIYGASFGGFFAFFSGAPFVYIDIM 237 (385)
T ss_pred cCCH-------------HHHH--------------HHHHHHHcC---chhHHHH-HHHHHHHHHHHHHHHcChHHHHHHc
Confidence 0000 0000 001112211 1111111 1111122233444556677665 45
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 270 KLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
+.+... ........++..+++.++.+++.||+|||+....+..++
T Consensus 238 g~~~~~-~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 282 (385)
T TIGR00710 238 GVSPSV-FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILF 282 (385)
T ss_pred CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 555443 334455666778899999999999999998766554443
No 36
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.89 E-value=8.4e-21 Score=179.78 Aligned_cols=277 Identities=15% Similarity=0.185 Sum_probs=174.7
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.+..+.+++.+..+++..+++++.|+++||+|||++++.+.++..++.++.+++++++.+++.|++.|++.++..+....
T Consensus 52 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~ 131 (496)
T PRK03893 52 LTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSAT 131 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCCh
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~ 191 (319)
++.|++|+++|++..+....+..+|...+..+...+ .+.++||+.|.+..++.++..+....+||++++...+++ .
T Consensus 132 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l---~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~ 207 (496)
T PRK03893 132 YVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV---VPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAG-K 207 (496)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccc-c
Confidence 999999999999988888888888876665544322 235789999987666655554455667887665322111 1
Q ss_pred HHHHHHHHHHcCChhHHHHHHH-HHH----HHhhccccccch-------------hhhh-c-ccchhHHHHHHHHHHHHh
Q 047275 192 EKAKKMLQRVRGTADVQAELDD-LIR----ASIVSRTVKHPF-------------QTII-Q-RKYRPQLVMAILIPFFQQ 251 (319)
Q Consensus 192 ~~a~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~-------------~~l~-~-~~~~~~~~~~~~~~~~~~ 251 (319)
++.++..+.....+........ ... ............ .... + ...+...........+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (496)
T PRK03893 208 APVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFA 287 (496)
T ss_pred ccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 1111111111000000000000 000 000000000000 0000 0 011111122222222222
Q ss_pred hhhhhHhHhhhHHHHH-hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 252 LTGINVISFYAPVLFR-TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 252 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
....+....+.|.+++ ..+.+... .........+...++.++.+++.||+|||+.++.+..
T Consensus 288 ~~~~~~~~~~lp~~l~~~~g~~~~~-~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~ 349 (496)
T PRK03893 288 FLYSWPIQALLPTYLKTDLGYDPHT-VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLL 349 (496)
T ss_pred HhccchHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 2222234567788875 55665543 3345556677788999999999999999988665543
No 37
>PRK03699 putative transporter; Provisional
Probab=99.89 E-value=2.7e-21 Score=178.08 Aligned_cols=251 Identities=11% Similarity=0.038 Sum_probs=167.8
Q ss_pred hhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHH
Q 047275 14 PEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLIL 93 (319)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~ 93 (319)
+...+.+.++.+ .++.+.+.+.+...++..+++++.|++.||+|||+++..+..+..++..+++++++++.+++
T Consensus 27 g~~~~~i~~~~~------~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 100 (394)
T PRK03699 27 GMVMGPIAEYFN------LPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSI 100 (394)
T ss_pred hhhhHHHHHHhC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHH
Confidence 444444444443 45677888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHHHHH
Q 047275 94 GRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 94 ~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
.|+++|++.|...+....++.|++|+++|+...+.......+|...+. +.++... ..++||+.|.+.+++.++..+
T Consensus 101 ~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~gw~~~f~~~~~~~~~~~~ 177 (394)
T PRK03699 101 AMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA---RSIEWYWVYACIGLVYVAIFI 177 (394)
T ss_pred HHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccHHHHHHHHHHHHHHHHH
Confidence 999999999999998999999999999999877666666666544333 3333322 236899999876666544333
Q ss_pred hcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhh
Q 047275 173 GALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQL 252 (319)
Q Consensus 173 ~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 252 (319)
..++ .+.|+. .+++ ++ + + .+..+ ...+++.. ......+...
T Consensus 178 ~~~~-~~~p~~--~~~~--~~---------~--~--------------~~~~~--------~~~~~~~~-~~~~~~~~~~ 218 (394)
T PRK03699 178 LTLF-SEFPAL--GKHA--PK---------A--D--------------KPVAK--------EKWGIGVL-FLAIAALLYI 218 (394)
T ss_pred HHHh-cCCccc--cccC--cc---------c--c--------------Ccccc--------ccCChHHH-HHHHHHHHHH
Confidence 2222 222210 0000 00 0 0 00000 01122222 2223333333
Q ss_pred hhhhHhHhhhHHHHH-hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 253 TGINVISFYAPVLFR-TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 253 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
...+.+..|.|.+++ +.+.+..+.. ...........++.++.++++||++||+.+.....
T Consensus 219 ~~~~~~~~~~p~~l~~~~g~s~~~~~-~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~ 279 (394)
T PRK03699 219 LAQLTFISWVPEYAQKKFGMSLEDAG-NLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAG 279 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHhh-HHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Confidence 344556678888875 4566654433 33445556678999999999999999987665443
No 38
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.88 E-value=1.1e-21 Score=184.46 Aligned_cols=252 Identities=17% Similarity=0.149 Sum_probs=174.6
Q ss_pred cccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--hhhhHHHHHHHHHhhhhhhccc
Q 047275 30 CKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--FNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--~~~~~li~~R~l~Gig~g~~~~ 107 (319)
.+.++.+.+.+.+.++++..+++++.|+++||+|||+++..+.++..++.+++..+ .+++.+++.|+++|++.++..+
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~ 150 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSP 150 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchh
Confidence 34567788899999999999999999999999999999999999999988876544 5688999999999999999999
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCc-chHHHHHhhHHHHHHHHHhc-ccccCChhhHH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGW-GWRISLSMAAAPASILTLGA-LILPDTPNSII 185 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-gWr~~f~~~~~~~~~~~~~~-~~l~es~~~~~ 185 (319)
....+++|++|+++|+++.+....+..+|.+++..+...+. +.+ +||+.|.+.++++++..+.+ .+.+|+|+...
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~---~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~ 227 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC---ESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP 227 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC
Confidence 99999999999999999999988888888766655543322 233 89999998887766654443 44567664311
Q ss_pred hccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHH
Q 047275 186 QRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVL 265 (319)
Q Consensus 186 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (319)
..++++. +..++. .+.+....+.+.+++++++. + ..+......+......+.+..|.|.+
T Consensus 228 --~~~~~~~-~~i~~~-------------~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~lp~~ 287 (465)
T TIGR00894 228 --CISKFEK-KYINSS-------------LQGQKGSTRQSLPIKAIPKS---L-PVWAIWFAIFGHFWLYTILPTYLPTF 287 (465)
T ss_pred --CCCHHHH-HHHHhh-------------cccccCCCCCCCCHHHHhcC---H-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0101111 111100 00000001112345554432 2 23344444555555667777888888
Q ss_pred HHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 047275 266 FRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRK 305 (319)
Q Consensus 266 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 305 (319)
+++ .+.+..... ....+..+...++.+++|+++||.++|
T Consensus 288 l~~~~g~s~~~~g-~~~~~~~~~~~i~~~~~g~l~d~~~~~ 327 (465)
T TIGR00894 288 ISWVLRVSGKENG-LLSSLPYLFAWLCSIFAGYLADFLKSS 327 (465)
T ss_pred HHHHhCcChHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 754 566554433 445556677889999999999998754
No 39
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.88 E-value=1e-21 Score=178.58 Aligned_cols=254 Identities=15% Similarity=0.142 Sum_probs=157.5
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhch-hhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAF-NVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~-~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
.++.+.+++.+...++..+++++.|+++||+|||+.++.+.++..++.+++++++ +++.+++.|+++|++.+. .+...
T Consensus 34 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~ 112 (366)
T TIGR00886 34 LSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCM 112 (366)
T ss_pred CCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHH
Confidence 4567888999999999999999999999999999999999999999999999999 999999999999999654 56678
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-----Hhhccc--cCCCcchHHHH-HhhHHH-HHHHHHhcccccCCh
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-----NYGTQK--IKGGWGWRISL-SMAAAP-ASILTLGALILPDTP 181 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-----~~~~~~--~~~~~gWr~~f-~~~~~~-~~~~~~~~~~l~es~ 181 (319)
.+++|++|+++|++..+.......+|...+..+ ...... ..+..+||+.| ...++. .+...+.....+|+|
T Consensus 113 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 113 PWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred HHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 899999999999998777764444543333222 211111 01235799888 333333 233333445567765
Q ss_pred hhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhh
Q 047275 182 NSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFY 261 (319)
Q Consensus 182 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (319)
+.. + +++ +...++ .....+. +..+...+.++. ++.+. ....++......+.+..+
T Consensus 193 ~~~----~-~~~-~~~~~~--~~~~~~~-------------~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~ 247 (366)
T TIGR00886 193 PGK----P-ATG-KLSFKG--ARWSVGT-------------GALGDQLKVFRD---RHTWI-LALLYSVTFGSFLGVSSI 247 (366)
T ss_pred ccc----c-cch-hccccc--ccccccc-------------hhHHHHHHHHhc---cchhh-HHHHHHHHHHHHHHHHHH
Confidence 421 0 000 000000 0000000 000011222221 22222 222223233334455566
Q ss_pred hHHHHHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhh
Q 047275 262 APVLFRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGG 312 (319)
Q Consensus 262 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~ 312 (319)
.|.++++ .+.+..+. .....+..+..+++.++.+++.||+|||+....+.
T Consensus 248 ~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~ 298 (366)
T TIGR00886 248 FAMFFKDQFGLSKVTA-GAYASLGGLLGSLARPLGGAISDRLGGARKLLMSF 298 (366)
T ss_pred HHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHhhccchHHHhhccchhHHHHH
Confidence 6777654 46554433 34445566777889999999999999987654444
No 40
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.88 E-value=3.9e-21 Score=177.02 Aligned_cols=231 Identities=18% Similarity=0.213 Sum_probs=162.6
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+...+...++..+++++.|++.||+|||++++.+.+++.++.++++++++++.+++.|+++|++.|...+....
T Consensus 52 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 131 (394)
T PRK10213 52 ISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSAS 131 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 35677888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHh-cccccCChhhHHhccCC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLG-ALILPDTPNSIIQRSNG 190 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~es~~~~~~~~~~ 190 (319)
++.|++|+++|++..+....+..+|.+.+..++..+. +.++||+.|.+.++.+++..+. ....||+|++ +
T Consensus 132 ~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~---~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~-----~- 202 (394)
T PRK10213 132 LTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG---ELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGE-----P- 202 (394)
T ss_pred HHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcc-----c-
Confidence 9999999999999888888878888766655544332 3478999998876655443332 3346665421 0
Q ss_pred hHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhH-hHhhhHHHHHhc
Q 047275 191 HEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINV-ISFYAPVLFRTI 269 (319)
Q Consensus 191 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 269 (319)
++.. + ..++.+ ++++.+..... .+........ ..+..|.+.++.
T Consensus 203 -~~~~-------------~-----------------~~~~~l---~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~ 247 (394)
T PRK10213 203 -SHQK-------------Q-----------------NTFRLL---QRPGVMAGMIA-IFMSFAGQFAFFTYIRPVYMNLA 247 (394)
T ss_pred -ccch-------------h-----------------HHHHHh---cCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 0000 0 001111 12222222222 2222222223 344568787777
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Q 047275 270 KLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVL 307 (319)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~ 307 (319)
+.+... ........++..+++.++.+++.||.+|+.+
T Consensus 248 g~s~~~-~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l 284 (394)
T PRK10213 248 GFGVDG-LTLVLLSFGIASFVGTSLSSFILKRSVKLAL 284 (394)
T ss_pred CCChhH-HHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Confidence 766544 3344556667788999999999999655443
No 41
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=1.1e-21 Score=178.51 Aligned_cols=251 Identities=14% Similarity=0.093 Sum_probs=163.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.+..+.+.+.+...++..+++++.|+++||+|||++++.+.++..++.++.+++++++.+++.|++.|++.|...+....
T Consensus 27 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 106 (379)
T TIGR00881 27 LSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGR 106 (379)
T ss_pred CCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHH-HHHhcccccCChhhHHhccC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASI-LTLGALILPDTPNSIIQRSN 189 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es~~~~~~~~~ 189 (319)
++.|++|+++|++..+....+..+|...+. +...... +.++||+.|.+.++..++ ..+...+.||+|+....+..
T Consensus 107 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (379)
T TIGR00881 107 TVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIA---ELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPA 183 (379)
T ss_pred HHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHH---hcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCcc
Confidence 999999999999988777777777766555 3333222 236899998876655444 33445567777643211110
Q ss_pred ChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH-h
Q 047275 190 GHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR-T 268 (319)
Q Consensus 190 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 268 (319)
++++.+ +.++.+ + +.++..+..+...+.+++. +..+ ......+......+....+.|.+++ .
T Consensus 184 ~~~~~~-------~~~~~~----~--~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (379)
T TIGR00881 184 EEMPNE-------EPDGDA----E--KKEEELTKKQIFLQYVLLN---KVLW-YISLGYVFVYVVRTGILDWSPLYLTQE 246 (379)
T ss_pred ccCccc-------cccccc----c--cccccccchHHHHHHHHhc---chHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 000000 0 0000000000111222221 2222 2222222233334455566777765 4
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 047275 269 IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLG 303 (319)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G 303 (319)
.+.+.... ........+..+++.++.+++.||.+
T Consensus 247 ~g~~~~~~-~~~~~~~~~~~~~~~~~~g~l~~r~~ 280 (379)
T TIGR00881 247 KGFSKEKA-SWAFTLYELGGLVGTLLAGWLSDKLF 280 (379)
T ss_pred hCCCHHHH-HHHHHHHHHHcchhHHHHHHHHHHHc
Confidence 56554433 34455666778899999999999864
No 42
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.88 E-value=1e-20 Score=171.24 Aligned_cols=247 Identities=12% Similarity=0.084 Sum_probs=166.4
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhch-----hhhHHHHHHHHHhhhhhhccc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAF-----NVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~-----~~~~li~~R~l~Gig~g~~~~ 107 (319)
++.+.+.+.+...++..+++++.|+++||+|||++++.+.++..++..+..++. +++.+++.|+++|++.+...+
T Consensus 32 s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 111 (365)
T TIGR00900 32 SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTP 111 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 457788899999999999999999999999999999999999988888887777 999999999999999999999
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhccc--ccCChhhHH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALI--LPDTPNSII 185 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~--l~es~~~~~ 185 (319)
...+++.|++|+++|++..+....+..+|.+.+..++.... +.++||+.|.+.++..++..+..+. .||+++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 186 (365)
T TIGR00900 112 AYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY---ATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS-- 186 (365)
T ss_pred HHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc--
Confidence 99999999999999999988888888888776665543322 2368999988776655443333222 2333210
Q ss_pred hccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHH
Q 047275 186 QRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVL 265 (319)
Q Consensus 186 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (319)
++ ++..++. .. +. ++.++.+++.+ .........+............+.|++
T Consensus 187 --~~-~~~~~~~----------~~---~~----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (365)
T TIGR00900 187 --EI-QALSNAV----------LR---DT----------REGIKFVLKNP---LLRTLLLLALLFNLVFAPAIVALFPYV 237 (365)
T ss_pred --cc-cccchhH----------HH---HH----------HhHHHHHHcCc---HHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 00 0000000 00 00 01122222222 222222222222222222223567777
Q ss_pred HHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHH
Q 047275 266 FRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGIL 314 (319)
Q Consensus 266 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~ 314 (319)
.++ .+.+... ........++..+++.++.+++.||.|||++...+..+
T Consensus 238 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 286 (365)
T TIGR00900 238 QSKYLGRGSTH-YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFV 286 (365)
T ss_pred HHHHhCCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHH
Confidence 765 5555443 33455566777889999999999999999887665443
No 43
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3.2e-21 Score=179.61 Aligned_cols=266 Identities=18% Similarity=0.190 Sum_probs=193.6
Q ss_pred cccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchh
Q 047275 30 CKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~ 109 (319)
.+++.++.+...+++.++..+|.++++.+.||++-.+.+....+++.+..+++....|++.+++.|++.|+..++.+|..
T Consensus 76 l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~ 155 (495)
T KOG2533|consen 76 LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGV 155 (495)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHH
Confidence 33567889999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred hHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcccc---CCCcchHHHHHhhHHHHHHHH-HhcccccCChhhHH
Q 047275 110 PLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKI---KGGWGWRISLSMAAAPASILT-LGALILPDTPNSII 185 (319)
Q Consensus 110 ~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~---~~~~gWr~~f~~~~~~~~~~~-~~~~~l~es~~~~~ 185 (319)
..+++.|+.+++||...+++.....+|.+.++++++.+..+ ....||||+|++.++..++.. +..+++|++|....
T Consensus 156 ~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~ 235 (495)
T KOG2533|consen 156 VAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAW 235 (495)
T ss_pred HHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcc
Confidence 99999999999999999999999999999888888774322 233699999999888777654 45778999997321
Q ss_pred hccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHH
Q 047275 186 QRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVL 265 (319)
Q Consensus 186 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (319)
- .+++|.+-..++.... +....+.+.+..++.+..+.++++ ...++.++.....+.+.+|+|.+
T Consensus 236 f--l~~~ek~~~~~~~~~~-------------~~~~~~~~~~~~~~~~a~~dp~vw-~~~l~~~~~~lv~~~~~~~lpl~ 299 (495)
T KOG2533|consen 236 F--LTDEEKELVVERLRES-------------PSGGIENKFKWKGFKEALKDPGVW-PFSLCYFFLKLVNYGFSYWLPLY 299 (495)
T ss_pred c--cchHHHHHHHHHHHhc-------------cCCCcccccCHHHHHHHHhchhHH-HHHHHHHHHhhccccHHHHHHHH
Confidence 1 1112211111111110 000000111222222222233333 44555555556667889999999
Q ss_pred HHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh----cCCchHHHHhh
Q 047275 266 FRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDK----LGRKVLFLVGG 312 (319)
Q Consensus 266 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~~~g~ 312 (319)
+++ .+.+..+ ....+.+..+..+++.+++|+++|| ..+|.+.....
T Consensus 300 l~~~~~~s~~~-a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~ 350 (495)
T KOG2533|consen 300 LKSNGGYSELQ-ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFL 350 (495)
T ss_pred HHcCCCcChHH-hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 988 3344433 3356778888999999999999999 55665543333
No 44
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.87 E-value=1.1e-20 Score=174.95 Aligned_cols=148 Identities=14% Similarity=0.176 Sum_probs=121.6
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.+....++..+.++++..++.++.|+++||+|||++++.+.+++.++++++++++|++.++++|+++|++.+...+....
T Consensus 48 ~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~ 127 (413)
T PRK15403 48 ADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYV 127 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567778889999999999999999999999999999999999999999999999999999999999999877777788
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHh-cccccCChh
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLG-ALILPDTPN 182 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~es~~ 182 (319)
++.|++|+++|++..+.......+|...+..++.... +.+|||+.|.+.++..++..+. .+.+||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~---~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 128 TVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM---HFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 8999999999998777777777777666655544332 2368999998877765554433 456788753
No 45
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.87 E-value=8e-21 Score=179.05 Aligned_cols=243 Identities=14% Similarity=0.058 Sum_probs=153.3
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
+++.+.+.+.+..+++..++.++.|+++||+|||+++..+.+...++.++++++++++.+++.|+++|++.+... ....
T Consensus 68 ls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~ 146 (476)
T PLN00028 68 LTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQY 146 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHH
Confidence 345677778888889999999999999999999999999999999999999999999999999999999988754 4566
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHH----HHHHhhccc--cCCCcchHHHHHhhHHHHHHHHHhcccccC-ChhhH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGA----NLLNYGTQK--IKGGWGWRISLSMAAAPASILTLGALILPD-TPNSI 184 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~----~~~~~~~~~--~~~~~gWr~~f~~~~~~~~~~~~~~~~l~e-s~~~~ 184 (319)
+++|++|+++||+..+.......+|..++ ..+...+.. ..+..|||+.|.+.+++.++..+..+++++ .|..
T Consensus 147 ~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~- 225 (476)
T PLN00028 147 WMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDG- 225 (476)
T ss_pred HHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCC-
Confidence 88999999999998777654444443222 222111111 112358999999887776655444444443 3321
Q ss_pred HhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHH
Q 047275 185 IQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPV 264 (319)
Q Consensus 185 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (319)
+ .++.+ ++ +..+ +... .+.+++.+ +.++++... ..++........+..+.|.
T Consensus 226 ----~-~~~~~---~~--~~~~-~~~~-------------~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~p~ 277 (476)
T PLN00028 226 ----N-YRELK---KS--GTMP-KDSF-------------SKVLRYGV---TNYRTWILA-LTYGYSFGVELTMDNIIAE 277 (476)
T ss_pred ----c-hhhHH---hc--Cccc-cccH-------------HHHHHHHH---cCchhHHHH-HHHHHHHHHHHHHHhHHHH
Confidence 0 00000 00 0000 0000 00111111 122222222 2222222222334456666
Q ss_pred HHH-hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 047275 265 LFR-TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRK 305 (319)
Q Consensus 265 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 305 (319)
++. +.+.+.... .....+.++...++.+++|+++||+|||
T Consensus 278 ~l~~~~g~s~~~a-~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 278 YFYDRFGLSLETA-GAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHhcCCCHHHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 654 456665443 3556677788899999999999999876
No 46
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=4.4e-21 Score=178.21 Aligned_cols=253 Identities=17% Similarity=0.245 Sum_probs=189.5
Q ss_pred ccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--hhhhHHHHHHHHHhhhhhhcc
Q 047275 29 YCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--FNVYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--~~~~~li~~R~l~Gig~g~~~ 106 (319)
....++++++.+.++++.|.+++.+..|++.||+|-|+++.++.++.++++++...+ .+++.+++.|++||++.|...
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 345678899999999999999999999999999999999999999999999998766 455688999999999999999
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHHHHHh-cccccCChhhH
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASILTLG-ALILPDTPNSI 184 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~es~~~~ 184 (319)
+....+.+.|+|++||+++.++...+..+|.+... +.+++.+. .+||+.+|++.+..+++..+. .++..|+|...
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s---~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES---SLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc---CCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 99999999999999999998888888888876655 44444432 379999999988877765444 45567777642
Q ss_pred HhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHH
Q 047275 185 IQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPV 264 (319)
Q Consensus 185 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (319)
... .++|.+ .+++-.+ .+..+++.+.|++.+++ .+.++...++.+....+.+.+..|.|.
T Consensus 224 ~~i--s~~El~-~I~~~k~-------------~~~~~~~~~vP~~~i~t----s~~vwai~~~~f~~~~~~~~l~~y~Pt 283 (466)
T KOG2532|consen 224 PNI--SEKELK-YIEKGKS-------------EAHVKKKPPVPYKAILT----SPPVWAIWISAFGGNWGFYLLLTYLPT 283 (466)
T ss_pred CCC--CHHHHH-HHHhccc-------------ccccCCCCCCCHHHHHc----CHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 111 111111 1111100 00011113557777763 334566777777788888888899999
Q ss_pred HHHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 047275 265 LFRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRK 305 (319)
Q Consensus 265 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 305 (319)
++++ .+++..+ .++.+.+..+...+..+++|.++||.-+|
T Consensus 284 Y~~~VL~f~v~~-~G~~salP~l~~~~~k~~~g~lsD~l~~~ 324 (466)
T KOG2532|consen 284 YLKEVLGFDVRE-TGFLSALPFLAMAIVKFVAGQLSDRLTFR 324 (466)
T ss_pred HHHHHhCCChhh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9875 4555544 44566677788889999999999998664
No 47
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=2.8e-20 Score=171.03 Aligned_cols=242 Identities=20% Similarity=0.220 Sum_probs=163.8
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+..+.++..+...++..++.++.|+++||+|||+.++.+.+.+.++..+...+++++.+++.|+++|++.+...+....+
T Consensus 36 s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 115 (392)
T PRK10473 36 SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAI 115 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 45677788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH-HhcccccCChhhHHhccCCh
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT-LGALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~es~~~~~~~~~~~ 191 (319)
+.|++|+++|++..+.......+|...+..++.... +..+||+.|.+.++..++.. +..+.+||+++.. ++
T Consensus 116 i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~---~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~-- 187 (392)
T PRK10473 116 LRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM---LKFPWQSLFYTMAAMGILVLLLSLFILKETRPAR---AP-- 187 (392)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcc---cC--
Confidence 999999999999887777776666555555443322 23689999887766554433 3345567764211 00
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHH-HhcC
Q 047275 192 EKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLF-RTIK 270 (319)
Q Consensus 192 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 270 (319)
++. ...++. ++.++ +++.+.......+. .........+.|+++ ++.+
T Consensus 188 ~~~-----------~~~~~~-----------------~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g 235 (392)
T PRK10473 188 AAS-----------SKPREN-----------------SESLL---NRFFLSRLVITTLS-VTVILTFVNTSPVLLMEQMG 235 (392)
T ss_pred Ccc-----------chHHHH-----------------HHHHh---CHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHcC
Confidence 000 000000 00111 11111111111111 111223334456555 4456
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
.+... ........+...+++.++.+++.||+|||+..+.+..+.
T Consensus 236 ~~~~~-~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~ 279 (392)
T PRK10473 236 FSRGE-YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLF 279 (392)
T ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 65443 334455667778899999999999999999877666544
No 48
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.87 E-value=1.9e-20 Score=175.42 Aligned_cols=252 Identities=16% Similarity=0.078 Sum_probs=163.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc----hhhhHHHHHHHHHhhhhhhccc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA----FNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a----~~~~~li~~R~l~Gig~g~~~~ 107 (319)
.++++.+...++..++..+++++.|+++||+|||++++.+.+++.++.++.+++ .+++.+++.|+++|++.|...+
T Consensus 60 ~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~ 139 (452)
T PRK11273 60 FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWP 139 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccch
Confidence 456888899999999999999999999999999999999999999998887765 3788899999999999999988
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHH-HHHHHHHhhccccCCCcchHHHHHhhHHHHHH-HHHhcccccCChhhHH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGV-LGANLLNYGTQKIKGGWGWRISLSMAAAPASI-LTLGALILPDTPNSII 185 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es~~~~~ 185 (319)
.....+.|++|+++|++..+....+..+|. +.+.+....... ..+||+.|++.+++.++ ..+..+++||+|+...
T Consensus 140 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~---~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~ 216 (452)
T PRK11273 140 PCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW---FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCG 216 (452)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcC
Confidence 888889999999999998888877777763 334333221111 13799999887665554 3445667788876421
Q ss_pred hccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcc-c-chhHHHHHHHHHHHHhhhhhhHhHhhhH
Q 047275 186 QRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQR-K-YRPQLVMAILIPFFQQLTGINVISFYAP 263 (319)
Q Consensus 186 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (319)
.+ + +++.++ +..+ +. ...++.+.+.++.+.. . +.+..+ ......+......+....|.|
T Consensus 217 ~~-~-~~~~~~---~~~~------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~P 277 (452)
T PRK11273 217 LP-P-IEEYKN---DYPD------DY-------NEKHEQELTAKQIFMQYVLPNKLLW-YIAIANVFVYLLRYGILDWSP 277 (452)
T ss_pred CC-C-hhhhhh---cccc------cc-------ccccCCCccHHHHHHHHHHcChHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 11 0 111100 0000 00 0000011122222211 1 122222 232332222233455667888
Q ss_pred HHHHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCch
Q 047275 264 VLFRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKL--GRKV 306 (319)
Q Consensus 264 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~ 306 (319)
.++++ .+.+..... ....+.....+++.+++|+++||+ |||.
T Consensus 278 ~~l~~~~g~s~~~~~-~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 278 TYLKEVKHFALDKSS-WAYFLYEYAGIPGTLLCGWMSDKVFRGNRG 322 (452)
T ss_pred HHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 88876 456544433 334456677788999999999999 5554
No 49
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.86 E-value=6.9e-20 Score=169.30 Aligned_cols=245 Identities=16% Similarity=0.146 Sum_probs=159.3
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+...+.+.++..++.++.|+++||+|||++++.+.....++.++...+++++.+++.|+++|++.+...+....
T Consensus 45 ~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~ 124 (406)
T PRK15402 45 AGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYA 124 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHH
Confidence 34577788888999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hcccccCChhhHHhccCC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GALILPDTPNSIIQRSNG 190 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~es~~~~~~~~~~ 190 (319)
++.|.+|+++|++..+.......+|...+..+..... +..+||+.|.+.++..++..+ .....||+++.. ++
T Consensus 125 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~---~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~- 197 (406)
T PRK15402 125 AIQESFEEADAIKITALMANVALLAPLLGPLVGAALI---HVLPWRGMFVLFAALAALSFFGLWRAMPETAGRV---GE- 197 (406)
T ss_pred HHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccCccHHHHHHHHHHHHHHHHHHHhCCCCCccc---cc-
Confidence 9999999999887666655555555444443332221 235899998876666554333 334567764321 00
Q ss_pred hHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHH-Hhc
Q 047275 191 HEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLF-RTI 269 (319)
Q Consensus 191 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 269 (319)
+++. .+. .+.++.+++. ++.+.......+.. ........+.|.++ +..
T Consensus 198 ~~~~--------------~~~-------------~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~ 246 (406)
T PRK15402 198 KLSL--------------KEL-------------GRDYKLVLKN---RRFVAGALALGLVS-LPLLAWIALSPVILISGE 246 (406)
T ss_pred cccH--------------HHH-------------HHHHHHHHcC---cHHHHHHHHHHHHH-HHHHHHHHHhHHHHHHHh
Confidence 0000 000 0011122211 22222222211111 11223334556665 445
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 270 KLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
+.+..+ ............+++.++.+++.||+|+|+....+..++
T Consensus 247 g~~~~~-~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~ 291 (406)
T PRK15402 247 QLSSYE-YGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPM 291 (406)
T ss_pred CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 555433 223333444567788999999999999998876665443
No 50
>PRK10504 putative transporter; Provisional
Probab=99.86 E-value=6.7e-20 Score=172.59 Aligned_cols=274 Identities=13% Similarity=0.116 Sum_probs=170.3
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
++.+.++..+.+.++..++.++.|+++||+|||++++.+..++.++.++++++++++.++++|+++|++.|+..+....+
T Consensus 43 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~ 122 (471)
T PRK10504 43 SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLT 122 (471)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 45677788888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHh-cccccCChhhHHhccCCh
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLG-ALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~es~~~~~~~~~~~ 191 (319)
+.|++|+++|+...+.......+|...+..+...+ .+.++||+.|.+......+..+. ....|+.+.. .++.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l---~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~r~~~ 197 (471)
T PRK10504 123 VMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL---VEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQ--TRRFDL 197 (471)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH---HhhccHHHHHHHHHHHHHHHHHHHHHhCCCcccc--CCCCCh
Confidence 99999999999887777777777765554443222 12468999998866554443333 3344544321 011111
Q ss_pred HHHHHHHH-------HHcCChh---HHHHHHH--------HHHHHhhccccccchh--hhhcccchhHHHHHHHHHHHHh
Q 047275 192 EKAKKMLQ-------RVRGTAD---VQAELDD--------LIRASIVSRTVKHPFQ--TIIQRKYRPQLVMAILIPFFQQ 251 (319)
Q Consensus 192 ~~a~~~~~-------~~~~~~~---~~~~~~~--------~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~ 251 (319)
........ -..+... ....... .......+++.+++.. ++++ +++........++ .
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~l~~~~~-~ 273 (471)
T PRK10504 198 SGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFR---TRTFSLGLAGSFA-G 273 (471)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhc---ccchHHHHHHHHH-H
Confidence 11100000 0000000 0000000 0000000111112211 1222 2233333333333 2
Q ss_pred hhhhhHhHhhhHHHHHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 252 LTGINVISFYAPVLFRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 252 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
........++.|++++. .+.+.. ...+......+...++.++.+++.||+|||+++..+..++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~ 338 (471)
T PRK10504 274 RIGSGMLPFMTPVFLQIGLGFSPF-HAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLA 338 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 33345556778888875 555443 33344555666667777889999999999998876665443
No 51
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=1e-19 Score=169.72 Aligned_cols=112 Identities=17% Similarity=0.239 Sum_probs=97.0
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHh---hhchhhhHHHHHHHHHhhhhhhccch
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALG---GAAFNVYMLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~---~~a~~~~~li~~R~l~Gig~g~~~~~ 108 (319)
.++.+.+...+.++++..+++++.|++.||+|||+++..+.+++.++.+++ ..+++++.++++|+++|+|.|...+.
T Consensus 58 ~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~ 137 (438)
T PRK10133 58 LTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETA 137 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 456888899999999999999999999999999999999999999999875 56899999999999999999999999
Q ss_pred hhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 047275 109 VPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL 143 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 143 (319)
...++.|+.|+++|+...+..+..+.+|...+.+.
T Consensus 138 ~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 138 ANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998777777655666677777776555544
No 52
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.85 E-value=8.6e-20 Score=168.74 Aligned_cols=241 Identities=17% Similarity=0.083 Sum_probs=162.6
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc-----hhhhHHHHHHHHHhhhhhhcc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA-----FNVYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a-----~~~~~li~~R~l~Gig~g~~~ 106 (319)
+++.+.+++.+...+++.++.++.|++.||+|.|+++..+.++..+..+..+++ ++++.+++.|++.|++ |+..
T Consensus 67 ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f 145 (462)
T PRK15034 67 FTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANF 145 (462)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhH
Confidence 567889999999999999999999999999999999999999999999998876 8999999999999998 7788
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHHHHHH----HHHHH-HHh-hccc---------cCCCcchHHHHHhhHHHHHHHH
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCTAIGV----LGANL-LNY-GTQK---------IKGGWGWRISLSMAAAPASILT 171 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~----~~~~~-~~~-~~~~---------~~~~~gWr~~f~~~~~~~~~~~ 171 (319)
+.....+++|+|+++||++.++......+|. ++... +.. ..+. ..+..+||....+..++.++..
T Consensus 146 ~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~ 225 (462)
T PRK15034 146 ASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIAT 225 (462)
T ss_pred HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998877743333442 22221 111 0010 1123568887766665554444
Q ss_pred Hh-cccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHH
Q 047275 172 LG-ALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQ 250 (319)
Q Consensus 172 ~~-~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 250 (319)
+. ++..+|.|. ++.+. ++...-.++++++ .+...+++
T Consensus 226 i~~~~~~~~~~~----~~~~~-------------------------------------~~~~~vlk~~~~W-llslly~~ 263 (462)
T PRK15034 226 IAAWSGMNDIAS----SRASI-------------------------------------ADQLPVLQRLHLW-LLSLLYLA 263 (462)
T ss_pred HHHHHhCCCccc----cccCH-------------------------------------HHHHHHhCCCchh-HHHHHHHH
Confidence 33 333444321 00000 0000011123333 34444566
Q ss_pred hhhhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhh
Q 047275 251 QLTGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFV 317 (319)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~ 317 (319)
.+.++...+++.|++.++.- + .........+..+...+..+++|+++||+|+|+.++++.+.+.+
T Consensus 264 tFG~fvg~s~~lp~~~~~~~-~-~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i 328 (462)
T PRK15034 264 TFGSFIGFSAGFAMLAKTQF-P-DVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAI 328 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHc-C-hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHH
Confidence 67777778888988876522 2 12222223344566778888999999999999988777765443
No 53
>PRK11043 putative transporter; Provisional
Probab=99.85 E-value=1.3e-19 Score=167.20 Aligned_cols=234 Identities=15% Similarity=0.113 Sum_probs=155.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+...+...++..+++++.|+++||+|||+.+..+..+..++.+++.++++++.+++.|+++|++.+...+....
T Consensus 38 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~ 117 (401)
T PRK11043 38 TSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQA 117 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCCh
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~ 191 (319)
++.|++|+++|+...+.......+|...+..+.... .+.++||+.|.+.++..++..+..++++|+++. ++ +
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~ 189 (401)
T PRK11043 118 LVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWL---LNHFGWQAIFATLFAITLLLILPTLRLKPSKKA----RK-Q 189 (401)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc----cc-c
Confidence 999999998887665555444445444443332221 123689999987776665554444455555421 00 0
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcCC
Q 047275 192 EKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIKL 271 (319)
Q Consensus 192 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (319)
++.+ ..++++++. ++.......... .......+..+.|.++++.+.
T Consensus 190 ~~~~------------------------------~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~g~ 235 (401)
T PRK11043 190 SQDA------------------------------LTFKQLLKS---KTYLGNVLIFAA-CSAAFFAWLTGSPFILEQMGY 235 (401)
T ss_pred chHH------------------------------HHHHHHHcC---hhHHHHHHHHHH-HHHHHHHHHHHhHHHHHHcCC
Confidence 0000 001111111 111111111111 112233444567777777666
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Q 047275 272 SESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLF 308 (319)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~ 308 (319)
+... .............++.+..+++.||+|+|+..
T Consensus 236 s~~~-~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~ 271 (401)
T PRK11043 236 SPAD-IGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL 271 (401)
T ss_pred CHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 5443 33444455566778888999999999998754
No 54
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.85 E-value=4.3e-20 Score=172.44 Aligned_cols=253 Identities=15% Similarity=0.064 Sum_probs=162.7
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc----hhhhHHHHHHHHHhhhhhhccc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA----FNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a----~~~~~li~~R~l~Gig~g~~~~ 107 (319)
+++++.++..+...++..+++++.|+++||+|||+.+..+.++..++.++.+.. .+++.+.+.|++.|++.|...+
T Consensus 58 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~ 137 (438)
T TIGR00712 58 FSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWP 137 (438)
T ss_pred CCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchH
Confidence 456788899999999999999999999999999999999999999988876654 5677889999999999999999
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHHH-HHhcccccCChhhHH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASIL-TLGALILPDTPNSII 185 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~~~~l~es~~~~~ 185 (319)
....++.|++|+++||+..+....+..+|...+. +...... ...+||..|.+.++..++. .+..+++||+|+...
T Consensus 138 ~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~---~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~ 214 (438)
T TIGR00712 138 PCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA---WFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCG 214 (438)
T ss_pred HHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcC
Confidence 8999999999999999998888877777654433 3333222 1258999998877765553 344566788775421
Q ss_pred hccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHH
Q 047275 186 QRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVL 265 (319)
Q Consensus 186 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (319)
.+ + .++.+. +..+ +..++ ++.+.+.++.+.+.. .+.+..+..... .+......+....|.|.+
T Consensus 215 ~~-~-~~~~~~---~~~~--~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~ 277 (438)
T TIGR00712 215 LP-P-IEEYRN---DYPD--DYNEK-------AEQELTAKEIFMQYV--LPNKLLWYIAIA-NVFVYLLRYGVLDWSPTY 277 (438)
T ss_pred CC-C-chhccc---cccc--ccccc-------cccccchHHHHHHHH--ccCchHHHHHHH-HHHHHHHHHHHHHhHHHH
Confidence 00 0 000000 0000 00000 000000001111111 111222222222 222223345566788888
Q ss_pred HHhc-CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 047275 266 FRTI-KLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRK 305 (319)
Q Consensus 266 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 305 (319)
+++. +.+.... .....+.++..+++.++.+++.||++++
T Consensus 278 l~~~~g~s~~~~-~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 278 LKEVKHFALDKS-SWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHccCCChhhH-HHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 7764 5554433 3445566777889999999999999654
No 55
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.85 E-value=1.2e-20 Score=182.62 Aligned_cols=263 Identities=14% Similarity=0.176 Sum_probs=166.4
Q ss_pred cccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhch-----------------------
Q 047275 30 CKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAF----------------------- 86 (319)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~----------------------- 86 (319)
+++++.+.+++.+++.++.+++.++.++++||+|||+.+.++.+++++++++.++.+
T Consensus 63 F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~ 142 (633)
T TIGR00805 63 FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANS 142 (633)
T ss_pred hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccccc
Confidence 335678899999999999999999999999999999999999999999999887653
Q ss_pred ----------------------------hhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHH
Q 047275 87 ----------------------------NVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVL 138 (319)
Q Consensus 87 ----------------------------~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~ 138 (319)
.+..++++|+++|+|.++..+....++.|++|+++|+++.++...+..+|..
T Consensus 143 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~ 222 (633)
T TIGR00805 143 FLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPA 222 (633)
T ss_pred ccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhH
Confidence 2567889999999999999999999999999999999998888888888876
Q ss_pred HHHHHHhhcccc-----------------CCCc--chHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHHHHHHHH
Q 047275 139 GANLLNYGTQKI-----------------KGGW--GWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEKAKKMLQ 199 (319)
Q Consensus 139 ~~~~~~~~~~~~-----------------~~~~--gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~a~~~~~ 199 (319)
++.+++..+... ++.| .||..|++.++..++..+..+++|++.+....+.+ .+.++..+
T Consensus 223 lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~--~~~~~~~~ 300 (633)
T TIGR00805 223 FGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVN--VDVHETEK 300 (633)
T ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccc--hhhhhhhc
Confidence 665544322111 0112 37888888777666655545566665321100000 00000000
Q ss_pred HHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH-hcCCCchhhHH
Q 047275 200 RVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR-TIKLSESTSLL 278 (319)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 278 (319)
...+..+...+... ..++..+.++.+++ ++ ..+......+......+.+..|+|.+++ +.+.+.....
T Consensus 301 ~~~~~~~~~~~~~~------~~~~~~~~~~~Ll~---n~-~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag- 369 (633)
T TIGR00805 301 LEKSEDKSRKKNSD------ITKDFPKIIKRLLC---NP-IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEAN- 369 (633)
T ss_pred ccccccccchhhhh------hHHHHHHHHHHHHc---Cc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH-
Confidence 00000000000000 00000112223332 22 3333434444444556677778888876 4666654433
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHhcCCc
Q 047275 279 MSAVVTGG-VSTIATITSMILTDKLGRK 305 (319)
Q Consensus 279 ~~~~~~~~-~~~~~~~~~g~l~dr~Grr 305 (319)
+...+..+ ..+++.+++|+++||++++
T Consensus 370 ~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 370 FLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 32222232 4568999999999999864
No 56
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.85 E-value=8e-20 Score=162.35 Aligned_cols=259 Identities=15% Similarity=0.096 Sum_probs=184.2
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
++..+.+.+.+.+.+...++-++.|.++||.+.|..+-.++++..+.+++.+++++.+.+.+.=++.|..=|+-.|+...
T Consensus 61 lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~ 140 (448)
T COG2271 61 LSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCAR 140 (448)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHH-HHHHHhhccccCCCcchHHHHHhhHHHHHHHHHh-cccccCChhhHHhccC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLG-ANLLNYGTQKIKGGWGWRISLSMAAAPASILTLG-ALILPDTPNSIIQRSN 189 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~es~~~~~~~~~ 189 (319)
.+..|+|+++||++.++++.+..+|..+ +.+... .....+.+||..|++.++.++++.+. .+..+|+|+..-..
T Consensus 141 ~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l--a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP-- 216 (448)
T COG2271 141 TITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL--AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP-- 216 (448)
T ss_pred HHHHHcCccccCceEEEehhhhhcccchHHHHHHH--HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC--
Confidence 9999999999999988888888887433 333311 11223468999999999887775554 55678888643211
Q ss_pred ChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhccc-chhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHh
Q 047275 190 GHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRK-YRPQLVMAILIPFFQQLTGINVISFYAPVLFRT 268 (319)
Q Consensus 190 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (319)
..++ ..++.. +.+ .++++...-+.++++.+. .+++.++.+.++.......=+.+.-|.|.++.+
T Consensus 217 ---~ie~----~~~d~~------e~~--~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e 281 (448)
T COG2271 217 ---PIEE----YRGDPL------EIY--EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSE 281 (448)
T ss_pred ---CHHH----hhcCch------hhh--hhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 1111 111000 000 000001112334443322 234455555555554444446677899999866
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCchHHH
Q 047275 269 IKLSESTSLLMSAVVTGGVSTIATITSMILTDKL--GRKVLFL 309 (319)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~~ 309 (319)
.+.-+.........+.=...++|++++|+++||. |||.++.
T Consensus 282 ~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~ 324 (448)
T COG2271 282 VKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMA 324 (448)
T ss_pred hcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHH
Confidence 5544433333444455577889999999999995 7886653
No 57
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.84 E-value=3e-19 Score=162.05 Aligned_cols=251 Identities=16% Similarity=0.170 Sum_probs=163.9
Q ss_pred hhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHH
Q 047275 14 PEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLIL 93 (319)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~ 93 (319)
++..+.+.+|.+ .++.+.++..+..+++..+++++.|++.||+|||+++..+.++..++...+ .+++.+.+++
T Consensus 20 ~~~lp~l~~~~~------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (355)
T TIGR00896 20 GPLLPQIRSALG------MSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFA 92 (355)
T ss_pred cccHHHHHHHhC------CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHH
Confidence 455556655554 456888999999999999999999999999999999999999888888777 7889999999
Q ss_pred HHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHh
Q 047275 94 GRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLG 173 (319)
Q Consensus 94 ~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~ 173 (319)
.|++.|++.+...+....++.|++| ++|++..+....+..+|..++..+........ ..+||+.|...++..++..
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~-~~~w~~~f~~~~~~~~~~~-- 168 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS-GGHWQQALAWWALPALLAL-- 168 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHH--
Confidence 9999999999988888888999886 68998888888777777655544332221111 1249998876554433322
Q ss_pred cccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhh
Q 047275 174 ALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLT 253 (319)
Q Consensus 174 ~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 253 (319)
..++||.++. + +++ . . ..+.+.++.++. ++.+. ..........
T Consensus 169 ~~~~~~~~~~-----~-~~~---------~-~-----------------~~~~~~~~~~~~---~~~~~-~~~~~~~~~~ 211 (355)
T TIGR00896 169 LAWIPQVRRR-----V-AAN---------Q-T-----------------TTRLTPVRIWRS---PLAWQ-VTVFFGLQSG 211 (355)
T ss_pred HHHhhhhccc-----c-CCC---------C-C-----------------CCCCCCchhhcC---HhHHH-HHHHHHHHHH
Confidence 2234443210 0 000 0 0 000111222221 22222 2222222223
Q ss_pred hhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHhhH
Q 047275 254 GINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLG-RKVLFLVGGI 313 (319)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-rr~~~~~g~~ 313 (319)
.++....|.|.++++.+.+... ........++..+++.+..+++.||++ ||+...++..
T Consensus 212 ~~~~~~~~lp~~~~~~g~~~~~-~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~ 271 (355)
T TIGR00896 212 LYYSLIGWLPAILISHGASAAT-AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAV 271 (355)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHH
Confidence 3445556788888776665443 334555667788899999999999994 5555444433
No 58
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.84 E-value=6.2e-19 Score=162.48 Aligned_cols=135 Identities=20% Similarity=0.158 Sum_probs=108.5
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--------hhhhHHHHHHHHHhhhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--------FNVYMLILGRVLLGVGIG 103 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--------~~~~~li~~R~l~Gig~g 103 (319)
.+..+.+++.+..+++..+++++.|+++||+|||++++.+.+...+++..+.++ .+++.+++.|+++|++.+
T Consensus 48 ~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 127 (399)
T PRK05122 48 FSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGES 127 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHH
Confidence 346788899999999999999999999999999999999999888877665443 257789999999999999
Q ss_pred hccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH
Q 047275 104 FSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 104 ~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~ 169 (319)
...+....++.|+.|+++|++..+....+..+|...+..++..+- +.+|||..+.+..+..++
T Consensus 128 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~---~~~g~~~~~~~~~~~~~~ 190 (399)
T PRK05122 128 LAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY---HWGGLAGLGLLIMLLALL 190 (399)
T ss_pred hhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH---HcccHHHHHHHHHHHHHH
Confidence 999999999999999999999887777777777655544432221 236899988765555443
No 59
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.83 E-value=4.4e-19 Score=163.31 Aligned_cols=240 Identities=13% Similarity=0.046 Sum_probs=156.8
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
....+++.+.++++..++.++.|+++||+|||++++++.+++.+++++++++.+. ++.|+++|++.+...|...+++
T Consensus 37 ~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i 113 (393)
T PRK11195 37 DWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGIL 113 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888899999999999999999999999999999999999998887776664 7899999999999999999999
Q ss_pred HhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHH
Q 047275 114 SEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEK 193 (319)
Q Consensus 114 ~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~ 193 (319)
.|++|+++|+++++..+....+|.+.+..++..+.. +.|+..+.+.....++..+....+||++++...++. +
T Consensus 114 ~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~----~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~---~ 186 (393)
T PRK11195 114 TELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD----PHAEAALAVCALIYLLAALFNLFIPRLGARRPGQSW---N 186 (393)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCC---C
Confidence 999999999999888888887776666555433221 247777766554433444445678887643111100 0
Q ss_pred HHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHh-cCCC
Q 047275 194 AKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRT-IKLS 272 (319)
Q Consensus 194 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 272 (319)
.....+ +.. +..+.+++.+..+....... +.... .....+..|.++++ .+.+
T Consensus 187 ~~~~~~-------------~~~----------~~~~~l~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~lg~s 239 (393)
T PRK11195 187 PIALLR-------------DFF----------HACRVLWRDKLGRFSLAGTT---LFWGA-GATLRFLVLAWAPVALGIT 239 (393)
T ss_pred HHHHHH-------------HHH----------HHHHHHHhCchhHHHHHHHH---HHHHH-HHHHHHHHHHHHHHHcCCC
Confidence 000000 000 00122232222222221111 11111 12223344444443 4544
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHh
Q 047275 273 ESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVG 311 (319)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g 311 (319)
.. ..+......++..+++++..+++.||.++|+....+
T Consensus 240 ~~-~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g 277 (393)
T PRK11195 240 LN-QPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAG 277 (393)
T ss_pred hh-HHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHH
Confidence 43 344566677778889999999999999988766554
No 60
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=5.9e-19 Score=163.23 Aligned_cols=154 Identities=15% Similarity=0.126 Sum_probs=119.9
Q ss_pred hhhhhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh---chh
Q 047275 11 KFFPEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA---AFN 87 (319)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~---a~~ 87 (319)
.+.++..+.++++.+ .+..+.+.+.+..+++..+++++.|++.||+|||+++..+.+++.++.++... .++
T Consensus 20 ~~~~~l~~~~~~~~~------~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~ 93 (410)
T TIGR00885 20 DITNPMVPQFQQAFT------LTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMN 93 (410)
T ss_pred HhHHHHHHHHHHHhC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 344455555555554 34678889999999999999999999999999999999999999999887533 468
Q ss_pred hhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHh-hcccc----------------
Q 047275 88 VYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNY-GTQKI---------------- 150 (319)
Q Consensus 88 ~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~-~~~~~---------------- 150 (319)
++.+++.|++.|+|.|...+....++.|..|+++|++..+..+....+|...+..+.. .....
T Consensus 94 ~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~ 173 (410)
T TIGR00885 94 YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEE 173 (410)
T ss_pred HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHH
Confidence 9999999999999999999999999999999999998877777777777655544432 21110
Q ss_pred ------CCCcchHHHHHhhHHHHHHH
Q 047275 151 ------KGGWGWRISLSMAAAPASIL 170 (319)
Q Consensus 151 ------~~~~gWr~~f~~~~~~~~~~ 170 (319)
.+..+||++|.+.++..++.
T Consensus 174 ~~~~~~~~~~~w~~~fl~~a~~~~~~ 199 (410)
T TIGR00885 174 LSAIKHSDLASVQTPYMIIGAVVLAV 199 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01247999998776655443
No 61
>PRK12382 putative transporter; Provisional
Probab=99.83 E-value=9.2e-19 Score=161.00 Aligned_cols=234 Identities=15% Similarity=0.199 Sum_probs=150.3
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHH---hh-----hchhhhHHHHHHHHHhhhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSAL---GG-----AAFNVYMLILGRVLLGVGIG 103 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~---~~-----~a~~~~~li~~R~l~Gig~g 103 (319)
.+..+.+...+..+++..+++++.|+++||+|||++++.+.+...++.+. ++ ...+++.++++|+++|++.+
T Consensus 48 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 127 (392)
T PRK12382 48 FGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGES 127 (392)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999988877765442 22 13688999999999999999
Q ss_pred hccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhh
Q 047275 104 FSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNS 183 (319)
Q Consensus 104 ~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~ 183 (319)
...+....++.|+.|+++|++..+..+.+...|...+..++..+. +.+|||+.+.+..+..++........||+++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (392)
T PRK12382 128 QLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH---SHFGFAALALTTMVLPLLAWAFNGTVRKVPAH 204 (392)
T ss_pred HHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH---hccChHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999888899999999999999888888777777666555443221 23689987765544333322222223333210
Q ss_pred HHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhH
Q 047275 184 IIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAP 263 (319)
Q Consensus 184 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (319)
+++++ + .++..+...++. .... ........+..+.|
T Consensus 205 ----~~~~~-------------~---------------------~~~~~~~~~~~~-~~~~-----l~~~~~~~~~~~~~ 240 (392)
T PRK12382 205 ----AGERP-------------S---------------------LWSVVGLIWKPG-LGLA-----LQGVGFAVIGTFVS 240 (392)
T ss_pred ----cccCc-------------h---------------------HHHHHHHHHHhH-HHHH-----HHHHHHhHHHHHHH
Confidence 00000 0 000000000111 1111 11122333445566
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 264 VLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
.++++.+.+.. .......+...+++.+..+++.||+|||+....+..+.
T Consensus 241 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~ 289 (392)
T PRK12382 241 LYFASKGWAMA---GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVE 289 (392)
T ss_pred HHHHhcCCchh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHH
Confidence 66666554321 22333455566788899999999999998776655443
No 62
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.83 E-value=8.1e-19 Score=159.97 Aligned_cols=238 Identities=14% Similarity=0.160 Sum_probs=148.6
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHH-HHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILV-GGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~-~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
++.+.+.+.+...++..+.+++.|+++||+|||+.++. +.....++..+++++++++.+++.|+++|.+.+...+....
T Consensus 31 s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~ 110 (375)
T TIGR00899 31 RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFA 110 (375)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 46778888888888889999999999999999887654 55556667778889999999999999999988888888888
Q ss_pred HHHhcCCCCCCcch--hhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hcccccCChhhHHhcc
Q 047275 112 YLSEMAPPKHRGAF--NIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GALILPDTPNSIIQRS 188 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~es~~~~~~~~ 188 (319)
++.|+.|+++|+.. .+....+..+|...+..+.... .+.++||+.|.+.+++.++..+ ..+++||+|+...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l---~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--- 184 (375)
T TIGR00899 111 LAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWL---ALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAP--- 184 (375)
T ss_pred HHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHH---HHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcc---
Confidence 89999888877642 3444444555655444333222 1236899999988776555443 3455788764210
Q ss_pred CChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHH-H
Q 047275 189 NGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLF-R 267 (319)
Q Consensus 189 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 267 (319)
+ +++ .. +.++.+++++.+... ...+.. .........+.|.++ +
T Consensus 185 ~-~~~----------~~---------------------~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~ 228 (375)
T TIGR00899 185 G-ALT----------RL---------------------EVRGLLASRDTRLLF---VACTLM-WGCNILYIINMPLLIIH 228 (375)
T ss_pred c-ccC----------cc---------------------hhhhhhcCcchHHHH---HHHHHH-HHHHHHHHhhhHHHHHH
Confidence 0 000 00 000111111111111 111111 111222334455554 4
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 268 TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
+.+.+..... ...........++.++.+++.||+|||+.+..+..
T Consensus 229 ~~g~~~~~~g-~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~ 273 (375)
T TIGR00899 229 ELGLPDKLAG-LMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAAL 273 (375)
T ss_pred HcCCCHHHHH-HHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHH
Confidence 5565544332 33334445567788899999999999987665543
No 63
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.83 E-value=1.2e-18 Score=158.03 Aligned_cols=249 Identities=14% Similarity=0.099 Sum_probs=153.3
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhh-----chhHHH-HHHHHHHHHHHHHhhhc---hhhhHHHHHHHHHhhhhh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRAL-----GRKASI-LVGGVAFLAGSALGGAA---FNVYMLILGRVLLGVGIG 103 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~-----GRr~~~-~~~~~~~~~~~~~~~~a---~~~~~li~~R~l~Gig~g 103 (319)
+.++.+.+... .+...+ .+++|++.||+ ||||.+ +.+.+...+...+.++. .+.+.+....++.|++.+
T Consensus 21 s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~ 98 (356)
T TIGR00901 21 SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSA 98 (356)
T ss_pred CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHH
Confidence 34566666433 333333 88999999998 899974 56677777766666666 466678888889999999
Q ss_pred hccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccC-----CCcchHHHHHhhHHHHHHHHHhcc-cc
Q 047275 104 FSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIK-----GGWGWRISLSMAAAPASILTLGAL-IL 177 (319)
Q Consensus 104 ~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~-----~~~gWr~~f~~~~~~~~~~~~~~~-~l 177 (319)
...++..+++.|++|+++|++.++....+..+|.+.+..+........ ..|+||..|.+.++..++..+..+ ..
T Consensus 99 ~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~ 178 (356)
T TIGR00901 99 TQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLA 178 (356)
T ss_pred HHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999998888888888776655443222111 135599999888876655444433 34
Q ss_pred cCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhH
Q 047275 178 PDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINV 257 (319)
Q Consensus 178 ~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (319)
||+++. .+++++. +.+. +++++++++++..++........++.. ...+.
T Consensus 179 ~e~~~~----~~~~~~~-------------~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 227 (356)
T TIGR00901 179 KEPQED----ASVPKPL-------------TQAV-------------LKPIREFFQRKNMIQALLLLLLIVLYK-LGDSA 227 (356)
T ss_pred cCCCcc----cccchhH-------------HHHH-------------HHHHHHHHHhcCchHHHHHHHHHHHHH-HHHHH
Confidence 664221 0000000 0000 112233333332223333333333333 23344
Q ss_pred hHhhhHHHHHhcCCCchhhHHHHHHHHH-HHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 258 ISFYAPVLFRTIKLSESTSLLMSAVVTG-GVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
...+.|.++++.+.+..+.. ......+ ...+++.++++++.||+|||+.++.+.++.
T Consensus 228 ~~~~~~~~l~~~g~~~~~~g-~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~ 285 (356)
T TIGR00901 228 ATVLTTLFLLDMGFSKEEIA-LVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQ 285 (356)
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 44566666666665554332 3333333 456789999999999999988776665544
No 64
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.83 E-value=9.6e-19 Score=157.20 Aligned_cols=221 Identities=26% Similarity=0.367 Sum_probs=169.0
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+...+...++..+++++.|+++||+|||+.+..+.....++..+..+.++++.+++.|++.|++.+...+....
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 110 (352)
T cd06174 31 LSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAA 110 (352)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHH
Confidence 35677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCCh
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~ 191 (319)
++.|+.|+++|++..+.......+|...+..+..... +..+||+.+.+.++..++..+...+++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 174 (352)
T cd06174 111 LIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLA---ESLGWRWLFLILAILGLLLALLLLFLL------------- 174 (352)
T ss_pred HHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 9999999999999988888888888776665544332 224699998887766555444333332
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhc-C
Q 047275 192 EKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTI-K 270 (319)
Q Consensus 192 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 270 (319)
|+.. ......+......+....+.|.+.++. +
T Consensus 175 ----------------------------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (352)
T cd06174 175 ----------------------------------------------RLLL-LLALAFFLLSFGYYGLLTYLPLYLQEVLG 207 (352)
T ss_pred ----------------------------------------------HHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 0011 122222233334556666777777665 5
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCch-HHHHhhHHhh
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKV-LFLVGGILMF 316 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~-~~~~g~~~~~ 316 (319)
.+.. .........+....++.+..+++.||+|||+ .+..+..+..
T Consensus 208 ~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (352)
T cd06174 208 LSAA-EAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAA 253 (352)
T ss_pred CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 5443 3445566777888999999999999999999 7766655543
No 65
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.9e-21 Score=174.12 Aligned_cols=153 Identities=17% Similarity=0.195 Sum_probs=132.1
Q ss_pred cccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccc
Q 047275 28 NYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
++.+.++.+.+.+++.+.+..++.++++|+++||+.||+++.++.+++.++.++++++..||++.++|.+.|+|++...+
T Consensus 61 ~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ 140 (493)
T KOG1330|consen 61 TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSP 140 (493)
T ss_pred HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcc
Confidence 34445678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHh-cccccCChh
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLG-ALILPDTPN 182 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~es~~ 182 (319)
.++.+++|.+|.++|+++.++++.+..+|..++.+.+..+..... .|||.|...++.++++.+. .++.+|.++
T Consensus 141 ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~--~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 141 IAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF--WWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred cchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc--ceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 999999999999999999999999999987777666554444332 3999999888877765544 555666543
No 66
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.83 E-value=1.1e-18 Score=160.01 Aligned_cols=249 Identities=15% Similarity=0.189 Sum_probs=159.7
Q ss_pred hhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHH
Q 047275 14 PEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLIL 93 (319)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~ 93 (319)
++..+.+.+|.+ .+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++..++++++|++.+++
T Consensus 26 ~~~lp~~~~~~~------~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 99 (381)
T PRK03633 26 NTLVPLWLAQEH------LPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLA 99 (381)
T ss_pred HHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 344444444444 34578899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhc-cccCCCcchHHHHHhhHHHHHHHHH
Q 047275 94 GRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGT-QKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 94 ~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
+|+++|++.+...+.....+.|..|+++|++..+....+..+|...+..+.... +.......|+..+.. ..+..+
T Consensus 100 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~ 175 (381)
T PRK03633 100 WRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVL----AAILPL 175 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHH----HHHHHH
Confidence 999999999999888888888999999999988888888888876666554332 211111234332211 111111
Q ss_pred hcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhh
Q 047275 173 GALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQL 252 (319)
Q Consensus 173 ~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 252 (319)
.....+|++. + ++ . .+++.+.++.+. ..... ...+...
T Consensus 176 ~~~~~~~~~~------~-~~----------~---------------------~~~~~~~~~~~~---~~~~~-~~~~~~~ 213 (381)
T PRK03633 176 LFTRILNQQA------E-NH----------D---------------------STSIWPMLKLRQ---ARLGV-NGCIISG 213 (381)
T ss_pred HHhcccCCCC------C-CC----------C---------------------CCCHHHHHHhcc---hHHHH-HHHHHHH
Confidence 1112222110 0 00 0 001111111111 11111 1111111
Q ss_pred hhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 253 TGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
........+.|.++++.+.+... ......+..+...++.+..+++.||+|||+.+..+..++
T Consensus 214 ~~~~~~~~~lp~~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~ 275 (381)
T PRK03633 214 IVLGSLYGLMPLYLNHQGMSDAS-IGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVV 275 (381)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHH
Confidence 22233345678887776665443 334444666777889999999999999998776554443
No 67
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.82 E-value=3.4e-18 Score=157.91 Aligned_cols=239 Identities=15% Similarity=0.117 Sum_probs=153.4
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh---h-chhhhHHHHHHHHHhhhhhhccc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG---A-AFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~---~-a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
.+..+.+...+.+.++..+++++.|++.||+|||+++..+..++.++.+++. . ..+++.+++.|+++|++.+...+
T Consensus 45 ~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~ 124 (402)
T TIGR00897 45 LSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAY 124 (402)
T ss_pred CCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHh
Confidence 4567888899999999999999999999999999999999999988876542 3 35788999999999999998888
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHH-HHHHHHH-hhccccCCCcchHHHHHhhHHHHHH-HHHhcccccCChhhH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGV-LGANLLN-YGTQKIKGGWGWRISLSMAAAPASI-LTLGALILPDTPNSI 184 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~-~~~~~~~-~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es~~~~ 184 (319)
....++.|++|+++|++.++....+..+|. +.+..++ +.. +.+||+..++.......+ ..+..+..+|.++..
T Consensus 125 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (402)
T TIGR00897 125 SFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI----PAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQ 200 (402)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cccchHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Confidence 888889999999999999999888888875 4444443 332 234543322221111111 112223334332110
Q ss_pred HhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHH
Q 047275 185 IQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPV 264 (319)
Q Consensus 185 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (319)
+.+++++. + +. ++.++++++ .|+.+..... .+.+....+....|.|.
T Consensus 201 --~~~~~~~~-------------~----~~----------~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~p~ 247 (402)
T TIGR00897 201 --HMQTREKF-------------S----EL----------GKAATILFT---NPNVLLGGMV-RIINTIGLFGFAVFLPM 247 (402)
T ss_pred --cccCCcch-------------h----hH----------HHHHHHHHc---ChhHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 00000000 0 00 001112222 2223322322 33333445566678888
Q ss_pred HHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Q 047275 265 LFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLF 308 (319)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~ 308 (319)
+.++.+.+..+.. ....+..+...++.+..|+++||+|||+..
T Consensus 248 ~~~~~g~s~~~~~-~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 248 FVAELGFSTSEWL-QIWGTFFFTNIVFNVIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHHcCCChhHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 8888777655433 333455677889999999999999988764
No 68
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.82 E-value=4.1e-18 Score=156.77 Aligned_cols=161 Identities=18% Similarity=0.228 Sum_probs=125.9
Q ss_pred hhhhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHH
Q 047275 12 FFPEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYML 91 (319)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~l 91 (319)
.+.+..+.+.+|.+ .++.+.++..+...++..+++++.|+++||+|||+.++.+..+..++.++..++++++.+
T Consensus 26 ~~~p~~~~i~~~~~------~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 99 (394)
T PRK11652 26 IYVPAIADMARDLN------VREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVL 99 (394)
T ss_pred HHhccHHHHHHHhC------CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 33344444444443 456788889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHH-
Q 047275 92 ILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASIL- 170 (319)
Q Consensus 92 i~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~- 170 (319)
++.|+++|++.+...+....+..|..++++|+...+....+..++...+..+..... +.+|||+.|.+.++..++.
T Consensus 100 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~---~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 100 IAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLT---TLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccChHHHHHHHHHHHHHHH
Confidence 999999999999888888888999999999998877777777777655554433221 2368999998876655443
Q ss_pred HHhcccccCCh
Q 047275 171 TLGALILPDTP 181 (319)
Q Consensus 171 ~~~~~~l~es~ 181 (319)
.+..++.||++
T Consensus 177 ~~~~~~~~~~~ 187 (394)
T PRK11652 177 FSMARWMPETR 187 (394)
T ss_pred HHHHHhCCccC
Confidence 33345677765
No 69
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.81 E-value=5e-18 Score=160.57 Aligned_cols=228 Identities=15% Similarity=0.172 Sum_probs=147.0
Q ss_pred HHHhhhhhhhhhh-----chhHH-HHHHHHHHHHHHHHhhhc---hhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCC
Q 047275 50 IASLFASKVTRAL-----GRKAS-ILVGGVAFLAGSALGGAA---FNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPK 120 (319)
Q Consensus 50 ig~~~~g~l~dr~-----GRr~~-~~~~~~~~~~~~~~~~~a---~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~ 120 (319)
++.+++|+++||+ |||+. ++.+.+...++....++. .+++.+.+.|++.|++.+...+...+++.|++|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 7899999999999 99986 556666666666666564 47888999999999999999999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHHHHHHHHH
Q 047275 121 HRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEKAKKMLQR 200 (319)
Q Consensus 121 ~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~a~~~~~~ 200 (319)
+|++..+....+..+|.+.+..+...+.. ..+|||..|.+.+...++..+..++.||+++.. +++++.
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~--~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~----~~~~~~------ 207 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLAD--RYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI----PVPKTL------ 207 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc----ccccch------
Confidence 99999999998888887766544333221 136899999887766655555555578765320 000000
Q ss_pred HcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcCCCchhhHHHH
Q 047275 201 VRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIKLSESTSLLMS 280 (319)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (319)
+++ ..+++++.+++++.. ......+..............|++.++.+.+..+.. ..
T Consensus 208 -------~~~-------------~~~~l~~~~~~~~~~---~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g-~~ 263 (491)
T PRK11010 208 -------EQA-------------VVAPLRDFFGRNNAW---LILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVG-LV 263 (491)
T ss_pred -------hhh-------------HHHHHHHHHcCcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HH
Confidence 000 011233344322211 112122222222222233445555566676655433 33
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 281 A-VVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 281 ~-~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
. .......+++.+++|+++||+|||+.++++..
T Consensus 264 ~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~ 297 (491)
T PRK11010 264 NKTLGLLATIVGALYGGILMQRLSLFRALMIFGI 297 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3 34445778999999999999999887655544
No 70
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.80 E-value=9.9e-18 Score=154.66 Aligned_cols=141 Identities=20% Similarity=0.160 Sum_probs=110.9
Q ss_pred hhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhc
Q 047275 37 LTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEM 116 (319)
Q Consensus 37 ~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~ 116 (319)
.+.+.+...++..+++++.|+++||+|||+.++.+.+...++.++...+++++.+++.|++.|++.+ ..+....++.|.
T Consensus 56 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~ 134 (408)
T PRK09874 56 SGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQ 134 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHh
Confidence 4677788888999999999999999999999999999999998888889999999999999999855 556777888999
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hcccccCCh
Q 047275 117 APPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GALILPDTP 181 (319)
Q Consensus 117 ~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~es~ 181 (319)
.|+++|++..+.......+|...+..+...+. +.++||+.|.+.++..++..+ ..+.++|.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (408)
T PRK09874 135 VPRNKSGWALGTLSTGGVSGALLGPLAGGLLA---DSYGLRPVFFITASVLFLCFLVTLFCIRENF 197 (408)
T ss_pred cCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHhCHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 99999999888887777777655544433221 236899998877765544333 344556653
No 71
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.79 E-value=1.9e-17 Score=152.83 Aligned_cols=244 Identities=16% Similarity=0.144 Sum_probs=152.5
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhh-----chhH-HHHHHHHHHHHHHHHhhhc---hhhhHHHHHHHHHhhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRAL-----GRKA-SILVGGVAFLAGSALGGAA---FNVYMLILGRVLLGVGI 102 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~-----GRr~-~~~~~~~~~~~~~~~~~~a---~~~~~li~~R~l~Gig~ 102 (319)
++.++.+.+...... .+..+++|+++||+ |||| .+..+.+...++....++. .+++.+.+..++.|+..
T Consensus 31 ~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 108 (402)
T PRK11902 31 LDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLS 108 (402)
T ss_pred CCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHH
Confidence 356777777555544 68999999999999 8876 6778788777777666665 45778888888899999
Q ss_pred hhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChh
Q 047275 103 GFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPN 182 (319)
Q Consensus 103 g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~ 182 (319)
+...++..+++.|++|+++|+++++....+..+|.+.+..+...+.. ..+|||..|.+.++..++..+...++||+++
T Consensus 109 ~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~--~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~ 186 (402)
T PRK11902 109 ASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD--RVLGWGNTYLLMAGLMLAGALTTLWAPEPEV 186 (402)
T ss_pred HHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh--cccCHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999888888887666544332211 1258999998877665554444556677643
Q ss_pred hHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhh
Q 047275 183 SIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYA 262 (319)
Q Consensus 183 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (319)
.. ++ +++..+ +. ++.++++++++..+... ...++..........+..
T Consensus 187 ~~---~~-~~~~~~---------~~-----------------~~~~~~l~~~~~~~~~l---~~~~l~~~~~~~~~~~~~ 233 (402)
T PRK11902 187 PA---RP-PRSLGE---------AV-----------------VGPLRDFFSRRGAWALL---LLIVLYKLGDAFAGSLST 233 (402)
T ss_pred cc---cc-cchhHH---------HH-----------------HHHHHHHHhCcCHHHHH---HHHHHHHhHHHHHHHHHH
Confidence 21 00 000000 00 01122333222222222 211221111111222344
Q ss_pred HHHHHhcCCCchhhHHHHHHHHH-HHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 263 PVLFRTIKLSESTSLLMSAVVTG-GVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
|++.++.+.+..... ......+ ...+++.++++++.||+|||+.+..+..
T Consensus 234 ~~l~~~~G~~~~~~g-~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~ 284 (402)
T PRK11902 234 TFLIRGAGFSAGEVG-IVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGV 284 (402)
T ss_pred HHHHHhcCCCHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 555565666644332 3332223 3478899999999999999887654443
No 72
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.79 E-value=5.5e-18 Score=157.17 Aligned_cols=243 Identities=13% Similarity=0.036 Sum_probs=158.0
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh-----hchhhhHHHHHHHHHhhhhhhccc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG-----AAFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~-----~a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
++.+.+.+.+...++..+++++.|+++||+|||+++..+..+..++....+ ..++++.+++.|+++|++.+...+
T Consensus 50 s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 129 (417)
T PRK10489 50 STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVT 129 (417)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999999999999999999999999888877776655433 256789999999999999998888
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhc
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQR 187 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~ 187 (319)
....++.|+.|+++|++..+.......+|...+..++..+. +..+||+.|.+.++..++..+..+.+||+++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 203 (417)
T PRK10489 130 ALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLI---AAGGVAWNYGLAAAGTFITLLPLLRLPALPPPP--- 203 (417)
T ss_pred HHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC---
Confidence 88899999999999999888877777777665554433221 124788888877666555555556677764321
Q ss_pred cCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH
Q 047275 188 SNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR 267 (319)
Q Consensus 188 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (319)
.+++++. ++ . ++.++.+++. +.........++... .+.+..+.|.+.+
T Consensus 204 ~~~~~~~--------------~~---~----------~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~p~~~~ 251 (417)
T PRK10489 204 QPREHPL--------------RS---L----------LAGFRFLLAS---PVVGGIALLGGLLTM--ASAVRVLYPALAD 251 (417)
T ss_pred cccccch--------------HH---H----------HHHHHHHHcC---hHHHHHHHHHHHHHH--HHhHHHhhHHHHH
Confidence 0000000 00 0 0011112211 111111212222111 2334456677776
Q ss_pred h-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHH
Q 047275 268 T-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGIL 314 (319)
Q Consensus 268 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~ 314 (319)
+ .+.+... ........++..+++.++.+++.||.++++.+..+.++
T Consensus 252 ~~~g~~~~~-~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~ 298 (417)
T PRK10489 252 EVWQMGAAQ-IGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLG 298 (417)
T ss_pred hccCCChhH-hHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHH
Confidence 6 5655433 33444556677889999999999997777665555443
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.78 E-value=1.1e-17 Score=173.42 Aligned_cols=252 Identities=13% Similarity=0.018 Sum_probs=156.4
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHH---hhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSAL---GGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~---~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
...+++.+.++++.+++++++|+++||+|||++++++.++..++.++ +..+.+++.++++|+++|++.|...+...+
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 126 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYG 126 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHh
Confidence 44677788899999999999999999999999999988766655544 334578999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcccc------CCCcchHHHHHhhH-HHHHHHHHhcccccCChhhH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKI------KGGWGWRISLSMAA-APASILTLGALILPDTPNSI 184 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~------~~~~gWr~~f~~~~-~~~~~~~~~~~~l~es~~~~ 184 (319)
++.|++|+++|+++++....+..+|.+++.+++..+... ....+|++.+.+.. ...++.++..+.+||+|...
T Consensus 127 ~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1146)
T PRK08633 127 IIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAA 206 (1146)
T ss_pred hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCC
Confidence 999999999999999998888888877666554433211 00123444433333 33333334455678876532
Q ss_pred HhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHH
Q 047275 185 IQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPV 264 (319)
Q Consensus 185 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (319)
..+.+ ++. ... ..+. .+.++.+++.+ ..........+... .......+.|.
T Consensus 207 ~~~~~--~~~---------~~~-~~~~-------------~~~~~~l~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~ 257 (1146)
T PRK08633 207 PEVFD--KKK---------YLF-PKLL-------------WRNLKLLRSDR---VLWLAIIGLSYFWF-ISQLAQANFPA 257 (1146)
T ss_pred ccccc--ccc---------ccc-HHHH-------------HHHHHHHhcCc---HHHHHHHHHHHHHH-HHHHHHHhhHH
Confidence 11100 000 000 0000 01122222221 12222221122112 22333344555
Q ss_pred HH-HhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 265 LF-RTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 265 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
++ +..+.+......+.....++..+++.++.+++.||+++|+.+.++.+++
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~ 309 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGL 309 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHH
Confidence 54 4556655413334555666777899999999999999987766555444
No 74
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=1.7e-17 Score=147.64 Aligned_cols=243 Identities=17% Similarity=0.158 Sum_probs=166.5
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhh---HHHHHHHHHhhhhhhccch
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVY---MLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~---~li~~R~l~Gig~g~~~~~ 108 (319)
+++.+..++++...+.+.+.-++.|.+.||||-|++...+.++..+-.+..+++.+++ .+++.+.+.|++ |+..+.
T Consensus 46 LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav 124 (417)
T COG2223 46 LSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAV 124 (417)
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehc
Confidence 5679999999999999999999999999999999999999999999998888885555 999999999999 677788
Q ss_pred hhHHHHhcCCCCCCcchhhHHHHHHHHHHHHH-HHHHhhccccCCCcc---hHHHHHhhHHHHHH-HHHhcccccCChhh
Q 047275 109 VPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGA-NLLNYGTQKIKGGWG---WRISLSMAAAPASI-LTLGALILPDTPNS 183 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~g---Wr~~f~~~~~~~~~-~~~~~~~l~es~~~ 183 (319)
.+.++++|+||+++|.+.+++. .-.+|.... ........ ..+ ||..-.+..++.++ ....++...|.|..
T Consensus 125 ~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~----~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~ 199 (417)
T COG2223 125 GMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV----AFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEH 199 (417)
T ss_pred ccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh
Confidence 8899999999999999888887 444443222 22222221 134 88776665555445 33445556666543
Q ss_pred HHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhH
Q 047275 184 IIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAP 263 (319)
Q Consensus 184 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (319)
....+. .+. .+++.++ .+++++ .+...++.++.++-.++.+.|
T Consensus 200 r~~~~~--~~~-------------------------------~~~~~v~---~~~~~W-~lsllY~~tFG~Fvgfs~~l~ 242 (417)
T COG2223 200 RASVKP--QLP-------------------------------AQLKAVF---SNKDTW-LLSLLYFATFGGFVGFSAYLP 242 (417)
T ss_pred hccccc--cch-------------------------------hHHHHHh---cCcchH-HHHHHHHHHHHHHHHHHHHHH
Confidence 111100 000 0011111 123333 455556667777788888889
Q ss_pred HHHH-hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhhc
Q 047275 264 VLFR-TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFVS 318 (319)
Q Consensus 264 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~~ 318 (319)
.+++ +++.+.. .....+..........=.++|+++||+|.++.+++..+.|.++
T Consensus 243 ~~~~~~fg~~~~-~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~ 297 (417)
T COG2223 243 MYLVTQFGLSPV-TAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALA 297 (417)
T ss_pred HHHHHhcCCChh-hHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHH
Confidence 8875 5565544 3334444444555555668999999999998877766666543
No 75
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.76 E-value=1e-16 Score=147.52 Aligned_cols=235 Identities=15% Similarity=0.191 Sum_probs=138.0
Q ss_pred CcchhhHHhHHHHH-HHHHHHhhhhhhhhhhchhHHH-HHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 33 NSQLLTTFTSSPFI-AGLIASLFASKVTRALGRKASI-LVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 33 ~~~~~~~~~~~~~~-g~~ig~~~~g~l~dr~GRr~~~-~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
+..+.+.+.++.++ +..++.+..++ .||+|||+.+ +.+.+...++..+.+++++++.+++.+.+.|...+...+...
T Consensus 49 s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 127 (393)
T PRK15011 49 RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMF 127 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 45677777665544 55666666666 9999999875 455566667777778889999887666555555556777778
Q ss_pred HHHHhcCCCCCCc--chhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH-HhcccccCChhhHHhc
Q 047275 111 LYLSEMAPPKHRG--AFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT-LGALILPDTPNSIIQR 187 (319)
Q Consensus 111 ~~i~e~~p~~~Rg--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~es~~~~~~~ 187 (319)
.++.|+.|+++|. .+++....+..+|.+.+..++..+. +++|||..|.+.++..++.. +.+.++||+++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~---~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--- 201 (393)
T PRK15011 128 ALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALA---MGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKEL--- 201 (393)
T ss_pred HHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHH---HhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCC---
Confidence 8888888777663 3445666666677665555443322 23689999988776655443 3355678765310
Q ss_pred cCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH
Q 047275 188 SNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR 267 (319)
Q Consensus 188 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (319)
+ ++ . ++.+ . .++ +++..+.......... .....+..+.|.+++
T Consensus 202 -~-~~-~--------~~~~------~------------------~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~l~ 244 (393)
T PRK15011 202 -P-LA-T--------GTLE------A------------------PRR-NRRDTLLLFVICTLMW-GTNSLYIINMPLFII 244 (393)
T ss_pred -c-cc-c--------cccc------c------------------ccc-ccccHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 0 00 0 0000 0 000 0111111222222221 223334456776664
Q ss_pred -hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhh
Q 047275 268 -TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGG 312 (319)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~ 312 (319)
+.+.+..... ..........+++.++.|+++||+|||+....+.
T Consensus 245 ~~~~~~~~~~g-~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~ 289 (393)
T PRK15011 245 NELHLPEKLAG-VMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAA 289 (393)
T ss_pred HHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 4555543332 3333444566788999999999999998766544
No 76
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.76 E-value=1.6e-16 Score=146.74 Aligned_cols=144 Identities=18% Similarity=0.237 Sum_probs=117.6
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++...+...+...+...+.+++.|+++||+|||+++..+.....++.+.+..+++++.+++.|+++|++.+...+....
T Consensus 43 ~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~ 122 (400)
T PRK11646 43 WAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTA 122 (400)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677788888888888888999999999999999999999999999999999999999999999999999988888899
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH-HhcccccC
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT-LGALILPD 179 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~e 179 (319)
++.|++|+++|++..+.......+|...+..++.... .++||+.|.+.++..++.. +..+++||
T Consensus 123 ~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~----~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 123 LVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL----QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999888888888888666655443322 2689999988766554433 22344554
No 77
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.76 E-value=1.5e-17 Score=155.98 Aligned_cols=136 Identities=18% Similarity=0.159 Sum_probs=109.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHH-HHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLIL-GRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~-~R~l~Gig~g~~~~~~~ 110 (319)
.+..+.++..+.++++..++.++.|+++||+|||++++.+.+++.++.++++++++++.+++ .|+++|++.|...++..
T Consensus 51 ~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~ 130 (455)
T TIGR00892 51 ATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSL 130 (455)
T ss_pred cchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHH
Confidence 35577888888888888999999999999999999999999999999999999999998875 57999999998777777
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-HhhccccCCCcchHHHHHhhHHHHHHHHH
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
.++.|++| ++|++..+....+..+|...+..+ +... +.+|||+.|.+.++..++..+
T Consensus 131 ~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~----~~~gwr~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 131 TMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLF----ESFGWRGSFLILGGLLLHCCV 188 (455)
T ss_pred HHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHH----HHhChHHHHHHHHHHHHHHHH
Confidence 88899986 789998888888888775544433 3322 246899999887766554333
No 78
>PRK10054 putative transporter; Provisional
Probab=99.74 E-value=8.4e-17 Score=148.26 Aligned_cols=146 Identities=12% Similarity=0.055 Sum_probs=116.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.+..+.++..+...+++.+++++.|+++||+|||++++.+.+...++.++.+++++++.++++|.+.|.+.+...+....
T Consensus 40 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 119 (395)
T PRK10054 40 LSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKA 119 (395)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888888889999999999999999999999999999999998888889999999999999999988888888899
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hcccccCCh
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GALILPDTP 181 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~es~ 181 (319)
+..|..|+++|++..+.......+|...+..++.... ..+||..|.+.++..++..+ ..+++||++
T Consensus 120 ~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~----~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 120 WFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV----MQSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999998877777777777665554443332 14799998876665554333 334455553
No 79
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.74 E-value=5.8e-16 Score=146.51 Aligned_cols=132 Identities=24% Similarity=0.297 Sum_probs=101.2
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
++...|+...+.++..++.++.|+++|.||||.+++.+.++..+|+++++-++|...++.+-.+.|+|.|.... ....+
T Consensus 77 ~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~i 155 (599)
T PF06609_consen 77 SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAI 155 (599)
T ss_pred CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHH
Confidence 45666888889999999999999999999999999999999999999999999999999999999999877764 55668
Q ss_pred HhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH
Q 047275 114 SEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 114 ~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~ 169 (319)
+|..|.|.|+................+...+..+ ..+.+|||.|++.++...+
T Consensus 156 sEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~---~~~~~WRw~~~~~~i~~~i 208 (599)
T PF06609_consen 156 SELVPNKWRGLGLAIASIPFIITTWISPLIAQLF---AAHSGWRWIFYIFIIWSGI 208 (599)
T ss_pred HHhcccchhhhHhHHHHHHHHhhhcccHHHHHHh---ccCCCcchHHHHHHHHHHH
Confidence 9999999998654433332222221222222211 2235799998876665444
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.74 E-value=2.1e-16 Score=163.90 Aligned_cols=240 Identities=12% Similarity=0.040 Sum_probs=151.7
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHH---HHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILV---GGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~---~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
...+...+.+++...+.+++.|+++||+|||+++.. ..+........+....+++.++++|+++|++.+...++..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 345666777888999999999999999999997543 22233333333444589999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCCh
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~ 191 (319)
++.|++|+++|+.+++..+.+..+|.+++.+++.++.. ..+|++.|....+..++..+..+++|+++... .+. .
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~ 205 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI---SGNFVILVALLMGIAVLGWLASLFIPKTGNAA--PDL-K 205 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh---ccccHHHHHHHHHHHHHHHHHHhhCCCCCCCC--CCC-e
Confidence 99999999999999999999999988777665544322 35899988555555445555556677664310 000 0
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHh-cC
Q 047275 192 EKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRT-IK 270 (319)
Q Consensus 192 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 270 (319)
.+. ....+. ...++.+.+ .+.++. .....+........+..+.|.++++ .+
T Consensus 206 ~~~-----------~~~~~~-------------~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~g 257 (1140)
T PRK06814 206 IDR-----------NIIRST-------------ITLLKYAKA---DKRIWL-AILGISWFWLVGAVVLSQLPLLAKETLG 257 (1140)
T ss_pred ecc-----------chHHHH-------------HHHHHHHhc---CchHHH-HHHHHHHHHHHHHHHHHHhHHHHHHHcC
Confidence 000 000000 001112221 122222 2222222222233444567777654 45
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFL 309 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~ 309 (319)
.+.. .........++..+++.+..+++.||.++++...
T Consensus 258 ~~~~-~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~ 295 (1140)
T PRK06814 258 GDEN-VATLFLAVFSVGVAVGSFLASKLSEGRITLLYVP 295 (1140)
T ss_pred CchH-HHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeeh
Confidence 5543 3445556667778899999999998877665433
No 81
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.71 E-value=2.8e-15 Score=138.17 Aligned_cols=247 Identities=14% Similarity=0.094 Sum_probs=137.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHh---hhc-----hhhhHHHHHHHHHhhhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALG---GAA-----FNVYMLILGRVLLGVGIG 103 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~---~~a-----~~~~~li~~R~l~Gig~g 103 (319)
.++.+.+...+...++..+++++.|+++||+|||+.++.+.....++.... .+. .....+++.|++.|++.+
T Consensus 35 ~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 114 (396)
T TIGR00882 35 LSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFS 114 (396)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 456788899999999999999999999999999999988777665543321 111 223456778999999999
Q ss_pred hccchhhHHHHhcCCCCCC--cchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhccc-ccCC
Q 047275 104 FSNQSVPLYLSEMAPPKHR--GAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALI-LPDT 180 (319)
Q Consensus 104 ~~~~~~~~~i~e~~p~~~R--g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~-l~es 180 (319)
...+....++.|..+++.+ |.......++..+|...+..+ . .++||.+|.+.+...++..+..+. .||+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l----~----~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 115 AGAGAIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGIL----F----SIDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred cchhhHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhh----h----ccCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 8888888888776443321 333333334444443333222 1 258999998877665554433333 4444
Q ss_pred hhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHh
Q 047275 181 PNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISF 260 (319)
Q Consensus 181 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (319)
|+. ++.++..+ ...+ +...++++++++. |+.+......+. ....++....
T Consensus 187 ~~~--------~~~~~~~~-~~~~-----------------~~~~~~~~~~l~~---~~~~~~~l~~~~-~~~~~~~~~~ 236 (396)
T TIGR00882 187 PSS--------ATVANALG-ANAS-----------------AFSLKLALELFRQ---RKFWMFVLYVVG-VACVYDVFDQ 236 (396)
T ss_pred chh--------hhhhcccc-cccC-----------------CCCHHHHHHHHcC---CcHHHHHHHHHH-HHHHHHHHHH
Confidence 321 00000000 0000 0001112233322 222222222221 1222333333
Q ss_pred hhHHHHHhcCCC---chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 261 YAPVLFRTIKLS---ESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 261 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
+.|.+++..... ..........+..+...++.+..+++.||+|||+.+.++..++.
T Consensus 237 ~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 237 QFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 445554443211 11222333445556677888999999999999998877766543
No 82
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.71 E-value=3.3e-16 Score=143.18 Aligned_cols=262 Identities=14% Similarity=0.116 Sum_probs=166.7
Q ss_pred cCcch-hhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQL-LTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~-~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
+++++ .+.+.+.++.+.++..++.|+++||+|-|+++..+.+.+++.+++.+++.++..+.+.|++.|++.|+.. ...
T Consensus 58 lT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~ 136 (511)
T TIGR00806 58 FTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYS 136 (511)
T ss_pred CCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 34566 8899999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhh---HHHHHHHHHhcccccCChhhHHhc
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMA---AAPASILTLGALILPDTPNSIIQR 187 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~---~~~~~~~~~~~~~l~es~~~~~~~ 187 (319)
.+++.|+|+++|+++.+....+..+|.+++.++..++. .+|||+-+.+. .....+.++..+++|..++.+.-+
T Consensus 137 syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~----s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~ 212 (511)
T TIGR00806 137 SYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV----TLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFN 212 (511)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhc
Confidence 99999999999999999999999999777665554432 36888765432 233334445567788555544333
Q ss_pred cCChHH-H-HHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHH
Q 047275 188 SNGHEK-A-KKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVL 265 (319)
Q Consensus 188 ~~~~~~-a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (319)
+++..+ . ....+........+.+ +..+ . ......+.-..++ +.-+..+.+....+......++++-+..|...+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~l~~~~-~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~L 288 (511)
T TIGR00806 213 RLEDVRGALPCELDQMVPGPGGKLE-DYLG-T-CRDSFLVRMLSEL-VTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTL 288 (511)
T ss_pred cccccccccccccccCCCCCccccc-hhhh-h-hhhHHHHHHHHHH-HHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHH
Confidence 221100 0 0000000000000000 0000 0 0000000111111 122233334445555666778888888999888
Q ss_pred HHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 047275 266 FRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKL 302 (319)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 302 (319)
.++..-+.+.-.+..-.+..+...++.+..|++-.++
T Consensus 289 W~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w 325 (511)
T TIGR00806 289 WGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRW 325 (511)
T ss_pred HHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 8776443221111222233344556677777775554
No 83
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.70 E-value=3e-15 Score=137.31 Aligned_cols=241 Identities=12% Similarity=0.111 Sum_probs=148.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHH----HHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASI----LVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~----~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
.+..+.+.+.++..+...++++++|+++||+||++.. ..+..++.+ ..+..+++++.+++.|+++|.+.++..+
T Consensus 36 ~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p 113 (382)
T TIGR00902 36 LGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMP 113 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchh
Confidence 4578899999999999999999999999999985433 222222222 2445678999999999999999999888
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-HhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHh
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQ 186 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~ 186 (319)
....++.|+ +++|++..+......++|.+.+..+ +... +.+|||..|.+......+..+ ...++|+++.
T Consensus 114 ~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~----~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~--- 183 (382)
T TIGR00902 114 IGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLI----GMFDEQNILAILTAGLAFMLI-GFLIKPTIPP--- 183 (382)
T ss_pred HHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHH----HHcChhHHHHHHHHHHHHHHH-HHHcCCCCCC---
Confidence 888887775 4667766666666666776555543 3322 236899998775544322222 2233443211
Q ss_pred ccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHH
Q 047275 187 RSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLF 266 (319)
Q Consensus 187 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (319)
+++ +++. + . +..+.++++++ +|+.+......++.+.. ......+.|.++
T Consensus 184 ~~~-~~~~--------~-~-----------------~~~~~~~~~l~---~~~~~~~l~~~~l~~~~-~~~~~~~~~~~l 232 (382)
T TIGR00902 184 KDA-IPED--------E-S-----------------QGDSAFIALLK---NPMNLRFLAAVCLIQGA-HAAYYGFSAIYW 232 (382)
T ss_pred Ccc-cccc--------c-c-----------------ccchhHHHHHc---ChHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 000 0000 0 0 00011222222 23333333333333333 344444556666
Q ss_pred HhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 267 RTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
++.+.+..... ....+..+.++++....+++.||+|+|+++.++.+++.
T Consensus 233 ~~~g~s~~~~g-~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 233 QAAGISASATG-LLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACV 281 (382)
T ss_pred HHCCCCHhHHH-HHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHH
Confidence 77776654433 34445667888899999999999999998887776664
No 84
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.69 E-value=4.3e-15 Score=136.25 Aligned_cols=242 Identities=12% Similarity=0.088 Sum_probs=141.7
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchh----HHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRK----ASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr----~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
.+..+.+.+.+...++..+++++.|++.||+||| +.+....... .......+++++.+++.|++.|++.+...+
T Consensus 36 ~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~ 113 (382)
T PRK11128 36 YTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVP 113 (382)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHccccc
Confidence 3568889999999999999999999999999984 3332222221 222344568899999999999999999999
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhc
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQR 187 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~ 187 (319)
...+++.++.+ +|++..+.......+|..++..++..+ .+++|||..|.+.++..++..+.....||.++.
T Consensus 114 ~~~a~~~~~~~--~~~~a~~~~~~~~~lg~~igp~lgg~l---~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~---- 184 (382)
T PRK11128 114 LTDALANTWQK--QIGLDYGKVRLWGSIAFVIGSALTGKL---VSWFGEQAILWILTAGVASMLLGQLLRPTIMPQ---- 184 (382)
T ss_pred HHHHHHHHHHh--hccCCcchHHHHHHHHHHHHHHHHHHH---HHHcChhHHHHHHHHHHHHHHHHHHccCCCCCc----
Confidence 88888887743 445433444444455554444433322 123689999877665443333333344543211
Q ss_pred cCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH
Q 047275 188 SNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR 267 (319)
Q Consensus 188 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (319)
.+ +++. .+ +..+.++++++. |+.+......++.+.. ......+.|.+.+
T Consensus 185 ~~-~~~~---------~~-----------------~~~~~~~~i~~~---~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 233 (382)
T PRK11128 185 GE-SRQQ---------ES-----------------AGWPAWKALLKE---PTVWRFLLCVSLLQGS-HAAYYGFSAIYWQ 233 (382)
T ss_pred cc-cccc---------cc-----------------cccchHHHHHcC---hhHHHHHHHHHHHHHH-hHhHHHHHHHHHH
Confidence 00 0000 00 001122333322 2222222222222222 2333344455656
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 268 TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
+.+.+... ......+..+...+.....+++.||+|+|+.+..+..++.
T Consensus 234 ~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~ 281 (382)
T PRK11128 234 AAGYSAST-IGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGV 281 (382)
T ss_pred HCCCCHhH-HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 66666443 3334445566778888999999999999998776665544
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.69 E-value=6.3e-16 Score=144.05 Aligned_cols=250 Identities=16% Similarity=0.167 Sum_probs=153.0
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhh----hchh-HHHHHHHHHHHHHHHHhhhchh------hhHHHHHHHHHhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRA----LGRK-ASILVGGVAFLAGSALGGAAFN------VYMLILGRVLLGV 100 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr----~GRr-~~~~~~~~~~~~~~~~~~~a~~------~~~li~~R~l~Gi 100 (319)
.++.+.+.+.+...+...+..++.|+++|| +||| +.++.+...+.++.+++...++ ...+++.+++.++
T Consensus 32 ~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (437)
T TIGR00792 32 LSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGL 111 (437)
T ss_pred CCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHH
Confidence 457888889999999999999999999997 7885 4677777778877777666553 4567888999999
Q ss_pred hhhhccchhhHHHHhcC-CCCCCcchhhHHHHHHHHHHHHHHHH-Hhhccc---cCCCcchHHHHHhhHHHHHHHH-Hhc
Q 047275 101 GIGFSNQSVPLYLSEMA-PPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQK---IKGGWGWRISLSMAAAPASILT-LGA 174 (319)
Q Consensus 101 g~g~~~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~---~~~~~gWr~~f~~~~~~~~~~~-~~~ 174 (319)
+.+....+..++..|.+ ++++|++..+....+..+|.++...+ ...... ..+.++||+.+.+.++..++.. +..
T Consensus 112 ~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 191 (437)
T TIGR00792 112 FYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICF 191 (437)
T ss_pred HHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888889987 56889988777777777764433322 222211 1234789999887776655543 334
Q ss_pred ccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhh
Q 047275 175 LILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTG 254 (319)
Q Consensus 175 ~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (319)
+..+|.+... + .++. ...+. ++.++.+++ +|+........++ ....
T Consensus 192 ~~~~e~~~~~----~-~~~~--------~~~~~-----------------~~~~~~l~~---~~~~~~~~~~~~~-~~~~ 237 (437)
T TIGR00792 192 FGTKERYSEI----P-KNIE--------KKLSL-----------------KQIFKALFK---NDQLLILCLAYLF-YNLA 237 (437)
T ss_pred cCCEecCCCC----C-cccc--------cCCCH-----------------HHHHHHHhC---CHHHHHHHHHHHH-HHHH
Confidence 5667754210 0 0000 00000 001112221 2222222222222 2222
Q ss_pred hhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 255 INVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
.+....+.+++.+........ ......+..+..+++.++.+++.||+|||+....+..++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~ 298 (437)
T TIGR00792 238 FNIKNGVQVYYFTYVLGDPEL-FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMV 298 (437)
T ss_pred HHHHcchhheeEeeecCChHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 333333445544332222222 2233444567788899999999999999998777765544
No 86
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.69 E-value=6.7e-15 Score=138.95 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=103.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhh-hchhHHHHHHHHHHHHHHHHhhhchhhhH-HHHHHHHHhhhhhhccchh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRA-LGRKASILVGGVAFLAGSALGGAAFNVYM-LILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr-~GRr~~~~~~~~~~~~~~~~~~~a~~~~~-li~~R~l~Gig~g~~~~~~ 109 (319)
.+..+..++.+.+.....+..+++|+++|| +|||++++.+.+++.+++++++++.+... +.++|+++|+|.|...+..
T Consensus 47 ~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~ 126 (489)
T PRK10207 47 FSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANP 126 (489)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCH
Confidence 345666677777776777778899999999 99999999999999999999998876554 5589999999999999999
Q ss_pred hHHHHhcCCCCC--CcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHH
Q 047275 110 PLYLSEMAPPKH--RGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAA 165 (319)
Q Consensus 110 ~~~i~e~~p~~~--Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~ 165 (319)
..+++|.+|+++ |+...+.++.+..+|...+..++..+. ++.|||+.|.+..+
T Consensus 127 ~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~---~~~gw~~~F~i~~i 181 (489)
T PRK10207 127 ASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIA---DKFGYSVTYNLCGA 181 (489)
T ss_pred HHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHH---HhhChHHHHHHHHH
Confidence 999999998874 466667777778888766554433222 23689999988654
No 87
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=8.1e-16 Score=134.88 Aligned_cols=109 Identities=18% Similarity=0.106 Sum_probs=94.4
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
.....+.+.+++.++.++.++.+|.++||+|||++++.++....+...+-+.+.|+..++.+|++.|+.-|-. ....++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHHH
Confidence 3567788899999999999999999999999999999999999999999999999988888899999997755 566789
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHH
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANL 142 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~ 142 (319)
++|.+++++|+..++..++.+++|.++++.
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPm 174 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPM 174 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcch
Confidence 999999999998777777777776554443
No 88
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.63 E-value=2.3e-14 Score=133.13 Aligned_cols=140 Identities=14% Similarity=0.058 Sum_probs=77.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh---hch-----hhhHHHHHHHHHhhhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG---AAF-----NVYMLILGRVLLGVGIG 103 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~---~a~-----~~~~li~~R~l~Gig~g 103 (319)
.+..+.+.+.+...++..+++++.|+++||+|||++++.+.....++..... .+. ......+++++.|.+..
T Consensus 43 ~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (420)
T PRK09528 43 LSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFL 122 (420)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 4678899999999999999999999999999999999887666554433211 111 11112233444443333
Q ss_pred hccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 047275 104 FSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALIL 177 (319)
Q Consensus 104 ~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l 177 (319)
...+....+..+. +++||+..+.......+|..++..+...+. ..+||..|.+.++..++..+..+.+
T Consensus 123 ~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~----~~~~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 123 AGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILF----NINPQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred cchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHH----hcCchHhHHHHHHHHHHHHHHHhcc
Confidence 3333333333222 234554433333333444333322222111 1378999888776665544444443
No 89
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.62 E-value=5.2e-15 Score=140.19 Aligned_cols=166 Identities=14% Similarity=0.144 Sum_probs=119.5
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHH---hhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSAL---GGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~---~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
...........++..++.++.|+++||+|||+++..+.+...++... ...+.+...++++|++.|++.++.......
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 365 (490)
T PRK10642 286 DHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMAS 365 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556677788899999999999999999988877654443332 223456778889999999988887778888
Q ss_pred HHHhcCCCCCCcchhhH-HHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhc---
Q 047275 112 YLSEMAPPKHRGAFNIG-FQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQR--- 187 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~--- 187 (319)
++.|.+|++.||...+. .+++...|.+...+.++..+.. .+|+.++.+..+++++..+..+++||+|+++..+
T Consensus 366 ~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~---~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~~~ 442 (490)
T PRK10642 366 TLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST---QNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGATP 442 (490)
T ss_pred HHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCccc
Confidence 89999999999986553 5665555655555655544321 3577776666666666555666789999997653
Q ss_pred -cCChHHHHHHHHHHcC
Q 047275 188 -SNGHEKAKKMLQRVRG 203 (319)
Q Consensus 188 -~~~~~~a~~~~~~~~~ 203 (319)
+++.+||++.++|.++
T Consensus 443 ~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 443 AASDIQEAKEILVEHYD 459 (490)
T ss_pred cccchhhHHHHhhcccc
Confidence 2447889999988874
No 90
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.62 E-value=7.6e-14 Score=129.55 Aligned_cols=243 Identities=10% Similarity=0.042 Sum_probs=140.4
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhch-hHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGR-KASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GR-r~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
++..+.+++.++..++.++++++.|+++||+|| |+++..+.+...++..+..+.++++.+.+.|++.|++.++..+...
T Consensus 35 ~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 114 (418)
T TIGR00889 35 FSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTN 114 (418)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHH
Confidence 457889999999999999999999999999965 7788888888888888888889999999999999998777766555
Q ss_pred HHHH--------hcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChh
Q 047275 111 LYLS--------EMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPN 182 (319)
Q Consensus 111 ~~i~--------e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~ 182 (319)
+... |......|.+..+ .+++.+|.+++..+.. ...|+. |++.++..++..+..+++||+|+
T Consensus 115 ~l~~~~~~~~g~~~~~~~~~~r~~G--~lG~~ig~~l~g~l~~-------~~~~~~-f~~~~~~~~~~~~~~~~~~e~~~ 184 (418)
T TIGR00889 115 SISYANLPQAGLDVVTDFPPIRVMG--TIGFIAAMWAVSLLDI-------ELSNIQ-LYITAGSSALLGVFALTLPDIPV 184 (418)
T ss_pred HHHHHHHhhcCCCchhcCCCeeeeh--hHHHHHHHHHHHHhcc-------cchhHH-HHHHHHHHHHHHHHHhcCCCCCC
Confidence 4432 2233233443332 2445555444433211 124654 44444433343344567888753
Q ss_pred hHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhh
Q 047275 183 SIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYA 262 (319)
Q Consensus 183 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (319)
.. +++++ +.++.. ....+++++.+ +........++.+. .......+.
T Consensus 185 ~~----~~~~~------------~~~~~~-------------~~~~~~~~k~~---~~~~~~~~~~~~~~-~~~~~~~~~ 231 (418)
T TIGR00889 185 AK----STAKM------------SIKVML-------------GLDAFILFKNK---RMAIFFFFSMLLGA-PLQITNIFG 231 (418)
T ss_pred Cc----ccccc------------CHHHHh-------------hhhHHHHhcCC---CeeeHHHHHHHHHh-HHHHHHHhH
Confidence 10 10000 000000 00011111111 11112222222211 112222344
Q ss_pred HHHHHhcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhh
Q 047275 263 PVLFRTIKLSES-------TSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFV 317 (319)
Q Consensus 263 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~ 317 (319)
|.++++.+.+.. ........+..+.++++.+..++++||+|||++++++.+++.+
T Consensus 232 ~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v 293 (418)
T TIGR00889 232 NGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWAL 293 (418)
T ss_pred HHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 555555443321 1223445556667888899999999999999998777765543
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.59 E-value=4.2e-13 Score=126.57 Aligned_cols=134 Identities=14% Similarity=0.188 Sum_probs=111.2
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhh-hchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRA-LGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr-~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
++..+.+.+.+.+.++..+++++.|+++|| +|||+++..+.++..++.++.+++++++.++++|++.|+|.|+..+...
T Consensus 45 ~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~ 124 (475)
T TIGR00924 45 FSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPS 124 (475)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHH
Confidence 456778888899999999999999999999 8999999999999999999999998999999999999999999999999
Q ss_pred HHHHhcCCCCC---CcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHH
Q 047275 111 LYLSEMAPPKH---RGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPAS 168 (319)
Q Consensus 111 ~~i~e~~p~~~---Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~ 168 (319)
.+++|++|+++ |+...+..+.+..+|...+..+...+. ++.|||+.|.+.++..+
T Consensus 125 ~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~---~~~g~~~~f~~~~~~~~ 182 (475)
T TIGR00924 125 SMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA---ENYGYHVGFNLAAVGMV 182 (475)
T ss_pred HHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH---HhcChHHHHHHHHHHHH
Confidence 99999998764 777777777777777666654433222 23689999987665433
No 92
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=5.9e-15 Score=130.23 Aligned_cols=141 Identities=18% Similarity=0.154 Sum_probs=117.9
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
++...+++.++..+.+++.+++.|++.||+|+|..++.++++....+++.++..+|++++++|.+||+|.+.......++
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 35677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCC-CcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhccc
Q 047275 113 LSEMAPPKH-RGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALI 176 (319)
Q Consensus 113 i~e~~p~~~-Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~ 176 (319)
++|.+|+++ ||..+++.-.+.++|.+.+...+..+- +..|.+.+|++.++.+++-....++
T Consensus 184 lAd~f~~d~er~~vmGialgfislG~lvgPpfGGilY---e~~Gk~aPFlVL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 184 LADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILY---EFAGKSAPFLVLAIVLLLDGALQLL 245 (464)
T ss_pred HHHHcccchhhhHHHHHHHHHHhccceecCCcccchH---hhcCCcCcHHHHHHHHHHHHHHHHh
Confidence 999999765 799888888888888666554433221 2257889998877776654333333
No 93
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.50 E-value=1.9e-13 Score=106.15 Aligned_cols=135 Identities=27% Similarity=0.343 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCC
Q 047275 42 SSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKH 121 (319)
Q Consensus 42 ~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~ 121 (319)
+...++..+++++.|++.||+|||+.+..+.....++.+.....++++.+.+.+++.|++.+...+....++.|..|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 34567888999999999999999999999999999998888888999999999999999999999999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hcccccC
Q 047275 122 RGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GALILPD 179 (319)
Q Consensus 122 Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~e 179 (319)
|++..+.......+|...+..+.... .+..+||+.+.+.+...++..+ ..+..||
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVL---AQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHH---hcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99988888888888766555443322 2346799988876665554433 3344454
No 94
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.49 E-value=3e-13 Score=127.44 Aligned_cols=262 Identities=21% Similarity=0.236 Sum_probs=164.7
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHH-HHHHHhhhhhhccchhhHH
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLIL-GRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~-~R~l~Gig~g~~~~~~~~~ 112 (319)
+...+++.+.......+.+++.+.+.||||.|++.+.+.++..++.+++.++++++.+++ .=++.|+|.|+.+.++.+.
T Consensus 80 ~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paivi 159 (509)
T KOG2504|consen 80 SSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVI 159 (509)
T ss_pred ccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhh
Confidence 455788888888888899999999999999999999999999999999999999987765 4589999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHH-HHHHHHhhccccCCCcchHHHHHhhHHHHHHHH-HhcccccCChhhHHh---c
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVL-GANLLNYGTQKIKGGWGWRISLSMAAAPASILT-LGALILPDTPNSIIQ---R 187 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~es~~~~~~---~ 187 (319)
+..+++ ++|+.++++...+.++|.+ .+.+..++.+ ..|||..+.+.+...+-.. .....-|.+++.... +
T Consensus 160 v~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~----~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~ 234 (509)
T KOG2504|consen 160 LGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLS----KYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKD 234 (509)
T ss_pred hhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHH----HhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhh
Confidence 997665 7789999999988888854 4455555443 3689998776554443322 233334433321100 0
Q ss_pred cCC----hHHHHHHHHHHcCC-hhHHH-----HHHHHHHHHhhcc--ccccch----hhhhcccchhHHHHHHHHHHHHh
Q 047275 188 SNG----HEKAKKMLQRVRGT-ADVQA-----ELDDLIRASIVSR--TVKHPF----QTIIQRKYRPQLVMAILIPFFQQ 251 (319)
Q Consensus 188 ~~~----~~~a~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~--~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~ 251 (319)
.++ .+.+....++.... +.... +.++..+.+...+ ..++.+ .+++ +.+..+.+.......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll----~~~~fl~~~~~~~~~ 310 (509)
T KOG2504|consen 235 LRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLL----KDPKFLLLALSNLFA 310 (509)
T ss_pred hccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHH----cCchHHHHHHHHHHH
Confidence 000 00000000000000 00000 0000000000000 001111 1222 223344444444445
Q ss_pred hhhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 047275 252 LTGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRK 305 (319)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 305 (319)
..+++.-..++|.+.++.+....... ....+.+...+++-++.|++.|+...+
T Consensus 311 ~~g~~~p~~~l~~~~~~~g~~~~~aa-~l~Siigi~~i~gRi~~G~laD~~~~~ 363 (509)
T KOG2504|consen 311 YLGFNVPFVYLPSYAKSLGLSSNDAA-FLLSIIGVSDIIGRIILGLLADKPGIR 363 (509)
T ss_pred HHHHHHHHHHHHHHHhhcCCChhhhH-HHHHHHHHhhhhhhhhhhhhcCccccc
Confidence 55666667788888887777766555 556677889999999999999998844
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.47 E-value=9.7e-12 Score=114.35 Aligned_cols=240 Identities=12% Similarity=0.069 Sum_probs=135.0
Q ss_pred CcchhhHHh--HHHHHHHHHHHhhh-hhhhhhhchhHHHHHHHHHHHH--HHHHh--hhchh-hhHHHHHHHHHhhhhhh
Q 047275 33 NSQLLTTFT--SSPFIAGLIASLFA-SKVTRALGRKASILVGGVAFLA--GSALG--GAAFN-VYMLILGRVLLGVGIGF 104 (319)
Q Consensus 33 ~~~~~~~~~--~~~~~g~~ig~~~~-g~l~dr~GRr~~~~~~~~~~~~--~~~~~--~~a~~-~~~li~~R~l~Gig~g~ 104 (319)
++++.+.+. +...+..++.+++. ++..||+||||.+++...+... ...+. ....+ ...++..-++.++..+.
T Consensus 34 ~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 113 (390)
T TIGR02718 34 PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASAT 113 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHH
Confidence 467777763 55577777777777 4579999999987665533222 11111 11222 33445555666677777
Q ss_pred ccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHH-hhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhh
Q 047275 105 SNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLN-YGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNS 183 (319)
Q Consensus 105 ~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~ 183 (319)
..+....+..|..++++++.+++....+..+|.+.+.... +.. +.+|||..|.+.+...++..+..++++|+++.
T Consensus 114 ~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~----~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~ 189 (390)
T TIGR02718 114 QDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLF----GKFGQRPAFLLVACVPLASLVCVLWLKDRAVA 189 (390)
T ss_pred HHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 7777778888999999989887777777778876665432 322 23689999988776655544444444443211
Q ss_pred HHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhH
Q 047275 184 IIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAP 263 (319)
Q Consensus 184 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (319)
+.+ .++ + + .++++++++++.. .......++.......... +.+
T Consensus 190 ---~~~-~~~--~-------------~--------------~~~~~~~l~~~~~---~~~~~~~~l~~~~~~~~~~-~~~ 232 (390)
T TIGR02718 190 ---SPE-APL--A-------------R--------------RASLFRFFRRPLA---WSLLALALLSAMTAVSGFG-LSK 232 (390)
T ss_pred ---ccc-cch--h-------------h--------------HHHHHHHHcCcCH---HHHHHHHHHHHHHHHHHHH-Hhh
Confidence 000 000 0 0 0012223322221 1222222222222222223 445
Q ss_pred HHHHhcCCCchhhHHHHHHHHH-HHHHHHHHHHHHHHHhcCCchHHHHhhHH
Q 047275 264 VLFRTIKLSESTSLLMSAVVTG-GVSTIATITSMILTDKLGRKVLFLVGGIL 314 (319)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~g~~~ 314 (319)
.++++.+.+.+... ......+ ...+++.+..+++.||+|+|+....+..+
T Consensus 233 ~~l~~~G~s~~~ig-~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 283 (390)
T TIGR02718 233 LYLVDAGWPLEWIG-RLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGL 283 (390)
T ss_pred HHHHhcCCCHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 55566676655433 3333333 34567788999999999999887655543
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.47 E-value=6e-12 Score=117.47 Aligned_cols=151 Identities=13% Similarity=0.125 Sum_probs=102.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhh----hhchhHHHHHH-HHHHHHHHHHhhhchhhhHHH------------HH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTR----ALGRKASILVG-GVAFLAGSALGGAAFNVYMLI------------LG 94 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~d----r~GRr~~~~~~-~~~~~~~~~~~~~a~~~~~li------------~~ 94 (319)
.++.+.+.+.....+.+++..++.|+++| |+|||+.++.. .....++..+.+++++...+. +.
T Consensus 36 ~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~ 115 (477)
T TIGR01301 36 IPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAII 115 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHH
Confidence 35677788888888899999999999999 59999998876 444444445566665543221 13
Q ss_pred HHHHh-----hhhhhccchhhHHHHhcCCCCCC--cchhhHHHHHHHHHHHHHHHHHhhc------ccc----CCC--cc
Q 047275 95 RVLLG-----VGIGFSNQSVPLYLSEMAPPKHR--GAFNIGFQVCTAIGVLGANLLNYGT------QKI----KGG--WG 155 (319)
Q Consensus 95 R~l~G-----ig~g~~~~~~~~~i~e~~p~~~R--g~~~~~~~~~~~~G~~~~~~~~~~~------~~~----~~~--~g 155 (319)
+++.| ++.....++..++++|.+|+++| +...+..+....+|.+++..++... ... .+. .+
T Consensus 116 ~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~ 195 (477)
T TIGR01301 116 VFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCAN 195 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccch
Confidence 44444 47788888889999999998865 4667777777777777666655432 100 010 25
Q ss_pred hHHHHHhhHHHHHH-HHHhcccccCChh
Q 047275 156 WRISLSMAAAPASI-LTLGALILPDTPN 182 (319)
Q Consensus 156 Wr~~f~~~~~~~~~-~~~~~~~l~es~~ 182 (319)
-|..|.+.++..++ ..+..+..+|.|.
T Consensus 196 ~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 196 LKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 68889887776555 3344566888764
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.45 E-value=6.6e-13 Score=126.49 Aligned_cols=146 Identities=17% Similarity=0.058 Sum_probs=106.2
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc------hhhhHHHHHHHHHhhhhhhc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA------FNVYMLILGRVLLGVGIGFS 105 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a------~~~~~li~~R~l~Gig~g~~ 105 (319)
.+..+.+.+.+... ...++.++.|++.||+|||+++.++.+++.++.++++++ .+++.+++.|+++|+|.+..
T Consensus 59 ls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~ 137 (591)
T PTZ00207 59 LTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLF 137 (591)
T ss_pred cCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHH
Confidence 34455665554422 223466678999999999999999999999999999887 68999999999999999999
Q ss_pred cchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHH-HHHHHhhccccCCCcchHHHHHhhHHHHHH-HHHhccc--ccCCh
Q 047275 106 NQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLG-ANLLNYGTQKIKGGWGWRISLSMAAAPASI-LTLGALI--LPDTP 181 (319)
Q Consensus 106 ~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~--l~es~ 181 (319)
.+.....+.+|+| ++||++.++...+..+|..+ +.+...... .+|+..|++.++.+++ .++...+ .|++|
T Consensus 138 ~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-----~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~ 211 (591)
T PTZ00207 138 DLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-----DNTSAYFFFLMSFALVVGILAIVFMRLPPFH 211 (591)
T ss_pred HHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHHhheeCCcch
Confidence 8888899999997 78999999999888888643 433333322 2476666554544333 3333333 35555
Q ss_pred hhH
Q 047275 182 NSI 184 (319)
Q Consensus 182 ~~~ 184 (319)
++.
T Consensus 212 ~~~ 214 (591)
T PTZ00207 212 LTG 214 (591)
T ss_pred hhc
Confidence 544
No 98
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.45 E-value=2e-11 Score=107.16 Aligned_cols=253 Identities=19% Similarity=0.199 Sum_probs=176.2
Q ss_pred hhhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHH
Q 047275 13 FPEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLI 92 (319)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li 92 (319)
++|..+++.+|++.+ ....+.+++...+...+.+++..+++.|+|-++.+..++++..+|..+=... +...++
T Consensus 31 vgPLL~~Ir~~~gls------~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~ 103 (395)
T COG2807 31 VGPLLDEIRQDLGLS------FSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLF 103 (395)
T ss_pred hhhhHHHHHHHhccc------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHH
Confidence 467788888787754 5889999999999999999999999999999999999999999999886555 788899
Q ss_pred HHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH
Q 047275 93 LGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 93 ~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
.+-.+.|.|++......+..+-|.+|++. +..++.+.....+|...+..+...+.... .+||..+.+-.+++++.++
T Consensus 104 ~gt~l~G~gIav~nVLLPslIK~~Fpk~~-~~mtglYs~sl~~~aaLaa~lavpla~~~--~gW~~aL~~WAl~allAl~ 180 (395)
T COG2807 104 LGTLLAGAGIAVINVLLPSLIKRDFPKRV-GLMTGLYSTSLGAGAALAAALAVPLAQHS--GGWRGALGFWALLALLALL 180 (395)
T ss_pred HHHHHHHhhHHHHHHhhhHHHHhhcccch-hhHHhHHHHHHHHHHHHHhhhhhHHHHhh--ccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998654 66677777777776554444333222111 4799988887777766555
Q ss_pred hcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhh
Q 047275 173 GALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQL 252 (319)
Q Consensus 173 ~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 252 (319)
.| +|...|.. . ...+ +..++...++ +.+..+.....+-.+.
T Consensus 181 ~W--lPq~~r~~----~-~~~~----------------------------~~~~~~~~vw----~~~~aW~vtLfmGlqS 221 (395)
T COG2807 181 IW--LPQALREQ----A-ASIA----------------------------TKLVSVRKVW----RSPLAWQVTLFMGLQS 221 (395)
T ss_pred HH--hhhccccc----c-cccc----------------------------cccccccccc----cCchhHHHHHHHHhhH
Confidence 43 33322110 0 0000 0000111122 2222233333344445
Q ss_pred hhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhhHHh
Q 047275 253 TGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGR-KVLFLVGGILM 315 (319)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~g~~~~ 315 (319)
..+|.+..|+|.++.+.|.+..++- ....+......+.++....+.+|..- |+..+....++
T Consensus 222 ~~~Y~~~~WLP~ili~~G~sa~~aG-~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~ 284 (395)
T COG2807 222 LLYYIVIGWLPAILIDRGLSAAEAG-SLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLM 284 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhh-hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 5567778899999999998877655 44556678889999999999998644 55544444444
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.45 E-value=2.8e-11 Score=114.88 Aligned_cols=131 Identities=17% Similarity=0.164 Sum_probs=95.8
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhh-hchhHHHHHHHHHHHHHHHHhhhch-hhhHHHHHHHHHhhhhhhccchhh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRA-LGRKASILVGGVAFLAGSALGGAAF-NVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr-~GRr~~~~~~~~~~~~~~~~~~~a~-~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
+..+.....+.+........+++|+++|| +|||++++.+.+++.++..+++++. +.+.+.++|+++|+|.|...+...
T Consensus 55 s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~ 134 (500)
T PRK09584 55 SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPS 134 (500)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHH
Confidence 34444555555444444555789999999 5999999999999999998888874 566778899999999999999998
Q ss_pred HHHHhcCCCCC--CcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHH
Q 047275 111 LYLSEMAPPKH--RGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAP 166 (319)
Q Consensus 111 ~~i~e~~p~~~--Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~ 166 (319)
.++.|++|+++ |+...+..+.+..+|...+..+...+. +.+|||+.|.+.++.
T Consensus 135 ~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~---~~~g~~~~F~i~~i~ 189 (500)
T PRK09584 135 SLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA---AKYGWSVAFALSVVG 189 (500)
T ss_pred HHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH---HhhCHHHHHHHHHHH
Confidence 99999998654 333455566667777665554433222 246899999886643
No 100
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.38 E-value=1.4e-11 Score=116.34 Aligned_cols=249 Identities=14% Similarity=0.084 Sum_probs=137.6
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhh----hhch-hHHHHHHHHHHHHHHHHhhhch------hhhHHHHHHHHHhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTR----ALGR-KASILVGGVAFLAGSALGGAAF------NVYMLILGRVLLGV 100 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~d----r~GR-r~~~~~~~~~~~~~~~~~~~a~------~~~~li~~R~l~Gi 100 (319)
+++...+.+....-+--.+..++.|+++| |+|| |+.++++.....++..+.-..+ .+..+++.-++.++
T Consensus 39 ls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~ 118 (473)
T PRK10429 39 LSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGM 118 (473)
T ss_pred CCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHH
Confidence 45666666666666666788899999999 6799 4566667776666654443322 13456667777788
Q ss_pred hhhhccchhhHHHHhcC-CCCCCcchhhHHHHHHHHHH-HHHHHHHhh---ccccCCCcchHHHHHhhHHHHHH-HHHhc
Q 047275 101 GIGFSNQSVPLYLSEMA-PPKHRGAFNIGFQVCTAIGV-LGANLLNYG---TQKIKGGWGWRISLSMAAAPASI-LTLGA 174 (319)
Q Consensus 101 g~g~~~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~-~~~~~~~~~---~~~~~~~~gWr~~f~~~~~~~~~-~~~~~ 174 (319)
+......+-.++..|.+ ++++|.+..+.-..+..+|. +.+.+.... .+...+..+|+....+.++..++ ..+..
T Consensus 119 ~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~ 198 (473)
T PRK10429 119 TYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITL 198 (473)
T ss_pred HHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88888888889999998 68899986666445445442 222222211 11112224688776655554443 32334
Q ss_pred ccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcc-cchhHHHHHHHHHHHHhhh
Q 047275 175 LILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQR-KYRPQLVMAILIPFFQQLT 253 (319)
Q Consensus 175 ~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 253 (319)
+..+|.+.....+.+ ++.+.++++.++. .++|+.+..+...++.. .
T Consensus 199 ~~~~e~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~-~ 245 (473)
T PRK10429 199 RNVHEVYSSDNQVSA--------------------------------EGSHLTLKDIVALIYKNDQLSCLLGMALAYN-I 245 (473)
T ss_pred cCceecCCccccccc--------------------------------cccCCCHHHHHHHHhcCHHHHHHHHHHHHHH-H
Confidence 445664321000000 0001112222210 11233443333333332 2
Q ss_pred hhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHH
Q 047275 254 GINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGIL 314 (319)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~ 314 (319)
..+....+.+++++......+ .........++..+++.++.+++.||+|||+.++++..+
T Consensus 246 ~~~~~~~~~~y~~~y~~~~~~-~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~ 305 (473)
T PRK10429 246 ASNIINGFAIYYFTYVIGDAD-LFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIF 305 (473)
T ss_pred HHHHHhhheeeEEEEECCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 333433444555444332222 222334445567788889999999999999987655544
No 101
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.37 E-value=7.6e-12 Score=116.56 Aligned_cols=250 Identities=15% Similarity=0.216 Sum_probs=146.3
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhh----hhchhHHHH-HHHHHHHHHHHHhhhc-h-------hhhHHHHHHHHH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTR----ALGRKASIL-VGGVAFLAGSALGGAA-F-------NVYMLILGRVLL 98 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~d----r~GRr~~~~-~~~~~~~~~~~~~~~a-~-------~~~~li~~R~l~ 98 (319)
+++...+.+....-+-..+-.++.|.++| |+|||+-++ .+.....++..+.... + ....+.+.-++.
T Consensus 34 l~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~ 113 (428)
T PF13347_consen 34 LSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILF 113 (428)
T ss_pred CCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHH
Confidence 45555666555555556677789999999 899887544 5666666666655544 3 234467778888
Q ss_pred hhhhhhccchhhHHHHhcCC-CCCCcchhhHHHHHHHHHHH-HHHHHHhhccccCCC---cchHHHHHhhHHHHHHHHH-
Q 047275 99 GVGIGFSNQSVPLYLSEMAP-PKHRGAFNIGFQVCTAIGVL-GANLLNYGTQKIKGG---WGWRISLSMAAAPASILTL- 172 (319)
Q Consensus 99 Gig~g~~~~~~~~~i~e~~p-~~~Rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~---~gWr~~f~~~~~~~~~~~~- 172 (319)
.++......+..++..|.++ +++|.+..+.-..+..+|.+ ...+.........+. .+|++...+.++...+..+
T Consensus 114 ~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i 193 (428)
T PF13347_consen 114 DIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLI 193 (428)
T ss_pred HHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999997 57899887777777777764 233333222222111 3799988777666555443
Q ss_pred hcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhh
Q 047275 173 GALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQL 252 (319)
Q Consensus 173 ~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 252 (319)
.....+|.++.. +++. ...+.++.++++++. |+....+...++ ..
T Consensus 194 ~~~~~ke~~~~~------~~~~-------------------------~~~~~~~~~~~~~~n---r~~~~l~~~~~~-~~ 238 (428)
T PF13347_consen 194 TFFFVKERSVEV------TEQE-------------------------KKISLRDSLRSLFRN---RPFRILLLAFFL-QW 238 (428)
T ss_pred hhheeeeccccc------cccc-------------------------cccccccchhhhccc---chHHHHHHHHHH-HH
Confidence 445567721100 0000 000011223333332 223333333222 22
Q ss_pred hhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhh
Q 047275 253 TGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFV 317 (319)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~ 317 (319)
...+......+++.+..-..++... .......+..+++.++.++++||+|+|+....+..+..+
T Consensus 239 ~~~~~~~~~~~y~~~~vl~~~~~~~-~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTYVLGNEGLIS-IFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAAL 302 (428)
T ss_pred hhhhhhhhHHHHHHHHHhcCchhhH-HHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHH
Confidence 2333333444555544322222222 333455667788999999999999999988777766544
No 102
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.34 E-value=1.2e-10 Score=110.41 Aligned_cols=245 Identities=16% Similarity=0.188 Sum_probs=144.6
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh-----chhhhHHHHHHHHHhhhhhhccch
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA-----AFNVYMLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~-----a~~~~~li~~R~l~Gig~g~~~~~ 108 (319)
+...+.+....++-.++.++++|.++||+.||++++.+.++..+...+.++ ..+.+.+++.-++.|++.+...|.
T Consensus 44 ~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA 123 (524)
T PF05977_consen 44 PLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPA 123 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777788888899999999999999999999999887765544332 257889999999999999999999
Q ss_pred hhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhcc
Q 047275 109 VPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRS 188 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~ 188 (319)
-.+++.|..|+++-..+++..+....+..+++..++..+-. .+|=.+.|.+..+.-++..+....++..++. +
T Consensus 124 ~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva---~~G~~~~f~inalsfl~~i~~l~~~~~~~~~----~ 196 (524)
T PF05977_consen 124 WQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVA---FFGAAAAFLINALSFLISILALLRWKPPPPP----S 196 (524)
T ss_pred HHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHccccccc----c
Confidence 99999999999998877777776666554433322221110 1234456666554322222222222222110 0
Q ss_pred CChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHh
Q 047275 189 NGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRT 268 (319)
Q Consensus 189 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (319)
+ .+.+...+.+ ++.++-+.+.+..+..+ ...+...+. ...+...+|.+.++
T Consensus 197 ~--~~~e~~~~~l-----------------------~~G~ryv~~~~~l~~~l---~~~~~~~l~-~~a~~aLlPl~a~~ 247 (524)
T PF05977_consen 197 S--LPRERFFSAL-----------------------REGLRYVRSSPPLRSVL---LRSFLFNLF-ASAVWALLPLFARD 247 (524)
T ss_pred c--cchhhhhhhH-----------------------HHHHHHHhcchHHHHHH---HHHHHHHHh-hhHHHHhhhHHHHH
Confidence 0 0001110000 00011111111112111 111111111 12223346777654
Q ss_pred -cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 269 -IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
.+.+ ....++.....++..++|+++.+++.+|.+++++...+.+..
T Consensus 248 ~l~~~-a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~ 294 (524)
T PF05977_consen 248 VLGGG-ASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLF 294 (524)
T ss_pred HhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHH
Confidence 4444 344556666778888899999999999988887765555443
No 103
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.32 E-value=1.2e-11 Score=121.23 Aligned_cols=136 Identities=15% Similarity=-0.007 Sum_probs=110.5
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCC
Q 047275 41 TSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPK 120 (319)
Q Consensus 41 ~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~ 120 (319)
.....++.++|.++.|+++||+|||++++.+.++.+++.++.+++++...+++.+++.|++.++..+...++++|++|.+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~ 680 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSD 680 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 44556788999999999999999999999999999999988888888888999999999999999999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHH-hhccccCCCcchHHHHHhhHHHHHHHHHhcccccCCh
Q 047275 121 HRGAFNIGFQVCTAIGVLGANLLN-YGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTP 181 (319)
Q Consensus 121 ~Rg~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~ 181 (319)
.|++..++......+|.++++.+. .+.. .+...+|++.++..++..+...++||+.
T Consensus 681 ~Rgta~Gi~~~~~rlGaiigp~i~g~L~~-----~~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 681 KRATAFGFLNALCKAAAVLGILIFGSFVG-----ITKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999988888888888877666554 3322 1245677766666555555566778874
No 104
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=2.5e-10 Score=101.78 Aligned_cols=246 Identities=15% Similarity=0.160 Sum_probs=159.4
Q ss_pred ccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHh---hhchhhhHHHHHHHHHhhh
Q 047275 25 NVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALG---GAAFNVYMLILGRVLLGVG 101 (319)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~---~~a~~~~~li~~R~l~Gig 101 (319)
+..+..+.+..+.+.+...++.|..++++..+++.+|+|+|+.++.++.++.++..+. +...+|..++++-|+.|.|
T Consensus 38 ~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~G 117 (422)
T COG0738 38 HLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASG 117 (422)
T ss_pred HHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhh
Confidence 3444566778899999999999999999999999999999999999999999999886 4668999999999999999
Q ss_pred hhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-Hhhccc-----c----------CCCcchHHHHHhhHH
Q 047275 102 IGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQK-----I----------KGGWGWRISLSMAAA 165 (319)
Q Consensus 102 ~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~-----~----------~~~~gWr~~f~~~~~ 165 (319)
.|...+.+..|+....|+++........+.+.++|.+.+.++ ++++.. . ..--.|++++...+.
T Consensus 118 i~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~ 197 (422)
T COG0738 118 IGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAG 197 (422)
T ss_pred hHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 999999999999999999877766777777777776554433 222220 0 001247888776555
Q ss_pred HHHHHHHhccc--ccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHH
Q 047275 166 PASILTLGALI--LPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMA 243 (319)
Q Consensus 166 ~~~~~~~~~~~--l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 243 (319)
..+++.+.... .||.+..-. ++. +..+....++++. |+....
T Consensus 198 ~lvll~v~~~~~k~p~~~~~~~------~~~---------------------------~~~~~~~~~l~~~---~~~~~g 241 (422)
T COG0738 198 LLVLLAVLILLSKLPDLQVAAP------SLG---------------------------ASGSAGLSSLFQN---KHLRLG 241 (422)
T ss_pred HHHHHHHHHHhccCCcCCcccc------ccc---------------------------ccccchHHHHHhC---hHHHHH
Confidence 54444333322 233211000 000 0000022333332 333333
Q ss_pred HHHHHHHhhhhhhHhHhhhHHHHHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Q 047275 244 ILIPFFQQLTGINVISFYAPVLFRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLF 308 (319)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~ 308 (319)
....++.... -..+..|++.++.+ .+.+..+...... ..=...++|-.++.++..|+...+.+
T Consensus 242 vl~~FlYVG~-Eva~gsfl~~y~~~~~g~~~~~aa~~~s-~~~~~~~vGRFig~~lm~~~~~~k~L 305 (422)
T COG0738 242 VLAIFLYVGA-EVAIGSFLVSYLEELLGLNEQQAAYYLS-FFWVGFMVGRFIGSALMSRIKPEKYL 305 (422)
T ss_pred HHHHHHHHhH-HHHHHHHHHHHHHhcCCccHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 3333333333 23344556666555 4545544443333 33355678888888999999776654
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.31 E-value=4.8e-11 Score=111.76 Aligned_cols=148 Identities=11% Similarity=0.060 Sum_probs=94.7
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhh----hchhH-HHHHHHHHHHHHHHHhhhchh------hhHHHHHHHHHhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRA----LGRKA-SILVGGVAFLAGSALGGAAFN------VYMLILGRVLLGV 100 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr----~GRr~-~~~~~~~~~~~~~~~~~~a~~------~~~li~~R~l~Gi 100 (319)
+++...+.+....-+.-.+..++.|+++|| +|||+ .++++...+.+...+....++ ...+++.-++.+.
T Consensus 42 ls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~ 121 (444)
T PRK09669 42 LSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSL 121 (444)
T ss_pred CCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHH
Confidence 456777777777777788999999999998 88854 555666666666555444432 4566777777787
Q ss_pred hhhhccchhhHHHHhcC-CCCCCcchhhHHHHHHHHHHHHHH-----HHHhhccccCCCcchHHHHHhhHHHHHHHHH-h
Q 047275 101 GIGFSNQSVPLYLSEMA-PPKHRGAFNIGFQVCTAIGVLGAN-----LLNYGTQKIKGGWGWRISLSMAAAPASILTL-G 173 (319)
Q Consensus 101 g~g~~~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~~~~~-----~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~ 173 (319)
+......+-.++.+|++ ++++|++..+....+..+|..++. +.... ..-....+|+..+.+.++.+.+..+ .
T Consensus 122 ~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~-~~~~~~~g~~~~~~i~~ii~~v~~~~~ 200 (444)
T PRK09669 122 VYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDIL-GKGDEQKGYFYAMMVMGLLGVVLFFCC 200 (444)
T ss_pred HHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence 77777777788999998 568898765555555555533332 22221 1111235899887766655444333 3
Q ss_pred cccccCC
Q 047275 174 ALILPDT 180 (319)
Q Consensus 174 ~~~l~es 180 (319)
.+..+|.
T Consensus 201 ~~~~~e~ 207 (444)
T PRK09669 201 FFMTKER 207 (444)
T ss_pred hCCeEEe
Confidence 3344443
No 106
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.30 E-value=2.2e-11 Score=113.10 Aligned_cols=148 Identities=18% Similarity=0.234 Sum_probs=109.6
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc-h---hhhHHHHHHHHHhhhhhhccchhh
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA-F---NVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a-~---~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
.+.+...+...++..++.++.|++.||+|||+++..+.++..++..+...+ . +++.+++.+++.|++.+...+...
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444666677777888889999999999999999999999888876655543 2 346778899999999999989989
Q ss_pred HHHHhcCCCCCCcchhhHHH-HHHHHHHHHHHHHH-hhcccc--CCCcchHHHHHhhHHHHHH-HHHhcccccCChh
Q 047275 111 LYLSEMAPPKHRGAFNIGFQ-VCTAIGVLGANLLN-YGTQKI--KGGWGWRISLSMAAAPASI-LTLGALILPDTPN 182 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~-~~~~~G~~~~~~~~-~~~~~~--~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es~~ 182 (319)
.+++|.+|+++||+..+..+ ....+|...+..++ +..+.. .+.+||+..|.+.++..++ ..+..++++|+.+
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999999999999888875 45666765554443 333322 1126899988776665444 3344556777743
No 107
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.24 E-value=2.7e-10 Score=107.32 Aligned_cols=261 Identities=13% Similarity=0.005 Sum_probs=140.0
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhc-----hhHHHHHHHHHHH-HHHHHhhhchhhh-HHHHHHHHHhhhhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALG-----RKASILVGGVAFL-AGSALGGAAFNVY-MLILGRVLLGVGIGF 104 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~G-----Rr~~~~~~~~~~~-~~~~~~~~a~~~~-~li~~R~l~Gig~g~ 104 (319)
+++.+.+.+.+...+...+-.+ +|+++||++ ||+.++++.++.. +.....+..++.. ...+.+++.+++.+.
T Consensus 58 ~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~ 136 (468)
T TIGR00788 58 LDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKAL 136 (468)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 4556777777777777777665 999999998 7777777766652 3322233334544 444589999999999
Q ss_pred ccchhhHHHHhcCCCCCCcchhhHHHHHHH---HHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCCh
Q 047275 105 SNQSVPLYLSEMAPPKHRGAFNIGFQVCTA---IGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTP 181 (319)
Q Consensus 105 ~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~---~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~ 181 (319)
.-..+-.+..|..+ ++++..+...+..+. +|.+++..++... .+.++||..|.+.+...++..+...++||++
T Consensus 137 ~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l---~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 137 YDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPL---LDKTLTRILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred HHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH---HHhcCcchHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999998 555543333333332 4554443333221 1235899999876665555555566778864
Q ss_pred hhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHH--HhhhhhhHhH
Q 047275 182 NSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFF--QQLTGINVIS 259 (319)
Q Consensus 182 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 259 (319)
+....+. .++......... ....... ++.++++.+..+++.......+.++ ....+. ...
T Consensus 213 ~~~~~~~--~~~~~~~~~~~~--~~~~~~~-------------~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~-~~~ 274 (468)
T TIGR00788 213 AFVRPRI--GTYLEMNMALLT--LGVLANV-------------KVQILGLRGAIQLLEIAKPLIFIFLSYANLPGA-SGS 274 (468)
T ss_pred ccccccc--cccchhhhhhhh--hhHHHHH-------------HHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCC-Cce
Confidence 2100000 000000000000 0000000 0001111111112333222222222 111111 111
Q ss_pred hhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhh
Q 047275 260 FYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFV 317 (319)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~ 317 (319)
++. +..+..+.+... .+......++..+++....+++.+|++.|+++.++.++..+
T Consensus 275 ~f~-~~~~~lG~s~~~-~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~ 330 (468)
T TIGR00788 275 VFC-ATTQCLPGGPSF-SGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTL 330 (468)
T ss_pred eEE-EEcccCCCCcch-hhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 111 111234555443 44555567788899999999999999999988877766554
No 108
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.20 E-value=4.4e-09 Score=96.81 Aligned_cols=246 Identities=13% Similarity=0.122 Sum_probs=143.7
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhc-hhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALG-RKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~G-Rr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
+++.+.+.+.+...+...++++++|.++||.+ +|+.+.+..+...+.........+++.+.+.-++..+...+..|..-
T Consensus 34 ~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~d 113 (400)
T PF03825_consen 34 FSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSD 113 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHH
Confidence 56788999999999999999999999999986 56677666666666556666778888888888888888888888888
Q ss_pred HHHHhcCCCCCC--cchhhHHHHHHHHHHHH-HH-HHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHh
Q 047275 111 LYLSEMAPPKHR--GAFNIGFQVCTAIGVLG-AN-LLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQ 186 (319)
Q Consensus 111 ~~i~e~~p~~~R--g~~~~~~~~~~~~G~~~-~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~ 186 (319)
++..+...++++ |+...-=++++.++... +. +.+. .+..+..+.+++......+.....+.+|+.|+....
T Consensus 114 si~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~ 188 (400)
T PF03825_consen 114 SIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGY-----LGISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSA 188 (400)
T ss_pred HHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhh-----hccccccHHHHHHHHHHHHHHHHHHhCCCCcccccc
Confidence 888888764332 22222222333333221 11 1111 111122234444444333333344567887631100
Q ss_pred ccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHH
Q 047275 187 RSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLF 266 (319)
Q Consensus 187 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (319)
+ ++. ++.. .+....+++ +|+....+...++.+.+ ...+..|.+.++
T Consensus 189 ~----~~~----~~~~----------------------~~~~~~llk---~~~~~~Fll~~~l~~~~-~~~~~~f~~~yl 234 (400)
T PF03825_consen 189 K----ESV----KKLL----------------------GLDALKLLK---NPRFLVFLLAAFLIGIS-HAAYYTFFSIYL 234 (400)
T ss_pred C----CCc----cccc----------------------chHHHHHhc---CccHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 0 000 0000 000011221 23333333343333332 334445666677
Q ss_pred HhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 267 RTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
++.+..+.........+..+.+++.....+++..|+|.|++++++.++.+
T Consensus 235 ~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~ 284 (400)
T PF03825_consen 235 QELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYA 284 (400)
T ss_pred HHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 77774322333333345667899999999999999999999888877654
No 109
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.19 E-value=4.4e-10 Score=103.53 Aligned_cols=143 Identities=17% Similarity=0.129 Sum_probs=103.7
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+..+.+.+.+...++.+++.++.|+++||+|||+.+..+.....+.......+++.+.+++.|++.+++.|...+....+
T Consensus 250 ~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~ 329 (393)
T PRK15011 250 PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLY 329 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666565566678899999999999999998887766555544444556788888899999999988888888888
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPD 179 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~e 179 (319)
..|..|+ +||...+..+....+|...+..+...+ .+.+||+..|.+..++.++..+..+++||
T Consensus 330 ~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 330 FQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIV---AEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8999885 588877777666667665555443322 22368999988877776665555555554
No 110
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.19 E-value=1.8e-10 Score=107.00 Aligned_cols=143 Identities=13% Similarity=0.155 Sum_probs=106.2
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLS 114 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~ 114 (319)
.+.+.+.+...++..++.++.|++.||+|||+.+..+.++..++..+.+++++.+.+++.+++.|++.+...+....++.
T Consensus 262 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 341 (420)
T PRK09528 262 RVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYIT 341 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666677777899999999999999999999999988888888888999999999999999999888888888999
Q ss_pred hcCCCCCCcchhhH-HHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHH-HHHhcccccCCh
Q 047275 115 EMAPPKHRGAFNIG-FQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASI-LTLGALILPDTP 181 (319)
Q Consensus 115 e~~p~~~Rg~~~~~-~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es~ 181 (319)
|..|++.|+...+. .+....+|..++. +.++.. +.+|||..|.+.++..++ ..+....+++.+
T Consensus 342 ~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~----~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 342 LNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLY----DSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHH----HhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999865332 4444555554433 333322 346899998876555444 333344445443
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.18 E-value=1.2e-09 Score=102.35 Aligned_cols=101 Identities=18% Similarity=0.180 Sum_probs=68.5
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhh----chhHHH-HHHHHHHHHHHHHhh-----hch--hhhHHHHHHHHHh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRAL----GRKASI-LVGGVAFLAGSALGG-----AAF--NVYMLILGRVLLG 99 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~----GRr~~~-~~~~~~~~~~~~~~~-----~a~--~~~~li~~R~l~G 99 (319)
++..+.+.+.....+...+..++.|+++||. |||+.+ +++.+...+...+.. ... ....+++.-++.+
T Consensus 41 l~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (448)
T PRK09848 41 VGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLG 120 (448)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHH
Confidence 4567788888888888899999999999996 777755 445444444333321 111 2233455667788
Q ss_pred hhhhhccchhhHHHHhcCC-CCCCcchhhHHHHH
Q 047275 100 VGIGFSNQSVPLYLSEMAP-PKHRGAFNIGFQVC 132 (319)
Q Consensus 100 ig~g~~~~~~~~~i~e~~p-~~~Rg~~~~~~~~~ 132 (319)
++.+...++..++..|..+ +++|....+.-..+
T Consensus 121 ~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~ 154 (448)
T PRK09848 121 LCYSLVNIPYGSLATAMTQQPQSRARLGAARGIA 154 (448)
T ss_pred HHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHH
Confidence 8888888888788888775 46788765554443
No 112
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.18 E-value=3.8e-10 Score=101.23 Aligned_cols=140 Identities=25% Similarity=0.287 Sum_probs=117.9
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhH-HHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKA-SILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~-~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
++.+.+.......++..++.++.+++.||+|||+ .+..+.....++.+.....++.+.+.+..++.|++.+...+....
T Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 288 (352)
T cd06174 209 SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLT 288 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHH
Confidence 4567778888899999999999999999999999 999999999999998888888999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcc
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGAL 175 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~ 175 (319)
++.|..|+++|++..+.......+|...+..+.... .+..+|+..+.+.++..++..+...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l---~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 289 LASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL---LDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999998888888888866555443322 2246899998887777666544433
No 113
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.13 E-value=6.2e-10 Score=102.56 Aligned_cols=137 Identities=19% Similarity=0.143 Sum_probs=106.6
Q ss_pred HHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 39 TFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 39 ~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
...+...++..++.++.|++.||+|||+.+..+..+..++..+....++.+.+++.+++.|++.++..+.....+.|..|
T Consensus 253 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~ 332 (399)
T PRK05122 253 LALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVP 332 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCC
Confidence 34455667778899999999999999999999888888888777778888889999999999999998888888899999
Q ss_pred CCCCcchhhHHHHHHHHHHH-HHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 047275 119 PKHRGAFNIGFQVCTAIGVL-GANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPD 179 (319)
Q Consensus 119 ~~~Rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~e 179 (319)
+++||+..+.......+|.. .+.+.+... +.+||+..+.+.++..++..+..+.+++
T Consensus 333 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 333 PQNRGAALGAYSVFLDLSLGITGPLAGLVA----SWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999988888777777754 334444433 2368999988777665555444444443
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.12 E-value=2e-09 Score=95.90 Aligned_cols=196 Identities=11% Similarity=0.073 Sum_probs=118.7
Q ss_pred hhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHh-hccccC----------
Q 047275 83 GAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNY-GTQKIK---------- 151 (319)
Q Consensus 83 ~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~-~~~~~~---------- 151 (319)
+...+|..++++=|+.|.|.+...+....|+++..|++++++..+..+.++++|.++++++.. .+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 345789999999999999999999999999999999999999888999999988776665543 221100
Q ss_pred --CCcchHHHHHhhHHHHHHHHHh--cccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccc
Q 047275 152 --GGWGWRISLSMAAAPASILTLG--ALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHP 227 (319)
Q Consensus 152 --~~~gWr~~f~~~~~~~~~~~~~--~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (319)
+.+.||+++.+.+....+..+. +.-+||... +++++.. .++. ..
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~~~~-------~~~~-------------------~~ 132 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVARVS-------SGDT-------------------TQ 132 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------ccccccc-------cccc-------------------cc
Confidence 1157999988544433332222 223455321 1000000 0000 00
Q ss_pred hhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhc---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 047275 228 FQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTI---KLSESTSLLMSAVVTGGVSTIATITSMILTDKLGR 304 (319)
Q Consensus 228 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr 304 (319)
.+.+. ++++.... .+..+.....-..+..|.+.++++. +.+..... ..........++|.++++++.||+|+
T Consensus 133 ~~~~~---~~~~~~l~-~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~-~~~s~~~~~~~iGr~~~~~l~~r~g~ 207 (310)
T TIGR01272 133 KTSAF---QFTHLVLG-ALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAA-HFTAYTWGGAMVGRFIGSAVMPMISQ 207 (310)
T ss_pred hhhHH---hhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 00011 12333333 3333333333445556777777643 55544433 33445556677999999999999999
Q ss_pred chHHHHhhHHh
Q 047275 305 KVLFLVGGILM 315 (319)
Q Consensus 305 r~~~~~g~~~~ 315 (319)
|+++.++..++
T Consensus 208 ~~~l~~~~~l~ 218 (310)
T TIGR01272 208 GRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHH
Confidence 88776655444
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.10 E-value=6.7e-08 Score=90.86 Aligned_cols=248 Identities=22% Similarity=0.216 Sum_probs=141.4
Q ss_pred hHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHH-HHHHHhhh-c-hhhhHHHHHHHHHhhhhhhccchhhHHHH
Q 047275 38 TTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFL-AGSALGGA-A-FNVYMLILGRVLLGVGIGFSNQSVPLYLS 114 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~-~~~~~~~~-a-~~~~~li~~R~l~Gig~g~~~~~~~~~i~ 114 (319)
....+...+-..+-.++.|-++|+-|+||-++....... +.+.+..+ . .+++...+.-++.-++-+.......+++.
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP 152 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLP 152 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 345566677777888999999999998876665444333 33444333 2 33444445555556677777888888999
Q ss_pred hcCCCCCC--------------------------cchhhHHHHHHHHHHHHHHHHHhhc-ccc----CCCcchHHHHHhh
Q 047275 115 EMAPPKHR--------------------------GAFNIGFQVCTAIGVLGANLLNYGT-QKI----KGGWGWRISLSMA 163 (319)
Q Consensus 115 e~~p~~~R--------------------------g~~~~~~~~~~~~G~~~~~~~~~~~-~~~----~~~~gWr~~f~~~ 163 (319)
|.++++++ ++.++.-.....+|.++..++.... ... .+.+.-|..+.+.
T Consensus 153 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~ 232 (477)
T PF11700_consen 153 DLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIV 232 (477)
T ss_pred hhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHH
Confidence 99998888 7754333222223332222222221 111 1234568877776
Q ss_pred HHHHHHHH-HhcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHH
Q 047275 164 AAPASILT-LGALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVM 242 (319)
Q Consensus 164 ~~~~~~~~-~~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 242 (319)
++.-+++. ...+++||.|+....+.. ..-.....+++ .+.++++ ++.|++ .
T Consensus 233 a~ww~vfsiP~~~~~~~~~~~~~~~~~-~~~~~~g~~~l-----------------------~~t~k~~---~~~~~~-~ 284 (477)
T PF11700_consen 233 ALWWLVFSIPLFLWLPDRPGPRPLPSG-SSYLRFGFKRL-----------------------WRTFKEI---RKLRQL-F 284 (477)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcc-hhHHHHHHHHH-----------------------HHHHHHH---HhChHH-H
Confidence 66544433 345677887653111100 00011111111 0111111 112333 3
Q ss_pred HHHHHHHHhhhhhhHhHhhhHHHHH-hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--hHHHHhhHH
Q 047275 243 AILIPFFQQLTGINVISFYAPVLFR-TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRK--VLFLVGGIL 314 (319)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~~g~~~ 314 (319)
.++++++....+++++......+.+ +.+++..+ .....++..+.+++|+++.+++.||+|.| +.++++...
T Consensus 285 ~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~-l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 285 LFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQ-LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLIL 358 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 4555555555667777666666655 67777554 44667777889999999999999999999 665444433
No 116
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.09 E-value=1.7e-09 Score=101.59 Aligned_cols=132 Identities=15% Similarity=0.256 Sum_probs=93.7
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhh-chhHHHHHHHHHHHHHHHHhhhch-hhhHHHHHHHHHhhhhhhccchh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRAL-GRKASILVGGVAFLAGSALGGAAF-NVYMLILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~-GRr~~~~~~~~~~~~~~~~~~~a~-~~~~li~~R~l~Gig~g~~~~~~ 109 (319)
++..+.+.+.+.+.....++++++|+++||+ |||++++++.++..++..+.+... +...+.++-.+.++|.|...+..
T Consensus 42 ls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~ 121 (493)
T PRK15462 42 YDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNV 121 (493)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccH
Confidence 3456667777777788889999999999999 999999999999999887665432 22334444445556667777777
Q ss_pred hHHHHhcCCCC--CCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHH
Q 047275 110 PLYLSEMAPPK--HRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAP 166 (319)
Q Consensus 110 ~~~i~e~~p~~--~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~ 166 (319)
.++++|.+|++ +|+...+.......+|...+..+...+ .+.+|||+.|.+.++.
T Consensus 122 ~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L---~~~~Gw~~~F~iaaig 177 (493)
T PRK15462 122 SCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA---QEEYSWAMGFGLAAVG 177 (493)
T ss_pred HHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH---HhhhChHHHHHHHHHH
Confidence 88999999875 677666666666666655444433222 2246899999876543
No 117
>PRK11462 putative transporter; Provisional
Probab=99.08 E-value=1.5e-08 Score=95.41 Aligned_cols=149 Identities=11% Similarity=0.052 Sum_probs=90.2
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhh----hchhHHHH-HHHHHHHHHHHHhhhchh------hhHHHHHHHHHhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRA----LGRKASIL-VGGVAFLAGSALGGAAFN------VYMLILGRVLLGV 100 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr----~GRr~~~~-~~~~~~~~~~~~~~~a~~------~~~li~~R~l~Gi 100 (319)
+++...+.+....-+--.+..++.|+++|| +|||+.++ ++...+.++..+.-..++ ...+.+.-++..+
T Consensus 42 l~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~ 121 (460)
T PRK11462 42 IPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTL 121 (460)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHH
Confidence 344444444444444445777889999995 79986554 455666666555433332 3456666677788
Q ss_pred hhhhccchhhHHHHhcCC-CCCCcchhhHHHHHHHHHHHHHHHHH-hhcccc---CCCcchHHHHHhhHHHHHHHH-Hhc
Q 047275 101 GIGFSNQSVPLYLSEMAP-PKHRGAFNIGFQVCTAIGVLGANLLN-YGTQKI---KGGWGWRISLSMAAAPASILT-LGA 174 (319)
Q Consensus 101 g~g~~~~~~~~~i~e~~p-~~~Rg~~~~~~~~~~~~G~~~~~~~~-~~~~~~---~~~~gWr~~f~~~~~~~~~~~-~~~ 174 (319)
+......+-.++..|.++ +++|+...+....+..+|..+..++. ...... ....+|+....+.+++.++.. +..
T Consensus 122 ~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~ 201 (460)
T PRK11462 122 LYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCF 201 (460)
T ss_pred HHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 888888888899999986 78899888777777777644333221 111111 112478876665555444333 233
Q ss_pred ccccCC
Q 047275 175 LILPDT 180 (319)
Q Consensus 175 ~~l~es 180 (319)
...+|.
T Consensus 202 ~~~kE~ 207 (460)
T PRK11462 202 FTTKER 207 (460)
T ss_pred hcceec
Confidence 334443
No 118
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.07 E-value=1.4e-09 Score=98.67 Aligned_cols=133 Identities=14% Similarity=0.035 Sum_probs=103.5
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhh--hHHHHHHHHHhhhhhhccchhhH
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNV--YMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~--~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
....+.+.+...++..++.++.|++.||+|||+.+..+.....++.++..+.++. ..+++..++.|++.|...+..+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 318 (377)
T TIGR00890 239 DGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPS 318 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHH
Confidence 4455667777888889999999999999999999999988888887776666543 34557788999999988888889
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~ 169 (319)
++.|.+|+++|++..+.......+|...+..+.... .+..||+..|.+.++..++
T Consensus 319 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l---~~~~g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 319 LVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHA---LTEIGFEYTFIVTGAFALT 373 (377)
T ss_pred HHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH---HhhhchhhHHHHHHHHHHH
Confidence 999999999999988888888888766555443222 2346899998876665443
No 119
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.03 E-value=2.7e-09 Score=98.39 Aligned_cols=131 Identities=17% Similarity=0.121 Sum_probs=102.6
Q ss_pred HHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 39 TFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 39 ~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
.+.+...++..++.++.|++.||+|||+.+..+.....++.+.....++.+.+++.+++.|++.|...+....++.|..|
T Consensus 262 ~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 341 (408)
T PRK09874 262 MIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSS 341 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCC
Confidence 34445566778888899999999999999999888877777777777888889999999999999999999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH
Q 047275 119 PKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 119 ~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
+++||+..+.......+|...+..+...+ .+.+||+..|.+.+...++..+
T Consensus 342 ~~~~g~~~~~~~~~~~~g~~~gp~~~G~l---~~~~g~~~~f~~~~~~~l~~~~ 392 (408)
T PRK09874 342 NQIAGRIFSYNQSFRDIGNVTGPLMGAAI---SANYGFRAVFLVTAGVVLFNAV 392 (408)
T ss_pred cccceeeehHHHHHHHHHHHhhHHHHHHH---HhhcchhHHHHHHHHHHHHHHH
Confidence 99999987777776777765555443322 2346899999877765555333
No 120
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.03 E-value=4.4e-09 Score=95.79 Aligned_cols=142 Identities=16% Similarity=0.195 Sum_probs=100.5
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
++.+.+...........++.++.|++.||+|||+.+..+.+...+........++.+.+.+.+++.|++.|...+....+
T Consensus 233 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~ 312 (375)
T TIGR00899 233 PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLY 312 (375)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555567788899999999999999888777655555555566788888899999999999988888889
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-HhhccccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQKIKGGWGWRISLSMAAAPASILTLGALILPD 179 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~e 179 (319)
+.|..|++ |+...+.......+|...+..+ +... +.+||+..|.+.++..++..+...+++|
T Consensus 313 ~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 313 FQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILA----ERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHH----HhccchhHHHHHHHHHHHHHHHHheecC
Confidence 99988764 5676777666666665554433 3322 2357999888877766555554444443
No 121
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.02 E-value=8.1e-09 Score=97.46 Aligned_cols=143 Identities=17% Similarity=0.114 Sum_probs=91.2
Q ss_pred HHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhch--hh-h-HHHHHHHHHhhhhhhc-cchhhHHH
Q 047275 39 TFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAF--NV-Y-MLILGRVLLGVGIGFS-NQSVPLYL 113 (319)
Q Consensus 39 ~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~--~~-~-~li~~R~l~Gig~g~~-~~~~~~~i 113 (319)
.......+...++.++.+++.||+|||+.++.+..+..++.++.+... +. . ....+-++.+.+.+.. .+....++
T Consensus 310 ~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (479)
T PRK10077 310 LQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLL 389 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHh
Confidence 333444556678999999999999999999999998888776654321 11 1 2223334444444432 35678899
Q ss_pred HhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhhc--cccCCCcchHHHHHhhHHHHHHHHH-hcccccCCh
Q 047275 114 SEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYGT--QKIKGGWGWRISLSMAAAPASILTL-GALILPDTP 181 (319)
Q Consensus 114 ~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~--~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~es~ 181 (319)
+|.+|+++|+...+.......+|...+. +.+... ....+.++|++.|.+.++.+++..+ .+++.||+.
T Consensus 390 ~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 390 SEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred HhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCC
Confidence 9999999999988877766666654432 222211 1223457888888776655444333 344567763
No 122
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.00 E-value=4.8e-08 Score=86.56 Aligned_cols=84 Identities=20% Similarity=0.286 Sum_probs=69.1
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
++..+.+.+-..-+...++.+.+.|.++||+|||+.-+.-.++..++.+. -..+++..|+++|++.|++.....+.-=+
T Consensus 66 ~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS~FEs 144 (354)
T PF05631_consen 66 FSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFSAFES 144 (354)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666666677777888889999999999999999888888888864 45689999999999999999988887755
Q ss_pred -HHHhc
Q 047275 112 -YLSEM 116 (319)
Q Consensus 112 -~i~e~ 116 (319)
++.|.
T Consensus 145 W~V~Eh 150 (354)
T PF05631_consen 145 WMVHEH 150 (354)
T ss_pred HHHHHH
Confidence 56776
No 123
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.99 E-value=6.8e-09 Score=95.85 Aligned_cols=138 Identities=15% Similarity=0.058 Sum_probs=102.3
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+....+.+.+...++..++.++.|++.||+|||+.+..+.+...++..+....++.+.+.+.-++.|++.++..+....+
T Consensus 253 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 332 (406)
T PRK11551 253 SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYAL 332 (406)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 44566677777788899999999999999999999888777666666666667778888888899999988888888999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-HhhccccCCCcchHHHHHhhHHHHHHHHHh
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQKIKGGWGWRISLSMAAAPASILTLG 173 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~ 173 (319)
+.|.+|+++||+..+.......+|...+..+ ++..+. ..+|...+.......++..+.
T Consensus 333 ~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~---~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 333 APLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL---GRSTVGVIGASIPVILVAALA 391 (406)
T ss_pred HHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc---CCchHHHHHHHHHHHHHHHHH
Confidence 9999999999998888877777776555544 333221 135666665544444333333
No 124
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.98 E-value=2.4e-08 Score=92.09 Aligned_cols=236 Identities=17% Similarity=0.141 Sum_probs=140.6
Q ss_pred HHHHhhhhhhhhh----hchhH-HHHHHHHHHHHHHHHhhhch------hhhHHHHHHHHHhhhhhhccchhhHHHHhcC
Q 047275 49 LIASLFASKVTRA----LGRKA-SILVGGVAFLAGSALGGAAF------NVYMLILGRVLLGVGIGFSNQSVPLYLSEMA 117 (319)
Q Consensus 49 ~ig~~~~g~l~dr----~GRr~-~~~~~~~~~~~~~~~~~~a~------~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~ 117 (319)
++..++.|.+.|| +||+| -++++.+.+.+...++-.++ +....++.-++.|++-.....+-.++..|++
T Consensus 62 Ai~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT 141 (467)
T COG2211 62 AITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEIT 141 (467)
T ss_pred HHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhc
Confidence 4566778888884 88875 56667688888888776665 3456778889999999999999999999998
Q ss_pred -CCCCCcchhhHHHHHHHHHHHHHH-HHHhhc---cccCCCcchHHHHHhhHHHHHHHH-HhcccccCChhhHHhccCCh
Q 047275 118 -PPKHRGAFNIGFQVCTAIGVLGAN-LLNYGT---QKIKGGWGWRISLSMAAAPASILT-LGALILPDTPNSIIQRSNGH 191 (319)
Q Consensus 118 -p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~---~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~es~~~~~~~~~~~ 191 (319)
+++||....+.-+.+..+|.++.. +..... ..-+..+||+..-.+.++.+++.. ..++..+|.+...... +
T Consensus 142 ~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~---~ 218 (467)
T COG2211 142 QDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPT---K 218 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccC---c
Confidence 478899888777777777744332 222222 222225789887766555544433 3344455544311000 0
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhc-ccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcC
Q 047275 192 EKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQ-RKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIK 270 (319)
Q Consensus 192 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (319)
.+.+.++++.+. -.++|+.+..+. ..+...++.+.......++.+..-
T Consensus 219 ------------------------------~~~~~~~~~~~~~~~~Nrp~~~~l~-~~l~~~~~~~i~~s~~~yy~~y~l 267 (467)
T COG2211 219 ------------------------------TGVKLKLKDSFLLIFKNRPLLLLLL-MNLLLFIAFNIRGSIMVYYVTYVL 267 (467)
T ss_pred ------------------------------ccccccHHHHHHHHHccchHHHHHH-HHHHHHHHHHHHhhhhheeEEEEc
Confidence 001222222221 122333333332 344444444444444444443322
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhhc
Q 047275 271 LSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFVS 318 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~~ 318 (319)
...+..........+...+++.++...+.+|+|+|++...+.++.+++
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVG 315 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHH
Confidence 222333334455555666677899999999999999988887665543
No 125
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.97 E-value=8.3e-11 Score=111.88 Aligned_cols=267 Identities=16% Similarity=0.206 Sum_probs=3.0
Q ss_pred ccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc----h------------------
Q 047275 29 YCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA----F------------------ 86 (319)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a----~------------------ 86 (319)
-+++++.+.+.+.+.+=++..+..++..++++|..|-+.+-.+.+++++++++.++= .
T Consensus 32 RF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~ 111 (539)
T PF03137_consen 32 RFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISS 111 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccc
Confidence 345678999999999999999999999999999777788888888888887765430 0
Q ss_pred ----------------------------hhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHH
Q 047275 87 ----------------------------NVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVL 138 (319)
Q Consensus 87 ----------------------------~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~ 138 (319)
-+..++++.++.|+|..+.++...+|+-|.+++++-+.+.++......+|..
T Consensus 112 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa 191 (539)
T PF03137_consen 112 NLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPA 191 (539)
T ss_dssp ----------------------------------------SSS-------------------------------------
T ss_pred ccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHH
Confidence 1357889999999999999999999999999999999888888777777766
Q ss_pred HHHHHHhhc-----c--cc----------CCCc-c-hHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHHHHHHHH
Q 047275 139 GANLLNYGT-----Q--KI----------KGGW-G-WRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEKAKKMLQ 199 (319)
Q Consensus 139 ~~~~~~~~~-----~--~~----------~~~~-g-Wr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~a~~~~~ 199 (319)
++.+++... + .. ++.| | |..-|++.+...++..+-.+..|++-+..... +++.+...+
T Consensus 192 ~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~---~~~~~~~~~ 268 (539)
T PF03137_consen 192 LGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSER---QEEKESSER 268 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccc---cchhhhhhc
Confidence 665554321 1 00 1112 2 66667777766655555555666654322100 010100000
Q ss_pred HHcCChhHHHHHHHHHHHHhhccccccchhhhh---cccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHH-hcCCCchh
Q 047275 200 RVRGTADVQAELDDLIRASIVSRTVKHPFQTII---QRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFR-TIKLSEST 275 (319)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 275 (319)
+... .+. ++. +.........+.++|++ ++..++++.+....+..........+..+.|=++| +++.+...
T Consensus 269 ~~~~-~~~-~~~----~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~ 342 (539)
T PF03137_consen 269 KEED-SDK-DSF----KDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ 342 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhh-hhh-hcc----cccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 0000 000 000 00000001122333333 22234455555666666666667777788887765 56666544
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 047275 276 SLLMSAVVTGGVSTIATITSMILTDKLGR 304 (319)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr 304 (319)
+..+...+.--...+|.+++|++++|+.-
T Consensus 343 A~~l~G~v~ip~~~~G~llGG~ivkk~kl 371 (539)
T PF03137_consen 343 ASLLTGIVSIPGAALGILLGGYIVKKFKL 371 (539)
T ss_dssp -----------------------------
T ss_pred HHHHHhhhhcchhheehheEEEEEEEecC
Confidence 44333333333456889999999999854
No 126
>PRK12382 putative transporter; Provisional
Probab=98.97 E-value=5.1e-09 Score=96.29 Aligned_cols=128 Identities=14% Similarity=0.084 Sum_probs=101.6
Q ss_pred HhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCC
Q 047275 40 FTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPP 119 (319)
Q Consensus 40 ~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~ 119 (319)
......++..++.++.|++.||+|||+.+..+..+..++..+....++.+.+.+.+++.|++.+...+.....+.|..|+
T Consensus 254 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 333 (392)
T PRK12382 254 TLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPS 333 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH
Confidence 33445566788999999999999999999999888888887777888888889999999999999888888889999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHH-HHhhccccCCCcchHHHHHhhHHHHHHHH
Q 047275 120 KHRGAFNIGFQVCTAIGVLGANL-LNYGTQKIKGGWGWRISLSMAAAPASILT 171 (319)
Q Consensus 120 ~~Rg~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 171 (319)
++||+..+..+....+|...+.. .++.. ++.||+..|.+.+...++..
T Consensus 334 ~~~g~~~g~~~~~~~~g~~ig~~~~g~l~----~~~g~~~~~~~~~~~~~~~~ 382 (392)
T PRK12382 334 QVRGTALGGYAAFQDIAYGVSGPLAGMLA----TSFGYPSVFLAGAISAVLGI 382 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCchHHHHHHHHHHHHHH
Confidence 99999888887777777554443 33332 23589999887766555433
No 127
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.92 E-value=1.5e-08 Score=95.51 Aligned_cols=139 Identities=15% Similarity=0.028 Sum_probs=92.4
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHH--hhhchhhhHHHHHHHHHhhhhhhccchh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSAL--GGAAFNVYMLILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~--~~~a~~~~~li~~R~l~Gig~g~~~~~~ 109 (319)
++..+.+...+...+++.+|.++.|+++||+|||+.+........++..+ .....+...+.+.+++.|+...+.....
T Consensus 291 ~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 370 (467)
T PRK09556 291 FSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLI 370 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHH
Confidence 34455666777788899999999999999999998776654444333222 2234566677788999997655544444
Q ss_pred hHHHHhcCCCCCCcchhhHHHHHHHH-H-HHHHHHHHhhccc-cC-------CCcchHHHHHhhHHHHHHH
Q 047275 110 PLYLSEMAPPKHRGAFNIGFQVCTAI-G-VLGANLLNYGTQK-IK-------GGWGWRISLSMAAAPASIL 170 (319)
Q Consensus 110 ~~~i~e~~p~~~Rg~~~~~~~~~~~~-G-~~~~~~~~~~~~~-~~-------~~~gWr~~f~~~~~~~~~~ 170 (319)
.....|..|+++||...++......+ | .+...+.++..+. .+ ...+|+..|.+..+..++.
T Consensus 371 ~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~ 441 (467)
T PRK09556 371 GVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGC 441 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHH
Confidence 46777999999999988877655554 4 3444455554441 00 0357999887665544443
No 128
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.91 E-value=5e-09 Score=98.45 Aligned_cols=134 Identities=9% Similarity=-0.043 Sum_probs=98.0
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhh--hchhHHHHH--HHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccch
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRA--LGRKASILV--GGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr--~GRr~~~~~--~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~ 108 (319)
+..+.+.+.+...++..++.++.|+++|| +++|+...+ +.+...++.++...+++++.+++.+++.|++.++..+.
T Consensus 274 s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~ 353 (455)
T TIGR00892 274 DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGAL 353 (455)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHH
Confidence 44556666677777788888999999997 334443333 33333444555667789999999999999999999999
Q ss_pred hhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCc-chHHHHHhhHHHHHH
Q 047275 109 VPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGW-GWRISLSMAAAPASI 169 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-gWr~~f~~~~~~~~~ 169 (319)
...++.|.+|+++||...+.......+|..++..+...+. +.. +|++.|.+.++..++
T Consensus 354 ~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~---~~~g~~~~~f~~~~~~~li 412 (455)
T TIGR00892 354 LFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLV---DATKNYKYIFYASGSIVVS 412 (455)
T ss_pred HHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeee---hhcCCcchHHHHhhHHHHH
Confidence 9999999999999999888888888888766655443222 223 598888876665444
No 129
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.88 E-value=6.3e-09 Score=88.63 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=72.0
Q ss_pred HHhHHHHHHHHHHHhhhhhhhhh-hchhHHHHHHHHHHHHHHHH---hhhchhhhHHHHHHHHHhhhhhhccchhhHHHH
Q 047275 39 TFTSSPFIAGLIASLFASKVTRA-LGRKASILVGGVAFLAGSAL---GGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLS 114 (319)
Q Consensus 39 ~~~~~~~~g~~ig~~~~g~l~dr-~GRr~~~~~~~~~~~~~~~~---~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~ 114 (319)
.+-+.+..=-.+-++++|++.|| ||-|..-++-.++..+|.++ .+...++|++..+||+-|+|.......-..|++
T Consensus 83 LlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav 162 (459)
T KOG4686|consen 83 LLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAV 162 (459)
T ss_pred eeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeE
Confidence 33344444445677889999995 88886555544555556554 345689999999999999998888888889999
Q ss_pred hcCCCCCCcchhhHHHHHHHHHH
Q 047275 115 EMAPPKHRGAFNIGFQVCTAIGV 137 (319)
Q Consensus 115 e~~p~~~Rg~~~~~~~~~~~~G~ 137 (319)
.|+..++-+.+.++.....-+|.
T Consensus 163 ~wFKGKELn~vfGlqlSvAR~Gs 185 (459)
T KOG4686|consen 163 YWFKGKELNFVFGLQLSVARLGS 185 (459)
T ss_pred EEecCccccchhhHHHHHHHhhc
Confidence 99999998877666655555553
No 130
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.88 E-value=3.2e-07 Score=82.72 Aligned_cols=248 Identities=18% Similarity=0.165 Sum_probs=143.7
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHH-HHHhhhchh---hhHHHHHHHHHhhhhhhccchhh
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAG-SALGGAAFN---VYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~-~~~~~~a~~---~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
...+...+...+...+-+++.|.++|+.|+||..+.-.....+. .....++++ ++..++.-.+..++.......-.
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 34445556666666778889999999999998666544444443 333344433 45566777888888888888889
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHH---HHHHHhh---cc------------ccCCCcchHHHHHhhHHHHHHHH-
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLG---ANLLNYG---TQ------------KIKGGWGWRISLSMAAAPASILT- 171 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~---~~~~~~~---~~------------~~~~~~gWr~~f~~~~~~~~~~~- 171 (319)
++..+.+++++-++.++ .++..|.+. ..+..++ .. +..+...=|..+.+.++--+++.
T Consensus 138 s~L~~~~~k~~~~riS~---lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 138 SMLPRLTTKDNMGRISG---LGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFAL 214 (438)
T ss_pred hHhhhhcCccccCcccc---cccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHh
Confidence 99999999988776532 223333221 1111100 00 00122445666655554433322
Q ss_pred HhcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHh
Q 047275 172 LGALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQ 251 (319)
Q Consensus 172 ~~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 251 (319)
-+.+..||.++- .....+..+. ..+++ +.+++++. +++.+..++++.+.-
T Consensus 215 Pm~~~v~~~~~~---~~~~~~~l~~-------------g~k~L----------~~t~k~i~----~~~~i~~FLiA~~~~ 264 (438)
T COG2270 215 PMILNVHDAEKI---SSPPPTALRN-------------GFKEL----------KSTFKEIR----GRKNLVLFLIARFFY 264 (438)
T ss_pred HHHhcccccccc---cccchHHHHH-------------HHHHH----------HHHHHHHh----cccchHHHHHHHHHH
Confidence 233444444321 0000000111 11111 11222222 222344555666666
Q ss_pred hhhhhHhHhhhHHHHH-hcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 252 LTGINVISFYAPVLFR-TIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 252 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
..+.+++......+-. ..+.++. +.++..+...+++++|+++.|+|.||+|-|++++++.+...
T Consensus 265 ~DGv~til~~~~~fg~~~~gls~~-~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~ 329 (438)
T COG2270 265 IDGVNTILAMGGVFGAADLGLSST-ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILS 329 (438)
T ss_pred HhhHHHHHHHHHHHHHHHcCccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHH
Confidence 6777777666666655 5666644 45567778889999999999999999999988777766553
No 131
>PRK09952 shikimate transporter; Provisional
Probab=98.86 E-value=4.9e-08 Score=91.31 Aligned_cols=136 Identities=13% Similarity=0.053 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh---c-hhhhHHHHHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 43 SPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA---A-FNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 43 ~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~---a-~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
...+.+.++.++.|+++||+|||++++.+.+...++...... . .+...+++.-++.|++.+...+....++.|.+|
T Consensus 294 ~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p 373 (438)
T PRK09952 294 LVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFG 373 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 334455678889999999999999988876655444332222 1 234455566777889988888888999999999
Q ss_pred CCCCcchhhH-HHHHHHHHH-HHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCC
Q 047275 119 PKHRGAFNIG-FQVCTAIGV-LGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDT 180 (319)
Q Consensus 119 ~~~Rg~~~~~-~~~~~~~G~-~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es 180 (319)
++.|+...+. ..++..+|. +.+.+.++..+.. +.+|+..+....+..++..+..+.++|+
T Consensus 374 ~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~--~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 374 ASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF--GGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred cchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--CCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 9999865444 233333432 3333444433321 2358887776666655555555555654
No 132
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.84 E-value=4.1e-08 Score=90.03 Aligned_cols=134 Identities=13% Similarity=0.066 Sum_probs=96.1
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+..+.+.+.+...++..++.++.|++.||+|||+++..+.....++..... +........++.|++.++..+....+
T Consensus 233 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~p~~~~~ 309 (381)
T PRK03633 233 SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---SQAAMAPALFILGAAGFTLYPVAMAW 309 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 345666777778888899999999999999999999888877777655432 23345567889999888888999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
+.|..|+++++...........+|...+..+...+ .++.+|++.|.+.+...++..+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l---~~~~g~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 310 ACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAML---MQNYSDNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCccHHHHHHHHHHHHHHH
Confidence 99999988877666665566667665554433322 1235788888776655544433
No 133
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.81 E-value=6e-07 Score=81.45 Aligned_cols=122 Identities=13% Similarity=0.058 Sum_probs=88.8
Q ss_pred hhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc------hhhh--HHHHHHHHHhhhhhhccch
Q 047275 37 LTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA------FNVY--MLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 37 ~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a------~~~~--~li~~R~l~Gig~g~~~~~ 108 (319)
.-+..-++.+....-.+.+-|+.|++|-|...+++..+..+|..+-..+ +.++ ..+.+-.+.+.+---....
T Consensus 81 ~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~l 160 (480)
T KOG2563|consen 81 ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGL 160 (480)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhcc
Confidence 3345555666777778888999999999999999999999999875544 2334 5557777777765555555
Q ss_pred hhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcccc---CCCcchHH
Q 047275 109 VPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKI---KGGWGWRI 158 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~---~~~~gWr~ 158 (319)
-.-+..-|+|+++|..++.+...+..+|...+.+++-.+-.. .++..|..
T Consensus 161 PskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~ 213 (480)
T KOG2563|consen 161 PSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLF 213 (480)
T ss_pred ccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHH
Confidence 555667889999999998888888888887777765543221 23467865
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.80 E-value=9.5e-09 Score=97.47 Aligned_cols=130 Identities=12% Similarity=-0.059 Sum_probs=91.1
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--hhhhHHHHHHHHHhhhhhhccchh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--FNVYMLILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--~~~~~li~~R~l~Gig~g~~~~~~ 109 (319)
++..+.+.+.+...++..+|+++.|+++||+|||+++..+..+..+..++.... .+.+.+.+..++.|....+..+..
T Consensus 308 ~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (496)
T PRK03893 308 YDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLL 387 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhh
Confidence 345677788888889999999999999999999999888876666554433322 344455566666655554555677
Q ss_pred hHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhH
Q 047275 110 PLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAA 164 (319)
Q Consensus 110 ~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~ 164 (319)
+.++.|.+|+++||...+.......+|..++..+... +.+.+||+..+.+.+
T Consensus 388 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~---l~~~~g~~~~~~~~~ 439 (496)
T PRK03893 388 PKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGAL---IAQRLDLGTALASLS 439 (496)
T ss_pred HHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHH---HhccCChHHHHHHHH
Confidence 7889999999999998777766666665555444322 223467887765433
No 135
>PRK03545 putative arabinose transporter; Provisional
Probab=98.80 E-value=1.2e-07 Score=87.18 Aligned_cols=134 Identities=18% Similarity=0.076 Sum_probs=94.9
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHH-HHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGS-ALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~-~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
+.++.+.+.+...+++.++.++.|++.||+|||+... +..+...+. .+....++.+.+++.-++.|++.+...+....
T Consensus 239 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 317 (390)
T PRK03545 239 SENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQV 317 (390)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHH
Confidence 4556667777777888999999999999999987544 444333333 33445677888889999999998888777888
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT 171 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 171 (319)
.+.|..| ++|++..+.......+|...+.++...+ .+++|++..|.+.+...++..
T Consensus 318 ~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~---~~~~g~~~~~~~~~~~~~~~~ 373 (390)
T PRK03545 318 KVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQV---SLHLGLSSIGYVGAALALAAL 373 (390)
T ss_pred HHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccChhHHHHHHHHHHHHHH
Confidence 8888876 5788877766666666655554443222 235789999887766555433
No 136
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.79 E-value=5e-08 Score=90.52 Aligned_cols=146 Identities=14% Similarity=0.012 Sum_probs=108.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+.+.+...++..++.++.+++.||.++++.+..+.+...++.++..+.++.+.+.++.++.|++.+...+....
T Consensus 256 ~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 335 (417)
T PRK10489 256 MGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYT 335 (417)
T ss_pred CChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777778888899999999999999988888888888877777777777888888889999999999888788888
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-HhhccccCCCcchHHHHHhhHHHHHH-HHHhcccccCCh
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQKIKGGWGWRISLSMAAAPASI-LTLGALILPDTP 181 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es~ 181 (319)
++.|..|++.||+..+.......+|..++..+ ++.. +.+|++..+.+.+....+ ..+....+||..
T Consensus 336 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 336 LLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLG----AMMTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHH----HHhchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999998888777676665544433 3332 235677777655544333 334445556553
No 137
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.77 E-value=6.7e-08 Score=90.45 Aligned_cols=144 Identities=10% Similarity=-0.019 Sum_probs=95.0
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh-----ch------hhhHHHHHHHHHhhhh
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA-----AF------NVYMLILGRVLLGVGI 102 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~-----a~------~~~~li~~R~l~Gig~ 102 (319)
....+.......++..++.++.|+++||+|||+.+..+.++..++.++.++ .+ +...+....++.+...
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (481)
T TIGR00879 318 TDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFA 397 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHH
Confidence 344456666777788899999999999999999999887777776655541 11 2333333344433333
Q ss_pred hhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHH-HHhhccccCCCcchHHHHHhhHHHHHHHHH-hcccccCC
Q 047275 103 GFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANL-LNYGTQKIKGGWGWRISLSMAAAPASILTL-GALILPDT 180 (319)
Q Consensus 103 g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~es 180 (319)
.+..+....++.|.+|+++|+...+.......+|...+.. .++..+ ..+|++.|.+.+..+++..+ ..++.||+
T Consensus 398 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~----~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 398 MGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE----SIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred ccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCccceehhHHHHHHHHHHHHheecccC
Confidence 3444666678899999999999888888877777655443 333322 25788887766655544333 34456665
Q ss_pred h
Q 047275 181 P 181 (319)
Q Consensus 181 ~ 181 (319)
.
T Consensus 474 ~ 474 (481)
T TIGR00879 474 K 474 (481)
T ss_pred C
Confidence 3
No 138
>TIGR00898 2A0119 cation transport protein.
Probab=98.77 E-value=7e-08 Score=91.83 Aligned_cols=131 Identities=21% Similarity=0.110 Sum_probs=97.1
Q ss_pred HHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhh--hHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCc
Q 047275 46 IAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNV--YMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRG 123 (319)
Q Consensus 46 ~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~--~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg 123 (319)
+...++.++.+++.||+|||+.+..+.++..++.++..+.++. +..++.-++.+++.++..+....+.+|.+|++.|+
T Consensus 366 ~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 445 (505)
T TIGR00898 366 LVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRN 445 (505)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHh
Confidence 3446788889999999999999999988888887776666544 55666677888888888888999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCCh
Q 047275 124 AFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTP 181 (319)
Q Consensus 124 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~ 181 (319)
...+.......+|.+++..+.. .. ..++..++.+.+...++..+...++||+.
T Consensus 446 ~~~g~~~~~~~ig~~i~p~i~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 446 LGVGVCSTMARVGSIISPFLVY-LG----EKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred hhHhHHHHHHHHHHHHHhHHHH-HH----HHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 8877777777777665554433 21 13455666665555555555566788874
No 139
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.76 E-value=7.8e-08 Score=87.73 Aligned_cols=129 Identities=15% Similarity=0.045 Sum_probs=88.7
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHH--HHhhh--chhhhHHHHHHHHHhhhhhhccch
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGS--ALGGA--AFNVYMLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~--~~~~~--a~~~~~li~~R~l~Gig~g~~~~~ 108 (319)
++.+.+.......++..++.++.|+++||+|||+.+.....+..+.. ....+ ..+.+.+++..++.|++.+...+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 332 (394)
T TIGR00883 253 SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGP 332 (394)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhh
Confidence 34556666777778889999999999999999998775554444333 12222 246777788899999999999999
Q ss_pred hhHHHHhcCCCCCCcchhhH-HHHHHHHHHHHHH-HHHhhccccCCCcc-hHHHHHhhHH
Q 047275 109 VPLYLSEMAPPKHRGAFNIG-FQVCTAIGVLGAN-LLNYGTQKIKGGWG-WRISLSMAAA 165 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~-~~~~~~~G~~~~~-~~~~~~~~~~~~~g-Wr~~f~~~~~ 165 (319)
...++.|.+|+++|++..+. ...+..+|...+. +.++..+. .| |+..++...+
T Consensus 333 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~----~g~~~~~~~~~~~ 388 (394)
T TIGR00883 333 MGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM----TGDWYAIGYYLAA 388 (394)
T ss_pred HHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH----cCcchhHHHHHHH
Confidence 99999999999999987655 3444455543333 33333322 34 7766554443
No 140
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.74 E-value=4e-07 Score=84.35 Aligned_cols=112 Identities=17% Similarity=0.251 Sum_probs=87.7
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhch-hHHHHHHHHHHHHHHHHh-hhc---h-hhhHHHHHHHHHhhhhhhccc
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGR-KASILVGGVAFLAGSALG-GAA---F-NVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GR-r~~~~~~~~~~~~~~~~~-~~a---~-~~~~li~~R~l~Gig~g~~~~ 107 (319)
.+-.+++.++.-+|.+++++.+|+...|.|. |+-++.+.+...++.++- .++ . .-+.++++|++.|+|.|...
T Consensus 70 ~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a- 148 (488)
T KOG2325|consen 70 ATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA- 148 (488)
T ss_pred cchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-
Confidence 4667888999999999999999999999996 677788888888888775 332 3 56789999999999977664
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhh
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYG 146 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 146 (319)
..-.|+++-+.+++|.++.+....+..+|.+.|..++..
T Consensus 149 ~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 149 VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 566899998888888877666666666666655554433
No 141
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.74 E-value=1.2e-07 Score=86.25 Aligned_cols=134 Identities=17% Similarity=0.101 Sum_probs=86.0
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhH--HHH------HHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKA--SIL------VGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGF 104 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~--~~~------~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~ 104 (319)
++.+.+.+.+...++..++.++.|++.||+|||+ ... .+.+...+........++.+..+..-.+.+.+.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 327 (399)
T TIGR00893 249 SILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG- 327 (399)
T ss_pred cHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-
Confidence 3455666777778888999999999999999996 111 1111111112222223344444445555555544
Q ss_pred ccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcc-hHHHHHhhHHHHHHH
Q 047275 105 SNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWG-WRISLSMAAAPASIL 170 (319)
Q Consensus 105 ~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~ 170 (319)
..+....++.|..|+++||...+.......+|...+..+...+ .+..| |+..|.+.++..++.
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l---~~~~g~~~~~~~~~~~~~~~~ 391 (399)
T TIGR00893 328 AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAI---AATTGSFAGALMVVAALALIG 391 (399)
T ss_pred hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhh---ccCCCchhHHHHHHHHHHHHH
Confidence 7888889999999999999988888887777765554433222 23356 888877766554443
No 142
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.73 E-value=1.2e-07 Score=82.51 Aligned_cols=131 Identities=29% Similarity=0.345 Sum_probs=98.5
Q ss_pred hhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchh--hhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 36 LLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFN--VYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 36 ~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~--~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
..+...+...++..++.++.|+++||+|||+.+..+...+.++.++.++..+ .+.+++.|+++|++.|...+....++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 119 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALL 119 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4667788888888899999999999999999888888776666677777766 89999999999999999999999999
Q ss_pred HhcCCC-CCCcchhhHHHH-HHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHH
Q 047275 114 SEMAPP-KHRGAFNIGFQV-CTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPA 167 (319)
Q Consensus 114 ~e~~p~-~~Rg~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~ 167 (319)
.|+.|+ ++|+...+.... ...+|.+.+...+...... ...+||+.|.......
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 120 SEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLWGWRAAFLLAALLG 174 (338)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHH
Confidence 999998 567765555554 3445544444332222211 3468999766655544
No 143
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.72 E-value=3.6e-08 Score=94.91 Aligned_cols=262 Identities=16% Similarity=0.170 Sum_probs=167.0
Q ss_pred ccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--------------------h--
Q 047275 29 YCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--------------------F-- 86 (319)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--------------------~-- 86 (319)
-+++++...+.+.+.+=+|..+...+..+.+.|.-|-+.+-++.++++++++++++= +
T Consensus 126 RF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~ 205 (735)
T KOG3626|consen 126 RFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSS 205 (735)
T ss_pred hcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCcc
Confidence 344567778888999999999999999999999888889999999999998887641 0
Q ss_pred -------------------------h----h-hHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHH
Q 047275 87 -------------------------N----V-YMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIG 136 (319)
Q Consensus 87 -------------------------~----~-~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G 136 (319)
. + ..++++-++.|+|..+.++...+|+-|.+.+++-+.+.++......+|
T Consensus 206 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lG 285 (735)
T KOG3626|consen 206 SLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILG 285 (735)
T ss_pred ccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhh
Confidence 0 1 267899999999999999999999999999888888877777777777
Q ss_pred HHHHHHHHhhc----ccc----------CCCc--chHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHHHHHHHHH
Q 047275 137 VLGANLLNYGT----QKI----------KGGW--GWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEKAKKMLQR 200 (319)
Q Consensus 137 ~~~~~~~~~~~----~~~----------~~~~--gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~a~~~~~~ 200 (319)
...+.+++... .+. ++.| -|+.=|++.+...++..+-.++.|.+.+....+ .++ +..+.
T Consensus 286 PaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~----~~~-~~~~~ 360 (735)
T KOG3626|consen 286 PAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKR----KRA-RDLHV 360 (735)
T ss_pred hHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcccccc----chh-hhhcc
Confidence 66555544332 111 1112 266667777766666556666777765421110 000 00000
Q ss_pred HcCChhHHHHHHHHHHHHhhccccccchhhhh---cccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHH-HhcCCCchhh
Q 047275 201 VRGTADVQAELDDLIRASIVSRTVKHPFQTII---QRKYRPQLVMAILIPFFQQLTGINVISFYAPVLF-RTIKLSESTS 276 (319)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 276 (319)
...+.+ ......+..+.++|++ ++....++.+............+..+..|+|=++ ++++.+....
T Consensus 361 ~k~~~~----------~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~A 430 (735)
T KOG3626|consen 361 LKTESG----------GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLA 430 (735)
T ss_pred cccccc----------cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHH
Confidence 000000 0000001111222222 2222344555666666666677788888888666 5678876665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 047275 277 LLMSAVVTGGVSTIATITSMILTDKLGRK 305 (319)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 305 (319)
..+...+.-....+|.+++|+++.|+.-+
T Consensus 431 n~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 431 NILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 54444444445668889999999998554
No 144
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.72 E-value=2.4e-07 Score=85.03 Aligned_cols=112 Identities=12% Similarity=0.118 Sum_probs=93.7
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.+....+...+...++..++.++.+++.||+|+|+.+.++.+...+.....+++++.+.+++.+++.|++.|...+....
T Consensus 237 ~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~ 316 (382)
T TIGR00902 237 ISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMR 316 (382)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666677777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHH-HHHHHHHHHHHHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQ-VCTAIGVLGANLLN 144 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~-~~~~~G~~~~~~~~ 144 (319)
++.+. |+++|+...+... ....+|...+.+++
T Consensus 317 ~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~ 349 (382)
T TIGR00902 317 YIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFA 349 (382)
T ss_pred HHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 9999987766654 44556655554443
No 145
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.70 E-value=2.7e-07 Score=87.92 Aligned_cols=138 Identities=17% Similarity=0.038 Sum_probs=81.5
Q ss_pred HHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchh----hhHHHHHHHHHhhhhhhccchhhHHHHhcCCC
Q 047275 44 PFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFN----VYMLILGRVLLGVGIGFSNQSVPLYLSEMAPP 119 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~----~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~ 119 (319)
..++..+|.++.+++.||+|||+.++.+.....++..+.+...+ ...+...=+...++..+..+....+.+|.+|.
T Consensus 344 ~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~ 423 (502)
T TIGR00887 344 ALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPT 423 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCch
Confidence 34456678899999999999999998887776666554443221 11122111112222223345666788999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHH-HHHhhccccCC------CcchHHHHHhhHHHHHHHHHhcccccCCh
Q 047275 120 KHRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKG------GWGWRISLSMAAAPASILTLGALILPDTP 181 (319)
Q Consensus 120 ~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~------~~gWr~~f~~~~~~~~~~~~~~~~l~es~ 181 (319)
+.|++..+.......+|...+. +.++..+...+ +.++...|.+.+..+++..+..+++||+.
T Consensus 424 ~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 424 RYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCC
Confidence 9999987777766666644433 34443331110 23455555555544444444456779874
No 146
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.70 E-value=7.3e-07 Score=81.49 Aligned_cols=247 Identities=19% Similarity=0.167 Sum_probs=119.1
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHH--HHHHh-hhc----hhhh-HHHHHHHHHhhhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLA--GSALG-GAA----FNVY-MLILGRVLLGVGIG 103 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~--~~~~~-~~a----~~~~-~li~~R~l~Gig~g 103 (319)
+++++.+.+.+...+..++.+++.|.++||.|.||-+++......+ +-+.. .+. .|.+ ..+++=...|+...
T Consensus 40 Ls~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~ 119 (412)
T PF01306_consen 40 LSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFN 119 (412)
T ss_dssp --HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5678999999999999999999999999999977765544432222 22211 121 2221 12222223333344
Q ss_pred hccchhhHHHHhcCCCC--CCcchhhHHHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHHHHHh-cccccC
Q 047275 104 FSNQSVPLYLSEMAPPK--HRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASILTLG-ALILPD 179 (319)
Q Consensus 104 ~~~~~~~~~i~e~~p~~--~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~e 179 (319)
+..++.-+|+.+++..+ +=|+..+--++++.++...++ +.+. +=+..|++....+++..+. ....|+
T Consensus 120 ~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i---------~p~~~fwi~s~~~~il~lll~~~~~~ 190 (412)
T PF01306_consen 120 AGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI---------NPNIIFWIASAAAIILLLLLLLLKPD 190 (412)
T ss_dssp THHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred ccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee---------CccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 44445544544443221 113333334455555543333 2221 1124455444443333322 333444
Q ss_pred ChhhHHhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhH
Q 047275 180 TPNSIIQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVIS 259 (319)
Q Consensus 180 s~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (319)
.++....++.+.++. .+...+++.+..+.|+.+. +.+......+.++...
T Consensus 191 ~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~l~k~~~fw~-~~l~v~g~~~~Y~vfd 240 (412)
T PF01306_consen 191 VPPQAEVADALGAKK-----------------------------DKVSLKDVLSLFKMRNFWF-FVLFVIGVAAIYDVFD 240 (412)
T ss_dssp SSSSS-SSTTSSS-----------------------------------HHHHHHHTTSHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CchhhhhhcccccCC-----------------------------CCCcHHHHHHHhcchhHHH-HHHHHHHHHHHHHHHH
Confidence 433221111100000 0111222222223344433 2222222333344443
Q ss_pred hhhHHHHHhcCCCc---hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhh
Q 047275 260 FYAPVLFRTIKLSE---STSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFV 317 (319)
Q Consensus 260 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~ 317 (319)
...|.++...-.+. +...++...+..+.+.+...+..++.+|+|.|+.++++++++.+
T Consensus 241 qqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~i 301 (412)
T PF01306_consen 241 QQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAI 301 (412)
T ss_dssp HHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHH
Confidence 33444444332222 22345566677788999999999999999999999888887753
No 147
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.70 E-value=1.4e-07 Score=86.69 Aligned_cols=112 Identities=16% Similarity=0.035 Sum_probs=86.2
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHH-HhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSA-LGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~-~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
.+..+.+.+.+...+++.++.++.|++.||+|||+.+..+.....+... +.....+.+.+.+..++.|+..++..+..+
T Consensus 271 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (405)
T TIGR00891 271 LSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILP 350 (405)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHH
Confidence 3455667777788889999999999999999999998887765533322 233446677778888889988888888888
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL 143 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 143 (319)
.++.|.+|+++||+..+.......+|...+..+
T Consensus 351 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~ 383 (405)
T TIGR00891 351 KHLGEYFPTDQRAAGLGFTYQLGNLGGALAPII 383 (405)
T ss_pred HHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHH
Confidence 999999999999998877766666665544433
No 148
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.69 E-value=1.2e-06 Score=80.68 Aligned_cols=134 Identities=20% Similarity=0.241 Sum_probs=97.8
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhh-hchhHHHHHHHHHHHHHHHHhhhc--hhhhHHHHHHHHHhhhhhhccchhh
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRA-LGRKASILVGGVAFLAGSALGGAA--FNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr-~GRr~~~~~~~~~~~~~~~~~~~a--~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
++....+.+.+.--.-..++++|+++|| +|+|+++..+.++..+|-++.+.. .+...+.++=.+.++|.|+.=+...
T Consensus 60 ~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS 139 (498)
T COG3104 60 ETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNIS 139 (498)
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHH
Confidence 3333333333333334678889999998 899999999999999999888777 4788999999999999999999999
Q ss_pred HHHHhcCCCCC--CcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHH
Q 047275 111 LYLSEMAPPKH--RGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASIL 170 (319)
Q Consensus 111 ~~i~e~~p~~~--Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~ 170 (319)
.++.|..|+++ |....+++..+..+|.+.+.++..+.. +..||+.-|...++.-.+.
T Consensus 140 ~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~---~~~g~~~gF~~aavGm~~g 198 (498)
T COG3104 140 SLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLA---INYGWHVGFGLAAVGMIIG 198 (498)
T ss_pred HHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHH---HhhCHHHHHHHHHHHHHHH
Confidence 99999998653 444455555666677665554433222 2368999998877654443
No 149
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.66 E-value=7.9e-07 Score=82.84 Aligned_cols=104 Identities=20% Similarity=0.256 Sum_probs=81.8
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc-hhhhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA-FNVYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a-~~~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
...+.+.....++.+++.++.++++||+|||+++..+..+..++.....+. .+.+.+++..++.|++.+...+...+++
T Consensus 257 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 336 (437)
T TIGR00792 257 ELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALV 336 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666778889999999999999999999999988888776665554 4667778889999999999999999999
Q ss_pred HhcCC-------CCCCcchhhHHHHHHHHHHH
Q 047275 114 SEMAP-------PKHRGAFNIGFQVCTAIGVL 138 (319)
Q Consensus 114 ~e~~p-------~~~Rg~~~~~~~~~~~~G~~ 138 (319)
+|..| ++++|...+..+....+|..
T Consensus 337 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~ 368 (437)
T TIGR00792 337 ADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQA 368 (437)
T ss_pred hhhhhhhhhhcCccchHHHHHHHHHHHHHHHH
Confidence 98865 45567776666666666543
No 150
>PRK15075 citrate-proton symporter; Provisional
Probab=98.66 E-value=6.3e-07 Score=83.72 Aligned_cols=96 Identities=16% Similarity=0.044 Sum_probs=67.1
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHH----hhhchhhhHHHHHHHHHhhhhhhccch
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSAL----GGAAFNVYMLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~----~~~a~~~~~li~~R~l~Gig~g~~~~~ 108 (319)
+..+.........++..++.++.|+++||+|||+.+..+..+..+.... ....+++..+.+.-++.|++.|...+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 351 (434)
T PRK15075 272 SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGA 351 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhh
Confidence 3344555666677788899999999999999999887765443322211 111234444555667777777777777
Q ss_pred hhHHHHhcCCCCCCcchhhH
Q 047275 109 VPLYLSEMAPPKHRGAFNIG 128 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~ 128 (319)
...++.|..|++.|+...+.
T Consensus 352 ~~~~~~e~~p~~~rg~~~g~ 371 (434)
T PRK15075 352 MVVALTEVMPAEVRTAGFSL 371 (434)
T ss_pred HHHHHHHHCCCCccchheeH
Confidence 77889999999999986655
No 151
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.64 E-value=2e-07 Score=84.18 Aligned_cols=110 Identities=14% Similarity=0.020 Sum_probs=92.9
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchh-hhHHHHHHHHHhhhhhhccchhhH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFN-VYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~-~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
++.+.+.+.....++.+++.++.+++.||+|||+.+..+.....++..+..+.++ .+.+.+..++.|++.+...+....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 324 (365)
T TIGR00900 245 GSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGT 324 (365)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777888889999999999999999999998887777777777666664 888899999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANL 142 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~ 142 (319)
++.|..|+++||+..+.......+|...+..
T Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~ 355 (365)
T TIGR00900 325 LLQRRVPAELLGRVFGAQFSLSHAAWPLGLI 355 (365)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888887777777555443
No 152
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.63 E-value=3.4e-06 Score=76.17 Aligned_cols=233 Identities=15% Similarity=0.152 Sum_probs=124.6
Q ss_pred HHHhhhhhhhhhhc-----hhHHHHHHH-HHHHHHHHHhhhc-----h-----------hhhHHHHHHHHHhhhhhhccc
Q 047275 50 IASLFASKVTRALG-----RKASILVGG-VAFLAGSALGGAA-----F-----------NVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 50 ig~~~~g~l~dr~G-----Rr~~~~~~~-~~~~~~~~~~~~a-----~-----------~~~~li~~R~l~Gig~g~~~~ 107 (319)
...+.+|+.+|+.+ ||.-|++.- ..+..+..+..++ . ........-.+.|+|.+...+
T Consensus 29 p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T 108 (403)
T PF03209_consen 29 PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGT 108 (403)
T ss_pred HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHH
Confidence 35677999999999 886655544 4444433333221 2 123455777889999999999
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-HhhccccCCCcchHHHHHhhHHHHHHHHH--hcccccCChhhH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQKIKGGWGWRISLSMAAAPASILTL--GALILPDTPNSI 184 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~gWr~~f~~~~~~~~~~~~--~~~~l~es~~~~ 184 (319)
+..++++|.+|+++|++..++......+|.+.+.+. +...++.. .=|....+.....+...+ ...+-.|.....
T Consensus 109 ~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s---~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~ 185 (403)
T PF03209_consen 109 SFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS---PERLIQVIQGVALIALLLNLIALWGQEPRRSR 185 (403)
T ss_pred HHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC---HHHHHHHHHHHHHHHHHHHHHHHHhcccCCcc
Confidence 999999999999999999888888888887766544 33433221 234444444433332222 222222322110
Q ss_pred HhccCChHHHHHHHHHHcCChhHHHHHHHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHH
Q 047275 185 IQRSNGHEKAKKMLQRVRGTADVQAELDDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPV 264 (319)
Q Consensus 185 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (319)
..+..++ ++.... +.++++..+..-++....... .......--...=||
T Consensus 186 ~~~~~~~-----------~~~~f~-----------------~a~~~~~~~~~a~~f~~fl~l---~t~a~~~QD~iLEPy 234 (403)
T PF03209_consen 186 RAAAAER-----------PRPPFR-----------------EAWRQVWASPQARRFFVFLFL---GTLAFFMQDVILEPY 234 (403)
T ss_pred cccCCCC-----------CCccHH-----------------HHHHHHHhCCChhHHHHHHHH---HHHHHHhhHHHcCCc
Confidence 0000000 000000 011122222222322222211 111111111122333
Q ss_pred HHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH-hcCCchHHHHhhHHhhh
Q 047275 265 LFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTD-KLGRKVLFLVGGILMFV 317 (319)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~~~~g~~~~~~ 317 (319)
==+..+++..+++ ..+.+.+....+|....+++.. |.++++....|+..+.+
T Consensus 235 gg~Vfgmsv~eTT-~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~ 287 (403)
T PF03209_consen 235 GGEVFGMSVGETT-RLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGAL 287 (403)
T ss_pred hhHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Confidence 3455677766666 3455667777889988888888 56667776666655543
No 153
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.62 E-value=6e-07 Score=82.70 Aligned_cols=133 Identities=12% Similarity=0.140 Sum_probs=97.6
Q ss_pred hhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHh
Q 047275 36 LLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSE 115 (319)
Q Consensus 36 ~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e 115 (319)
+.+...+...+...++.++.|++.||+|||+.+.++..+..++..+...+++.+.+++.++++|++..........+..|
T Consensus 255 ~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 334 (396)
T TIGR00882 255 VFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITS 334 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555666677788999999999999999999998888877776778899999999999999987776667777888
Q ss_pred cCCCCCCcchhhH-HHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHHHHH
Q 047275 116 MAPPKHRGAFNIG-FQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 116 ~~p~~~Rg~~~~~-~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
..|++.++...+. .+....+|...+. +.++.. +.+||+..|.+.++...+..+
T Consensus 335 ~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~----~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 335 QFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMY----DSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred hCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHH----HhcccHHHHHHHHHHHHHHHH
Confidence 8888888764433 4455566654443 333332 235899998887766555443
No 154
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.62 E-value=1.4e-06 Score=81.25 Aligned_cols=144 Identities=17% Similarity=0.120 Sum_probs=89.4
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc---hhhh------HHHHHHHHHhhhhh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA---FNVY------MLILGRVLLGVGIG 103 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a---~~~~------~li~~R~l~Gig~g 103 (319)
+.++..+.+....+-..+.++++..+.||+|||+.++.+..+..+..++.... .+.. ..+++.++..++.+
T Consensus 303 ~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~ 382 (485)
T KOG0569|consen 303 TPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFA 382 (485)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhh
Confidence 34444555555555667888999999999999999999999888887765443 1111 22444444444444
Q ss_pred hc-cchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH-HHHhcccccCC
Q 047275 104 FS-NQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI-LTLGALILPDT 180 (319)
Q Consensus 104 ~~-~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es 180 (319)
.. .|....+.+|.+|++.|+.+.+......-+........-..+... +|= +.|++-.+++++ .++.++.+|||
T Consensus 383 ~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~---~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 383 IGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV---IGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred cCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 33 456677889999999999877666666555533322222112222 221 444444444444 44557789999
No 155
>PRK10504 putative transporter; Provisional
Probab=98.62 E-value=7.2e-07 Score=84.11 Aligned_cols=104 Identities=11% Similarity=-0.007 Sum_probs=80.1
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc---hhhhHHHHHHHHHhhhhhhccchhh
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA---FNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a---~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
+...+.......++..++.++.+++.||+|||+++..+..+..++..+..+. .+.+.+.+.-++.|++.+...+...
T Consensus 296 ~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 375 (471)
T PRK10504 296 PFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMN 375 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555666777788899999999999999998888777776654442 3444455677888999999888999
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHH
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGV 137 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~ 137 (319)
.++.+..|+++||...+..+....+|.
T Consensus 376 ~~~~~~~~~~~~g~~~~~~~~~~~~g~ 402 (471)
T PRK10504 376 TLTLKDLPDNLASSGNSLLSMIMQLSM 402 (471)
T ss_pred HHHHHcCCHHhccchHHHHHHHHHHHH
Confidence 999999999999988777776665553
No 156
>PRK03699 putative transporter; Provisional
Probab=98.59 E-value=5e-07 Score=83.23 Aligned_cols=136 Identities=13% Similarity=0.003 Sum_probs=96.5
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
++..+.+.+.+...++..+|.++.|+++||+|||+.+........+...+....++...+.+.-++.|++.++..+....
T Consensus 238 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 317 (394)
T PRK03699 238 MSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIIT 317 (394)
T ss_pred CChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777888889999999999999999999988877766666555556677777888889999999988888888
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHHHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
+..|..|.+ ++...+.......+|..++. +.++..+ ..||+..++...+...+...
T Consensus 318 ~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~----~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 318 LGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVA----HFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHH----HhCchhhhhhhHHHHHHHHH
Confidence 888877644 45444444444555544443 3333332 35788887766655444433
No 157
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.59 E-value=1e-06 Score=82.97 Aligned_cols=115 Identities=17% Similarity=0.188 Sum_probs=93.4
Q ss_pred cccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchh--HHHHHHHHHHHHHHHHhhh--------chhhhHHHHHHHHHh
Q 047275 30 CKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRK--ASILVGGVAFLAGSALGGA--------AFNVYMLILGRVLLG 99 (319)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr--~~~~~~~~~~~~~~~~~~~--------a~~~~~li~~R~l~G 99 (319)
.+++..+...+.-...+.+.+|++++|++.||+|.| ++++.+++.+.+..+...+ ..+.+.+.+.=++.|
T Consensus 312 lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G 391 (477)
T PF11700_consen 312 LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIG 391 (477)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHH
Confidence 335566666777777888899999999999999999 8999998888666555544 567788888999999
Q ss_pred hhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 047275 100 VGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLN 144 (319)
Q Consensus 100 ig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 144 (319)
+..|+.++..-++.+|..|+++.+.+.+++.+..-....+++++-
T Consensus 392 ~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 392 LFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887777766655555554443
No 158
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.59 E-value=4.7e-07 Score=94.57 Aligned_cols=131 Identities=15% Similarity=0.065 Sum_probs=102.9
Q ss_pred Ccc-hhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 33 NSQ-LLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 33 ~~~-~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
+.. ..+.+.+...++.++|+++.|+++||+++|+.+.++.++..++.++..+..+.+.++++-++.|++.++..+...+
T Consensus 266 s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 345 (1146)
T PRK08633 266 DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNA 345 (1146)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 344 6677778888899999999999999999999998888888888777777788888999999999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAA 165 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~ 165 (319)
++.|.+|++.||+..+..+....+|.+++..++..... ..++|...+.+.+.
T Consensus 346 ~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~--~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 346 LIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG--LGLSPAGLFYLIAL 397 (1146)
T ss_pred HHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hccCHHHHHHHHHH
Confidence 99999999999998888777777776544444433221 12456555554443
No 159
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.58 E-value=9.6e-07 Score=81.62 Aligned_cols=135 Identities=15% Similarity=0.094 Sum_probs=90.1
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHH-HHHHHHHHHHHHhh-----hchhhhHHHHHHHHHhhhhhhcc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASIL-VGGVAFLAGSALGG-----AAFNVYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~-~~~~~~~~~~~~~~-----~a~~~~~li~~R~l~Gig~g~~~ 106 (319)
+..+.+...+...+++.+++++.|+++||+|||+.+. .+.+...++..... ...+.+.+++..++.|++.++..
T Consensus 255 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 334 (402)
T TIGR00897 255 STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYV 334 (402)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH
Confidence 3445556666777889999999999999999998764 33333333322222 13466777889999999988865
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-HhhccccCCCcchHHHHHhhHHHHHHHHHh
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQKIKGGWGWRISLSMAAAPASILTLG 173 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~ 173 (319)
+. ...+.|.. |++||+..+..+....+|...++.+ +... +.+||+..+.+.+...++..+.
T Consensus 335 ~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~----~~~g~~~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 335 PL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFI----GFFGAIGVVWIFAALYVVSAFL 396 (402)
T ss_pred HH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHH----hhcchHHHHHHHHHHHHHHHHH
Confidence 54 45667764 5689998888888787776555443 3333 2367888887766555444333
No 160
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.58 E-value=7.9e-07 Score=81.97 Aligned_cols=146 Identities=14% Similarity=0.044 Sum_probs=93.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh-chhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA-AFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~-a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
.+....+...+...+++.+|.++.|++.||+|||+.+..+..+..++..+... ..+...+. -++.|++.|...+...
T Consensus 237 ~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~ 314 (393)
T PRK09705 237 ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCL 314 (393)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccchHHHHH
Confidence 34566677778888899999999999999999999988887776666554332 22222222 2467888888888777
Q ss_pred HHHHhcCC-CCCCcchhhHHHHHHHHHHHHH-HHHHhhccccCCCcchHHHHHhhHHHHHHHH-HhcccccCChh
Q 047275 111 LYLSEMAP-PKHRGAFNIGFQVCTAIGVLGA-NLLNYGTQKIKGGWGWRISLSMAAAPASILT-LGALILPDTPN 182 (319)
Q Consensus 111 ~~i~e~~p-~~~Rg~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~es~~ 182 (319)
....|..+ +++||+..+..+....++...+ .+.++..+.. + +|...|.+..+.+++.. ....+.||++.
T Consensus 315 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~-g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 315 LLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS-G--NYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C--CchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 77777775 5678876665555554443333 3334433321 1 37777766555544433 33556677653
No 161
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.56 E-value=1.3e-06 Score=80.13 Aligned_cols=108 Identities=11% Similarity=0.115 Sum_probs=84.5
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+.++.+.+.+...++..++.++.|++.||+|+|+.+..+.+...++.++.+.+++.+.+++..++.|++.+...+....+
T Consensus 238 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 317 (382)
T PRK11128 238 SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRY 317 (382)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666666777888999999999999999999999888888777888999999999999999999999999989
Q ss_pred HHhcCCCCCCcchhhHHH-HHHHHHHHHHH
Q 047275 113 LSEMAPPKHRGAFNIGFQ-VCTAIGVLGAN 141 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~-~~~~~G~~~~~ 141 (319)
+.+. +++++++..+... ....+|..++.
T Consensus 318 ~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~ 346 (382)
T PRK11128 318 IAAR-PGSEVIRLQALYSALAMGGSIAIMT 346 (382)
T ss_pred HHHC-CHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 8886 5666677655554 43445533333
No 162
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.56 E-value=2.2e-06 Score=77.99 Aligned_cols=263 Identities=15% Similarity=0.086 Sum_probs=147.1
Q ss_pred HHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 39 TFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 39 ~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
.+....+-..+..-++...+.|..|.|+++++..+...+...+.-+.++...+-+.-+.-|++.+... +-.+|+--..|
T Consensus 45 ~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~ev-ay~sYiys~v~ 123 (412)
T PF01770_consen 45 EIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAEV-AYYSYIYSVVD 123 (412)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHH-HHHHHheeecC
Confidence 45555555666677778889999999999999999999999998899999999999999999988864 45567777777
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHHHHHHH
Q 047275 119 PKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEKAKKML 198 (319)
Q Consensus 119 ~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~a~~~~ 198 (319)
+++=-++.+..-....+|...+.+++-.+-. .++.+.+.+..+......+.++..+++|..++...-+++..++.. .
T Consensus 124 ~~~yq~vts~~raa~l~g~~~s~~lgQllvs-~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~--~ 200 (412)
T PF01770_consen 124 KEHYQKVTSYTRAATLVGRFISSLLGQLLVS-FGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQD--A 200 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccc--c
Confidence 7665455544455555555555444433221 123456777666655545555566778776654432222111000 0
Q ss_pred HHHcCCh--hHHHHHHHH-HHHHhhccccccchhhhh---cccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcCCC
Q 047275 199 QRVRGTA--DVQAELDDL-IRASIVSRTVKHPFQTII---QRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIKLS 272 (319)
Q Consensus 199 ~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (319)
++...+. +.+++.++. ...+......+..++.+. ++-+.++.+....+.+....++++.+..|...+.++...+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~ 280 (412)
T PF01770_consen 201 NESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPS 280 (412)
T ss_pred ccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCC
Confidence 0000000 000000000 000000000111111221 2223344455566666677888899989988888877322
Q ss_pred chhhH--HHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 047275 273 ESTSL--LMSAVVTGGVSTIATITSMILTDKLGRK 305 (319)
Q Consensus 273 ~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~Grr 305 (319)
.+... +..-....+.+.++.+..|++-.++.+.
T Consensus 281 ~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~ 315 (412)
T PF01770_consen 281 DNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW 315 (412)
T ss_pred CCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH
Confidence 22221 1222233344455666677765555443
No 163
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.54 E-value=9.1e-07 Score=82.19 Aligned_cols=110 Identities=12% Similarity=-0.023 Sum_probs=71.8
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhch--hhhHHHHHHHHHhhhhhhccchhh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAF--NVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~--~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
++...+...+...+++.++.++.|++.||+|||+.+..+.+...+........+ +...+...-+..+.+..+..+..+
T Consensus 264 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (426)
T PRK12307 264 DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVP 343 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHH
Confidence 344555566667778899999999999999999998888776655544333222 222222333333333333445667
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHHHHH
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLGANL 142 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~ 142 (319)
.++.|.+|+++||+..+.......+|...++.
T Consensus 344 ~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~ 375 (426)
T PRK12307 344 KFLYDYFPLEVRGLGTGLIYNLAATSGTFNSM 375 (426)
T ss_pred HHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHH
Confidence 78899999999999877766555555544443
No 164
>TIGR00895 2A0115 benzoate transport.
Probab=98.54 E-value=4.9e-07 Score=82.61 Aligned_cols=111 Identities=15% Similarity=0.110 Sum_probs=84.6
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+..+.+.+.+...++..++.++.|++.||+|||+......+.......+.....+.+.+.+..++.|++.++..+....+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 362 (398)
T TIGR00895 283 SLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYAL 362 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777788888999999999999999999955544443333333333335677778889999999999999999999
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANLL 143 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 143 (319)
+.|.+|+++||...+.......+|..++..+
T Consensus 363 ~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 393 (398)
T TIGR00895 363 MALFYPTAIRATGVGWAIGIGRLGAIIGPIL 393 (398)
T ss_pred HhhcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988777776666665555443
No 165
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.53 E-value=1.7e-06 Score=81.32 Aligned_cols=133 Identities=14% Similarity=0.072 Sum_probs=79.0
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhh--chhHHHH-HHHHHHHHHHHHh--hhchhhhHHHHHHHHHhhhhhhccch
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRAL--GRKASIL-VGGVAFLAGSALG--GAAFNVYMLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~--GRr~~~~-~~~~~~~~~~~~~--~~a~~~~~li~~R~l~Gig~g~~~~~ 108 (319)
..+.+.......++..++.++.|+++||+ |||+... ....+..++.... ....+...+++.-++.|.+..+....
T Consensus 288 ~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 367 (452)
T PRK11273 288 LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVML 367 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHH
Confidence 34555556666677888999999999999 5554322 2222222222221 12234455556666666654443334
Q ss_pred hhHHHHhcCCCCCCcchhhHHHHHHHHH-HHHH-HHHHhhccccCCCcchHHHHHhhHHHHHHH
Q 047275 109 VPLYLSEMAPPKHRGAFNIGFQVCTAIG-VLGA-NLLNYGTQKIKGGWGWRISLSMAAAPASIL 170 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~~~~~~~~G-~~~~-~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~ 170 (319)
...++.|.+|+++||...+.......+| .+.+ .+.++.. +.+||+..|.+.+..+++.
T Consensus 368 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~----~~~g~~~~f~~~~~~~~~~ 427 (452)
T PRK11273 368 IGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV----DFFGWDGGFMVMIGGSILA 427 (452)
T ss_pred HHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH----HHhcchHHHHHHHHHHHHH
Confidence 4456789999999999888776655554 3333 3334433 3367998887666554443
No 166
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.52 E-value=1e-06 Score=83.33 Aligned_cols=141 Identities=11% Similarity=0.006 Sum_probs=85.6
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhH-------HHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKA-------SILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGF 104 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~-------~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~ 104 (319)
++....+.+.+...++..+|.++.|+++||+|||+ .......+..+..++.....+.+..++.-++.|++.++
T Consensus 285 ~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~ 364 (476)
T PLN00028 285 LSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQA 364 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 34456667777788889999999999999999762 22222222222223334455555556666677777666
Q ss_pred ccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 047275 105 SNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALIL 177 (319)
Q Consensus 105 ~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l 177 (319)
..+....++.|.. +++||...+....+..+|...+..+ .. ..+..+|+..|.+.++..++..+..+++
T Consensus 365 ~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l---~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 365 ACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLL---FF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHH---HH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 6666666666754 4688887766655555554433322 22 2234579988887766655544444444
No 167
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.51 E-value=5.9e-07 Score=81.43 Aligned_cols=100 Identities=15% Similarity=0.142 Sum_probs=78.2
Q ss_pred CcchhhHHhHH-HHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc-----------hhhhHHHHHHHHHhh
Q 047275 33 NSQLLTTFTSS-PFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA-----------FNVYMLILGRVLLGV 100 (319)
Q Consensus 33 ~~~~~~~~~~~-~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a-----------~~~~~li~~R~l~Gi 100 (319)
++++.+.+... ..++..+|.+++|++.||+|||+.+..+.++..++..+..+. ++.+.++.+.++.|+
T Consensus 242 ~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (356)
T TIGR00901 242 SKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAV 321 (356)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH
Confidence 34455544443 335678999999999999999999888888777665544332 355778889999999
Q ss_pred hhhhccchhhHHHHhcCCCCCCcchhhHHHHH
Q 047275 101 GIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVC 132 (319)
Q Consensus 101 g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~ 132 (319)
+.+...+...+++.|.+|+++||+..++.+..
T Consensus 322 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 353 (356)
T TIGR00901 322 TGGLGTVAFVAFLSKLSNPKFGATQMALLSSL 353 (356)
T ss_pred HhHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 99999999999999999999999877666543
No 168
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.50 E-value=2.3e-06 Score=79.94 Aligned_cols=97 Identities=11% Similarity=0.010 Sum_probs=59.5
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh--h--chhhhHHHHHHHHHhhhhhhccchh
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG--A--AFNVYMLILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~--~--a~~~~~li~~R~l~Gig~g~~~~~~ 109 (319)
..+.+...+...++..++.++.|+++||+|||+.+........+...... . ..+....+..=.+.+...+...+..
T Consensus 278 ~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (432)
T PRK10406 278 ANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSIS 357 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666667778888999999999999987776554333322111 1 1222222221122333344444556
Q ss_pred hHHHHhcCCCCCCcchhhHHH
Q 047275 110 PLYLSEMAPPKHRGAFNIGFQ 130 (319)
Q Consensus 110 ~~~i~e~~p~~~Rg~~~~~~~ 130 (319)
..+.+|++|++.|+...+...
T Consensus 358 ~~~~~e~fp~~~r~t~~g~~~ 378 (432)
T PRK10406 358 GILKAEMFPAQVRALGVGLSY 378 (432)
T ss_pred HHHHHHHCCCCccchhhhHHH
Confidence 778899999999998766554
No 169
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.49 E-value=2.4e-06 Score=81.12 Aligned_cols=144 Identities=13% Similarity=0.134 Sum_probs=96.1
Q ss_pred cCcchhhHHh-HHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHH---hhhc-hhhhHHHHHHHHHhhhhhhcc
Q 047275 32 FNSQLLTTFT-SSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSAL---GGAA-FNVYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 32 ~~~~~~~~~~-~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~---~~~a-~~~~~li~~R~l~Gig~g~~~ 106 (319)
++.++.+... ....++..+|.++.|++.||+|||+.+..+.++..+..++ .+.. ++...+.+.=+++.+..|...
T Consensus 255 ~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~ 334 (491)
T PRK11010 255 FDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGT 334 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 4556666665 4556788999999999999999998877665554444322 1222 355555566677666666666
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHHHHHHH-HHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVL-GANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPD 179 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~e 179 (319)
+....+..|..|++.++...+..+....+|.. .+.+.++..+ .+||+..|.+..+.++...+....+++
T Consensus 335 ~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~----~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 335 AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE----AHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67778888999999888876666666666643 4444444433 358999888777666655444444444
No 170
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.47 E-value=4.3e-06 Score=77.28 Aligned_cols=110 Identities=18% Similarity=0.160 Sum_probs=82.3
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc-----hhhhHHHHHHHHHhhhhhhccc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA-----FNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a-----~~~~~li~~R~l~Gig~g~~~~ 107 (319)
++.+.+.......++..+|.++.|++.||+|||+.+..+..+..++..+.... .+.+.+++.-++.|+|.+...+
T Consensus 249 ~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 328 (406)
T PRK15402 249 SSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANA 328 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhh
Confidence 34455555555667788999999999999999999988888777766655443 3566778899999999998877
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL 143 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 143 (319)
....... ..++++||+..+..+....+|..++..+
T Consensus 329 ~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 363 (406)
T PRK15402 329 GLYRLTL-FSSDVSKGTVSAAMGMLSMLIFTVGIEL 363 (406)
T ss_pred hHHHHHh-hhccccccHHHHHHHHHHHHHHHHHHHH
Confidence 7666553 3456899998888888777776555443
No 171
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.46 E-value=1.5e-06 Score=82.66 Aligned_cols=135 Identities=16% Similarity=0.155 Sum_probs=108.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++...+.+.+...+|+++|+++.+++.+|+++++.+..+.+.+.++.+..+++++.+..++.-++.|++.....+...+
T Consensus 251 ~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t 330 (524)
T PF05977_consen 251 GGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNT 330 (524)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677788999999999999999999999999999999999999999999999999999999999999999999989899
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~ 169 (319)
.+-+..|++.||+..++.......+..++.++...+ .+.+|-+..+.+.++..++
T Consensus 331 ~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~l---a~~~g~~~al~~a~~~lll 385 (524)
T PF05977_consen 331 LVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFL---ADHFGVRTALLIAGAALLL 385 (524)
T ss_pred HHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCHHHHHHHHHHHHHH
Confidence 999999999999988777766655544444332221 1235677777666654333
No 172
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.44 E-value=2e-06 Score=79.57 Aligned_cols=109 Identities=11% Similarity=0.013 Sum_probs=82.1
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhh-hhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTR-ALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~d-r~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
.+.+...+...++...+....+++.| |++.++.+..+.....++..+.+.+++++.+.+..++.|++.+...+...+++
T Consensus 243 ~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~ 322 (400)
T PRK11646 243 SAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLS 322 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 44455545555555545555565555 56767777788877888877777888888888888999999998889999999
Q ss_pred HhcCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 047275 114 SEMAPPKHRGAFNIGFQVCTAIGVLGANLL 143 (319)
Q Consensus 114 ~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 143 (319)
.|.+|+++||+..+..+....+|...+..+
T Consensus 323 ~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l 352 (400)
T PRK11646 323 ASLADARARGSYMGFSRLGLALGGAIGYIG 352 (400)
T ss_pred HhcCCcccchhhhhHHHHHHHHHHHhcccc
Confidence 999999999998888888877776555433
No 173
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.43 E-value=5.1e-06 Score=75.81 Aligned_cols=126 Identities=18% Similarity=0.273 Sum_probs=89.4
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc-----hhhhHHHHHHHHHhhhhhhcc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA-----FNVYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a-----~~~~~li~~R~l~Gig~g~~~ 106 (319)
.++.+.+.+.+...++..++.++.|++.||+|||+.+..+..+..++..+.... .+...+++.-++.|++.+...
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (385)
T TIGR00710 239 VSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMIS 318 (385)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 345667777777888889999999999999999999988877777766554432 234556667888999999999
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHH-HHHHHHHHHHHhhccccCCCcchHHHHHh
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCT-AIGVLGANLLNYGTQKIKGGWGWRISLSM 162 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~gWr~~f~~ 162 (319)
+....+..|..| ++||...+..+... ..|.+.+.+.+. . .+..+|...+..
T Consensus 319 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~-~---~~~~~~~~~~~~ 370 (385)
T TIGR00710 319 SIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSL-I---HGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHh-c---cccChHHHHHHH
Confidence 999889888876 67887766655443 345555555552 1 222356555443
No 174
>PRK09848 glucuronide transporter; Provisional
Probab=98.42 E-value=5.3e-06 Score=77.80 Aligned_cols=96 Identities=11% Similarity=0.131 Sum_probs=76.0
Q ss_pred HHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--hhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCC-
Q 047275 44 PFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--FNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPK- 120 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~- 120 (319)
..++.+++.++.+++.||+|+|+++..+..+..++..+..+. .+++.+++.-++.|+|.+...+...++.+|..|.+
T Consensus 273 ~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~ 352 (448)
T PRK09848 273 NLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGE 352 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence 356677899999999999999999999998888877665554 36677788889999999999999999999988754
Q ss_pred ------CCcchhhHHHHHHHHHHHH
Q 047275 121 ------HRGAFNIGFQVCTAIGVLG 139 (319)
Q Consensus 121 ------~Rg~~~~~~~~~~~~G~~~ 139 (319)
++|.+.+..+...-+|..+
T Consensus 353 ~~~g~r~~G~~~~~~~~~~klg~ai 377 (448)
T PRK09848 353 YLTGVRIEGLTYSLFSFTRKCGQAI 377 (448)
T ss_pred HhhCccchhHHHHHHHHHHHHHHHH
Confidence 3476666666666666433
No 175
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.41 E-value=5.2e-06 Score=71.09 Aligned_cols=145 Identities=16% Similarity=0.140 Sum_probs=103.0
Q ss_pred cccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc-------hhhhHHHHHHHHHhhhh
Q 047275 30 CKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA-------FNVYMLILGRVLLGVGI 102 (319)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a-------~~~~~li~~R~l~Gig~ 102 (319)
++.+.++.+.+....-+|..+| ++.|.+.|++|.+.+++++.+...+|..+.-++ ..+|.+++.-++.|.+.
T Consensus 32 l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~ 110 (250)
T PF06813_consen 32 LGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSS 110 (250)
T ss_pred hCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccH
Confidence 4456788888888889998775 889999999999999999999999987764432 47789999999999987
Q ss_pred hhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHH-HHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCC
Q 047275 103 GFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGV-LGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDT 180 (319)
Q Consensus 103 g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es 180 (319)
+...........+.+| ++||.+.++.-...+++. +...+-....++ -.-+..+.+...+.++.++..+++++.
T Consensus 111 ~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~----~~~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 111 CWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD----DPSSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred HHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC----ChHHHHHHHHHHHHHHHHHHhhheecc
Confidence 7766666666667787 689998888777777763 333333333332 234566666666665554444444433
No 176
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.40 E-value=2.8e-06 Score=79.33 Aligned_cols=130 Identities=19% Similarity=0.197 Sum_probs=87.2
Q ss_pred HHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhh--ccchhhHHHHhcCCCCC
Q 047275 44 PFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGF--SNQSVPLYLSEMAPPKH 121 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~--~~~~~~~~i~e~~p~~~ 121 (319)
..+..++.+...|.++||+|||..+.+..+...+...+..+.. +|.++ +.|+..+. ..+...+|++|.+..++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhH
Confidence 3556678899999999999999999999998888877766555 44433 55554433 34555678999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHH-hhccccCCCcchHHHHHhhHHHHHH-HHHhcccccCChh
Q 047275 122 RGAFNIGFQVCTAIGVLGANLLN-YGTQKIKGGWGWRISLSMAAAPASI-LTLGALILPDTPN 182 (319)
Q Consensus 122 Rg~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es~~ 182 (319)
|....++....+..+...++..+ +.... .|.-..|.+.....++ ....+.++||+-.
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~----~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKF----LGIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHh----cCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 98776666665555544444333 22211 2444566666655544 4455677898854
No 177
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.37 E-value=2.5e-06 Score=79.74 Aligned_cols=137 Identities=16% Similarity=0.054 Sum_probs=81.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhh--ch-hHHHHHHHH--HHHHHHHHhhhchhhhHHHHHHHHHhhhhhhcc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRAL--GR-KASILVGGV--AFLAGSALGGAAFNVYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~--GR-r~~~~~~~~--~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~ 106 (319)
++....+...+...+++.+|.++.|+++||+ ++ |.......+ ......+......+...+...-+..|++..+..
T Consensus 276 ~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 355 (434)
T PRK11663 276 VDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQ 355 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHH
Confidence 3445566677778889999999999999999 33 332222111 111111111112233344445555555433333
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHH-HHHHhhccccCCCcchHHHHHhhHHHHHHHHH
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGA-NLLNYGTQKIKGGWGWRISLSMAAAPASILTL 172 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 172 (319)
.....+++|..|+++||...+..+....+|...+ .+.++.. +++||+..|.+.++..++..+
T Consensus 356 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~----~~~g~~~~f~~~~~~~~~~~~ 418 (434)
T PRK11663 356 MLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVL----EIWHWTGFFVVISIAAGISAL 418 (434)
T ss_pred HHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHH----HhcccHHHHHHHHHHHHHHHH
Confidence 3345677899999999998888877777776544 3444433 346899988876666554433
No 178
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.36 E-value=3.1e-06 Score=79.97 Aligned_cols=110 Identities=11% Similarity=0.096 Sum_probs=88.4
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh----chhhhHHHHHHHHHhhhhhhccc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA----AFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~----a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
.++.+.+.......++..++.++.|++.||+|||+.+..+..+..++..+... ..+++.+...-++.|+|.|...+
T Consensus 288 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~ 367 (485)
T TIGR00711 288 YTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFM 367 (485)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777888999999999999999999999988888877766542 23556777788999999999888
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGAN 141 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~ 141 (319)
.....+.|..|+++||...+.......+|..++.
T Consensus 368 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~ 401 (485)
T TIGR00711 368 PLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGT 401 (485)
T ss_pred HHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 8888888889999999988888777777755443
No 179
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.35 E-value=5.8e-06 Score=76.23 Aligned_cols=131 Identities=11% Similarity=-0.098 Sum_probs=92.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.++.+.+.+.....+|..+|+++.+++.||+++|+++..+.. ..+...+.++.++++...+.-++.|++.+...++..+
T Consensus 238 ~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~ 316 (393)
T PRK11195 238 ITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNA 316 (393)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 456677788888889999999999999999999988877753 3444444455677777788888999999998888888
Q ss_pred HHHhcCCCCC-CcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHH
Q 047275 112 YLSEMAPPKH-RGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAA 165 (319)
Q Consensus 112 ~i~e~~p~~~-Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~ 165 (319)
.+.|..|++. +|+..+..+....+|...+..+....... ...++..|...+.
T Consensus 317 ~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 369 (393)
T PRK11195 317 LLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKL--GVPVVAVIVGFGL 369 (393)
T ss_pred HHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHc--CCCHHHHHHHHHH
Confidence 8888766654 68877777777777755554443332211 2356665544443
No 180
>PRK10054 putative transporter; Provisional
Probab=98.34 E-value=4.4e-06 Score=77.09 Aligned_cols=112 Identities=11% Similarity=0.043 Sum_probs=79.4
Q ss_pred HHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc-hhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhh
Q 047275 49 LIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA-FNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNI 127 (319)
Q Consensus 49 ~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a-~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~ 127 (319)
.....+.|++.||++||+.+..+..+..++.....++ .+.+.+++..++.|+|.+...+....++.|..|++.|+.+.+
T Consensus 258 ~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~ 337 (395)
T PRK10054 258 VSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFS 337 (395)
T ss_pred eeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHh
Confidence 3445677899999999999999988888777666554 577778889999999999988888899999999999998765
Q ss_pred HHHHHHHHHHHHHHH-HHhhccccCCCcchHHHHHhhHH
Q 047275 128 GFQVCTAIGVLGANL-LNYGTQKIKGGWGWRISLSMAAA 165 (319)
Q Consensus 128 ~~~~~~~~G~~~~~~-~~~~~~~~~~~~gWr~~f~~~~~ 165 (319)
..+. ..+|...+.. .++..+ +.|-...|.+...
T Consensus 338 ~~~~-~~~G~~~Gp~~~G~l~~----~~g~~~~~~~~~~ 371 (395)
T PRK10054 338 AQSL-GWLGAAINPLVSGVILT----TLPPWSLFVILAL 371 (395)
T ss_pred HHHH-HHHHHHHHHHHHHHHHH----HcChhhHHHHHHH
Confidence 4442 2234333332 223222 2455555555433
No 181
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.33 E-value=2.6e-06 Score=75.57 Aligned_cols=130 Identities=15% Similarity=0.112 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchh--h--hHHHHHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 43 SPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFN--V--YMLILGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 43 ~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~--~--~~li~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
+..+..+-|.++.+++.||+|||+.+..+.+++.++.++.....+ . ..++.+|++. .+.+..+++|.-|.+|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYP 464 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccc
Confidence 345566889999999999999999999999999999887554433 2 2345666554 4556678899999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCCh
Q 047275 119 PKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTP 181 (319)
Q Consensus 119 ~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~ 181 (319)
...|+...+..+...=+|.++.++++...+. +=-.+..+.+...++..+..-++|-++
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA~~~e~-----s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIAMRAEL-----STSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHHHHhcc-----ceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999986666555556666666655532221 111344455555455556666666554
No 182
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.32 E-value=4.6e-06 Score=77.03 Aligned_cols=135 Identities=12% Similarity=0.040 Sum_probs=85.1
Q ss_pred CcchhhHHhHH-HHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHh---hhc-hhhhHHHHHH----HHHhhhhh
Q 047275 33 NSQLLTTFTSS-PFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALG---GAA-FNVYMLILGR----VLLGVGIG 103 (319)
Q Consensus 33 ~~~~~~~~~~~-~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~---~~a-~~~~~li~~R----~l~Gig~g 103 (319)
++++.+.+... ...+..+|.++.|++.||+|||+.+..+.....+..+.. +.. .+.+.+++.= +..|++.+
T Consensus 243 ~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 322 (402)
T PRK11902 243 SAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTA 322 (402)
T ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 34555555443 344678999999999999999998877776655554322 333 3445444433 56777788
Q ss_pred hccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhc
Q 047275 104 FSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGA 174 (319)
Q Consensus 104 ~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~ 174 (319)
...+..+.++.+..|.++++.......++...+ +.+.+... +.+||+..|.+..+.+++..+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~G~l~----~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 323 AFVALLMALCNRSFSATQYALLSALASVGRVYV---GPTSGYLV----EAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH---HHHHHHHH----HHhChHHHHHHHHHHHHHHHHHH
Confidence 888888889899888877765443333333222 22222222 34789999988777765544433
No 183
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.32 E-value=6.3e-06 Score=74.49 Aligned_cols=147 Identities=16% Similarity=0.129 Sum_probs=106.9
Q ss_pred ccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 31 KFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 31 ~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
++++.+...+.-...+.+++|+++.|++.||+|-|+++..+++...+..+...+......+.+.=.+.|...|+.++.+-
T Consensus 284 gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SR 363 (438)
T COG2270 284 GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSR 363 (438)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHH
Confidence 34566777777777888899999999999999999999999999999888877777777788888999999999999999
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCC
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDT 180 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es 180 (319)
+|.++.+|+++-+++.+++.+.--.+...++ +.+... .+.+ .=|.-+....+...+-++..+.+|+.
T Consensus 364 Sy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t-~iTg--~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 364 SYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVIT-QITG--SSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHH-HHhc--chhhHHHHHHHHHHhhHhhEEeecCC
Confidence 9999999999999877777666555544443 333322 2222 24443333333323333444455554
No 184
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.31 E-value=5.8e-06 Score=78.65 Aligned_cols=110 Identities=13% Similarity=-0.026 Sum_probs=87.0
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh---chhhhHHHHHHHHHhhhhhhccchh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA---AFNVYMLILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~---a~~~~~li~~R~l~Gig~g~~~~~~ 109 (319)
++.+.+.......++..+++++.|++.||+|||+.+..+.++..++..+... ..+.+.....-++.|+|.|...+..
T Consensus 293 s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~ 372 (495)
T PRK14995 293 SPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLAS 372 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHH
Confidence 3455566666667788899999999999999999998888877776654332 3456667778899999999999989
Q ss_pred hHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHH
Q 047275 110 PLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANL 142 (319)
Q Consensus 110 ~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~ 142 (319)
...+.+..|++++|...+.......+|...+..
T Consensus 373 ~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~a 405 (495)
T PRK14995 373 TSAIMAAAPPEKAAAAGAIETMAYELGAGLGIA 405 (495)
T ss_pred HHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHH
Confidence 889999999999999888887777777554443
No 185
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.31 E-value=3.6e-06 Score=76.02 Aligned_cols=135 Identities=19% Similarity=0.153 Sum_probs=92.6
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhh-h-chhHHHH-HHHHHHHHHHHHhhhc--hhhhHHHHHHHHHhhhhhhcc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRA-L-GRKASIL-VGGVAFLAGSALGGAA--FNVYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr-~-GRr~~~~-~~~~~~~~~~~~~~~a--~~~~~li~~R~l~Gig~g~~~ 106 (319)
++....++..+.+=.+++.|++++|+++|+ | |||.... +.++...++-...-.+ .|+.+..++=++.|+.+-+-.
T Consensus 285 ~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq 364 (448)
T COG2271 285 FSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ 364 (448)
T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH
Confidence 445666677788888999999999999998 4 7885332 2222222222222233 466899999999999998888
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHHHH-HHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCTAI-GVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~ 169 (319)
-.......|..|++--|.+.+....+..+ |...+. +....+.+++||...|.+..+.+++
T Consensus 365 mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~---~~~g~i~d~~gW~g~Fi~~~~~a~l 425 (448)
T COG2271 365 MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAG---LPLGYIADTWGWDGGFIVLSIAALL 425 (448)
T ss_pred HHHHHHHhccccHhhccchhchhhhHHHHhhHHhcC---CcceeeEecCCCcchHHHHHHHHHH
Confidence 88888889999999999888887777766 543332 2223333447898887664444333
No 186
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.28 E-value=1.7e-05 Score=72.88 Aligned_cols=135 Identities=12% Similarity=-0.002 Sum_probs=88.2
Q ss_pred CcchhhHHhHHHH-HHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh------chhhhHHHHHHHHHhhhhhhc
Q 047275 33 NSQLLTTFTSSPF-IAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA------AFNVYMLILGRVLLGVGIGFS 105 (319)
Q Consensus 33 ~~~~~~~~~~~~~-~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~------a~~~~~li~~R~l~Gig~g~~ 105 (319)
++++.+....... .+..+|.++.|++.||+|+|+.+..+.....+....... .++...+...-.+.+++.|..
T Consensus 241 s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (390)
T TIGR02718 241 PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGIT 320 (390)
T ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHH
Confidence 4555666555443 466788999999999999999988877655333222111 233444556666777778888
Q ss_pred cchhhHHHHhcCCC-CCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHH
Q 047275 106 NQSVPLYLSEMAPP-KHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASIL 170 (319)
Q Consensus 106 ~~~~~~~i~e~~p~-~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~ 170 (319)
.+.....+.+..++ +++|+..+..+....+|...+..++... .+.+||+..|.+.++..++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l---~~~~G~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 321 SVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYL---TDRFGYAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHccHHHHHHHHHHHHHH
Confidence 78888887777776 7889877777777777765554443222 12357888887766654443
No 187
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.27 E-value=6.8e-06 Score=86.01 Aligned_cols=131 Identities=15% Similarity=0.054 Sum_probs=95.5
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--------------------hhhhHH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--------------------FNVYML 91 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--------------------~~~~~l 91 (319)
.+....+.+.+...+|+++|+++.|++.|+.++++.+..+.++..++.+..++. .+.+.+
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRI 337 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHH
Confidence 345677888888999999999999999998887776555555555444433332 677888
Q ss_pred HHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhH
Q 047275 92 ILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAA 164 (319)
Q Consensus 92 i~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~ 164 (319)
+++-++.|++.|...+...+++.+.+|++.||++.+..+....+|..++.++...+.. ...++...+.+.+
T Consensus 338 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~--~~~~~~~~~~~~~ 408 (1140)
T PRK06814 338 LIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA--LGFSIPWIILFIA 408 (1140)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH--hccCHHHHHHHHH
Confidence 8999999999999999999999999999999998888877777765555443322211 1235555554433
No 188
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.27 E-value=0.00015 Score=70.89 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=90.5
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhh-hchhHHHHHHHHHHHHHHHHhhhchh--------hhHHHHHHHHHhhhhhh
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRA-LGRKASILVGGVAFLAGSALGGAAFN--------VYMLILGRVLLGVGIGF 104 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr-~GRr~~~~~~~~~~~~~~~~~~~a~~--------~~~li~~R~l~Gig~g~ 104 (319)
......+...+....-+.+++.|+++|+ +||++.++++.++..+|..+.+++.. ...++++=.+..+|.|+
T Consensus 22 ~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~Gg 101 (654)
T TIGR00926 22 ESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGG 101 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccc
Confidence 3444444455555556888889999994 99999999999999998877655321 23466888899999999
Q ss_pred ccchhhHHHHhcCCCCCCcc---hhhHHHHHHHHHHHHHH-HHHhhcccc---CCCcchHHHHHhhHHHHHH
Q 047275 105 SNQSVPLYLSEMAPPKHRGA---FNIGFQVCTAIGVLGAN-LLNYGTQKI---KGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 105 ~~~~~~~~i~e~~p~~~Rg~---~~~~~~~~~~~G~~~~~-~~~~~~~~~---~~~~gWr~~f~~~~~~~~~ 169 (319)
.-+...+...|-++++++.. +-..+..+..+|.+++. +..+..+.. ....+|...|.+..+..++
T Consensus 102 iKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~i 173 (654)
T TIGR00926 102 IKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMIL 173 (654)
T ss_pred cccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHH
Confidence 99999999999987654432 33344444455544333 333332221 1234799988877665444
No 189
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.26 E-value=6.9e-06 Score=76.84 Aligned_cols=144 Identities=14% Similarity=0.068 Sum_probs=79.4
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHH---HHHHHhhh--chhhhHHHHHHHHHhhhhhhccc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFL---AGSALGGA--AFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~---~~~~~~~~--a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
++.+.+.......+++.++.++.|+++||+|+++....+..... ++...... ..+.+...+.-++.|.+..+...
T Consensus 285 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 364 (438)
T TIGR00712 285 ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVM 364 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHH
Confidence 44555666666777889999999999999965432222222111 11111111 22334444555566655433222
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHH-HHHH-HHHHhhccccCCCcchHHHHHhhHHHHHH-HHHhcccccCC
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIG-VLGA-NLLNYGTQKIKGGWGWRISLSMAAAPASI-LTLGALILPDT 180 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G-~~~~-~~~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~l~es 180 (319)
.......|.+|+++||...+..+....+| ...+ .+.+... +++||...+.+.....++ ..+....+||+
T Consensus 365 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 365 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV----DFFGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHH----HhccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33356789999999998877776544443 3333 3333332 235788877654443333 33444556665
No 190
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.24 E-value=3.7e-05 Score=70.09 Aligned_cols=112 Identities=12% Similarity=0.117 Sum_probs=74.3
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHh---hh-chhhhHHHHHHHHHhhhhhhccc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALG---GA-AFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~---~~-a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
+++++.+.+.....++..++.++.|++.||+|||+.+..+..+..+..... .. ..+++.+.++-.+.+.+.+...+
T Consensus 227 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T PRK11102 227 VSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISS 306 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Confidence 345667777777888889999999999999999999988877654433222 11 23455555555556666666666
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHH-HHHHHHHHHHHHH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQV-CTAIGVLGANLLN 144 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~-~~~~G~~~~~~~~ 144 (319)
....++.|..| ++||...+.... ...+|...+.+.+
T Consensus 307 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 307 NAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677778766 788876655433 2345555555544
No 191
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.24 E-value=2.7e-05 Score=71.83 Aligned_cols=132 Identities=8% Similarity=-0.025 Sum_probs=87.4
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHH-HHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLA-GSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~-~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
+.+..+.......++..+|.++.+++.||.+|+ .++.+...... ..++.....+.+.+.+.-++.|++.+...+...+
T Consensus 250 s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 328 (394)
T PRK10213 250 GVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWST 328 (394)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 455666777777788899999999999996544 44444343333 3344445667788888999999999999999998
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~ 169 (319)
++.+..| +++++..+.......+|...+..+...+ .+..|++..+...++...+
T Consensus 329 ~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l---~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 329 WITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYA---LDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccChhhHHHHHHHHHHH
Confidence 9998887 4455555444455555554444332222 1235788877776654433
No 192
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.23 E-value=4.2e-06 Score=75.86 Aligned_cols=125 Identities=22% Similarity=0.189 Sum_probs=80.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhch-hHHHH-HHHHHH-HHHHHHhhh--chhhhHHHHHHHHHhhhhhhcc
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGR-KASIL-VGGVAF-LAGSALGGA--AFNVYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GR-r~~~~-~~~~~~-~~~~~~~~~--a~~~~~li~~R~l~Gig~g~~~ 106 (319)
.++.+.+...+...++..++.++.|++.||+++ |+... ...... .++...... ..+....++.-++.|+..++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 328 (379)
T TIGR00881 249 FSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQ 328 (379)
T ss_pred CCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhh
Confidence 344566667777788889999999999998643 33222 211111 111111111 3455667777888888777766
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhhccccCCCcchHHHH
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISL 160 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f 160 (319)
+....++.|..|+++||+..+..+....+|...+. +.+... +.+||++.|
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~----~~~g~~~~f 379 (379)
T TIGR00881 329 MLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLA----DGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHH----HhhcccccC
Confidence 77778899999999999988888877777755444 333332 346787653
No 193
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.22 E-value=6.3e-06 Score=74.02 Aligned_cols=106 Identities=23% Similarity=0.285 Sum_probs=86.5
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc---hhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA---FNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a---~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.+.+.+.+...+++.++.++.|++.||+|+|+..........+........ .+....++.-++.|++.+...+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 322 (352)
T PF07690_consen 243 SQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFS 322 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566777788888889999999999999888777777777766654443 35577778889999999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGA 140 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~ 140 (319)
++.|..|+++||+..+.......+|..++
T Consensus 323 ~~~~~~~~~~~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 323 LIQELVPPEYRGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp HHHCCCHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999998888887777776544
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=98.22 E-value=5.6e-05 Score=70.82 Aligned_cols=81 Identities=22% Similarity=0.219 Sum_probs=63.8
Q ss_pred hHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh--chhhhHHHHHHHHHhhhhhhccchhhHHHHh
Q 047275 38 TTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA--AFNVYMLILGRVLLGVGIGFSNQSVPLYLSE 115 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~--a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e 115 (319)
..+.....+..+++.+++++++||+|||+.+..+.+...+......+ ..+.+.+++.-++.|++.++..+...++++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444556677789999999999999999999887766654432222 3567778888999999999999999999999
Q ss_pred cCC
Q 047275 116 MAP 118 (319)
Q Consensus 116 ~~p 118 (319)
..+
T Consensus 347 ~~d 349 (444)
T PRK09669 347 VVD 349 (444)
T ss_pred hhh
Confidence 886
No 195
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.22 E-value=1.3e-05 Score=76.28 Aligned_cols=97 Identities=16% Similarity=0.066 Sum_probs=79.8
Q ss_pred HHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchh---------hhHHHHHHHHHhhhhhhccchhhHHHHhcC
Q 047275 47 AGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFN---------VYMLILGRVLLGVGIGFSNQSVPLYLSEMA 117 (319)
Q Consensus 47 g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~---------~~~li~~R~l~Gig~g~~~~~~~~~i~e~~ 117 (319)
.+.+.+.+++++.+|++..+.+.++.++..++.+..+.+.+ .+.++..+++.|+|++...|....++.+.+
T Consensus 332 ~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~a 411 (500)
T PRK09584 332 GSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLV 411 (500)
T ss_pred HHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 33445555678888888778889999988888877666654 458999999999999999999999999999
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHH
Q 047275 118 PPKHRGAFNIGFQVCTAIGVLGANLL 143 (319)
Q Consensus 118 p~~~Rg~~~~~~~~~~~~G~~~~~~~ 143 (319)
|++.||++.+.+.+..++|..++...
T Consensus 412 P~~~rg~~~g~~~l~~a~g~~~~g~~ 437 (500)
T PRK09584 412 PQRLMGFIMGSWFLTTAGAALIAGYV 437 (500)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888886655443
No 196
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.19 E-value=1.1e-05 Score=73.14 Aligned_cols=104 Identities=13% Similarity=0.013 Sum_probs=72.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhh-chhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRAL-GRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~-GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
.+..+.+.+.+...++..++.++.|++.||+ +||+.+..+..+..++.++..+.++..... .-++.|++.|...+...
T Consensus 229 ~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~ 307 (355)
T TIGR00896 229 ASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLAL 307 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHH
Confidence 3456677788888889999999999999999 566777777777777766655554433322 34688999999988877
Q ss_pred HHHHhcCC-CCCCcchhhHHHHHHHHH
Q 047275 111 LYLSEMAP-PKHRGAFNIGFQVCTAIG 136 (319)
Q Consensus 111 ~~i~e~~p-~~~Rg~~~~~~~~~~~~G 136 (319)
..+.+..+ +++++...+..+....+|
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~~~~~ 334 (355)
T TIGR00896 308 TLIGLRSRQAAQAAALSAMAQSIGYLL 334 (355)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 77765554 456676655544433333
No 197
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.18 E-value=3.1e-05 Score=69.08 Aligned_cols=126 Identities=8% Similarity=0.012 Sum_probs=85.0
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
++++..+...+.+..+..+|.++.+++.||+|+|+.+..+..+..++.++....++... ..+=++.|++.+..+|...+
T Consensus 175 ~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s 253 (310)
T TIGR01272 175 LPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFS 253 (310)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 45667777788888888999999999999999999988888777776655544444332 23555899999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHH-HHHHHHHHhhccccCCCcchHHHHHhhH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIG-VLGANLLNYGTQKIKGGWGWRISLSMAA 164 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~gWr~~f~~~~ 164 (319)
...+..|++. +...++.. ...+| .+...+++... +..|-+..|.+..
T Consensus 254 ~a~~~~~~~~-~~asai~~-~~~~Gg~i~P~l~G~la----d~~g~~~a~~v~~ 301 (310)
T TIGR01272 254 LALNALGRHT-SQGSGILC-LAIVGGAIVPLLQGSLA----DCLGIQLAFALPV 301 (310)
T ss_pred HHHhhhhhhh-hhhHHHHH-HHHhcchHHHHHHHHHH----HhccchHHHHHHH
Confidence 9888877643 33333332 22333 23333344332 3356677665433
No 198
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.17 E-value=1.9e-05 Score=74.52 Aligned_cols=112 Identities=6% Similarity=-0.029 Sum_probs=89.3
Q ss_pred ccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh----------chhhhHHHHHHHHHhh
Q 047275 31 KFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA----------AFNVYMLILGRVLLGV 100 (319)
Q Consensus 31 ~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~----------a~~~~~li~~R~l~Gi 100 (319)
.++++..+.+.....++.++|..+.+++.+|++.|+++.++.++..++...... .++.+.++..-++.++
T Consensus 284 G~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~ 363 (468)
T TIGR00788 284 PGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEV 363 (468)
T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHH
Confidence 356777887777777899999999999999999999999999999988755321 1344456677889999
Q ss_pred hhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHH
Q 047275 101 GIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANL 142 (319)
Q Consensus 101 g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~ 142 (319)
+.|....+...++++..|++.+|...++......+|..++..
T Consensus 364 ~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 364 LAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred HHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998766666666666544443
No 199
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.13 E-value=1.9e-05 Score=72.28 Aligned_cols=142 Identities=18% Similarity=0.238 Sum_probs=103.7
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLS 114 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~ 114 (319)
+..+...+...+...+.-.+..++.+|+|.|+.++++.....+=...+++++|.+.+.+.+.+.|+-.+.....+.-|+.
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~ 338 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYIT 338 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777777888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCcchhh-HHHHHHHHHHHH-HHHHHhhccccCCCcchHHHHHhhHHHHHHHH-HhcccccCC
Q 047275 115 EMAPPKHRGAFNI-GFQVCTAIGVLG-ANLLNYGTQKIKGGWGWRISLSMAAAPASILT-LGALILPDT 180 (319)
Q Consensus 115 e~~p~~~Rg~~~~-~~~~~~~~G~~~-~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~es 180 (319)
+.+|+|..++... ..++...+|..+ ..+.++.. ++.|.+-.|.+.+...+.+. +..+.++++
T Consensus 339 ~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ly----d~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 339 AHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLY----DRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhH----hhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 9999988665332 245555666433 33444433 34688888876665544433 344445444
No 200
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.13 E-value=1.3e-05 Score=74.39 Aligned_cols=127 Identities=12% Similarity=0.072 Sum_probs=71.7
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHH-HHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKAS-ILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~-~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
....+.......+++.+|.++.|+++||+|||+. .........++..+.....+.....++=.+.++|.....+.....
T Consensus 278 ~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 357 (412)
T TIGR02332 278 NIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTT 357 (412)
T ss_pred HHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhh
Confidence 3455666777888999999999999999997764 333333333332222122221111111122233333333344455
Q ss_pred HHhcCCCCCCcchhhHHHHHHHHHHHHHHH-HHhhccccCCCc-chHHHHHhhH
Q 047275 113 LSEMAPPKHRGAFNIGFQVCTAIGVLGANL-LNYGTQKIKGGW-GWRISLSMAA 164 (319)
Q Consensus 113 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~-gWr~~f~~~~ 164 (319)
..|..|+++|+...+..+....+|...+.. .+... +.. +|++.+.+..
T Consensus 358 ~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~----~~~g~~~~~~~~~~ 407 (412)
T TIGR02332 358 PDQSISLQARAIAIAVINATGNIGSALSPFLIGILK----DATGSFNSGLWFVA 407 (412)
T ss_pred cccccchHHHHHHHHHHHHhhhhhhhhhhhhccccc----ccCCCCchhHHHHH
Confidence 567889999998877777666666554433 33322 223 4777665443
No 201
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.12 E-value=4.3e-05 Score=70.05 Aligned_cols=132 Identities=10% Similarity=-0.019 Sum_probs=84.4
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG-AAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~-~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
.++++.+.+.+...++..++.++.|++.||+|||+.+..+..+..++.++.. ..++.+...+.-++.|.+.++..++..
T Consensus 232 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 311 (382)
T PRK10091 232 FSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQ 311 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 3456677777888889999999999999999999999988887777765543 345556667777778887766555444
Q ss_pred H-HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH-HhhccccCCCcchHHHHHhhHHHHH
Q 047275 111 L-YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL-NYGTQKIKGGWGWRISLSMAAAPAS 168 (319)
Q Consensus 111 ~-~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~gWr~~f~~~~~~~~ 168 (319)
. ...+..|++.++... ......+|...+... ++..+ ...+|+..+.+..+...
T Consensus 312 ~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~---~~~~~~~~~~~~~~~~~ 366 (382)
T PRK10091 312 ILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLT---LGLAYNYVALPAALLSF 366 (382)
T ss_pred HHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHH---cccCcchHHHHHHHHHH
Confidence 3 344444555566431 233344554443333 22222 12568777766554433
No 202
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.11 E-value=7.3e-05 Score=68.71 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=69.6
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
++.+.+.......++..++.++.+++.||+|||+.+..+..+..++..+..+.++....+..-.+.+.|.+...+. ..
T Consensus 237 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~ 314 (392)
T PRK10473 237 SRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV--AM 314 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HH
Confidence 4455666667777888899999999999999999999999988888877777666555555555555555544433 34
Q ss_pred HHhcCCCCCCc-chhhHHHHHHHHHHH
Q 047275 113 LSEMAPPKHRG-AFNIGFQVCTAIGVL 138 (319)
Q Consensus 113 i~e~~p~~~Rg-~~~~~~~~~~~~G~~ 138 (319)
..+..|.++|+ ...+....+..+|..
T Consensus 315 ~~~~~~~~~~~g~~~~~~~~~~~~g~~ 341 (392)
T PRK10473 315 SQALGPFSLRAGVASSTLGIAQVCGSS 341 (392)
T ss_pred HHHhccCcccccHHHHHHHHHHHHHHH
Confidence 45556665554 344444444444433
No 203
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.10 E-value=6.3e-05 Score=71.13 Aligned_cols=83 Identities=12% Similarity=0.195 Sum_probs=64.6
Q ss_pred hhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh-----chhhhHHHHHHHHHhhhhhhccchhh
Q 047275 36 LLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA-----AFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 36 ~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~-----a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
..+.+.....++.+++.+++++++||+|||+.+..+..+..++.+.... ..+.+.+++.=++.|++.+...+...
T Consensus 267 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~ 346 (473)
T PRK10429 267 LFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQV 346 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555777899999999999999999999888776666544322 34566777777899999999999999
Q ss_pred HHHHhcCC
Q 047275 111 LYLSEMAP 118 (319)
Q Consensus 111 ~~i~e~~p 118 (319)
++++|..|
T Consensus 347 am~ad~id 354 (473)
T PRK10429 347 IMVADTVD 354 (473)
T ss_pred HHHhhhhh
Confidence 99999876
No 204
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.10 E-value=5.2e-05 Score=60.12 Aligned_cols=102 Identities=23% Similarity=0.214 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCC
Q 047275 42 SSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKH 121 (319)
Q Consensus 42 ~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~ 121 (319)
+.......+.+++.+.+.+++|.|+.++++.+.+.+-... -+.++.+.++.+-.+.|++.+..++....|+.+..++++
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~ 122 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET 122 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH
Confidence 4444455678888889999999999999999988865443 467888999999999999999999999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHH
Q 047275 122 RGAFNIGFQVCTAIGVLGANLLN 144 (319)
Q Consensus 122 Rg~~~~~~~~~~~~G~~~~~~~~ 144 (319)
|++..+++-.....+.+.+.+..
T Consensus 123 ~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 123 IGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHH
Confidence 99866555444444555554443
No 205
>PRK10133 L-fucose transporter; Provisional
Probab=98.09 E-value=5.9e-05 Score=70.61 Aligned_cols=127 Identities=6% Similarity=-0.023 Sum_probs=87.5
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
+++.+.+.....+.+++.+|.++.|++.||+|||+++..+.++..++..+..+.++.. -+..=.+.|++.+..+|....
T Consensus 292 ~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P~~~s 370 (438)
T PRK10133 292 MTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYPTIFS 370 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHHH
Confidence 4566777778888889999999999999999999999888777766665555555532 245567899999999999999
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcc-hHHHHHhhH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWG-WRISLSMAA 164 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~ 164 (319)
...|..|++ .+...++.......|.+++.+++...+ ..| =|..|.+..
T Consensus 371 ~a~~~~~~~-~~~as~l~~~~~~g~~~~~~i~G~l~~----~~g~~~~~~~v~~ 419 (438)
T PRK10133 371 LGIKNLGQD-TKYGSSFIVMTIIGGGIVTPVMGFVSD----AAGNIPTAELIPA 419 (438)
T ss_pred HHHcccchh-hccchhHHhHHhccchHHHHHHHHHHH----hccchHHHHHHHH
Confidence 999987764 444444444333223444445554332 234 455555433
No 206
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.08 E-value=5e-05 Score=71.55 Aligned_cols=144 Identities=17% Similarity=0.109 Sum_probs=79.9
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHH--------HHHHHHHHHH--HHHhhh-chhhhHHHHHHHHHhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASI--------LVGGVAFLAG--SALGGA-AFNVYMLILGRVLLGV 100 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~--------~~~~~~~~~~--~~~~~~-a~~~~~li~~R~l~Gi 100 (319)
++..+.+...+...+++.++.++.|+++||+++|+.. ..+......+ .++... ..+....++.=.+.|.
T Consensus 294 ~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 373 (465)
T TIGR00894 294 VSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANA 373 (465)
T ss_pred cChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 3456677778888999999999999999998765321 1111111111 111111 2233344444455555
Q ss_pred hhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 047275 101 GIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYGTQKIKGGWGWRISLSMAAAPASILTLGALIL 177 (319)
Q Consensus 101 g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l 177 (319)
+.++..+.......|..|+ .+|...++.+....+|..+.+ +.++..+. .+..+|+..|.+.+...++..+.....
T Consensus 374 ~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~-~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 374 VSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQ-DSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCC-CCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 5555555444455566654 778777777666666544433 33333221 111348888887776655544444443
No 207
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.05 E-value=1.7e-05 Score=75.23 Aligned_cols=145 Identities=14% Similarity=0.068 Sum_probs=115.2
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhc--hhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALG--RKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~G--Rr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~ 109 (319)
++.++.+...+..-+...+|.++.|+++|+.. ++.++.++++...++.+.+.++++++.++..-.+.|+..|...+..
T Consensus 330 ~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~ 409 (509)
T KOG2504|consen 330 LSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLT 409 (509)
T ss_pred CChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677778888888888999999999999988 5567777777777788889999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhccccc
Q 047275 110 PLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILP 178 (319)
Q Consensus 110 ~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~ 178 (319)
...+.|..+.++-..+.++..+..+++.+.+..+.....+..+ .|...|...++..++....+...+
T Consensus 410 ~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg--~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 410 PVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG--NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC--CeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999998887777778888888887666544433333332 388888888877666555554444
No 208
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.03 E-value=2.3e-05 Score=73.07 Aligned_cols=102 Identities=18% Similarity=0.216 Sum_probs=84.5
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhch--hhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAF--NVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~--~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+..+.+.....++..++.+++++++||+|||+++..+.++..++.++..+.+ |.+.+++.-++.|++.|+......++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 4566677778889999999999999999999999999999999998887775 99999999999999999999999999
Q ss_pred HHhcCCCC-------CCcchhhHHHHHHHHH
Q 047275 113 LSEMAPPK-------HRGAFNIGFQVCTAIG 136 (319)
Q Consensus 113 i~e~~p~~-------~Rg~~~~~~~~~~~~G 136 (319)
++|..+.+ +.|...+......-+|
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~ 370 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIG 370 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHH
Confidence 99988743 2344454544444444
No 209
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.99 E-value=0.0027 Score=59.06 Aligned_cols=88 Identities=20% Similarity=0.192 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCC
Q 047275 41 TSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPK 120 (319)
Q Consensus 41 ~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~ 120 (319)
.+..+....+.+++.+.+.|..|.|..+.++..++....... +-+|-+.++++-.+.|+|.+..+..-..|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf-l~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF-LFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH-HhcchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 444555567888999999999999999999999887765433 4567889999999999999999999999999999999
Q ss_pred CCcchhhHH
Q 047275 121 HRGAFNIGF 129 (319)
Q Consensus 121 ~Rg~~~~~~ 129 (319)
.+.+..++.
T Consensus 135 tie~Nisi~ 143 (461)
T KOG3098|consen 135 TIERNISIF 143 (461)
T ss_pred hHHHHHHHH
Confidence 888754433
No 210
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.96 E-value=0.00018 Score=66.44 Aligned_cols=126 Identities=19% Similarity=0.276 Sum_probs=87.7
Q ss_pred HHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc-hhhhHHH----HHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 44 PFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA-FNVYMLI----LGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a-~~~~~li----~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
..+...+.-++.+++..|+|-|++++++.+...+=..+.+.. ++.+... ..-.++|+.-|........|+.|.+|
T Consensus 252 ~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p 331 (400)
T PF03825_consen 252 GVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAP 331 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCC
Confidence 334444555678999999999999999999999988887776 5544433 33456999999999999999999999
Q ss_pred CCCCcchhhHHHH-HHHHHHHHHHHH-HhhccccC--CCcchHHHHHhhHHHHHH
Q 047275 119 PKHRGAFNIGFQV-CTAIGVLGANLL-NYGTQKIK--GGWGWRISLSMAAAPASI 169 (319)
Q Consensus 119 ~~~Rg~~~~~~~~-~~~~G~~~~~~~-~~~~~~~~--~~~gWr~~f~~~~~~~~~ 169 (319)
++.|+...++... ..++|...+..+ ++..+... ..+.|...+.+.+...++
T Consensus 332 ~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~ 386 (400)
T PF03825_consen 332 PELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALV 386 (400)
T ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHH
Confidence 9999987776544 345665544433 33332211 124566666665554444
No 211
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.92 E-value=0.00032 Score=67.05 Aligned_cols=86 Identities=12% Similarity=0.023 Sum_probs=58.2
Q ss_pred HHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhh-------------hHHHHHHHHHhhhhhhccchhhH
Q 047275 45 FIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNV-------------YMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 45 ~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~-------------~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
.+-..++..+...+.||+|||+.++.+...+.++.++.+..... ..+...=+.......+..+....
T Consensus 339 ~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~ 418 (513)
T KOG0254|consen 339 GVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWV 418 (513)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhh
Confidence 33445677777999999999999999999999998876644211 12222223333333334455567
Q ss_pred HHHhcCCCCCCcchhhHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQ 130 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~ 130 (319)
+.+|.+|.+.|+...++..
T Consensus 419 ~~sEifp~~~r~~~~s~~~ 437 (513)
T KOG0254|consen 419 IVSEIFPLRLRSKGASLAV 437 (513)
T ss_pred hhhccCcHhHHhhhHHHHH
Confidence 8899999999998654443
No 212
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.91 E-value=0.00014 Score=68.77 Aligned_cols=126 Identities=13% Similarity=0.029 Sum_probs=86.4
Q ss_pred hHHhHHHHHHHHHHHhhhh----hhhhh-hchhHH--HHHHHHHHHHHHHHhhh---------chhhhHHHHHHHHHhhh
Q 047275 38 TTFTSSPFIAGLIASLFAS----KVTRA-LGRKAS--ILVGGVAFLAGSALGGA---------AFNVYMLILGRVLLGVG 101 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g----~l~dr-~GRr~~--~~~~~~~~~~~~~~~~~---------a~~~~~li~~R~l~Gig 101 (319)
+++.+...+..++..++.. ++.+| .+.+.. +.++.++..++....++ ..|++.++...++.|+|
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~g 394 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLG 394 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 3445555555555554444 44443 222333 35666666666555543 46899999999999999
Q ss_pred hhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHH
Q 047275 102 IGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAP 166 (319)
Q Consensus 102 ~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~ 166 (319)
+....|....+++|.+|++.||.+.+...+...+|..++..+...... ..+|...|...++.
T Consensus 395 e~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~---~~~~~~~~~~~~~~ 456 (475)
T TIGR00924 395 ELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAV---PQGVTGVFGKIGLV 456 (475)
T ss_pred HHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccchhhHHHHHHHH
Confidence 999999999999999999999999999999999987766554432221 23576666554443
No 213
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.84 E-value=0.00034 Score=63.65 Aligned_cols=137 Identities=13% Similarity=0.064 Sum_probs=97.1
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALG-GAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~-~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
++.+..++.--.+-+++.+|+.+.|+++|| +.|+.+.....+..+..+.. ....+.+..++.=++-|++.+.....-.
T Consensus 244 ~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~ 322 (394)
T COG2814 244 FSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQ 322 (394)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHH
Confidence 456777788888888999999999999999 88888888877777766554 4455666677777778888777666666
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHh
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLG 173 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~ 173 (319)
.-+++ .-|+.++...++......+|+-.+..++... .+++|+....+.+++..++....
T Consensus 323 ~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v---~~~~g~~~~~~~~a~l~~~a~~~ 381 (394)
T COG2814 323 TRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLV---LDALGYAATGWVGAALLLLALLL 381 (394)
T ss_pred HHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhchHHHHHHHHHHHHHHHHH
Confidence 66666 4467777777777777777765554443322 12378988888877766554443
No 214
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.80 E-value=0.00054 Score=62.66 Aligned_cols=133 Identities=13% Similarity=0.023 Sum_probs=72.6
Q ss_pred hHHhHHHHHHHHHHHhhhhhhhhhhchh---HHHHH-HHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 38 TTFTSSPFIAGLIASLFASKVTRALGRK---ASILV-GGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g~l~dr~GRr---~~~~~-~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
+.......+.+.++ .++++||..|| +.... ..+...+...+.+...+....++.=.+.|++..+..+....+.
T Consensus 229 ~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 305 (368)
T TIGR00903 229 GDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWI 305 (368)
T ss_pred HHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 33344444444444 47777777654 33222 2222233333333344444445555677787887878888899
Q ss_pred HhcCCCCCCcchhhHHHHHHHHHHH-HHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 047275 114 SEMAPPKHRGAFNIGFQVCTAIGVL-GANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPD 179 (319)
Q Consensus 114 ~e~~p~~~Rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~e 179 (319)
+|.+|++.||+..+.......+|.+ ...+.+.... +-+..|.+.+.+.++..+....+++
T Consensus 306 ~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~------~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 306 GKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS------SAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999987777665555543 3333333221 3344454445554444333333343
No 215
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.79 E-value=0.00082 Score=62.52 Aligned_cols=80 Identities=18% Similarity=0.247 Sum_probs=68.4
Q ss_pred HHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--hhhhHHHHHHHHHhhhhhhccchhhHHHHhc
Q 047275 39 TFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--FNVYMLILGRVLLGVGIGFSNQSVPLYLSEM 116 (319)
Q Consensus 39 ~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~ 116 (319)
........+.+++.+++.++++|+|+|+++.++.++..++..+.-+. .+.+.+++..++.++|.+...+...++++|.
T Consensus 276 ~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~ 355 (467)
T COG2211 276 LLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADT 355 (467)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcch
Confidence 34455555666779999999999999999999999999998876665 4789999999999999999999999999877
Q ss_pred CC
Q 047275 117 AP 118 (319)
Q Consensus 117 ~p 118 (319)
.+
T Consensus 356 vD 357 (467)
T COG2211 356 VD 357 (467)
T ss_pred hh
Confidence 65
No 216
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.79 E-value=0.00067 Score=62.36 Aligned_cols=111 Identities=19% Similarity=0.108 Sum_probs=75.1
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHH-HHHHHhhh--chhhhHHHHHHHHHhhhhhhccchh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFL-AGSALGGA--AFNVYMLILGRVLLGVGIGFSNQSV 109 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~-~~~~~~~~--a~~~~~li~~R~l~Gig~g~~~~~~ 109 (319)
++.+.+.+.....++.++|+++.+++.||+||+........... +....... ..+.+.+++..++.|++.+...+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 320 (394)
T PRK11652 241 SSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLA 320 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666777888899999999999984433322221111 11111111 2456778888999999999999999
Q ss_pred hHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 047275 110 PLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLN 144 (319)
Q Consensus 110 ~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 144 (319)
..+..|..| +++|...++.+....+|...+..+.
T Consensus 321 ~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~ 354 (394)
T PRK11652 321 TSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLS 354 (394)
T ss_pred HHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887 5788887777777777765555443
No 217
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.73 E-value=0.014 Score=54.97 Aligned_cols=109 Identities=11% Similarity=0.041 Sum_probs=76.9
Q ss_pred chhhHHhHHHHHHHHH-HHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--h-------------------------
Q 047275 35 QLLTTFTSSPFIAGLI-ASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--F------------------------- 86 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~i-g~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--~------------------------- 86 (319)
+...++-+..++-+.+ ..++.+++++|++|++.+-.....|...-.+.++. +
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~ 122 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGF 122 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHH
Confidence 4555555555554444 48889999999999999888888777766554443 1
Q ss_pred ----hhhHHHHHHHHHhhhhhhccc-hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 047275 87 ----NVYMLILGRVLLGVGIGFSNQ-SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL 143 (319)
Q Consensus 87 ----~~~~li~~R~l~Gig~g~~~~-~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 143 (319)
+.|...+.-+...+-.....+ .-..+++|.++.++-.+.-+.++++..+|.+.++.+
T Consensus 123 i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 123 IAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233444555555565555565 667889999998888888888999999987766543
No 218
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.72 E-value=9.8e-05 Score=66.92 Aligned_cols=98 Identities=16% Similarity=0.096 Sum_probs=68.2
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--h--hhhHHHHHHHHHhhhhhhccch
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--F--NVYMLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--~--~~~~li~~R~l~Gig~g~~~~~ 108 (319)
++.+.+.+.+...+++.++.++.|++.||+|||+.+..+......+..+..+. . +.+.+.+.-++.+++.|...+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 338 (366)
T TIGR00886 259 SKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGS 338 (366)
T ss_pred cHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccch
Confidence 34556666777777888999999999999999988877776666655544332 2 5555555555566666666666
Q ss_pred hhHHHHhcCCCCCCcchhhHHHH
Q 047275 109 VPLYLSEMAPPKHRGAFNIGFQV 131 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~~~~ 131 (319)
...++.|..| +++|...+..+.
T Consensus 339 ~~~~~~~~~~-~~~g~~~g~~~~ 360 (366)
T TIGR00886 339 TFALVPHIFR-RATGAVSGLVGA 360 (366)
T ss_pred hhhcchhhch-hhcccHHHHHHH
Confidence 6677788776 678876665543
No 219
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.64 E-value=2.8e-06 Score=79.59 Aligned_cols=132 Identities=16% Similarity=0.180 Sum_probs=74.2
Q ss_pred HHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh--h--c-h-----hhhHHHHHHHHHhhhhhhccchhhHHHHhc
Q 047275 47 AGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG--A--A-F-----NVYMLILGRVLLGVGIGFSNQSVPLYLSEM 116 (319)
Q Consensus 47 g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~--~--a-~-----~~~~li~~R~l~Gig~g~~~~~~~~~i~e~ 116 (319)
...++.++...+.||+|||+.++.+.....++.+..+ . . . +...+...-...-....+..+....+.+|.
T Consensus 298 ~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~El 377 (451)
T PF00083_consen 298 VNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAEL 377 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccc
Confidence 3456667777999999999999999888877776654 1 1 1 222222222111111113345556888999
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcc-hHHHHHhhHHHHHHHHHhcccccCCh
Q 047275 117 APPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWG-WRISLSMAAAPASILTLGALILPDTP 181 (319)
Q Consensus 117 ~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~l~es~ 181 (319)
+|.+.|+...+......-++ +.+.+.......+..+ |.......++..+...+...++||+.
T Consensus 378 fPt~~R~~~~~~~~~~~~i~---~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 378 FPTKVRSTGIGLSYAVGRIG---GFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETK 440 (451)
T ss_pred cccccccccccccccccccc---ccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCC
Confidence 99999998655554333333 2222222222222223 43333344444444556678899994
No 220
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.63 E-value=4e-05 Score=70.00 Aligned_cols=130 Identities=18% Similarity=0.132 Sum_probs=88.1
Q ss_pred HHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhh--------hHHHHHHHHHhhhhhhccchhhHHHHhcCCCC
Q 047275 49 LIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNV--------YMLILGRVLLGVGIGFSNQSVPLYLSEMAPPK 120 (319)
Q Consensus 49 ~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~--------~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~ 120 (319)
+.|-.+...+.|+.|||+..+.+.+++.+..+..+...|. ....+.-++.=+| -..++-++-+|.+|.+
T Consensus 362 vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FPar 438 (538)
T KOG0252|consen 362 VPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPAR 438 (538)
T ss_pred CCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHH
Confidence 4577788899999999999999999999999988888772 1222233333333 3344455668999999
Q ss_pred CCcchhhHHHHHHHHHHHHHH-HHHhhcc-ccCCCcchHHHHHhhHHHHHHHHHhcccccCCh
Q 047275 121 HRGAFNIGFQVCTAIGVLGAN-LLNYGTQ-KIKGGWGWRISLSMAAAPASILTLGALILPDTP 181 (319)
Q Consensus 121 ~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~-~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~ 181 (319)
.||.+-++.....-+|.+++. ...+..+ ......+-|..|++.+....+..+..+++||+.
T Consensus 439 vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 439 VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeeccc
Confidence 999877666555545544333 2233222 111135678888887777777778888899884
No 221
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.62 E-value=0.00017 Score=50.65 Aligned_cols=74 Identities=14% Similarity=0.210 Sum_probs=64.3
Q ss_pred hhhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHH
Q 047275 13 FPEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLI 92 (319)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li 92 (319)
+.|+.|.|.+|.+ ++.++.+++.+.+++|.++|++...++.++..+++.+..+.+...+..+.+++..+.+.+.
T Consensus 11 yTplLP~M~~~~~------ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 11 YTPLLPLMQADGG------LSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHhHhHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 4677788877765 4578999999999999999999999999998889999999999999999999988876653
No 222
>PRK11043 putative transporter; Provisional
Probab=97.61 E-value=0.0025 Score=58.71 Aligned_cols=112 Identities=12% Similarity=-0.059 Sum_probs=74.3
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHh---hh--chhhhHHHHHHHHHhhhhhhccc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALG---GA--AFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~---~~--a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
++.+.+.......++..+|.++.+++.||+|||+.+........++.... .. .++...+++.-.+.|++.+...+
T Consensus 236 s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
T PRK11043 236 SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYP 315 (401)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555566778899999999999999987766555444443321 11 34555566677888999999998
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHH-HHHHHHHHh
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIG-VLGANLLNY 145 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G-~~~~~~~~~ 145 (319)
.......|..| ++||...+........+ ...+.+.+.
T Consensus 316 ~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~ 353 (401)
T PRK11043 316 IVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSA 353 (401)
T ss_pred HHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777765 57898777766554433 333344443
No 223
>PRK11462 putative transporter; Provisional
Probab=97.56 E-value=0.0043 Score=58.51 Aligned_cols=81 Identities=12% Similarity=0.007 Sum_probs=53.9
Q ss_pred hHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--hhhhHHHHHHHHHhhhhhhccchhhHHHHh
Q 047275 38 TTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--FNVYMLILGRVLLGVGIGFSNQSVPLYLSE 115 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--~~~~~li~~R~l~Gig~g~~~~~~~~~i~e 115 (319)
+.+.....++.++|.+++++++||+|+|+++..+.....+..++..+. .+...+++.=++.|++.++..+....+++|
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad 345 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSD 345 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555667778899999999999999998876555444433333222 222234445567788887777766777777
Q ss_pred cCC
Q 047275 116 MAP 118 (319)
Q Consensus 116 ~~p 118 (319)
..+
T Consensus 346 ~~d 348 (460)
T PRK11462 346 TVD 348 (460)
T ss_pred hHh
Confidence 655
No 224
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.54 E-value=0.00086 Score=46.43 Aligned_cols=65 Identities=18% Similarity=0.334 Sum_probs=50.3
Q ss_pred HhhhhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 250 QQLTGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
..++....+..|.|.++++.|.+..+.- +...+.-.+++++.++.|.++||++|++..+.+..++
T Consensus 11 ~~f~~~g~~~Pfl~~~~~~~Gl~~~~iG-il~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLKQLGLSPSQIG-ILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHhhhhHhhhhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3444555666788888998888876544 5555667889999999999999999999887776655
No 225
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.52 E-value=0.0011 Score=62.95 Aligned_cols=107 Identities=14% Similarity=0.102 Sum_probs=81.6
Q ss_pred hHHhHHHHHHHHHHHhhhhhhhhhhchhHH-------HHHHHHHHHHHHHHh-----hh-----chhhhHHHHHHHHHhh
Q 047275 38 TTFTSSPFIAGLIASLFASKVTRALGRKAS-------ILVGGVAFLAGSALG-----GA-----AFNVYMLILGRVLLGV 100 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~-------~~~~~~~~~~~~~~~-----~~-----a~~~~~li~~R~l~Gi 100 (319)
+++.+...+..++.+++.+++.||.|||+. +.++.++..++.+.. .. ..+.+.++..-+++|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 344455556677888889999999999973 555555555443211 11 2457788899999999
Q ss_pred hhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 047275 101 GIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLN 144 (319)
Q Consensus 101 g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 144 (319)
|++...++...++.+.+|++.+|..++.+.+...+|..++..++
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVA 435 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888866665544
No 226
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.50 E-value=0.0025 Score=60.13 Aligned_cols=136 Identities=15% Similarity=0.059 Sum_probs=96.9
Q ss_pred HHHHHHHHhhhhhhhhhhc-hhHHHHHHHHHHHHHHHHhhhchh---------------------hhHHHHHHHHHhhhh
Q 047275 45 FIAGLIASLFASKVTRALG-RKASILVGGVAFLAGSALGGAAFN---------------------VYMLILGRVLLGVGI 102 (319)
Q Consensus 45 ~~g~~ig~~~~g~l~dr~G-Rr~~~~~~~~~~~~~~~~~~~a~~---------------------~~~li~~R~l~Gig~ 102 (319)
.+-..+.+++..++.+++| ||+++..+.++..++.....+..+ .+..++.-.+.|+.-
T Consensus 315 s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~ 394 (477)
T TIGR01301 315 SVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPL 394 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHH
Confidence 3333477778889999999 578889998888887766654432 267778889999999
Q ss_pred hhccchhhHHHHhcCCC--CCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHH-hcccccC
Q 047275 103 GFSNQSVPLYLSEMAPP--KHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTL-GALILPD 179 (319)
Q Consensus 103 g~~~~~~~~~i~e~~p~--~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~e 179 (319)
+..++.-.+++++..|+ ++.|.++++.+.+..+.+++..+.........++ +=...+.++++..++..+ ..+.+|+
T Consensus 395 A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~-~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 395 AITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG-GNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC-CCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999995 4558899999999999977666433222222221 234566777777666444 4555676
Q ss_pred Ch
Q 047275 180 TP 181 (319)
Q Consensus 180 s~ 181 (319)
.+
T Consensus 474 ~~ 475 (477)
T TIGR01301 474 PR 475 (477)
T ss_pred CC
Confidence 64
No 227
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.49 E-value=0.00025 Score=66.10 Aligned_cols=131 Identities=15% Similarity=0.198 Sum_probs=98.9
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
+...+........|-++.=++.+++-.++||-+++..++.++.+=-+......|.|+.+-.-+++|+..+..+.++.+|+
T Consensus 405 ~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~ 484 (618)
T KOG3762|consen 405 KTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYA 484 (618)
T ss_pred ceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHH
Confidence 34444455556667677778889999999999999999999999988889999999999999999999999999999999
Q ss_pred HhcCCCCCCcchhhHHHH-----HHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH
Q 047275 114 SEMAPPKHRGAFNIGFQV-----CTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT 171 (319)
Q Consensus 114 ~e~~p~~~Rg~~~~~~~~-----~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 171 (319)
+..+||+.|....++.+. +-++|.+++..+ +. .++=|..|...++.+++.+
T Consensus 485 s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~---v~----~fg~~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 485 SHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFV---VE----RFGARTTFRIFGIACLVTL 540 (618)
T ss_pred HhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhh---he----eehhHHHHHHHHHHHHHHH
Confidence 999999999876555432 223444333322 11 2455667766665554433
No 228
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.43 E-value=0.0019 Score=60.51 Aligned_cols=74 Identities=16% Similarity=0.021 Sum_probs=47.1
Q ss_pred HHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh------chhhhHHHHHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 45 FIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA------AFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 45 ~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~------a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
.+.+.++.+++|+++||+|+|++++++.....++...... ..+++.+.+.-+...++.|.....+.-++.+.+|
T Consensus 296 ~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~ 375 (462)
T PRK15034 296 PFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFR 375 (462)
T ss_pred HHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHh
Confidence 3445677789999999999999999888877776543211 1245555555444444444444455555555555
No 229
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.42 E-value=0.00063 Score=61.71 Aligned_cols=129 Identities=14% Similarity=0.083 Sum_probs=78.9
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhch-----------hhhHHHHHHHHHhhh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAF-----------NVYMLILGRVLLGVG 101 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~-----------~~~~li~~R~l~Gig 101 (319)
++...+.+++...+-+.+.-+..|+++||+|.+|+.+.......++..+-++.. .+..++...+..|+|
T Consensus 252 ~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~G 331 (417)
T COG2223 252 SPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLG 331 (417)
T ss_pred ChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccC
Confidence 345566666666666677778899999999999999998888888777655442 334567778888888
Q ss_pred hhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHH-HHHHHHHhhccccCCCcchHHHHHhhHHHHHH
Q 047275 102 IGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGV-LGANLLNYGTQKIKGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 102 ~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~ 169 (319)
.|..+-..+.+- |+ +-|...++......+|. ......+...+. . -.|...|.+-....++
T Consensus 332 nGsvfk~Ip~if----~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~-t--g~~~~~f~~~~~~~~~ 392 (417)
T COG2223 332 NGSVFKMIPVIF----PK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDL-T--GSYTGAFMLLLAFYLV 392 (417)
T ss_pred cchheeechHHH----Hh-hhhHHHHHHHHhccccccchhHHHHHHHHh-c--ccHHHHHHHHHHHHHH
Confidence 887776666553 33 33444444444444431 111222222111 1 1477777654444333
No 230
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.39 E-value=0.0024 Score=57.02 Aligned_cols=132 Identities=14% Similarity=0.095 Sum_probs=95.1
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhh-hchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRA-LGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr-~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
+++++.+...+...+.++..++....+.+| -.+|+......+++.++..-..+.+....+.- -++.|+|.|+..+...
T Consensus 240 ~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL 318 (395)
T COG2807 240 LSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLAL 318 (395)
T ss_pred CCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHH
Confidence 356788888888888889999998888884 66778888888888888777667765544443 3999999999999999
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCC-cchHHHHHhhHHH
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGG-WGWRISLSMAAAP 166 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~gWr~~f~~~~~~ 166 (319)
..+.+-++..++. .......+++|+++.....+..+.++|. -+|+.+...-...
T Consensus 319 ~li~~rs~~a~~A--a~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~ 373 (395)
T COG2807 319 TLILLRSSDAAIA--AALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALA 373 (395)
T ss_pred HHHHhhcCChHHH--HHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHH
Confidence 9999887655554 2344555777777666655555444332 4788776544433
No 231
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.30 E-value=0.0034 Score=60.13 Aligned_cols=130 Identities=18% Similarity=0.116 Sum_probs=93.0
Q ss_pred HHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhh---HHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchh
Q 047275 50 IASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVY---MLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFN 126 (319)
Q Consensus 50 ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~---~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~ 126 (319)
.+....+...|++|||.....+.++..++.++.+...+.. ...+.-.+...+.+........+.+|..|...|+...
T Consensus 365 p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~ 444 (521)
T KOG0255|consen 365 PAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAV 444 (521)
T ss_pred hHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 4445567999999999999999999999999888776554 3677777777888888888899999999999999888
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChh
Q 047275 127 IGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPN 182 (319)
Q Consensus 127 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~ 182 (319)
+.......+|.+.+..+........+ .+.... ...+..+...+...++||+..
T Consensus 445 ~~~~~~~~~~~i~ap~~~~~~~~~~~--~~~~~~-~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 445 GAISAAARLGSILAPLFPLLLRQMFP--LLGLIL-FGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc--cchHHH-HHHHHHHHHHHHHhcCcccCC
Confidence 88888888887776666543332211 121111 223333334444578899854
No 232
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.25 E-value=0.002 Score=55.75 Aligned_cols=132 Identities=10% Similarity=0.045 Sum_probs=88.0
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
+++...+.+.+....-..+.++++|.+.|+.||+...+.+.....+.+= +.+..+++.=.++-.+.|+...........
T Consensus 297 lS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H-~~l~Ft~lsPy~~m~~lGLsysllAcslWP 375 (459)
T KOG4686|consen 297 LSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGH-SGLFFTFLSPYTSMTFLGLSYSLLACSLWP 375 (459)
T ss_pred CChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHh-hhHHhhhccHHHHHHHHhhhHHHHHHHHhh
Confidence 3456667777777777889999999999999999776666554444321 122333444455666788888877777777
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAA 164 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~ 164 (319)
.++-..|+++-|+.-+..+.-..+|.....++...+.+-.+++.|--.|.+..
T Consensus 376 ~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 376 CVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLII 428 (459)
T ss_pred hhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHH
Confidence 88888999999987777777777775555544433333333355654554433
No 233
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.22 E-value=0.018 Score=53.80 Aligned_cols=144 Identities=15% Similarity=0.199 Sum_probs=84.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhc----hhHH-HHHHHHHHHHHHHHhhh----chhhhHHHHHHHHHhhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALG----RKAS-ILVGGVAFLAGSALGGA----AFNVYMLILGRVLLGVGI 102 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~G----Rr~~-~~~~~~~~~~~~~~~~~----a~~~~~li~~R~l~Gig~ 102 (319)
+++.+.+.+.+...+- ...-++.|.++|-+- ||+- ++++.++..++....+. ..+.....+.=++..+|.
T Consensus 22 ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~ 100 (433)
T PF03092_consen 22 LSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGY 100 (433)
T ss_pred CCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHH
Confidence 3455555555544444 355678899999874 4444 44444444333333332 235666677778889999
Q ss_pred hhccchhhHHHHhcCC--CCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 047275 103 GFSNQSVPLYLSEMAP--PKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPD 179 (319)
Q Consensus 103 g~~~~~~~~~i~e~~p--~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~e 179 (319)
...-..+-.+++|... |+.||...+.......+|.+.+..++.. ..+..++|..|.+......+..+...++.|
T Consensus 101 a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~---l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 101 AFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGP---LLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred HHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhh---hhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 9999999999999984 3335665556566666676655544322 223356777777655444443333333333
No 234
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.21 E-value=0.0034 Score=58.28 Aligned_cols=106 Identities=8% Similarity=-0.017 Sum_probs=76.2
Q ss_pred HhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCC
Q 047275 40 FTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPP 119 (319)
Q Consensus 40 ~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~ 119 (319)
..+....+..+|.++.+++.||+++|+++.++.....+..++....++... ...=++.|++.++.+|+......+..++
T Consensus 274 ~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~ 352 (410)
T TIGR00885 274 YNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQ 352 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 444455666899999999999999999998888888888777777766544 5777888999999999999999999887
Q ss_pred CCCcchhhHHHHHHHHH-HHHHHHHHhhcc
Q 047275 120 KHRGAFNIGFQVCTAIG-VLGANLLNYGTQ 148 (319)
Q Consensus 120 ~~Rg~~~~~~~~~~~~G-~~~~~~~~~~~~ 148 (319)
+.+.. ......+. +| .+...+.++..+
T Consensus 353 ~~~~~-s~~l~~~~-~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 353 DTKYG-AAGLVMAI-IGGGIVPPLQGFIID 380 (410)
T ss_pred hhhhh-HHHHHHHH-hccchHHHHHHHHHH
Confidence 76532 22222222 43 344455555443
No 235
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.08 E-value=0.017 Score=52.68 Aligned_cols=140 Identities=17% Similarity=0.167 Sum_probs=101.7
Q ss_pred cccCcchhhHHhHHHHHHHHHHHhhhhhhhh-hhchhHHHHHHHHHHHHHHHH---hhhchhhhHHHHHHHHHhhhhhhc
Q 047275 30 CKFNSQLLTTFTSSPFIAGLIASLFASKVTR-ALGRKASILVGGVAFLAGSAL---GGAAFNVYMLILGRVLLGVGIGFS 105 (319)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~d-r~GRr~~~~~~~~~~~~~~~~---~~~a~~~~~li~~R~l~Gig~g~~ 105 (319)
+.++..+.+.++..+-.|.++|-...|++.. |.++|+.-.+++..-.++-.+ .+...+.+.+..+=++.|++.|..
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLF 318 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHH
Confidence 5566788889999999999999999998887 677777666666655555433 444568889999999999999999
Q ss_pred cchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcc----cc---CCCcchHHHHHhhHHHHHH
Q 047275 106 NQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQ----KI---KGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 106 ~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~----~~---~~~~gWr~~f~~~~~~~~~ 169 (319)
...+.+.+.|..++++-|.+.+.+...+++..-++..++.... .. .+..++-..|.+..+..++
T Consensus 319 ~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~ 389 (403)
T PF03209_consen 319 TVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLA 389 (403)
T ss_pred HHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999998877777776665322222221111 11 1335788888887765444
No 236
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.07 E-value=0.0036 Score=59.30 Aligned_cols=68 Identities=13% Similarity=0.228 Sum_probs=47.8
Q ss_pred HHhhhhhhHhHhhhHHHHHh-cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHhhHHhhh
Q 047275 249 FQQLTGINVISFYAPVLFRT-IKLSESTSLLMSAVVTGGVSTIATITSMILTDKL-GRKVLFLVGGILMFV 317 (319)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~g~~~~~~ 317 (319)
......++.+..++|.++++ .+.+..+.. ...........++.+++|+++||+ |||+.+++|.+++.+
T Consensus 19 ~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~-~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 19 IWEYFSFYGMRALLILYLTNQLKYDDNHAY-ELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 33444567777788877754 566655443 334455566778899999999999 999998877766654
No 237
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.97 E-value=0.0019 Score=58.27 Aligned_cols=131 Identities=15% Similarity=0.068 Sum_probs=91.4
Q ss_pred hhhHHhHHHHHHHHHHHhhhhhhhhhhc--hhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHH
Q 047275 36 LLTTFTSSPFIAGLIASLFASKVTRALG--RKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYL 113 (319)
Q Consensus 36 ~~~~~~~~~~~g~~ig~~~~g~l~dr~G--Rr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i 113 (319)
+.+..---.++...+|+.++|.++||++ |-..-+.++....+.+....+++++..+++-++..|++.+...+...-..
T Consensus 307 ~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l 386 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTL 386 (464)
T ss_pred ceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhh
Confidence 3333333356677899999999999999 65555666666666677778899999999999999999999888777777
Q ss_pred HhcCCCCCCc------chhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHH
Q 047275 114 SEMAPPKHRG------AFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 114 ~e~~p~~~Rg------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~ 169 (319)
.+..++++-. ...+++..++++|...+...+.. +...+|.+|.-.+.++..++
T Consensus 387 ~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~---iv~~iGF~wl~~iig~~n~i 445 (464)
T KOG3764|consen 387 GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGS---LVEAIGFEWLMTIIGILNLI 445 (464)
T ss_pred HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccch---heeehhHHHHHHHHHHHHHH
Confidence 7777665543 34555666666665555443322 23346788876665555444
No 238
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.82 E-value=0.018 Score=51.32 Aligned_cols=241 Identities=12% Similarity=0.086 Sum_probs=129.7
Q ss_pred HhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHH
Q 047275 52 SLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQV 131 (319)
Q Consensus 52 ~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~ 131 (319)
-++.=.+.|..--|++++.-.+.+.....+--+.++.+.+=+.-+.-|...+... +-++|+-+..||+++-+..+-.-.
T Consensus 59 LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEI-AYysYIYs~Vd~~~Yqrvt~y~Ra 137 (433)
T KOG3810|consen 59 LVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEI-AYYSYIYSKVDPEMYKRVTGYCRA 137 (433)
T ss_pred HHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHH-hhhheeeeecCHHHHHHHHHHhHH
Confidence 3334457888889999999888888888888889999999999999999977764 556788888888876655444444
Q ss_pred HHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhcccccCChhhHHhccCChHHHHHHHHHHcCChhHHHHH
Q 047275 132 CTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALILPDTPNSIIQRSNGHEKAKKMLQRVRGTADVQAEL 211 (319)
Q Consensus 132 ~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~es~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 211 (319)
....|...+..++-+.-.. +.++.+.+=.+......+..+...++|.-++.+.-+..+++......++... +.+.
T Consensus 138 A~L~g~~~g~vlaQlLvs~-~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~----~~~~ 212 (433)
T KOG3810|consen 138 AFLVGKFVGSVLAQLLVSL-ETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMNP----QASY 212 (433)
T ss_pred HHHHHhHHHhHHHHHHhhh-cccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhcCc----cchh
Confidence 4444444444433322111 1233433323333332334445567776665544332222211111111111 1111
Q ss_pred HHHHHHHhhccccccchhhhhcccchhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcCCCchhhH--HHHHHHHHHHHH
Q 047275 212 DDLIRASIVSRTVKHPFQTIIQRKYRPQLVMAILIPFFQQLTGINVISFYAPVLFRTIKLSESTSL--LMSAVVTGGVST 289 (319)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 289 (319)
.+..+. ....-.+++-.. ++++.+....+......++++-+..|...+.++.. +.+.+. +..=....+...
T Consensus 213 ~~~l~~-----~~~~l~~~l~~~-y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~-~~~~~vyNG~veAv~tlLGa 285 (433)
T KOG3810|consen 213 MSYLRG-----AFVLLWRDLQEC-YSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA-PNPANVYNGAVEAVSTLLGA 285 (433)
T ss_pred hHHHHH-----HHHHHHHHHHHH-hcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC-CCchhhhcCHHHHHHHHHHH
Confidence 110000 000011122111 22333445556666678888999899888877764 322222 111122233455
Q ss_pred HHHHHHHHHHHhcCCc
Q 047275 290 IATITSMILTDKLGRK 305 (319)
Q Consensus 290 ~~~~~~g~l~dr~Grr 305 (319)
++.+..|++--.+.|+
T Consensus 286 ~~~~~~g~l~i~w~r~ 301 (433)
T KOG3810|consen 286 IAALAAGYLNINWNRW 301 (433)
T ss_pred HHHHHHHheeeccchh
Confidence 6677777776666665
No 239
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.46 E-value=0.03 Score=52.78 Aligned_cols=144 Identities=17% Similarity=0.099 Sum_probs=76.5
Q ss_pred ccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchh-------HHHHHHHHHHHHHHHH--hhhchh-hhHHHHHHHHH
Q 047275 29 YCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRK-------ASILVGGVAFLAGSAL--GGAAFN-VYMLILGRVLL 98 (319)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr-------~~~~~~~~~~~~~~~~--~~~a~~-~~~li~~R~l~ 98 (319)
.++++-++.+.+++..++.+.+..+++|+++|+.-+| +-+.-+......+..+ .++.++ ...+.+.=+..
T Consensus 288 VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~ 367 (466)
T KOG2532|consen 288 VLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTI 367 (466)
T ss_pred HhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHH
Confidence 3456778899999999999999999999999998662 2222222222222222 233332 22122222222
Q ss_pred hhhhhhccchhhHHHHhcC-CCCCCcchhhHHHHHHHHHHHH-HHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhc
Q 047275 99 GVGIGFSNQSVPLYLSEMA-PPKHRGAFNIGFQVCTAIGVLG-ANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGA 174 (319)
Q Consensus 99 Gig~g~~~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~ 174 (319)
+++..+...... +..-.. -|++-+...++.+....+..++ ..+++....+ ...-.||+.|.+.+...++..+.+
T Consensus 368 ~~~~~g~~~~Gf-~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~-~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 368 AIGLSGFNISGF-YKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD-NTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred HHHHcccchhhh-HhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC-CCHHHHHHHHHHHHHHHHHhchhe
Confidence 233333222222 222212 3455566666655555554433 3344444421 123579999998777665544433
No 240
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.35 E-value=0.021 Score=55.16 Aligned_cols=56 Identities=23% Similarity=0.242 Sum_probs=38.6
Q ss_pred hhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhhc
Q 047275 261 YAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFVS 318 (319)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~~ 318 (319)
-++++.+..|.+.... .......+...++.++.|.++|.+|||...+.+.++..+.
T Consensus 66 ~l~~I~~diG~~~~~~--w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG 121 (599)
T PF06609_consen 66 ILPYINADIGGSDNWS--WFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVG 121 (599)
T ss_pred HHHHHHHhcCCCccch--HHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhH
Confidence 3456666666654332 2333455566777889999999999999988877776554
No 241
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=96.33 E-value=0.064 Score=49.77 Aligned_cols=103 Identities=15% Similarity=0.108 Sum_probs=57.6
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh-----hchhhhHHHHHHHHHhhhhhhccc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG-----AAFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~-----~a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
++.+.++.......+..+++.+.+++.++.++++.......+..++..+.. ..++++.+++.-++.|+|.+...+
T Consensus 252 s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p 331 (413)
T PRK15403 252 TTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFP 331 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhH
Confidence 445556666556677788888888766544444433222222233322221 123444467888999999999888
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIG 136 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G 136 (319)
...... ...+...+|+..+........+
T Consensus 332 ~~~~~a-l~~~~~~~G~a~a~~~~~~~~~ 359 (413)
T PRK15403 332 TLFRFT-LFSNNLPKGTVSASLNMVILMV 359 (413)
T ss_pred HHHHHH-hccCCCCCcHHHHHHHHHHHHH
Confidence 777533 2223334676665555444333
No 242
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.31 E-value=0.039 Score=50.41 Aligned_cols=103 Identities=20% Similarity=0.302 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHhhhc---hh------hhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcc---hhhHHHHHH
Q 047275 66 ASILVGGVAFLAGSALGGAA---FN------VYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGA---FNIGFQVCT 133 (319)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~a---~~------~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~---~~~~~~~~~ 133 (319)
++++++.++..+|.++..++ .. ...+.++-++.++|.|+.=+....+.+|-++++++.. +-..+..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56677777788887763322 22 2678999999999999999999999999998775443 334455556
Q ss_pred HHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHH
Q 047275 134 AIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILT 171 (319)
Q Consensus 134 ~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 171 (319)
.+|.+++..... .+.++.||.+.|.+..+..++..
T Consensus 82 n~G~~~~~~~~~---~i~~~~~~~~~f~i~~~~~~~~~ 116 (372)
T PF00854_consen 82 NIGSLFSPTLVP---YIQQNYGWFLGFGIPAIGMLLAL 116 (372)
T ss_dssp HHHHHHHHHCCC---HHHHCS-HHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccch---hhccccchhhhhhHHHHHHHHHH
Confidence 666655543322 22345789999988776544433
No 243
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.22 E-value=0.012 Score=40.71 Aligned_cols=44 Identities=11% Similarity=0.267 Sum_probs=38.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHH
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAF 75 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~ 75 (319)
+++++.+.+.+...+..+++++++|.++||+||++..+....++
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 56789999999999999999999999999999999887766543
No 244
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.11 E-value=0.031 Score=52.99 Aligned_cols=126 Identities=10% Similarity=-0.010 Sum_probs=72.8
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhh----hchhHHHHHHHHHHHHHHHHhhhchh-hhHHHHHHHHHhhhhhhccc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRA----LGRKASILVGGVAFLAGSALGGAAFN-VYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr----~GRr~~~~~~~~~~~~~~~~~~~a~~-~~~li~~R~l~Gig~g~~~~ 107 (319)
+....+.++....++++++.+++|+++|| +.+|..+...+.++.+.+.+...+.+ ......+=+..+.+.+...+
T Consensus 307 s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (495)
T KOG2533|consen 307 SELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAI 386 (495)
T ss_pred ChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHH
Confidence 34555667777888999999999999999 78887777777777666543333333 33333334444444555555
Q ss_pred hhhHHHHhcCCCCCCcc-hhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHH
Q 047275 108 SVPLYLSEMAPPKHRGA-FNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISL 160 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f 160 (319)
.....+++...++.|.. ..++...+.+.+..+.+.+ ......+.++|-..|
T Consensus 387 ~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~--~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 387 IALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQL--FRSLDAPRYGWGAVF 438 (495)
T ss_pred HHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhh--cccccCcchhhhhHH
Confidence 66666677766555543 2233333333322222221 122334446777776
No 245
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.07 E-value=0.11 Score=48.87 Aligned_cols=110 Identities=17% Similarity=0.212 Sum_probs=87.4
Q ss_pred cccCcchhhHHhHHHHHHHHHHHhhhh-hhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccch
Q 047275 30 CKFNSQLLTTFTSSPFIAGLIASLFAS-KVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~ig~~~~g-~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~ 108 (319)
+.++.++.+.+.+....-..++..+.. .+...+|-|+.+..+++...+..+..+++++.|+......+.++. +...+.
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~~~pa 350 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GIVFPA 350 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cchhHH
Confidence 334566666666666666667776665 777789999999999999999999999999999999999998887 555677
Q ss_pred hhHHHHhcCCCCCCcchhhHHHHHHHHHHHHH
Q 047275 109 VPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGA 140 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~ 140 (319)
..++++-+.++++||+..+..+...++..+.+
T Consensus 351 ~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~ 382 (463)
T KOG2816|consen 351 IRAFASILVSPEEQGKVFGIISGIEGLSGVVS 382 (463)
T ss_pred HHhHHHhhcccccccchhhHHHHHHHHhhhhh
Confidence 77899999999999998777776666654433
No 246
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.78 E-value=0.094 Score=47.76 Aligned_cols=86 Identities=8% Similarity=-0.023 Sum_probs=72.1
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHH
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~ 112 (319)
+.+..+...+.+..+.++|-++..++..|+-..+.+.+..+.-.+-.+..+++.+... +.+=++.|...++.+|+..+.
T Consensus 270 ~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~-~~~l~~ig~F~simfPTIfsl 348 (422)
T COG0738 270 NEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA-LYALFLIGLFNSIMFPTIFSL 348 (422)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHHHHHHHHhHHHHHHHHHH
Confidence 4567778888888899999999999999999999998888777777777777777544 455678899999999999999
Q ss_pred HHhcCCC
Q 047275 113 LSEMAPP 119 (319)
Q Consensus 113 i~e~~p~ 119 (319)
..+-.|+
T Consensus 349 al~~l~~ 355 (422)
T COG0738 349 ALKNLGE 355 (422)
T ss_pred HHhccCc
Confidence 9999983
No 247
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.68 E-value=2 Score=40.80 Aligned_cols=100 Identities=17% Similarity=0.119 Sum_probs=63.6
Q ss_pred HHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc--h-----------------------------hhhHHHHHH
Q 047275 47 AGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA--F-----------------------------NVYMLILGR 95 (319)
Q Consensus 47 g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a--~-----------------------------~~~~li~~R 95 (319)
...+...+..+++++++|.+++...+..|...-.+.++. | +.|...+.-
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 455667778999999999999888887777665554442 1 112222222
Q ss_pred HHHhhhhhhccc-hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHhh
Q 047275 96 VLLGVGIGFSNQ-SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGAN-LLNYG 146 (319)
Q Consensus 96 ~l~Gig~g~~~~-~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~ 146 (319)
...-+-.....+ .-..+..|.++.++-.++-..+.++..+|.+.++ ...+.
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222233333 3467788999988888888888888888866544 44443
No 248
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.66 E-value=0.017 Score=53.17 Aligned_cols=97 Identities=24% Similarity=0.318 Sum_probs=66.0
Q ss_pred HHHHHhhhhhhhh----hhchhHHHHHHHHHHHHHH-HHhhhchhh-----------------hHHHHHHHHHhhhhhhc
Q 047275 48 GLIASLFASKVTR----ALGRKASILVGGVAFLAGS-ALGGAAFNV-----------------YMLILGRVLLGVGIGFS 105 (319)
Q Consensus 48 ~~ig~~~~g~l~d----r~GRr~~~~~~~~~~~~~~-~~~~~a~~~-----------------~~li~~R~l~Gig~g~~ 105 (319)
+++-+++.|..+| ||||||-++.+..+....+ ++.+.+.++ ..++++--+.=++.-..
T Consensus 80 G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~ 159 (498)
T KOG0637|consen 80 GLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTL 159 (498)
T ss_pred cceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhh
Confidence 3444566777777 6999998887776655544 455655444 23344444444555567
Q ss_pred cchhhHHHHhcCCCCCCcc-hhhHHHHHHHHHHHHHHHHH
Q 047275 106 NQSVPLYLSEMAPPKHRGA-FNIGFQVCTAIGVLGANLLN 144 (319)
Q Consensus 106 ~~~~~~~i~e~~p~~~Rg~-~~~~~~~~~~~G~~~~~~~~ 144 (319)
..++-++.+|...+++|-+ .++.+..+.++|..++...+
T Consensus 160 qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 160 QGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred hhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 7788899999987766665 88889998999877666554
No 249
>PTZ00207 hypothetical protein; Provisional
Probab=95.52 E-value=0.25 Score=47.97 Aligned_cols=135 Identities=9% Similarity=-0.016 Sum_probs=82.8
Q ss_pred HhHHHHHHHHHHHhhhhhhh---hh------hchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhh
Q 047275 40 FTSSPFIAGLIASLFASKVT---RA------LGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 40 ~~~~~~~g~~ig~~~~g~l~---dr------~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
+++..-++..+|-+..|.+. .| +.|--.+.+..+ ..++.++.+++..-..|.+.-++.|++.|..++...
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~ 474 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIA 474 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHH
Confidence 44555555555555555544 22 222223444444 555555555553336899999999999999999999
Q ss_pred HHHHhcCCCCCCcchhhHHHHHHHHHHHHH--HHHHhhccccC---------CCcchHHHHHhhHHHHHHHHHhccc
Q 047275 111 LYLSEMAPPKHRGAFNIGFQVCTAIGVLGA--NLLNYGTQKIK---------GGWGWRISLSMAAAPASILTLGALI 176 (319)
Q Consensus 111 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~--~~~~~~~~~~~---------~~~gWr~~f~~~~~~~~~~~~~~~~ 176 (319)
..++|.+- ++-|+.-....+...+|.++- .+.+.+.+... +..-.|.+|++....+....+....
T Consensus 475 ~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 475 LVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred HHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 99999999 777875555566666764432 33343332111 1145788888776666655444333
No 250
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.17 E-value=0.33 Score=42.00 Aligned_cols=72 Identities=17% Similarity=0.319 Sum_probs=51.2
Q ss_pred HHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhH-HHHhcCCCCCCc
Q 047275 49 LIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL-YLSEMAPPKHRG 123 (319)
Q Consensus 49 ~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~-~i~e~~p~~~Rg 123 (319)
++.+.+.|-++|+-|||+.-..-.+.++++ .++-.++.|..++++|.+.|++.+...+.--+ +++|.- ++|+
T Consensus 86 mLFGtivgSLaDkqGRKracvtycitYiLs-CiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn--ekr~ 158 (454)
T KOG4332|consen 86 MLFGTIVGSLADKQGRKRACVTYCITYILS-CITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN--EKRG 158 (454)
T ss_pred HHHHHHHHHHHhhhccccceeeehHHHHHH-HHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh--hccC
Confidence 344445567899999999655444444433 33446789999999999999999988877644 677875 3444
No 251
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.80 E-value=0.18 Score=46.56 Aligned_cols=117 Identities=12% Similarity=-0.021 Sum_probs=81.0
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhH-HHHHHHHHHHHHHHH----hhhchhhhHHHHHHHHHhhhhhhccc
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKA-SILVGGVAFLAGSAL----GGAAFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~-~~~~~~~~~~~~~~~----~~~a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
++...++......+++++|+.+.|.+.||...-+ +.+.......++.+. .-.-...+.+...-.+.|.+.-+.+|
T Consensus 299 ~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~P 378 (480)
T KOG2563|consen 299 EGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLP 378 (480)
T ss_pred CccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCC
Confidence 4567889999999999999999999999966543 444444444444221 11123345677788889999999999
Q ss_pred hhhHHHHhcC-CCCCCcchhhHHHHHHHHHHHHHHHHHhhccc
Q 047275 108 SVPLYLSEMA-PPKHRGAFNIGFQVCTAIGVLGANLLNYGTQK 149 (319)
Q Consensus 108 ~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~ 149 (319)
....+-.|.+ |..++...+-+...+...|.+.....+...+.
T Consensus 379 ig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~ 421 (480)
T KOG2563|consen 379 IGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAED 421 (480)
T ss_pred cceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhc
Confidence 9888888885 76776654444555566666666666665443
No 252
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.59 E-value=0.21 Score=46.80 Aligned_cols=105 Identities=13% Similarity=0.113 Sum_probs=73.8
Q ss_pred cCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh----------chhhhHHHHHHHHHhhh
Q 047275 32 FNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA----------AFNVYMLILGRVLLGVG 101 (319)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~----------a~~~~~li~~R~l~Gig 101 (319)
+++...+.......++.++|..++.+..-++.-|+++.++.++..+.++.... .++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 56666666666667777888888888888888899999988887777664221 12334444555667777
Q ss_pred hhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHH
Q 047275 102 IGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIG 136 (319)
Q Consensus 102 ~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G 136 (319)
.+...-+....++|..|+..-|...++......+|
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg 366 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLG 366 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 77777778889999999999887544444444444
No 253
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.55 E-value=4.1 Score=38.11 Aligned_cols=44 Identities=9% Similarity=-0.003 Sum_probs=31.7
Q ss_pred hHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHH
Q 047275 38 TTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSAL 81 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~ 81 (319)
+.....-.+..++.+...|.+.||..|.++...+++..-++-.+
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~ 84 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAA 84 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHH
Confidence 34444455566777888899999999999988887766555443
No 254
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.48 E-value=4.4 Score=38.18 Aligned_cols=112 Identities=13% Similarity=0.033 Sum_probs=68.8
Q ss_pred chhhHHhHHHHH-HHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhc---------hh-----------------
Q 047275 35 QLLTTFTSSPFI-AGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAA---------FN----------------- 87 (319)
Q Consensus 35 ~~~~~~~~~~~~-g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a---------~~----------------- 87 (319)
+....+-.-..+ ++++..++..++.++.-|.+++-..+..|...-++.++. ++
T Consensus 61 e~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~ 140 (509)
T COG3202 61 ESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKW 140 (509)
T ss_pred hhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcccee
Confidence 333344444444 667888889999999999999988888888777776653 11
Q ss_pred ------hhHHHHHHHHHhhhhhhccc-hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhh
Q 047275 88 ------VYMLILGRVLLGVGIGFSNQ-SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYG 146 (319)
Q Consensus 88 ------~~~li~~R~l~Gig~g~~~~-~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 146 (319)
.|...+.-...=+=.....+ .-.....|....++-.++...++++..++.++++.+..+
T Consensus 141 ~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 141 FILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred eeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 12222222222222122222 223455788877777788888888888887665544433
No 255
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=93.77 E-value=0.42 Score=44.83 Aligned_cols=107 Identities=20% Similarity=0.146 Sum_probs=72.9
Q ss_pred hHHhHHHHHHHHHHHhhhhhhhhhhchh-------HHHHHHHHHHHHHHHHhhhc----------hhhhHHHHHHHHHhh
Q 047275 38 TTFTSSPFIAGLIASLFASKVTRALGRK-------ASILVGGVAFLAGSALGGAA----------FNVYMLILGRVLLGV 100 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g~l~dr~GRr-------~~~~~~~~~~~~~~~~~~~a----------~~~~~li~~R~l~Gi 100 (319)
+++.+...+.-++.+++..++-.+.+|| .-+-+++.+.+.+-++...+ .+.++++..-+++++
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~ 406 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSF 406 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 3445555555555555555555554443 12344444444443332222 467899999999999
Q ss_pred hhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 047275 101 GIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLN 144 (319)
Q Consensus 101 g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 144 (319)
|+=...|+..+++....|++-.+..++.+-+..+.|..++..++
T Consensus 407 gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va 450 (498)
T COG3104 407 GELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVA 450 (498)
T ss_pred HHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceec
Confidence 99999999999999999999999888888888888876655443
No 256
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.67 E-value=0.25 Score=45.46 Aligned_cols=65 Identities=22% Similarity=0.204 Sum_probs=58.7
Q ss_pred hchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcc
Q 047275 84 AAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQ 148 (319)
Q Consensus 84 ~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~ 148 (319)
+.++.|..++.-+..|+-.|+.+..+...+.|-.|+++|....+..+++-++|++++.+++...+
T Consensus 331 fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 331 FIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999998888876543
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=93.27 E-value=0.64 Score=41.86 Aligned_cols=49 Identities=24% Similarity=0.202 Sum_probs=32.3
Q ss_pred HHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHh
Q 047275 266 FRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILM 315 (319)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~ 315 (319)
.++.+.+..+...+.. .-.+.+.+.+.+.|.++||+|||+..++.+++-
T Consensus 61 Y~~yg~~~~qIa~Lf~-~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily 109 (354)
T PF05631_consen 61 YESYGFSEHQIAILFV-AGFASSAIFGTFVGSLADRYGRKKACLLFCILY 109 (354)
T ss_pred HHHcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 4667777665443322 223445677778899999999999866655544
No 258
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.77 E-value=3.1 Score=39.11 Aligned_cols=94 Identities=22% Similarity=0.277 Sum_probs=67.0
Q ss_pred HHHHHHHHHhhhhhhh---hhhchhHHHHHHHHHHHHHHHHhhhc------------------hhhhHHHHHHHHHhhhh
Q 047275 44 PFIAGLIASLFASKVT---RALGRKASILVGGVAFLAGSALGGAA------------------FNVYMLILGRVLLGVGI 102 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~---dr~GRr~~~~~~~~~~~~~~~~~~~a------------------~~~~~li~~R~l~Gig~ 102 (319)
.-+|..+++.+.+.++ +++||++.+..+..+..++.++.-+. +++..-.+.=+++|++-
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 3445566666666666 56899998888888777776664332 24567778889999999
Q ss_pred hhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHH
Q 047275 103 GFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVL 138 (319)
Q Consensus 103 g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~ 138 (319)
+......+.++.+.. |++|..+.++.-.-..++..
T Consensus 368 ~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASC 402 (461)
T ss_pred HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHH
Confidence 999999999999999 56666555555555555543
No 259
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.72 E-value=1.1 Score=42.22 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=23.5
Q ss_pred HHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 047275 112 YLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLN 144 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 144 (319)
..-.+..+++++.+.+...++..+|...+..+-
T Consensus 142 WALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 142 WALTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred hhhhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 344556778889888888888888877665443
No 260
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=92.50 E-value=5.7 Score=36.69 Aligned_cols=123 Identities=19% Similarity=0.156 Sum_probs=72.3
Q ss_pred HHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchh
Q 047275 47 AGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFN 126 (319)
Q Consensus 47 g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~ 126 (319)
-.++--+++.+..+|..-+.=...+..+..++.++.+++++.+.=+++=.+.+++.|..-.....+.+ .+++..-+
T Consensus 71 P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~~~l~--- 146 (402)
T PF02487_consen 71 PSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGKSSLS--- 146 (402)
T ss_pred HHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCccccc---
Confidence 33444455666777776554455556677888888899999999889999999998888777777644 56654333
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHHHHHHHHhccc
Q 047275 127 IGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAPASILTLGALI 176 (319)
Q Consensus 127 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~ 176 (319)
.++.+.+.+.+++.+....... . .++=|..+.+.....++..+..++
T Consensus 147 -~wssGTG~aGl~Ga~~y~~lT~-~-g~s~~~tll~~~~lp~~~~~~~f~ 193 (402)
T PF02487_consen 147 -AWSSGTGGAGLVGALYYLGLTT-L-GLSPRTTLLIMLVLPAIFLLSYFF 193 (402)
T ss_pred -cccCCcChhhHHHHHHHHHHHH-h-CcCHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344333333333222222 1 133455555544443444444333
No 261
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=91.68 E-value=1.1 Score=42.25 Aligned_cols=78 Identities=19% Similarity=0.219 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHHHhhhhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 237 RPQLVMAILIPFFQQLTGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
++.+...+...++..+= ....+-.|++.++.+++..+............-.++-+.+|+++||+|-|+.+.++.+...
T Consensus 26 ~~~~~~lC~fGF~~e~R--~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Ws 103 (511)
T TIGR00806 26 RVLVLYLCFYGFMAQFR--PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFV 103 (511)
T ss_pred hHHHHHHHHHHHHHHhh--chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 34444444444444321 2344567777777887765522233333344456778899999999999998876665443
No 262
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=91.22 E-value=1.8 Score=41.94 Aligned_cols=115 Identities=18% Similarity=0.237 Sum_probs=74.2
Q ss_pred HHHHhhhhhhhhh-hchhHHHHHHHHHHHHHHHHhhhc---h----------------------hhhHHHHHHHHHhhhh
Q 047275 49 LIASLFASKVTRA-LGRKASILVGGVAFLAGSALGGAA---F----------------------NVYMLILGRVLLGVGI 102 (319)
Q Consensus 49 ~ig~~~~g~l~dr-~GRr~~~~~~~~~~~~~~~~~~~a---~----------------------~~~~li~~R~l~Gig~ 102 (319)
...+++.+.++|. +||-+++.++.++..+|..+..++ + -...+..+..+..+|.
T Consensus 87 ~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~ 166 (571)
T KOG1237|consen 87 FLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGA 166 (571)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheecc
Confidence 4666778888884 899999999988888875432221 1 1136778888899999
Q ss_pred hhccchhhHHHHhcCC---CCC-Cc--chhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHHHHhhHHH
Q 047275 103 GFSNQSVPLYLSEMAP---PKH-RG--AFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRISLSMAAAP 166 (319)
Q Consensus 103 g~~~~~~~~~i~e~~p---~~~-Rg--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~ 166 (319)
|+.-+....+-+|-++ +++ +. .+..-+......|.+....+-... .+..+|.+-|.+....
T Consensus 167 gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi---q~~~~w~lgf~i~~~~ 233 (571)
T KOG1237|consen 167 GGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI---QDNVGWKLGFGIPTVL 233 (571)
T ss_pred CCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh---hhcccceeeccHHHHH
Confidence 9999999999999888 322 22 233344455566655444332222 2335677766554443
No 263
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=90.70 E-value=1.3 Score=40.40 Aligned_cols=114 Identities=18% Similarity=0.132 Sum_probs=86.3
Q ss_pred ccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhc--hhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccch
Q 047275 31 KFNSQLLTTFTSSPFIAGLIASLFASKVTRALG--RKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQS 108 (319)
Q Consensus 31 ~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~G--Rr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~ 108 (319)
.+++.+.+..-+..-+++.+......+..||.. -+-.+..++.+..-.-++.+.++....+..+-.+--+..+...+.
T Consensus 293 g~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~ 372 (451)
T KOG2615|consen 293 GYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTC 372 (451)
T ss_pred CCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHH
Confidence 345666666655556666666666667777766 666777777776666777778888888999999999998888888
Q ss_pred hhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 047275 109 VPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLN 144 (319)
Q Consensus 109 ~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 144 (319)
...++....|+++||..+++.....+++-.++++++
T Consensus 373 Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 373 LTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred HHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 889999999999999988887777777655555554
No 264
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=90.57 E-value=0.27 Score=48.43 Aligned_cols=75 Identities=19% Similarity=0.104 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhhhhhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhh
Q 047275 242 MAILIPFFQQLTGINVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFV 317 (319)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~ 317 (319)
.......+.+.........-.|.+.++.+.++.+.- +......+...++.++.+++.||.|||+.+.+|.+++.+
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G-~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~l 110 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSG-LINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGL 110 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcce-eeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHH
Confidence 333334444443334444556677777777765432 334444556677888999999999999887666665544
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.29 E-value=3.3 Score=38.87 Aligned_cols=92 Identities=11% Similarity=0.043 Sum_probs=48.9
Q ss_pred hhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCC---cchHHH--HH
Q 047275 87 NVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGG---WGWRIS--LS 161 (319)
Q Consensus 87 ~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~---~gWr~~--f~ 161 (319)
.++..++.=++.|++.|...+....+.+. +|++.-+ ....+.+++.+++.++........+. ..+... |.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~~-fp~~~~~----a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~ 179 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAGV-FPSTYSS----AVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFG 179 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhccc-CCHHHHH----HHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHH
Confidence 56777788889999999999888888764 6655433 33444444433333322221111111 233332 33
Q ss_pred hhHHHHHHHHHhcccccCChhh
Q 047275 162 MAAAPASILTLGALILPDTPNS 183 (319)
Q Consensus 162 ~~~~~~~~~~~~~~~l~es~~~ 183 (319)
+..+..++.++....++..|..
T Consensus 180 ~a~~v~l~~i~~~~~l~k~~~~ 201 (437)
T TIGR00939 180 TPCVVQLICIVCYLLLPKLPFA 201 (437)
T ss_pred HHHHHHHHHHHHHHHHhcCHHH
Confidence 3444444444445566666543
No 266
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=89.92 E-value=4.1 Score=38.07 Aligned_cols=124 Identities=19% Similarity=0.165 Sum_probs=77.4
Q ss_pred CcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhh---ch-------hhhHHHHHHHHHhhhh
Q 047275 33 NSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGA---AF-------NVYMLILGRVLLGVGI 102 (319)
Q Consensus 33 ~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~---a~-------~~~~li~~R~l~Gig~ 102 (319)
++...+.+-+...+.++.|.+.+.++.+|+|..+.=++++......-.++.. ++ +...|+.+=.+.=+|.
T Consensus 291 s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GL 370 (432)
T PF06963_consen 291 SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGL 370 (432)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHH
Confidence 4556666666677778899999999999999998877777655544433322 22 2222322222222333
Q ss_pred hhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchH
Q 047275 103 GFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWR 157 (319)
Q Consensus 103 g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr 157 (319)
=+.=-...-++-|..|+++||..++.......+--+...++...... ..+++|-
T Consensus 371 W~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~-P~~F~~l 424 (432)
T PF06963_consen 371 WSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPR-PSQFGWL 424 (432)
T ss_pred HhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCC-hHhcChH
Confidence 23333445577899999999999888877777766666665543322 2335553
No 267
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=88.99 E-value=1.7 Score=37.37 Aligned_cols=61 Identities=28% Similarity=0.347 Sum_probs=44.1
Q ss_pred hhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhh
Q 047275 255 INVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFV 317 (319)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~ 317 (319)
.+.+..|.|.+-++.+.++.+...+ .....+.... ++..|.+.||+|.|..+++|++...+
T Consensus 18 ~Y~Fs~yS~~Lk~~l~~sq~~l~~l-~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 18 TYTFSAYSPQLKSRLGYSQSQLNTL-STAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ccchhhhhHHHHHHhCCCHHHHHHH-HHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4667889999999888887654422 2222233333 57889999999999999988887654
No 268
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=86.30 E-value=0.61 Score=44.27 Aligned_cols=61 Identities=16% Similarity=0.161 Sum_probs=44.8
Q ss_pred hhHhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 255 INVISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
...+...++.++.+.|.+.+..- +....--++++.+.++.|+++||+-+|+.++.|..++.
T Consensus 27 ~g~l~pll~vy~kQLGl~p~~~G-tl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~ 87 (618)
T KOG3762|consen 27 FGSLFPLLAVYFKQLGLNPAVVG-TLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLS 87 (618)
T ss_pred ccccchHHHHHHHHcCCCHHHhh-hhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHH
Confidence 34445667888899999876543 44444557889999999999999988777766665554
No 269
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=85.45 E-value=4.8 Score=28.26 Aligned_cols=59 Identities=15% Similarity=0.014 Sum_probs=40.2
Q ss_pred HhHhhhHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 257 VISFYAPVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
.++..+|...++.+++..+.. .....+.+.-.+|.+...++.++..+++.+..+.+..+
T Consensus 10 ayTplLP~M~~~~~ls~~~ag-~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~ 68 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLSQAG-WLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTV 68 (85)
T ss_pred HHHhHhHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 345677888888777765544 55666667777888888888887666666655554443
No 270
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=85.28 E-value=2.1 Score=39.95 Aligned_cols=55 Identities=24% Similarity=0.157 Sum_probs=37.1
Q ss_pred HHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhhhc
Q 047275 263 PVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMFVS 318 (319)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~~~ 318 (319)
+.+.+..+.+.+. .++......+...+.++++|++.||+.|+.++.+|..+...+
T Consensus 57 ~~v~~~fni~~s~-~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 57 KEVQTYFNISDSE-LGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLA 111 (493)
T ss_pred HHHHHhcCCCchh-ccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHH
Confidence 3333334444332 334444555667788999999999999999988887765543
No 271
>PRK03612 spermidine synthase; Provisional
Probab=85.22 E-value=24 Score=34.00 Aligned_cols=100 Identities=11% Similarity=0.030 Sum_probs=48.9
Q ss_pred hHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHH-HHHHHH-HHHHHh----hhc-hhhhHHHHHHHHHhhhhhhccchhh
Q 047275 38 TTFTSSPFIAGLIASLFASKVTRALGRKASILV-GGVAFL-AGSALG----GAA-FNVYMLILGRVLLGVGIGFSNQSVP 110 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~-~~~~~~-~~~~~~----~~a-~~~~~li~~R~l~Gig~g~~~~~~~ 110 (319)
+.+.+.+..|..+|+.+.+++.++--|+....- .+.+.. +...+. +.. .....+...-++.|+-.|+..|...
T Consensus 53 ~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~ 132 (521)
T PRK03612 53 STVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLM 132 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777888999988887644333322111 111111 001010 111 1112234455677888888888877
Q ss_pred HHHHhcCC---CCCCcchhhHHHHHHHHHH
Q 047275 111 LYLSEMAP---PKHRGAFNIGFQVCTAIGV 137 (319)
Q Consensus 111 ~~i~e~~p---~~~Rg~~~~~~~~~~~~G~ 137 (319)
-+..+... .+.-|+......++..+|.
T Consensus 133 ~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~ 162 (521)
T PRK03612 133 RILQRIRDQHLGHNVATVLAADYLGALVGG 162 (521)
T ss_pred HHHHhccccchhhhhhhhHhHHhHHHHHHH
Confidence 66655433 1222344444444444443
No 272
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=81.90 E-value=38 Score=31.38 Aligned_cols=37 Identities=14% Similarity=-0.014 Sum_probs=28.0
Q ss_pred hhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCc
Q 047275 86 FNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRG 123 (319)
Q Consensus 86 ~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg 123 (319)
..+...++.=.+.|.+.|..........++ .|++.-.
T Consensus 115 ~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytq 151 (406)
T KOG1479|consen 115 GFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQ 151 (406)
T ss_pred hhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHH
Confidence 466777888889999999888888877666 5666543
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=80.60 E-value=9.6 Score=35.78 Aligned_cols=62 Identities=13% Similarity=0.131 Sum_probs=53.7
Q ss_pred hhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhc
Q 047275 86 FNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGT 147 (319)
Q Consensus 86 ~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 147 (319)
++-+..++.-++.|+..|-..+..+.+..+..++++|..++.+..++..+|...|..+++..
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677888899999999999999999999999999999888888888888988888776543
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=78.69 E-value=8.4 Score=30.50 Aligned_cols=37 Identities=22% Similarity=0.271 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 280 SAVVTGGVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 280 ~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
...+......+++++.+.+.+++|.|+.+++|.++-.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~ 78 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYA 78 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHH
Confidence 3444455567888889999999999999888876643
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=78.12 E-value=8.5 Score=35.48 Aligned_cols=109 Identities=17% Similarity=0.119 Sum_probs=77.6
Q ss_pred hhhHHhHH-HHHHHHHHHhhhhhhhhhhchhHHHHHH--HHHHHHHHHHh------hhchhhhHHHHHHHHHhhhhhhcc
Q 047275 36 LLTTFTSS-PFIAGLIASLFASKVTRALGRKASILVG--GVAFLAGSALG------GAAFNVYMLILGRVLLGVGIGFSN 106 (319)
Q Consensus 36 ~~~~~~~~-~~~g~~ig~~~~g~l~dr~GRr~~~~~~--~~~~~~~~~~~------~~a~~~~~li~~R~l~Gig~g~~~ 106 (319)
..-.+... +-+.-++|.+...++.+. +||...+.. -.++.-.-.+| ..-.+-+.+++.=.+.|+..|=..
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 33344455 667778887777777665 344433322 22333333322 335677889999999999999999
Q ss_pred chhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 047275 107 QSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNY 145 (319)
Q Consensus 107 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~ 145 (319)
+..+.+..+-.|++++-.++.+..++...|...|.+.+|
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999999999888888888888888888877654
No 276
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=76.10 E-value=23 Score=30.39 Aligned_cols=31 Identities=29% Similarity=0.486 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHhcCCchHHHHhhHHhh
Q 047275 286 GVSTIATITSMILTDKLGRKVLFLVGGILMF 316 (319)
Q Consensus 286 ~~~~~~~~~~g~l~dr~Grr~~~~~g~~~~~ 316 (319)
++..+..+.+-+++.|+.-|+..++|++++.
T Consensus 251 lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi 281 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRTVTLIGGILFI 281 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEEEEEecchhHH
Confidence 3444555666788899998988777776553
No 277
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=75.43 E-value=30 Score=29.96 Aligned_cols=104 Identities=13% Similarity=0.030 Sum_probs=60.1
Q ss_pred hHHhHHHHHHHHHHHhhhhhhhhh-hchhHHHH----HHHHHHHHHHHHh-hhc----hhhhHHHHHHHHHhhhhhhccc
Q 047275 38 TTFTSSPFIAGLIASLFASKVTRA-LGRKASIL----VGGVAFLAGSALG-GAA----FNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 38 ~~~~~~~~~g~~ig~~~~g~l~dr-~GRr~~~~----~~~~~~~~~~~~~-~~a----~~~~~li~~R~l~Gig~g~~~~ 107 (319)
..+.-.+..|..+|.+..|+.... +-||+-+. .+.+++.+..++. ..+ .++..+.+.-|+.|...=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 334444555667888888888774 55665333 2233333333331 111 2467788888999988766655
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANL 142 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~ 142 (319)
..- ++-.-.+..++-+....++..+++|.+.-.+
T Consensus 224 ViL-~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi 257 (267)
T PF07672_consen 224 VIL-NLPHEYKGYNPKKIGIQFGLIWGFGYIFYTI 257 (267)
T ss_pred HHh-cChhhhcCCCcceehhHHHHHHHHHHHHHHH
Confidence 443 3332233334445566788888888765443
No 278
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=72.19 E-value=84 Score=29.20 Aligned_cols=91 Identities=22% Similarity=0.215 Sum_probs=55.8
Q ss_pred hhhhhhhh-----hhchhHH------HHHHHHHHHHHHHH------hhhchhhhHHHHHHHHHhhhhhhccchhhHHHHh
Q 047275 53 LFASKVTR-----ALGRKAS------ILVGGVAFLAGSAL------GGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSE 115 (319)
Q Consensus 53 ~~~g~l~d-----r~GRr~~------~~~~~~~~~~~~~~------~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e 115 (319)
+.+.++.| |+||||. ++.+.++..++... .+-.++...+...-++.=+.++.-=.++-...-.
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALt 160 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALT 160 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 45778888 9999985 44555544444332 1222344333334444455555555555556666
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 047275 116 MAPPKHRGAFNIGFQVCTAIGVLGANLL 143 (319)
Q Consensus 116 ~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 143 (319)
+..+++-|.+++...++..+|...+..+
T Consensus 161 mLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 161 MLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred hcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 7778888888888888888887666543
No 279
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=67.90 E-value=16 Score=32.56 Aligned_cols=76 Identities=16% Similarity=0.096 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhh
Q 047275 71 GGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYG 146 (319)
Q Consensus 71 ~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 146 (319)
-++++.+...+--+.++++...+.-+.-|+-.|..+..+.--+.+-.+|++|-.+++....+-++|+.++++++..
T Consensus 325 vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 325 VNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 3444555555566789999999999999999999999988888888999999998888888889998877776653
No 280
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=66.92 E-value=8 Score=36.67 Aligned_cols=56 Identities=16% Similarity=0.152 Sum_probs=37.2
Q ss_pred HHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhhHHhhhc
Q 047275 263 PVLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDKLGR-KVLFLVGGILMFVS 318 (319)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~g~~~~~~~ 318 (319)
|+..+-......+..++......+...++++..++...|.++ |++++.|.+++.++
T Consensus 59 pYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g 115 (488)
T KOG2325|consen 59 PYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIG 115 (488)
T ss_pred hhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHH
Confidence 444332333333334455555677788999999999999996 66777777777654
No 281
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=66.47 E-value=2 Score=38.21 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=3.9
Q ss_pred HHHHHHHHHHhhhhhhhhhh---chhHHHHH--HHHHHHHHHHHhh----------hchhhhHHHHHHHHHhhhhhhccc
Q 047275 43 SPFIAGLIASLFASKVTRAL---GRKASILV--GGVAFLAGSALGG----------AAFNVYMLILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 43 ~~~~g~~ig~~~~g~l~dr~---GRr~~~~~--~~~~~~~~~~~~~----------~a~~~~~li~~R~l~Gig~g~~~~ 107 (319)
.+.+|=.+|....++. ++ .+|+.++. .-+.|...-++|. ..+|-+..++.=++.|+..|-..+
T Consensus 190 ~Fn~gD~iGR~l~~~~--~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~t 267 (309)
T PF01733_consen 190 LFNLGDFIGRFLASWP--RWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLST 267 (309)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred HHHHHHHhcchhccee--EecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhhh
Confidence 3444556666665543 22 24444443 2334433333442 234567778888999999999999
Q ss_pred hhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhh
Q 047275 108 SVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYG 146 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 146 (319)
..+.+..+..++++|...+.+..++..+|...|..+++.
T Consensus 268 l~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 268 LAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHH------------------------------------
T ss_pred ceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888888888888888776653
No 282
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=66.20 E-value=28 Score=29.24 Aligned_cols=55 Identities=22% Similarity=0.224 Sum_probs=31.7
Q ss_pred HhhhHHHHHhcCCCch-hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhhH
Q 047275 259 SFYAPVLFRTIKLSES-TSLLMSAVVTGGVSTIATITSMILTDKLGRKVLFLVGGI 313 (319)
Q Consensus 259 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~g~~ 313 (319)
....+.+....+.... ................+.+..|.+.||.|||+..+.+..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 77 (338)
T COG0477 22 SPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLL 77 (338)
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHH
Confidence 3445555555444332 112233333444455666899999999999976665553
No 283
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=63.81 E-value=8.6 Score=36.02 Aligned_cols=75 Identities=23% Similarity=0.155 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhc
Q 047275 42 SSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEM 116 (319)
Q Consensus 42 ~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~ 116 (319)
..+.+-..+-+....++.+++|-|+.++.+...|.++..+.+..++.+....-|-..|+-.+.....-...++++
T Consensus 339 ~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y 413 (498)
T KOG0637|consen 339 MLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALY 413 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHH
Confidence 344555567788889999999988888888777899998889999999999999988876666655555555443
No 284
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=61.81 E-value=31 Score=31.10 Aligned_cols=68 Identities=21% Similarity=0.223 Sum_probs=53.5
Q ss_pred HHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 50 IASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 50 ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
..+++.+.+..++|-|.++.++...+...- ..-+-+.+..++-+-...|+|.|..+..-.+|+++...
T Consensus 73 ~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 334444578889999999998887765533 33456888999999999999999999999999887754
No 285
>COG1271 CydA Cytochrome bd-type quinol oxidase, subunit 1 [Energy production and conversion]
Probab=60.35 E-value=1.5e+02 Score=27.92 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=24.0
Q ss_pred HHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh
Q 047275 47 AGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG 83 (319)
Q Consensus 47 g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~ 83 (319)
...+|..++|+ ||++ |+.-..++.+..+|+.+++
T Consensus 108 a~FLGi~lfgw--drv~-~~~H~~~t~~VAiGt~~Sa 141 (457)
T COG1271 108 ATFLGIFLFGW--DRVS-KKLHLLSTWLVAIGTNLSA 141 (457)
T ss_pred HHHHhheeeec--cccC-chhHHHHHHHHHHHHHHHH
Confidence 44566666666 8888 6677777777788877665
No 286
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=56.20 E-value=99 Score=28.79 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=62.9
Q ss_pred cchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHH--HHHhhhchhhhHHHHHHHHHhhhhhhccchhhH
Q 047275 34 SQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAG--SALGGAAFNVYMLILGRVLLGVGIGFSNQSVPL 111 (319)
Q Consensus 34 ~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~--~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~ 111 (319)
...-+.+.+...+.+.++++..|++..++.+-.-+.++.+....+ -++++...|.+...++-++-+..-....+.+..
T Consensus 284 ~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~ 363 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASF 363 (412)
T ss_pred cccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567778888888999999999988888865555554444433 345677788888888877777776666666655
Q ss_pred HHHhcCCCCCCcch
Q 047275 112 YLSEMAPPKHRGAF 125 (319)
Q Consensus 112 ~i~e~~p~~~Rg~~ 125 (319)
=++.....++-|..
T Consensus 364 qIA~~l~~e~yaLV 377 (412)
T PF01770_consen 364 QIAKNLSEERYALV 377 (412)
T ss_pred HHHHhccccceeee
Confidence 55555555554543
No 287
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=55.46 E-value=81 Score=23.19 Aligned_cols=47 Identities=19% Similarity=0.084 Sum_probs=27.2
Q ss_pred HHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCC
Q 047275 73 VAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPP 119 (319)
Q Consensus 73 ~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~ 119 (319)
....+++++.++..+...=--.|...+.|.-+..++-.++..|...-
T Consensus 34 ~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 34 IANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHHH
Confidence 34444555444332221111245566777777788888899888764
No 288
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=51.48 E-value=40 Score=33.55 Aligned_cols=53 Identities=23% Similarity=0.281 Sum_probs=32.6
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh-cCCchHHHHhhHHhhh
Q 047275 264 VLFRTIKLSESTSLLMSAVVTGGVSTIATITSMILTDK-LGRKVLFLVGGILMFV 317 (319)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~g~~~~~~ 317 (319)
++.+..+.+......+.... ....-+..+++++++|+ +||++..+++.++..+
T Consensus 13 Yl~~~lg~~~~~A~~i~~~f-~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~l 66 (654)
T TIGR00926 13 YFLNFLGFSESTSTVLFHTF-TYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVV 66 (654)
T ss_pred HHHHHcCCcHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33344565555444333333 34455777788999999 5998887766665443
No 289
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=47.69 E-value=1.1e+02 Score=22.89 Aligned_cols=80 Identities=15% Similarity=-0.059 Sum_probs=41.6
Q ss_pred HHHHHHHHHhhhhhhhhhhchhHHH-HHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCC
Q 047275 44 PFIAGLIASLFASKVTRALGRKASI-LVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHR 122 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr~~~-~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~R 122 (319)
..+|+.+|+..-=.+.....++... ........+++++.++......-=-.|.+.+.|.-+..++-.++..|....-++
T Consensus 8 V~iGG~lGa~~Ry~~~~~~~~~~~~p~gTl~VNi~GsfllG~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~~l~~~ 87 (119)
T PRK14230 8 LSIGAALGATARWLLNLAVPASLSPATGNLFANWTGALLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETVTLLQS 87 (119)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHhchHhhHHHHHHHHHHHHHC
Confidence 4567777776532222223222111 334445555565554433221101136666777777778888888888764333
Q ss_pred c
Q 047275 123 G 123 (319)
Q Consensus 123 g 123 (319)
+
T Consensus 88 ~ 88 (119)
T PRK14230 88 N 88 (119)
T ss_pred C
Confidence 3
No 290
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=47.36 E-value=56 Score=23.77 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=27.3
Q ss_pred chhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHH
Q 047275 35 QLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLA 77 (319)
Q Consensus 35 ~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~ 77 (319)
...+.......+|..++..+.+.+.|..|.+..+........+
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALA 129 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHH
Confidence 3344555566677777888888888877776665554444333
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.01 E-value=36 Score=24.95 Aligned_cols=20 Identities=25% Similarity=0.079 Sum_probs=9.9
Q ss_pred HHHHHHHhc-CCchHHHHhhH
Q 047275 294 TSMILTDKL-GRKVLFLVGGI 313 (319)
Q Consensus 294 ~~g~l~dr~-Grr~~~~~g~~ 313 (319)
..||+.||+ |.+|..++..+
T Consensus 61 ~iG~llD~~agTsPwglIv~l 81 (116)
T COG5336 61 GIGWLLDKFAGTSPWGLIVFL 81 (116)
T ss_pred HHHHHHHHhcCCCcHHHHHHH
Confidence 345666664 44554444333
No 292
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=45.41 E-value=1.1e+02 Score=21.63 Aligned_cols=51 Identities=20% Similarity=0.379 Sum_probs=32.6
Q ss_pred hhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 047275 86 FNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLL 143 (319)
Q Consensus 86 ~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 143 (319)
+--+=++++|.+.|-+.+...........|..| ..+..++..+|+.+...+
T Consensus 29 pit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~p-------lAv~GlgsalGI~G~q~v 79 (89)
T PF04550_consen 29 PITLRLFIGRVILGSAVSVVAGAALIQFPDLPP-------LAVIGLGSALGIAGYQAV 79 (89)
T ss_pred CCchhHHhHHHHHhhHHHHHHHHHHhcCCCCCH-------HHHHHHHHHHHhhhHHHH
Confidence 334568999999999988776655554444444 234556666666655444
No 293
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=45.34 E-value=7 Score=34.71 Aligned_cols=83 Identities=19% Similarity=0.123 Sum_probs=0.0
Q ss_pred HHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccccCCCcchHHH--HHhhHHHHHHHHHh
Q 047275 96 VLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQKIKGGWGWRIS--LSMAAAPASILTLG 173 (319)
Q Consensus 96 ~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~gWr~~--f~~~~~~~~~~~~~ 173 (319)
++.|++.|...+....+.+. +|++.... ...+.+++.++..++........+...+... |.+..+..++.++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y~~a----~~~Gq~~aGv~~s~l~ii~~~~~~~~~~~a~~yF~~a~~i~i~~~~~ 79 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKYTQA----VMIGQGLAGVIVSLLRIITKASGSDVKTSAFIYFIIAVLIVILCIIL 79 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHHHHH----HHhhccHHHHHHHHHHHHHHHhhhccchhhhhHHHHHHHHHHHHHHH
Confidence 46777888888888888776 66655443 3344444433333333221111111223332 33333333334444
Q ss_pred cccccCChhh
Q 047275 174 ALILPDTPNS 183 (319)
Q Consensus 174 ~~~l~es~~~ 183 (319)
...++.+|..
T Consensus 80 ~~~l~~~~~~ 89 (309)
T PF01733_consen 80 YFILPRSPFY 89 (309)
T ss_dssp ----------
T ss_pred HHHhccChHH
Confidence 5556666543
No 294
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.98 E-value=71 Score=23.46 Aligned_cols=30 Identities=23% Similarity=0.244 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHHhhhhhhhhh-hchhHHHHH
Q 047275 41 TSSPFIAGLIASLFASKVTRA-LGRKASILV 70 (319)
Q Consensus 41 ~~~~~~g~~ig~~~~g~l~dr-~GRr~~~~~ 70 (319)
.++=++++.+-....||+.|+ +|.++..++
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 455677776666677999998 466654443
No 295
>COG1288 Predicted membrane protein [Function unknown]
Probab=40.52 E-value=2.4e+02 Score=26.51 Aligned_cols=19 Identities=32% Similarity=0.336 Sum_probs=12.6
Q ss_pred CCCcchHHHHHhhHHHHHH
Q 047275 151 KGGWGWRISLSMAAAPASI 169 (319)
Q Consensus 151 ~~~~gWr~~f~~~~~~~~~ 169 (319)
.+..+||...++......+
T Consensus 213 ~sG~~~Riv~~v~~~~~~i 231 (481)
T COG1288 213 LSGMGLRIVVWVVFTLISI 231 (481)
T ss_pred cccchHHHHHHHHHHHHHH
Confidence 4568999988765554333
No 296
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=40.38 E-value=58 Score=23.81 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=20.5
Q ss_pred CCcchHHHHHhhHHHHHH-HHHhcccccCChh
Q 047275 152 GGWGWRISLSMAAAPASI-LTLGALILPDTPN 182 (319)
Q Consensus 152 ~~~gWr~~f~~~~~~~~~-~~~~~~~l~es~~ 182 (319)
+.++|+.++++....+++ ..+...+.||+..
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 447899988776655444 4455667788754
No 297
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=40.13 E-value=1e+02 Score=22.42 Aligned_cols=32 Identities=16% Similarity=-0.023 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhchhHHHHHHHH
Q 047275 42 SSPFIAGLIASLFASKVTRALGRKASILVGGV 73 (319)
Q Consensus 42 ~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~ 73 (319)
.+..+..++|.+++-|+-.+||-++.+.+..+
T Consensus 50 ~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~l 81 (100)
T TIGR02230 50 WSVAIPTLLGVAVGIWLDRHYPSPFSWTLTML 81 (100)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 33333434444444455557887764444433
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=39.80 E-value=70 Score=27.76 Aligned_cols=50 Identities=18% Similarity=0.019 Sum_probs=29.3
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHhhcc---ccCCCcchHHHHHhhHHHHHHH
Q 047275 120 KHRGAFNIGFQVCTAIGVLGANLLNYGTQ---KIKGGWGWRISLSMAAAPASIL 170 (319)
Q Consensus 120 ~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~---~~~~~~gWr~~f~~~~~~~~~~ 170 (319)
++|+..+.....+..+|.++..+.- ... .....-.|++.+.+.++...+-
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF-~~~~~~~~~~~~~W~~I~si~~lL~~Ip 54 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPF-LISSSVVIALTNNWQWILSIFILLIFIP 54 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhH-HhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778777777777888865543321 111 0111235999887776655443
No 299
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=39.47 E-value=50 Score=32.22 Aligned_cols=62 Identities=21% Similarity=0.209 Sum_probs=51.9
Q ss_pred hhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCcchhhHHHHHHHHHHHHHHHHHhhcc
Q 047275 87 NVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRGAFNIGFQVCTAIGVLGANLLNYGTQ 148 (319)
Q Consensus 87 ~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~ 148 (319)
+..+++==-++.|+++.........+-.+-+|++-|+...+++.+..++|..+..++.-...
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~ 518 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQ 518 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677778899999999999999999999999999999999999999999776665544333
No 300
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=38.79 E-value=43 Score=20.56 Aligned_cols=17 Identities=24% Similarity=0.395 Sum_probs=12.1
Q ss_pred HHHHHhhhhhhhhhhch
Q 047275 48 GLIASLFASKVTRALGR 64 (319)
Q Consensus 48 ~~ig~~~~g~l~dr~GR 64 (319)
+.+|+++.+++.+.+|-
T Consensus 4 GiiGa~vGg~l~~~lg~ 20 (48)
T PF04226_consen 4 GIIGAFVGGWLFGLLGI 20 (48)
T ss_pred ehHHHHHHHHHHHHhcc
Confidence 46777777777777776
No 301
>COG4769 Predicted membrane protein [Function unknown]
Probab=38.13 E-value=39 Score=26.86 Aligned_cols=46 Identities=26% Similarity=0.220 Sum_probs=31.6
Q ss_pred HHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhh
Q 047275 50 IASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVG 101 (319)
Q Consensus 50 ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig 101 (319)
+.+...-+...++|.|..=+++. +.+.++.+|..+++++|++.|-.
T Consensus 88 i~S~L~m~~l~~f~~k~~S~lgi------S~mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 88 ILSTLFMYFLYQFGPKYLSLLGI------SVMGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHcCCceEeeeeh------hhHHHHHHhHHHHHHHHHHHhcc
Confidence 33444567778888775533322 44567788999999999998744
No 302
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=35.65 E-value=1.1e+02 Score=21.50 Aligned_cols=39 Identities=13% Similarity=-0.061 Sum_probs=25.4
Q ss_pred HHHHhhhhhhhhhhch-------hHHHHHHHHHHHHHHHHhhhchh
Q 047275 49 LIASLFASKVTRALGR-------KASILVGGVAFLAGSALGGAAFN 87 (319)
Q Consensus 49 ~ig~~~~g~l~dr~GR-------r~~~~~~~~~~~~~~~~~~~a~~ 87 (319)
..+++..+++.+|.-+ ++.+..+.++-..+.++++...+
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555666666554 67788888877777777665433
No 303
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=32.03 E-value=2.3e+02 Score=21.53 Aligned_cols=80 Identities=11% Similarity=-0.000 Sum_probs=42.4
Q ss_pred HHHHHHHHHhhhhhhhhhhchh---HHHHHHHHHHHHHHHHhhhchhhhHH-----HHHHHHHhhhhhhccchhhHHHHh
Q 047275 44 PFIAGLIASLFASKVTRALGRK---ASILVGGVAFLAGSALGGAAFNVYML-----ILGRVLLGVGIGFSNQSVPLYLSE 115 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr---~~~~~~~~~~~~~~~~~~~a~~~~~l-----i~~R~l~Gig~g~~~~~~~~~i~e 115 (319)
..+|+.+|+..-=.+++.+.++ ..=........+++++.++...+..- --.|.+.+.|.-+..++-.++..|
T Consensus 10 V~~GG~lGa~~Ry~l~~~~~~~~~~~fP~gTl~VN~~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E 89 (127)
T PRK14200 10 IALGGAFGACSRYLVSELCVVLLGRGFPYGTLTVNVVGSFIMGLLIAAFENELLATEPWRQIIGLGFLGALTTFSTFSMD 89 (127)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHhccchhHHHHHHH
Confidence 4567777776533333222211 11123334455555554443222110 014667777877888888899999
Q ss_pred cCCCCCCc
Q 047275 116 MAPPKHRG 123 (319)
Q Consensus 116 ~~p~~~Rg 123 (319)
....-+++
T Consensus 90 ~~~l~~~~ 97 (127)
T PRK14200 90 NVLLMQQG 97 (127)
T ss_pred HHHHHHCC
Confidence 87654433
No 304
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=31.27 E-value=1.8e+02 Score=26.68 Aligned_cols=90 Identities=13% Similarity=0.113 Sum_probs=57.2
Q ss_pred hhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHH--HhhhchhhhHHHHHHHHHhhhhhhccchhhHHHH
Q 047275 37 LTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSA--LGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLS 114 (319)
Q Consensus 37 ~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~--~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~ 114 (319)
-+..-+..++.+.++++..|++--+|.|..-++++.....-+.. +++-..++|...++-.+-+.--....+.+..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 34556778888999999999999999888766666654444443 3444555555444444444444444555555666
Q ss_pred hcCCCCCCcchh
Q 047275 115 EMAPPKHRGAFN 126 (319)
Q Consensus 115 e~~p~~~Rg~~~ 126 (319)
+....+.-|..-
T Consensus 353 ~nL~~e~~gLvF 364 (433)
T KOG3810|consen 353 RNLSSELFGLVF 364 (433)
T ss_pred Hhhhhhhheeee
Confidence 666666666543
No 305
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=31.03 E-value=78 Score=27.69 Aligned_cols=50 Identities=24% Similarity=0.390 Sum_probs=29.7
Q ss_pred HHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHH---------HHHHHhcCCchHH-HHhhH
Q 047275 263 PVLFRTIKLSESTSLLMSAVVTGGVSTIATITS---------MILTDKLGRKVLF-LVGGI 313 (319)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------g~l~dr~Grr~~~-~~g~~ 313 (319)
-.++++.+.+..... +..++-.+...++++.. .+..||+|||... .+|.+
T Consensus 41 llfltqiglsp~~~A-mlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh~~gt~ 100 (412)
T KOG4830|consen 41 LLFLTQIGLSPSSRA-MLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWHLIGTV 100 (412)
T ss_pred HHHHHHhcCCcchhH-HHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeeeecccE
Confidence 344566666654444 44555555566666654 4678999999753 44433
No 306
>PRK10692 hypothetical protein; Provisional
Probab=30.16 E-value=1.1e+02 Score=21.44 Aligned_cols=18 Identities=33% Similarity=0.451 Sum_probs=13.7
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 047275 64 RKASILVGGVAFLAGSAL 81 (319)
Q Consensus 64 Rr~~~~~~~~~~~~~~~~ 81 (319)
||.+.+++++++.+|.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVV 20 (92)
T ss_pred chhhHHHhhHHHHHHHHH
Confidence 777888888887777664
No 307
>PRK14211 camphor resistance protein CrcB; Provisional
Probab=28.72 E-value=2.5e+02 Score=20.86 Aligned_cols=80 Identities=14% Similarity=0.042 Sum_probs=41.8
Q ss_pred HHHHHHHHHhhhhhhhhhhchhHHH-HHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCC
Q 047275 44 PFIAGLIASLFASKVTRALGRKASI-LVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHR 122 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr~~~-~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~R 122 (319)
..+|+.+|+..-=.++..+.++..+ .-......+++++.++......---.|.+.+.|.-+..++-.++..|....-++
T Consensus 6 V~~Gg~~Ga~~Ry~l~~~~~~~~~fP~gTl~vN~~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l~~~ 85 (114)
T PRK14211 6 VALGGALGATTRYLTGRYVDSYRSFPVATFLVNVAGCLILGLLSGASLSTQTFALLGTGFCGGLTTYSTFAVESVGLLRI 85 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHC
Confidence 4567777776644444333221111 123334445555544332221111246677777777788888898888754333
Q ss_pred c
Q 047275 123 G 123 (319)
Q Consensus 123 g 123 (319)
+
T Consensus 86 ~ 86 (114)
T PRK14211 86 R 86 (114)
T ss_pred C
Confidence 3
No 308
>PRK14220 camphor resistance protein CrcB; Provisional
Probab=28.71 E-value=2.5e+02 Score=21.02 Aligned_cols=78 Identities=14% Similarity=0.071 Sum_probs=41.4
Q ss_pred HHHHHHHHHhhhhhhhh----hhch-hHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCC
Q 047275 44 PFIAGLIASLFASKVTR----ALGR-KASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAP 118 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~d----r~GR-r~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p 118 (319)
..+|+.+|++.-=.+.. +++. ...=.-......+++++.++......---.|.+.|.|.-+..++-.++..|...
T Consensus 6 V~~GG~~Ga~lRy~l~~~~~~~~~~~~~fP~~Tl~VNi~GsfllG~l~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 85 (120)
T PRK14220 6 AGFGASIGAMLRYAITNYGKKHWEQFSNLPTPTLLINLTGAFILGLIFGRKFNPFIYALLGTGVLGGYTTFSTLNTELVS 85 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccCCccHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHccccccHHHHHHHHHH
Confidence 45677777766333333 3331 011122334455555554443322111125667777777788888888888875
Q ss_pred CCC
Q 047275 119 PKH 121 (319)
Q Consensus 119 ~~~ 121 (319)
.-+
T Consensus 86 l~~ 88 (120)
T PRK14220 86 LYK 88 (120)
T ss_pred HHH
Confidence 433
No 309
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=27.03 E-value=2.1e+02 Score=25.36 Aligned_cols=92 Identities=17% Similarity=0.126 Sum_probs=53.8
Q ss_pred hhHHhHHHHHHHHHHHhhhhhhhhhhchhH------HHHHHHHHHHHHHHHhhhchhhhH---HHHHHHHHhhhhhhccc
Q 047275 37 LTTFTSSPFIAGLIASLFASKVTRALGRKA------SILVGGVAFLAGSALGGAAFNVYM---LILGRVLLGVGIGFSNQ 107 (319)
Q Consensus 37 ~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~------~~~~~~~~~~~~~~~~~~a~~~~~---li~~R~l~Gig~g~~~~ 107 (319)
.+.+.+++.+..++|+-+..++..|-..|- ++.++...+.+..+....+++-.. =.++--+.-..+|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 456677777788889888888777655441 222333222222222222322211 12223333456777899
Q ss_pred hhhHHHHhcCCCCCCcchhhH
Q 047275 108 SVPLYLSEMAPPKHRGAFNIG 128 (319)
Q Consensus 108 ~~~~~i~e~~p~~~Rg~~~~~ 128 (319)
..+-+=++..|.+.|+..+..
T Consensus 364 SimkmRsqyIPEearstimNf 384 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNF 384 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhh
Confidence 999898999999999865433
No 310
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.86 E-value=2.5e+02 Score=20.41 Aligned_cols=31 Identities=6% Similarity=0.150 Sum_probs=15.9
Q ss_pred HHHHHHHHHhhccccCCC-cchHHHHHhhHHH
Q 047275 136 GVLGANLLNYGTQKIKGG-WGWRISLSMAAAP 166 (319)
Q Consensus 136 G~~~~~~~~~~~~~~~~~-~gWr~~f~~~~~~ 166 (319)
..+++..++.+++...++ ..|-.+|++.++.
T Consensus 55 pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 55 PTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 355566666665543222 3455555555544
No 311
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=26.27 E-value=2.9e+02 Score=23.20 Aligned_cols=53 Identities=21% Similarity=0.224 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHH
Q 047275 43 SPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAFNVYMLILGR 95 (319)
Q Consensus 43 ~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R 95 (319)
...+|+.+|..+..++.||+-+--+-..++....++--...-.+|....+++-
T Consensus 11 ~Il~G~iiG~l~~~klper~k~~l~~~~Gl~~l~iGI~m~~~~~n~~~~ilsl 63 (228)
T COG1811 11 AILIGGIIGLLIGKKLPERIKDILMQCLGLAILGIGIKMALQAKNDIMILLAL 63 (228)
T ss_pred HHHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 34567788888888899998766666666666666655555666666555443
No 312
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=25.04 E-value=1.4e+02 Score=20.88 Aligned_cols=18 Identities=33% Similarity=0.516 Sum_probs=13.4
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 047275 64 RKASILVGGVAFLAGSAL 81 (319)
Q Consensus 64 Rr~~~~~~~~~~~~~~~~ 81 (319)
||.+.+++++++.+|.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 677888888877777654
No 313
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=24.24 E-value=1.3e+02 Score=27.34 Aligned_cols=72 Identities=13% Similarity=0.174 Sum_probs=46.7
Q ss_pred CchhHHHhhhhhhhcccccCcccccccccCcchhhHHhHHHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhh
Q 047275 4 SMEPFLKKFFPEVYKNMREDTNVSNYCKFNSQLLTTFTSSPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGG 83 (319)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~ 83 (319)
..++....+.++.|+... |.. -...-+++-...-+|..++....+++.|++|-...+.++.+...++.+...
T Consensus 49 ~~K~ni~~~~~dq~~~~~-~~~-------~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 49 GIKPNISPFGADQYDEDD-DSR-------RDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp CCHHHHHHHHHHCSSTTT-TTH-------HHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHhcccc-hhh-------hhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 356666667776664321 000 012334555666778888888899999999999888888887777665543
No 314
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=24.08 E-value=3e+02 Score=20.34 Aligned_cols=61 Identities=20% Similarity=0.104 Sum_probs=24.7
Q ss_pred HHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHHhhhch---hhhHHHHHHHHHhhhhhh
Q 047275 44 PFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSALGGAAF---NVYMLILGRVLLGVGIGF 104 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~~~~a~---~~~~li~~R~l~Gig~g~ 104 (319)
..++.++|++..++-.++.|=-.-...+...+.+..++..... ....-...|.+..+..|+
T Consensus 47 ~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~lis~~~~~~~~~~~~~~~~~~~~~~~G~ 110 (116)
T PF12670_consen 47 YILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLISFLFGPGPFSGSSQLLKLLLCLLAGA 110 (116)
T ss_pred HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHH
Confidence 3444445555544444333322333333333333333332221 122334555555555544
No 315
>PRK14196 chromosome condensation membrane protein; Provisional
Probab=23.62 E-value=3.3e+02 Score=20.61 Aligned_cols=80 Identities=20% Similarity=0.110 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhhhhhhhhhchh--HHHHHHHHHHHHHHHHhhhchhhhH-----HHHHHHHHhhhhhhccchhhHHHHhc
Q 047275 44 PFIAGLIASLFASKVTRALGRK--ASILVGGVAFLAGSALGGAAFNVYM-----LILGRVLLGVGIGFSNQSVPLYLSEM 116 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr--~~~~~~~~~~~~~~~~~~~a~~~~~-----li~~R~l~Gig~g~~~~~~~~~i~e~ 116 (319)
..+|+.+|+..==.+++.+.++ ..-........+++++.++...+.. ---.|.+.+.|.-+..++-.++..|.
T Consensus 8 V~~Gg~~Ga~~Ry~l~~~~~~~~~~fP~gTl~vN~~GsfllG~l~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~ 87 (127)
T PRK14196 8 VFIGAGLGALLRWLLGLRLNPLFPALPLGTLAANLIGGYIIGVAVAWFARMPGLDPEWRLLIITGFCGGLTTFSTFSAEV 87 (127)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHhchhhhHHHHHHHH
Confidence 5567777776533333333221 1112344455556655544322210 01246677778778888888999998
Q ss_pred CCCCCCc
Q 047275 117 APPKHRG 123 (319)
Q Consensus 117 ~p~~~Rg 123 (319)
...-+++
T Consensus 88 ~~l~~~~ 94 (127)
T PRK14196 88 VTLLQEG 94 (127)
T ss_pred HHHHhCc
Confidence 7544433
No 316
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=23.17 E-value=1.5e+02 Score=19.41 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=20.0
Q ss_pred hhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCCCCc
Q 047275 87 NVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPKHRG 123 (319)
Q Consensus 87 ~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~~Rg 123 (319)
+++.+...-...+++.|...... .+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~-G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLA-GLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccCC
Confidence 34444555555555555544333 5778888875544
No 317
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=22.41 E-value=2.6e+02 Score=19.02 Aligned_cols=17 Identities=24% Similarity=0.382 Sum_probs=8.4
Q ss_pred HHHHHHHhhhhhhhhhh
Q 047275 46 IAGLIASLFASKVTRAL 62 (319)
Q Consensus 46 ~g~~ig~~~~g~l~dr~ 62 (319)
....+-+++.|+..+.+
T Consensus 18 ~~~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 18 IISAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344455555555544
No 318
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=22.29 E-value=3.1e+02 Score=23.20 Aligned_cols=39 Identities=15% Similarity=0.321 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhchhHHHHHHHHHHHHHHHH
Q 047275 43 SPFIAGLIASLFASKVTRALGRKASILVGGVAFLAGSAL 81 (319)
Q Consensus 43 ~~~~g~~ig~~~~g~l~dr~GRr~~~~~~~~~~~~~~~~ 81 (319)
...+|+.+|..+..++.||+-+.-.-..+++...+|--.
T Consensus 10 aIl~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~ 48 (226)
T PF04474_consen 10 AILLGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISM 48 (226)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 355688899999999999988777777777766666443
No 319
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=21.98 E-value=3.2e+02 Score=22.28 Aligned_cols=23 Identities=13% Similarity=0.258 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhch
Q 047275 42 SSPFIAGLIASLFASKVTRALGR 64 (319)
Q Consensus 42 ~~~~~g~~ig~~~~g~l~dr~GR 64 (319)
.-+.++..+++.+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 34566778888999999999875
No 320
>PRK14201 camphor resistance protein CrcB; Provisional
Probab=20.80 E-value=3.7e+02 Score=20.12 Aligned_cols=79 Identities=15% Similarity=0.081 Sum_probs=41.1
Q ss_pred HHHHHHHHHhhhhhhhhhhch-hHHHHHHHHHHHHHHHHhhhchhhhHH-----HHHHHHHhhhhhhccchhhHHHHhcC
Q 047275 44 PFIAGLIASLFASKVTRALGR-KASILVGGVAFLAGSALGGAAFNVYML-----ILGRVLLGVGIGFSNQSVPLYLSEMA 117 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GR-r~~~~~~~~~~~~~~~~~~~a~~~~~l-----i~~R~l~Gig~g~~~~~~~~~i~e~~ 117 (319)
..+|+.+|++.==.+. +.-+ ...-....+...+++++.++......- =-.|.+.+.|.-+..++-.++..|..
T Consensus 6 V~~Gg~~Ga~~R~~l~-~~~~~~~fP~gTl~vN~~G~fllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~~ 84 (121)
T PRK14201 6 IFIGGALGALLRYLLS-FLNTDGGFPIGTLIANLTGAFLMGLLTALTIAFFSNHPTLKKAITTGFLGALTTFSTFQFELI 84 (121)
T ss_pred HHHHHHHHHHHHHHHH-hHhccCCchHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhhccCcccchHHHHHHH
Confidence 4566777775422222 1111 111123444555566555544322110 01466677777778888888999887
Q ss_pred CCCCCc
Q 047275 118 PPKHRG 123 (319)
Q Consensus 118 p~~~Rg 123 (319)
..-+++
T Consensus 85 ~l~~~~ 90 (121)
T PRK14201 85 HMFDHQ 90 (121)
T ss_pred HHHHCC
Confidence 543333
No 321
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=20.79 E-value=2.2e+02 Score=17.64 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=18.3
Q ss_pred HHHHHHHHhhhhhhhh-hhchhHHHHHHHHHHHHH
Q 047275 45 FIAGLIASLFASKVTR-ALGRKASILVGGVAFLAG 78 (319)
Q Consensus 45 ~~g~~ig~~~~g~l~d-r~GRr~~~~~~~~~~~~~ 78 (319)
+....+...+.|+..| ++|.++...+..++..+.
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 3344444445555555 688866655554444443
No 322
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=20.76 E-value=3.7e+02 Score=20.12 Aligned_cols=80 Identities=16% Similarity=0.076 Sum_probs=41.4
Q ss_pred HHHHHHHHHhhhhhhhhhhchh---HHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCCC
Q 047275 44 PFIAGLIASLFASKVTRALGRK---ASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPPK 120 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~dr~GRr---~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~~ 120 (319)
..+|+.+|+..-=.++....++ ..-.-......+++++.++......---.|.+.+.|.-+..++-.++..|....-
T Consensus 6 V~~Gg~~Ga~~R~~l~~~~~~~~~~~fp~gTl~VN~~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l~ 85 (120)
T PRK14232 6 VGIGGAFGSLARYQLGKVISKKSKSTFPVGTFIINITGAILLGIVSSSNISKNMYLLLGDGFLGAYTTFSTFMYEGFNLF 85 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 4567777776533333322221 1112334445555555444321111112456667777777888888999887644
Q ss_pred CCc
Q 047275 121 HRG 123 (319)
Q Consensus 121 ~Rg 123 (319)
+++
T Consensus 86 ~~~ 88 (120)
T PRK14232 86 QEK 88 (120)
T ss_pred HCC
Confidence 333
No 323
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=20.53 E-value=3.5e+02 Score=21.10 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhchhH
Q 047275 42 SSPFIAGLIASLFASKVTRALGRKA 66 (319)
Q Consensus 42 ~~~~~g~~ig~~~~g~l~dr~GRr~ 66 (319)
.-+.+|..+.+.+.|++.+|..|++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4466677888899999999988764
No 324
>PRK14205 camphor resistance protein CrcB; Provisional
Probab=20.24 E-value=3.8e+02 Score=20.01 Aligned_cols=80 Identities=13% Similarity=0.047 Sum_probs=41.3
Q ss_pred HHHHHHHHHhhhhhhhh----hhchhHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHhhhhhhccchhhHHHHhcCCC
Q 047275 44 PFIAGLIASLFASKVTR----ALGRKASILVGGVAFLAGSALGGAAFNVYMLILGRVLLGVGIGFSNQSVPLYLSEMAPP 119 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~d----r~GRr~~~~~~~~~~~~~~~~~~~a~~~~~li~~R~l~Gig~g~~~~~~~~~i~e~~p~ 119 (319)
..+|+.+|+..-=.++. +++.+. =.-..+...+++++.++......---.|.+.+.|.-+..++-.++..|....
T Consensus 7 V~~Gg~~Ga~lRy~l~~~~~~~~~~~f-P~gT~~vNv~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 85 (118)
T PRK14205 7 VATGGFFGAITRFAISNWFKKRNKTSF-PIATFLINITGAFLLGYIIGNGVTTGWQLLLGTGFMGAFTTFSTFKLESVQL 85 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCC-chHHHHHHHHHHHHHHHHHHhccCHHHHHHHHhhhccccccHHHHHHHHHHH
Confidence 45677777765333332 222111 1123334444555444332111101246667777777788888899998765
Q ss_pred CCCcc
Q 047275 120 KHRGA 124 (319)
Q Consensus 120 ~~Rg~ 124 (319)
-+++.
T Consensus 86 ~~~~~ 90 (118)
T PRK14205 86 LNRKN 90 (118)
T ss_pred HHCCC
Confidence 44443
No 325
>PRK14233 camphor resistance protein CrcB; Provisional
Probab=20.10 E-value=4.1e+02 Score=20.34 Aligned_cols=79 Identities=14% Similarity=0.100 Sum_probs=42.7
Q ss_pred HHHHHHHHHhhhhhhhh----hhchhHHHHHHHHHHHHHHHHhhhchhhhHH-------HHHHHHHhhhhhhccchhhHH
Q 047275 44 PFIAGLIASLFASKVTR----ALGRKASILVGGVAFLAGSALGGAAFNVYML-------ILGRVLLGVGIGFSNQSVPLY 112 (319)
Q Consensus 44 ~~~g~~ig~~~~g~l~d----r~GRr~~~~~~~~~~~~~~~~~~~a~~~~~l-------i~~R~l~Gig~g~~~~~~~~~ 112 (319)
..+|+.+|+..-=.++. +++.+. -.-......+++++.++...+..- =-.|.+.+.|.-+..++-.++
T Consensus 9 V~~Gg~~GA~lRy~l~~~~~~~~~~~f-P~gTl~VNv~G~fllG~l~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf 87 (133)
T PRK14233 9 VLVGGFIGGVMRFFLSGYVGRRIGETF-PWGTFVVNVSGAFVIGTAAGLGARLGGIFSTTIFHEFIMVGLLGGYTTVSSF 87 (133)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCC-chHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHccccccHHHH
Confidence 55677788765323332 223221 123344555556555443322110 124667777777888888899
Q ss_pred HHhcCCCCCCc
Q 047275 113 LSEMAPPKHRG 123 (319)
Q Consensus 113 i~e~~p~~~Rg 123 (319)
..|....-+++
T Consensus 88 ~~E~~~l~~~~ 98 (133)
T PRK14233 88 CLQSVNLMLDG 98 (133)
T ss_pred HHHHHHHHHCC
Confidence 99987643333
Done!