BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047276
(453 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 174/303 (57%), Gaps = 17/303 (5%)
Query: 92 KFRSKELEEATDNF--QALLGHGSSASVFKGILSDGTSVAVKRINGE--ENGEKEFRSEV 147
+F +EL+ A+DNF + +LG G V+KG L+DGT VAVKR+ E + GE +F++EV
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 148 AAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
I+ A H NL+RL G+C+ P R LVY ++ NGS+ S E S L W
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPT-ERLLVYPYMANGSV------ASCLRERPESQPPLDWP 139
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC 267
R R+A+ A+ L+YLH+ C +++H DVK NILLDE + AVV DFGL+KLM
Sbjct: 140 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 199
Query: 268 ITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQY 327
+RGT G++APE++ SEK D++ YG++LLEL G+R L ND +
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 328 FPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARVVEM 387
++ EK KL +VD L +G + +V +L+ VA C Q RP M+ VV M
Sbjct: 260 VKGLLKEK----KLEALVDVDL--QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 388 LEG 390
LEG
Sbjct: 314 LEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 172/303 (56%), Gaps = 17/303 (5%)
Query: 92 KFRSKELEEATDNF--QALLGHGSSASVFKGILSDGTSVAVKRINGE--ENGEKEFRSEV 147
+F +EL+ A+DNF + +LG G V+KG L+DG VAVKR+ E + GE +F++EV
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 148 AAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
I+ A H NL+RL G+C+ P R LVY ++ NGS+ S E S L W
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPT-ERLLVYPYMANGSV------ASCLRERPESQPPLDWP 131
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC 267
R R+A+ A+ L+YLH+ C +++H DVK NILLDE + AVV DFGL+KLM
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 191
Query: 268 ITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQY 327
+RG G++APE++ SEK D++ YG++LLEL G+R L ND +
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 328 FPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARVVEM 387
++ EK KL +VD L +G + +V +L+ VA C Q RP M+ VV M
Sbjct: 252 VKGLLKEK----KLEALVDVDL--QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 388 LEG 390
LEG
Sbjct: 306 LEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 166/304 (54%), Gaps = 36/304 (11%)
Query: 97 ELEEATDNF--QALLGHGSSASVFKGILSDGTSVAVKRINGEEN-GEKEFRSEVAAIASA 153
+LEEAT+NF + L+GHG V+KG+L DG VA+KR E + G +EF +E+ ++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 154 QHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
+H +LV L+G+C L+Y++++NG+L ++ + + +SW+ R +
Sbjct: 93 RHPHLVSLIGFCD-ERNEMILIYKYMENGNLKRHLYGSDLPTMS------MSWEQRLEIC 145
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIR 272
I A+ L YLH ++H DVK NILLDEN+ ++DFG+SK + DQ+ ++
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK 202
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPK-I 331
GT GY+ PE+ ++ ++EK D+YS+G+VL E+ R + Q P+ +
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV-------------QSLPREM 249
Query: 332 VN------EKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARVV 385
VN E G+L +IVD L D+ I +R+ D A C+ + RPSM V+
Sbjct: 250 VNLAEWAVESHNNGQLEQIVDPNLADK--IRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
Query: 386 EMLE 389
LE
Sbjct: 308 WKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 165/304 (54%), Gaps = 36/304 (11%)
Query: 97 ELEEATDNF--QALLGHGSSASVFKGILSDGTSVAVKRINGEEN-GEKEFRSEVAAIASA 153
+LEEAT+NF + L+GHG V+KG+L DG VA+KR E + G +EF +E+ ++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 154 QHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
+H +LV L+G+C L+Y++++NG+L ++ + + +SW+ R +
Sbjct: 93 RHPHLVSLIGFCD-ERNEMILIYKYMENGNLKRHLYGSDLPTMS------MSWEQRLEIC 145
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIR 272
I A+ L YLH ++H DVK NILLDEN+ ++DFG+SK + Q+ ++
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK 202
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPK-I 331
GT GY+ PE+ ++ ++EK D+YS+G+VL E+ R + Q P+ +
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV-------------QSLPREM 249
Query: 332 VN------EKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARVV 385
VN E G+L +IVD L D+ I +R+ D A C+ + RPSM V+
Sbjct: 250 VNLAEWAVESHNNGQLEQIVDPNLADK--IRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
Query: 386 EMLE 389
LE
Sbjct: 308 WKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 155/315 (49%), Gaps = 37/315 (11%)
Query: 93 FRSKELEEATDNFQA--------LLGHGSSASVFKGILSDGTSVAVKRING-----EENG 139
F EL+ T+NF +G G V+KG +++ T+VAVK++ E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
+++F E+ +A QH NLV LLG+ G LVY ++ NGSL R
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSS-DGDDLCLVYVYMPNGSL-------LDRLSCLD 125
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
LSW +R ++A A +++LH + +H D+K NILLDE + A +SDFGL++
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 260 MSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGN 318
+ Q+ + I GT Y+APE L ++ K DIYS+G+VLLE+ G V
Sbjct: 183 SEKFAQTVMXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAV------- 234
Query: 319 DKSKNKWQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLR 378
D+ + + +E + + +D+++ D D T V + VA C+ E+ R
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKR 291
Query: 379 PSMARVVEMLEGRVA 393
P + +V ++L+ A
Sbjct: 292 PDIKKVQQLLQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 154/315 (48%), Gaps = 37/315 (11%)
Query: 93 FRSKELEEATDNFQA--------LLGHGSSASVFKGILSDGTSVAVKRING-----EENG 139
F EL+ T+NF +G G V+KG +++ T+VAVK++ E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
+++F E+ +A QH NLV LLG+ G LVY ++ NGSL R
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSS-DGDDLCLVYVYMPNGSL-------LDRLSCLD 125
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
LSW +R ++A A +++LH + +H D+K NILLDE + A +SDFGL++
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 260 MSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGN 318
+ Q+ I GT Y+APE L ++ K DIYS+G+VLLE+ G V
Sbjct: 183 SEKFAQTVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAV------- 234
Query: 319 DKSKNKWQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLR 378
D+ + + +E + + +D+++ D D T V + VA C+ E+ R
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKR 291
Query: 379 PSMARVVEMLEGRVA 393
P + +V ++L+ A
Sbjct: 292 PDIKKVQQLLQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 37/315 (11%)
Query: 93 FRSKELEEATDNFQA--------LLGHGSSASVFKGILSDGTSVAVKRING-----EENG 139
F EL+ T+NF +G G V+KG +++ T+VAVK++ E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
+++F E+ +A QH NLV LLG+ G LVY ++ NGSL R
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSS-DGDDLCLVYVYMPNGSL-------LDRLSCLD 119
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
LSW +R ++A A +++LH + +H D+K NILLDE + A +SDFGL++
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 260 MSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGN 318
+ Q I GT Y+APE L ++ K DIYS+G+VLLE+ G V
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAV------- 228
Query: 319 DKSKNKWQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLR 378
D+ + + +E + + +D+++ D D T V + VA C+ E+ R
Sbjct: 229 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA---DSTSVEAMYSVASQCLHEKKNKR 285
Query: 379 PSMARVVEMLEGRVA 393
P + +V ++L+ A
Sbjct: 286 PDIKKVQQLLQEMTA 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 147/315 (46%), Gaps = 37/315 (11%)
Query: 93 FRSKELEEATDNFQA--------LLGHGSSASVFKGILSDGTSVAVKRING-----EENG 139
F EL+ T+NF G G V+KG +++ T+VAVK++ E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
+++F E+ A QH NLV LLG+ G LVY + NGSL R
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSS-DGDDLCLVYVYXPNGSL-------LDRLSCLD 116
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
LSW R ++A A +++LH + +H D+K NILLDE + A +SDFGL++
Sbjct: 117 GTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 173
Query: 260 MSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGN 318
+ Q + I GT Y APE L ++ K DIYS+G+VLLE+ G V
Sbjct: 174 SEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV------- 225
Query: 319 DKSKNKWQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLR 378
D+ + + +E + + +D++ D D T V VA C+ E+ R
Sbjct: 226 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKXND---ADSTSVEAXYSVASQCLHEKKNKR 282
Query: 379 PSMARVVEMLEGRVA 393
P + +V ++L+ A
Sbjct: 283 PDIKKVQQLLQEXTA 297
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 22/209 (10%)
Query: 104 NFQALLGHGSSASVFKGILSDGTSVAVKRINGEE-NGEK--EFRSEVAAIASAQHVNLVR 160
N + +G GS +V + G+ VAVK + ++ + E+ EF EVA + +H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV--AIDVAK 218
+G P +V E++ GSL + H SG D R R+ A DVAK
Sbjct: 99 FMGAVTQPPN-LSIVTEYLSRGSLYRLL---------HKSGAREQLDERRRLSMAYDVAK 148
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT--IRGTRG 276
++YLHN ++H D+K N+L+D+ Y V DFGLS+L + S + + GT
Sbjct: 149 GMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA---SXFLXSKXAAGTPE 204
Query: 277 YLAPEWILEQGVSEKCDIYSYGMVLLELT 305
++APE + ++ +EK D+YS+G++L EL
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELA 233
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 18/207 (8%)
Query: 104 NFQALLGHGSSASVFKGILSDGTSVAVKRINGEE-NGEK--EFRSEVAAIASAQHVNLVR 160
N + +G GS +V + G+ VAVK + ++ + E+ EF EVA + +H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV--AIDVAK 218
+G P +V E++ GSL + H SG D R R+ A DVAK
Sbjct: 99 FMGAVTQPPN-LSIVTEYLSRGSLYRLL---------HKSGAREQLDERRRLSMAYDVAK 148
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
++YLHN ++H ++K N+L+D+ Y V DFGLS+L + + GT ++
Sbjct: 149 GMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA-STFLSSKSAAGTPEWM 206
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELT 305
APE + ++ +EK D+YS+G++L EL
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWELA 233
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
+G G V G G VAVK I + + F +E + + +H NLV+LLG V
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
G Y+V E++ GSL ++ R G G CL + ++DV +A+ YL +
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCL-----LKFSLDVCEAMEYLEGN-- 121
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D+ N+L+ E+ A VSDFGL+K S Q ++ T APE + E+
Sbjct: 122 -NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKF 176
Query: 289 SEKCDIYSYGMVLLEL 304
S K D++S+G++L E+
Sbjct: 177 STKSDVWSFGILLWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 125 GTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
G VAVK I + + F +E + + +H NLV+LLG V G Y+V E++ GSL
Sbjct: 44 GNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102
Query: 185 DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD 244
++ R G G CL + ++DV +A+ YL + +H D+ N+L+
Sbjct: 103 VDYLRSRGRSVLG---GDCL-----LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVS 151
Query: 245 ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
E+ A VSDFGL+K S Q ++ T APE + E+ S K D++S+G++L E+
Sbjct: 152 EDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 125 GTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
G VAVK I + + F +E + + +H NLV+LLG V G Y+V E++ GSL
Sbjct: 35 GNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 93
Query: 185 DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD 244
++ R G G CL + ++DV +A+ YL + +H D+ N+L+
Sbjct: 94 VDYLRSRGRSVLG---GDCL-----LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVS 142
Query: 245 ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
E+ A VSDFGL+K S Q ++ T APE + E S K D++S+G++L E+
Sbjct: 143 EDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKSDVWSFGILLWEI 198
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
+G G V G G VAVK I + + F +E + + +H NLV+LLG V
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
G Y+V E++ GSL ++ R G G CL + ++DV +A+ YL +
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCL-----LKFSLDVCEAMEYLEGN-- 308
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D+ N+L+ E+ A VSDFGL+K S Q ++ T APE + E+
Sbjct: 309 -NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKF 363
Query: 289 SEKCDIYSYGMVLLEL 304
S K D++S+G++L E+
Sbjct: 364 STKSDVWSFGILLWEI 379
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 36/251 (14%)
Query: 92 KFRSKELEEATDN---FQALLGHGSSASVFKG-ILSDGTSVAVKR-INGEENGE------ 140
+F L DN ++ +G G V KG ++ D + VA+K I G+ GE
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 141 -KEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
+EF+ EV +++ H N+V+L G P PR +V EF+ G L H + +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNP--PR-MVMEFVPCGDLYHRLLDKAHP----- 118
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL---DENYR--AVVSDF 254
+ W ++ R+ +D+A + Y+ N ++H D++ NI L DEN A V+DF
Sbjct: 119 ----IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 255 GLSKLMSRDQSRCITTIRGTRGYLAPEWI--LEQGVSEKCDIYSYGMVLLELTGGRRNVS 312
GLS+ ++ + G ++APE I E+ +EK D YS+ M+L + G
Sbjct: 174 GLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 313 LIEHGNDKSKN 323
+G K N
Sbjct: 230 EYSYGKIKFIN 240
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ +S + +A
Sbjct: 67 PNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQ 117
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 118 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ +S + +A
Sbjct: 67 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQ 117
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 118 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 88 GVPIKFRSKELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSE 146
G+ + E+E + LG G V++G+ + +VAVK + + +EF E
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 147 VAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSW 206
A + +H NLV+LLG C P Y++ EF+ G+L ++ +R+ ++
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VNA 111
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
+ +A ++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D
Sbjct: 112 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 168
Query: 267 CITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + APE + S K D++++G++L E+
Sbjct: 169 APAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ +S + +A
Sbjct: 69 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQ 119
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ +S + +A
Sbjct: 69 PNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQ 119
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ +S + +A
Sbjct: 69 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQ 119
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ +S + +A
Sbjct: 74 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQ 124
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ +S + +A
Sbjct: 67 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQ 117
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 118 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI 174
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ +S + +A
Sbjct: 69 PNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQ 119
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 71 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 121
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 122 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI 178
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 70 PNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 120
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 121 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 177
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 13/220 (5%)
Query: 86 VAGVPIKFRSKELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFR 144
+ GV + E+E + LG G V++G+ + +VAVK + + +EF
Sbjct: 205 IYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 264
Query: 145 SEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
E A + +H NLV+LLG C P Y++ EF+ G+L ++ +R+ +
Sbjct: 265 KEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQE--------V 315
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ 264
S + +A ++ A+ YL + +H ++ N L+ EN+ V+DFGLS+LM+ D
Sbjct: 316 SAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372
Query: 265 SRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + APE + S K D++++G++L E+
Sbjct: 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 71 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 121
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 122 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 74 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 124
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 181
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 71 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 121
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 122 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 36/251 (14%)
Query: 92 KFRSKELEEATDN---FQALLGHGSSASVFKG-ILSDGTSVAVKR-INGEENGE------ 140
+F L DN ++ +G G V KG ++ D + VA+K I G+ GE
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 141 -KEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
+EF+ EV +++ H N+V+L G P PR +V EF+ G L H + +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNP--PR-MVMEFVPCGDLYHRLLDKAHP----- 118
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL---DENYR--AVVSDF 254
+ W ++ R+ +D+A + Y+ N ++H D++ NI L DEN A V+DF
Sbjct: 119 ----IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 255 GLSKLMSRDQSRCITTIRGTRGYLAPEWI--LEQGVSEKCDIYSYGMVLLELTGGRRNVS 312
G S+ ++ + G ++APE I E+ +EK D YS+ M+L + G
Sbjct: 174 G----TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 313 LIEHGNDKSKN 323
+G K N
Sbjct: 230 EYSYGKIKFIN 240
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 69 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 119
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 74 PNLVQLLGVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 124
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 74 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 124
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 13/220 (5%)
Query: 86 VAGVPIKFRSKELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFR 144
V GV + E+E + LG G V++G+ + +VAVK + + +EF
Sbjct: 202 VYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 261
Query: 145 SEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
E A + +H NLV+LLG C P Y++ EF+ G+L ++ +R+ +
Sbjct: 262 KEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQE--------V 312
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ 264
+ + +A ++ A+ YL + +H ++ N L+ EN+ V+DFGLS+LM+ D
Sbjct: 313 NAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 369
Query: 265 SRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + APE + S K D++++G++L E+
Sbjct: 370 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 74 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 124
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 69 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 119
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 81
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 82 PNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 132
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 133 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 189
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 190 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V++G+ + +VAVK + + +EF E A + +H
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 72
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C P Y++ EF+ G+L ++ +R+ ++ + +A
Sbjct: 73 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQ 123
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 124 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 180
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 36/251 (14%)
Query: 92 KFRSKELEEATDN---FQALLGHGSSASVFKG-ILSDGTSVAVKR-INGEENGE------ 140
+F L DN ++ +G G V KG ++ D + VA+K I G+ GE
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 141 -KEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
+EF+ EV +++ H N+V+L G P PR +V EF+ G L H + +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNP--PR-MVMEFVPCGDLYHRLLDKAHP----- 118
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL---DENYR--AVVSDF 254
+ W ++ R+ +D+A + Y+ N ++H D++ NI L DEN A V+DF
Sbjct: 119 ----IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 255 GLSKLMSRDQSRCITTIRGTRGYLAPEWI--LEQGVSEKCDIYSYGMVLLELTGGRRNVS 312
LS+ ++ + G ++APE I E+ +EK D YS+ M+L + G
Sbjct: 174 SLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 313 LIEHGNDKSKN 323
+G K N
Sbjct: 230 EYSYGKIKFIN 240
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 13/220 (5%)
Query: 86 VAGVPIKFRSKELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFR 144
V GV + E+E + LG G V++G+ + +VAVK + + +EF
Sbjct: 244 VYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 303
Query: 145 SEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
E A + +H NLV+LLG C P Y++ EF+ G+L ++ +R+ +
Sbjct: 304 KEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQE--------V 354
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ 264
+ + +A ++ A+ YL + +H ++ N L+ EN+ V+DFGLS+LM+ D
Sbjct: 355 NAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 411
Query: 265 SRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + APE + S K D++++G++L E+
Sbjct: 412 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGT-SVAVKRINGEENGEKEFRSEVAAIASAQH 155
E+E + LG G V+ G+ + +VAVK + + +EF E A + +H
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 87
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
NLV+LLG C + P Y+V E++ G+L ++ +R ++ + +A
Sbjct: 88 PNLVQLLGVCTLEP-PFYIVTEYMPYGNLLDYLRECNREE--------VTAVVLLYMATQ 138
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
++ A+ YL + +H D+ N L+ EN+ V+DFGLS+LM+ D +
Sbjct: 139 ISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI 195
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ APE + S K D++++G++L E+
Sbjct: 196 KWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 94 RSKELEEATD--NFQALLGHGSSASVFKGILSDGTS----VAVKRINGE--ENGEKEFRS 145
R K+ E+ D +F+ +LG G+ + V IL++ VA+K I E E E +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLS 205
E+A + +H N+V L GG YL+ + + G L I +E S
Sbjct: 66 EIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----- 119
Query: 206 WDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENIL---LDENYRAVVSDFGLSKLMSR 262
R+ V A+ YLH+ ++H D+KPEN+L LDE+ + ++SDFGLSK+
Sbjct: 120 -----RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--E 169
Query: 263 DQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
D ++T GT GY+APE + ++ S+ D +S G++ L G
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 91 IKFRSKELEEATDNFQALLGHGSSASVFKGILSDGT-----SVAVKRING--EENGEKEF 143
+KF + E+ + Q ++G G V+KG+L + VA+K + E +F
Sbjct: 35 LKF-TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF 93
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
E + H N++RL G + P ++ E+++NG+LD ++ R +G +S
Sbjct: 94 LGEAGIMGQFSHHNIIRLEG-VISKYKPMMIITEYMENGALDKFL----REKDGEFSVLQ 148
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD 263
L LR +A + YL N +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 149 LVGMLR-----GIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200
Query: 264 QSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLE-LTGGRR 309
TT G + APE I + + D++S+G+V+ E +T G R
Sbjct: 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 94 RSKELEEATD--NFQALLGHGSSASVFKGILSDGTS----VAVKRINGE--ENGEKEFRS 145
R K+ E+ D +F+ +LG G+ + V IL++ VA+K I E E E +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLS 205
E+A + +H N+V L GG YL+ + + G L I +E S
Sbjct: 66 EIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----- 119
Query: 206 WDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENIL---LDENYRAVVSDFGLSKLMSR 262
R+ V A+ YLH+ ++H D+KPEN+L LDE+ + ++SDFGLSK+
Sbjct: 120 -----RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--E 169
Query: 263 DQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
D ++T GT GY+APE + ++ S+ D +S G++ L G
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 94 RSKELEEATD--NFQALLGHGSSASVFKGILSDGTS----VAVKRINGE--ENGEKEFRS 145
R K+ E+ D +F+ +LG G+ + V IL++ VA+K I E E E +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLS 205
E+A + +H N+V L GG YL+ + + G L I +E S
Sbjct: 66 EIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----- 119
Query: 206 WDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENIL---LDENYRAVVSDFGLSKLMSR 262
R+ V A+ YLH+ ++H D+KPEN+L LDE+ + ++SDFGLSK+
Sbjct: 120 -----RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--E 169
Query: 263 DQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
D ++T GT GY+APE + ++ S+ D +S G++ L G
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 104 NFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG 163
F +G G V G + VA+K I E++F E + H LV+L G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C+ P LV+EF+++G L ++ R G ++ L + +DV + ++YL
Sbjct: 68 VCL-EQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLDVCEGMAYL 117
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
C V+H D+ N L+ EN VSDFG+++ + DQ T + + +PE
Sbjct: 118 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 174
Query: 284 LEQGVSEKCDIYSYGMVLLEL 304
S K D++S+G+++ E+
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEV 195
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 104 NFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG 163
F +G G V G + VA+K I E++F E + H LV+L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C+ P LV+EF+++G L ++ R G ++ L + +DV + ++YL
Sbjct: 70 VCL-EQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLDVCEGMAYL 119
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
C V+H D+ N L+ EN VSDFG+++ + DQ T + + +PE
Sbjct: 120 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 284 LEQGVSEKCDIYSYGMVLLEL 304
S K D++S+G+++ E+
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEV 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 104 NFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG 163
F +G G V G + VA+K I E++F E + H LV+L G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C+ P LV+EF+++G L ++ R G ++ L + +DV + ++YL
Sbjct: 73 VCL-EQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLDVCEGMAYL 122
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
C V+H D+ N L+ EN VSDFG+++ + DQ T + + +PE
Sbjct: 123 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 179
Query: 284 LEQGVSEKCDIYSYGMVLLEL 304
S K D++S+G+++ E+
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEV 200
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 104 NFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG 163
F +G G V G + VA+K I E +F E + H LV+L G
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C+ P LV+EF+++G L ++ R G ++ L + +DV + ++YL
Sbjct: 90 VCL-EQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLDVCEGMAYL 139
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
C V+H D+ N L+ EN VSDFG+++ + DQ T + + +PE
Sbjct: 140 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 196
Query: 284 LEQGVSEKCDIYSYGMVLLEL 304
S K D++S+G+++ E+
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEV 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 109/201 (54%), Gaps = 18/201 (8%)
Query: 109 LGHGSSASVFKGI-LSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVRLLGYCV 166
+G G+S +V+ + ++ G VA++++N ++ +KE +E+ + ++ N+V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHND 226
V G ++V E++ GSL + T EG + C + +AL +LH++
Sbjct: 88 V-GDELWVVMEYLAGGSLTDVVTETCM-DEGQIAAVCR----------ECLQALEFLHSN 135
Query: 227 CRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQ 286
+V+H D+K +NILL + ++DFG ++ +QS+ +T+ GT ++APE + +
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRK 191
Query: 287 GVSEKCDIYSYGMVLLELTGG 307
K DI+S G++ +E+ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILS----DGTSVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + + ++G G V G L +VA+K ++ E ++F E +
Sbjct: 37 AKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEAS 96
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N+V L G V G P +V EF++NG+LD ++ R+ +G ++ L L
Sbjct: 97 IMGQFDHPNVVHLEG-VVTRGKPVMIVIEFMENGALDAFL----RKHDGQFTVIQLVGML 151
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 152 R-----GIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVY 203
Query: 269 TTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT G + APE I + + D++SYG+V+ E+
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEV 241
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 30/223 (13%)
Query: 91 IKFRSKELEEATDNFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAI 150
I ++ E+EE ++G G+ V K VA+K+I E K F E+ +
Sbjct: 6 IDYKEIEVEE-------VVGRGAFGVVCKAKWR-AKDVAIKQIESESE-RKAFIVELRQL 56
Query: 151 ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLD---HWIFPTSRRSEGHYSGGCLSWD 207
+ H N+V+L G C+ P LV E+ + GSL H P + H +SW
Sbjct: 57 SRVNHPNIVKLYGACL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAH----AMSWC 109
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSR 266
L+ ++ ++YLH+ ++H D+KP N+LL + + DFG + D
Sbjct: 110 LQ------CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG----TACDIQT 159
Query: 267 CITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRR 309
+T +G+ ++APE SEKCD++S+G++L E+ R+
Sbjct: 160 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 30/223 (13%)
Query: 91 IKFRSKELEEATDNFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAI 150
I ++ E+EE ++G G+ V K VA+K+I E K F E+ +
Sbjct: 5 IDYKEIEVEE-------VVGRGAFGVVCKAKWR-AKDVAIKQIESESE-RKAFIVELRQL 55
Query: 151 ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLD---HWIFPTSRRSEGHYSGGCLSWD 207
+ H N+V+L G C+ P LV E+ + GSL H P + H CL
Sbjct: 56 SRVNHPNIVKLYGACL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL--- 109
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSR 266
++ ++YLH+ ++H D+KP N+LL + + DFG + D
Sbjct: 110 -------QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG----TACDIQT 158
Query: 267 CITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRR 309
+T +G+ ++APE SEKCD++S+G++L E+ R+
Sbjct: 159 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 99 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 153
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 154 R-----GIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 206 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 27 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 86
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 87 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 141
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 142 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 193
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 194 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 10 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 70 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 124
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 125 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 177 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 99 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 153
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 154 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 206 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 99 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 153
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 154 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 206 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 94 RSKELEEATD--NFQALLGHGSSASVFKGILSDGTS----VAVKRINGE--ENGEKEFRS 145
R K+ E+ D +F+ +LG G+ + V IL++ VA+K I + E E +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMEN 65
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLS 205
E+A + +H N+V L GG YL+ + + G L I +E S
Sbjct: 66 EIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----- 119
Query: 206 WDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENIL---LDENYRAVVSDFGLSKLMSR 262
R+ V A+ YLH+ ++H D+KPEN+L LDE+ + ++SDFGLSK+
Sbjct: 120 -----RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--E 169
Query: 263 DQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
D ++T GT GY+APE + ++ S+ D +S G++ L G
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 99 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 153
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 154 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 206 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 99 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 153
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 154 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 206 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 37 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 96
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 97 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 151
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 152 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 203
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 204 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 241
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 104 NFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG 163
F +G G V G + VA+K I E++F E + H LV+L G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C+ P LV EF+++G L ++ R G ++ L + +DV + ++YL
Sbjct: 71 VCL-EQAPICLVTEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLDVCEGMAYL 120
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
C V+H D+ N L+ EN VSDFG+++ + DQ T + + +PE
Sbjct: 121 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 177
Query: 284 LEQGVSEKCDIYSYGMVLLEL 304
S K D++S+G+++ E+
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEV 198
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 109 LGHGSSASVFKGILSDGT----SVAVKRI----NGEENGEKEFRSEVAAIASAQHVNLVR 160
LG G ++V+ L++ T VA+K I +E K F EV + H N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 161 LLGY-----CVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
++ C YLV E+I+ +L +I E H G LS D
Sbjct: 76 MIDVDEEDDCY------YLVMEYIEGPTLSEYI-------ESH---GPLSVDTAINFTNQ 119
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + + H+ R++H D+KP+NIL+D N + DFG++K +S + GT
Sbjct: 120 ILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
Y +PE + E DIYS G+VL E+ G
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 109/201 (54%), Gaps = 18/201 (8%)
Query: 109 LGHGSSASVFKGI-LSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVRLLGYCV 166
+G G+S +V+ + ++ G VA++++N ++ +KE +E+ + ++ N+V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHND 226
V G ++V E++ GSL + T EG + C + +AL +LH++
Sbjct: 89 V-GDELWVVMEYLAGGSLTDVVTETCM-DEGQIAAVCR----------ECLQALEFLHSN 136
Query: 227 CRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQ 286
+V+H ++K +NILL + ++DFG ++ +QS+ +T+ GT ++APE + +
Sbjct: 137 ---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPYWMAPEVVTRK 192
Query: 287 GVSEKCDIYSYGMVLLELTGG 307
K DI+S G++ +E+ G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEG 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEVA 148
++E+E + + + ++G G S V G L VA+K + E ++F SE +
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V G +V E+++NGSLD ++ R +G ++ L L
Sbjct: 103 IMGQFDHPNIIRLEG-VVTRGRLAMIVTEYMENGSLDTFL----RTHDGQFTIMQLVGML 157
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R V + YL + +H D+ N+L+D N VSDFGLS+++ D
Sbjct: 158 R-----GVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 269 TTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT G + APE I + S D++S+G+V+ E+
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 103 DNFQALLGHGSSASV-FKGILSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVR 160
DNF + G GS+ V + S G VAVK+++ + +E +EV + QH N+V
Sbjct: 23 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+ +V G ++V EF++ G+L I +R +E + CL+ V +AL
Sbjct: 82 MYNSYLV-GDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA----------VLQAL 129
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
S LH V+H D+K ++ILL + R +SDFG +S++ R + GT ++AP
Sbjct: 130 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAP 185
Query: 281 EWILEQGVSEKCDIYSYGMVLLELTGG 307
E I + DI+S G++++E+ G
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEVA 148
++E+E + + + ++G G S V G L VA+K + E ++F SE +
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V G +V E+++NGSLD ++ R +G ++ L L
Sbjct: 103 IMGQFDHPNIIRLEG-VVTRGRLAMIVTEYMENGSLDTFL----RTHDGQFTIMQLVGML 157
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R V + YL + +H D+ N+L+D N VSDFGLS+++ D
Sbjct: 158 R-----GVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 269 TTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT G + APE I + S D++S+G+V+ E+
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 103 DNFQALLGHGSSASV-FKGILSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVR 160
DNF + G GS+ V + S G VAVK+++ + +E +EV + QH N+V
Sbjct: 32 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+ +V G ++V EF++ G+L I +R +E + CL+ V +AL
Sbjct: 91 MYNSYLV-GDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA----------VLQAL 138
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
S LH V+H D+K ++ILL + R +SDFG +S++ R + GT ++AP
Sbjct: 139 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAP 194
Query: 281 EWILEQGVSEKCDIYSYGMVLLELTGG 307
E I + DI+S G++++E+ G
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 109 LGHGSSASVFKGI-LSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVRLLGYCV 166
+G G+S +V+ + ++ G VA++++N ++ +KE +E+ + ++ N+V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHND 226
V G ++V E++ GSL + T EG + C + +AL +LH++
Sbjct: 89 V-GDELWVVMEYLAGGSLTDVVTETCM-DEGQIAAVCR----------ECLQALEFLHSN 136
Query: 227 CRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQ 286
+V+H D+K +NILL + ++DFG ++ +QS+ + + GT ++APE + +
Sbjct: 137 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTRK 192
Query: 287 GVSEKCDIYSYGMVLLELTGG 307
K DI+S G++ +E+ G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEG 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 30/215 (13%)
Query: 108 LLGHGSSASVFKGILSDGTSVAVKR--INGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
+LG G K + V V + I +E ++ F EV + +H N+++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG-- 74
Query: 166 VVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLH 224
V+ R + E+I+ G+L I + + Y W R A D+A ++YLH
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGII----KSMDSQYP-----WSQRVSFAKDIASGMAYLH 125
Query: 225 NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-------------ITTI 271
+ ++H D+ N L+ EN VV+DFGL++LM ++++ T+
Sbjct: 126 S---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTG 306
G ++APE I + EK D++S+G+VL E+ G
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 109 LGHGSSASVFKGI-LSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVRLLGYCV 166
+G G+S +V+ + ++ G VA++++N ++ +KE +E+ + ++ N+V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHND 226
V G ++V E++ GSL + T EG + C + +AL +LH++
Sbjct: 88 V-GDELWVVMEYLAGGSLTDVVTETCM-DEGQIAAVCR----------ECLQALEFLHSN 135
Query: 227 CRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQ 286
+V+H D+K +NILL + ++DFG ++ +QS+ + + GT ++APE + +
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRK 191
Query: 287 GVSEKCDIYSYGMVLLELTGG 307
K DI+S G++ +E+ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 99 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 153
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGL++++ D
Sbjct: 154 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAY 205
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 206 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 103 DNFQALLGHGSSASV-FKGILSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVR 160
DNF + G GS+ V + S G VAVK+++ + +E +EV + QH N+V
Sbjct: 34 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+ +V G ++V EF++ G+L I +R +E + CL+ V +AL
Sbjct: 93 MYNSYLV-GDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA----------VLQAL 140
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
S LH V+H D+K ++ILL + R +SDFG +S++ R + GT ++AP
Sbjct: 141 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAP 196
Query: 281 EWILEQGVSEKCDIYSYGMVLLELTGG 307
E I + DI+S G++++E+ G
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 103 DNFQALLGHGSSASV-FKGILSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVR 160
DNF + G GS+ V + S G VAVK+++ + +E +EV + QH N+V
Sbjct: 27 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+ +V G ++V EF++ G+L I +R +E + CL+ V +AL
Sbjct: 86 MYNSYLV-GDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA----------VLQAL 133
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
S LH V+H D+K ++ILL + R +SDFG +S++ R + GT ++AP
Sbjct: 134 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAP 189
Query: 281 EWILEQGVSEKCDIYSYGMVLLELTGG 307
E I + DI+S G++++E+ G
Sbjct: 190 ELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 109 LGHGSSASVFKGI-LSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVRLLGYCV 166
+G G+S +V+ + ++ G VA++++N ++ +KE +E+ + ++ N+V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHND 226
V G ++V E++ GSL + T EG + C + +AL +LH++
Sbjct: 88 V-GDELWVVMEYLAGGSLTDVVTETCM-DEGQIAAVCR----------ECLQALEFLHSN 135
Query: 227 CRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQ 286
+V+H D+K +NILL + ++DFG ++ +QS+ + + GT ++APE + +
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SEMVGTPYWMAPEVVTRK 191
Query: 287 GVSEKCDIYSYGMVLLELTGG 307
K DI+S G++ +E+ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 104 NFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG 163
F +G G V G + VA+K I E++F E + H LV+L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C+ P LV+EF+++G L ++ R G ++ L + +DV + ++YL
Sbjct: 70 VCL-EQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL-----LGMCLDVCEGMAYL 119
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
+ V+H D+ N L+ EN VSDFG+++ + DQ T + + +PE
Sbjct: 120 EE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 284 LEQGVSEKCDIYSYGMVLLEL 304
S K D++S+G+++ E+
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEV 197
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E ++NGSLD ++ R+ + ++ L L
Sbjct: 99 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFL----RKHDAQFTVIQLVGML 153
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 154 R-----GIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 206 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 108 LLGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG--- 163
L+G G VFK DG + +KR+ + N EK R EV A+A HVN+V G
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRV--KYNNEKAER-EVKALAKLDHVNIVHYNGCWD 74
Query: 164 -YCVVPGGPR-----------YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYR 211
+ P ++ EF G+L+ WI RR E L L
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEK------LDKVLALE 126
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI 271
+ + K + Y+H+ ++++ D+KP NI L + + + DFGL + D R +
Sbjct: 127 LFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS-- 181
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+GT Y++PE I Q ++ D+Y+ G++L EL
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 79
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 127
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 128 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 187
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 80
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 128
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 129 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 188
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGR 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 87
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y++ E+++NGSL ++ SG L+ + +A +A+ ++++
Sbjct: 88 QEPIYIITEYMENGSLVDFL--------KTPSGIKLTINKLLDMAAQIAEGMAFIE---E 136
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 289 SEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 197 TIKSDVWSFGILLTEIVTHGR 217
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 84 EEPIYIVIEYMSKGSLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 132
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 193 TIKSDVWSFGILLTELT 209
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 76
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 77 EEPIYIVTEYMSKGSLLDFL----KGETGKY----LRLPQLVDMAAQIASGMAYVE---R 125
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 186 TIKSDVWSFGILLTELT 202
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 78
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 73
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 121
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 181
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGR 203
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 84
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 132
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 192
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGR 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 10 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E ++NGSLD ++ R+ + ++ L L
Sbjct: 70 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFL----RKHDAQFTVIQLVGML 124
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 125 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 177 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 78
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR 208
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 103 DNFQALLGHGSSASV-FKGILSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVR 160
DNF + G GS+ V + S G VAVK+++ + +E +EV + QH N+V
Sbjct: 77 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+ +V G ++V EF++ G+L I +R +E + CL+ V +AL
Sbjct: 136 MYNSYLV-GDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA----------VLQAL 183
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
S LH V+H D+K ++ILL + R +SDFG +S++ R + GT ++AP
Sbjct: 184 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAP 239
Query: 281 EWILEQGVSEKCDIYSYGMVLLELTGG 307
E I + DI+S G++++E+ G
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G + V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 78
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ + + + APE I
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT 186
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR 208
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 103 DNFQALLGHGSSASV-FKGILSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVR 160
DNF +G GS+ V + S G VAVK+++ + +E +EV + QH N+V
Sbjct: 154 DNF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+ +V G ++V EF++ G+L I +R +E + CL+ V +AL
Sbjct: 213 MYNSYLV-GDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA----------VLQAL 260
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
S LH V+H D+K ++ILL + R +SDFG +S++ R + GT ++AP
Sbjct: 261 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAP 316
Query: 281 EWILEQGVSEKCDIYSYGMVLLELTGG 307
E I + DI+S G++++E+ G
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 84
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 132
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 192
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGR 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 83
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 131
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 132 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 191
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGR 213
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E+++NGSLD ++ R+ + ++ L L
Sbjct: 99 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 153
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGL +++ D
Sbjct: 154 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 206 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 86
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 134
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 135 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGR 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 78
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 74
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 75 EEPIYIVTEYMSKGSLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 123
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 184 TIKSDVWSFGILLTELT 200
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + H S +A A+ + YLH
Sbjct: 78 TKP--QLAIVTQWCEGSSLYHHL---------HASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ + SR S + G+ ++APE I
Sbjct: 127 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 285 EQG---VSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEKMKEGKL 341
Q S + D+Y++G+VL EL G+ S I N++ + + E + G L
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI---NNRDQ---------IIEMVGRGSL 231
Query: 342 MEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARVVEMLE 389
D + +R+ + C++++ RPS R++ +E
Sbjct: 232 S-------PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 72
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 73 EEPIYIVTEYMSKGSLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 121
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 182 TIKSDVWSFGILLTELT 198
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGT----SVAVK--RINGEENGEKEFRSEVA 148
+KEL+ + ++G G V G L + SVA+K ++ E ++F E +
Sbjct: 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++RL G V P +V E ++NGSLD ++ R+ + ++ L L
Sbjct: 99 IMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFL----RKHDAQFTVIQLVGML 153
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 154 R-----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + +PE I + + D++SYG+VL E+
Sbjct: 206 TT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 84 EEPIYIVIEYMSKGSLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 132
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 193 TIKSDVWSFGILLTELT 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVVS 83
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 84 EEPIYIVTEYMSKGSLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 132
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 193 TIKSDVWSFGILLTELT 209
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 84 EEPIYIVTEYMSKGSLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 132
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 193 TIKSDVWSFGILLTELT 209
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + E +G L +A +A ++Y+ R
Sbjct: 250 EEPIYIVTEYMSKGSLLDFL-----KGE---TGKYLRLPQLVDMAAQIASGMAYVE---R 298
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 359 TIKSDVWSFGILLTELT 375
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 88
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 136
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H D++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 137 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 196
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGR 218
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 84 EEPIYIVCEYMSKGSLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 132
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 193 TIKSDVWSFGILLTELT 209
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + E +G L +A +A ++Y+ R
Sbjct: 250 EEPIYIVTEYMSKGSLLDFL-----KGE---TGKYLRLPQLVDMAAQIASGMAYVE---R 298
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 359 TIKSDVWSFGILLTELT 375
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 80
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID----VAKALSYLH 224
P Y+V E++ GSL ++ + G Y LR +D +A ++Y+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFL----KGETGKY--------LRLPQLVDMSAQIASGMAYVE 128
Query: 225 NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWIL 284
R +H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 129 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 185
Query: 285 EQGVSEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 186 YGRFTIKSDVWSFGILLTELT 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + H S +A A+ + YLH
Sbjct: 90 TAP--QLAIVTQWCEGSSLYHHL---------HASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ SR S + G+ ++APE I
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 285 EQG---VSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEKMKEGKL 341
Q S + D+Y++G+VL EL G+ S I N++ + + E + G L
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI---NNRDQ---------IIEMVGRGSL 243
Query: 342 MEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARVVEMLE 389
D + +R+ + C++++ RPS R++ +E
Sbjct: 244 S-------PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 80
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID----VAKALSYLH 224
P Y+V E++ GSL ++ + G Y LR +D +A ++Y+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFL----KGETGKY--------LRLPQLVDMSAQIASGMAYVE 128
Query: 225 NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWIL 284
R +H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 129 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAAL 185
Query: 285 EQGVSEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 186 YGRFTIKSDVWSFGILLTELT 206
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 46/304 (15%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILS----DGTSVAVK--RINGEENGEKEFRSEVA 148
+KE+E + + ++G G V G L VA+K ++ E ++F E +
Sbjct: 16 AKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEAS 75
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++ L G V P +V E+++NGSLD ++ ++++G ++ L L
Sbjct: 76 IMGQFDHPNIIHLEG-VVTKSKPVMIVTEYMENGSLDTFL----KKNDGQFTVIQLVGML 130
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R ++ + YL + +H D+ NIL++ N VSDFGLS+++ D
Sbjct: 131 R-----GISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 182
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKW 325
TT RG + + APE I + + D++SYG+V+ E ++ +G + W
Sbjct: 183 TT-RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWE---------VVSYG---ERPYW 229
Query: 326 QYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARVV 385
+ + V + ++EG RL + ++D C Q+ RP +V
Sbjct: 230 EMTNQDVIKAVEEG-------YRLPSPMDCPAALYQLMLD----CWQKERNSRPKFDEIV 278
Query: 386 EMLE 389
ML+
Sbjct: 279 NMLD 282
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 47/227 (20%)
Query: 108 LLGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC- 165
L+G G VFK DG + ++R+ + N EK R EV A+A HVN+V G C
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRV--KYNNEKAER-EVKALAKLDHVNIVHYNG-CW 74
Query: 166 ------------------VVPGGPR----------YLVYEFIQNGSLDHWIFPTSRRSEG 197
P + ++ EF G+L+ WI RR E
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEK 132
Query: 198 HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS 257
L L + + K + Y+H+ +++H D+KP NI L + + + DFGL
Sbjct: 133 ------LDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ D R T +GT Y++PE I Q ++ D+Y+ G++L EL
Sbjct: 184 TSLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDG----TSVAVKRING--EENGEKEFRSEVA 148
+KE++ + + ++G G V +G L + VA+K + G E +EF SE +
Sbjct: 8 AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEAS 67
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ +H N++RL G V P ++ EF++NG+LD ++ R ++G ++ L L
Sbjct: 68 IMGQFEHPNIIRLEG-VVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGML 122
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQS-RC 267
R +A + YL +H D+ NIL++ N VSDFGLS+ + + S
Sbjct: 123 R-----GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
Query: 268 ITTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
T+ G + + APE I + + D +SYG+V+ E+
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 214
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 84 EEPIYIVTEYMSKGSLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 132
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D+ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 193 TIKSDVWSFGILLTELT 209
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 250 EEPIYIVGEYMSKGSLLDFL----KGETGKY----LRLPQLVDMAAQIASGMAYVE---R 298
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 359 TIKSDVWSFGILLTELT 375
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 31/224 (13%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDG----TSVAVKRING--EENGEKEFRSEVA 148
+KE++ + + ++G G V +G L + VA+K + G E +EF SE +
Sbjct: 10 AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEAS 69
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ +H N++RL G V P ++ EF++NG+LD ++ R ++G ++ L L
Sbjct: 70 IMGQFEHPNIIRLEG-VVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGML 124
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R +A + YL +H D+ NIL++ N VSDFGLS+ + + S
Sbjct: 125 R-----GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 269 TT--------IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
T IR T APE I + + D +SYG+V+ E+
Sbjct: 177 ETSSLGGKIPIRWT----APEAIAFRKFTSASDAWSYGIVMWEV 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 332
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 333 EEPIYIVTEYMSKGSLLDFL----KGETGKY----LRLPQLVDMAAQIASGMAYVE---R 381
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 442 TIKSDVWSFGILLTELT 458
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 250
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 251 EEPIYIVTEYMSKGSLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 299
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL +L+ ++ + + APE L
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 360 TIKSDVWSFGILLTELT 376
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 105 FQALLGHGSSASVFKGILSDGTS-VAVKRINGE--ENGEKEFRSEVAAIASAQHVNLVRL 161
Q ++G G++A V + VA+KRIN E + E E+ A++ H N+V
Sbjct: 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 78
Query: 162 LGYCVVPGGPRYLVYEFIQNGS----LDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
VV +LV + + GS + H + ++G + G L + +V
Sbjct: 79 YTSFVV-KDELWLVMKLLSGGSVLDIIKHIV------AKGEHKSGVLDESTIATILREVL 131
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR----DQSRCITTIRG 273
+ L YLH + + +H DVK NILL E+ ++DFG+S ++ +++ T G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 274 TRGYLAPEWILEQ--GVSEKCDIYSYGMVLLELTGG 307
T ++APE ++EQ G K DI+S+G+ +EL G
Sbjct: 189 TPCWMAPE-VMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VAVK + F +E + QH LVRL Y VV
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVT 74
Query: 169 GGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E+++NGSL D P SG L+ + +A +A+ ++++
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTP---------SGIKLTINKLLDMAAQIAEGMAFIE--- 122
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
+H +++ NIL+ + ++DFGL++L+ ++ + + APE I
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 182
Query: 288 VSEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L E+ T GR
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGR 204
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + H S +A A+ + YLH
Sbjct: 90 TKP--QLAIVTQWCEGSSLYHHL---------HASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ SR S + G+ ++APE I
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 285 EQG---VSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEKMKEGKL 341
Q S + D+Y++G+VL EL G+ S I N++ + + E + G L
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI---NNRDQ---------IIEMVGRGSL 243
Query: 342 MEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARVVEMLE 389
D + +R+ + C++++ RPS R++ +E
Sbjct: 244 S-------PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ G L ++ + G Y L +A +A ++Y+ R
Sbjct: 84 EEPIYIVMEYMSKGCLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 132
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 193 TIKSDVWSFGILLTELT 209
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 105 FQALLGHGSSASVFKGILSDGT-SVAVKRINGE--ENGEKEFRSEVAAIASAQHVNLVRL 161
Q ++G G++A V + VA+KRIN E + E E+ A++ H N+V
Sbjct: 14 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 73
Query: 162 LGYCVVPGGPRYLVYEFIQNGS----LDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
VV +LV + + GS + H + ++G + G L + +V
Sbjct: 74 YTSFVV-KDELWLVMKLLSGGSVLDIIKHIV------AKGEHKSGVLDESTIATILREVL 126
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR----DQSRCITTIRG 273
+ L YLH + + +H DVK NILL E+ ++DFG+S ++ +++ T G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 274 TRGYLAPEWILEQ--GVSEKCDIYSYGMVLLELTGG 307
T ++APE ++EQ G K DI+S+G+ +EL G
Sbjct: 184 TPCWMAPE-VMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ G L ++ + G Y L +A +A ++Y+ R
Sbjct: 84 EEPIYIVTEYMSKGCLLDFL----KGEMGKY----LRLPQLVDMAAQIASGMAYVE---R 132
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 193 TIKSDVWSFGILLTELT 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 28/213 (13%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK---RINGEENGEK---EFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KGI + +G +V + +I E G K EF E +AS H +LVR
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ P LV + + +G L ++ + S L+W + +AK +
Sbjct: 82 LLGVCLSPT--IQLVTQLMPHGCLLEYV---HEHKDNIGSQLLLNW------CVQIAKGM 130
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
YL R++H D+ N+L+ ++DFGL++L+ D+ G + +
Sbjct: 131 MYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--YNADGGKMPIKW 185
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELT--GGR 308
+A E I + + + D++SYG+ + EL GG+
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGK 218
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 73
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P +V E++ GSL ++ + G Y L +A +A ++Y+ R
Sbjct: 74 EEPIXIVTEYMSKGSLLDFL----KGETGKY----LRLPQLVDMAAQIASGMAYVE---R 122
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ EN V+DFGL++L+ ++ + + APE L
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 182
Query: 289 SEKCDIYSYGMVLLELT 305
+ K D++S+G++L ELT
Sbjct: 183 TIKSDVWSFGILLTELT 199
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILS----DGTSVAVKRING--EENGEKEFRSEVA 148
+KE++ + + ++G G V G L VA+K + + ++F SE +
Sbjct: 23 AKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEAS 82
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++ L G V P ++ E+++NGSLD ++ R+++G ++ L L
Sbjct: 83 IMGQFDHPNIIHLEG-VVTKCKPVMIITEYMENGSLDAFL----RKNDGRFTVIQLVGML 137
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R + + YL + +H D+ NIL++ N VSDFG+S+++ D
Sbjct: 138 R-----GIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 189
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + APE I + + D++SYG+V+ E+
Sbjct: 190 TT-RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 227
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 74 TAPQ--LAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ + SR S + G+ ++APE I
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 285 EQ---GVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGTS----VAVKRING--EENGEKEFRSEVA 148
+KE++ + + ++G G V G L VA+K + E ++F SE +
Sbjct: 27 AKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEAS 86
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++ L G V P ++ EF++NGSLD ++ R+++G ++ L L
Sbjct: 87 IMGQFDHPNVIHLEG-VVTKSTPVMIITEFMENGSLDSFL----RQNDGQFTVIQLVGML 141
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQS-RC 267
R +A + YL + +H D+ NIL++ N VSDFGLS+ + D S
Sbjct: 142 R-----GIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 268 ITTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
T+ G + + APE I + + D++SYG+V+ E+
Sbjct: 194 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 233
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 28/213 (13%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK---RINGEENGEK---EFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KGI + +G +V + +I E G K EF E +AS H +LVR
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ P LV + + +G L ++ + S L+W + +AK +
Sbjct: 105 LLGVCLSPT--IQLVTQLMPHGCLLEYV---HEHKDNIGSQLLLNW------CVQIAKGM 153
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
YL R++H D+ N+L+ ++DFGL++L+ D+ G + +
Sbjct: 154 MYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--YNADGGKMPIKW 208
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELT--GGR 308
+A E I + + + D++SYG+ + EL GG+
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGK 241
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 ELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEFRSEVAAI 150
+ EE F LG G+ SV L D T VAVK++ + E ++F E+ +
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 151 ASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
S QH N+V+ G C G L+ EF+ GSL ++ +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-------------------QK 109
Query: 210 YRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR 262
++ ID K L Y C+ R +H D+ NIL++ R + DFGL+K++ +
Sbjct: 110 HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
Query: 263 DQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
D+ G + APE + E S D++S+G+VL EL
Sbjct: 170 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 19/225 (8%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGILSDGTSVAV-KRINGEENGEKEFRSEVAAIASAQH 155
E+E + +G GS +V+KG +V + K ++ + FR+EVA + +H
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 91
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
VN++ +GY + W +S H +A
Sbjct: 92 VNILLFMGYMTKDNL-----------AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ 140
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGT 274
A+ + YLH ++H D+K NI L E + DFGL+ + SR S+ + G+
Sbjct: 141 TAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS 197
Query: 275 RGYLAPEWILEQ---GVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
++APE I Q S + D+YSYG+VL EL G S I +
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILS----DGTSVAVKRING--EENGEKEFRSEVA 148
+KE++ + + ++G G V G L VA+K + + ++F SE +
Sbjct: 8 AKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEAS 67
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++ L G V P ++ E+++NGSLD ++ R+++G ++ L L
Sbjct: 68 IMGQFDHPNIIHLEG-VVTKCKPVMIITEYMENGSLDAFL----RKNDGRFTVIQLVGML 122
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R + + YL + +H D+ NIL++ N VSDFG+S+++ D
Sbjct: 123 R-----GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 174
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + APE I + + D++SYG+V+ E+
Sbjct: 175 TT-RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 212
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 108 LLGHGSSASVFKGILS--DGTS--VAVKRI---NGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G SV +G L DGTS VAVK + N + +EF SE A + H N++R
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 161 LLGYCV---VPGGPRYLV-YEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
LLG C+ G P+ +V F++ G L ++ SR G + + +D+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL-YSRLETGPKH---IPLQTLLKFMVDI 156
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-KLMSRDQSRCITTIRGTR 275
A + YL N LH D+ N +L ++ V+DFGLS K+ S D R +
Sbjct: 157 ALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 213
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLELT 305
++A E + ++ + K D++++G+ + E+
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIA 243
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG+G V+ G + T VA+K + + F E + +H LV+L Y VV
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVS 74
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E++ GSL ++ + EG L +A VA ++Y+ R
Sbjct: 75 EEPIYIVTEYMNKGSLLDFL----KDGEGR----ALKLPNLVDMAAQVAAGMAYIE---R 123
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ ++DFGL++L+ ++ + + APE L
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 289 SEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L EL T GR
Sbjct: 184 TIKSDVWSFGILLTELVTKGR 204
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILS----DGTSVAVKRING--EENGEKEFRSEVA 148
+KE++ + + ++G G V G L VA+K + + ++F SE +
Sbjct: 2 AKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEAS 61
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++ L G V P ++ E+++NGSLD ++ R+++G ++ L L
Sbjct: 62 IMGQFDHPNIIHLEG-VVTKCKPVMIITEYMENGSLDAFL----RKNDGRFTVIQLVGML 116
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
R + + YL + +H D+ NIL++ N VSDFG+S+++ D
Sbjct: 117 R-----GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 168
Query: 269 TTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
TT RG + + APE I + + D++SYG+V+ E+
Sbjct: 169 TT-RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 74 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ + SR S + G+ ++APE I
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 285 EQ---GVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 101 TKP--QLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 149
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ + SR S + G+ ++APE I
Sbjct: 150 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 285 EQG---VSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 241
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 102 TKP--QLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 150
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ + SR S + G+ ++APE I
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 285 EQG---VSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 79 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 127
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ + SR S + G+ ++APE I
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 285 EQ---GVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 17/184 (9%)
Query: 125 GTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGS 183
G VAVK+++ + +E +EV + H N+V + +V G ++V EF++ G+
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLV-GDELWVVMEFLEGGA 128
Query: 184 LDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL 243
L I +R +E + CLS V +ALSYLHN V+H D+K ++ILL
Sbjct: 129 LTD-IVTHTRMNEEQIATVCLS----------VLRALSYLHNQG---VIHRDIKSDSILL 174
Query: 244 DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ R +SDFG +S++ + + GT ++APE I + DI+S G++++E
Sbjct: 175 TSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 233
Query: 304 LTGG 307
+ G
Sbjct: 234 MIDG 237
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 79 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 127
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ + SR S + G+ ++APE I
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 285 EQ---GVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 76 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 124
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ + SR S + G+ ++APE I
Sbjct: 125 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 285 EQ---GVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 216
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 109 LGHGSSASVFKGILSD------GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V++G D T VAVK +N + + EF +E + + ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVAIDVAK 218
LLG V G P +V E + +G L ++ S R E + G L+ ++A ++A
Sbjct: 82 LLG-VVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
++YL+ + +H D+ N ++ ++ + DFG M+RD +G +G L
Sbjct: 139 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLL 191
Query: 279 APEWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN 333
W+ L+ GV + D++S+G+VL E+T SL E Q + + N
Sbjct: 192 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT------SLAE----------QPYQGLSN 235
Query: 334 EKMKEGKLMEIVDQRLTDEGGIDETQ--VRRLVDVAFWCIQERARLRPSMARVVEMLE 389
E+ V + + D G +D+ R+ D+ C Q ++RP+ +V +L+
Sbjct: 236 EQ---------VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 109 LGHGSSASVFKGILSD------GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V++G D T VAVK +N + + EF +E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVAIDVAK 218
LLG V G P +V E + +G L ++ S R E + G L+ ++A ++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
++YL+ + +H D+ N ++ ++ + DFG M+RD +G +G L
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLL 194
Query: 279 APEWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN 333
W+ L+ GV + D++S+G+VL E+T SL E Q + + N
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT------SLAE----------QPYQGLSN 238
Query: 334 EKMKEGKLMEIVDQRLTDEGGIDETQ--VRRLVDVAFWCIQERARLRPSMARVVEMLE 389
E+ V + + D G +D+ R+ D+ C Q ++RP+ +V +L+
Sbjct: 239 EQ---------VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 ELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEFRSEVAAI 150
+ EE F LG G+ SV L D T VAVK++ + E ++F E+ +
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 69
Query: 151 ASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
S QH N+V+ G C G L+ E++ GSL ++ +
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------------QK 110
Query: 210 YRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR 262
++ ID K L Y C+ R +H D+ NIL++ R + DFGL+K++ +
Sbjct: 111 HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 170
Query: 263 DQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
D+ G + APE + E S D++S+G+VL EL
Sbjct: 171 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------- 107
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
+++ ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 108 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------- 104
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
+++ ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 105 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 2 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 56
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++
Sbjct: 57 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------- 102
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
+++ ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 103 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 157
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 3 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 57
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------- 103
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
+++ ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 104 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 158
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 10 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 64
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++
Sbjct: 65 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------- 110
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
+++ ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 111 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 165
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 35 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 89
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------- 135
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
+++ ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 136 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 190
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 9 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 63
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------- 109
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
+++ ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 110 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 164
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------- 104
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
+++ ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 105 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++ + R
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-------- 113
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 114 -----------IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 ELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEFRSEVAAI 150
+ EE F LG G+ SV L D T VAVK++ + E ++F E+ +
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 151 ASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
S QH N+V+ G C G L+ E++ GSL ++ +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------------QK 124
Query: 210 YRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR 262
++ ID K L Y C+ R +H D+ NIL++ R + DFGL+K++ +
Sbjct: 125 HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 263 DQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
D+ G + APE + E S D++S+G+VL EL
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEF 143
P +F + L+ F LG G+ SV L D T VAVK++ + E ++F
Sbjct: 11 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 65
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
E+ + S QH N+V+ G C G L+ E++ GSL ++
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------- 111
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFG 255
+++ ID K L Y C+ R +H D+ NIL++ R + DFG
Sbjct: 112 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 166
Query: 256 LSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
L+K++ +D+ G + APE + E S D++S+G+VL EL
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 142
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLP 199
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 23/220 (10%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGTS----VAVKRING--EENGEKEFRSEVA 148
SKE++ + + ++G G V G L VA+K + E ++F SE +
Sbjct: 1 SKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEAS 60
Query: 149 AIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDL 208
+ H N++ L G V P ++ EF++NGSLD ++ R+++G ++ L L
Sbjct: 61 IMGQFDHPNVIHLEG-VVTKSTPVMIITEFMENGSLDSFL----RQNDGQFTVIQLVGML 115
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQS-RC 267
R +A + YL + +H + NIL++ N VSDFGLS+ + D S
Sbjct: 116 R-----GIAAGMKYLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 167
Query: 268 ITTIRGTR---GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
T+ G + + APE I + + D++SYG+V+ E+
Sbjct: 168 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 109 LGHGSSASVFKGILSD------GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V++G D T VAVK +N + + EF +E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVAIDVAK 218
LLG V G P +V E + +G L ++ S R E + G L+ ++A ++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
++YL+ + +H D+ N ++ ++ + DFG M+RD +G +G L
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETAYYRKGGKGLL 194
Query: 279 APEWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN 333
W+ L+ GV + D++S+G+VL E+T SL E Q + + N
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT------SLAE----------QPYQGLSN 238
Query: 334 EKMKEGKLMEIVDQRLTDEGGIDETQ--VRRLVDVAFWCIQERARLRPSMARVVEMLE 389
E+ V + + D G +D+ R+ D+ C Q ++RP+ +V +L+
Sbjct: 239 EQ---------VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L +C Y + +NG L +I R G + C R+ A ++
Sbjct: 100 VKLY-FCFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 148
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGY 277
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + + GT Y
Sbjct: 149 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++PE + E+ + D+++ G ++ +L G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 ELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEFRSEVAAI 150
+ EE F LG G+ SV L D T VAVK++ + E ++F E+ +
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 151 ASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
S QH N+V+ G C G L+ E++ GSL ++ +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------------QK 124
Query: 210 YRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR 262
++ ID K L Y C+ R +H D+ NIL++ R + DFGL+K++ +
Sbjct: 125 HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 263 DQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
D+ G + APE + E S D++S+G+VL EL
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 74 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ SR S + G+ ++APE I
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 285 EQ---GVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 52/298 (17%)
Query: 109 LGHGSSASVFKGILSD------GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V++G D T VAVK +N + + EF +E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVAIDVAK 218
LLG V G P +V E + +G L ++ S R E + G L+ ++A ++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
++YL+ + +H D+ N ++ ++ + DFG M+RD +G +G L
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLL 194
Query: 279 APEWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN 333
W+ L+ GV + D++S+G+VL E+T SL E Q + + N
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT------SLAE----------QPYQGLSN 238
Query: 334 EKMKEGKLMEIVDQRLTDEGGIDETQ--VRRLVDVAFWCIQERARLRPSMARVVEMLE 389
E+ V + + D G +D+ R+ D+ C Q +RP+ +V +L+
Sbjct: 239 EQ---------VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 97 ELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRINGEENGEKEF---RSEVAAIAS 152
E++ A + ++G G V++ + D +V R + +E+ + R E A
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 153 AQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYR 211
+H N++ L G C+ P LV EF + G L+ + SG + D+
Sbjct: 63 LKHPNIIALRGVCL--KEPNLCLVMEFARGGPLNRVL-----------SGKRIPPDILVN 109
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDE--------NYRAVVSDFGLSKLMSRD 263
A+ +A+ ++YLH++ ++H D+K NIL+ + N ++DFGL++ R
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169
Query: 264 QSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ G ++APE I S+ D++SYG++L EL G
Sbjct: 170 TK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 102 TKP--QLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 150
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ SR S + G+ ++APE I
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 285 EQG---VSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGYC 165
+G GS +V+KG VAVK +N ++ F++EV + +HVN++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P +V ++ + SL H + + E +A A+ + YLH
Sbjct: 94 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGMDYLHA 142
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWIL 284
++H D+K NI L E+ + DFGL+ SR S + G+ ++APE I
Sbjct: 143 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 285 EQ---GVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
Q S + D+Y++G+VL EL G+ S I +
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 234
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 ELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEFRSEVAAI 150
+ EE F LG G+ SV L D T VAVK++ + E ++F E+ +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 151 ASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
S QH N+V+ G C G L+ E++ GSL ++ +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------------QK 106
Query: 210 YRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR 262
++ ID K L Y C+ R +H D+ NIL++ R + DFGL+K++ +
Sbjct: 107 HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 263 DQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
D+ G + APE + E S D++S+G+VL EL
Sbjct: 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 143
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 19/174 (10%)
Query: 150 IASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
+A H +V+L Y G YL+ +F++ G L T E ++ D++
Sbjct: 84 LADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFT----EEDVK 133
Query: 210 YRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT 269
+ +A ++A L +LH+ +++ D+KPENILLDE ++DFGLSK + D +
Sbjct: 134 FYLA-ELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAY 188
Query: 270 TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKN 323
+ GT Y+APE + QG S D +SYG+++ E+ G SL G D+ +
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG----SLPFQGKDRKET 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 140
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 141 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 197
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 198 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 109 LGHGSSASVFKGILSD------GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V++G D T VAVK +N + + EF +E + + ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVAIDVAK 218
LLG V G P +V E + +G L ++ S R E + G L+ ++A ++A
Sbjct: 84 LLG-VVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
++YL+ + +H D+ N ++ ++ + DFG M+RD +G +G L
Sbjct: 141 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLL 193
Query: 279 APEWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN 333
W+ L+ GV + D++S+G+VL E+T SL E Q + + N
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT------SLAE----------QPYQGLSN 237
Query: 334 EKMKEGKLMEIVDQRLTDEGGIDETQ--VRRLVDVAFWCIQERARLRPSMARVVEMLE 389
E+ V + + D G +D+ R+ D+ C Q ++RP+ +V +L+
Sbjct: 238 EQ---------VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 142
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 199
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 143
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 161
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 162 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 218
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 219 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 248
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 141
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 142 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 198
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 135
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 136 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 192
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 193 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 222
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 138
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 139 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 196 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 225
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 109 LGHGSSASVFKGILSD------GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V++G D T VAVK +N + + EF +E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVAIDVAK 218
LLG V G P +V E + +G L ++ S R E + G L+ ++A ++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
++YL+ + +H D+ N ++ ++ + DFG M+RD +G +G L
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLL 194
Query: 279 APEWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN 333
W+ L+ GV + D++S+G+VL E+T SL E Q + + N
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT------SLAE----------QPYQGLSN 238
Query: 334 EKMKEGKLMEIVDQRLTDEGGIDETQ--VRRLVDVAFWCIQERARLRPSMARVVEMLE 389
E+ V + + D G +D+ R+ D+ C Q ++RP+ +V +L+
Sbjct: 239 EQ---------VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 162
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + YL + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 163 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 219
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 220 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 249
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y + +NG L +I R G + C R+ A ++ AL YLH ++
Sbjct: 108 YFGLSYAKNGCLLKYI-----RKIGSFDETCT----RFYTA-EIVSALEYLHGKG---II 154
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGYLAPEWILEQGVSEK 291
H D+KPENILL+E+ ++DFG +K++S + + + GT Y++PE + E+ S+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKS 214
Query: 292 CDIYSYGMVLLELTGG 307
D+++ G ++ +L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 137 ENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE 196
E +E +E++ + S H N+++L YLV EF + G L I + E
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFD-VFEDKKYFYLVTEFYEGGELFEQIINRHKFDE 145
Query: 197 GHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVS---- 252
C + ++ ++ + YLH + ++H D+KPENILL EN ++++
Sbjct: 146 ------CDAANIMKQIL----SGICYLH---KHNIVHRDIKPENILL-ENKNSLLNIKIV 191
Query: 253 DFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
DFGLS S+D + GT Y+APE +L++ +EKCD++S G+++ L G
Sbjct: 192 DFGLSSFFSKDYK--LRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 104 NFQALLGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQ 154
N LG G+ V + GI T +VAVK + G + E + SE+ I
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWI------FPTSRRSEGHYSGGCLSWDL 208
H+N+V LLG C PGGP ++ EF + G+L ++ F + E Y L+ +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYK-DFLTLEH 149
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 269 T-TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 19/215 (8%)
Query: 104 NFQALLGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQ 154
N LG G+ V + GI T +VAVK + G + E + SE+ I
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE----GHYSGGCLSWDLRY 210
H+N+V LLG C PGGP ++ EF + G+L ++ S+R+E L+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT- 269
+ VAK + +L + +H D+ NILL E + DFGL++ + +D
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKG 204
Query: 270 TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 ELEEATDNFQALLGHGSSASVFK---GILSDGTS--VAVKRI-NGEENGEKEFRSEVAAI 150
+ EE F LG G+ SV L D T VAVK++ + E ++F E+ +
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 66
Query: 151 ASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
S QH N+V+ G C G L+ E++ GSL ++ +
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------------------QK 107
Query: 210 YRVAIDVAKALSYLHNDCR-------SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR 262
++ ID K L Y C+ R +H ++ NIL++ R + DFGL+K++ +
Sbjct: 108 HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ 167
Query: 263 DQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
D+ G + APE + E S D++S+G+VL EL
Sbjct: 168 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 141
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + +L + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 142 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 143
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + +L + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 143
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + +L + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S +V L+ A+K + +EN E ++ H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 141
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGY 277
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + + GT Y
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++PE + E+ + D+++ G ++ +L G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 144
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + +L + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 148
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + +L + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 149 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 206 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 235
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 144
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + +L + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 18/122 (14%)
Query: 201 GGCLSWDLRYRVAI----------DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV 250
GG L + L+ V ++ AL YL N R++H D+KP+NILLDE+
Sbjct: 99 GGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVH 155
Query: 251 VSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQ---GVSEKCDIYSYGMVLLELTGG 307
++DF ++ ++ R+ ITT+ GT+ Y+APE + G S D +S G+ EL G
Sbjct: 156 ITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
Query: 308 RR 309
RR
Sbjct: 214 RR 215
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 104 NFQALLGHGSSASVFKGIL--SDGTSV--AVKRING-EENGE-KEFRSEVAAIASAQHVN 157
+F ++G G V+ G L +DG + AVK +N + GE +F +E + H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
++ LLG C+ G +V ++++G L ++I R+E H DL + VA
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-----RNETH---NPTVKDL-IGFGLQVA 202
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-- 275
K + +L + +H D+ N +LDE + V+DFGL++ M + + G +
Sbjct: 203 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 276 -GYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++A E + Q + K D++S+G++L EL
Sbjct: 260 VKWMALESLQTQKFTTKSDVWSFGVLLWEL 289
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 90 PIKFRSKELEEATDNFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFR 144
P + R K E+ F +LG GS S V L+ A+K + +EN
Sbjct: 1 PPQPRKKRPEDF--KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 58
Query: 145 SEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
E ++ H V+L + Y + +NG L +I R G + C
Sbjct: 59 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT 112
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD- 263
R+ A ++ AL YLH ++H D+KPENILL+E+ ++DFG +K++S +
Sbjct: 113 ----RFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
Query: 264 -QSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Q+R + GT Y++PE + E+ + D+++ G ++ +L G
Sbjct: 165 KQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + SR E
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT 114
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL N ++DFG S
Sbjct: 115 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS-- 159
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ SR TT+ GT YL PE I + EK D++S G++ E G
Sbjct: 160 VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQ 154
S E++ F LG G V G VA+K I E EF E + +
Sbjct: 3 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS 62
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H LV+L G C P +++ E++ NG L +++ R + +
Sbjct: 63 HEKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ---------LLEMCK 112
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
DV +A+ YL + + LH D+ N L+++ VSDFGLS+ + D+ T+ RG+
Sbjct: 113 DVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGS 166
Query: 275 RG---YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + PE ++ S K DI+++G+++ E+
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 125 GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQN 181
G VAVK + E G + + E+ + + H N+V+ G C GG L+ EF+ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 182 GSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENI 241
GSL ++ P ++ L L+Y A+ + K + YL + + +H D+ N+
Sbjct: 110 GSLKEYL-PKNKNKIN------LKQQLKY--AVQICKGMDYLGS---RQYVHRDLAARNV 157
Query: 242 LLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG----YLAPEWILEQGVSEKCDIYSY 297
L++ ++ + DFGL+K + D+ T++ R + APE +++ D++S+
Sbjct: 158 LVESEHQVKIGDFGLTKAIETDKEX--XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 215
Query: 298 GMVLLEL 304
G+ L EL
Sbjct: 216 GVTLHEL 222
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 108 LLGHGSSASVFKG-ILSDGTSVAVKRINGEENGEKEFRSEVAAIAS-AQHVNLVRLLGYC 165
L+G+G+ V+KG + G A+K ++ + E+E + E+ + + H N+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 166 VVPGGPR-----YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+ P +LV EF GS+ I T G L + + ++ + L
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--------GNTLKEEWIAYICREILRGL 142
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
S+LH + +V+H D+K +N+LL EN + DFG+S + R R T I GT ++AP
Sbjct: 143 SHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAP 198
Query: 281 EWIL-----EQGVSEKCDIYSYGMVLLELTGG 307
E I + K D++S G+ +E+ G
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 70 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 118
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD--QSRCITTIRGTRG 276
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + Q+R + GT
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 174
Query: 277 YLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y++PE + E+ + D+++ G ++ +L G
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 123 SDGTSVAVKRINGEENGEKEFR---SEVAAIASAQHVNLVRLLGYCV-VPGGPRYLVYEF 178
SDG + K ++ E E + SEV + +H N+VR + Y+V E+
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 179 IQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLH--NDCRSRVLHLDV 236
+ G L I T E Y L + RV + AL H +D VLH D+
Sbjct: 89 CEGGDLASVI--TKGTKERQY----LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 237 KPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYS 296
KP N+ LD + DFGL+++++ D S T + GT Y++PE + +EK DI+S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 297 YGMVLLEL 304
G +L EL
Sbjct: 202 LGCLLYEL 209
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 71 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 119
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD--QSRCITTIRGTRG 276
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + Q+R + GT
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 175
Query: 277 YLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y++PE + E+ + D+++ G ++ +L G
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G ++ T VAVK + + F E + + QH LVRL V
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA-VVTK 78
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y++ EF+ GSL ++ +S+ GG + + +A+ ++Y+ R
Sbjct: 79 EEPIYIITEFMAKGSLLDFL-----KSD---EGGKVLLPKLIDFSAQIAEGMAYIE---R 127
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ N+L+ E+ ++DFGL++++ ++ + + APE I
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 187
Query: 289 SEKCDIYSYGMVLLEL 304
+ K +++S+G++L E+
Sbjct: 188 TIKSNVWSFGILLYEI 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 92 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 140
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGY 277
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + + + GT Y
Sbjct: 141 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++PE + E+ + D+++ G ++ +L G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 105 FQALLGHGS-SASVFKGILSDGTSVAVKRINGE--ENGEKEFRSEVAAIASAQHVNLVRL 161
F+ LG G+ S V + G AVK I + + E +E+A + +H N+V L
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 162 LGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
P YLV + + G L I +G Y+ S +R V A+
Sbjct: 86 EDIYESPNH-LYLVMQLVSGGELFDRIV-----EKGFYTEKDASTLIR-----QVLDAVY 134
Query: 222 YLHNDCRSRVLHLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
YLH R ++H D+KPEN+L DE + ++SDFGLSK+ + ++T GT GY+
Sbjct: 135 YLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYV 189
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE + ++ S+ D +S G++ L G
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 150 IASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
+ H +V+L Y G YL+ +F++ G L T E ++ D++
Sbjct: 80 LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFT----EEDVK 129
Query: 210 YRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT 269
+ +A ++A AL +LH+ +++ D+KPENILLDE ++DFGLSK S D +
Sbjct: 130 FYLA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAY 184
Query: 270 TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ GT Y+APE + +G ++ D +S+G+++ E+ G
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 125 GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQN 181
G VAVK + E G + + E+ + + H N+V+ G C GG L+ EF+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 182 GSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENI 241
GSL ++ P ++ L L+Y A+ + K + YL + + +H D+ N+
Sbjct: 98 GSLKEYL-PKNKNKIN------LKQQLKY--AVQICKGMDYLGS---RQYVHRDLAARNV 145
Query: 242 LLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG----YLAPEWILEQGVSEKCDIYSY 297
L++ ++ + DFGL+K + D+ T++ R + APE +++ D++S+
Sbjct: 146 LVESEHQVKIGDFGLTKAIETDKEX--XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 203
Query: 298 GMVLLEL 304
G+ L EL
Sbjct: 204 GVTLHEL 210
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 104 NFQALLGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQ 154
N LG G+ V + GI T +VAVK + G + E + SE+ I
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE----GHYSGGCLSWDLRY 210
H+N+V LLG C PGGP ++ EF + G+L ++ S+R+E L+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT- 269
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 148 CYSFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 270 TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 14/136 (10%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y + +NG L +I R G + C R+ A ++ AL YLH ++
Sbjct: 109 YFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVSALEYLHG---KGII 155
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGYLAPEWILEQGVSEK 291
H D+KPENILL+E+ ++DFG +K++S + + + GT Y++PE + E+ +
Sbjct: 156 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS 215
Query: 292 CDIYSYGMVLLELTGG 307
D+++ G ++ +L G
Sbjct: 216 SDLWALGCIIYQLVAG 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 72 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 120
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD--QSRCITTIRGTRG 276
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + Q+R + GT
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 176
Query: 277 YLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y++PE + E+ + D+++ G ++ +L G
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE------GHYSGGCLSWDLRYRVA 213
LLG C PGGP ++ EF + G+L ++ S+R+E L+ + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TIR 272
VAK + +L + +H D+ NILL E + DFGL++ + +D R
Sbjct: 155 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++APE I ++ + + D++S+G++L E+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 19/174 (10%)
Query: 150 IASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
+ H +V+L Y G YL+ +F++ G L T E ++ D++
Sbjct: 80 LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFT----EEDVK 129
Query: 210 YRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT 269
+ +A ++A AL +LH+ +++ D+KPENILLDE ++DFGLSK S D +
Sbjct: 130 FYLA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAY 184
Query: 270 TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKN 323
+ GT Y+APE + +G ++ D +S+G+++ E+ G +L G D+ +
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG----TLPFQGKDRKET 234
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 150 IASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
+ H +V+L Y G YL+ +F++ G L T E ++ D++
Sbjct: 81 LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFT----EEDVK 130
Query: 210 YRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT 269
+ +A ++A AL +LH+ +++ D+KPENILLDE ++DFGLSK S D +
Sbjct: 131 FYLA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAY 185
Query: 270 TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ GT Y+APE + +G ++ D +S+G+++ E+ G
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ G ++ T VAVK + + F E + + QH LVRL Y VV
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRL--YAVVT 78
Query: 169 -GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
P Y++ E++ GSL ++ +S+ GG + + +A+ ++Y+
Sbjct: 79 REEPIYIITEYMAKGSLLDFL-----KSD---EGGKVLLPKLIDFSAQIAEGMAYIE--- 127
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQG 287
R +H D++ N+L+ E+ ++DFGL++++ ++ + + APE I
Sbjct: 128 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 288 VSEKCDIYSYGMVLLEL 304
+ K D++S+G++L E+
Sbjct: 188 FTIKSDVWSFGILLYEI 204
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 109 LGHGSSASVFK----GILS--DGTSVAVKRINGEENG--EKEFRSEVAAIASAQHVNLVR 160
+G G+ VF+ G+L T VAVK + E + + +F+ E A +A + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C V G P L++E++ G L+ ++ S + S LS R RV+ L
Sbjct: 115 LLGVCAV-GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS--TRARVSSPGPPPL 171
Query: 221 SYLHNDCRSR-------------VLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSR 266
S C +R +H D+ N L+ EN ++DFGLS+ + S D +
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 267 CITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE I + + D+++YG+VL E+
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 52/298 (17%)
Query: 109 LGHGSSASVFKGILSD------GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V++G D T VAVK +N + + EF +E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVAIDVAK 218
LLG V G P +V E + +G L ++ S R E + G L+ ++A ++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
++YL+ + +H ++ N ++ ++ + DFG M+RD +G +G L
Sbjct: 142 GMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLL 194
Query: 279 APEWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN 333
W+ L+ GV + D++S+G+VL E+T SL E Q + + N
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT------SLAE----------QPYQGLSN 238
Query: 334 EKMKEGKLMEIVDQRLTDEGGIDETQ--VRRLVDVAFWCIQERARLRPSMARVVEMLE 389
E+ V + + D G +D+ R+ D+ C Q +RP+ +V +L+
Sbjct: 239 EQ---------VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 52/298 (17%)
Query: 109 LGHGSSASVFKGILSD------GTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V++G D T VAVK +N + + EF +E + + ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVAIDVAK 218
LLG V G P +V E + +G L ++ S R E + G L+ ++A ++A
Sbjct: 86 LLG-VVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
++YL+ + +H ++ N ++ ++ + DFG M+RD +G +G L
Sbjct: 143 GMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLL 195
Query: 279 APEWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN 333
W+ L+ GV + D++S+G+VL E+T SL E Q + + N
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT------SLAE----------QPYQGLSN 239
Query: 334 EKMKEGKLMEIVDQRLTDEGGIDETQ--VRRLVDVAFWCIQERARLRPSMARVVEMLE 389
E+ V + + D G +D+ R+ D+ C Q +RP+ +V +L+
Sbjct: 240 EQ---------VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y + +NG L +I R G + C R+ A ++ AL YLH ++
Sbjct: 108 YFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVSALEYLHGKG---II 154
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGYLAPEWILEQGVSEK 291
H D+KPENILL+E+ ++DFG +K++S + + GT Y++PE + E+ +
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKS 214
Query: 292 CDIYSYGMVLLELTGG 307
D+++ G ++ +L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 77 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 125
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD--QSRCITTIRGTRG 276
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + Q+R GT
Sbjct: 126 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQ 181
Query: 277 YLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y++PE + E+ + D+++ G ++ +L G
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK---RINGEENGEKEFRS---EVAAIASAQHVNLVR 160
+LG G +V KG+ + +G S+ + ++ +++G + F++ + AI S H ++VR
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKA 219
LLG C PG LV +++ GSL DH R+ G L L + +AK
Sbjct: 80 LLGLC--PGSSLQLVTQYLPLGSLLDH-----VRQHRG-----ALGPQLLLNWGVQIAKG 127
Query: 220 LSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-GYL 278
+ YL ++H ++ N+LL + V+DFG++ L+ D + + + T ++
Sbjct: 128 MYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
A E I + + D++SYG+ + EL
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWEL 210
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK---RINGEENGEKEFRS---EVAAIASAQHVNLVR 160
+LG G +V KG+ + +G S+ + ++ +++G + F++ + AI S H ++VR
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKA 219
LLG C PG LV +++ GSL DH R+ G L L + +AK
Sbjct: 98 LLGLC--PGSSLQLVTQYLPLGSLLDH-----VRQHRG-----ALGPQLLLNWGVQIAKG 145
Query: 220 LSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR-GYL 278
+ YL ++H ++ N+LL + V+DFG++ L+ D + + + T ++
Sbjct: 146 MYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
A E I + + D++SYG+ + EL
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWEL 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y + +NG L +I R G + C R+ A ++ AL YLH ++
Sbjct: 106 YFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVSALEYLHG---KGII 152
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGYLAPEWILEQGVSEK 291
H D+KPENILL+E+ ++DFG +K++S + + GT Y++PE + E+ +
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKS 212
Query: 292 CDIYSYGMVLLELTGG 307
D+++ G ++ +L G
Sbjct: 213 SDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 141
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGY 277
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + + GT Y
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++PE + E+ + D+++ G ++ +L G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 141
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGY 277
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + + GT Y
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++PE + E+ + D+++ G ++ +L G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y + +NG L +I R G + C R+ A ++ AL YLH ++
Sbjct: 108 YFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVSALEYLHG---KGII 154
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGYLAPEWILEQGVSEK 291
H D+KPENILL+E+ ++DFG +K++S + + GT Y++PE + E+ +
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 292 CDIYSYGMVLLELTGG 307
D+++ G ++ +L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------FPTSRRSEGHYSGGCLSWDLRYRV 212
LLG C PGGP ++ EF + G+L ++ P E Y L+ +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICY 144
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TI 271
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 145 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 125 GTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGS 183
G VAVK ++ + +E +EV + QH N+V + +V G +++ EF+Q G+
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-GEELWVLMEFLQGGA 128
Query: 184 LDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL 243
L I R +E + C + V +AL+YLH V+H D+K ++ILL
Sbjct: 129 LTD-IVSQVRLNEEQIATVCEA----------VLQALAYLHAQG---VIHRDIKSDSILL 174
Query: 244 DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ R +SDFG +S+D + + GT ++APE I + + DI+S G++++E
Sbjct: 175 TLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDIWSLGIMVIE 233
Query: 304 LTGG 307
+ G
Sbjct: 234 MVDG 237
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------FPTSRRSEGHYSGGCLSWDLRYRV 212
LLG C PGGP ++ EF + G+L ++ P E Y L+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICY 144
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TI 271
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 145 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------FPTSRRSEGHYSGGCLSWDLRYRV 212
LLG C PGGP ++ EF + G+L ++ P E Y L+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICY 153
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TI 271
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 154 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 92 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 140
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD--QSRCITTIRGTRG 276
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + Q+R GT
Sbjct: 141 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQ 196
Query: 277 YLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y++PE + E+ + D+++ G ++ +L G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------FPTSRRSEGHYSGGCLSWDLRYRV 212
LLG C PGGP ++ EF + G+L ++ P E Y L+ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK-DFLTLEHLICY 155
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TI 271
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 156 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 245
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 104 NFQALLGHGS-SASVFKGILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQHVNL 158
F +LG GS S V L+ A+K + +EN E ++ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + Y + +NG L +I R G + C R+ A ++
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVS 143
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGY 277
AL YLH ++H D+KPENILL+E+ ++DFG +K++S + + GT Y
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++PE + E+ + D+++ G ++ +L G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y + +NG L +I R G + C R+ A ++ AL YLH ++
Sbjct: 108 YFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVSALEYLHG---KGII 154
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGYLAPEWILEQGVSEK 291
H D+KPENILL+E+ ++DFG +K++S + + GT Y++PE + E+ +
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 292 CDIYSYGMVLLELTGG 307
D+++ G ++ +L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y + +NG L +I R G + C R+ A ++ AL YLH ++
Sbjct: 109 YFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVSALEYLHG---KGII 155
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGYLAPEWILEQGVSEK 291
H D+KPENILL+E+ ++DFG +K++S + + GT Y++PE + E+ +
Sbjct: 156 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 215
Query: 292 CDIYSYGMVLLELTGG 307
D+++ G ++ +L G
Sbjct: 216 SDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y + +NG L +I R G + C R+ A ++ AL YLH ++
Sbjct: 108 YFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVSALEYLHG---KGII 154
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGYLAPEWILEQGVSEK 291
H D+KPENILL+E+ ++DFG +K++S + + GT Y++PE + E+ +
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 292 CDIYSYGMVLLELTGG 307
D+++ G ++ +L G
Sbjct: 215 SDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y + +NG L +I R G + C R+ A ++ AL YLH ++
Sbjct: 111 YFGLSYAKNGELLKYI-----RKIGSFDETCT----RFYTA-EIVSALEYLHGKG---II 157
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC-ITTIRGTRGYLAPEWILEQGVSEK 291
H D+KPENILL+E+ ++DFG +K++S + + GT Y++PE + E+ +
Sbjct: 158 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 217
Query: 292 CDIYSYGMVLLELTGG 307
D+++ G ++ +L G
Sbjct: 218 SDLWALGCIIYQLVAG 233
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 109 LGHGSSASVFKGILSDGT----SVAVKRINGEENGEKE----FRSEVAAIASAQHVNLVR 160
LG GS V +G + SVAVK + + + E F EV A+ S H NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L G + P P +V E GSL R+ +GH+ G LS R A+ VA+ +
Sbjct: 76 LYGVVLTP--PMKMVTELAPLGSL----LDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI--RGTRGYL 278
YL + R +H D+ N+LL + DFGL + + ++ + + +
Sbjct: 125 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL-TGGRR-----NVSLIEHGNDK 320
APE + + S D + +G+ L E+ T G+ N S I H DK
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 143 FRSEVAAIASAQHVNLVRL--LGYCVVPGGP-RYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
FR E A+ H +V + G P GP Y+V E++ +L + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----------H 108
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ G ++ V D +AL++ H + ++H DVKP NI++ V DFG+++
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 260 MSRDQSRCIT---TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++ D +T + GT YL+PE V + D+YS G VL E+ G
Sbjct: 166 IA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 143 FRSEVAAIASAQHVNLVRL--LGYCVVPGGP-RYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
FR E A+ H +V + G P GP Y+V E++ +L + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV----------H 108
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ G ++ V D +AL++ H + ++H DVKP NI++ V DFG+++
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 260 MSRDQSRCIT---TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++ D +T + GT YL+PE V + D+YS G VL E+ G
Sbjct: 166 IA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 30/232 (12%)
Query: 109 LGHGSSASVFKGILSDGT----SVAVKRINGEENGEKE----FRSEVAAIASAQHVNLVR 160
LG GS V +G + SVAVK + + + E F EV A+ S H NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L G + P P +V E GSL R+ +GH+ G LS R A+ VA+ +
Sbjct: 76 LYGVVLTP--PMKMVTELAPLGSL----LDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI--RGTRGYL 278
YL + R +H D+ N+LL + DFGL + + ++ + + +
Sbjct: 125 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL-TGGRR-----NVSLIEHGNDKSKNK 324
APE + + S D + +G+ L E+ T G+ N S I H DK +
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 233
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 109 LGHGSSASVFKGILSDGT----SVAVKRINGEENGEKE----FRSEVAAIASAQHVNLVR 160
LG GS V +G + SVAVK + + + E F EV A+ S H NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L G + P P +V E GSL R+ +GH+ G LS R A+ VA+ +
Sbjct: 76 LYGVVLTP--PMKMVTELAPLGSL----LDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI--RGTRGYL 278
YL + R +H D+ N+LL + DFGL + + ++ + + +
Sbjct: 125 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL-TGGRR-----NVSLIEHGNDK 320
APE + + S D + +G+ L E+ T G+ N S I H DK
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 91 IKFRSKELEEATDNFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAI 150
+ + S E++ F LG G V G VA+K I E EF E +
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVM 73
Query: 151 ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY 210
+ H LV+L G C P +++ E++ NG L +++ R +
Sbjct: 74 MNLSHEKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ---------LL 123
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT 270
+ DV +A+ YL + + LH D+ N L+++ VSDFGLS+ + D+
Sbjct: 124 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG 180
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + PE ++ S K DI+++G+++ E+
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 109 LGHGSSASVFKGILSDGT----SVAVKRINGEENGEKE----FRSEVAAIASAQHVNLVR 160
LG GS V +G + SVAVK + + + E F EV A+ S H NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L G + P P +V E GSL R+ +GH+ G LS R A+ VA+ +
Sbjct: 80 LYGVVLTP--PMKMVTELAPLGSL----LDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI--RGTRGYL 278
YL + R +H D+ N+LL + DFGL + + ++ + + +
Sbjct: 129 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL-TGGRR-----NVSLIEHGNDK 320
APE + + S D + +G+ L E+ T G+ N S I H DK
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 39/225 (17%)
Query: 107 ALLGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG-- 163
A+LG G+ V K + D A+K+I E SEV +AS H +VR
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 164 ----------YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
V ++ E+ +NG+L I H D +R+
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI---------HSENLNQQRDEYWRLF 122
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD---------- 263
+ +ALSY+H+ ++H D+KP NI +DE+ + DFGL+K + R
Sbjct: 123 RQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 264 ---QSRCITTIRGTRGYLAPEWILEQG-VSEKCDIYSYGMVLLEL 304
S +T+ GT Y+A E + G +EK D+YS G++ E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 143 FRSEVAAIASAQHVNLVRL--LGYCVVPGGP-RYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
FR E A+ H +V + G P GP Y+V E++ +L + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----------H 108
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ G ++ V D +AL++ H + ++H DVKP NI++ V DFG+++
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 260 MSRDQSRCIT---TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++ D +T + GT YL+PE V + D+YS G VL E+ G
Sbjct: 166 IA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 105 FQALLGHGSSASVFKG-ILSDG--TSVAVKRIN--GEENGEKEFRSEVAAIAS-AQHVNL 158
FQ ++G G+ V K I DG A+KR+ ++ ++F E+ + H N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE-------GHYSGGCLSWDLRYR 211
+ LLG C G YL E+ +G+L ++ SR E + + LS
Sbjct: 89 INLLGACE-HRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI 271
A DVA+ + YL + + +H D+ NIL+ ENY A ++DFGL SR Q +
Sbjct: 147 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL----SRGQE---VYV 196
Query: 272 RGTRGYLAPEWILEQGV-----SEKCDIYSYGMVLLEL 304
+ T G L W+ + + + D++SYG++L E+
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 143 FRSEVAAIASAQHVNLVRL--LGYCVVPGGP-RYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
FR E A+ H +V + G P GP Y+V E++ +L + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----------H 108
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ G ++ V D +AL++ H + ++H DVKP NI++ V DFG+++
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 260 MSRDQSRCIT---TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++ D +T + GT YL+PE V + D+YS G VL E+ G
Sbjct: 166 IA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------FPTSRRSEGHYSGGCLSWDLRYRV 212
LLG C PGGP ++ EF + G+L ++ P E Y L+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICY 153
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TI 271
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 154 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 30/232 (12%)
Query: 109 LGHGSSASVFKGILSDGT----SVAVKRINGEENGEKE----FRSEVAAIASAQHVNLVR 160
LG GS V +G + SVAVK + + + E F EV A+ S H NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L G + P P +V E GSL R+ +GH+ G LS R A+ VA+ +
Sbjct: 86 LYGVVLTP--PMKMVTELAPLGSL----LDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI--RGTRGYL 278
YL + R +H D+ N+LL + DFGL + + ++ + + +
Sbjct: 135 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL-TGGRR-----NVSLIEHGNDKSKNK 324
APE + + S D + +G+ L E+ T G+ N S I H DK +
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 243
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------FPTSRRSEGHYSGGCLSWDLRYRV 212
LLG C PGGP ++ EF + G+L ++ P E Y L+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICY 153
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TI 271
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 154 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 91 IKFRSKELEEATDNFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAI 150
+ + S E++ F LG G V G VA+K I E EF E +
Sbjct: 5 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVM 64
Query: 151 ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY 210
+ H LV+L G C P +++ E++ NG L +++ R +
Sbjct: 65 MNLSHEKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ---------LL 114
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT 270
+ DV +A+ YL + + LH D+ N L+++ VSDFGLS+ + D+
Sbjct: 115 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 171
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + PE ++ S K DI+++G+++ E+
Sbjct: 172 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQ 154
S E++ F LG G V G VA+K I E EF E + +
Sbjct: 2 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS 61
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H LV+L G C P +++ E++ NG L +++ R + +
Sbjct: 62 HEKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ---------LLEMCK 111
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
DV +A+ YL + + LH D+ N L+++ VSDFGLS+ + D+ +
Sbjct: 112 DVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 168
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ PE ++ S K DI+++G+++ E+
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 198
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 109 LGHGSSASVFKGILSDGT----SVAVKRINGEENGEKE----FRSEVAAIASAQHVNLVR 160
LG GS V +G + SVAVK + + + E F EV A+ S H NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L G + P P +V E GSL R+ +GH+ G LS R A+ VA+ +
Sbjct: 80 LYGVVLTP--PMKMVTELAPLGSL----LDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI--RGTRGYL 278
YL + R +H D+ N+LL + DFGL + + ++ + + +
Sbjct: 129 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL-TGGRR-----NVSLIEHGNDK 320
APE + + S D + +G+ L E+ T G+ N S I H DK
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------FPTSRRSEGHYSGGCLSWDLRYRV 212
LLG C PGGP ++ EF + G+L ++ P E Y L+ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICY 190
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TI 271
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 191 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 280
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 143 FRSEVAAIASAQHVNLVRL--LGYCVVPGGP-RYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
FR E A+ H +V + G P GP Y+V E++ +L + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----------H 108
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ G ++ V D +AL++ H + ++H DVKP NIL+ V DFG+++
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARA 165
Query: 260 MSRDQSRCITT--IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++ + T + GT YL+PE V + D+YS G VL E+ G
Sbjct: 166 IADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + SR E
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT 114
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ RV+H D+KPEN+LL N ++DFG S
Sbjct: 115 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVH 161
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
SR + C GT YL PE I + EK D++S G++ E G
Sbjct: 162 APSSRRDTLC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQ 154
S E++ F LG G V G VA+K I E EF E + +
Sbjct: 3 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS 62
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H LV+L G C P +++ E++ NG L +++ R + +
Sbjct: 63 HEKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ---------LLEMCK 112
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
DV +A+ YL + + LH D+ N L+++ VSDFGLS+ + D+ +
Sbjct: 113 DVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 169
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ PE ++ S K DI+++G+++ E+
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 109 LGHGSSASVFKGIL-SDGTSVAVK--RINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
+G G+ VF G L +D T VAVK R + + +F E + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P Y+V E +Q G F T R+EG L ++ D A + YL +
Sbjct: 182 TQ-KQPIYIVMELVQGGD-----FLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLES 231
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILE 285
C +H D+ N L+ E +SDFG MSR+++ + G + +W
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFG----MSREEADGVXAASGGLRQVPVKWTAP 284
Query: 286 QGV-----SEKCDIYSYGMVLLE 303
+ + S + D++S+G++L E
Sbjct: 285 EALNYGRYSSESDVWSFGILLWE 307
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 105 FQALLGHGSSASVFKG-ILSDG--TSVAVKRIN--GEENGEKEFRSEVAAIAS-AQHVNL 158
FQ ++G G+ V K I DG A+KR+ ++ ++F E+ + H N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE-------GHYSGGCLSWDLRYR 211
+ LLG C G YL E+ +G+L ++ SR E + + LS
Sbjct: 79 INLLGACE-HRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI 271
A DVA+ + YL + + +H D+ NIL+ ENY A ++DFGL SR Q +
Sbjct: 137 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL----SRGQE---VYV 186
Query: 272 RGTRGYLAPEWILEQGV-----SEKCDIYSYGMVLLEL 304
+ T G L W+ + + + D++SYG++L E+
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 224
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------FPTSRRSEGHYSGGCLSWDLRYRV 212
LLG C PGGP ++ EF + G+L ++ P E Y L+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICY 144
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TI 271
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 145 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 30/232 (12%)
Query: 109 LGHGSSASVFKGILSDGT----SVAVKRINGEENGEKE----FRSEVAAIASAQHVNLVR 160
LG GS V +G + SVAVK + + + E F EV A+ S H NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L G + P P +V E GSL R+ +GH+ G LS R A+ VA+ +
Sbjct: 86 LYGVVLTP--PMKMVTELAPLGSL----LDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI--RGTRGYL 278
YL + R +H D+ N+LL + DFGL + + ++ + + +
Sbjct: 135 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL-TGGRR-----NVSLIEHGNDKSKNK 324
APE + + S D + +G+ L E+ T G+ N S I H DK +
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 243
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 109 LGHGSSASVFKGIL------SDGTSVAVKRI-NGEENGEKEFRSEVAAIASAQHVNLVRL 161
LG G+ VF D VAVK + + +N K+F E + + QH ++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 162 LGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC---LSWDLRYRVAIDVAK 218
G C V G P +V+E++++G L+ ++ + G L+ +A +A
Sbjct: 81 YGVC-VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGY 277
+ YL +H D+ N L+ EN + DFG+S+ + S D R +
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ PE I+ + + + D++S G+VL E+
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 91 IKFRSKELEEATDNFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAI 150
+ + S E++ F LG G V G VA+K I E EF E +
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVM 73
Query: 151 ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY 210
+ H LV+L G C P +++ E++ NG L +++ R +
Sbjct: 74 MNLSHEKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ---------LL 123
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT 270
+ DV +A+ YL + + LH D+ N L+++ VSDFGLS+ + D+
Sbjct: 124 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + PE ++ S K DI+++G+++ E+
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------FPTSRRSEGHYSGGCLSWDLRYRV 212
LLG C PGGP ++ EF + G+L ++ P E Y L+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICY 144
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TI 271
+ VAK + +L + + +H D+ NILL E + DFGL++ + +D
Sbjct: 145 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++APE I ++ + + D++S+G++L E+
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 143 FRSEVAAIASAQHVNLVRL--LGYCVVPGGP-RYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
FR E A+ H +V + G P GP Y+V E++ +L + +
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----------H 125
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ G ++ V D +AL++ H + ++H DVKP NI++ V DFG+++
Sbjct: 126 TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 182
Query: 260 MSRDQSRCIT---TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++ D +T + GT YL+PE V + D+YS G VL E+ G
Sbjct: 183 IA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 123 SDGTSVAVKRINGEENGEKEFR---SEVAAIASAQHVNLVRLLGYCV-VPGGPRYLVYEF 178
SDG + K ++ E E + SEV + +H N+VR + Y+V E+
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 179 IQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLH--NDCRSRVLHLDV 236
+ G L I T E Y L + RV + AL H +D VLH D+
Sbjct: 89 CEGGDLASVI--TKGTKERQY----LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 237 KPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYS 296
KP N+ LD + DFGL+++++ D S + GT Y++PE + +EK DI+S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 297 YGMVLLEL 304
G +L EL
Sbjct: 202 LGCLLYEL 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 111
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 112 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 156
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
S TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 157 -CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 37/222 (16%)
Query: 109 LGHGSSASVFKGILS-DGTSVAVKRI---NGEENGEKEFRSEVAAIASAQHVNLVRLLGY 164
LG G VF+ D + A+KRI N E EK R EV A+A +H +VR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR-EVKALAKLEHPGIVRYFNA 71
Query: 165 CV--------VPGGPRYLVY---EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
+ P P+ +Y + + +L W+ E S CL +
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV-CL------HIF 124
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR--CITTI 271
+ +A+A+ +LH+ ++H D+KP NI + V DFGL M +D+ +T +
Sbjct: 125 LQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 272 R---------GTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
GT+ Y++PE I S K DI+S G++L EL
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 109 LGHGSSASVFKGIL-SDGTSVAVK--RINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
+G G+ VF G L +D T VAVK R + + +F E + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
P Y+V E +Q G F T R+EG L ++ D A + YL +
Sbjct: 182 TQ-KQPIYIVMELVQGGD-----FLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLES 231
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILE 285
C +H D+ N L+ E +SDFG MSR+++ + G + +W
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAP 284
Query: 286 QGV-----SEKCDIYSYGMVLLE 303
+ + S + D++S+G++L E
Sbjct: 285 EALNYGRYSSESDVWSFGILLWE 307
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 123 SDGTSVAVKRINGEEN--GEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQ 180
S G +K IN + + ++ +E+ + S H N++++ Y+V E +
Sbjct: 45 SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE-VFEDYHNMYIVMETCE 103
Query: 181 NGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPEN 240
G L I R G LS + + AL+Y H+ V+H D+KPEN
Sbjct: 104 GGELLERIVSAQAR------GKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPEN 154
Query: 241 ILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSY 297
IL + + + DFGL++L D+ T GT Y+APE + ++ V+ KCDI+S
Sbjct: 155 ILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPE-VFKRDVTFKCDIWSA 211
Query: 298 GMVLLELTGG 307
G+V+ L G
Sbjct: 212 GVVMYFLLTG 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 104 NFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG 163
F LG G V G VA+K I E EF E + + H LV+L G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C P +++ E++ NG L +++ R + + DV +A+ YL
Sbjct: 67 VC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ---------LLEMCKDVCEAMEYL 116
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
+ + LH D+ N L+++ VSDFGLS+ + D+ + + PE +
Sbjct: 117 ES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 173
Query: 284 LEQGVSEKCDIYSYGMVLLEL 304
+ S K DI+++G+++ E+
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEI 194
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 32/212 (15%)
Query: 112 GSSASVFKG-ILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGY---CVV 167
G V+K +L++ +V + I +++ + E+ EV ++ +H N+++ +G
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRGTS 92
Query: 168 PGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC 227
+L+ F + GSL ++ +SW+ +A +A+ L+YLH D
Sbjct: 93 VDVDLWLITAFHEKGSLSDFL-----------KANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 228 -------RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTRGYLA 279
+ + H D+K +N+LL N A ++DFGL+ +S T + GTR Y+A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 280 PEWILEQGVS------EKCDIYSYGMVLLELT 305
PE +LE ++ + D+Y+ G+VL EL
Sbjct: 202 PE-VLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 31/213 (14%)
Query: 106 QALLGHGSSASVF--KGILSDGTSVAVKRINGEENGEKEFRS----EVAAIASAQHVNLV 159
Q +LG GS V K ++ G AVK I+ + +K + EV + H N++
Sbjct: 31 QRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKA 219
+L + G YLV E G L I R SE + R+ V
Sbjct: 90 KLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA----------RIIRQVLSG 138
Query: 220 LSYLHNDCRSRVLHLDVKPENILL-----DENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++Y+H +++++H D+KPEN+LL D N R + DFGLS + S+ + GT
Sbjct: 139 ITYMH---KNKIVHRDLKPENLLLESKSKDANIRII--DFGLSTHF--EASKKMKDKIGT 191
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y+APE +L EKCD++S G++L L G
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G + + S+ E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT 115
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 116 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 160
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 161 VHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KGI + DG +V + R N KE E +A + R
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSL-DHWIFPTSRRSEGHY-SGGCLSWDLRYRVAIDVAK 218
LLG C+ LV + + G L DH R + G S L+W + +AK
Sbjct: 84 LLGICLT--STVQLVTQLMPYGCLLDH-----VRENRGRLGSQDLLNW------CMQIAK 130
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+SYL + R++H D+ N+L+ ++DFGL++L+ D+ T G +
Sbjct: 131 GMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE----TEYHADGGKV 183
Query: 279 APEW-----ILEQGVSEKCDIYSYGMVLLEL 304
+W IL + + + D++SYG+ + EL
Sbjct: 184 PIKWMALESILRRRFTHQSDVWSYGVTVWEL 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 30/239 (12%)
Query: 84 RKVAGVPIKFRSKELEEATDNFQALLGHGSSASVFKG-ILSDG--TSVAVKRIN--GEEN 138
RKV P L+ FQ ++G G+ V K I DG A+KR+ ++
Sbjct: 5 RKVKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD 64
Query: 139 GEKEFRSEVAAIAS-AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE- 196
++F E+ + H N++ LLG C G YL E+ +G+L ++ SR E
Sbjct: 65 DHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFL-RKSRVLET 122
Query: 197 ------GHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV 250
+ + LS A DVA+ + YL + + +H ++ NIL+ ENY A
Sbjct: 123 DPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAK 179
Query: 251 VSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV-----SEKCDIYSYGMVLLEL 304
++DFGL SR Q ++ T G L W+ + + + D++SYG++L E+
Sbjct: 180 IADFGL----SRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 231
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 26/210 (12%)
Query: 107 ALLGHGSSASVFKG--ILSDGTSVAVKRI---NGEENGEKEFRSEVAAI---ASAQHVNL 158
A +G G+ VFK + + G VA+KR+ GEE EVA + + +H N+
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 159 VRLLGYCVVPGGPR----YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
VRL C V R LV+E + + L ++ + E + D+ +++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIK-DMMFQLL- 130
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
+ L +LH+ RV+H D+KP+NIL+ + + ++DFGL+++ S + +T++ T
Sbjct: 131 ---RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVT 182
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
Y APE +L+ + D++S G + E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 105 FQALLGHGSSASVF--KGILSDGTSVAVKRINGEENG-EKEFRSEVAAIASAQHVNLVRL 161
F +LG G+ + VF K L+ G A+K I + +E+A + +H N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 162 LGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
YLV + + G L I +E S V V A+
Sbjct: 72 ED-IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS----------LVIQQVLSAVK 120
Query: 222 YLHNDCRSRVLHLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
YLH + ++H D+KPEN+L +EN + +++DFGLSK+ +Q+ ++T GT GY+
Sbjct: 121 YLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYV 174
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE + ++ S+ D +S G++ L G
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 123 SDGTSVAVKRINGEENGEKEFR---SEVAAIASAQHVNLVRLLGYCV-VPGGPRYLVYEF 178
SDG + K ++ E E + SEV + +H N+VR + Y+V E+
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 179 IQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLH--NDCRSRVLHLDV 236
+ G L I T E Y L + RV + AL H +D VLH D+
Sbjct: 89 CEGGDLASVI--TKGTKERQY----LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 237 KPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYS 296
KP N+ LD + DFGL+++++ D+ + GT Y++PE + +EK DI+S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 297 YGMVLLEL 304
G +L EL
Sbjct: 202 LGCLLYEL 209
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 26/210 (12%)
Query: 107 ALLGHGSSASVFKG--ILSDGTSVAVKRI---NGEENGEKEFRSEVAAI---ASAQHVNL 158
A +G G+ VFK + + G VA+KR+ GEE EVA + + +H N+
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 159 VRLLGYCVVPGGPR----YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
VRL C V R LV+E + + L ++ + E + D+ +++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIK-DMMFQLL- 130
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
+ L +LH+ RV+H D+KP+NIL+ + + ++DFGL+++ S + +T++ T
Sbjct: 131 ---RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVT 182
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
Y APE +L+ + D++S G + E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 115
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 116 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 160
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 161 VHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 115
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 116 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 160
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 161 VHAPSSR-RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V G VAVK I E EF E + H LV+ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC-SK 74
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y+V E+I NG L +++ RS G L + DV + +++L +
Sbjct: 75 EYPIYIVTEYISNGCLLNYL-----RSH----GKGLEPSQLLEMCYDVCEGMAFLES--- 122
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+ +H D+ N L+D + VSDFG+++ + DQ + + APE
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 289 SEKCDIYSYGMVLLEL 304
S K D++++G+++ E+
Sbjct: 183 SSKSDVWAFGILMWEV 198
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 114 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 158
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 159 VHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 106 QALLGHGSSASVFKGILSD---GTSVAVKRINGEENGEKEFRS----EVAAIASAQHVNL 158
Q +LG GS V + D G AVK I+ + +K + EV + H N+
Sbjct: 37 QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 94
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
++L + G YLV E G L I R SE + R+ V
Sbjct: 95 MKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA----------RIIRQVLS 143
Query: 219 ALSYLHNDCRSRVLHLDVKPENILL-----DENYRAVVSDFGLSKLMSRDQSRCITTIRG 273
++Y+H +++++H D+KPEN+LL D N R + DFGLS + S+ + G
Sbjct: 144 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRII--DFGLSTHF--EASKKMKDKIG 196
Query: 274 TRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE +L EKCD++S G++L L G
Sbjct: 197 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 114 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 158
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 159 VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 127
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 128 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 172
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 173 VHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ + T VAVK + + F +E + + QH LV+L + VV
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVT 80
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y++ EF+ GSL ++ + EG D + +A+ ++++ +
Sbjct: 81 KEPIYIITEFMAKGSLLDFL----KSDEGSKQPLPKLIDF----SAQIAEGMAFIE---Q 129
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ + ++DFGL++++ ++ + + APE I
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 289 SEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L+E+ T GR
Sbjct: 190 TIKSDVWSFGILLMEIVTYGR 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 107
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 108 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 152
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 153 VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 126 TSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFIQN 181
T VAVK + + EK+ ++ + +H N++ LLG C GP Y++ E+
Sbjct: 61 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASK 118
Query: 182 GSLDHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
G+L ++ +RR G H LS A VA+ + YL + +H
Sbjct: 119 GNLREYL--QARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 173
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
D+ N+L+ E+ ++DFGL++ + D + T R ++APE + ++ + +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 293 DIYSYGMVLLEL 304
D++S+G++L E+
Sbjct: 234 DVWSFGVLLWEI 245
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 26/210 (12%)
Query: 107 ALLGHGSSASVFKG--ILSDGTSVAVKRI---NGEENGEKEFRSEVAAI---ASAQHVNL 158
A +G G+ VFK + + G VA+KR+ GEE EVA + + +H N+
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 159 VRLLGYCVVPGGPR----YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
VRL C V R LV+E + + L ++ + E + D+ +++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIK-DMMFQLL- 130
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
+ L +LH+ RV+H D+KP+NIL+ + + ++DFGL+++ S + +T++ T
Sbjct: 131 ---RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVT 182
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
Y APE +L+ + D++S G + E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 111 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 155
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 156 VHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 109
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 110 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 154
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 155 VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 114
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 115 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 159
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 160 VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 30/190 (15%)
Query: 201 GGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM 260
G + D+ ++A+ + KAL +LH+ + V+H DVKP N+L++ + + DFG+S +
Sbjct: 103 GQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160
Query: 261 SRDQSRCITTIRGTRGYLAPEWI----LEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
D ++ I G + Y+APE I ++G S K DI+S G+ ++EL +++
Sbjct: 161 VDDVAKDIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL-------AILRF 211
Query: 317 GNDKSKNKWQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERAR 376
D +Q ++V E ++ + + E VD C+++ ++
Sbjct: 212 PYDSWGTPFQQLKQVVEEPSP-----QLPADKFSAE----------FVDFTSQCLKKNSK 256
Query: 377 LRPSMARVVE 386
RP+ +++
Sbjct: 257 ERPTYPELMQ 266
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 50/293 (17%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 78 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 137 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 189
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEK 335
W+ L+ GV + D++S+G+VL E+ +L E Q + + NE+
Sbjct: 190 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAE----------QPYQGLSNEQ 233
Query: 336 MKEGKLMEIVDQRLTDEGGI---DETQVRRLVDVAFWCIQERARLRPSMARVV 385
+ R EGG+ + L+++ C Q ++RPS ++
Sbjct: 234 V----------LRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 106 QALLGHGSSASVFKGILSD---GTSVAVKRINGEENGEKEFRS----EVAAIASAQHVNL 158
Q +LG GS V + D G AVK I+ + +K + EV + H N+
Sbjct: 55 QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 112
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
++L + G YLV E G L I R SE + R+ V
Sbjct: 113 MKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA----------RIIRQVLS 161
Query: 219 ALSYLHNDCRSRVLHLDVKPENILL-----DENYRAVVSDFGLSKLMSRDQSRCITTIRG 273
++Y+H +++++H D+KPEN+LL D N R + DFGLS + S+ + G
Sbjct: 162 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRII--DFGLSTHF--EASKKMKDKIG 214
Query: 274 TRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE +L EKCD++S G++L L G
Sbjct: 215 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 106 QALLGHGSSASVFKGILSD---GTSVAVKRINGEENGEKEFRS----EVAAIASAQHVNL 158
Q +LG GS V + D G AVK I+ + +K + EV + H N+
Sbjct: 54 QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 111
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
++L + G YLV E G L I R SE + R+ V
Sbjct: 112 MKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA----------RIIRQVLS 160
Query: 219 ALSYLHNDCRSRVLHLDVKPENILL-----DENYRAVVSDFGLSKLMSRDQSRCITTIRG 273
++Y+H +++++H D+KPEN+LL D N R + DFGLS + S+ + G
Sbjct: 161 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRII--DFGLSTHF--EASKKMKDKIG 213
Query: 274 TRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE +L EKCD++S G++L L G
Sbjct: 214 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 136
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 137 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 181
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 182 VHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 87 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 198
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELT 305
W+ L+ GV + D++S+G+VL E+
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 109 LGHGSSASVF----KGILS--DGTSVAVKRIN-GEENGEKEFRSEVAAIASAQHVNLVRL 161
LG G+ VF +L D VAVK + E+ ++F+ E + QH ++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 162 LGYCVVPGGPRYLVYEFIQNGSLDHWI---FPTSRRSEG--HYSGGCLSWDLRYRVAIDV 216
G C G P +V+E++++G L+ ++ P ++ G + G L VA V
Sbjct: 86 FGVC-TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQ----SRCITTI 271
A + YL +H D+ N L+ + + DFG+S+ + S D R + I
Sbjct: 145 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++ PE IL + + + D++S+G+VL E+
Sbjct: 202 R----WMPPESILYRKFTTESDVWSFGVVLWEI 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 109 LGHGSSASVF----KGILS--DGTSVAVKRIN-GEENGEKEFRSEVAAIASAQHVNLVRL 161
LG G+ VF +L D VAVK + E+ ++F+ E + QH ++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 162 LGYCVVPGGPRYLVYEFIQNGSLDHWI---FPTSRRSEG--HYSGGCLSWDLRYRVAIDV 216
G C G P +V+E++++G L+ ++ P ++ G + G L VA V
Sbjct: 80 FGVC-TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQ----SRCITTI 271
A + YL +H D+ N L+ + + DFG+S+ + S D R + I
Sbjct: 139 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++ PE IL + + + D++S+G+VL E+
Sbjct: 196 R----WMPPESILYRKFTTESDVWSFGVVLWEI 224
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 201 GGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM 260
G + D+ ++A+ + KAL +LH+ + V+H DVKP N+L++ + + DFG+S +
Sbjct: 147 GQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204
Query: 261 SRDQSRCITTIRGTRGYLAPEWI----LEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
++ I G + Y+APE I ++G S K DI+S G+ ++EL +++
Sbjct: 205 VDSVAKTIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL-------AILRF 255
Query: 317 GNDKSKNKWQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERAR 376
D +Q ++V E ++ + + E VD C+++ ++
Sbjct: 256 PYDSWGTPFQQLKQVVEEPSP-----QLPADKFSAE----------FVDFTSQCLKKNSK 300
Query: 377 LRPSMARVVE 386
RP+ +++
Sbjct: 301 ERPTYPELMQ 310
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 126 TSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFIQN 181
T VAVK + + EK+ ++ + +H N++ LLG C GP Y++ E+
Sbjct: 46 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASK 103
Query: 182 GSLDHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
G+L ++ +RR G H LS A VA+ + YL + +H
Sbjct: 104 GNLREYL--QARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 158
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
D+ N+L+ E+ ++DFGL++ + D + T R ++APE + ++ + +
Sbjct: 159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 218
Query: 293 DIYSYGMVLLEL 304
D++S+G++L E+
Sbjct: 219 DVWSFGVLLWEI 230
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 39/225 (17%)
Query: 107 ALLGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG-- 163
A+LG G+ V K + D A+K+I E SEV +AS H +VR
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 164 ----------YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
V ++ E+ +N +L I H D +R+
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI---------HSENLNQQRDEYWRLF 122
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD---------- 263
+ +ALSY+H+ ++H D+KP NI +DE+ + DFGL+K + R
Sbjct: 123 RQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 264 ---QSRCITTIRGTRGYLAPEWILEQG-VSEKCDIYSYGMVLLEL 304
S +T+ GT Y+A E + G +EK D+YS G++ E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 126 TSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFIQN 181
T VAVK + + EK+ ++ + +H N++ LLG C GP Y++ E+
Sbjct: 61 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASK 118
Query: 182 GSLDHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
G+L ++ +RR G H LS A VA+ + YL + +H
Sbjct: 119 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 173
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
D+ N+L+ E+ ++DFGL++ + D + T R ++APE + ++ + +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 293 DIYSYGMVLLEL 304
D++S+G++L E+
Sbjct: 234 DVWSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 126 TSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFIQN 181
T VAVK + + EK+ ++ + +H N++ LLG C GP Y++ E+
Sbjct: 54 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASK 111
Query: 182 GSLDHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
G+L ++ +RR G H LS A VA+ + YL + +H
Sbjct: 112 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 166
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
D+ N+L+ E+ ++DFGL++ + D + T R ++APE + ++ + +
Sbjct: 167 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 226
Query: 293 DIYSYGMVLLEL 304
D++S+G++L E+
Sbjct: 227 DVWSFGVLLWEI 238
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 126 TSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFIQN 181
T VAVK + + EK+ ++ + +H N++ LLG C GP Y++ E+
Sbjct: 50 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASK 107
Query: 182 GSLDHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
G+L ++ +RR G H LS A VA+ + YL + +H
Sbjct: 108 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 162
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
D+ N+L+ E+ ++DFGL++ + D + T R ++APE + ++ + +
Sbjct: 163 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 222
Query: 293 DIYSYGMVLLEL 304
D++S+G++L E+
Sbjct: 223 DVWSFGVLLWEI 234
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ + T VAVK + + F +E + + QH LV+L + VV
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVT 253
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y++ EF+ GSL ++ + EG D + +A+ ++++ +
Sbjct: 254 KEPIYIITEFMAKGSLLDFL----KSDEGSKQPLPKLIDF----SAQIAEGMAFIE---Q 302
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ + ++DFGL++++ ++ + + APE I
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 289 SEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L+E+ T GR
Sbjct: 363 TIKSDVWSFGILLMEIVTYGR 383
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 126 TSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFIQN 181
T VAVK + + EK+ ++ + +H N++ LLG C GP Y++ E+
Sbjct: 61 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASK 118
Query: 182 GSLDHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
G+L ++ +RR G H LS A VA+ + YL + +H
Sbjct: 119 GNLREYL--QARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 173
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
D+ N+L+ E+ ++DFGL++ + D + T R ++APE + ++ + +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 293 DIYSYGMVLLEL 304
D++S+G++L E+
Sbjct: 234 DVWSFGVLLWEI 245
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 125 GTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQ 180
G VAVK +N ++ + + + E+ + +H ++++L P ++V E++
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD-FFMVMEYVS 94
Query: 181 NGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPEN 240
G L +I R E + R R+ + A+ Y H R V+H D+KPEN
Sbjct: 95 GGELFDYICKHGRVEE---------MEAR-RLFQQILSAVDYCH---RHMVVHRDLKPEN 141
Query: 241 ILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI---LEQGVSEKCDIYSY 297
+LLD + A ++DFGLS +MS + T G+ Y APE I L G + DI+S
Sbjct: 142 VLLDAHMNAKIADFGLSNMMS--DGEFLRTSCGSPNYAAPEVISGRLYAG--PEVDIWSC 197
Query: 298 GMVLLELTGG 307
G++L L G
Sbjct: 198 GVILYALLCG 207
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 104 NFQALLGHGSSASVFKGILSDGTS---VAVKRINGEENGEKEFRS---EVAAIASAQHVN 157
N +LG GS V K D + AVK IN K+ + EV + H N
Sbjct: 25 NIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
+++L + Y+V E G L I R SE + R+ V
Sbjct: 83 IMKLFE-ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA----------RIIKQVF 131
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIRGT 274
++Y+H + ++H D+KPENILL+ + + DFGLS Q+ + GT
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGT 186
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y+APE +L EKCD++S G++L L G
Sbjct: 187 AYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 112
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL +++FG S
Sbjct: 113 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS-- 157
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 158 VHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 126 TSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFIQN 181
T VAVK + + EK+ ++ + +H N++ LLG C GP Y++ E+
Sbjct: 53 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASK 110
Query: 182 GSLDHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
G+L ++ +RR G H LS A VA+ + YL + +H
Sbjct: 111 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 165
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
D+ N+L+ E+ ++DFGL++ + D + T R ++APE + ++ + +
Sbjct: 166 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 225
Query: 293 DIYSYGMVLLEL 304
D++S+G++L E+
Sbjct: 226 DVWSFGVLLWEI 237
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 95 SKELEEATDNFQALLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRSEVAAIASA 153
+K+ EE D + L G GS SV+K I + G VA+K++ E + + E E++ +
Sbjct: 24 TKQPEEVFDVLEKL-GEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-EIIKEISIMQQC 81
Query: 154 QHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
++V+ G ++V E+ GS+ I L+ D +
Sbjct: 82 DSPHVVKYYG-SYFKNTDLWIVMEYCGAGSVSDII---------RLRNKTLTEDEIATIL 131
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRG 273
K L YLH R +H D+K NILL+ A ++DFG++ ++ ++ I G
Sbjct: 132 QSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-G 187
Query: 274 TRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
T ++APE I E G + DI+S G+ +E+ G+
Sbjct: 188 TPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 111
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 112 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 158
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
SR + C GT YL PE I + EK D++S G++ E G+
Sbjct: 159 APSSRRDTLC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 104 NFQALLGHGSSASVFKGILSDGTS---VAVKRINGEENGEKEFRS---EVAAIASAQHVN 157
N +LG GS V K D + AVK IN K+ + EV + H N
Sbjct: 25 NIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
+++L + Y+V E G L I R SE + R+ V
Sbjct: 83 IMKLFE-ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA----------RIIKQVF 131
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIRGT 274
++Y+H + ++H D+KPENILL+ + + DFGLS Q+ + GT
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGT 186
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y+APE +L EKCD++S G++L L G
Sbjct: 187 AYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL +++FG S
Sbjct: 114 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS-- 158
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR TT+ GT YL PE I + EK D++S G++ E G+
Sbjct: 159 VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 109 LGHGSSASVF----KGILS--DGTSVAVKRIN-GEENGEKEFRSEVAAIASAQHVNLVRL 161
LG G+ VF +L D VAVK + E+ ++F+ E + QH ++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 162 LGYCVVPGGPRYLVYEFIQNGSLDHWI---FPTSRRSEG--HYSGGCLSWDLRYRVAIDV 216
G C G P +V+E++++G L+ ++ P ++ G + G L VA V
Sbjct: 109 FGVC-TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQ----SRCITTI 271
A + YL +H D+ N L+ + + DFG+S+ + S D R + I
Sbjct: 168 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
R ++ PE IL + + + D++S+G+VL E+
Sbjct: 225 R----WMPPESILYRKFTTESDVWSFGVVLWEI 253
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 126 TSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFIQN 181
T VAVK + + EK+ ++ + +H N++ LLG C GP Y++ E+
Sbjct: 102 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASK 159
Query: 182 GSLDHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
G+L ++ +RR G H LS A VA+ + YL + +H
Sbjct: 160 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 214
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
D+ N+L+ E+ ++DFGL++ + D + T R ++APE + ++ + +
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274
Query: 293 DIYSYGMVLLEL 304
D++S+G++L E+
Sbjct: 275 DVWSFGVLLWEI 286
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 104 NFQALLGHGSSASVFKGILSDGTS---VAVKRINGEENGEKEFRS---EVAAIASAQHVN 157
N +LG GS V K D + AVK IN K+ + EV + H N
Sbjct: 25 NIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 158 LVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVA 217
+++L + Y+V E G L I R SE + R+ V
Sbjct: 83 IMKLFE-ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA----------RIIKQVF 131
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIRGT 274
++Y+H + ++H D+KPENILL+ + + DFGLS Q+ + GT
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGT 186
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y+APE +L EKCD++S G++L L G
Sbjct: 187 AYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 111 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 155
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR T + GT YL PE I + EK D++S G++ E G+
Sbjct: 156 VHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 111
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 112 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 156
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR T + GT YL PE I + EK D++S G++ E G+
Sbjct: 157 VHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 105 FQALLGHGSSASVFK----GILSDGTS--VAVKRINGE-ENGEKE-FRSEVAAIAS-AQH 155
F +LG G+ V GI G S VAVK + + ++ E+E SE+ + H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWI-------------FPTSRRSEGHYSGG 202
N+V LLG C + GP YL++E+ G L +++ + +R E
Sbjct: 109 ENIVNLLGACTL-SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR 262
L+++ A VAK + +L +H D+ N+L+ + DFGL++ +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 263 DQSRCI-TTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
D + + R ++APE + E + K D++SYG++L E+
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 84 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 143 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 195
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEK 335
W+ L+ GV + D++S+G+VL E+ +L E Q + + NE+
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAE----------QPYQGLSNEQ 239
Query: 336 MKEGKLMEIVDQRLTDEGGI---DETQVRRLVDVAFWCIQERARLRPSMARVV 385
+ R EGG+ + L ++ C Q ++RPS ++
Sbjct: 240 V----------LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 25/190 (13%)
Query: 125 GTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQ 180
G VAVK +N ++ + + R E+ + +H ++++L P ++V E++
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD-IFMVMEYVS 99
Query: 181 NGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPEN 240
G L +I R E R+ + + Y H R V+H D+KPEN
Sbjct: 100 GGELFDYICKNGRLDEKESR----------RLFQQILSGVDYCH---RHMVVHRDLKPEN 146
Query: 241 ILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI---LEQGVSEKCDIYSY 297
+LLD + A ++DFGLS +MS + G+ Y APE I L G + DI+S
Sbjct: 147 VLLDAHMNAKIADFGLSNMMS--DGEFLRXSCGSPNYAAPEVISGRLYAG--PEVDIWSS 202
Query: 298 GMVLLELTGG 307
G++L L G
Sbjct: 203 GVILYALLCG 212
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 120/231 (51%), Gaps = 21/231 (9%)
Query: 101 ATDNFQAL--LGHGSSASVFKGI-LSDGTSVAVK--RINGEENGEKEFRSEVAAIASAQH 155
++ F+ L LG+G+ A+V+KG+ + G VA+K +++ EE E++ + +H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 156 VNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
N+VRL Y V+ + LV+EF+ N L ++ R+ G+ G L +L
Sbjct: 63 ENIVRL--YDVIHTENKLTLVFEFMDN-DLKKYM---DSRTVGNTPRG-LELNLVKYFQW 115
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
+ + L++ H + ++LH D+KP+N+L+++ + + DFGL++ + + + T
Sbjct: 116 QLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-T 171
Query: 275 RGYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNK 324
Y AP+ ++ + S DI+S G +L E+ G+ L ND+ + K
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK---PLFPGTNDEEQLK 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 111 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 155
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR T + GT YL PE I + EK D++S G++ E G+
Sbjct: 156 VHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 114 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
SR + C GT YL PE I + EK D++S G++ E G+
Sbjct: 161 APSSRRAALC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 111 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
SR + C GT YL PE I + EK D++S G++ E G+
Sbjct: 158 APSSRRAALC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 86 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 197
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELT 305
W+ L+ GV + D++S+G+VL E+
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 115
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 116 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 160
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR T + GT YL PE I + EK D++S G++ E G+
Sbjct: 161 VHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 86 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 197
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEK 335
W+ L+ GV + D++S+G+VL E+ +L E Q + + NE+
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAE----------QPYQGLSNEQ 241
Query: 336 MKEGKLMEIVDQRLTDEGGI---DETQVRRLVDVAFWCIQERARLRPSMARVV 385
+ R EGG+ + L ++ C Q ++RPS ++
Sbjct: 242 V----------LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 111 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 155
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR T + GT YL PE I + EK D++S G++ E G+
Sbjct: 156 VHAPSSR-RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 111 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 155
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR T + GT YL PE I + EK D++S G++ E G+
Sbjct: 156 VHAPSSRR-TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 87 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 198
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEK 335
W+ L+ GV + D++S+G+VL E+ +L E Q + + NE+
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAE----------QPYQGLSNEQ 242
Query: 336 MKEGKLMEIVDQRLTDEGGI---DETQVRRLVDVAFWCIQERARLRPSMARVV 385
+ R EGG+ + L ++ C Q ++RPS ++
Sbjct: 243 V----------LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 93 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 204
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELT 305
W+ L+ GV + D++S+G+VL E+
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 80 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 139 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 191
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELT 305
W+ L+ GV + D++S+G+VL E+
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR 272
A ++A AL YLH+ +++ D+KPENILLD V++DFGL K + + + +T
Sbjct: 145 AAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFC 200
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT YLAPE + +Q D + G VL E+ G
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 115 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 174 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 226
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEK 335
W+ L+ GV + D++S+G+VL E+ +L E Q + + NE+
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAE----------QPYQGLSNEQ 270
Query: 336 MKEGKLMEIVDQRLTDEGGI---DETQVRRLVDVAFWCIQERARLRPSMARVV 385
+ R EGG+ + L ++ C Q ++RPS ++
Sbjct: 271 V----------LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 112
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 113 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 159
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
SR C GT YL PE I + EK D++S G++ E G+
Sbjct: 160 APSSRRXXLC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 114 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
SR C GT YL PE I + EK D++S G++ E G+
Sbjct: 161 APSSRRXXLC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G + + S+ E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT 115
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKL 259
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 116 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-- 160
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ SR + GT YL PE I + EK D++S G++ E G+
Sbjct: 161 VHAPSSRR-XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 106 QALLGHGSSASVF--KGILSDGTSVAVKRINGEENGEKEFRS----EVAAIASAQHVNLV 159
Q +LG GS V K ++ G AVK I+ + +K + EV + H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKA 219
+L + G YLV E G L I R SE + R+ V
Sbjct: 90 KLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA----------RIIRQVLSG 138
Query: 220 LSYLHNDCRSRVLHLDVKPENILL-----DENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++Y H +++++H D+KPEN+LL D N R + DFGLS + S+ GT
Sbjct: 139 ITYXH---KNKIVHRDLKPENLLLESKSKDANIRII--DFGLSTHF--EASKKXKDKIGT 191
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y+APE +L EKCD++S G++L L G
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 98 LEEATDNFQALLGHGSSASV---FKGILSDGTS--VAVKRI-NGEENGEKEFRSEVAAIA 151
EE + + LG G+ SV L D T VAVK++ + + +++F+ E+ +
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 152 SAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY 210
+ +V+ G PG P LV E++ +G L ++ R+
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL-------------------QRH 104
Query: 211 RVAIDVAKALSYLHNDCRS-------RVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD 263
R +D ++ L Y C+ R +H D+ NIL++ ++DFGL+KL+ D
Sbjct: 105 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 164
Query: 264 QSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + G + APE + + S + D++S+G+VL EL
Sbjct: 165 KDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 109 LGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFR--SEVAAIASAQHVNLVRLLGYC 165
LG G V + I D G VA+K+ E + + R E+ + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 166 -----VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI-DVAKA 219
+ P L E+ + G L R+ + C + R + D++ A
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDL--------RKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 220 LSYLHNDCRSRVLHLDVKPENILLDENYRAVVS---DFGLSKLMSRDQSRCITTIRGTRG 276
L YLH + R++H D+KPENI+L + ++ D G +K + DQ T GT
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 188
Query: 277 YLAPEWILEQGVSEKCDIYSYGMVLLELTGGRR 309
YLAPE + ++ + D +S+G + E G R
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 109 LGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFR--SEVAAIASAQHVNLVRLLGYC 165
LG G V + I D G VA+K+ E + + R E+ + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 166 -----VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI-DVAKA 219
+ P L E+ + G L R+ + C + R + D++ A
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDL--------RKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 220 LSYLHNDCRSRVLHLDVKPENILLDENYRAVVS---DFGLSKLMSRDQSRCITTIRGTRG 276
L YLH + R++H D+KPENI+L + ++ D G +K + DQ T GT
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 189
Query: 277 YLAPEWILEQGVSEKCDIYSYGMVLLELTGGRR 309
YLAPE + ++ + D +S+G + E G R
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 136
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 137 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 183
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
SR C GT YL PE I + EK D++S G++ E G+
Sbjct: 184 APSSRRDDLC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 111 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
SR C GT YL PE I + EK D++S G++ E G+
Sbjct: 158 APSSRRXXLC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ RV+H D+KPEN+LL ++DFG S
Sbjct: 114 AT----------YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
SR C GT YL PE I + EK D++S G++ E G+
Sbjct: 161 APSSRRDDLC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 109 LGHGS-SASVFKGILSDGTSVAVKRINGEENGEKE---FRSEVAAIASAQHVNLVRLLGY 164
+G GS ++ DG +K IN KE R EVA +A+ +H N+V+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE- 90
Query: 165 CVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLH 224
G Y+V ++ + G L I +++ L W + + AL ++H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDW------FVQICLALKHVH 142
Query: 225 NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWIL 284
+ ++LH D+K +NI L ++ + DFG++++++ I GT YL+PE
Sbjct: 143 D---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICE 198
Query: 285 EQGVSEKCDIYSYGMVLLEL 304
+ + K DI++ G VL EL
Sbjct: 199 NKPYNNKSDIWALGCVLYEL 218
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 28/171 (16%)
Query: 142 EFRSEVAAIASAQHVNLVRLLGYCVVPGG------PRYLVYEFIQNGSL---DHWIFPTS 192
+F++E+ I ++ YC+ G Y++YE+++N S+ D + F
Sbjct: 89 DFKNELQIITDIKN-------EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141
Query: 193 RRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVS 252
+ + ++ V + SY+HN+ + H DVKP NIL+D+N R +S
Sbjct: 142 KNYTCFIPIQVIKCIIK-----SVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLS 194
Query: 253 DFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSE--KCDIYSYGMVL 301
DFG S+ M + I RGT ++ PE+ + K DI+S G+ L
Sbjct: 195 DFGESEYMV---DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 66 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYA 123
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 124 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 239 QSDVWSFGVLMWEI 252
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 128 VAVKRINGEENG-EKE-FRSEVAAIAS-AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
VAVK + + EKE SE+ ++ QH N+V LLG C GGP ++ E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDL 137
Query: 185 DHWIFPTSRRSEGHYSGGCLSWDLRYR----VAIDVAKALSYLHNDCRSRVLHLDVKPEN 240
+++ SR E + + L R + VA+ +++L +H DV N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 194
Query: 241 ILLDENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGM 299
+LL + A + DFGL++ + D + + R ++APE I + + + D++SYG+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 300 VLLEL 304
+L E+
Sbjct: 255 LLWEI 259
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 50/293 (17%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ E + S ++A ++A +
Sbjct: 80 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N + E++ + DFG M+RD +G +G L
Sbjct: 139 AYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 191
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEK 335
W+ L+ GV + D++S+G+VL E+ +L E Q + + NE+
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAE----------QPYQGLSNEQ 235
Query: 336 MKEGKLMEIVDQRLTDEGGI---DETQVRRLVDVAFWCIQERARLRPSMARVV 385
+ R EGG+ + L+++ C Q ++RPS ++
Sbjct: 236 V----------LRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR 272
A +V AL YLH+ +++ D+KPENILLD+N ++DFG +K + +
Sbjct: 112 AAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLC 164
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNV--SLIEHGNDKSKNKWQYFPK 330
GT Y+APE + + ++ D +S+G+++ E+ G S +K N FP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224
Query: 331 IVNEKMKE 338
NE +K+
Sbjct: 225 FFNEDVKD 232
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 126 TSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFIQN 181
T VAVK + + EK+ ++ + +H N++ LLG C GP Y++ E+
Sbjct: 61 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASK 118
Query: 182 GSLDHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
G+L ++ +R G H LS A VA+ + YL + +H
Sbjct: 119 GNLREYL--QAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 173
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
D+ N+L+ E+ ++DFGL++ + D + T R ++APE + ++ + +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 293 DIYSYGMVLLEL 304
D++S+G++L E+
Sbjct: 234 DVWSFGVLLWEI 245
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 47/231 (20%)
Query: 97 ELEEATDNFQALLGHGSSASVFKG-ILSDGTSVAVKRINGEENG-EKEFRSEVAAIASAQ 154
E +E D + +LG G+ V+ G LS+ +A+K I ++ + E+A +
Sbjct: 20 EYDENGD--RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK 77
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYR--- 211
H N+V+ LG F +NG + ++ GG LS LR +
Sbjct: 78 HKNIVQYLG-------------SFSENGFIKIFM--------EQVPGGSLSALLRSKWGP 116
Query: 212 ----------VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV--VSDFGLSKL 259
+ + L YLH++ +++H D+K +N+L++ Y V +SDFG SK
Sbjct: 117 LKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKR 172
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILE--QGVSEKCDIYSYGMVLLELTGGR 308
++ + C T GT Y+APE I + +G + DI+S G ++E+ G+
Sbjct: 173 LA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 37/227 (16%)
Query: 98 LEEATDNFQAL--LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQH 155
+E D+F+ + LG G+ VFK + +G K E+ Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKPAIRNQI 51
Query: 156 VNLVRLLGYCVVP-----------GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
+ +++L C P G + E + GSLD + R E
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------- 103
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ 264
+ +V+I V K L+YL + +++H DVKP NIL++ + DFG+S +
Sbjct: 104 --QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 265 SRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNV 311
+ + GTR Y++PE + S + DI+S G+ L+E+ GR +
Sbjct: 160 A---NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 37/227 (16%)
Query: 98 LEEATDNFQAL--LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQH 155
+E D+F+ + LG G+ VFK + +G K E+ Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKPAIRNQI 51
Query: 156 VNLVRLLGYCVVP-----------GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
+ +++L C P G + E + GSLD + R E
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------- 103
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ 264
+ +V+I V K L+YL + +++H DVKP NIL++ + DFG+S +
Sbjct: 104 --QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 265 SRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNV 311
+ + GTR Y++PE + S + DI+S G+ L+E+ GR +
Sbjct: 160 A---NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
E + R EV + +H N++RL GY YL+ E+ G++ + S+ E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGY-FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-- 257
+ ++A ALSY H+ +V+H D+KPEN+LL ++DFG S
Sbjct: 111 AT----------YITELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 258 KLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
SR + C GT YL PE I + EK D++S G++ E G+
Sbjct: 158 APSSRRAALC-----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 174 LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
+ E + GSLD + R E ++ +V+I V + L+YL + +++H
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPE----------EILGKVSIAVLRGLAYLRE--KHQIMH 138
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCD 293
DVKP NIL++ + DFG+S + + GTR Y+APE + S + D
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMAPERLQGTHYSVQSD 195
Query: 294 IYSYGMVLLELTGGRRNVS 312
I+S G+ L+EL GR +
Sbjct: 196 IWSMGLSLVELAVGRYPIP 214
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 66 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYA 123
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 124 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTH 238
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 239 QSDVWSFGVLMWEI 252
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 47/231 (20%)
Query: 97 ELEEATDNFQALLGHGSSASVFKG-ILSDGTSVAVKRINGEEN-GEKEFRSEVAAIASAQ 154
E +E D + +LG G+ V+ G LS+ +A+K I ++ + E+A +
Sbjct: 6 EYDENGD--RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK 63
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYR--- 211
H N+V+ LG F +NG + ++ GG LS LR +
Sbjct: 64 HKNIVQYLG-------------SFSENGFIKIFM--------EQVPGGSLSALLRSKWGP 102
Query: 212 ----------VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV--VSDFGLSKL 259
+ + L YLH++ +++H D+K +N+L++ Y V +SDFG SK
Sbjct: 103 LKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKR 158
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILE--QGVSEKCDIYSYGMVLLELTGGR 308
++ + C T GT Y+APE I + +G + DI+S G ++E+ G+
Sbjct: 159 LA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 37/227 (16%)
Query: 98 LEEATDNFQAL--LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQH 155
+E D+F+ + LG G+ VFK + +G K E+ Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKPAIRNQI 51
Query: 156 VNLVRLLGYCVVP-----------GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
+ +++L C P G + E + GSLD + R E
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------- 103
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ 264
+ +V+I V K L+YL + +++H DVKP NIL++ + DFG+S +
Sbjct: 104 --QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 265 SRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNV 311
+ + GTR Y++PE + S + DI+S G+ L+E+ GR +
Sbjct: 160 A---NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 25/190 (13%)
Query: 125 GTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQ 180
G VAVK +N ++ + + + E+ + +H ++++L P ++V E++
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD-FFMVMEYVS 94
Query: 181 NGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPEN 240
G L +I R E + R R+ + A+ Y H R V+H D+KPEN
Sbjct: 95 GGELFDYICKHGRVEE---------MEAR-RLFQQILSAVDYCH---RHMVVHRDLKPEN 141
Query: 241 ILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI---LEQGVSEKCDIYSY 297
+LLD + A ++DFGLS +MS + G+ Y APE I L G + DI+S
Sbjct: 142 VLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPNYAAPEVISGRLYAG--PEVDIWSC 197
Query: 298 GMVLLELTGG 307
G++L L G
Sbjct: 198 GVILYALLCG 207
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 112 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYA 169
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 170 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 224
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 225 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 284
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 285 QSDVWSFGVLMWEI 298
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 39/252 (15%)
Query: 98 LEEATDNFQAL--LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQH 155
+E D+F+ + LG G+ VFK + +G K E+ Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKPAIRNQI 51
Query: 156 VNLVRLLGYCVVP-----------GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
+ +++L C P G + E + GSLD + R E
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------- 103
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ 264
+ +V+I V K L+YL + +++H DVKP NIL++ + DFG+S +
Sbjct: 104 --QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 265 SRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNK 324
+ + GTR Y++PE + S + DI+S G+ L+E+ GR + + D
Sbjct: 160 A---NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPM 216
Query: 325 --WQYFPKIVNE 334
++ IVNE
Sbjct: 217 AIFELLDYIVNE 228
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 37/227 (16%)
Query: 98 LEEATDNFQAL--LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQH 155
+E D+F+ + LG G+ VFK + +G K E+ Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKPAIRNQI 51
Query: 156 VNLVRLLGYCVVP-----------GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
+ +++L C P G + E + GSLD + R E
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------- 103
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ 264
+ +V+I V K L+YL + +++H DVKP NIL++ + DFG+S +
Sbjct: 104 --QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 265 SRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNV 311
+ + GTR Y++PE + S + DI+S G+ L+E+ GR +
Sbjct: 160 A---NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 30/190 (15%)
Query: 201 GGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM 260
G + D+ ++A+ + KAL +LH+ + V+H DVKP N+L++ + DFG+S +
Sbjct: 130 GQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYL 187
Query: 261 SRDQSRCITTIRGTRGYLAPEWI----LEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEH 316
D ++ I G + Y APE I ++G S K DI+S G+ +EL +++
Sbjct: 188 VDDVAKDIDA--GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL-------AILRF 238
Query: 317 GNDKSKNKWQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERAR 376
D +Q ++V E ++ + + E VD C+++ ++
Sbjct: 239 PYDSWGTPFQQLKQVVEEPSP-----QLPADKFSAE----------FVDFTSQCLKKNSK 283
Query: 377 LRPSMARVVE 386
RP+ + +
Sbjct: 284 ERPTYPELXQ 293
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 66 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQ-DGPLYVIVEYA 123
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 124 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 239 QSDVWSFGVLMWEI 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 28/198 (14%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 66 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYA 123
Query: 180 QNGSLDHWIFPTSRRSEGHYSGGCLSWDLR------------YRVAIDVAKALSYLHNDC 227
G+L ++ +RR G S+D+ +A+ + YL
Sbjct: 124 SKGNLREYL--RARRPPGMEX----SYDINRVPEEQMTFKDLVSCTYQLARGMEYL---A 174
Query: 228 RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQ 286
+ +H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++
Sbjct: 175 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDR 234
Query: 287 GVSEKCDIYSYGMVLLEL 304
+ + D++S+G+++ E+
Sbjct: 235 VYTHQSDVWSFGVLMWEI 252
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 124 DGTSVAVKRINGEENGE--KEFRSEVAAIAS-AQHVNLVRLLGYCVVPGGPRYLVYEFIQ 180
+ +VAVK + + E + SE+ + +H N++ LLG C GP Y++ E+
Sbjct: 66 EAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYAS 124
Query: 181 NGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
G+L ++ +RR G YS +++ +A+ + YL + +
Sbjct: 125 KGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCI 179
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSEK 291
H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ + +
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 292 CDIYSYGMVLLEL 304
D++S+G+++ E+
Sbjct: 240 SDVWSFGVLMWEI 252
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 107 ALLGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLG-- 163
A+LG G+ V K + D A+K+I E SEV +AS H +VR
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 164 ----------YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
V ++ E+ +N +L I H D +R+
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI---------HSENLNQQRDEYWRLF 122
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD---------- 263
+ +ALSY+H+ ++H ++KP NI +DE+ + DFGL+K + R
Sbjct: 123 RQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 264 ---QSRCITTIRGTRGYLAPEWILEQG-VSEKCDIYSYGMVLLE 303
S +T+ GT Y+A E + G +EK D YS G++ E
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 37/228 (16%)
Query: 94 RSKELEEATDNFQAL--LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIA 151
+ K E D+F+ + LG G+ VFK + +G K E+
Sbjct: 16 KQKVGELKDDDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKPAI 66
Query: 152 SAQHVNLVRLLGYCVVP-----------GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYS 200
Q + +++L C P G + E + GSLD + R E
Sbjct: 67 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---- 122
Query: 201 GGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM 260
+ +V+I V K L+YL + +++H DVKP NIL++ + DFG+S +
Sbjct: 123 ------QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 174
Query: 261 SRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+ + GTR Y++PE + S + DI+S G+ L+E+ GR
Sbjct: 175 IDSMA---NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 98/194 (50%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 53 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYA 110
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL + +
Sbjct: 111 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKC 165
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 166 IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 225
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 226 QSDVWSFGVLMWEI 239
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 174 LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
+ E + GSLD + R E + +V+I V K L+YL + +++H
Sbjct: 108 ICMEHMDGGSLDQVLKKAGRIPE----------QILGKVSIAVIKGLTYLRE--KHKIMH 155
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCD 293
DVKP NIL++ + DFG+S + + + GTR Y++PE + S + D
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSD 212
Query: 294 IYSYGMVLLELTGGRRNVS 312
I+S G+ L+E+ GR +
Sbjct: 213 IWSMGLSLVEMAVGRYPIP 231
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 98/242 (40%), Gaps = 41/242 (16%)
Query: 103 DNFQAL--LGHGSSASVFKGILS--DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQ 154
+FQ L LGHGS VFK + S DG AVKR G K+ ++A + S Q
Sbjct: 57 QSFQRLSRLGHGSYGEVFK-VRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H VRL GG YL E H C +W A
Sbjct: 116 HPCCVRL-EQAWEEGGILYLQTELCGPSLQQH----------------CEAWGASLPEAQ 158
Query: 215 ------DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
D AL++LH+ ++HLDVKP NI L R + DFGL L+ +
Sbjct: 159 VWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAG 213
Query: 269 TTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYF 328
G Y+APE +L+ D++S G+ +LE+ N+ L G + + Y
Sbjct: 214 EVQEGDPRYMAPE-LLQGSYGTAADVFSLGLTILEVAC---NMELPHGGEGWQQLRQGYL 269
Query: 329 PK 330
P
Sbjct: 270 PP 271
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 17/139 (12%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
+LV E + G L I + + H+S S+ +R V+ A+S++H+ V+
Sbjct: 82 FLVMELLNGGELFERI-----KKKKHFSETEASYIMRKLVS-----AVSHMHD---VGVV 128
Query: 233 HLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVS 289
H D+KPEN+L ++N + DFG ++L D ++ + T T Y APE + + G
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQPLKTPCFTLHYAAPELLNQNGYD 187
Query: 290 EKCDIYSYGMVLLELTGGR 308
E CD++S G++L + G+
Sbjct: 188 ESCDLWSLGVILYTMLSGQ 206
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 58 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYA 115
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 116 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 170
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 171 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 230
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 231 QSDVWSFGVLMWEI 244
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 66 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQ-DGPLYVIVEYA 123
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 124 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 239 QSDVWSFGVLMWEI 252
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ A H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH- 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 123
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 66 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYA 123
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 124 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 179 IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 239 QSDVWSFGVLMWEI 252
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 174 LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
+ E + GSLD + R E + +V+I V K L+YL + +++H
Sbjct: 143 ICMEHMDGGSLDQVLKKAGRIPE----------QILGKVSIAVIKGLTYLRE--KHKIMH 190
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCD 293
DVKP NIL++ + DFG+S + + GTR Y++PE + S + D
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSD 247
Query: 294 IYSYGMVLLELTGGRRNVS 312
I+S G+ L+E+ GR +
Sbjct: 248 IWSMGLSLVEMAVGRYPIP 266
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ E+
Sbjct: 55 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYA 112
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 113 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 167
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 168 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 227
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 228 QSDVWSFGVLMWEI 241
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 112 GSSASVFKG-ILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGG 170
G V+K +++D +V + + +++ + E E+ + +H NL++ +
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSE--REIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 171 PR---YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHND- 226
+L+ F GSL ++ G ++W+ VA +++ LSYLH D
Sbjct: 84 LEVELWLITAFHDKGSLTDYL-----------KGNIITWNELCHVAETMSRGLSYLHEDV 132
Query: 227 --CRSR-----VLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTRGYL 278
CR + H D K +N+LL + AV++DFGL+ + T + GTR Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 279 APEWILEQGVS------EKCDIYSYGMVLLEL 304
APE +LE ++ + D+Y+ G+VL EL
Sbjct: 193 APE-VLEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 174 LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLH 233
+ E + GSLD + R E + +V+I V K L+YL + +++H
Sbjct: 84 ICMEHMDGGSLDQVLKKAGRIPE----------QILGKVSIAVIKGLTYLRE--KHKIMH 131
Query: 234 LDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCD 293
DVKP NIL++ + DFG+S + + + GTR Y++PE + S + D
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA---NEFVGTRSYMSPERLQGTHYSVQSD 188
Query: 294 IYSYGMVLLELTGGR 308
I+S G+ L+E+ GR
Sbjct: 189 IWSMGLSLVEMAVGR 203
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 28/153 (18%)
Query: 168 PGGPRYLVY---EFIQNGSLDHWIFPTSRRS--EGHYSGGCLSWDLRYRVAIDVAKALSY 222
P P+ +Y + + +L W+ +RR E G CL + I +A+A+ +
Sbjct: 129 PSSPKVYLYIQMQLCRKENLKDWM---NRRCSLEDREHGVCL------HIFIQIAEAVEF 179
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR--CITTIR-------- 272
LH+ ++H D+KP NI + V DFGL M +D+ +T +
Sbjct: 180 LHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ 236
Query: 273 -GTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
GT+ Y++PE I S K DI+S G++L EL
Sbjct: 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 104 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 150
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+DE V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 205
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 206 VDWWALGVLIYEMAAG 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
+ D+KPEN+L+D+ V+DFG +K R + R T+ GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRT-WTLCGTPEYLAPEIILSKGYNKAV 220
Query: 293 DIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 221 DWWALGVLIYEMAAG 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 128/293 (43%), Gaps = 50/293 (17%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ + S ++A ++A +
Sbjct: 83 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 142 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 194
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEK 335
W+ L+ GV + D++S+G+VL E+ +L E Q + + NE+
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAE----------QPYQGLSNEQ 238
Query: 336 MKEGKLMEIVDQRLTDEGGI---DETQVRRLVDVAFWCIQERARLRPSMARVV 385
+ R EGG+ + L ++ C Q ++RPS ++
Sbjct: 239 V----------LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 103 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 149
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
+ D+KPEN+L+D+ V+DFG +K R + R T+ GT YLAPE IL +G ++
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRT-WTLCGTPEYLAPEIILSKGYNKAV 205
Query: 293 DIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 206 DWWALGVLIYEMAAG 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G++ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 154 QHVNLVRL--LGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYR 211
Q VN L L Y Y+V E++ G + + R SE H R+
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFY 146
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITT 270
A + YLH+ +++ D+KPEN+L+D+ V+DFG +K + R C
Sbjct: 147 AA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--- 199
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT YLAPE IL +G ++ D ++ G+++ E+ G
Sbjct: 200 --GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 154 QHVNLVRL--LGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYR 211
Q VN L L Y Y+V E++ G + + R SE H R+
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFY 146
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITT 270
A + YLH+ +++ D+KPEN+L+D+ V+DFG +K + R C
Sbjct: 147 AA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--- 199
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT YLAPE IL +G ++ D ++ G+++ E+ G
Sbjct: 200 --GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 128 VAVKRINGEENG-EKE-FRSEVAAIAS-AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
VAVK + + EKE SE+ ++ QH N+V LLG C GGP ++ E+ G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDL 129
Query: 185 DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD 244
+++ + G L + VA+ +++L +H DV N+LL
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 186
Query: 245 ENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ A + DFGL++ + D + + R ++APE I + + + D++SYG++L E
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 304 L 304
+
Sbjct: 247 I 247
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 85 LLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 133
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 188
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 53 IIRRRYHKRRLLLESKFVTEGRELRIEYSFLRKVAGVPIKFRSKELEEATDNFQALLGHG 112
I+R+R RRLL E + V L P + + L+E +LG G
Sbjct: 12 IVRKR-TLRRLLQERELVEP----------LTPSGEAPNQALLRILKETEFKKIKVLGSG 60
Query: 113 SSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
+ +V+KG+ + +G V + R KE E +AS + ++ RLLG C
Sbjct: 61 AFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC 120
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
+ L+ + + G L ++ Y L+W + +AK ++YL +
Sbjct: 121 LT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGMNYLED 169
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GYLAPEW 282
R++H D+ N+L+ ++DFGL+KL+ ++ G + ++A E
Sbjct: 170 ---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALES 224
Query: 283 ILEQGVSEKCDIYSYGMVLLEL 304
IL + + + D++SYG+ + EL
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWEL 246
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 154 QHVNLVRL--LGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYR 211
Q VN L L Y Y+V E++ G + + R SE H R+
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFY 146
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITT 270
A + YLH+ +++ D+KPEN+L+D+ V+DFG +K + R C
Sbjct: 147 AA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--- 199
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT YLAPE IL +G ++ D ++ G+++ E+ G
Sbjct: 200 --GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 128 VAVKRINGEENG-EKE-FRSEVAAIAS-AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
VAVK + + EKE SE+ ++ QH N+V LLG C GGP ++ E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDL 137
Query: 185 DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD 244
+++ + G L + VA+ +++L +H DV N+LL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 194
Query: 245 ENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ A + DFGL++ + D + + R ++APE I + + + D++SYG++L E
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 304 L 304
+
Sbjct: 255 I 255
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDG----TSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G VA+K + KE E +AS + ++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 82 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 130
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 185
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 83 LLGICLT--STVQLIMQLMPFGXLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 131
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 132 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 186
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWEL 213
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
++E + +H +V L+ Y GG YL+ E++ G L F R G
Sbjct: 69 KAERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGEL----FMQLERE------GI 117
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD 263
D +++ AL +LH + +++ D+KPENI+L+ ++DFGL K D
Sbjct: 118 FMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174
Query: 264 QSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ T GT Y+APE ++ G + D +S G ++ ++ G
Sbjct: 175 GT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 83 LLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 131
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 132 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 186
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWEL 213
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 128/293 (43%), Gaps = 50/293 (17%)
Query: 109 LGHGSSASVF----KGILSDG--TSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVR 160
LG GS V+ KG++ D T VA+K +N + + EF +E + + ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG V G P ++ E + G L ++ + S ++A ++A +
Sbjct: 93 LLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL+ + + +H D+ N ++ E++ + DFG M+RD +G +G L
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 204
Query: 281 EWI----LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEK 335
W+ L+ GV + D++S+G+VL E+ +L E Q + + NE+
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAE----------QPYQGLSNEQ 248
Query: 336 MKEGKLMEIVDQRLTDEGGI---DETQVRRLVDVAFWCIQERARLRPSMARVV 385
+ R EGG+ + L ++ C Q ++RPS ++
Sbjct: 249 V----------LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 92 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 140
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 141 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 195
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWEL 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 86 LLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 134
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 135 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 189
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWEL 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 82 LLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 130
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 185
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 84 LLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 132
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 187
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDG----TSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G VA+K + KE E +AS + ++ R
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 85 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 133
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 188
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDG----TSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G VA+K + KE E +AS + ++ R
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 89 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 137
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 192
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDG----TSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G VA+K + KE E +AS + ++ R
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 85 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 133
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 188
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDG----TSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G VA+K + KE E +AS + ++ R
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 85 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 133
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 188
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDG----TSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G VA+K + KE E +AS + ++ R
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 76 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 124
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 125 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 179
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWEL 206
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 82 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 130
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 185
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 138 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 184
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
+ D+KPEN+L+D+ V+DFG +K + T+ GT YLAPE IL +G ++
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLAPEIILSKGYNKAV 240
Query: 293 DIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 241 DWWALGVLIYEMAAG 255
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDG----TSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G VA+K + KE E +AS + ++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 82 LLGICLT--STVQLITQLMPFGXLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 130
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 185
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 128 VAVKRINGEENG-EKE-FRSEVAAIAS-AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
VAVK + + EKE SE+ ++ QH N+V LLG C GGP ++ E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDL 137
Query: 185 DHWIFPTSRRSEGHYSGGCLSWDLRYR----VAIDVAKALSYLHNDCRSRVLHLDVKPEN 240
+++ SR E + + R + VA+ +++L +H DV N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 194
Query: 241 ILLDENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGM 299
+LL + A + DFGL++ + D + + R ++APE I + + + D++SYG+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 300 VLLEL 304
+L E+
Sbjct: 255 LLWEI 259
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDVAKALSYL 223
G + +VY N LD ++ T R HYS + + Y + ++L+Y+
Sbjct: 83 YSSGEKKDVVY---LNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R Y APE
Sbjct: 139 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSRYYRAPEL 193
Query: 283 IL-EQGVSEKCDIYSYGMVLLELTGGR 308
I + D++S G VL EL G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 84 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 132
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 187
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 107 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 155
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 156 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 210
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWEL 237
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+A+S+LH + ++H D+KPENILLD+N + +SDFG S + + + + GT GY
Sbjct: 211 EAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGY 265
Query: 278 LAPEWI------LEQGVSEKCDIYSYGMVLLELTGG 307
LAPE + G ++ D+++ G++L L G
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 88 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 136
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 137 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 191
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWEL 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 25/190 (13%)
Query: 125 GTSVAVKRINGEENGE--KEFRSEVAAIASAQHVNLVRLLGYCVVPGGPR-YLVYEFIQN 181
G VA+K ++ G ++E+ A+ + +H ++ +L Y V+ + ++V E+
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL--YHVLETANKIFMVLEYCPG 92
Query: 182 GSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI-DVAKALSYLHNDCRSRVLHLDVKPEN 240
G L +I R SE RV + A++Y+H+ + H D+KPEN
Sbjct: 93 GELFDYIISQDRLSEE-----------ETRVVFRQIVSAVAYVHSQGYA---HRDLKPEN 138
Query: 241 ILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVS---EKCDIYSY 297
+L DE ++ + DFGL ++ + T G+ Y APE I QG S + D++S
Sbjct: 139 LLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI--QGKSYLGSEADVWSM 196
Query: 298 GMVLLELTGG 307
G++L L G
Sbjct: 197 GILLYVLMCG 206
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 21/225 (9%)
Query: 96 KELEEATDNFQALLGHGSSASVFKGIL------SDGTSVAVKRINGEENGE--KEFRSEV 147
KE+ + F LG V+KG L +VA+K + + G +EFR E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 148 AAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYS------- 200
A QH N+V LLG V P +++ + +G L ++ S S+ +
Sbjct: 81 MLRARLQHPNVVCLLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 201 GGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-L 259
D + VA +A + YL + V+H D+ N+L+ + +SD GL + +
Sbjct: 140 SALEPPDFVHLVA-QIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ D + + ++APE I+ S DI+SYG+VL E+
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
+ D+KPEN+L+D+ V+DFG +K R + R + GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRT-WXLXGTPEYLAPEIILSKGYNKAV 219
Query: 293 DIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 27/228 (11%)
Query: 96 KELEEATDNFQALLGHGSSASVFKGIL------SDGTSVAVKRINGEENGE--KEFRSEV 147
KE+ + F LG V+KG L +VA+K + + G +EFR E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 148 AAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
A QH N+V LLG V P +++ + +G L ++ S S+ G D
Sbjct: 64 MLRARLQHPNVVCLLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV----GSTDDD 118
Query: 208 LRYRVAID----------VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS 257
+ A++ +A + YL + V+H D+ N+L+ + +SD GL
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 258 K-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + + D + + ++APE I+ S DI+SYG+VL E+
Sbjct: 176 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 138 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 184
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 239
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 240 VDWWALGVLIYEMAAG 255
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 109 LGHGSSASVFKG------ILSDGTSVAVKRINGEE-NGEKEFRSEVAAIASAQHVNLVRL 161
LG G+ VF D VAVK + K+F+ E + + QH ++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 162 LGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRS------EGHYSGGCLSWDLRYRVAID 215
G C G P +V+E++++G L+ ++ + + + G L +A
Sbjct: 83 YGVC-GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGT 274
+A + YL +H D+ N L+ N + DFG+S+ + S D R
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE I+ + + + D++S+G++L E+
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH- 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 123
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 125 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 180
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 181 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 233
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 234 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 115 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 170
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 171 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 223
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 224 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLS 205
E++ + +H ++++L P +V E+ G L +I R +E
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTD-IVMVIEY-AGGELFDYIVEKKRMTE--------- 107
Query: 206 WDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQS 265
D R + A+ Y H R +++H D+KPEN+LLD+N ++DFGLS +M+
Sbjct: 108 -DEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DG 161
Query: 266 RCITTIRGTRGYLAPEWI---LEQGVSEKCDIYSYGMVLLELTGGR 308
+ T G+ Y APE I L G + D++S G+VL + GR
Sbjct: 162 NFLKTSCGSPNYAAPEVINGKLYAG--PEVDVWSCGIVLYVMLVGR 205
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
+ D+KPEN+L+D+ V+DFG +K R + R + GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRT-WXLAGTPEYLAPEIILSKGYNKAV 219
Query: 293 DIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVRLLGYCV 166
LG G+ V+K + + +A ++ ++ E+ ++ E+ +AS H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSRR-SEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
+++ EF G++D + R +E C + +D AL+YLH+
Sbjct: 105 YENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVC-------KQTLD---ALNYLHD 153
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWIL- 284
+ +++H D+K NIL + ++DFG+S +R R + I GT ++APE ++
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMC 209
Query: 285 ----EQGVSEKCDIYSYGMVLLEL 304
++ K D++S G+ L+E+
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 105 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 160
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 161 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 213
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 214 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 154
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 207
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 24/201 (11%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G V+ + T VAVK + + F +E + + QH LV+L + VV
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVT 247
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCR 228
P Y++ EF+ GSL ++ + EG D + +A+ ++++ +
Sbjct: 248 KEPIYIITEFMAKGSLLDFL----KSDEGSKQPLPKLIDF----SAQIAEGMAFIE---Q 296
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGV 288
+H D++ NIL+ + ++DFGL+++ ++ + + APE I
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK----------WTAPEAINFGSF 346
Query: 289 SEKCDIYSYGMVLLEL-TGGR 308
+ K D++S+G++L+E+ T GR
Sbjct: 347 TIKSDVWSFGILLMEIVTYGR 367
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVRLLGYCV 166
LG G+ V+K + + +A ++ ++ E+ ++ E+ +AS H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSRR-SEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
+++ EF G++D + R +E C + +D AL+YLH+
Sbjct: 105 YENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVC-------KQTLD---ALNYLHD 153
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWIL- 284
+ +++H D+K NIL + ++DFG+S +R R + I GT ++APE ++
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMC 209
Query: 285 ----EQGVSEKCDIYSYGMVLLEL 304
++ K D++S G+ L+E+
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 154
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 207
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 110 YMVMEYVPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 156
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 211
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 212 VDWWALGVLIYEMAAG 227
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 123
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 98 CIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 153
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 206
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 98 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 153
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 206
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 123
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 71
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 121
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 122 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ +
Sbjct: 66 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVAYA 123
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 124 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 239 QSDVWSFGVLMWEI 252
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 109 LGHGSSASVFKG-ILSDGTSVAVKRINGEENGEKEFRS----EVAAIASAQHVNLVRLLG 163
+G G + V++ L DG VA+K++ + + + R+ E+ + H N+++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWI--FPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
+ +V E G L I F +R + ++ + + AL
Sbjct: 100 -SFIEDNELNIVLELADAGDLSRMIKHFKKQKR--------LIPERTVWKYFVQLCSALE 150
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
++H+ RV+H D+KP N+ + + D GL + S ++ ++ GT Y++PE
Sbjct: 151 HMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPE 206
Query: 282 WILEQGVSEKCDIYSYGMVLLELTG 306
I E G + K DI+S G +L E+
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 113 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 168
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 221
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 90 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 145
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 146 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 198
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 199 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH- 72
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 113 CIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 168
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 221
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYMPGGDMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYMPGGDMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+ + YLHN+ RV+H D+K N+ L+++ + DFGL+ + D R T+ GT Y
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKTLCGTPNY 208
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+APE + ++G S + DI+S G +L L G+
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVRLLGYCV 166
LG G+ V+K + + +A ++ ++ E+ ++ E+ +AS H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSRR-SEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
+++ EF G++D + R +E C + +D AL+YLH+
Sbjct: 105 YENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVC-------KQTLD---ALNYLHD 153
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWIL- 284
+ +++H D+K NIL + ++DFG+S +R R I GT ++APE ++
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMC 209
Query: 285 ----EQGVSEKCDIYSYGMVLLEL 304
++ K D++S G+ L+E+
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 78
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 79 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSR 186
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 78
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 79 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSR 186
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 79
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 80 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 133 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSR 187
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRING--EENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 113 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 168
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAM 221
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 116 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 171
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 172 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAGYYRKGGCAM 224
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 225 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R +E H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFAEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 97
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 98 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 151 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSR 205
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDG----TSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G VA+K + KE E +AS + ++ R
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +A+ +
Sbjct: 79 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAEGM 127
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 128 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 182
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWEL 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 123
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 123
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 109 LGHGSSASV---FKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
LG G+ V + + +V + + + + + E+ H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +YL E+ G L I P E R + + YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG 123
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWIL 284
+ H D+KPEN+LLDE +SDFGL+ + ++ R + + GT Y+APE +
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 285 EQGV-SEKCDIYSYGMVLLELTGG 307
+ +E D++S G+VL + G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E+ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+++D+ V+DFGL+K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 139 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 194
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M+RD R +G
Sbjct: 195 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAGYYRKGGCAM 247
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 20/194 (10%)
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIAS----AQHVNLVRLLGYCVVPGGPRYLVYEFI 179
+ +VAVK + ++ EK+ V+ + +H N++ LLG C GP Y++ +
Sbjct: 66 EAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVGYA 123
Query: 180 QNGSLDHWIFPTSRRSEG-HYSGGC-------LSWDLRYRVAIDVAKALSYLHNDCRSRV 231
G+L ++ +RR G YS +++ +A+ + YL +
Sbjct: 124 SKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSR-DQSRCITTIRGTRGYLAPEWILEQGVSE 290
+H D+ N+L+ EN ++DFGL++ ++ D + T R ++APE + ++ +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 291 KCDIYSYGMVLLEL 304
+ D++S+G+++ E+
Sbjct: 239 QSDVWSFGVLMWEI 252
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 86
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 87 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 140 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSR 194
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 78
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 79 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 186
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E+ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+++D+ V+DFGL+K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 90
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 91 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 144 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSR 198
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ ++ G
Sbjct: 219 VDWWALGVLIYQMAAG 234
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 82
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 83 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 135
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 136 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSR 190
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 102 TDNF--QALLGHGSSASVFKGIL-SDGTSVAVKRINGEENGEKEFRS---EVAAIASAQH 155
+DN+ + LG G+ + V + + + G A K IN ++ ++F+ E QH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
N+VRL + YLV++ + G L I SE S C+
Sbjct: 64 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-CIQ---------Q 112
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIR 272
+ ++++Y H++ ++H ++KPEN+LL + ++DFGL+ + + S
Sbjct: 113 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFA 167
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + + S+ DI++ G++L L G
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 102 TDNF--QALLGHGSSASVFKGIL-SDGTSVAVKRINGEENGEKEFRS---EVAAIASAQH 155
+DN+ + LG G+ + V + + + G A K IN ++ ++F+ E QH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
N+VRL + YLV++ + G L I SE S C+
Sbjct: 65 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-CIQ---------Q 113
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIR 272
+ ++++Y H++ ++H ++KPEN+LL + ++DFGL+ + + S
Sbjct: 114 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFA 168
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + + S+ DI++ G++L L G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 91
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 92 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 144
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 145 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 199
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 90
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 91 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 144 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSR 198
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 144 RSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
++E + +H +V L+ Y GG YL+ E++ G L F R G
Sbjct: 69 KAERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGEL----FMQLERE------GI 117
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD 263
D +++ AL +LH + +++ D+KPENI+L+ ++DFGL K D
Sbjct: 118 FMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174
Query: 264 QSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ GT Y+APE ++ G + D +S G ++ ++ G
Sbjct: 175 GT-VTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 20/219 (9%)
Query: 93 FRSKELEEATDNFQALLGHGSSASVFKGILSDGTSV-AVKRIN--GEENGEKEFRSEVAA 149
F+S + EE + + G GS VFKGI + V A+K I+ E+ ++ + E+
Sbjct: 20 FQSMDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 150 IASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR 209
++ + + G + +++ E++ GS + P G L
Sbjct: 79 LSQCDSPYVTKYYG-SYLKDTKLWIIMEYLGGGSALDLLEP-----------GPLDETQI 126
Query: 210 YRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT 269
+ ++ K L YLH++ + +H D+K N+LL E+ ++DFG++ ++ Q +
Sbjct: 127 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-N 182
Query: 270 TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
T GT ++APE I + K DI+S G+ +EL G
Sbjct: 183 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 102 TDNF--QALLGHGSSASVFKGIL-SDGTSVAVKRINGEENGEKEFRS---EVAAIASAQH 155
+DN+ + LG G+ + V + + + G A K IN ++ ++F+ E QH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
N+VRL + YLV++ + G L I SE S C+
Sbjct: 65 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-CIQ---------Q 113
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIR 272
+ ++++Y H++ ++H ++KPEN+LL + ++DFGL+ + + S
Sbjct: 114 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFA 168
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + + S+ DI++ G++L L G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 35/219 (15%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVKRINGEENGEKE--FRSEVAAIASAQ-HVNLVRLLG 163
LLG G+ A V + L +G AVK I + + FR EV + Q + N++ L+
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFR-EVETLYQCQGNKNILELIE 78
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
+ YLV+E +Q GS+ I +E S RV DVA AL +L
Sbjct: 79 F-FEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS----------RVVRDVAAALDFL 127
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRC-------ITTIRG 273
H + H D+KPENIL + + + DF L M + S C +TT G
Sbjct: 128 HT---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNS-CTPITTPELTTPCG 183
Query: 274 TRGYLAPEWI---LEQGV--SEKCDIYSYGMVLLELTGG 307
+ Y+APE + +Q ++CD++S G+VL + G
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 128 VAVKRINGEENG-EKE-FRSEVAAIAS-AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
VAVK + + EKE SE+ ++ QH N+V LLG C GGP ++ E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH-GGPVLVITEYCCYGDL 137
Query: 185 DHWIFPTSRRSEG--------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDV 236
+ F +R G H LS + VA+ +++L +H DV
Sbjct: 138 LN--FLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDV 192
Query: 237 KPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAPEWILEQGVSEKCDIY 295
N+LL + A + DFGL++ + D + + R ++APE I + + + D++
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 252
Query: 296 SYGMVLLEL 304
SYG++L E+
Sbjct: 253 SYGILLWEI 261
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 127 SVAVKRINGEE--NGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
+VAVK ++ + + + + E+ H N+V+ G+ G +YL E+ G L
Sbjct: 34 AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL 92
Query: 185 DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD 244
I P E R + + YLH + H D+KPEN+LLD
Sbjct: 93 FDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 139
Query: 245 ENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWILEQGV-SEKCDIYSYGMVLL 302
E +SDFGL+ + ++ R + + GT Y+APE + + +E D++S G+VL
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 303 ELTGG 307
+ G
Sbjct: 200 AMLAG 204
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 19/122 (15%)
Query: 199 YSGGCLSWDLRYRVAID----------VAKALSYLHNDCRSRVLHLDVKPENILLDENYR 248
Y GG L ++ +R+ + V ++YLH + ++H D+KPEN+LL+ +
Sbjct: 118 YKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEK 174
Query: 249 AV---VSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELT 305
+ DFGLS + + + + GT Y+APE +L + EKCD++S G++L L
Sbjct: 175 DALIKIVDFGLSAVF--ENQKKMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILL 231
Query: 306 GG 307
G
Sbjct: 232 AG 233
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 127 SVAVKRINGEE--NGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
+VAVK ++ + + + + E+ H N+V+ G+ G +YL E+ G L
Sbjct: 33 AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL 91
Query: 185 DHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD 244
I P E R + + YLH + H D+KPEN+LLD
Sbjct: 92 FDRIEPDIGMPEPDAQ----------RFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 245 ENYRAVVSDFGLSKLMS-RDQSRCITTIRGTRGYLAPEWILEQGV-SEKCDIYSYGMVLL 302
E +SDFGL+ + ++ R + + GT Y+APE + + +E D++S G+VL
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 303 ELTGG 307
+ G
Sbjct: 199 AMLAG 203
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R E H R+ A + YLH+ ++
Sbjct: 138 YMVMEYVAGGEMFSHLRRIGRFXEPH---------ARFYAA-QIVLTFEYLHS---LDLI 184
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 239
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 240 VDWWALGVLIYEMAAG 255
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R E H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFXEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDG----TSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
+L G+ +V+KG+ + +G VA+K + KE E +AS + ++ R
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 89 LLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 137
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 192
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R E H R+ A + YLH+ ++
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFXEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R E H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFXEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 31/213 (14%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCV 166
++G+GS V++ L D G VA+K++ G+ E+ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRELQIMRKLDHCNIVRL----- 78
Query: 167 VPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDVA 217
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 79 -----RYFFYSSGEKKDEVYLNLVLD-YVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTRG 276
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSRY 187
Query: 277 YLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E+ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVLEYAPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R E H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFXEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R E H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFXEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 104 NFQALLGHGS-----SASVFKGILSDGT-SVAVKRINGEEN-GEKE-FRSEVAAIAS-AQ 154
+F LG G+ A+ + I SD +VAVK + + E+E SE+ ++
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWI------FPTSRRSEG--HYSGGCLSW 206
H+N+V LLG C + GGP ++ E+ G L +++ F S+ S L
Sbjct: 109 HMNIVNLLGACTI-GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
+ + VAK +++L +H D+ NILL + DFGL++ + D +
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 267 CIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ R ++APE I + + D++SYG+ L EL
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R E H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFXEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 104 NFQALLGHGS-----SASVFKGILSDGT-SVAVKRINGEEN-GEKE-FRSEVAAIAS-AQ 154
+F LG G+ A+ + I SD +VAVK + + E+E SE+ ++
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWI------FPTSRRSEG--HYSGGCLSW 206
H+N+V LLG C + GGP ++ E+ G L +++ F S+ S L
Sbjct: 102 HMNIVNLLGACTI-GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
+ + VAK +++L + +H D+ NILL + DFGL++ + D +
Sbjct: 161 EDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 267 CIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ R ++APE I + + D++SYG+ L EL
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+++D+ V+DFG +K + R C GT YLAPE I+ +G ++
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIISKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 86 LLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 134
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFG +KL+ ++ G + +
Sbjct: 135 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKW 189
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWEL 216
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 139 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 130 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 109 LGHGSSASVFKGILS------DGTSVAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVR 160
LGHG+ V++G +S VAVK + E E +F E I+ H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
+G + PR+++ E + G L ++ T R S L DL + VA D+A
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLH-VARDIACGC 154
Query: 221 SYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG- 276
YL + +H D+ N LL A + DFG M++D R +G
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG----MAQDIYRASYYRKGGCAM 207
Query: 277 ----YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
++ PE +E + K D +S+G++L E+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT 270
++ + KAL++L + + ++H D+KP NILLD + + DFG+S + ++ T
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TR 184
Query: 271 IRGTRGYLAPEWI----LEQGVSEKCDIYSYGMVLLELTGGR 308
G R Y+APE I QG + D++S G+ L EL GR
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 14/119 (11%)
Query: 199 YSGGCLSWDL-------RYRVAI---DVAKALSYLHNDCRSRVLHLDVKPENILLDENYR 248
Y GG + DL +++A ++ K L YLH++ + +H D+K N+LL E
Sbjct: 102 YLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGD 158
Query: 249 AVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++DFG++ ++ Q + T GT ++APE I + K DI+S G+ +EL G
Sbjct: 159 VKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 141 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 104 NFQALLGHGS-----SASVFKGILSDGT-SVAVKRINGEEN-GEKE-FRSEVAAIAS-AQ 154
+F LG G+ A+ + I SD +VAVK + + E+E SE+ ++
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWI------FPTSRRSEG--HYSGGCLSW 206
H+N+V LLG C + GGP ++ E+ G L +++ F S+ S L
Sbjct: 86 HMNIVNLLGACTI-GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
+ + VAK +++L + +H D+ NILL + DFGL++ + D +
Sbjct: 145 EDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 267 CIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ R ++APE I + + D++SYG+ L EL
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +T
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R E H R+ A + YLH+ ++
Sbjct: 112 YMVMEYVAGGEMFSHLRRIGRFXEPH---------ARFYAA-QIVLTFEYLHS---LDLI 158
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 213
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 214 VDWWALGVLIYEMAAG 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCV 166
++G+GS V++ L D G VA+K++ G+ E+ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRELQIMRKLDHCNIVRL----- 78
Query: 167 VPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDVA 217
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 79 -----RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTRG 276
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 187
Query: 277 YLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 112
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 113 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + ++ I +R
Sbjct: 166 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSXI-CSR 220
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R E H R+ A + YLH+ ++
Sbjct: 110 YMVMEYVPGGEMFSHLRRIGRFXEPH---------ARFYAA-QIVLTFEYLHS---LDLI 156
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 211
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 212 VDWWALGVLIYEMAAG 227
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 84 LLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 132
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFG +KL+ ++ G + +
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKW 187
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 89 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 137
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFG +KL+ ++ G + +
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKW 192
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+L G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 89 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 137
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 192
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 30/191 (15%)
Query: 125 GTSVAVKRI-NGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNG 182
G VAVK++ + + +++F+ E+ + + +V+ G PG LV E++ +G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 183 SLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRS-------RVLHLD 235
L ++ R+R +D ++ L Y C+ R +H D
Sbjct: 99 CLRDFL-------------------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 139
Query: 236 VKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCD 293
+ NIL++ ++DFGL+KL+ D+ + G + APE + + S + D
Sbjct: 140 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 199
Query: 294 IYSYGMVLLEL 304
++S+G+VL EL
Sbjct: 200 VWSFGVVLYEL 210
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 103 DNFQALLGH-GSSASVFKGILSDGTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLV 159
++F ++G G V+K + + +A ++ ++ E+ ++ E+ +AS H N+V
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRR-SEGHYSGGCLSWDLRYRVAIDVAK 218
+LL +++ EF G++D + R +E C + +D
Sbjct: 71 KLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVC-------KQTLD--- 119
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
AL+YLH++ +++H D+K NIL + ++DFG+S +R + + GT ++
Sbjct: 120 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWM 176
Query: 279 APEWIL-----EQGVSEKCDIYSYGMVLLEL 304
APE ++ ++ K D++S G+ L+E+
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 106
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 107 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 159
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 160 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 214
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 84 LLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 132
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFG +KL+ ++ G + +
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKW 187
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 83
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 84 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 136
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 137 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 191
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 104 NFQALLGHGS-----SASVFKGILSDGT-SVAVKRINGEEN-GEKE-FRSEVAAIAS-AQ 154
+F LG G+ A+ + I SD +VAVK + + E+E SE+ ++
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWI------FPTSRRSEG--HYSGGCLSW 206
H+N+V LLG C + GGP ++ E+ G L +++ F S+ S L
Sbjct: 104 HMNIVNLLGACTI-GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
+ + VAK +++L + +H D+ NILL + DFGL++ + D +
Sbjct: 163 EDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 267 CIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ R ++APE I + + D++SYG+ L EL
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 30/191 (15%)
Query: 125 GTSVAVKRI-NGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNG 182
G VAVK++ + + +++F+ E+ + + +V+ G PG LV E++ +G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 183 SLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRS-------RVLHLD 235
L ++ R+R +D ++ L Y C+ R +H D
Sbjct: 112 CLRDFL-------------------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 152
Query: 236 VKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCD 293
+ NIL++ ++DFGL+KL+ D+ + G + APE + + S + D
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 212
Query: 294 IYSYGMVLLEL 304
++S+G+VL EL
Sbjct: 213 VWSFGVVLYEL 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 102 TDNF--QALLGHGSSASVFKGIL-SDGTSVAVKRINGEENGEKEFRS---EVAAIASAQH 155
+DN+ + LG G+ + V + + + G A K IN ++ ++F+ E QH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
N+VRL + YLV++ + G L I SE S C+
Sbjct: 88 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-CIQ---------Q 136
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIR 272
+ ++++Y H++ ++H ++KPEN+LL + ++DFGL+ + + S
Sbjct: 137 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFA 191
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + + S+ DI++ G++L L G
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCV 166
++G+GS V++ L D G VA+K++ G+ E+ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRELQIMRKLDHCNIVRL----- 78
Query: 167 VPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDVA 217
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 79 -----RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTRG 276
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 187
Query: 277 YLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 98 LEEATDNFQALLGHGSSASV---FKGILSDGTS--VAVKRI-NGEENGEKEFRSEVAAIA 151
EE + + LG G+ SV L D T VAVK++ + + +++F+ E+ +
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 152 SAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY 210
+ +V+ G PG LV E++ +G L ++ R+
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-------------------QRH 108
Query: 211 RVAIDVAKALSYLHNDCRS-------RVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD 263
R +D ++ L Y C+ R +H D+ NIL++ ++DFGL+KL+ D
Sbjct: 109 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 168
Query: 264 QSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + G + APE + + S + D++S+G+VL EL
Sbjct: 169 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKG-ILSDGTSVAVKRI---NGEENGEKEFRSEVAAI---A 151
AT ++ + +G G+ +V+K G VA+K + NGEE EVA +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 152 SAQHVNLVRLLGYCVVPGGPR----YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
+ +H N+VRL+ C R LV+E + D + G L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPG------LPAE 112
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC 267
+ + L +LH +C ++H D+KPENIL+ ++DFGL+++ S +
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA 169
Query: 268 ITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ T Y APE +L+ + D++S G + E+
Sbjct: 170 PVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 84 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 132
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFG +KL+ ++ G + +
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKW 187
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+L G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 82 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 130
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFGL+KL+ ++ G + +
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKW 185
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 104 NFQAL--LGHGSSASV-FKGILSDGTSVAVKRIN----GEENGEKEFRSEVAAIASAQHV 156
N+Q + LG GS V + G VA+K IN + + + E++ + +H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 157 NLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
++++L Y V+ +V E+ N D +I + SE R
Sbjct: 65 HIIKL--YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEAR----------RFFQQ 111
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ A+ Y H R +++H D+KPEN+LLDE+ ++DFGLS +M+ + T G+
Sbjct: 112 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSP 166
Query: 276 GYLAPEWILEQGVS-EKCDIYSYGMVL 301
Y APE I + + + D++S G++L
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 108 LLGHGSSASVFKGI-LSDGTSVAVK------RINGEENGEKEFRSEVAAIASAQHVNLVR 160
+LG G+ +V+KG+ + +G V + R KE E +AS + ++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
LLG C+ L+ + + G L ++ Y L+W + +AK +
Sbjct: 82 LLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQY---LLNW------CVQIAKGM 130
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GY 277
+YL + R++H D+ N+L+ ++DFG +KL+ ++ G + +
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKW 185
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
+A E IL + + + D++SYG+ + EL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E+ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+++D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 104 NFQALLGHGS-----SASVFKGILSDGT-SVAVKRINGEEN-GEKE-FRSEVAAIAS-AQ 154
+F LG G+ A+ + I SD +VAVK + + E+E SE+ ++
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWI------FPTSRRSEG--HYSGGCLSW 206
H+N+V LLG C + GGP ++ E+ G L +++ F S+ S L
Sbjct: 109 HMNIVNLLGACTI-GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
+ + VAK +++L + +H D+ NILL + DFGL++ + D +
Sbjct: 168 EDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 267 CIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ R ++APE I + + D++SYG+ L EL
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E+ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+++D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 114
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 115 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 167
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 168 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 222
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 112
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 113 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 166 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 220
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E+ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+++D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
YLH R+RV+H D+K N+ L+E+ + DFGL+ + D R T+ GT Y+APE
Sbjct: 132 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPE 187
Query: 282 WILEQGVSEKCDIYSYGMVLLELTGGR 308
+ ++G S + D++S G ++ L G+
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
YLH R+RV+H D+K N+ L+E+ + DFGL+ + D R T+ GT Y+APE
Sbjct: 136 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPE 191
Query: 282 WILEQGVSEKCDIYSYGMVLLELTGGR 308
+ ++G S + D++S G ++ L G+
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
YLH R+RV+H D+K N+ L+E+ + DFGL+ + D R T+ GT Y+APE
Sbjct: 132 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPE 187
Query: 282 WILEQGVSEKCDIYSYGMVLLELTGGR 308
+ ++G S + D++S G ++ L G+
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E+ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+++D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E+ G + + R SE H R+ A + YLH+ ++
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 164
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+++D+ V+DFG +K + R C GT YLAPE IL +G ++
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA 219
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 220 VDWWALGVLIYEMAAG 235
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT YLAP IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPAIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFKGILSD---GTSVAVKRINGEENGEKEFR-S 145
P+ + +E E Q LG GS V + + D G AVK++ E FR
Sbjct: 62 PVDYEYRE-EVHWMTHQPRLGRGSFGEVHR--MKDKQTGFQCAVKKVRLEV-----FRVE 113
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVY-EFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
E+ A A +V L G V GP ++ E ++ GSL I GCL
Sbjct: 114 ELVACAGLSSPRIVPLYG--AVREGPWVNIFMELLEGGSLGQLIKQM----------GCL 161
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD-ENYRAVVSDFGLSKLMSRD 263
D + L YLH R+LH DVK +N+LL + RA + DFG + + D
Sbjct: 162 PEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 218
Query: 264 Q-SRCITT---IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ + T I GT ++APE ++ + K DI+S ++L + G
Sbjct: 219 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 104 NFQAL--LGHGSSASV-FKGILSDGTSVAVKRIN----GEENGEKEFRSEVAAIASAQHV 156
N+Q + LG GS V + G VA+K IN + + + E++ + +H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 157 NLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
++++L Y V+ +V E+ N D +I + SE R
Sbjct: 69 HIIKL--YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEAR----------RFFQQ 115
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ A+ Y H R +++H D+KPEN+LLDE+ ++DFGLS +M+ + T G+
Sbjct: 116 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSP 170
Query: 276 GYLAPEWILEQGVS-EKCDIYSYGMVL 301
Y APE I + + + D++S G++L
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 104 NFQAL--LGHGSSASV-FKGILSDGTSVAVKRIN----GEENGEKEFRSEVAAIASAQHV 156
N+Q + LG GS V + G VA+K IN + + + E++ + +H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 157 NLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
++++L Y V+ +V E+ N D +I + SE R
Sbjct: 75 HIIKL--YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEAR----------RFFQQ 121
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ A+ Y H R +++H D+KPEN+LLDE+ ++DFGLS +M+ + T G+
Sbjct: 122 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSP 176
Query: 276 GYLAPEWILEQGVS-EKCDIYSYGMVL 301
Y APE I + + + D++S G++L
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 109 LGHGSSASVFKGILSDGTSV-AVKRIN--GEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
+G GS V+KGI + V A+K I+ E+ ++ + E+ ++ + R G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG-S 85
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
+ +++ E++ GS + P G L + ++ K L YLH+
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKP-----------GPLEETYIATILREILKGLDYLHS 134
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILE 285
+ R +H D+K N+LL E ++DFG++ ++ Q + + GT ++APE I +
Sbjct: 135 E---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQ 190
Query: 286 QGVSEKCDIYSYGMVLLELTGG 307
K DI+S G+ +EL G
Sbjct: 191 SAYDFKADIWSLGITAIELAKG 212
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 116
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 117 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 169
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 170 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 224
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 104 NFQAL--LGHGSSASV-FKGILSDGTSVAVKRIN----GEENGEKEFRSEVAAIASAQHV 156
N+Q + LG GS V + G VA+K IN + + + E++ + +H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 157 NLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
++++L Y V+ +V E+ N D +I + SE R
Sbjct: 74 HIIKL--YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEAR----------RFFQQ 120
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ A+ Y H R +++H D+KPEN+LLDE+ ++DFGLS +M+ + T G+
Sbjct: 121 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSP 175
Query: 276 GYLAPEWILEQGVS-EKCDIYSYGMVL 301
Y APE I + + + D++S G++L
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 102 TDNFQAL--LGHGSSASVFKGI-LSDGTSVAVKRINGEE---NGEKEFRSEVAAIASAQH 155
TD +Q +G G+ + V + + L G A K IN ++ ++ E +H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
N+VRL + G YLV++ + G L I SE S C+
Sbjct: 63 SNIVRLHD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH-CIQ---------Q 111
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIR 272
+ +A+ + H + V+H D+KPEN+LL + ++DFGL+ + DQ
Sbjct: 112 ILEAVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG-FA 167
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + ++ + DI++ G++L L G
Sbjct: 168 GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 109 LGHGSSASVFKGILSDGTSV-AVKRIN--GEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
+G GS VFKGI + V A+K I+ E+ ++ + E+ ++ + + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-S 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
+ +++ E++ GS + P G L + ++ K L YLH+
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKGLDYLHS 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILE 285
+ + +H D+K N+LL E+ ++DFG++ ++ Q + T GT ++APE I +
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPEVIKQ 178
Query: 286 QGVSEKCDIYSYGMVLLELTGG 307
K DI+S G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARG 200
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 108 LLGHGSSASVFKGILSD-GTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYC 165
++G+GS V++ L D G VA+K++ + K F++ E+ + H N+VRL
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRL---- 157
Query: 166 VVPGGPRYLVY-------EFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRY--RVAIDV 216
RY Y E N LD ++ T R HYS + + Y +
Sbjct: 158 ------RYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 210
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
++L+Y+H+ + H D+KP+N+LLD + + + DFG +K + R + + +R
Sbjct: 211 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 265
Query: 276 GYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE I + D++S G VL EL G+
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKG-ILSDGTSVAVKRI---NGEENGEKEFRSEVAAI---A 151
AT ++ + +G G+ +V+K G VA+K + NGEE EVA +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 152 SAQHVNLVRLLGYCVVPGGPR----YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
+ +H N+VRL+ C R LV+E + D + G L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPG------LPAE 112
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC 267
+ + L +LH +C ++H D+KPENIL+ ++DFGL+++ S +
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 167
Query: 268 ITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ + T Y APE +L+ + D++S G + E+
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+ + YLHN+ RV+H D+K N+ L+++ + DFGL+ + D R + GT Y
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNY 208
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+APE + ++G S + DI+S G +L L G+
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 107 ALLGHGSSASVFKGILSD-GTSVAVKRI---NGEENGEKEFRSEVAAIASAQHVNLVRLL 162
L+G GS V K D G VA+K+ + ++ +K E+ + +H NLV LL
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHW-IFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
C YLV+EF+ + LD +FP L + + + + +
Sbjct: 91 EVCK-KKKRWYLVFEFVDHTILDDLELFPNG-----------LDYQVVQKYLFQIINGIG 138
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
+ H+ ++H D+KPENIL+ ++ + DFG ++ ++ + TR Y APE
Sbjct: 139 FCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPE 194
Query: 282 WIL-EQGVSEKCDIYSYGMVLLELTGG 307
++ + + D+++ G ++ E+ G
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM--SRDQSRCITTIRG 273
+ + L Y+H+ + VLH D+KP N+L++ + DFGL+++ D + +T
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKG-ILSDGTSVAVKRI---NGEENGEKEFRSEVAAI---A 151
AT ++ + +G G+ +V+K G VA+K + NGEE EVA +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 152 SAQHVNLVRLLGYCVVPGGPR----YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
+ +H N+VRL+ C R LV+E + D + G L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPG------LPAE 112
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC 267
+ + L +LH +C ++H D+KPENIL+ ++DFGL+++ S +
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF 169
Query: 268 ITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+ T Y APE +L+ + D++S G + E+
Sbjct: 170 PVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+ + YLHN+ RV+H D+K N+ L+++ + DFGL+ + D R + GT Y
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNY 208
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+APE + ++G S + DI+S G +L L G+
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
D+R+ A ++ L ++HN V++ D+KP NILLDE+ +SD GL+ S+ +
Sbjct: 293 DMRFYAA-EIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 267 CITTIRGTRGYLAPEWILEQGVS--EKCDIYSYGMVLLELTGG 307
GT GY+APE +L++GV+ D +S G +L +L G
Sbjct: 349 ASV---GTHGYMAPE-VLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT 270
++ + + KAL YL + V+H DVKP NILLDE + + DFG+S + D+++ +
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 271 IRGTRGYLAPEWILEQGVSE-----KCDIYSYGMVLLELTGGR 308
G Y+APE I ++ + D++S G+ L+EL G+
Sbjct: 186 --GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
D+R+ A ++ L ++HN V++ D+KP NILLDE+ +SD GL+ S+ +
Sbjct: 293 DMRFYAA-EIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 267 CITTIRGTRGYLAPEWILEQGVS--EKCDIYSYGMVLLELTGG 307
GT GY+APE +L++GV+ D +S G +L +L G
Sbjct: 349 ASV---GTHGYMAPE-VLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
D+R+ A ++ L ++HN V++ D+KP NILLDE+ +SD GL+ S+ +
Sbjct: 293 DMRFYAA-EIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 267 CITTIRGTRGYLAPEWILEQGVS--EKCDIYSYGMVLLELTGG 307
GT GY+APE +L++GV+ D +S G +L +L G
Sbjct: 349 ASV---GTHGYMAPE-VLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
Query: 207 DLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSR 266
D+R+ A ++ L ++HN V++ D+KP NILLDE+ +SD GL+ S+ +
Sbjct: 292 DMRFYAA-EIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 347
Query: 267 CITTIRGTRGYLAPEWILEQGVS--EKCDIYSYGMVLLELTGG 307
GT GY+APE +L++GV+ D +S G +L +L G
Sbjct: 348 ASV---GTHGYMAPE-VLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+ + YLHN+ RV+H D+K N+ L+++ + DFGL+ + D R + GT Y
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNY 192
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
+APE + ++G S + DI+S G +L L G+
Sbjct: 193 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 128 VAVKRINGEENG-EKE-FRSEVAAIAS-AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSL 184
VAVK + + EKE SE+ ++ QH N+V LLG C GGP ++ E+ G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH-GGPVLVITEYCCYGDL 122
Query: 185 DHWI-----------FPTSRRSEGHYSGGCLSWDLR--YRVAIDVAKALSYLHNDCRSRV 231
+++ + EG +LR + VA+ +++L
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNC 179
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAPEWILEQGVSE 290
+H DV N+LL + A + DFGL++ + D + + R ++APE I + +
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
Query: 291 KCDIYSYGMVLLEL 304
+ D++SYG++L E+
Sbjct: 240 QSDVWSYGILLWEI 253
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 40/223 (17%)
Query: 108 LLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLL---GY 164
L+G G +V+KG L D VAVK + + + +H N+ R +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDER 78
Query: 165 CVVPGGPRYL-VYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
G YL V E+ NGSL ++ S W R+A V + L+YL
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYL-----------SLHTSDWVSSCRLAHSVTRGLAYL 127
Query: 224 HNDC------RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS--------RDQSRCIT 269
H + + + H D+ N+L+ + V+SDFGLS ++ + + I+
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 270 TIRGTRGYLAPEWILEQGVS--------EKCDIYSYGMVLLEL 304
+ GT Y+APE +LE V+ ++ D+Y+ G++ E+
Sbjct: 188 EV-GTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH++ V++ D+K EN++LD++ ++DFGL K +D + + T GT
Sbjct: 259 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGT 315
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 41/225 (18%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHVNLVRLLGYCVV 167
+G G V++G L G SVAVK I + + FR +E+ +H N+ LG+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNI---LGFIAS 70
Query: 168 PGGPR------YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
R +L+ + ++GSL + F + E H L R+A+ A L+
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSL--YDFLQRQTLEPH---------LALRLAVSAACGLA 119
Query: 222 YLH-----NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR--DQSRCITTIR-G 273
+LH + + H D K N+L+ N + ++D GL+ + S+ D R G
Sbjct: 120 HLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVG 179
Query: 274 TRGYLAPEWILEQGVSEKC-------DIYSYGMVLLELTGGRRNV 311
T+ Y+APE +L++ + C DI+++G+VL E+ RR +
Sbjct: 180 TKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH++ V++ D+K EN++LD++ ++DFGL K +D + + T GT
Sbjct: 256 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGT 312
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E++ G + + R SE H R+ A + YLH+ ++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPH---------ARFYAA-QIVLTFEYLHS---LDLI 163
Query: 233 HLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK 291
+ D+KPEN+L+D+ V+DFG +K + R C GT LAPE IL +G ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEALAPEIILSKGYNKA 218
Query: 292 CDIYSYGMVLLELTGG 307
D ++ G+++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 81 SFLRKVAGVPIKFRSKELEEATDNFQALLGHGSSASVFKGILSDGTSVAVKRINGEENGE 140
SF RK + I + ++ L+G G V+ G VA++ I+ E + E
Sbjct: 13 SFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE 70
Query: 141 ---KEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEG 197
K F+ EV A +H N+V +G C+ P P + + G ++ R ++
Sbjct: 71 DQLKAFKREVMAYRQTRHENVVLFMGACMSP--PHLAIITSLCKGRT---LYSVVRDAK- 124
Query: 198 HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS 257
L + ++A ++ K + YLH +LH D+K +N+ D N + V++DFGL
Sbjct: 125 ----IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLF 176
Query: 258 KLMSRDQS-RCITTIRGTRGY---LAPEWILEQG---------VSEKCDIYSYGMVLLEL 304
+ Q+ R +R G+ LAPE I + S+ D+++ G + EL
Sbjct: 177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 100 EATDNFQA--LLGHGSSASVFKG-ILSDGTSVAVKRINGEENGE----KEFRSEVAAIAS 152
E ++F+ LLG GS A V++ + G VA+K I+ + + + ++EV
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 153 AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHW----IFPTSRRSEGHYSGGCLSWDL 208
+H +++ L Y YLV E NG ++ + + P S H+
Sbjct: 68 LKHPSILELYNY-FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH------- 119
Query: 209 RYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI 268
+ + YLH+ +LH D+ N+LL N ++DFGL+ + +
Sbjct: 120 ------QIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170
Query: 269 TTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
T+ GT Y++PE + D++S G + L GR
Sbjct: 171 -TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
LG G+++ V++ ++ + +K R+E+ + H N+++L P
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETP 120
Query: 169 GGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK----ALSYLH 224
LV E + G L I +G+YS R A D K A++YLH
Sbjct: 121 TEIS-LVLELVTGGELFDRIV-----EKGYYSE---------RDAADAVKQILEAVAYLH 165
Query: 225 NDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
+ ++H D+KPEN+L + ++DFGLSK++ + + T+ GT GY APE
Sbjct: 166 EN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGTPGYCAPE 220
Query: 282 WILEQGVSEKCDIYSYGMVLLELTGG 307
+ + D++S G++ L G
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFKGILSD---GTSVAVKRINGEENGEKEFR-S 145
P+ + +E E Q +G GS V + + D G AVK++ E FR
Sbjct: 64 PVDYEYRE-EVHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVRLEV-----FRVE 115
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVY-EFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
E+ A A +V L G V GP ++ E ++ GSL I GCL
Sbjct: 116 ELVACAGLSSPRIVPLYG--AVREGPWVNIFMELLEGGSLGQLIKQM----------GCL 163
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD-ENYRAVVSDFGLSKLMSRD 263
D + L YLH R+LH DVK +N+LL + RA + DFG + + D
Sbjct: 164 PEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 220
Query: 264 Q-SRCITT---IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ + T I GT ++APE ++ + K DI+S ++L + G
Sbjct: 221 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFKGILSD---GTSVAVKRINGEENGEKEFR-S 145
P+ + +E E Q +G GS V + + D G AVK++ E FR
Sbjct: 48 PVDYEYRE-EVHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVRLEV-----FRVE 99
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVY-EFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
E+ A A +V L G V GP ++ E ++ GSL I GCL
Sbjct: 100 ELVACAGLSSPRIVPLYG--AVREGPWVNIFMELLEGGSLGQLIKQM----------GCL 147
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD-ENYRAVVSDFGLSKLMSRD 263
D + L YLH R+LH DVK +N+LL + RA + DFG + + D
Sbjct: 148 PEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204
Query: 264 Q-SRCITT---IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ + T I GT ++APE ++ + K DI+S ++L + G
Sbjct: 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 26/116 (22%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILL-DENY------------RAV------V 251
+A + +A+ +LH++ ++ H D+KPENIL + +Y R+V V
Sbjct: 141 HMAFQLCQAVKFLHDN---KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRV 197
Query: 252 SDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
DFG + S TI TR Y APE ILE G S+ CD++S G ++ E G
Sbjct: 198 VDFGSATFDHEHHS----TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 73/264 (27%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE-------------GHYSGGCLSW 206
LLG C PGGP ++ EF + G+L ++ S+R+E G G +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKTKGARFRQGKDYVGAIPV 154
Query: 207 DLRYRV---------------------------------------------AIDVAKALS 221
DL+ R+ + VAK +
Sbjct: 155 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 214
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAP 280
+L + + +H D+ NILL E + DFGL++ + +D R ++AP
Sbjct: 215 FLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 271
Query: 281 EWILEQGVSEKCDIYSYGMVLLEL 304
E I ++ + + D++S+G++L E+
Sbjct: 272 ETIFDRVYTIQSDVWSFGVLLWEI 295
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 73/264 (27%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE-------------GHYSGGCLSW 206
LLG C PGGP ++ EF + G+L ++ S+R+E G G +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKTKGARFRQGKDYVGAIPV 152
Query: 207 DLRYRV---------------------------------------------AIDVAKALS 221
DL+ R+ + VAK +
Sbjct: 153 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 212
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAP 280
+L + + +H D+ NILL E + DFGL++ + +D R ++AP
Sbjct: 213 FLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 269
Query: 281 EWILEQGVSEKCDIYSYGMVLLEL 304
E I ++ + + D++S+G++L E+
Sbjct: 270 ETIFDRVYTIQSDVWSFGVLLWEI 293
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 25/206 (12%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVRLLGYCV 166
LG G+ V+K + ++A ++ ++ E+ ++ E+ +A+ H +V+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-AY 77
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSR-RSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +++ EF G++D + R +E C + +AL++LH+
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ----------MLEALNFLHS 127
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLS-KLMSRDQSRCITTIRGTRGYLAPEWIL 284
R++H D+K N+L+ ++DFG+S K + Q R + GT ++APE ++
Sbjct: 128 ---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVM 182
Query: 285 EQGVSE-----KCDIYSYGMVLLELT 305
+ + + K DI+S G+ L+E+
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMA 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 52/231 (22%)
Query: 103 DNFQAL--LGHGSSASVFKGILSDGTSVAVKRINGEENGE-------------------K 141
+NF+ L LG G+ VF V++I+G + G+ +
Sbjct: 54 ENFELLKVLGTGAYGKVF----------LVRKISGHDTGKLYAMKVLKKATIVQKAKTTE 103
Query: 142 EFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSG 201
R+E + + + L Y +L+ ++I G L + R +E
Sbjct: 104 HTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE----- 158
Query: 202 GCLSWDLRYRVAIDVAK---ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK 258
+ V I V + AL +LH + +++ D+K ENILLD N V++DFGLSK
Sbjct: 159 --------HEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207
Query: 259 LMSRDQSRCITTIRGTRGYLAPEWIL--EQGVSEKCDIYSYGMVLLELTGG 307
D++ GT Y+AP+ + + G + D +S G+++ EL G
Sbjct: 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC--ITTIRG 273
+ + L Y+H+ + VLH D+KP N+LL+ + DFGL+++ D +
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
TR Y APE +L +G ++ DI+S G +L E+ R
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 73/264 (27%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE-------------GHYSGGCLSW 206
LLG C PGGP ++ EF + G+L ++ S+R+E G G +
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKTKGARFRQGKDYVGAIPV 145
Query: 207 DLRYRV---------------------------------------------AIDVAKALS 221
DL+ R+ + VAK +
Sbjct: 146 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 205
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAP 280
+L + + +H D+ NILL E + DFGL++ + +D R ++AP
Sbjct: 206 FLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 262
Query: 281 EWILEQGVSEKCDIYSYGMVLLEL 304
E I ++ + + D++S+G++L E+
Sbjct: 263 ETIFDRVYTIQSDVWSFGVLLWEI 286
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTI 271
A + YLH+ +++ D+KPEN+++D+ V+DFG +K + R C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 199
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT YLAPE IL +G ++ D ++ G+++ E+ G
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 19/233 (8%)
Query: 108 LLGHGSSASVFKGILSDGTSVAVKRINGEE--NGEKEF---RSEVAAIASAQHVNLVRLL 162
++G GS A V L + R+ +E N +++ ++E A + + L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
C + V E++ G L + + E H R+ A +++ AL+Y
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH---------ARFYSA-EISLALNY 168
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
LH +++ D+K +N+LLD ++D+G+ K R +T GT Y+APE
Sbjct: 169 LH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSTFCGTPNYIAPEI 224
Query: 283 ILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEK 335
+ + D ++ G+++ E+ GR ++ ++ +N Y +++ EK
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 277
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 25/206 (12%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK--EFRSEVAAIASAQHVNLVRLLGYCV 166
LG G+ V+K + ++A ++ ++ E+ ++ E+ +A+ H +V+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-AY 85
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSR-RSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G +++ EF G++D + R +E C + +AL++LH+
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ----------MLEALNFLHS 135
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLS-KLMSRDQSRCITTIRGTRGYLAPEWIL 284
R++H D+K N+L+ ++DFG+S K + Q R + GT ++APE ++
Sbjct: 136 ---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVM 190
Query: 285 EQGVSE-----KCDIYSYGMVLLELT 305
+ + + K DI+S G+ L+E+
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMA 216
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E ++ D + F T R G
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERMEPVQ-DLFDFITER--------GA 110
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 111 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 165
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 166 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 73/264 (27%)
Query: 109 LGHGSSASVFK----GILSDGT--SVAVKRIN-GEENGE-KEFRSEVAA-IASAQHVNLV 159
LG G+ V + GI T +VAVK + G + E + SE+ I H+N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 160 RLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSE-------------GHYSGGCLSW 206
LLG C PGGP ++ EF + G+L ++ S+R+E G G +
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKTKGARFRQGKDYVGAIPV 147
Query: 207 DLRYRV---------------------------------------------AIDVAKALS 221
DL+ R+ + VAK +
Sbjct: 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 207
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCIT-TIRGTRGYLAP 280
+L + + +H D+ NILL E + DFGL++ + +D R ++AP
Sbjct: 208 FLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 264
Query: 281 EWILEQGVSEKCDIYSYGMVLLEL 304
E I ++ + + D++S+G++L E+
Sbjct: 265 ETIFDRVYTIQSDVWSFGVLLWEI 288
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK-LMSRDQSRCITTI 271
A + YLH+ +++ D+KPEN+++D+ V+DFG +K + R C
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT YLAPE IL +G ++ D ++ G+++ E+ G
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR 272
A ++ L LH R R+++ D+KPENILLD++ +SD GL+ + Q+ I
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV 346
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
GT GY+APE + + + D ++ G +L E+ G+
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 59/254 (23%)
Query: 92 KFRSKELEEAT----DNFQALLGHGSSA-----SVFKGILSDGTSVAVKRIN----GEEN 138
+F S ++ ++T +Q L GS A + F +L G +VAVK+++ + +
Sbjct: 7 QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTH 64
Query: 139 GEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPR------YLVYEFIQ-------NGSLD 185
++ +R E+ + H N++ LL P YLV E + + LD
Sbjct: 65 AKRAYR-ELVLLKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD 122
Query: 186 HWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDE 245
H R S Y C + +LH+ + ++H D+KP NI++
Sbjct: 123 H-----ERMSYLLYQMLC---------------GIKHLHS---AGIIHRDLKPSNIVVKS 159
Query: 246 NYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELT 305
+ + DFGL++ S + +T TR Y APE IL G E DI+S G ++ EL
Sbjct: 160 DCTLKILDFGLARTASTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
Query: 306 GGRRNVSLIEHGND 319
G S+I G D
Sbjct: 218 KG----SVIFQGTD 227
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 29/201 (14%)
Query: 126 TSVAVKRI--NGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGS 183
T+VAVK + N + ++ SE + H ++++L G C GP L+ E+ + GS
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-DGPLLLIVEYAKYGS 112
Query: 184 LDHWIFPTSRRSEG--------------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRS 229
L ++ + + G H L+ A +++ + YL
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEM 169
Query: 230 RVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW-----IL 284
+++H D+ NIL+ E + +SDFGL SRD + ++ ++G + +W +
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGL----SRDVYEEDSXVKRSQGRIPVKWMAIESLF 225
Query: 285 EQGVSEKCDIYSYGMVLLELT 305
+ + + D++S+G++L E+
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIV 246
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
YLH R+RV+H D+K N+ L+E+ + DFGL+ + D R + GT Y+APE
Sbjct: 130 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPE 185
Query: 282 WILEQGVSEKCDIYSYGMVLLELTGGR 308
+ ++G S + D++S G ++ L G+
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
YLH R+RV+H D+K N+ L+E+ + DFGL+ + D R + GT Y+APE
Sbjct: 156 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPE 211
Query: 282 WILEQGVSEKCDIYSYGMVLLELTGGR 308
+ ++G S + D++S G ++ L G+
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR 272
A ++ L LH R R+++ D+KPENILLD++ +SD GL+ + Q+ I
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV 346
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
GT GY+APE + + + D ++ G +L E+ G+
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
YLH R+RV+H D+K N+ L+E+ + DFGL+ + D R + GT Y+APE
Sbjct: 154 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPE 209
Query: 282 WILEQGVSEKCDIYSYGMVLLELTGGR 308
+ ++G S + D++S G ++ L G+
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 39/225 (17%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
+G G V++G G +VAVK + + +E+ +H N+ LG+
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIASD 71
Query: 169 GGPR------YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
R +L+ + + GSL ++ T+ + CL R+ + +A L++
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-----CL------RIVLSIASGLAH 120
Query: 223 LH-----NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR---GT 274
LH + + H D+K +NIL+ +N + ++D GL+ + S+ ++ GT
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 275 RGYLAPEWILEQGVSEKC-------DIYSYGMVLLELTGGRRNVS 312
+ Y+APE +L++ + C DI+++G+VL E+ RR VS
Sbjct: 181 KRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS 222
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ L +LH + +++ D+KPEN+LLD++ +SD GL+ + Q++ GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
G++APE +L + D ++ G+ L E+ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 39/225 (17%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
+G G V++G G +VAVK + + +E+ +H N+ LG+
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIASD 71
Query: 169 GGPR------YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
R +L+ + + GSL ++ T+ + CL R+ + +A L++
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-----CL------RIVLSIASGLAH 120
Query: 223 LH-----NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR---GT 274
LH + + H D+K +NIL+ +N + ++D GL+ + S+ ++ GT
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 275 RGYLAPEWILEQGVSEKC-------DIYSYGMVLLELTGGRRNVS 312
+ Y+APE +L++ + C DI+++G+VL E+ RR VS
Sbjct: 181 KRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS 222
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ L +LH + +++ D+KPEN+LLD++ +SD GL+ + Q++ GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
G++APE +L + D ++ G+ L E+ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ L +LH + +++ D+KPEN+LLD++ +SD GL+ + Q++ GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
G++APE +L + D ++ G+ L E+ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+ L +LH +C ++H D+KPENIL+ ++DFGL+++ S + +T + T Y
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPVVVTLWY 185
Query: 278 LAPEWILEQGVSEKCDIYSYGMVLLEL 304
APE +L+ + D++S G + E+
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 153 AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV 212
QH N++ L G YLV E ++ G L I SE S V
Sbjct: 78 GQHPNIITLKD-VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS----------FV 126
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENIL-LDENYRAV---VSDFGLSKLMSRDQSRCI 268
+ K + YLH+ V+H D+KP NIL +DE+ + DFG +K + R ++ +
Sbjct: 127 LHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLL 182
Query: 269 TTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T T ++APE + QG E CDI+S G++L + G
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLS 205
EVA + H N+++L + YLV E + G L I + SE +
Sbjct: 54 EVAVLKQLDHPNIMKLYEF-FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA----- 107
Query: 206 WDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLS---KL 259
+ V +YLH + ++H D+KPEN+LL+ R + DFGLS ++
Sbjct: 108 -----VIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV 159
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ + R GT Y+APE +L + EKCD++S G++L L G
Sbjct: 160 GGKMKERL-----GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 109 LGHGSSASVFKGILSDGTSV-AVKRIN--GEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
+G GS VFKGI + V A+K I+ E+ ++ + E+ ++ + + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-S 73
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
+ +++ E++ GS + P G L + ++ K L YLH+
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKGLDYLHS 122
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILE 285
+ + +H D+K N+LL E+ ++DFG++ ++ Q + GT ++APE I +
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPFWMAPEVIKQ 178
Query: 286 QGVSEKCDIYSYGMVLLELTGG 307
K DI+S G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARG 200
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ L +LH + +++ D+KPEN+LLD++ +SD GL+ + Q++ GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 276 GYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
G++APE +L + D ++ G+ L E+ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 29/201 (14%)
Query: 126 TSVAVKRI--NGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGS 183
T+VAVK + N + ++ SE + H ++++L G C GP L+ E+ + GS
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-DGPLLLIVEYAKYGS 112
Query: 184 LDHWIFPTSRRSEG--------------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRS 229
L ++ + + G H L+ A +++ + YL
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEM 169
Query: 230 RVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW-----IL 284
+++H D+ NIL+ E + +SDFGL SRD + ++ ++G + +W +
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGL----SRDVYEEDSYVKRSQGRIPVKWMAIESLF 225
Query: 285 EQGVSEKCDIYSYGMVLLELT 305
+ + + D++S+G++L E+
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIV 246
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFKGILSD---GTSVAVKRINGEENGEKEFRSE 146
P+ + +E E Q LG GS V + + D G AVK++ E FR+E
Sbjct: 83 PVDYEYRE-EVHWATHQLRLGRGSFGEVHR--MEDKQTGFQCAVKKVRLEV-----FRAE 134
Query: 147 -VAAIASAQHVNLVRLLGYCVVPGGPRYLVY-EFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
+ A A +V L G V GP ++ E ++ GSL + GCL
Sbjct: 135 ELMACAGLTSPRIVPLYG--AVREGPWVNIFMELLEGGSLGQLV----------KEQGCL 182
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD-ENYRAVVSDFGLSKLMSRD 263
D + L YLH+ R+LH DVK +N+LL + A + DFG + + D
Sbjct: 183 PEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 239
Query: 264 Q-SRCITT---IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ + T I GT ++APE +L + K D++S ++L + G
Sbjct: 240 GLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 153 AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV 212
QH N++ L G YLV E ++ G L I SE S V
Sbjct: 78 GQHPNIITLKD-VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS----------FV 126
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENIL-LDENYRAV---VSDFGLSKLMSRDQSRCI 268
+ K + YLH+ V+H D+KP NIL +DE+ + DFG +K + R ++ +
Sbjct: 127 LHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLL 182
Query: 269 TTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T T ++APE + QG E CDI+S G++L + G
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 108 LLGHGSSASVFKGILSD----GTSVAVKRINGE---ENGEKEFRSEVAAIASAQHVNLVR 160
+LG G V++G+ ++ +VAVK + +N EK F SE + + H ++V+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIVK 73
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L+G ++ P +++ E G L H++ R++ S L+ L ++ + KA+
Sbjct: 74 LIG--IIEEEPTWIIMELYPYGELGHYL----ERNKN--SLKVLTLVL---YSLQICKAM 122
Query: 221 SYLHN-DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLA 279
+YL + +C +H D+ NIL+ + DFGLS+ + + + R +++
Sbjct: 123 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 178
Query: 280 PEWILEQGVSEKCDIYSYGMVLLE-LTGGRRNVSLIEHGN 318
PE I + + D++ + + + E L+ G++ +E+ +
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 218
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD-------------------ENYRAVV 251
+A + AL +LH + ++ H D+KPENIL +N V
Sbjct: 136 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 192
Query: 252 SDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+DFG + TTI TR Y PE ILE G ++ CD++S G +L E G
Sbjct: 193 ADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 39/225 (17%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
+G G V++G G +VAVK + + +E+ +H N+ LG+
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIASD 100
Query: 169 GGPR------YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
R +L+ + + GSL ++ T+ + CL R+ + +A L++
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-----CL------RIVLSIASGLAH 149
Query: 223 LH-----NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR---GT 274
LH + + H D+K +NIL+ +N + ++D GL+ + S+ ++ GT
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 275 RGYLAPEWILEQGVSEKC-------DIYSYGMVLLELTGGRRNVS 312
+ Y+APE +L++ + C DI+++G+VL E+ RR VS
Sbjct: 210 KRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS 251
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 109 LGHGSSASVFKGILSDGTSV-AVKRIN--GEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
+G GS VFKGI + V A+K I+ E+ ++ + E+ ++ + + G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-S 88
Query: 166 VVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
+ +++ E++ GS + P G L + ++ K L YLH+
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKGLDYLHS 137
Query: 226 DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILE 285
+ + +H D+K N+LL E+ ++DFG++ ++ Q + GT ++APE I +
Sbjct: 138 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPFWMAPEVIKQ 193
Query: 286 QGVSEKCDIYSYGMVLLELTGG 307
K DI+S G+ +EL G
Sbjct: 194 SAYDSKADIWSLGITAIELARG 215
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD-------------------ENYRAVV 251
+A + AL +LH + ++ H D+KPENIL +N V
Sbjct: 127 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 183
Query: 252 SDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+DFG + TTI TR Y PE ILE G ++ CD++S G +L E G
Sbjct: 184 ADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD-------------------ENYRAVV 251
+A + AL +LH + ++ H D+KPENIL +N V
Sbjct: 159 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 215
Query: 252 SDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+DFG + TTI TR Y PE ILE G ++ CD++S G +L E G
Sbjct: 216 ADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 102 TDNFQAL--LGHGSSASVFKGILSDGTS-VAVKRINGEE---NGEKEFRSEVAAIASAQH 155
TD++Q LG G+ + V + + T A K IN ++ ++ E +H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
N+VRL + G YLV++ + G L I SE S C+
Sbjct: 90 PNIVRLHD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH-CIH---------Q 138
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIR 272
+ ++++++H + ++H D+KPEN+LL + ++DFGL+ + +Q
Sbjct: 139 ILESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG-FA 194
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + + + DI++ G++L L G
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 102 TDNFQAL--LGHGSSASVFKGI-LSDGTSVAVKRINGEE---NGEKEFRSEVAAIASAQH 155
TD +Q LG G+ + V + + + G A K IN ++ ++ E +H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
N+VRL + G YLV++ + G L I SE S C+
Sbjct: 63 PNIVRLHD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH-CIQ---------Q 111
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIR 272
+ +++++ H + ++H D+KPEN+LL + ++DFGL+ + DQ
Sbjct: 112 ILESVNHCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-FA 167
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + + + D+++ G++L L G
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P +++ D + F T R G
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITER--------GA 111
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 112 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 166
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 167 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 26/116 (22%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILL---------------DE----NYRAVV 251
++A + K++++LH++ ++ H D+KPENIL DE N V
Sbjct: 122 KMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178
Query: 252 SDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
DFG + S T+ TR Y APE IL G S+ CD++S G +L+E G
Sbjct: 179 VDFGSATYDDEHHS----TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 110
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 111 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 165
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 166 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 108 LLGHGSSASVFKGILSD----GTSVAVKRINGE---ENGEKEFRSEVAAIASAQHVNLVR 160
+LG G V++G+ ++ +VAVK + +N EK F SE + + H ++V+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIVK 89
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L+G ++ P +++ E G L H++ R++ S L+ L ++ + KA+
Sbjct: 90 LIG--IIEEEPTWIIMELYPYGELGHYL----ERNKN--SLKVLTLVL---YSLQICKAM 138
Query: 221 SYLHN-DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLA 279
+YL + +C +H D+ NIL+ + DFGLS+ + + + R +++
Sbjct: 139 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 194
Query: 280 PEWILEQGVSEKCDIYSYGMVLLE-LTGGRRNVSLIEHGN 318
PE I + + D++ + + + E L+ G++ +E+ +
Sbjct: 195 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 234
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 126 TSVAVKRI--NGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGS 183
T+VAVK + N + ++ SE + H ++++L G C GP L+ E+ + GS
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-DGPLLLIVEYAKYGS 112
Query: 184 LDHWIFPTSRRSEG--------------HYSGGCLSWDLRYRVAIDVAKALSYLHNDCRS 229
L ++ + + G H L+ A +++ + YL
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEM 169
Query: 230 RVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW-----IL 284
++H D+ NIL+ E + +SDFGL SRD + ++ ++G + +W +
Sbjct: 170 SLVHRDLAARNILVAEGRKMKISDFGL----SRDVYEEDSXVKRSQGRIPVKWMAIESLF 225
Query: 285 EQGVSEKCDIYSYGMVLLELT 305
+ + + D++S+G++L E+
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIV 246
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 102 TDNFQAL--LGHGSSASVFKGI-LSDGTSVAVKRINGEE---NGEKEFRSEVAAIASAQH 155
TD +Q LG G+ + V + + + G A K IN ++ ++ E +H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
N+VRL + G YLV++ + G L I SE S C+
Sbjct: 63 PNIVRLHD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH-CIQ---------Q 111
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITTIR 272
+ +++++ H + ++H D+KPEN+LL + ++DFGL+ + DQ
Sbjct: 112 ILESVNHCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-FA 167
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + + + D+++ G++L L G
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 108 LLGHGSSASVFKGILSD----GTSVAVKRINGE---ENGEKEFRSEVAAIASAQHVNLVR 160
+LG G V++G+ ++ +VAVK + +N EK F SE + + H ++V+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIVK 77
Query: 161 LLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKAL 220
L+G ++ P +++ E G L H++ R++ S L+ L ++ + KA+
Sbjct: 78 LIG--IIEEEPTWIIMELYPYGELGHYL----ERNKN--SLKVLTLVL---YSLQICKAM 126
Query: 221 SYLHN-DCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLA 279
+YL + +C +H D+ NIL+ + DFGLS+ + + + R +++
Sbjct: 127 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 182
Query: 280 PEWILEQGVSEKCDIYSYGMVLLE-LTGGRRNVSLIEHGN 318
PE I + + D++ + + + E L+ G++ +E+ +
Sbjct: 183 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 222
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 133
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 134 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 188
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 189 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 153
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 154 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 208
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 209 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 138
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 139 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 193
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 194 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 111
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 112 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 166
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 167 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 32/211 (15%)
Query: 109 LGHGSSASVFKGI-LSDGTSVAVKRINGEENGEKEFRSEVAA---------IASAQHVNL 158
+G G+ SV I G VA+K+++ + F+SE+ A + QH N+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLS------RPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
+ LL P Y+F + + P + G S + + + K
Sbjct: 104 IGLLD-VFTPASSLRNFYDF-------YLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLK 155
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
L Y+H+ + V+H D+KP N+ ++E+ + DFGL++ + + + TR Y
Sbjct: 156 GLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYR 208
Query: 279 APEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
APE IL ++ DI+S G ++ E+ G+
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 90 PIKFRSKELEEATDNFQALLGHGSSASVFKGILSD---GTSVAVKRINGEENGEKEFRSE 146
P+ + +E E Q LG GS V + + D G AVK++ E FR+E
Sbjct: 64 PVDYEYRE-EVHWATHQLRLGRGSFGEVHR--MEDKQTGFQCAVKKVRLEV-----FRAE 115
Query: 147 -VAAIASAQHVNLVRLLGYCVVPGGPRYLVY-EFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
+ A A +V L G V GP ++ E ++ GSL + GCL
Sbjct: 116 ELMACAGLTSPRIVPLYG--AVREGPWVNIFMELLEGGSLGQLV----------KEQGCL 163
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD-ENYRAVVSDFGLSKLMSRD 263
D + L YLH+ R+LH DVK +N+LL + A + DFG + + D
Sbjct: 164 PEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 220
Query: 264 Q-SRCITT---IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ + T I GT ++APE +L + K D++S ++L + G
Sbjct: 221 GLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 29/208 (13%)
Query: 109 LGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLL 162
+G G+ A V + IL+ G VA+K I+ + + +K FR EV + H N+V+L
Sbjct: 20 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLF 77
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
+ YL+ E+ G + ++ R E ++R + A+ Y
Sbjct: 78 E-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-------KFR---QIVSAVQY 126
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H + R++H D+K EN+LLD + ++DFG S + + T G+ Y APE
Sbjct: 127 CH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDTFCGSPPYAAPE- 180
Query: 283 ILEQGVS---EKCDIYSYGMVLLELTGG 307
L QG + D++S G++L L G
Sbjct: 181 -LFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 125
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 126 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 180
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 181 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 125
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 126 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 180
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 181 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 29/212 (13%)
Query: 105 FQALLGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNL 158
Q +G G+ A V + +L+ G VAVK I+ + + +K FR EV + H N+
Sbjct: 19 LQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNI 76
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
V+L + YLV E+ G + ++ R E ++R +
Sbjct: 77 VKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-------KFR---QIVS 125
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
A+ Y H + ++H D+K EN+LLD + ++DFG S + + T G+ Y
Sbjct: 126 AVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTFCGSPPYA 180
Query: 279 APEWILEQGVS---EKCDIYSYGMVLLELTGG 307
APE L QG + D++S G++L L G
Sbjct: 181 APE--LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 145
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 146 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 200
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 201 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 126
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 127 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 181
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 182 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 139
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 140 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 194
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 195 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 138
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 139 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 193
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 194 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 126
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 127 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 181
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 182 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLS 205
EVA + H N+++L + YLV E + G L I + SE +
Sbjct: 71 EVAVLKQLDHPNIMKLYEF-FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA----- 124
Query: 206 WDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLS---KL 259
+ V +YLH + ++H D+KPEN+LL+ R + DFGLS ++
Sbjct: 125 -----VIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV 176
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ + R GT Y+APE +L + EKCD++S G++L L G
Sbjct: 177 GGKMKERL-----GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 32/211 (15%)
Query: 109 LGHGSSASVFKGI-LSDGTSVAVKRINGEENGEKEFRSEVAA---------IASAQHVNL 158
+G G+ SV I G VA+K+++ + F+SE+ A + QH N+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLS------RPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAK 218
+ LL P Y+F + + P + G S + + + K
Sbjct: 86 IGLLD-VFTPASSLRNFYDF-------YLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLK 137
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
L Y+H+ + V+H D+KP N+ ++E+ + DFGL++ + + + TR Y
Sbjct: 138 GLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYR 190
Query: 279 APEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
APE IL ++ DI+S G ++ E+ G+
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 111
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 112 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 166
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 167 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 138
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 139 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 193
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 194 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 139
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 140 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 194
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 195 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 138
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 139 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 193
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 194 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 126
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 127 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 181
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 182 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH++ V++ D+K EN++LD++ ++DFGL K +D + + GT
Sbjct: 116 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGT 172
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH++ V++ D+K EN++LD++ ++DFGL K +D + + GT
Sbjct: 117 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGT 173
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH++ V++ D+K EN++LD++ ++DFGL K +D + + GT
Sbjct: 118 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGT 174
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 158
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 159 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 213
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 214 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 43/219 (19%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E ++ G L + R E C + + +A+ YLH + ++
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEA----TCKLYFYQMLLAV------QYLHEN---GII 136
Query: 233 HLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVS 289
H D+KPEN+LL +E+ ++DFG SK++ ++ + T+ GT YLAPE ++ G +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 290 ---EKCDIYSYGMVLLELTGG-------RRNVSLIEHGNDKSKNKWQYFPKI---VNEK- 335
D +S G++L G R VSL + + K+ + P++ V+EK
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---KDQITSGKYNFIPEVWAEVSEKA 251
Query: 336 MKEGKLMEIVDQ--RLTDEGGI------DETQVRRLVDV 366
+ K + +VD R T E + DE R+ D+
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 139
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 140 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 194
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 195 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 139
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 140 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 194
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 195 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 43/219 (19%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E ++ G L + R E C + + +A+ YLH + ++
Sbjct: 89 YIVLELMEGGELFDKVVGNKRLKEA----TCKLYFYQMLLAV------QYLHEN---GII 135
Query: 233 HLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVS 289
H D+KPEN+LL +E+ ++DFG SK++ ++ + T+ GT YLAPE ++ G +
Sbjct: 136 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTA 193
Query: 290 ---EKCDIYSYGMVLLELTGG-------RRNVSLIEHGNDKSKNKWQYFPKI---VNEK- 335
D +S G++L G R VSL + + K+ + P++ V+EK
Sbjct: 194 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---KDQITSGKYNFIPEVWAEVSEKA 250
Query: 336 MKEGKLMEIVDQ--RLTDEGGI------DETQVRRLVDV 366
+ K + +VD R T E + DE R+ D+
Sbjct: 251 LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 289
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 146 EVAAIASAQHVNLVRLLGYCVVPGGPR-YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCL 204
E+A + H N+V+L+ P Y+V+E + G + PT + L
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME--VPTLKP---------L 134
Query: 205 SWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ 264
S D D+ K + YLH +++H D+KP N+L+ E+ ++DFG+S
Sbjct: 135 SEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 265 SRCITTIRGTRGYLAPEWILEQ---GVSEKCDIYSYGMVLLELTGGR 308
+ T+ GT ++APE + E + D+++ G+ L G+
Sbjct: 192 ALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 43/219 (19%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E ++ G L + R E C + + +A+ YLH + ++
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEA----TCKLYFYQMLLAV------QYLHEN---GII 136
Query: 233 HLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVS 289
H D+KPEN+LL +E+ ++DFG SK++ ++ + T+ GT YLAPE ++ G +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 290 ---EKCDIYSYGMVLLELTGG-------RRNVSLIEHGNDKSKNKWQYFPKI---VNEK- 335
D +S G++L G R VSL + + K+ + P++ V+EK
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---KDQITSGKYNFIPEVWAEVSEKA 251
Query: 336 MKEGKLMEIVDQ--RLTDEGGI------DETQVRRLVDV 366
+ K + +VD R T E + DE R+ D+
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH+ V++ D+K EN++LD++ ++DFGL K D + + T GT
Sbjct: 113 EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGT 168
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 42/227 (18%)
Query: 109 LGHGSSASVFKGI-LSDGTSVAVKRI----NGEENGEKEFRSEVAAIASAQHVNLVRLLG 163
LG G+ V+K I G VAVK+I + ++ FR + + H N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 164 YCVVPGG-PRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
YLV+++++ H + + H + V + K + Y
Sbjct: 77 VLRADNDRDVYLVFDYMETDL--HAVIRANILEPVH----------KQYVVYQLIKVIKY 124
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSR-------------------- 262
LH+ +LH D+KP NILL+ V+DFGLS+
Sbjct: 125 LHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 263 DQSRCITTIRGTRGYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
D +T TR Y APE +L ++ D++S G +L E+ G+
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 43/219 (19%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E ++ G L + R E C + + +A+ YLH + ++
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEA----TCKLYFYQMLLAV------QYLHEN---GII 136
Query: 233 HLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVS 289
H D+KPEN+LL +E+ ++DFG SK++ ++ + T+ GT YLAPE ++ G +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 290 ---EKCDIYSYGMVLLELTGG-------RRNVSLIEHGNDKSKNKWQYFPKI---VNEK- 335
D +S G++L G R VSL + + K+ + P++ V+EK
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---KDQITSGKYNFIPEVWAEVSEKA 251
Query: 336 MKEGKLMEIVDQ--RLTDEGGI------DETQVRRLVDV 366
+ K + +VD R T E + DE R+ D+
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRS 145
+ KE E+ LLG G SV+ GI +SD VA+K + GE
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 146 EVAAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGC 203
EV + S+ ++RLL + P L+ E + D + F T R G
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GA 153
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSR 262
L +L V +A+ + HN VLH D+K ENIL+D N + + DFG L+
Sbjct: 154 LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-- 208
Query: 263 DQSRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
+ T GTR Y PEWI + ++S G++L ++ G
Sbjct: 209 -KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 43/219 (19%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y+V E ++ G L + R E C + + +A+ YLH + ++
Sbjct: 96 YIVLELMEGGELFDKVVGNKRLKEA----TCKLYFYQMLLAV------QYLHEN---GII 142
Query: 233 HLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVS 289
H D+KPEN+LL +E+ ++DFG SK++ ++ + T+ GT YLAPE ++ G +
Sbjct: 143 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTA 200
Query: 290 ---EKCDIYSYGMVLLELTGG-------RRNVSLIEHGNDKSKNKWQYFPKI---VNEK- 335
D +S G++L G R VSL + + K+ + P++ V+EK
Sbjct: 201 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---KDQITSGKYNFIPEVWAEVSEKA 257
Query: 336 MKEGKLMEIVDQ--RLTDEGGI------DETQVRRLVDV 366
+ K + +VD R T E + DE R+ D+
Sbjct: 258 LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 296
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 95/224 (42%), Gaps = 28/224 (12%)
Query: 96 KELEEATDNFQALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRSEV 147
KE E+ LLG G SV+ GI +SD VA+K + GE EV
Sbjct: 2 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 61
Query: 148 AAI--ASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLS 205
+ S+ ++RLL + P +++ D + F T R G L
Sbjct: 62 VLLKKVSSGFSGVIRLLDWFERPDS--FVLILERPEPVQDLFDFITER--------GALQ 111
Query: 206 WDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQ 264
+L V +A+ + HN VLH D+K ENIL+D N + + DFG L+ +
Sbjct: 112 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---K 165
Query: 265 SRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
T GTR Y PEWI + ++S G++L ++ G
Sbjct: 166 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH+ V++ D+K EN++LD++ ++DFGL K D + + T GT
Sbjct: 113 EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGT 168
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH+ V++ D+K EN++LD++ ++DFGL K D + + T GT
Sbjct: 116 EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGT 171
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 36/261 (13%)
Query: 65 LESKFVTEGRELR-IEYSFLRKVAGVPIKFRSKELEEATDNFQALLGHGSSASVFKGILS 123
L+ F++EG L+ + Y +G + + T Q +G G V++G
Sbjct: 5 LDRPFISEGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR 64
Query: 124 DGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPR---YLVYEFIQ 180
G VAVK + E +E+ +H N++ + G +LV ++ +
Sbjct: 65 -GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123
Query: 181 NGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDC-----RSRVLHLD 235
+GSL ++ + EG ++A+ A L++LH + + + H D
Sbjct: 124 HGSLFDYLNRYTVTVEG-----------MIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 172
Query: 236 VKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-----GTRGYLAPEWILEQGVSE 290
+K +NIL+ +N ++D GL+ + D + I GT+ Y+APE +L+ ++
Sbjct: 173 LKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINM 229
Query: 291 K-------CDIYSYGMVLLEL 304
K DIY+ G+V E+
Sbjct: 230 KHFESFKRADIYAMGLVFWEI 250
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 109 LGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLL 162
+G G+ A V + IL+ G VAVK I+ + + +K FR EV + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
+ YLV E+ G + ++ R E ++R + A+ Y
Sbjct: 80 E-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-------KFR---QIVSAVQY 128
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H + ++H D+K EN+LLD + ++DFG S + + T G+ Y APE
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPE- 182
Query: 283 ILEQGVS---EKCDIYSYGMVLLELTGG 307
L QG + D++S G++L L G
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 24/213 (11%)
Query: 122 LSDGTSVAVKRINGEENGEKEFRSEVAAIASA-QHVNLVRLLGYCVVPGGPR---YLVYE 177
L DG A+KRI E ++E A + H N++RL+ YC+ G + +L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 178 FIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVK 237
F + G+L W + +G++ L+ D + + + + L +H + H D+K
Sbjct: 111 FFKRGTL--WNEIERLKDKGNF----LTEDQILWLLLGICRGLEAIHAKGYA---HRDLK 161
Query: 238 PENILLDENYRAVVSDFGL--SKLMSRDQSRCITTI------RGTRGYLAPEWILEQG-- 287
P NILL + + V+ D G + + SR T+ R T Y APE Q
Sbjct: 162 PTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHC 221
Query: 288 -VSEKCDIYSYGMVLLELTGGRRNVSLIEHGND 319
+ E+ D++S G VL + G ++ D
Sbjct: 222 VIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 26/248 (10%)
Query: 136 EENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRS 195
+E E + R E+ + +H N++R+ Y YL+ EF G L + R
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFD 112
Query: 196 EGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFG 255
E + ++A AL Y H +V+H D+KPEN+L+ ++DFG
Sbjct: 113 EQRSAT----------FMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFG 159
Query: 256 LSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIE 315
S + R + GT YL PE I + EK D++ G++ E G
Sbjct: 160 WSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
Query: 316 HGNDKSK--NKWQYFPKIVNEKMKE--GKLMEI-VDQRLTDEGGIDETQV----RRLVDV 366
H + N FP +++ K+ KL+ QRL +G ++ V RR++
Sbjct: 217 HTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPP 276
Query: 367 AFWCIQER 374
+ Q +
Sbjct: 277 VYQSTQSK 284
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 152 SAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYR 211
++ H LV L C + V E++ G L + + E H R+
Sbjct: 77 ASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH---------ARFY 126
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI 271
A +++ AL+YLH +++ D+K +N+LLD ++D+G+ K R +
Sbjct: 127 SA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXF 181
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKI 331
GT Y+APE + + D ++ G+++ E+ GR ++ ++ +N Y ++
Sbjct: 182 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 241
Query: 332 VNEK 335
+ EK
Sbjct: 242 ILEK 245
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 109 LGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLL 162
+G G+ A V + IL+ G VAVK I+ + + +K FR EV + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
+ YLV E+ G + ++ R E ++R + A+ Y
Sbjct: 80 E-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-------KFR---QIVSAVQY 128
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H + ++H D+K EN+LLD + ++DFG S + + T G+ Y APE
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPE- 182
Query: 283 ILEQGVS---EKCDIYSYGMVLLELTGG 307
L QG + D++S G++L L G
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ S+D F + G + L
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFL---SMDLKKFMDASALTG------IPLPLIKSYLF 111
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KPEN+L++ ++DFGL++ R + T+
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 169 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 136 EENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRS 195
+E E + R E+ A H N++RL Y YL+ E+ G L +
Sbjct: 63 KEGVEHQLRREIEIQAHLHHPNILRLYNY-FYDRRRIYLILEYAPRGELYKEL------- 114
Query: 196 EGHYSGGCLSWDLRYRVAI--DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSD 253
C ++D + I ++A AL Y H +V+H D+KPEN+LL ++D
Sbjct: 115 ----QKSC-TFDEQRTATIMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIAD 166
Query: 254 FGLSKLMS--RDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
FG S R ++ C GT YL PE I + +EK D++ G++ EL G
Sbjct: 167 FGWSVHAPSLRRKTMC-----GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVS--DFGLSKLMS 261
S L + A + + L LH ++R++H D+KPENILL + R+ + DFG S
Sbjct: 197 FSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---C 250
Query: 262 RDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ R T I+ +R Y APE IL D++S G +L EL G
Sbjct: 251 YEHQRVYTXIQ-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVS--DFGLSKLMS 261
S L + A + + L LH ++R++H D+KPENILL + R+ + DFG S
Sbjct: 197 FSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---C 250
Query: 262 RDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ R T I+ +R Y APE IL D++S G +L EL G
Sbjct: 251 YEHQRVYTXIQ-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +++ AL+YLH +++ D+K +N+LLD ++D+G+ K R +
Sbjct: 116 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFC 171
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIV 332
GT Y+APE + + D ++ G+++ E+ GR ++ ++ +N Y +++
Sbjct: 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
Query: 333 NEK 335
EK
Sbjct: 232 LEK 234
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 153 AQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV 212
QH N++ L G Y+V E ++ G L I SE S V
Sbjct: 73 GQHPNIITLKD-VYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA----------V 121
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENIL-LDE--NYRAV-VSDFGLSKLMSRDQSRCI 268
+ K + YLH V+H D+KP NIL +DE N ++ + DFG +K + R ++ +
Sbjct: 122 LFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLL 177
Query: 269 TTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T T ++APE + QG CDI+S G++L + G
Sbjct: 178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 26/248 (10%)
Query: 136 EENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRS 195
+E E + R E+ + +H N++R+ Y YL+ EF G L + R
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFD 112
Query: 196 EGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFG 255
E + ++A AL Y H +V+H D+KPEN+L+ ++DFG
Sbjct: 113 EQRSAT----------FMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFG 159
Query: 256 LSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIE 315
S + R + GT YL PE I + EK D++ G++ E G
Sbjct: 160 WSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
Query: 316 HGNDKSK--NKWQYFPKIVNEKMKE--GKLMEI-VDQRLTDEGGIDETQV----RRLVDV 366
H + N FP +++ K+ KL+ QRL +G ++ V RR++
Sbjct: 217 HTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPP 276
Query: 367 AFWCIQER 374
+ Q +
Sbjct: 277 VYQSTQSK 284
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 17/172 (9%)
Query: 136 EENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRS 195
+E E + R E+ + +H N++R+ Y YL+ EF G L + R
Sbjct: 55 KEGVEHQLRREIEIQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFD 113
Query: 196 EGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFG 255
E + ++A AL Y H +V+H D+KPEN+L+ ++DFG
Sbjct: 114 EQRSAT----------FMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFG 160
Query: 256 LSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
S + R + GT YL PE I + EK D++ G++ E G
Sbjct: 161 WSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +++ AL+YLH +++ D+K +N+LLD ++D+G+ K R +
Sbjct: 112 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFC 167
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIV 332
GT Y+APE + + D ++ G+++ E+ GR ++ ++ +N Y +++
Sbjct: 168 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
Query: 333 NEK 335
EK
Sbjct: 228 LEK 230
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ S+D F + G + L
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFL---SMDLKKFMDASALTG------IPLPLIKSYLF 113
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KPEN+L++ ++DFGL++ R + T+
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 171 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSRD-QSRCITTIRGTRGYLAPEWILEQG--- 287
+H DVKP+N+LLD++ ++DFG M+++ RC T + GT Y++PE + QG
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDG 248
Query: 288 -VSEKCDIYSYGMVLLELTGG 307
+CD +S G+ L E+ G
Sbjct: 249 YYGRECDWWSVGVFLYEMLVG 269
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 108 LLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRS-EVAAIASAQHVNLVRLLGYCV 166
++G+GS VF+ L + VA+K++ + K F++ E+ + +H N+V L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQD----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 167 VPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSG--GCLSWDLRYRVAIDVAKALSYLH 224
G + V+ N L+ ++ T R+ HY+ + L + ++L+Y+H
Sbjct: 103 SNGDKKDEVF---LNLVLE-YVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH 158
Query: 225 NDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
+ + H D+KP+N+LLD + + DFG +K++ + + +R Y APE I
Sbjct: 159 S---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXICSRYYRAPELI 213
Query: 284 L-EQGVSEKCDIYSYGMVLLELTGGR 308
+ DI+S G V+ EL G+
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 109 LGHGSSASVFKGI--LSDGTSVAVK--RINGEENGEKEFRSEVAAIASAQHVNLVRLLGY 164
LG G+ A+V+KG L+D VA+K R+ EE EV+ + +H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL--- 65
Query: 165 CVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI---DVAKALS 221
++ I +F + Y C + + V + + + L+
Sbjct: 66 -----------HDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPE 281
Y H R +VLH D+KP+N+L++E ++DFGL++ S ++ T Y P+
Sbjct: 115 YCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSI-PTKTYDNEVVTLWYRPPD 170
Query: 282 WIL-EQGVSEKCDIYSYGMVLLELTGGR 308
+L S + D++ G + E+ GR
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 112
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ LS+ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 113 LQGLSFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 168
Query: 277 YLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 232 LHLDVKPENILLDENYRAVVSDFGLSKLMSRD-QSRCITTIRGTRGYLAPEWILEQG--- 287
+H DVKP+N+LLD++ ++DFG M+++ RC T + GT Y++PE + QG
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDG 253
Query: 288 -VSEKCDIYSYGMVLLELTGG 307
+CD +S G+ L E+ G
Sbjct: 254 YYGRECDWWSVGVFLYEMLVG 274
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 21/216 (9%)
Query: 100 EATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASA 153
E +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 154 QHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 67 NHPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYL 116
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRG 273
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T
Sbjct: 117 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 172
Query: 274 TRGYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
T Y APE +L + S DI+S G + E+ R
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT 270
R ++V AL L+ ++H D+KPENILLD++ ++DFG S + D + +
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLRS 182
Query: 271 IRGTRGYLAPEWIL------EQGVSEKCDIYSYGMVLLELTGG 307
+ GT YLAPE I G ++ D++S G+++ L G
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD-QSRCITTIRG 273
+V AL +H+ +H DVKP+N+LLD++ ++DFG M+++ RC T + G
Sbjct: 181 EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 274 TRGYLAPEWILEQG----VSEKCDIYSYGMVLLELTGG 307
T Y++PE + QG +CD +S G+ L E+ G
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 33/173 (19%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
A+ YLH + ++H D+KPEN+LL +E+ ++DFG SK++ ++ + T+ GT
Sbjct: 265 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 319
Query: 276 GYLAPEWILE---QGVSEKCDIYSYGMVLLELTGG-------RRNVSLIEHGNDKSKNKW 325
YLAPE ++ G + D +S G++L G R VSL + + K+
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---KDQITSGKY 376
Query: 326 QYFPKI---VNEK-MKEGKLMEIVDQ--RLTDEGGI------DETQVRRLVDV 366
+ P++ V+EK + K + +VD R T E + DE R+ D+
Sbjct: 377 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 429
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 141 KEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGH-- 198
++ + E + +H ++V LL G Y+V+EF+ L F +R++
Sbjct: 71 EDLKREASICHMLKHPHIVELLE-TYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFV 126
Query: 199 YSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL--DENYRAV-VSDFG 255
YS S +R + +AL Y H++ ++H DVKPEN+LL EN V + DFG
Sbjct: 127 YSEAVASHYMR-----QILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFG 178
Query: 256 LSKLMSRDQSRCITTIR-GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
++ + +S + R GT ++APE + + + D++ G++L L G
Sbjct: 179 VA--IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 108 LLGHGSSASVFKGILS--DGT--SVAVKRINGE---ENGEKEFRSEVAAIASAQHVNLVR 160
+LG G SV + L DG+ VAVK + + + +EF E A + H ++ +
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 161 LLGYCV---------VPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYR 211
L+G + +P ++ F+++G L H SR E ++ L R
Sbjct: 90 LVGVSLRSRAKGRLPIP----MVILPFMKHGDL-HAFLLASRIGENPFN---LPLQTLVR 141
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLS-KLMSRDQSRCITT 270
+D+A + YL + +H D+ N +L E+ V+DFGLS K+ S D R
Sbjct: 142 FMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLE-LTGGRRNVSLIEHG 317
+ +LA E + + + D++++G+ + E +T G+ + IE+
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA 246
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 33/173 (19%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILL---DENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
A+ YLH + ++H D+KPEN+LL +E+ ++DFG SK++ ++ + T+ GT
Sbjct: 251 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 305
Query: 276 GYLAPEWILE---QGVSEKCDIYSYGMVLLELTGG-------RRNVSLIEHGNDKSKNKW 325
YLAPE ++ G + D +S G++L G R VSL + + K+
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---KDQITSGKY 362
Query: 326 QYFPKI---VNEK-MKEGKLMEIVDQ--RLTDEGGI------DETQVRRLVDV 366
+ P++ V+EK + K + +VD R T E + DE R+ D+
Sbjct: 363 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 415
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV--AIDVAKALSYLHNDCRSR 230
+ V E++ G L + I C +DL A ++ L +LH+
Sbjct: 94 FFVMEYLNGGDLMYHI------------QSCHKFDLSRATFYAAEIILGLQFLHS---KG 138
Query: 231 VLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSE 290
+++ D+K +NILLD++ ++DFG+ K ++ GT Y+APE +L Q +
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NXFCGTPDYIAPEILLGQKYNH 197
Query: 291 KCDIYSYGMVLLELTGGRRNVSLIEHGNDKSK 322
D +S+G++L E+ G+ HG D+ +
Sbjct: 198 SVDWWSFGVLLYEMLIGQSPF----HGQDEEE 225
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV--AIDVAKALSYLHNDCRSR 230
+ V E++ G L + I C +DL A ++ L +LH+
Sbjct: 95 FFVMEYLNGGDLMYHI------------QSCHKFDLSRATFYAAEIILGLQFLHS---KG 139
Query: 231 VLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSE 290
+++ D+K +NILLD++ ++DFG+ K ++ GT Y+APE +L Q +
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NEFCGTPDYIAPEILLGQKYNH 198
Query: 291 KCDIYSYGMVLLELTGGRRNVSLIEHGNDKSK 322
D +S+G++L E+ G+ HG D+ +
Sbjct: 199 SVDWWSFGVLLYEMLIGQSPF----HGQDEEE 226
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI 271
+AID L Y+H D +KP+N+LLD N ++DFG M+ D + +
Sbjct: 202 LAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 272 RGTRGYLAPEWI--LEQGVSE---KCDIYSYGMVLLELTGGRRNV---SLIE-HGNDKSK 322
GT Y++PE + +E G+ + +CD +S G+ + E+ G SL+E +G +
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 323 NKWQYFPKIVNEKMKEGK 340
+ FP V + +E K
Sbjct: 313 EERFQFPSHVTDVSEEAK 330
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI 271
+AID L Y+H D +KP+N+LLD N ++DFG M+ D + +
Sbjct: 186 LAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 272 RGTRGYLAPEWI--LEQGVSE---KCDIYSYGMVLLELTGGRRNV---SLIE-HGNDKSK 322
GT Y++PE + +E G+ + +CD +S G+ + E+ G SL+E +G +
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 323 NKWQYFPKIVNEKMKEGK 340
+ FP V + +E K
Sbjct: 297 EERFQFPSHVTDVSEEAK 314
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 21/216 (9%)
Query: 100 EATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASA 153
E +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 154 QHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 67 NHPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYL 116
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRG 273
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T
Sbjct: 117 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 172
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
T Y APE +L + S DI+S G + E+ R
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKD---FMDASALTG------IPLPLIKSYLF 110
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KPEN+L++ ++DFGL++ R + T+
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 112
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 113 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 168
Query: 277 YLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 102 TDNFQ--ALLGHGSSASVFKGIL-SDGTSVAVKRINGEENGEKEFRS--EVAAIASAQHV 156
+ +FQ +LLG G+ V G VA+K+I + R+ E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 157 NLVRLLGY----CVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV 212
N++ + Y++ E +Q H + T S+ H ++Y +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDL--HRVISTQMLSDDH---------IQYFI 118
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD--------- 263
+A+ LH S V+H D+KP N+L++ N V DFGL++++
Sbjct: 119 -YQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 264 QSRCITTIRGTRGYLAPEWILEQG-VSEKCDIYSYGMVLLEL 304
Q +T TR Y APE +L S D++S G +L EL
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 55/242 (22%)
Query: 92 KFRSKELEEAT----DNFQALLGHGSSA-----SVFKGILSDGTSVAVKRIN----GEEN 138
+F S E+ ++T +Q L GS A + F +L G +VAVK+++ + +
Sbjct: 9 QFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTH 66
Query: 139 GEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPR------YLVYEFIQ-------NGSLD 185
++ +R E+ + H N++ LL P YLV E + + LD
Sbjct: 67 AKRAYR-ELVLLKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD 124
Query: 186 HWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDE 245
H R S Y C + +LH+ + ++H D+KP NI++
Sbjct: 125 H-----ERMSYLLYQMLC---------------GIKHLHS---AGIIHRDLKPSNIVVKS 161
Query: 246 NYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELT 305
+ + DFGL++ + +T TR Y APE IL G + DI+S G ++ EL
Sbjct: 162 DCTLKILDFGLARTACTN--FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
Query: 306 GG 307
G
Sbjct: 220 KG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G+++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 102 TDNFQ--ALLGHGSSASVFKGIL-SDGTSVAVKRINGEENGEKEFRS--EVAAIASAQHV 156
+ +FQ +LLG G+ V G VA+K+I + R+ E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 157 NLVRLLGY----CVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV 212
N++ + Y++ E +Q H + T S+ H ++Y +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDL--HRVISTQMLSDDH---------IQYFI 118
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD--------- 263
+A+ LH S V+H D+KP N+L++ N V DFGL++++
Sbjct: 119 -YQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 264 QSRCITTIRGTRGYLAPEWILEQG-VSEKCDIYSYGMVLLEL 304
Q +T TR Y APE +L S D++S G +L EL
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G+++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 107 ALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRSEVAAI--ASAQHV 156
LLG G SV+ GI +SD VA+K + GE EV + S+
Sbjct: 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
++RLL + P L+ E + D + F T R G L +L V
Sbjct: 70 GVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GALQEELARSFFWQV 119
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
+A+ + HN VLH D+K ENIL+D N + + DFG L+ + T GTR
Sbjct: 120 LEAVRHCHN---XGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTR 173
Query: 276 GYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
Y PEWI + ++S G++L ++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT 270
R ++V AL L+ ++H D+KPENILLD++ ++DFG S + D +
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLRE 182
Query: 271 IRGTRGYLAPEWIL------EQGVSEKCDIYSYGMVLLELTGG 307
+ GT YLAPE I G ++ D++S G+++ L G
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 29/208 (13%)
Query: 109 LGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLL 162
+G G+ A V + IL+ G VA+K I+ + + +K FR EV + H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLF 80
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
+ YL+ E+ G + ++ R E ++R + A+ Y
Sbjct: 81 E-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-------KFR---QIVSAVQY 129
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H + R++H D+K EN+LLD + ++DFG S + + G Y APE
Sbjct: 130 CH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPE- 183
Query: 283 ILEQGVS---EKCDIYSYGMVLLELTGG 307
L QG + D++S G++L L G
Sbjct: 184 -LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 109 LGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLL 162
+G G+ A V + IL+ G VAV+ I+ + + +K FR EV + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
+ YLV E+ G + ++ R E ++R + A+ Y
Sbjct: 80 E-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-------KFR---QIVSAVQY 128
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H + ++H D+K EN+LLD + ++DFG S + + T G+ Y APE
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPE- 182
Query: 283 ILEQGVS---EKCDIYSYGMVLLELTGG 307
L QG + D++S G++L L G
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 109 LGHGSSASVFKGIL---SDGTSVAVKRI-NGEENGE-KEFRSEVAAIASAQHVNLVRLLG 163
LG G+ SV +G+ VA+K + G E + +E E + + +VRL+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C LV E G L F +R E S +L ++V++ + YL
Sbjct: 78 VCQAEA--LMLVMEMAGGGPLHK--FLVGKREEIPVSNVA---ELLHQVSM----GMKYL 126
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRG--TRGYLAPE 281
+H D+ N+LL + A +SDFGLSK + D S G + APE
Sbjct: 127 EE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
Query: 282 WILEQGVSEKCDIYSYGMVLLE-LTGGRR 309
I + S + D++SYG+ + E L+ G++
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALSYGQK 212
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT 270
R ++V AL L+ ++H D+KPENILLD++ ++DFG S + D +
Sbjct: 118 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLRE 169
Query: 271 IRGTRGYLAPEWIL------EQGVSEKCDIYSYGMVLLELTGG 307
+ GT YLAPE I G ++ D++S G+++ L G
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 111
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVT 167
Query: 275 RGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 112
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 113 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 168
Query: 277 YLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 107 ALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRSEVAAI--ASAQHV 156
LLG G SV+ GI +SD VA+K + GE EV + S+
Sbjct: 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
++RLL + P L+ E + D + F T R G L +L V
Sbjct: 70 GVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GALQEELARSFFWQV 119
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
+A+ + HN VLH D+K ENIL+D N + + DFG L+ + T GTR
Sbjct: 120 LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTR 173
Query: 276 GYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
Y PEWI + ++S G++L ++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 111
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 112 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 167
Query: 277 YLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 33/222 (14%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVP 168
+G G V+ G G VAVK E +E+ +H N++ + +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 169 GGP---RYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHN 225
G YL+ ++ +NGSL ++ T+ ++ ++A L +LH
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKSTTLDAKS-----------MLKLAYSSVSGLCHLHT 152
Query: 226 DC-----RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC---ITTIRGTRGY 277
+ + + H D+K +NIL+ +N ++D GL+ D + T GT+ Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 278 LAPEWILEQGVSEK-------CDIYSYGMVLLELTGGRRNVS 312
+ PE +L++ ++ D+YS+G++L E+ RR VS
Sbjct: 213 MPPE-VLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVS 251
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 26/116 (22%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILL---------------DE----NYRAVV 251
++A + K++++LH++ ++ H D+KPENIL DE N V
Sbjct: 122 KMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178
Query: 252 SDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
DFG + S T+ R Y APE IL G S+ CD++S G +L+E G
Sbjct: 179 VDFGSATYDDEHHS----TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 107 ALLGHGSSASVFKGI-LSDGTSVAVKRIN-------GEENGEKEFRSEVAAI--ASAQHV 156
LLG G SV+ GI +SD VA+K + GE EV + S+
Sbjct: 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
++RLL + P L+ E + D + F T R G L +L V
Sbjct: 70 GVIRLLDWFERPDS-FVLILERPEPVQ-DLFDFITER--------GALQEELARSFFWQV 119
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAV-VSDFGLSKLMSRDQSRCITTIRGTR 275
+A+ + HN VLH D+K ENIL+D N + + DFG L+ + T GTR
Sbjct: 120 LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTR 173
Query: 276 GYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGG 307
Y PEWI + ++S G++L ++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 111
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 112 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 167
Query: 277 YLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 67 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 116
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 117 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 172
Query: 277 YLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 112
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 113 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 168
Query: 277 YLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ S+D F + G + L
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFL---SMDLKDFMDASALTG------IPLPLIKSYLF 112
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 113 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 170 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDEN--YRAVVSDFGLSK---LMSRDQSRCITT 270
+ AL YLHN + H D+KPEN L N + + DFGLSK ++ + +TT
Sbjct: 177 IFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233
Query: 271 IRGTRGYLAPEWI--LEQGVSEKCDIYSYGMVLLELTGG 307
GT ++APE + + KCD +S G++L L G
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENIL-LDE--NYRAV-VSDFGLSKLMSRDQSRC 267
V + K + YLH V+H D+KP NIL +DE N ++ + DFG +K + R ++
Sbjct: 121 VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGL 176
Query: 268 ITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLE-LTG 306
+ T T ++APE + QG CDI+S G++L LTG
Sbjct: 177 LXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH+ V++ D+K EN++LD++ ++DFGL K D + + GT
Sbjct: 113 EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGT 168
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH+ V++ D+K EN++LD++ ++DFGL K D + + GT
Sbjct: 118 EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGT 173
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ S+D F + G + L
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFL---SMDLKDFMDASALTG------IPLPLIKSYLF 113
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 171 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 32/129 (24%)
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENY--RAVVS------------------ 252
I++ KAL+YL + + H D+KPENILLD+ Y +++++
Sbjct: 143 CIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKST 199
Query: 253 -----DFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
DFG + S +I TR Y APE IL G D++S+G VL EL G
Sbjct: 200 GIKLIDFGCATFKSDYHG----SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
Query: 308 RRNVSLIEH 316
EH
Sbjct: 256 SLLFRTHEH 264
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y V E++ G L + I + E A +++ L +LH + ++
Sbjct: 96 YFVMEYVNGGDLMYHIQQVGKFKEPQ----------AVFYAAEISIGLFFLH---KRGII 142
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT--IRGTRGYLAPEWILEQGVSE 290
+ D+K +N++LD ++DFG+ K D +TT GT Y+APE I Q +
Sbjct: 143 YRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 291 KCDIYSYGMVLLELTGGR 308
D ++YG++L E+ G+
Sbjct: 200 SVDWWAYGVLLYEMLAGQ 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 25/230 (10%)
Query: 83 LRKVAGVPIKFRSKELEEATDNFQALLGHGSSASVF-KGILSDGTS--VAVKRINGEENG 139
L + G P F + L++ D + GH S++ +DGT VAVK + +
Sbjct: 18 LFQGPGDPTVFHKRYLKKIRDLGE---GHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP 74
Query: 140 EKE--FRSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSE 196
+ ++ E+ + + H ++++ G C G LV E++ GSL ++ R S
Sbjct: 75 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSI 131
Query: 197 GHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGL 256
G L+ L + A + + ++YLH +H D+ N+LLD + + DFGL
Sbjct: 132 G------LAQLLLF--AQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGL 180
Query: 257 SKLMSRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
+K + G + APE + E D++S+G+ L EL
Sbjct: 181 AKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 129/318 (40%), Gaps = 71/318 (22%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK---EFRSEVAAIASAQHVN--LVRLLG 163
+G G S+ VF+ + A+K +N EE + +R+E+A + Q + ++RL
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
Y + +Y ++ G++D SW L+ + +ID + SY
Sbjct: 96 YEIT----DQYIYMVMECGNID-----------------LNSW-LKKKKSIDPWERKSYW 133
Query: 223 ------LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTR 275
+H + ++H D+KP N L+ + ++ DFG++ M D + + + GT
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTV 192
Query: 276 GYLAPEWILEQGVSEK-----------CDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNK 324
Y+ PE I + S + D++S G +L +T G+
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------------- 238
Query: 325 WQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARV 384
F +I+N+ KL I+D E + + L DV C++ + R S+ +
Sbjct: 239 ---FQQIINQI---SKLHAIIDP--NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290
Query: 385 VEMLEGRVAVDDPPDTQM 402
+ V + P QM
Sbjct: 291 --LAHPYVQIQTHPVNQM 306
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH+ V++ D+K EN++LD++ ++DFGL K D + + GT
Sbjct: 113 EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGT 168
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
++ AL YLH+ V++ D+K EN++LD++ ++DFGL K D + + GT
Sbjct: 113 EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGT 168
Query: 275 RGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGR 308
YLAPE + + D + G+V+ E+ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 39/246 (15%)
Query: 103 DNFQAL--LGHGSSASVFKG-ILSDGTSVAVKRING----EENGEKEFRSEVAAIASAQH 155
DNF+ + LG GS V + G AVK + +++ + +E ++ A++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV-AI 214
+ L C + V EF+ G L I + R E R R A
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA-----------RARFYAA 131
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC----ITT 270
++ AL +LH+ +++ D+K +N+LLD ++DFG+ K + C T
Sbjct: 132 EIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK-----EGICNGVTTAT 183
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPK 330
GT Y+APE + E D ++ G++L E+ G H +++N+ F
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG--------HAPFEAENEDDLFEA 235
Query: 331 IVNEKM 336
I+N+++
Sbjct: 236 ILNDEV 241
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGT 274
+V AL +H+ ++H DVKP+N+LLD++ ++DFG M T GT
Sbjct: 182 EVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGT 238
Query: 275 RGYLAPEWILEQG----VSEKCDIYSYGMVLLELTGG 307
Y++PE + QG +CD +S G+ L E+ G
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 111
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KPEN+L++ ++DFGL++ R + T+
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 169 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 109 LGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEVAAIASAQHVNLVRLL 162
+G G V +GI + +VA+K ++ ++F E + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV--AIDVAKAL 220
G V+ P +++ E G L F R+ S DL + A ++ AL
Sbjct: 78 G--VITENPVWIIMELCTLGELRS--FLQVRK---------FSLDLASLILYAYQLSTAL 124
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL + R +H D+ N+L+ N + DFGLS+ M T + ++G L
Sbjct: 125 AYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TXXKASKGKLPI 176
Query: 281 EWILEQGV-----SEKCDIYSYGMVLLEL 304
+W+ + + + D++ +G+ + E+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI-DVAKALSYLHNDCRSRV 231
YLV+E ++ GS+ I RR H++ +L V + DVA AL +LHN +
Sbjct: 87 YLVFEKMRGGSILSHIH--KRR---HFN------ELEASVVVQDVASALDFLHN---KGI 132
Query: 232 LHLDVKPENILLDENYRAV---VSDFGLSK--LMSRDQSRCIT----TIRGTRGYLAPEW 282
H D+KPENIL + + + DFGL ++ D S T T G+ Y+APE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 283 ILEQGVSE-------KCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN-- 333
+ + SE +CD++S G++L L G + G+D ++ + P N
Sbjct: 193 V--EAFSEEASIYDKRCDLWSLGVILYILLSGYPPF-VGRCGSDCGWDRGEACPACQNML 249
Query: 334 -EKMKEGK 340
E ++EGK
Sbjct: 250 FESIQEGK 257
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 129/318 (40%), Gaps = 71/318 (22%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK---EFRSEVAAIASAQHVN--LVRLLG 163
+G G S+ VF+ + A+K +N EE + +R+E+A + Q + ++RL
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
Y + +Y ++ G++D SW L+ + +ID + SY
Sbjct: 77 YEIT----DQYIYMVMECGNID-----------------LNSW-LKKKKSIDPWERKSYW 114
Query: 223 ------LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTR 275
+H + ++H D+KP N L+ + ++ DFG++ M D + + + GT
Sbjct: 115 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTV 173
Query: 276 GYLAPEWILEQGVSEK-----------CDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNK 324
Y+ PE I + S + D++S G +L +T G+
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------------- 219
Query: 325 WQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARV 384
F +I+N+ KL I+D E + + L DV C++ + R S+ +
Sbjct: 220 ---FQQIINQI---SKLHAIIDP--NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 271
Query: 385 VEMLEGRVAVDDPPDTQM 402
+ V + P QM
Sbjct: 272 --LAHPYVQIQTHPVNQM 287
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM---SRDQSRCITTIRGT 274
+ L Y+H+ ++V+H D+KP N+L++EN + DFG+++ + + +T T
Sbjct: 170 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 275 RGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGRR 309
R Y APE +L ++ D++S G + E+ R+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 112
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KPEN+L++ ++DFGL++ R + T+
Sbjct: 113 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 170 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 129/318 (40%), Gaps = 71/318 (22%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK---EFRSEVAAIASAQHVN--LVRLLG 163
+G G S+ VF+ + A+K +N EE + +R+E+A + Q + ++RL
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
Y + +Y ++ G++D SW L+ + +ID + SY
Sbjct: 80 YEIT----DQYIYMVMECGNID-----------------LNSW-LKKKKSIDPWERKSYW 117
Query: 223 ------LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTR 275
+H + ++H D+KP N L+ + ++ DFG++ M D + + + GT
Sbjct: 118 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTV 176
Query: 276 GYLAPEWILEQGVSEK-----------CDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNK 324
Y+ PE I + S + D++S G +L +T G+
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------------- 222
Query: 325 WQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARV 384
F +I+N+ KL I+D E + + L DV C++ + R S+ +
Sbjct: 223 ---FQQIINQI---SKLHAIIDP--NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 274
Query: 385 VEMLEGRVAVDDPPDTQM 402
+ V + P QM
Sbjct: 275 --LAHPYVQIQTHPVNQM 290
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVV---SDFGLSKLMSRD--QSRCIT 269
D+ A+ +LH+ + H DVKPEN+L + V +DFG +K +++ Q+ C T
Sbjct: 136 DIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 192
Query: 270 TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y+APE + + + CD++S G+++ L G
Sbjct: 193 PY-----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM---SRDQSRCITTIRGT 274
+ L Y+H+ ++V+H D+KP N+L++EN + DFG+++ + + +T T
Sbjct: 169 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 275 RGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGRR 309
R Y APE +L ++ D++S G + E+ R+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVV---SDFGLSKLMSRD--QSRCIT 269
D+ A+ +LH+ + H DVKPEN+L + V +DFG +K +++ Q+ C T
Sbjct: 117 DIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 173
Query: 270 TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
Y+APE + + + CD++S G+++ L G
Sbjct: 174 PY-----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 204 LSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVS--DFGLSKLMS 261
S L + A + + L LH ++R++H D+KPENILL + R+ + DFG S
Sbjct: 197 FSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---C 250
Query: 262 RDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ R I+ +R Y APE IL D++S G +L EL G
Sbjct: 251 YEHQRVYXXIQ-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y V E++ G L + I R E H A ++A L +L + ++
Sbjct: 97 YFVMEYVNGGDLMYHIQQVGRFKEPH----------AVFYAAEIAIGLFFLQS---KGII 143
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT--IRGTRGYLAPEWILEQGVSE 290
+ D+K +N++LD ++DFG+ K D +TT GT Y+APE I Q +
Sbjct: 144 YRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 291 KCDIYSYGMVLLELTGGR 308
D +++G++L E+ G+
Sbjct: 201 SVDWWAFGVLLYEMLAGQ 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 34/222 (15%)
Query: 102 TDNFQ--ALLGHGSSASVFKGIL-SDGTSVAVKRINGEENGEKEFRS--EVAAIASAQHV 156
+ +FQ +LLG G+ V G VA+K+I + R+ E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 157 NLVRLLGY----CVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV 212
N++ + Y++ E +Q H + T S+ H ++Y +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDL--HRVISTQMLSDDH---------IQYFI 118
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRD--------- 263
+A+ LH S V+H D+KP N+L++ N V DFGL++++
Sbjct: 119 -YQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 264 QSRCITTIRGTRGYLAPEWILEQG-VSEKCDIYSYGMVLLEL 304
Q + TR Y APE +L S D++S G +L EL
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 130/319 (40%), Gaps = 71/319 (22%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK---EFRSEVAAIAS-AQHVN-LVRLLG 163
+G G S+ VF+ + A+K +N EE + +R+E+A + QH + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
Y + +Y ++ G++D SW L+ + +ID + SY
Sbjct: 124 YEIT----DQYIYMVMECGNID-----------------LNSW-LKKKKSIDPWERKSYW 161
Query: 223 ------LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTR 275
+H + ++H D+KP N L+ + ++ DFG++ M D + + + GT
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTV 220
Query: 276 GYLAPEWILEQGVSEK-----------CDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNK 324
Y+ PE I + S + D++S G +L +T G+
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------------- 266
Query: 325 WQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARV 384
F +I+N+ KL I+D E + + L DV C++ + R S+ +
Sbjct: 267 ---FQQIINQI---SKLHAIIDP--NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 318
Query: 385 VEMLEGRVAVDDPPDTQMV 403
+ V + P QM
Sbjct: 319 --LAHPYVQIQTHPVNQMA 335
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 109 LGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLL 162
+G G+ A V + IL+ G VAVK I+ + + +K FR EV + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
+ YLV E+ G + ++ R E ++R + A+ Y
Sbjct: 80 E-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-------KFR---QIVSAVQY 128
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H + ++H D+K EN+LLD + ++DFG S + + G Y APE
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE- 182
Query: 283 ILEQGVS---EKCDIYSYGMVLLELTGG 307
L QG + D++S G++L L G
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 129/318 (40%), Gaps = 71/318 (22%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK---EFRSEVAAIASAQHVN--LVRLLG 163
+G G S+ VF+ + A+K +N EE + +R+E+A + Q + ++RL
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
Y + +Y ++ G++D SW L+ + +ID + SY
Sbjct: 76 YEIT----DQYIYMVMECGNID-----------------LNSW-LKKKKSIDPWERKSYW 113
Query: 223 ------LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTR 275
+H + ++H D+KP N L+ + ++ DFG++ M D + + + GT
Sbjct: 114 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTV 172
Query: 276 GYLAPEWILEQGVSEK-----------CDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNK 324
Y+ PE I + S + D++S G +L +T G+
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------------- 218
Query: 325 WQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARV 384
F +I+N+ KL I+D E + + L DV C++ + R S+ +
Sbjct: 219 ---FQQIINQI---SKLHAIIDP--NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 270
Query: 385 VEMLEGRVAVDDPPDTQM 402
+ V + P QM
Sbjct: 271 --LAHPYVQIQTHPVNQM 286
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 47/224 (20%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK---EFRSEVAAIAS-AQHVN-LVRLLG 163
+G G S+ VF+ + A+K +N EE + +R+E+A + QH + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
Y + +Y ++ G++D SW L+ + +ID + SY
Sbjct: 124 YEIT----DQYIYMVMECGNID-----------------LNSW-LKKKKSIDPWERKSYW 161
Query: 223 ------LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTR 275
+H + ++H D+KP N L+ + ++ DFG++ M D + + + GT
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTV 220
Query: 276 GYLAPEWILEQGVSEK-----------CDIYSYGMVLLELTGGR 308
Y+ PE I + S + D++S G +L +T G+
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKTFMDASALTG------IPLPLIKSYLF 113
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 171 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVL 232
Y V E++ G L + I R E H A ++A L +L + ++
Sbjct: 418 YFVMEYVNGGDLMYHIQQVGRFKEPH----------AVFYAAEIAIGLFFLQS---KGII 464
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITT--IRGTRGYLAPEWILEQGVSE 290
+ D+K +N++LD ++DFG+ K D +TT GT Y+APE I Q +
Sbjct: 465 YRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 291 KCDIYSYGMVLLELTGGR 308
D +++G++L E+ G+
Sbjct: 522 SVDWWAFGVLLYEMLAGQ 539
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 109 LGHGSSASVFKGILSD-GTSVAVKRINGEENG---EKEFRSEVAAIASAQHVNLVRLLGY 164
+G GS VFK D G VA+K+ E+ +K E+ + +H NLV LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE- 69
Query: 165 CVVPGGPR-YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
V R +LV+E+ DH + R Y G + L + +A+++
Sbjct: 70 -VFRRKRRLHLVFEYC-----DHTVLHELDR----YQRG-VPEHLVKSITWQTLQAVNFC 118
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
H + +H DVKPENIL+ ++ + DFG ++L++ + TR Y +PE +
Sbjct: 119 H---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELL 174
Query: 284 L-EQGVSEKCDIYSYGMVLLELTGG 307
+ + D+++ G V EL G
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 139 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 193
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G ++ E+ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL----ARHTDDEMTGYVATR 191
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 29/208 (13%)
Query: 109 LGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLL 162
+G G+ A V + IL+ G VAVK I+ + + +K FR EV + H N+V+L
Sbjct: 15 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 72
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
+ YLV E+ G + ++ E ++R + A+ Y
Sbjct: 73 E-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARA-------KFR---QIVSAVQY 121
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H + ++H D+K EN+LLD + ++DFG S + + T G+ Y APE
Sbjct: 122 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPE- 175
Query: 283 ILEQGVS---EKCDIYSYGMVLLELTGG 307
L QG + D++S G++L L G
Sbjct: 176 -LFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 145 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL----ARHTDDEMTGYVATR 197
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R + +T TR
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTADEMTGYVATR 193
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL----ARHTDDEMTGYVATR 191
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 30/222 (13%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEV 147
R E++ +G G V +GI + +VA+K ++ ++F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 148 AAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
+ H ++V+L+G V+ P +++ E G L F R+ YS S
Sbjct: 63 LTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRS--FLQVRK----YSLDLASLI 114
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC 267
L A ++ AL+YL + R +H D+ N+L+ N + DFGLS+ M
Sbjct: 115 L---YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---- 164
Query: 268 ITTIRGTRGYLAPEWILEQGV-----SEKCDIYSYGMVLLEL 304
T + ++G L +W+ + + + D++ +G+ + E+
Sbjct: 165 -TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R + +T TR
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTADEMTGYVATR 193
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 109 LGHGSSASVFKGILSDGTS-VAVKRINGEENGEKEFRS---EVAAIASAQHVNLVRLLGY 164
+G G+ +VFK + VA+KR+ +++ E S E+ + +H N+VRL +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL--H 67
Query: 165 CVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
V+ + LV+EF ++ G L ++ + K L +
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYF----------DSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
H+ VLH D+KP+N+L++ N ++DFGL++ RC + T Y P+ +
Sbjct: 118 HS---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVL 173
Query: 284 LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGND 319
+ S D++S G + EL R + GND
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLF---PGND 207
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R + +T TR
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTADEMTGYVATR 193
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 109 LGHGSSASV-FKGILSDGTSVAVKRIN--GEENGEK--EFRSEVAAIASAQHVNLVRLLG 163
+GHGS +V F + + VA+K+++ G+++ EK + EV + +H N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C + +LV E+ + D E + V + L+YL
Sbjct: 83 -CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA----------VTHGALQGLAYL 131
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
H+ ++H DVK NILL E + DFG + +M+ GT ++APE I
Sbjct: 132 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFVGTPYWMAPEVI 183
Query: 284 L---EQGVSEKCDIYSYGMVLLELT 305
L E K D++S G+ +EL
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGL----ARHTDDEMTGYVATR 192
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 125 GTSVAVKRINGEENGEKE-FRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGS 183
G + A K + +KE R E+ ++ +H LV L ++YEF+ G
Sbjct: 76 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD-AFEDDNEMVMIYEFMSGGE 134
Query: 184 LDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL 243
L + ++ H +S D V K L ++H + +HLD+KPENI+
Sbjct: 135 L------FEKVADEH---NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMF 182
Query: 244 DENYRAVVS--DFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVL 301
+ DFGL+ + QS +TT GT + APE + V D++S G++
Sbjct: 183 TTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYYTDMWSVGVLS 240
Query: 302 LELTGG 307
L G
Sbjct: 241 YILLSG 246
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 53/249 (21%)
Query: 85 KVAGVPIKFRSKELEEATDNF---QALLGHGSSASV-FKGILSDGTSVAVKR--INGEEN 138
++A +P E++ N + +LG+GSS +V F+G G VAVKR I+ +
Sbjct: 2 RIANIP------NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDI 54
Query: 139 GEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGH 198
E + S H N++R YC R+L Y ++ +L+ S+ +
Sbjct: 55 ALMEIK---LLTESDDHPNVIRY--YCSETTD-RFL-YIALELCNLNLQDLVESK----N 103
Query: 199 YSGGCLSWDLRYR---VAIDVAKALSYLHNDCRSRVLHLDVKPENILLD----------- 244
S L Y + +A +++LH+ +++H D+KP+NIL+
Sbjct: 104 VSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQT 160
Query: 245 --ENYRAVVSDFGLSKLMSRDQSRCITTIR---GTRGYLAPEWILEQG-------VSEKC 292
EN R ++SDFGL K + QS T + GT G+ APE + E ++
Sbjct: 161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI 220
Query: 293 DIYSYGMVL 301
DI+S G V
Sbjct: 221 DIFSMGCVF 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 30/222 (13%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEV 147
R E++ +G G V +GI + +VA+K ++ ++F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 148 AAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
+ H ++V+L+G V+ P +++ E G L F R+ YS S
Sbjct: 63 LTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRS--FLQVRK----YSLDLASLI 114
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC 267
L A ++ AL+YL + R +H D+ N+L+ N + DFGLS+ M
Sbjct: 115 L---YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---- 164
Query: 268 ITTIRGTRGYLAPEWILEQGV-----SEKCDIYSYGMVLLEL 304
T + ++G L +W+ + + + D++ +G+ + E+
Sbjct: 165 -TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGL----ARHTDDEMTGYVATR 188
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 109 LGHGSSASV-FKGILSDGTSVAVKRIN--GEENGEK--EFRSEVAAIASAQHVNLVRLLG 163
+GHGS +V F + + VA+K+++ G+++ EK + EV + +H N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
C + +LV E+ + D E + V + L+YL
Sbjct: 122 -CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA----------VTHGALQGLAYL 170
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
H+ ++H DVK NILL E + DFG + +M+ GT ++APE I
Sbjct: 171 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFVGTPYWMAPEVI 222
Query: 284 L---EQGVSEKCDIYSYGMVLLELT 305
L E K D++S G+ +EL
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 105 FQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGY 164
Q +G G V++G G VAVK + E +E+ +H N++ +
Sbjct: 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 165 CVVPGGPR---YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
G +LV ++ ++GSL ++ + EG ++A+ A L+
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-----------MIKLALSTASGLA 114
Query: 222 YLHNDC-----RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR---- 272
+LH + + + H D+K +NIL+ +N ++D GL+ + D + I
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 172
Query: 273 -GTRGYLAPEWILEQGVSEK-------CDIYSYGMVLLELT 305
GT+ Y+APE +L+ ++ K DIY+ G+V E+
Sbjct: 173 VGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 110
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 109 LGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEVAAIASAQHVNLVRLL 162
+G G V +GI + +VA+K ++ ++F E + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
G V+ P +++ E G L F R+ YS S L A ++ AL+Y
Sbjct: 75 G--VITENPVWIIMELCTLGELRS--FLQVRK----YSLDLASLIL---YAYQLSTALAY 123
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
L + R +H D+ N+L+ N + DFGLS+ M T + ++G L +W
Sbjct: 124 LES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKW 175
Query: 283 ILEQGV-----SEKCDIYSYGMVLLEL 304
+ + + + D++ +G+ + E+
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEI 202
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 128/318 (40%), Gaps = 71/318 (22%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK---EFRSEVAAIASAQHVN--LVRLLG 163
+G G S+ VF+ + A+K +N EE + +R+E+A + Q + ++RL
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
Y + +Y ++ G++D SW L+ + +ID + SY
Sbjct: 96 YEIT----DQYIYMVMECGNID-----------------LNSW-LKKKKSIDPWERKSYW 133
Query: 223 ------LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTR 275
+H + ++H D+KP N L+ + ++ DFG++ M D + + GT
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTV 192
Query: 276 GYLAPEWILEQGVSEK-----------CDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNK 324
Y+ PE I + S + D++S G +L +T G+
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------------- 238
Query: 325 WQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARV 384
F +I+N+ KL I+D E + + L DV C++ + R S+ +
Sbjct: 239 ---FQQIINQI---SKLHAIIDP--NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290
Query: 385 VEMLEGRVAVDDPPDTQM 402
+ V + P QM
Sbjct: 291 --LAHPYVQIQTHPVNQM 306
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 25/247 (10%)
Query: 74 RELRIEYSFLRKVAGVPIKFRSKELEEATDNF---QALLGHGSSASVFKGIL---SDGTS 127
R + ++ S P + + K+L DN LG G+ SV +G+
Sbjct: 306 RPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQID 365
Query: 128 VAVKRI-NGEENGE-KEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLD 185
VA+K + G E + +E E + + +VRL+G C LV E G L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA--LMLVMEMAGGGPLH 423
Query: 186 HWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDE 245
++ +R E S +L ++V++ + YL +H ++ N+LL
Sbjct: 424 KFL--VGKREEIPVSNVA---ELLHQVSM----GMKYLEE---KNFVHRNLAARNVLLVN 471
Query: 246 NYRAVVSDFGLSKLMSRDQSRCITTIRG--TRGYLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ A +SDFGLSK + D S G + APE I + S + D++SYG+ + E
Sbjct: 472 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 531
Query: 304 -LTGGRR 309
L+ G++
Sbjct: 532 ALSYGQK 538
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 110
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 27/207 (13%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRS---EVAAIASAQHVNLVRLLGYC 165
+G G+ V+K + G + A+K+I E+ E + E++ + +H N+V+L Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 166 VVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLH 224
V+ R LV+E + ++ GG S + + + ++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQ---------DLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCH 117
Query: 225 NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTIRGTRGYLAPE 281
+ RVLH D+KP+N+L++ ++DFGL++ R + I T+ Y AP+
Sbjct: 118 D---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL----WYRAPD 170
Query: 282 WIL-EQGVSEKCDIYSYGMVLLELTGG 307
++ + S DI+S G + E+ G
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGXVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 105 FQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGY 164
Q +G G V++G G VAVK + E +E+ +H N++ +
Sbjct: 10 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 165 CVVPGGPR---YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
G +LV ++ ++GSL ++ + EG ++A+ A L+
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-----------MIKLALSTASGLA 117
Query: 222 YLHNDC-----RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR---- 272
+LH + + + H D+K +NIL+ +N ++D GL+ + D + I
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 175
Query: 273 -GTRGYLAPEWILEQGVSEK-------CDIYSYGMVLLELT 305
GT+ Y+APE +L+ ++ K DIY+ G+V E+
Sbjct: 176 VGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 110
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 109 LGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEVAAIASAQHVNLVRLL 162
+G G V +GI + +VA+K ++ ++F E + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
G V+ P +++ E G L F R+ YS S L A ++ AL+Y
Sbjct: 80 G--VITENPVWIIMELCTLGELRS--FLQVRK----YSLDLASLIL---YAYQLSTALAY 128
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
L + R +H D+ N+L+ N + DFGLS+ M T + ++G L +W
Sbjct: 129 LES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKW 180
Query: 283 ILEQGV-----SEKCDIYSYGMVLLEL 304
+ + + + D++ +G+ + E+
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEI 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKG---ILSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHV 156
+NFQ + +G G+ V+K + + ++ R++ E G E++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 112
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 113 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 168
Query: 277 YLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKG---ILSDGTSVAVKRINGEENGEKEFR-SEVAAIASAQHV 156
+NFQ + +G G+ V+K + + ++ R++ E G E++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 111
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 112 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 167
Query: 277 YLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 105 FQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGY 164
Q +G G V++G G VAVK + E +E+ +H N++ +
Sbjct: 13 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 165 CVVPGGPR---YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
G +LV ++ ++GSL ++ + EG ++A+ A L+
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-----------MIKLALSTASGLA 120
Query: 222 YLHNDC-----RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR---- 272
+LH + + + H D+K +NIL+ +N ++D GL+ + D + I
Sbjct: 121 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 178
Query: 273 -GTRGYLAPEWILEQGVSEK-------CDIYSYGMVLLELT 305
GT+ Y+APE +L+ ++ K DIY+ G+V E+
Sbjct: 179 VGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 111
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 169 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 193
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 191
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 133 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 185
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 157 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 209
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 188
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+E + D F + G + L +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEHVHQ---DLKTFMDASALTG------IPLPLIKSYLFQL 111
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRG 276
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R T T
Sbjct: 112 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLW 167
Query: 277 YLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 145 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 197
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 110
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 168 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 111
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTIRG 273
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 112 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL-- 166
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 167 --WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 188
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 109 LGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEVAAIASAQHVNLVRLL 162
+G G V +GI + +VA+K ++ ++F E + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV--AIDVAKAL 220
G V+ P +++ E G L ++ R+ S DL + A ++ AL
Sbjct: 458 G--VITENPVWIIMELCTLGELRSFL--QVRK---------FSLDLASLILYAYQLSTAL 504
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL + R +H D+ N+L+ N + DFGLS+ M T + ++G L
Sbjct: 505 AYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPI 556
Query: 281 EWILEQGV-----SEKCDIYSYGMVLLEL 304
+W+ + + + D++ +G+ + E+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEI 585
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 188
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 131 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 183
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 146 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 198
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 144 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 196
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 197 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 182
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 192
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 146 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 198
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 112
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 113 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 170 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 146 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 198
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 154 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 206
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 154 QHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
+H N+VRL + G YL+++ + G L I SE S C+
Sbjct: 79 KHPNIVRLHD-SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH-CIQ-------- 128
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITT 270
+ +A+ + H + V+H D+KPEN+LL + ++DFGL+ + +Q +
Sbjct: 129 -QILEAVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFG 183
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + + + D+++ G++L L G
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 191
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 153 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 205
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 113
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 171 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 112
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 113 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 170 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 192
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 192
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 182
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 105 FQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGY 164
Q +G G V++G G VAVK + E +E+ +H N++ +
Sbjct: 8 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 165 CVVPGGPR---YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
G +LV ++ ++GSL ++ + EG ++A+ A L+
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-----------MIKLALSTASGLA 115
Query: 222 YLHNDC-----RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR---- 272
+LH + + + H D+K +NIL+ +N ++D GL+ + D + I
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 173
Query: 273 -GTRGYLAPEWILEQGVSEK-------CDIYSYGMVLLELT 305
GT+ Y+APE +L+ ++ K DIY+ G+V E+
Sbjct: 174 VGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 131 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 183
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 65 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 114
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 115 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 171
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 172 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 132 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 184
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 153 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 205
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 30/222 (13%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEV 147
R E++ +G G V +GI + +VA+K ++ ++F E
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 148 AAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
+ H ++V+L+G V+ P +++ E G L F R+ YS S
Sbjct: 68 LTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRS--FLQVRK----YSLDLASLI 119
Query: 208 LRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRC 267
L A ++ AL+YL + R +H D+ N+L+ N + DFGLS+ M
Sbjct: 120 L---YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---- 169
Query: 268 ITTIRGTRGYLAPEWILEQGV-----SEKCDIYSYGMVLLEL 304
T + ++G L +W+ + + + D++ +G+ + E+
Sbjct: 170 -TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 210
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 154 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 206
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 125 GTSVAVKRINGEENGEKE-FRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGS 183
G + A K + +KE R E+ ++ +H LV L ++YEF+ G
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD-AFEDDNEMVMIYEFMSGGE 240
Query: 184 LDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL 243
L + ++ H +S D V K L ++H + +HLD+KPENI+
Sbjct: 241 L------FEKVADEH---NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMF 288
Query: 244 DENYRAVVS--DFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVL 301
+ DFGL+ + QS +TT GT + APE + V D++S G++
Sbjct: 289 TTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346
Query: 302 LELTGG 307
L G
Sbjct: 347 YILLSG 352
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 111
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTIRG 273
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 112 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL-- 166
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 167 --WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 105 FQALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGY 164
Q +G G V++G G VAVK + E +E+ +H N++ +
Sbjct: 33 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 165 CVVPGGPR---YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
G +LV ++ ++GSL ++ + EG ++A+ A L+
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-----------MIKLALSTASGLA 140
Query: 222 YLHNDC-----RSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR---- 272
+LH + + + H D+K +NIL+ +N ++D GL+ + D + I
Sbjct: 141 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 198
Query: 273 -GTRGYLAPEWILEQGVSEK-------CDIYSYGMVLLEL 304
GT+ Y+APE +L+ ++ K DIY+ G+V E+
Sbjct: 199 VGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+EF+ D F + G + L
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLF 113
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 171 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 182
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 103 DNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQHV 156
+NFQ + +G G+ V+K G VA+K+I + E + E++ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 157 NLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDV 216
N+V+LL + YLV+EF+ D F + G + L +
Sbjct: 64 NIVKLLD-VIHTENKLYLVFEFLHQ---DLKKFMDASALTG------IPLPLIKSYLFQL 113
Query: 217 AKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTIRG 273
+ L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 114 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL-- 168
Query: 274 TRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 169 --WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 109 LGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEVAAIASAQHVNLVRLL 162
+G G V +GI + +VA+K ++ ++F E + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
G V+ P +++ E G L F R+ YS S L A ++ AL+Y
Sbjct: 81 G--VITENPVWIIMELCTLGELRS--FLQVRK----YSLDLASLIL---YAYQLSTALAY 129
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
L + R +H D+ N+L+ N + DFGLS+ M T + ++G L +W
Sbjct: 130 LES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKW 181
Query: 283 ILEQGV-----SEKCDIYSYGMVLLEL 304
+ + + + D++ +G+ + E+
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEI 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 109 LGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEVAAIASAQHVNLVRLL 162
+G G V +GI + +VA+K ++ ++F E + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
G V+ P +++ E G L F R+ YS S L A ++ AL+Y
Sbjct: 106 G--VITENPVWIIMELCTLGELRS--FLQVRK----YSLDLASLIL---YAYQLSTALAY 154
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
L + R +H D+ N+L+ N + DFGLS+ M T + ++G L +W
Sbjct: 155 LES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKW 206
Query: 283 ILEQGV-----SEKCDIYSYGMVLLEL 304
+ + + + D++ +G+ + E+
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEI 233
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 29/208 (13%)
Query: 109 LGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLL 162
+G G+ A V + IL+ G VAV+ I+ + + +K FR EV + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
+ YLV E+ G + ++ R E ++R + A+ Y
Sbjct: 80 E-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-------KFR---QIVSAVQY 128
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H + ++H D+K EN+LLD + ++DFG S + + G+ Y APE
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPE- 182
Query: 283 ILEQGVS---EKCDIYSYGMVLLELTGG 307
L QG + D++S G++L L G
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 233 HLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKC 292
H DVKPENIL+ + A + DFG++ + ++ + GT Y APE E + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 293 DIYSYGMVLLE-LTG 306
DIY+ VL E LTG
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 132 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 186
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 187 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 131 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 185
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 186 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 125 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 179
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 180 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLD---ENYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 130 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 184
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 185 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 140 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 194
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 195 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 126 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 180
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 181 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 124 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 178
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 179 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 27/207 (13%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRS---EVAAIASAQHVNLVRLLGYC 165
+G G+ V+K + G + A+K+I E+ E + E++ + +H N+V+L Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 166 VVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLH 224
V+ R LV+E + ++ GG S + + + ++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQ---------DLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCH 117
Query: 225 NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTIRGTRGYLAPE 281
+ RVLH D+KP+N+L++ ++DFGL++ R + + T+ Y AP+
Sbjct: 118 D---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL----WYRAPD 170
Query: 282 WIL-EQGVSEKCDIYSYGMVLLELTGG 307
++ + S DI+S G + E+ G
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S + TR Y
Sbjct: 140 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYR 194
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELTGG 307
APE IL G E DI+S G ++ E+ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 108 LLGHGSSASVFKGILSDGTS----VAVKRIN--GEENGEKEFRSEVAAIASAQHVNLVRL 161
++G G V+ G D A+K ++ E + F E + H N++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 162 LGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALS 221
+G + P G +++ ++ +G L +I R +S+ L+ VA+ +
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPT---VKDLISFGLQ------VARGME 138
Query: 222 YLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR---GYL 278
YL + +H D+ N +LDE++ V+DFGL++ + + + R R +
Sbjct: 139 YL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT 195
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
A E + + K D++S+G++L EL
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWEL 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 109 LGHGSSASV--FKGILSDGTSVAVKRINGEE----NGEKEFRSEVAAIASAQHVNLVRLL 162
+G G+ A V + IL+ G VAVK I+ + + +K FR EV H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLF 79
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY 222
+ YLV E+ G + ++ R E ++R + A+ Y
Sbjct: 80 E-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA-------KFR---QIVSAVQY 128
Query: 223 LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEW 282
H + ++H D+K EN+LLD + ++DFG S + + G Y APE
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE- 182
Query: 283 ILEQGVS---EKCDIYSYGMVLLELTGG 307
L QG + D++S G++L L G
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 27/207 (13%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRS---EVAAIASAQHVNLVRLLGYC 165
+G G+ V+K + G + A+K+I E+ E + E++ + +H N+V+L Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 166 VVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLH 224
V+ R LV+E + ++ GG S + + + ++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQ---------DLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCH 117
Query: 225 NDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTIRGTRGYLAPE 281
+ RVLH D+KP+N+L++ ++DFGL++ R + + T+ Y AP+
Sbjct: 118 D---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL----WYRAPD 170
Query: 282 WIL-EQGVSEKCDIYSYGMVLLELTGG 307
++ + S DI+S G + E+ G
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 126 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 180
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 181 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL++ + + + TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 170 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 224
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 225 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 176 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 230
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 231 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL++ + + + TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGL----CRHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL++ + + + TR
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATR 182
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 131 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 185
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 103 DNFQAL--LGHGSSASVFKGILSDGTSVAVKRI--NGEENG-EKEFRSEVAAIASAQHVN 157
+ +Q L +G G+ V+K S G VA+KRI + E+ G E++ + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 158 LVRLLGY-----CVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV 212
+V L+ C+ LV+EF++ + + + +G S ++
Sbjct: 81 IVSLIDVIHSERCLT------LVFEFMEKD--------LKKVLDENKTGLQDS-----QI 121
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR 272
I + + L + + + R+LH D+KP+N+L++ + ++DFGL++ R T
Sbjct: 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEV 180
Query: 273 GTRGYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
T Y AP+ ++ + S DI+S G + E+ G+
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR
Sbjct: 163 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL----ARHTDDEMTGYVATR 215
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGN 318
Y APE +L + DI+S G ++ EL GR +H N
Sbjct: 216 WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN 259
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 103 DNFQAL--LGHGSSASVFKGILSDGTSVAVKRI--NGEENG-EKEFRSEVAAIASAQHVN 157
+ +Q L +G G+ V+K S G VA+KRI + E+ G E++ + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 158 LVRLLGY-----CVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV 212
+V L+ C+ LV+EF++ + + + +G S ++
Sbjct: 81 IVSLIDVIHSERCLT------LVFEFMEKD--------LKKVLDENKTGLQDS-----QI 121
Query: 213 AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR 272
I + + L + + + R+LH D+KP+N+L++ + ++DFGL++ R T
Sbjct: 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEV 180
Query: 273 GTRGYLAPEWIL-EQGVSEKCDIYSYGMVLLELTGGR 308
T Y AP+ ++ + S DI+S G + E+ G+
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+ L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR Y
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGL----ARQADEEMTGYVATRWY 194
Query: 278 LAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
APE +L ++ DI+S G ++ EL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 129/319 (40%), Gaps = 71/319 (22%)
Query: 109 LGHGSSASVFKGILSDGTSVAVKRINGEENGEK---EFRSEVAAIAS-AQHVN-LVRLLG 163
+G G S+ VF+ + A+K +N EE + +R+E+A + QH + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 164 YCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
Y + +Y ++ G++D SW L+ + +ID + SY
Sbjct: 124 YEIT----DQYIYMVMECGNID-----------------LNSW-LKKKKSIDPWERKSYW 161
Query: 223 ------LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIR-GTR 275
+H + ++H D+KP N L+ + ++ DFG++ M D + + + G
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAV 220
Query: 276 GYLAPEWILEQGVSEK-----------CDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNK 324
Y+ PE I + S + D++S G +L +T G+
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------------- 266
Query: 325 WQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQVRRLVDVAFWCIQERARLRPSMARV 384
F +I+N+ KL I+D E + + L DV C++ + R S+ +
Sbjct: 267 ---FQQIINQI---SKLHAIIDP--NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 318
Query: 385 VEMLEGRVAVDDPPDTQMV 403
+ V + P QM
Sbjct: 319 --LAHPYVQIQTHPVNQMA 335
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+ L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR Y
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGL----ARQADEEMTGYVATRWY 194
Query: 278 LAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
APE +L ++ DI+S G ++ EL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 139 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 193
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 176 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 230
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 176 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 230
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 220 LSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLA 279
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y A
Sbjct: 140 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRA 194
Query: 280 PEWILEQGVSEKCDIYSYGMVLLEL 304
PE IL G E DI+S G ++ E+
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 220 LSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLA 279
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRA 193
Query: 280 PEWILEQGVSEKCDIYSYGMVLLEL 304
PE IL G E DI+S G ++ E+
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 137 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 191
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEM 217
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 220 LSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLA 279
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y A
Sbjct: 133 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRA 187
Query: 280 PEWILEQGVSEKCDIYSYGMVLLEL 304
PE IL G E DI+S G ++ E+
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 131 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 185
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 132 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 186
Query: 279 APEWILEQGVSEKCDIYSYGMVLLEL 304
APE IL G E DI+S G ++ E+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL++ + + TR
Sbjct: 154 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV----ATR 206
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + D+GL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+ L Y+H+ + ++H D+KP N+ ++E+ + DFGL +R +T TR Y
Sbjct: 134 RGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGL----ARQADEEMTGYVATRWY 186
Query: 278 LAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
APE +L ++ DI+S G ++ EL G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 195 SEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDF 254
S+G Y DL + VA+ + +L + + +H D+ NILL EN + DF
Sbjct: 188 SDGFYKEPITMEDL-ISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDF 243
Query: 255 GLSKLMSRDQSRCIT-TIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLEL 304
GL++ + ++ R ++APE I ++ S K D++SYG++L E+
Sbjct: 244 GLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEI 294
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 109 LGHGS-----SASVFKGILSDGT--SVAVKRIN-GEENGE-KEFRSEVAAIAS-AQHVNL 158
LG G+ AS F GI T +VAVK + G E K +E+ + H+N+
Sbjct: 35 LGRGAFGKVVQASAF-GIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNV 93
Query: 159 VRLLGYCVVPGGPRYLVYEFIQNGSLDHWI 188
V LLG C GGP ++ E+ + G+L +++
Sbjct: 94 VNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 44/244 (18%)
Query: 105 FQALLGHGSSASVFKGILSD--------GTSVAVKRIN-GEENGEKEFRSEVAAIASAQH 155
F LG G+ +FKG+ + T V +K ++ N + F + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
+LV G CV G LV EF++ GSLD ++ + C++ + VA
Sbjct: 72 KHLVLNYGVCVC-GDENILVQEFVKFGSLDTYL---------KKNKNCINILWKLEVAKQ 121
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILL--DENYRA------VVSDFGLS-KLMSRDQSR 266
+A A+ +L + ++H +V +NILL +E+ + +SD G+S ++ +D
Sbjct: 122 LAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD--- 175
Query: 267 CITTIRGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLEL-TGGRRNVSLIEHGNDKSKNK 324
++ ++ PE I + ++ D +S+G L E+ +GG + +S ++ S+ K
Sbjct: 176 ---ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-----SQRK 227
Query: 325 WQYF 328
Q++
Sbjct: 228 LQFY 231
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 34/224 (15%)
Query: 94 RSKELEEATDNFQALLGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEV 147
R E++ +G G V +GI + +VA+K ++ ++F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 148 AAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWD 207
+ H ++V+L+G V+ P +++ E G L F R+ S D
Sbjct: 63 LTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRS--FLQVRK---------FSLD 109
Query: 208 LRYRV--AIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQS 265
L + A ++ AL+YL + R +H D+ N+L+ + DFGLS+ M
Sbjct: 110 LASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-- 164
Query: 266 RCITTIRGTRGYLAPEWILEQGV-----SEKCDIYSYGMVLLEL 304
T + ++G L +W+ + + + D++ +G+ + E+
Sbjct: 165 ---TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 173 YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI-DVAKALSYLHNDCRSRV 231
YLV+E ++ GS+ I RR H++ +L V + DVA AL +LHN +
Sbjct: 87 YLVFEKMRGGSILSHIH--KRR---HFN------ELEASVVVQDVASALDFLHN---KGI 132
Query: 232 LHLDVKPENILLDENYRAV---VSDFGLSK--LMSRDQSRCIT----TIRGTRGYLAPEW 282
H D+KPENIL + + + DF L ++ D S T T G+ Y+APE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 283 ILEQGVSE-------KCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVN-- 333
+ + SE +CD++S G++L L G + G+D ++ + P N
Sbjct: 193 V--EAFSEEASIYDKRCDLWSLGVILYILLSGYPPF-VGRCGSDCGWDRGEACPACQNML 249
Query: 334 -EKMKEGK 340
E ++EGK
Sbjct: 250 FESIQEGK 257
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DFGL++ + + TR
Sbjct: 157 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV----ATR 209
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 128 VAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHW 187
VAVK I E ++ + E+ S +H N+VR + P +V E+ G L
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFER 105
Query: 188 IFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD--E 245
I R SE + R+ + +SY H +V H D+K EN LLD
Sbjct: 106 ICNAGRFSED---------EARFFFQ-QLISGVSYAH---AMQVAHRDLKLENTLLDGSP 152
Query: 246 NYRAVVSDFGLSK---LMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK-CDIYSYGMVL 301
R ++DFG SK L S+ +S GT Y+APE +L++ K D++S G+ L
Sbjct: 153 APRLKIADFGYSKASVLHSQPKSAV-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
Query: 302 LELTGG 307
+ G
Sbjct: 208 YVMLVG 213
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 212 VAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTI 271
+AID L Y+H D +KP+NIL+D N ++DFG + D + +
Sbjct: 186 IAIDSVHQLHYVHRD---------IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 272 RGTRGYLAPEWI--LEQG---VSEKCDIYSYGMVLLELTGGRRNV---SLIEHGNDKSKN 323
GT Y++PE + +E G +CD +S G+ + E+ G SL+E +
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 324 KWQY-FPKIVNEKMKEGK 340
K ++ FP V + + K
Sbjct: 297 KERFQFPTQVTDVSENAK 314
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 154 QHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVA 213
+H N+VRL + G YL+++ + G L I SE S C+
Sbjct: 68 KHPNIVRLHD-SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH-CIQ-------- 117
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAV---VSDFGLSKLMSRDQSRCITT 270
+ +A+ + H + V+H ++KPEN+LL + ++DFGL+ + +Q
Sbjct: 118 -QILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG- 172
Query: 271 IRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT GYL+PE + + + D+++ G++L L G
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 141 KEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYS 200
++F +EV + Q N V P G Y+V E++ SL +RS+G
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVG--YIVMEYVGGQSL--------KRSKGQK- 178
Query: 201 GGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM 260
L +++ ALSYLH+ +++ D+KPENI+L E ++ +S++
Sbjct: 179 ---LPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLIDLGAVSRIN 232
Query: 261 SRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELT 305
S + GT G+ APE I+ G + DIY+ G L LT
Sbjct: 233 S------FGYLYGTPGFQAPE-IVRTGPTVATDIYTVGRTLAALT 270
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 109 LGHGSSASVFKGILSDGTS-VAVKRINGEENGEKEFRS---EVAAIASAQHVNLVRLLGY 164
+G G+ +VFK + VA+KR+ +++ E S E+ + +H N+VRL +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL--H 67
Query: 165 CVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYL 223
V+ + LV+EF ++ G L ++ + K L +
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYF----------DSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 224 HNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWI 283
H+ VLH D+KP+N+L++ N +++FGL++ RC + T Y P+ +
Sbjct: 118 HS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVVTLWYRPPDVL 173
Query: 284 LEQGV-SEKCDIYSYGMVLLELTGGRRNVSLIEHGND 319
+ S D++S G + EL R + GND
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLF---PGND 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 128 VAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHW 187
VAVK I E ++ + E+ S +H N+VR + P +V E+ G L
Sbjct: 46 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFER 104
Query: 188 IFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD--E 245
I R SE + R+ + +SY H +V H D+K EN LLD
Sbjct: 105 ICNAGRFSED---------EARFFFQ-QLISGVSYCH---AMQVCHRDLKLENTLLDGSP 151
Query: 246 NYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK-CDIYSYGMVLLEL 304
R + DFG SK S S+ +T+ GT Y+APE +L++ K D++S G+ L +
Sbjct: 152 APRLKICDFGYSK-SSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 209
Query: 305 TGG 307
G
Sbjct: 210 LVG 212
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 49/245 (20%)
Query: 85 KVAGVPIKFRSKELEEATDNF---QALLGHGSSASV-FKGILSDGTSVAVKR--INGEEN 138
++A +P E++ N + +LG+GSS +V F+G G VAVKR I+ +
Sbjct: 20 RIANIP------NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDI 72
Query: 139 GEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGH 198
E + S H N++R YC R+L Y ++ +L+ S+ +
Sbjct: 73 ALMEIK---LLTESDDHPNVIRY--YCSETTD-RFL-YIALELCNLNLQDLVESK----N 121
Query: 199 YSGGCLSWDLRYR---VAIDVAKALSYLHNDCRSRVLHLDVKPENILLD----------- 244
S L Y + +A +++LH+ +++H D+KP+NIL+
Sbjct: 122 VSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQT 178
Query: 245 --ENYRAVVSDFGLSKLMSRDQSRC---ITTIRGTRGYLAPEWILEQG---VSEKCDIYS 296
EN R ++SDFGL K + Q + GT G+ APE + E ++ DI+S
Sbjct: 179 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFS 238
Query: 297 YGMVL 301
G V
Sbjct: 239 MGCVF 243
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 49/245 (20%)
Query: 85 KVAGVPIKFRSKELEEATDNF---QALLGHGSSASV-FKGILSDGTSVAVKR--INGEEN 138
++A +P E++ N + +LG+GSS +V F+G G VAVKR I+ +
Sbjct: 20 RIANIP------NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDI 72
Query: 139 GEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGH 198
E + S H N++R YC R+L Y ++ +L+ S+ +
Sbjct: 73 ALMEIK---LLTESDDHPNVIRY--YCSETTD-RFL-YIALELCNLNLQDLVESK----N 121
Query: 199 YSGGCLSWDLRYR---VAIDVAKALSYLHNDCRSRVLHLDVKPENILLD----------- 244
S L Y + +A +++LH+ +++H D+KP+NIL+
Sbjct: 122 VSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQT 178
Query: 245 --ENYRAVVSDFGLSKLMSRDQSRC---ITTIRGTRGYLAPEWILEQG---VSEKCDIYS 296
EN R ++SDFGL K + Q + GT G+ APE + E ++ DI+S
Sbjct: 179 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFS 238
Query: 297 YGMVL 301
G V
Sbjct: 239 MGCVF 243
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
+ L YLH + +LH D+KP N+LLDEN ++DFGL+K +R TR Y
Sbjct: 123 QGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQVVTRWY 178
Query: 278 LAPEWILEQ---GVSEKCDIYSYGMVLLEL 304
APE + GV D+++ G +L EL
Sbjct: 179 RAPELLFGARMYGVG--VDMWAVGCILAEL 206
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 107 ALLGHGSSASVFKG-ILSDGTSVAVKRI---NGEENGEKEFRSEVAAIASAQHVNLVRLL 162
A +G G+ VFK G VA+K++ N +E E+ + +H N+V L+
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 82
Query: 163 GYCVVPGGPR-------YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVA 213
C P YLV++F ++ G S + + L RV
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEHDL------------AGLLSNVLVKFTLSEIKRVM 130
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK---LMSRDQSRCITT 270
+ L Y+H R+++LH D+K N+L+ + ++DFGL++ L Q
Sbjct: 131 QMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 271 IRGTRGYLAPEWIL-EQGVSEKCDIYSYGMVLLEL 304
T Y PE +L E+ D++ G ++ E+
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 106 QALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
Q + GS +V G+ S+G VA+KR+ + + + + + +RLL +
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 166 VVPG--GPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
P G R + F + ++ R++ + D R ++ + Y
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDL----AQVIHDQRIVISPQHIQYFMYH 142
Query: 223 ----LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
LH + V+H D+ P NILL +N + DF L++ + D ++ T R Y
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK--THYVTHRWYR 200
Query: 279 APEWILE-QGVSEKCDIYSYGMVLLEL 304
APE +++ +G ++ D++S G V+ E+
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 211 RVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYR---AVVSDFGLSKLMSRDQSRC 267
R+ + + + YLH ++ ++HLD+KP+NILL Y + DFG+S+ + C
Sbjct: 135 RLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH---AC 188
Query: 268 -ITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMV 300
+ I GT YLAPE + ++ D+++ G++
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 143 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 197
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELT 305
APE IL G E D++S G ++ E+
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 106 QALLGHGSSASVFKGILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYC 165
Q + GS +V G+ S+G VA+KR+ + + + + + +RLL +
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 166 VVPG--GPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSY- 222
P G R + F + ++ R++ + D R ++ + Y
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDL----AQVIHDQRIVISPQHIQYFMYH 142
Query: 223 ----LHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
LH + V+H D+ P NILL +N + DF L++ + D ++ T R Y
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK--THYVTHRWYR 200
Query: 279 APEWILE-QGVSEKCDIYSYGMVLLEL 304
APE +++ +G ++ D++S G V+ E+
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 107 ALLGHGSSASVFKG-ILSDGTSVAVKRI---NGEENGEKEFRSEVAAIASAQHVNLVRLL 162
A +G G+ VFK G VA+K++ N +E E+ + +H N+V L+
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 163 GYCVVPGGPR-------YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVA 213
C P YLV++F ++ G S + + L RV
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDL------------AGLLSNVLVKFTLSEIKRVM 131
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK---LMSRDQSRCITT 270
+ L Y+H R+++LH D+K N+L+ + ++DFGL++ L Q
Sbjct: 132 QMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 271 IRGTRGYLAPEWIL-EQGVSEKCDIYSYGMVLLEL 304
T Y PE +L E+ D++ G ++ E+
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 107 ALLGHGSSASVFKG-ILSDGTSVAVKRI---NGEENGEKEFRSEVAAIASAQHVNLVRLL 162
A +G G+ VFK G VA+K++ N +E E+ + +H N+V L+
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 163 GYCVVPGGPR-------YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVA 213
C P YLV++F ++ G S + + L RV
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEHDL------------AGLLSNVLVKFTLSEIKRVM 131
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK---LMSRDQSRCITT 270
+ L Y+H R+++LH D+K N+L+ + ++DFGL++ L Q
Sbjct: 132 QMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 271 IRGTRGYLAPEWIL-EQGVSEKCDIYSYGMVLLEL 304
T Y PE +L E+ D++ G ++ E+
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S +T TR Y
Sbjct: 132 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 186
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELT 305
APE IL G E D++S G ++ E+
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 107 ALLGHGSSASVFKG-ILSDGTSVAVKRI---NGEENGEKEFRSEVAAIASAQHVNLVRLL 162
A +G G+ VFK G VA+K++ N +E E+ + +H N+V L+
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 163 GYCVVPGGPR-------YLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLR--YRVA 213
C P YLV++F ++ G S + + L RV
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDL------------AGLLSNVLVKFTLSEIKRVM 131
Query: 214 IDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSK---LMSRDQSRCITT 270
+ L Y+H R+++LH D+K N+L+ + ++DFGL++ L Q
Sbjct: 132 QMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 271 IRGTRGYLAPEWIL-EQGVSEKCDIYSYGMVLLEL 304
T Y PE +L E+ D++ G ++ E+
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQS--RCITTIRG 273
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ + T +
Sbjct: 478 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 274 TRGYLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ G
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 276 G--YLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 87 AGVPIKFRSKELEEATDNFQALLGHGSSASVF-KGILSDGTS--VAVKRINGEENGEKE- 142
A P F + L++ D + GH S++ +DGT VAVK + + +
Sbjct: 5 ASDPTVFHKRYLKKIRDLGE---GHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS 61
Query: 143 -FRSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYS 200
++ E+ + + H ++++ G C G LV E++ GSL ++ R S G
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIG--- 115
Query: 201 GGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM 260
L+ L + A + + ++YLH+ +H ++ N+LLD + + DFGL+K +
Sbjct: 116 ---LAQLLLF--AQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 261 SRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
G + APE + E D++S+G+ L EL
Sbjct: 168 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQS--RCITTIRG 273
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ + T +
Sbjct: 479 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 274 TRGYLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ G
Sbjct: 116 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 276 G--YLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 109 LGHGSSASVFKGIL----SDGTSVAVKRING--EENGEKEFRSEVAAIASAQHVNLVRLL 162
+G G V +GI + +VA+K ++ ++F E + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 163 GYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRV--AIDVAKAL 220
G V+ P +++ E G L ++ R+ S DL + A ++ AL
Sbjct: 458 G--VITENPVWIIMELCTLGELRSFL--QVRK---------FSLDLASLILYAYQLSTAL 504
Query: 221 SYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAP 280
+YL + R +H D+ N+L+ + DFGLS+ M T + ++G L
Sbjct: 505 AYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-----TYYKASKGKLPI 556
Query: 281 EWILEQGV-----SEKCDIYSYGMVLLEL 304
+W+ + + + D++ +G+ + E+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEI 585
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ G
Sbjct: 114 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 276 G--YLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ G
Sbjct: 126 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 276 G--YLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ G
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 276 G--YLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ G
Sbjct: 134 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 276 G--YLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ G
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 276 G--YLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
V+ + YL S +H D+ N+LL + A +SDFGLSK + D++ G
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 276 G--YLAPEWILEQGVSEKCDIYSYGMVLLE 303
+ APE I S K D++S+G+++ E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +T
Sbjct: 124 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTEPC 178
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD++S G+++ L G
Sbjct: 179 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDE---NYRAVVSDFGLSKLMSRDQSRCITTIR 272
+ +A+ YLH+ + H DVKPEN+L N ++DFG +K + S +TT
Sbjct: 170 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC 224
Query: 273 GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
T Y+APE + + + CD +S G++ L G
Sbjct: 225 YTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + FGL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 101 ATDNFQAL--LGHGSSASVFKGILS-DGTSVAVKRINGEENGEKEFRS---EVAAIASAQ 154
+ +NFQ + +G G+ V+K G VA+K+I + E + E++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 155 HVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAI 214
H N+V+LL + YLV+E + D F + G + L
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEHVDQ---DLKKFMDASALTG------IPLPLIKSYLF 113
Query: 215 DVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMS---RDQSRCITTI 271
+ + L++ H+ RVLH D+KP+N+L++ ++DFGL++ R + T+
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 272 RGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L + S DI+S G + E+ R
Sbjct: 171 ----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 53/249 (21%)
Query: 85 KVAGVPIKFRSKELEEATDNF---QALLGHGSSASV-FKGILSDGTSVAVKR--INGEEN 138
++A +P E++ N + +LG+GSS +V F+G G VAVKR I+ +
Sbjct: 2 RIANIP------NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDI 54
Query: 139 GEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGH 198
E + S H N++R YC + + N +L + +
Sbjct: 55 ALMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLV------ESKN 103
Query: 199 YSGGCLSWDLRYR---VAIDVAKALSYLHNDCRSRVLHLDVKPENILLD----------- 244
S L Y + +A +++LH+ +++H D+KP+NIL+
Sbjct: 104 VSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQT 160
Query: 245 --ENYRAVVSDFGLSKLMSRDQSRC---ITTIRGTRGYLAPEWILEQG-------VSEKC 292
EN R ++SDFGL K + Q + GT G+ APE + E ++
Sbjct: 161 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI 220
Query: 293 DIYSYGMVL 301
DI+S G V
Sbjct: 221 DIFSMGCVF 229
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 81/183 (44%), Gaps = 19/183 (10%)
Query: 128 VAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHW 187
VAVK I E + E+ S +H N+VR + P +V E+ G L
Sbjct: 47 VAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFER 105
Query: 188 IFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD--E 245
I R SE + R+ + +SY H +V H D+K EN LLD
Sbjct: 106 ICNAGRFSED---------EARFFFQ-QLISGVSYCH---AMQVCHRDLKLENTLLDGSP 152
Query: 246 NYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK-CDIYSYGMVLLEL 304
R + DFG SK S S+ +T+ GT Y+APE +L++ K D++S G+ L +
Sbjct: 153 APRLKICDFGYSK-SSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 305 TGG 307
G
Sbjct: 211 LVG 213
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + DF L +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 87 AGVPIKFRSKELEEATDNFQALLGHGSSASVF-KGILSDGTS--VAVKRINGEENGEKE- 142
A P F + L++ D + GH S++ +DGT VAVK + + +
Sbjct: 5 ASDPTVFHKRYLKKIRDLGE---GHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS 61
Query: 143 -FRSEVAAIASAQHVNLVRLLGYCVVPGGPRY-LVYEFIQNGSLDHWIFPTSRRSEGHYS 200
++ E+ + + H ++++ G C G LV E++ GSL ++ R S G
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIG--- 115
Query: 201 GGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLM 260
L+ L + A + + ++YLH +H ++ N+LLD + + DFGL+K +
Sbjct: 116 ---LAQLLLF--AQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 261 SRDQSRCITTIRGTRG--YLAPEWILEQGVSEKCDIYSYGMVLLEL 304
G + APE + E D++S+G+ L EL
Sbjct: 168 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 108 LLGHGSSAS-VFKGILSDGTSVAVKRINGEENGEKEFRSEVAAI-ASAQHVNLVRLLGYC 165
+LGHG+ + V++G+ D VAVKRI E + EV + S +H N++R +C
Sbjct: 31 VLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFAD--REVQLLRESDEHPNVIRY--FC 85
Query: 166 VVPGGP-RYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLH 224
+Y+ E +L ++ ++ H ++ + L++LH
Sbjct: 86 TEKDRQFQYIAIELCA-ATLQEYV---EQKDFAHLGLEPIT------LLQQTTSGLAHLH 135
Query: 225 NDCRSRVLHLDVKPENILLDE-----NYRAVVSDFGLSKLMS--RDQSRCITTIRGTRGY 277
+ ++H D+KP NIL+ +A++SDFGL K ++ R + + GT G+
Sbjct: 136 S---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 278 LAPEWILE---QGVSEKCDIYSYGMVL 301
+APE + E + + DI+S G V
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVF 219
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 19/183 (10%)
Query: 128 VAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHW 187
VAVK I ++ + E+ S +H N+VR + P ++ E+ G L
Sbjct: 48 VAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTH-LAIIMEYASGGELYER 106
Query: 188 IFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILLD--E 245
I R SE + R+ + +SY H+ ++ H D+K EN LLD
Sbjct: 107 ICNAGRFSED---------EARFFFQ-QLLSGVSYCHS---MQICHRDLKLENTLLDGSP 153
Query: 246 NYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEK-CDIYSYGMVLLEL 304
R + DFG SK S S+ +T+ GT Y+APE +L Q K D++S G+ L +
Sbjct: 154 APRLKICDFGYSK-SSVLHSQPKSTV-GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVM 211
Query: 305 TGG 307
G
Sbjct: 212 LVG 214
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 140 EKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHY 199
++E ++E++ + H NL++L LV E++ G L I S Y
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYD-AFESKNDIVLVMEYVDGGELFDRIIDES------Y 182
Query: 200 SGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENIL-LDENYRAV-VSDFGLS 257
+ L L + + + + ++H + +LHLD+KPENIL ++ + + + + DFGL+
Sbjct: 183 NLTELDTILFMK---QICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLA 236
Query: 258 KLMSRDQSRCITTIR-GTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ R + R + GT +LAPE + VS D++S G++ L G
Sbjct: 237 R---RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + D GL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 28/123 (22%)
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCI-------------------- 268
S ++H D+KP N LL+++ V DFGL++ ++ ++ I
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 269 -TTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKNKWQ 326
T+ TR Y APE I L++ ++ DI+S G + EL L H ND + N++
Sbjct: 208 LTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN-----MLQSHINDPT-NRFP 261
Query: 327 YFP 329
FP
Sbjct: 262 LFP 264
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 218 KALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGY 277
K L Y+H + ++H D+KP N+ ++E+ + DFGL++ + + TR Y
Sbjct: 139 KGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWY 191
Query: 278 LAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
APE IL ++ DI+S G ++ E+ G+
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + D GL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTR 275
+ + L Y+H+ + ++H D+KP N+ ++E+ + D GL +R +T TR
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGL----ARHTDDEMTGYVATR 186
Query: 276 GYLAPEWILE-QGVSEKCDIYSYGMVLLELTGGR 308
Y APE +L ++ DI+S G ++ EL GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENI-LLDENY---RAVVSDFGLSKLMSRDQSRCITTI 271
+ + YLH+ ++ H D+KPENI LLD N R + DFGL+ + D I
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNI 177
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT ++APE + + + + D++S G++ L G
Sbjct: 178 FGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 112/244 (45%), Gaps = 44/244 (18%)
Query: 105 FQALLGHGSSASVFKGILSD--------GTSVAVKRIN-GEENGEKEFRSEVAAIASAQH 155
F LG G+ +FKG+ + T V +K ++ N + F + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 156 VNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAID 215
+LV G C G LV EF++ GSLD ++ + C++ + VA
Sbjct: 72 KHLVLNYGVCFC-GDENILVQEFVKFGSLDTYL---------KKNKNCINILWKLEVAKQ 121
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENILL--DENYRA------VVSDFGLS-KLMSRDQSR 266
+A A+ +L + ++H +V +NILL +E+ + +SD G+S ++ +D
Sbjct: 122 LAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD--- 175
Query: 267 CITTIRGTRGYLAPEWILE-QGVSEKCDIYSYGMVLLEL-TGGRRNVSLIEHGNDKSKNK 324
++ ++ PE I + ++ D +S+G L E+ +GG + +S ++ S+ K
Sbjct: 176 ---ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-----SQRK 227
Query: 325 WQYF 328
Q++
Sbjct: 228 LQFY 231
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENI-LLDENY---RAVVSDFGLSKLMSRDQSRCITTI 271
+ + YLH+ R+ H D+KPENI LLD+N R + DFG++ + + I
Sbjct: 117 ILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNI 171
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT ++APE + + + + D++S G++ L G
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENI-LLDENY---RAVVSDFGLSKLMSRDQSRCITTI 271
+ + YLH+ R+ H D+KPENI LLD+N R + DFG++ + + I
Sbjct: 124 ILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNI 178
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT ++APE + + + + D++S G++ L G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENI-LLDENY---RAVVSDFGLSKLMSRDQSRCITTI 271
+ + YLH+ R+ H D+KPENI LLD+N R + DFG++ + + I
Sbjct: 138 ILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNI 192
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT ++APE + + + + D++S G++ L G
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 219 ALSYLHNDCRSRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYL 278
+ +LH+ + ++H D+KP NI++ + + DFGL++ + S + TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYR 192
Query: 279 APEWILEQGVSEKCDIYSYGMVLLELT 305
APE IL G E DI+S G ++ E+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 143 FRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
F+ E+ + S H N++RL YLV E G L + E +
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYE-TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-- 109
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL---DENYRAVVSDFGLSKL 259
R+ DV A++Y H + V H D+KPEN L + + DFGL+
Sbjct: 110 --------RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ + T GT Y++P+ +LE +CD +S G+++ L G
Sbjct: 159 FK--PGKMMRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 31/126 (24%)
Query: 229 SRVLHLDVKPENILLDENYRAVVSDFGLSKLMSRDQ------------------------ 264
S ++H D+KP N LL+++ + DFGL++ ++ D+
Sbjct: 150 SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNL 209
Query: 265 SRCITTIRGTRGYLAPEWI-LEQGVSEKCDIYSYGMVLLELTGGRRNVSLIEHGNDKSKN 323
+ +T+ TR Y APE I L++ + DI+S G + EL ++ H N+ + N
Sbjct: 210 KKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS-----HINNPT-N 263
Query: 324 KWQYFP 329
++ FP
Sbjct: 264 RFPLFP 269
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 143 FRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQNGSLDHWIFPTSRRSEGHYSGG 202
F+ E+ + S H N++RL YLV E G L + E +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYE-TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-- 126
Query: 203 CLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPENILL---DENYRAVVSDFGLSKL 259
R+ DV A++Y H + V H D+KPEN L + + DFGL+
Sbjct: 127 --------RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Query: 260 MSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
+ + T GT Y++P+ +LE +CD +S G+++ L G
Sbjct: 176 FK--PGKMMRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENI-LLDENY---RAVVSDFGLSKLMSRDQSRCITTI 271
+ + YLH+ ++ H D+KPENI LLD N R + DFGL+ + D I
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNI 177
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT ++APE + + + + D++S G++ L G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENI-LLDENY---RAVVSDFGLSKLMSRDQSRCITTI 271
+ + YLH+ ++ H D+KPENI LLD N R + DFGL+ + D I
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNI 177
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT ++APE + + + + D++S G++ L G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 216 VAKALSYLHNDCRSRVLHLDVKPENI-LLDENY---RAVVSDFGLSKLMSRDQSRCITTI 271
+ + YLH+ ++ H D+KPENI LLD N R + DFGL+ + D I
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNI 177
Query: 272 RGTRGYLAPEWILEQGVSEKCDIYSYGMVLLELTGG 307
GT ++APE + + + + D++S G++ L G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,091,273
Number of Sequences: 62578
Number of extensions: 489826
Number of successful extensions: 3172
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 343
Number of HSP's that attempted gapping in prelim test: 1336
Number of HSP's gapped (non-prelim): 1135
length of query: 453
length of database: 14,973,337
effective HSP length: 102
effective length of query: 351
effective length of database: 8,590,381
effective search space: 3015223731
effective search space used: 3015223731
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)