Citrus Sinensis ID: 047277

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
MKTTSLLVVVGMMAMAAAVASHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLPSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSNSRSF
cccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccEEcccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcHHHHHHHHHHHHHccccc
cHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcEcEcccccccccccccEccccEcccccEccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHcccHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccccccccccEccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHcccccccccEcccccccccccccHHHHcccccccccccccccccccHcccccccccccccEcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccc
MKTTSLLVVVGMMAMAAAVASHDYGDALAKSILffegqrsgklppnqrmtwrkdsaledgfqigvdltggyydagdnvkfnfpmaFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLkatsipgivyaqvgepygdhdcwerpedmdtartpyavskqfpgseVSAEIAAALAASSIVFRSTDSTYAVKLLNRAKTVFVFADryrgsyndylgkwvcpfycdfsgyedELVWGAAWLYRAtkapnywnYVVENIYNlgsgrkitngvsssggsvtefgwdnknaGINVLVSRFINtinsnssnpfipkadtfvcsllpesptksvsyspggllfkpggsnlqhaTTLSFLLVVYSRYLKqanrdihcgnVVVNRARLVQVAKGQVDyilgsnplnmsymvgygknfpqrihhrssslpsvaqhtgkigcqdgtkyydsknsnpneltgavvggpdandsyadsrsdfvhsepttyinaPLVGLLAYFKSNSRSF
MKTTSLLVVVGMMAMAAAVASHDYGDALAKSILFFegqrsgklppnqRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIVFRSTDSTYAVKLLNRAKTVFVFADRYrgsyndylgKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRssslpsvaqhTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSNSRSF
MKTTSLLvvvgmmamaaavaSHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGsevsaeiaaalaassivFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENIYNLGSGRKITNgvsssggsvTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLPSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSNSRSF
*****LLVVVGMMAMAAAVASHDYGDALAKSILFFEG************TWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWER*********************VSAEIAAALAASSIVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLP********YSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRI************************************************************EPTTYINAPLVGLLAYF*******
*KTTSLLVVVGMMAMAAAVASHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLPSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSN****
MKTTSLLVVVGMMAMAAAVASHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIH*************GKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSNSRSF
MKTTSLLVVVGMMAMAAAVASHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLPSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSNSR**
iiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKTTSLLVVVGMMAMAAAVASHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLPSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSNSRSF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query498 2.2.26 [Sep-21-2011]
O49296489 Endoglucanase 4 OS=Arabid yes no 0.965 0.983 0.577 1e-167
Q9CAC1492 Endoglucanase 8 OS=Arabid no no 0.961 0.973 0.567 1e-166
Q69NF5515 Endoglucanase 23 OS=Oryza yes no 0.927 0.897 0.584 1e-161
Q652F9497 Endoglucanase 17 OS=Oryza no no 0.955 0.957 0.569 1e-156
O81416516 Endoglucanase 17 OS=Arabi no no 0.927 0.895 0.570 1e-155
Q8LQ92499 Endoglucanase 3 OS=Oryza no no 0.925 0.923 0.565 1e-154
Q6Z2J3508 Endoglucanase 6 OS=Oryza no no 0.943 0.925 0.578 1e-153
Q93YQ7497 Endoglucanase 24 OS=Arabi no no 0.933 0.935 0.566 1e-153
Q9SRX3501 Endoglucanase 1 OS=Arabid no no 0.919 0.914 0.583 1e-152
Q6YXT7523 Endoglucanase 19 OS=Oryza no no 0.929 0.885 0.532 1e-144
>sp|O49296|GUN4_ARATH Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1 Back     alignment and function desciption
 Score =  589 bits (1519), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 284/492 (57%), Positives = 356/492 (72%), Gaps = 11/492 (2%)

Query: 3   TTSLLVVVGMMAMAAAVASHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQ 62
           T ++++ + ++      A HDY DAL KSILFFEGQRSGKLPP+QR+ WR+DSAL DG  
Sbjct: 8   TPAIMLAMLLLISPETYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSS 67

Query: 63  IGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLK 122
            GVDLTGGYYDAGDNVKF FPMAF+TTM++WSV++FGK+M  +L++A+ AI+W TDY +K
Sbjct: 68  AGVDLTGGYYDAGDNVKFGFPMAFTTTMMSWSVIDFGKTMGPELENAVKAIKWGTDYLMK 127

Query: 123 ATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIV 182
           AT IP +V+ QVG+ Y DH+CWERPEDMDT RT Y + K   GSEV+ E AAALAA+SIV
Sbjct: 128 ATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDHSGSEVAGETAAALAAASIV 187

Query: 183 FRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLY 242
           F   D  Y+  LL+RA  VF FA +YRG+Y+D L + VCPFYCDF+GYEDEL+WGAAWL+
Sbjct: 188 FEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLYQAVCPFYCDFNGYEDELLWGAAWLH 247

Query: 243 RATKAPNYWNYVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTIN 302
           +A+K   Y  ++V+N             +  +G ++ EFGWDNK+AGINVLVS+ +    
Sbjct: 248 KASKKRVYREFIVKN-----------QVILRAGDTIHEFGWDNKHAGINVLVSKMVLMGK 296

Query: 303 SNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYL 362
           +     F   AD F+CSLLP      V YS GGLL K GGSN+QH T+LSFLL+ YS YL
Sbjct: 297 AEYFQSFKQNADEFICSLLPGISHPQVQYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYL 356

Query: 363 KQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLP 422
             AN+ + CG    + A L QVAK QVDYILG NP+ MSYMVGYG  FPQ+IHHR SS+P
Sbjct: 357 SHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGYGSRFPQKIHHRGSSVP 416

Query: 423 SVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINA 482
           SV  H  +IGC+DG++Y+ S N NPN L GAVVGGP+  D + DSR  F  +EPTTYINA
Sbjct: 417 SVVDHPDRIGCKDGSRYFFSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINA 476

Query: 483 PLVGLLAYFKSN 494
           PL+GLL YF ++
Sbjct: 477 PLLGLLGYFSAH 488

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q9CAC1|GUN8_ARATH Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|Q69NF5|GUN23_ORYSJ Endoglucanase 23 OS=Oryza sativa subsp. japonica GN=GLU12 PE=2 SV=1 Back     alignment and function description
>sp|Q652F9|GUN17_ORYSJ Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1 Back     alignment and function description
>sp|O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1 Back     alignment and function description
>sp|Q8LQ92|GUN3_ORYSJ Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z2J3|GUN6_ORYSJ Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1 Back     alignment and function description
>sp|Q93YQ7|GUN24_ARATH Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1 Back     alignment and function description
>sp|Q9SRX3|GUN1_ARATH Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1 Back     alignment and function description
>sp|Q6YXT7|GUN19_ORYSJ Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query498
255539747503 endo-1,4-beta-glucanase, putative [Ricin 0.981 0.972 0.760 0.0
224134476487 predicted protein [Populus trichocarpa] 0.967 0.989 0.751 0.0
449521796514 PREDICTED: LOW QUALITY PROTEIN: endogluc 0.979 0.949 0.698 0.0
449451852487 PREDICTED: endoglucanase 8-like [Cucumis 0.967 0.989 0.711 0.0
356544263489 PREDICTED: endoglucanase 8-like [Glycine 0.953 0.971 0.676 0.0
255539745506 endo-1,4-beta-glucanase, putative [Ricin 0.991 0.976 0.632 0.0
356531698487 PREDICTED: endoglucanase 8-like [Glycine 0.953 0.975 0.685 0.0
429326588490 korrigan [Populus tomentosa] 0.959 0.975 0.658 0.0
224134480490 predicted protein [Populus trichocarpa] 0.961 0.977 0.651 0.0
359490284507 PREDICTED: endoglucanase 8-like [Vitis v 0.951 0.934 0.679 0.0
>gi|255539747|ref|XP_002510938.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223550053|gb|EEF51540.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/493 (76%), Positives = 418/493 (84%), Gaps = 4/493 (0%)

Query: 6   LLVVVGMMAMAAAVA---SHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQ 62
           LL ++G + MA  VA   SHDYGDAL KSILFFEGQRSGKLPPNQRMTWRKDSAL DG+Q
Sbjct: 8   LLGLLGGIVMATVVAVVDSHDYGDALTKSILFFEGQRSGKLPPNQRMTWRKDSALRDGYQ 67

Query: 63  IGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLK 122
           IGVDL GGYYDAGDNVKFNFPMAFSTTMLAWSV+EFGK M  D +HAL+AI+WATDYFLK
Sbjct: 68  IGVDLVGGYYDAGDNVKFNFPMAFSTTMLAWSVVEFGKFMGPDQKHALEAIQWATDYFLK 127

Query: 123 ATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIV 182
           ATSIPG+V+AQVG+PYGDH+CWERPEDMDT RTPYAVSKQFPGSEVS EIAAALAA+SI 
Sbjct: 128 ATSIPGVVFAQVGDPYGDHNCWERPEDMDTPRTPYAVSKQFPGSEVSGEIAAALAAASIA 187

Query: 183 FRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLY 242
           FR ++  Y+ KLL RA+ +F FAD YRGSYN+ LG+WVCPFYCD+SGYEDEL+WGAAWLY
Sbjct: 188 FRPSNRAYSAKLLKRARMIFEFADTYRGSYNESLGQWVCPFYCDYSGYEDELIWGAAWLY 247

Query: 243 RATKAPNYWNYVVENIYNLGSG-RKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTI 301
           +ATK PNYWNYVV NI +L +   K  +GVS SGGS  EFGWD K+AGINVLVSR + + 
Sbjct: 248 KATKDPNYWNYVVNNIKDLENAVVKNIDGVSYSGGSFAEFGWDAKHAGINVLVSRLLKSA 307

Query: 302 NSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRY 361
            ++S +PFIP AD FVCS+LPESPT SVSYSPGG LFKPGGSN QHAT LSFLL+ YSRY
Sbjct: 308 KASSLDPFIPNADKFVCSVLPESPTVSVSYSPGGFLFKPGGSNSQHATALSFLLLAYSRY 367

Query: 362 LKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSL 421
           L QANR IHCGNVV   ARLVQ A+ QVDYILGSNP+ MSYMVGYG+ FP RIHHR SSL
Sbjct: 368 LNQANRVIHCGNVVATSARLVQFARIQVDYILGSNPMKMSYMVGYGQKFPLRIHHRGSSL 427

Query: 422 PSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYIN 481
           PSV QH G+I CQ GT YY+S N +PN L GAVVGGPD  DSYADSR DFVHSEPTTYIN
Sbjct: 428 PSVNQHPGRIDCQGGTPYYNSNNPDPNLLVGAVVGGPDVKDSYADSRPDFVHSEPTTYIN 487

Query: 482 APLVGLLAYFKSN 494
           APLVG+LAYF+S+
Sbjct: 488 APLVGVLAYFRSH 500

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224134476|ref|XP_002321833.1| predicted protein [Populus trichocarpa] gi|222868829|gb|EEF05960.1| predicted protein [Populus trichocarpa] gi|347466565|gb|AEO97195.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466619|gb|AEO97222.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|429326586|gb|AFZ78633.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|449521796|ref|XP_004167915.1| PREDICTED: LOW QUALITY PROTEIN: endoglucanase 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449451852|ref|XP_004143674.1| PREDICTED: endoglucanase 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356544263|ref|XP_003540573.1| PREDICTED: endoglucanase 8-like [Glycine max] Back     alignment and taxonomy information
>gi|255539745|ref|XP_002510937.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223550052|gb|EEF51539.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356531698|ref|XP_003534413.1| PREDICTED: endoglucanase 8-like [Glycine max] Back     alignment and taxonomy information
>gi|429326588|gb|AFZ78634.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|224134480|ref|XP_002321834.1| predicted protein [Populus trichocarpa] gi|222868830|gb|EEF05961.1| predicted protein [Populus trichocarpa] gi|347466567|gb|AEO97196.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466621|gb|AEO97223.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359490284|ref|XP_002264822.2| PREDICTED: endoglucanase 8-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query498
TAIR|locus:2028015489 GH9B6 "glycosyl hydrolase 9B6" 0.927 0.944 0.572 9e-148
TAIR|locus:2033600492 GH9B1 "glycosyl hydrolase 9B1" 0.929 0.941 0.559 3.9e-147
TAIR|locus:2120242497 GH9B18 "glycosyl hydrolase 9B1 0.933 0.935 0.543 8e-140
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.917 0.912 0.559 1.3e-139
TAIR|locus:2137824516 GH9B13 "glycosyl hydrolase 9B1 0.921 0.889 0.551 1.7e-139
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.461 0.480 0.544 1.8e-131
TAIR|locus:2118519478 GH9B14 "glycosyl hydrolase 9B1 0.461 0.481 0.531 1.8e-131
TAIR|locus:2017704484 CEL5 "cellulase 5" [Arabidopsi 0.925 0.952 0.514 3.2e-129
TAIR|locus:2120232493 GH9B17 "glycosyl hydrolase 9B1 0.927 0.937 0.492 1.4e-126
TAIR|locus:2825314484 CEL3 "cellulase 3" [Arabidopsi 0.909 0.935 0.511 7.8e-126
TAIR|locus:2028015 GH9B6 "glycosyl hydrolase 9B6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1443 (513.0 bits), Expect = 9.0e-148, P = 9.0e-148
 Identities = 271/473 (57%), Positives = 331/473 (69%)

Query:    22 HDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFN 81
             HDY DAL KSILFFEGQRSGKLPP+QR+ WR+DSAL DG   GVDLTGGYYDAGDNVKF 
Sbjct:    27 HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAGDNVKFG 86

Query:    82 FPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDH 141
             FPMAF+TTM++WSV++FGK+M  +L++A+ AI+W TDY +KAT IP +V+ QVG+ Y DH
Sbjct:    87 FPMAFTTTMMSWSVIDFGKTMGPELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDH 146

Query:   142 DCWERPEDMDTARTPYAVSKQFPGXXXXXXXXXXXXXXXXXFRSTDSTYAVKLLNRAKTV 201
             +CWERPEDMDT RT Y + K   G                 F   D  Y+  LL+RA  V
Sbjct:   147 NCWERPEDMDTLRTVYKIDKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRV 206

Query:   202 FVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENIYNL 261
             F FA +YRG+Y+D L + VCPFYCDF+GYEDEL+WGAAWL++A+K   Y  ++V+N   L
Sbjct:   207 FAFAQKYRGAYSDSLYQAVCPFYCDFNGYEDELLWGAAWLHKASKKRVYREFIVKNQVIL 266

Query:   262 GSGRKITNXXXXXXXXXTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLL 321
              +G  I            EFGWDNK+AGINVLVS+ +    +     F   AD F+CSLL
Sbjct:   267 RAGDTIH-----------EFGWDNKHAGINVLVSKMVLMGKAEYFQSFKQNADEFICSLL 315

Query:   322 PESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARL 381
             P      V YS GGLL K GGSN+QH T+LSFLL+ YS YL  AN+ + CG    + A L
Sbjct:   316 PGISHPQVQYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALL 375

Query:   382 VQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLPSVAQHTGKIGCQDGTKYYD 441
              QVAK QVDYILG NP+ MSYMVGYG  FPQ+IHHR SS+PSV  H  +IGC+DG++Y+ 
Sbjct:   376 RQVAKRQVDYILGDNPMKMSYMVGYGSRFPQKIHHRGSSVPSVVDHPDRIGCKDGSRYFF 435

Query:   442 SKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSN 494
             S N NPN L GAVVGGP+  D + DSR  F  +EPTTYINAPL+GLL YF ++
Sbjct:   436 SNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLLGYFSAH 488
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
TAIR|locus:2033600 GH9B1 "glycosyl hydrolase 9B1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120242 GH9B18 "glycosyl hydrolase 9B18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118519 GH9B14 "glycosyl hydrolase 9B14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017704 CEL5 "cellulase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120232 GH9B17 "glycosyl hydrolase 9B17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825314 CEL3 "cellulase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O49296GUN4_ARATH3, ., 2, ., 1, ., 40.57720.96580.9836yesno
P05522GUN1_PERAE3, ., 2, ., 1, ., 40.52240.95980.9676N/Ano
Q69NF5GUN23_ORYSJ3, ., 2, ., 1, ., 40.58490.92770.8970yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.946
3rd Layer3.2.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_XV0985
hypothetical protein (487 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query498
PLN02308492 PLN02308, PLN02308, endoglucanase 0.0
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN03009495 PLN03009, PLN03009, cellulase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
PLN02175484 PLN02175, PLN02175, endoglucanase 0.0
PLN02171 629 PLN02171, PLN02171, endoglucanase 0.0
PLN02340 614 PLN02340, PLN02340, endoglucanase 1e-174
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-173
PLN00119489 PLN00119, PLN00119, endoglucanase 1e-173
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-167
PLN02345469 PLN02345, PLN02345, endoglucanase 1e-166
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information 
 Score =  664 bits (1715), Expect = 0.0
 Identities = 290/495 (58%), Positives = 364/495 (73%), Gaps = 11/495 (2%)

Query: 1   MKTTSLLVVVGMMAMAAAVASHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDG 60
           +   ++++++ + +     A HDY DAL KSILFFEGQRSGKLPP+QR+ WR+DSAL DG
Sbjct: 6   LAAPAIVLLLLLFSPPVIGAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALHDG 65

Query: 61  FQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGKSMESDLQHALDAIRWATDYF 120
              GVDLTGGYYDAGDNVKF FPMAF+TT+++WS+++FG++M  +L++A+ A++WATDY 
Sbjct: 66  SSAGVDLTGGYYDAGDNVKFGFPMAFTTTLMSWSIIDFGRTMGPELENAVKAVKWATDYL 125

Query: 121 LKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASS 180
           +KAT+IP +VY QVG+ Y DH+CWERPEDMDT RT Y +    PGS+V+ E AAALAA+S
Sbjct: 126 MKATAIPNVVYVQVGDAYSDHNCWERPEDMDTLRTVYKIDPSHPGSDVAGETAAALAAAS 185

Query: 181 IVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAW 240
           IVFR  D  Y+  LL+RA  VF FAD+YRG+Y+  L   VCPFYCDF+GY+DEL+WGAAW
Sbjct: 186 IVFRKRDPAYSRLLLDRAVRVFAFADKYRGAYSSSLHAAVCPFYCDFNGYQDELLWGAAW 245

Query: 241 LYRATKAPNYWNYVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINT 300
           L++A++   Y  Y+V+N   LG+G  I            EFGWDNK+AGINVL+S+ +  
Sbjct: 246 LHKASRRREYREYIVKNEVILGAGDTI-----------NEFGWDNKHAGINVLISKEVLM 294

Query: 301 INSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSR 360
             +     F   AD F+CSLLP      V YSPGGLLFK GGSN+QH T+LSFLL+ YS 
Sbjct: 295 GKAEYFQSFKQNADGFICSLLPGISHPQVQYSPGGLLFKVGGSNMQHVTSLSFLLLAYSN 354

Query: 361 YLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSS 420
           YL  AN+ + CG    + A L QVAK QVDYILG NPL MSYMVGYG  FPQRIHHR SS
Sbjct: 355 YLSHANKVVPCGESTASPALLRQVAKRQVDYILGDNPLRMSYMVGYGSRFPQRIHHRGSS 414

Query: 421 LPSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYI 480
           LPSVA H  +IGC++G++Y+ S N NPN L GAVVGGP+  D++ DSR  F  SEPTTYI
Sbjct: 415 LPSVAAHPARIGCKEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYI 474

Query: 481 NAPLVGLLAYFKSNS 495
           NAPLVGLLAYF ++ 
Sbjct: 475 NAPLVGLLAYFSAHP 489

Length = 492
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 498
PLN02266510 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN03009495 cellulase 100.0
PLN02420525 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.16
KOG2787403 consensus Lanthionine synthetase C-like protein 1 95.87
COG1331667 Highly conserved protein containing a thioredoxin 95.15
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 94.45
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 94.32
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 94.26
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 88.26
cd02892634 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; 84.07
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 82.68
>PLN02266 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=1.1e-123  Score=984.07  Aligned_cols=470  Identities=58%  Similarity=1.007  Sum_probs=434.6

Q ss_pred             hhcchHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHHH
Q 047277           17 AAVASHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVL   96 (498)
Q Consensus        17 ~~i~~~~Y~~~l~~sl~ff~~QR~G~lp~~~~~~w~~~s~~~Dg~~~~~d~~GGW~DAGD~~K~~~~~a~s~~~L~~a~~   96 (498)
                      -+|++++|.++|++||+||++||||++|+.++++||++|++.||.+.++||+|||||||||+||++|+++++++|+|+++
T Consensus        40 ~~~~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~s~t~L~w~~~  119 (510)
T PLN02266         40 PRLASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVI  119 (510)
T ss_pred             CCCCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCcCcccCCCcceeCCCCceecchHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCcchHHHHHHHHHHHHHHHHHcCCCCceeEEEecCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHH
Q 047277           97 EFGKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAAL  176 (498)
Q Consensus        97 e~~~~~~~~~~dlLde~kwg~d~llk~~~~~g~~y~~Vg~~~~dh~~w~~P~~~~~~R~~~~~~~~~p~t~~~~~~aAal  176 (498)
                      ||++.|.+++||||||+||++|||||||+.+|.||+|||++++||.+|++||+++.+|++|.++.++|||++++++||||
T Consensus       120 ef~~~~~~~~pd~Ldelkw~~D~llk~~~~~~~vy~qVg~~~~Dh~~W~~Pe~~~~~R~~y~i~~~~pgsd~a~e~AAAL  199 (510)
T PLN02266        120 EFGGLMKSELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKDHACWERPEDMDTPRSVFKVDKNTPGSDVAAETAAAL  199 (510)
T ss_pred             hhhhccccccHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCCCcccCCChhhcCCCCeeEEeCCCCCchHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhchhcccCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCccccccCCCCcchHHHHHHHHHHHHcCCchhHHHHHH
Q 047277          177 AASSIVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVE  256 (498)
Q Consensus       177 A~as~v~~~~d~~~A~~~l~~A~~~~~~a~~~~~~~~~~~~~~~~~~Y~~~~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~  256 (498)
                      |+||||||++||+||++||++||++|+||+++|+.|.+.+.....++|.+.+++.||++|||+|||++|||++|+++++.
T Consensus       200 Aaas~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~~~~~~~~y~s~s~~~DEl~WAAawLy~ATGd~~Yl~~~~~  279 (510)
T PLN02266        200 AAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDVCPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQV  279 (510)
T ss_pred             HHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCcccCCCcccCCcchHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999999999999999999999999876543224578887578999999999999999999999999987


Q ss_pred             hhhhcCCCccccCCCCCCCCCccccccCchhhHHHHHhccccccccccchhhHHHHHHHHHHhhCCCCCCCccccCCCCc
Q 047277          257 NIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGL  336 (498)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~  336 (498)
                      ....          ++. ....+.++||++..|+++||++....+....++.+++.++.++|.+.+++++..+++||||+
T Consensus       280 ~~~~----------~g~-~~~~~~~~WD~k~~ga~vLLa~~~~~~~~~~~~~yk~~~d~~~~~~~~~~~~~~~~~TpGGL  348 (510)
T PLN02266        280 NGQI----------LGA-DEFDNTFGWDNKHVGARILLSKAFLVQKVQSLHEYKGHADNFICSVIPGAPFSSTQYTPGGL  348 (510)
T ss_pred             HHhh----------ccc-cccCCccCcchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhccCCCCCCccccCCCee
Confidence            6532          111 12246799999999999999885443333466789999999999988888876789999999


Q ss_pred             ccccCCCcHHHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHhcccccccCCCCCcceEeeeCCCCCCCCcc
Q 047277          337 LFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHH  416 (498)
Q Consensus       337 ~w~~~~~n~~~~~naa~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~q~dYlLG~Np~~~SyVtG~G~~~p~~pHH  416 (498)
                      .|+.+|+|+||+++++||+++|++++...+..+.||+...+..+|+++|++|||||||+||+++|||||||.|+|++|||
T Consensus       349 ~~~~~wg~lrYa~~~afla~vya~~l~~~~~~~~cg~~~~~~~~~~~fA~~QidYiLG~NP~~~SyvVG~G~~~P~~pHH  428 (510)
T PLN02266        349 LFKMSDSNMQYVTSTSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHH  428 (510)
T ss_pred             EEeCCCCcHHHHHHHHHHHHHHHHHHHhcCCceecCCCccCHHHHHHHHHhhhceeccCCCCCCceEEecCCCCCccccc
Confidence            99999999999999999999999999877777899987788899999999999999999999999999999999999999


Q ss_pred             cCCCCCccccCCCccccCCCCccccCCCCCCCCcccccccCCCCCCCcccCCCCcccCcccccCchHHHHHHHHhhhcCC
Q 047277          417 RSSSLPSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSNSR  496 (498)
Q Consensus       417 R~a~~~~~~~~~~~~~~~~g~~~~~~~~p~~~~~~GaLvGGPn~~d~y~D~~~~y~~nEvaid~NA~lv~~lA~l~~~~~  496 (498)
                      |.||||++..+|.+++|.+|++|++++.||||+|.|||||||+..|.|.|+|.+|++|||||||||+||++||+|.+.-.
T Consensus       429 R~as~p~~~~~~~~~~C~~g~~~~~~~~~n~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~~~yg  508 (510)
T PLN02266        429 RGSSLPSVAAHPAKIQCSQGFSIMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDYEQSEPATYINAPLVGALAYLAHSYG  508 (510)
T ss_pred             cCCCCCCcccCccccCCCCCccccCCCCCCcceecceeecCCCCCCCCCccccccccCcceeecchHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987544


Q ss_pred             C
Q 047277          497 S  497 (498)
Q Consensus       497 ~  497 (498)
                      |
T Consensus       509 ~  509 (510)
T PLN02266        509 Q  509 (510)
T ss_pred             C
Confidence            3

>PLN02308 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query498
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 2e-76
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 4e-72
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 9e-62
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 5e-61
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 5e-61
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 1e-56
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 1e-50
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 2e-37
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 6e-05
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  283 bits (723), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 178/477 (37%), Positives = 244/477 (51%), Gaps = 60/477 (12%)
Query: 21  SHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKF 80
           ++DY   L  S+LF+E QRSG+LP +Q++TWRKDSAL D    G DLTGGY+DAGD VKF
Sbjct: 2   AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKF 61
Query: 81  NFPMAFSTTMLAWSVLEF--GKSMESDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPY 138
            FPMA++ T+LAW +++F  G S    L     A++WATDYF+KA +     Y QVG+  
Sbjct: 62  GFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGD 121
Query: 139 GDHDCWERPEDMDTARTPYAVSKQFPGXXXXXXXXXXXXXXXXXFRSTDSTYAVKLLNRA 198
            DH  W RPEDM  AR  Y +    PG                 FR+ D TY+  LL  A
Sbjct: 122 ADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHA 181
Query: 199 KTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENI 258
           + +F FA+ YRG Y+D +      FY   + Y DELVW AAWLYRAT    Y N   E++
Sbjct: 182 RQLFDFANNYRGKYSDSITD-ARNFYAS-ADYRDELVWAAAWLYRATNDNTYLN-TAESL 238
Query: 259 Y------NLGSGRKITNXXXXXXXXXTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPK 312
           Y      N G G                  WD+K +G+ VL+++  N         +   
Sbjct: 239 YDEFGLQNWGGG----------------LNWDSKVSGVQVLLAKLTN------KQAYKDT 276
Query: 313 ADTFVCSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCG 372
             ++V  L+          +P GLL+      L+HA   +F++             +   
Sbjct: 277 VQSYVNYLINNQQK-----TPKGLLYIDMWGTLRHAANAAFIM-------------LEAA 318
Query: 373 NVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLPSVAQHTGKIG 432
            + ++ +   Q A+ Q+DY LG      S++ G+G N P R HHRSSS P          
Sbjct: 319 ELGLSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPA-----PAT 371
Query: 433 CQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLA 489
           C   T  ++S + N + L+GA+VGGPD ND+Y D RSD+VH+E  T  NA     LA
Sbjct: 372 CDWNT--FNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALA 426
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query498
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-171
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-169
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-168
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-166
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-161
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-156
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-151
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-137
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-133
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 5e-72
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
 Score =  494 bits (1272), Expect = e-171
 Identities = 180/475 (37%), Positives = 247/475 (52%), Gaps = 39/475 (8%)

Query: 20  ASHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVK 79
            + +Y +AL KS+ F+E QRSGKLP N R++WR DS L DG  +G+DLTGG+YDAGD+VK
Sbjct: 2   PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVK 61

Query: 80  FNFPMAFSTTMLAWSVLEFGKSMES--DLQHALDAIRWATDYFLKATSIPGIVYAQVGEP 137
           F FPMAF+ TMLAW  +E  +       + +  D +RW  DYF+KA   P ++Y QVG+ 
Sbjct: 62  FGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDG 121

Query: 138 YGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIVFRSTDSTYAVKLLNR 197
             DH  W   E M   R  + V    PGS+V+AE AAA+AASSIVF   D  YA  L+  
Sbjct: 122 DADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQH 181

Query: 198 AKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVEN 257
           AK ++ FAD YRG Y+D +      FY  +SGY+DELVWGA WLY+AT   +Y       
Sbjct: 182 AKQLYTFADTYRGVYSDCVP--AGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYE 239

Query: 258 IYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFV 317
              L      T   +          WD+K+ G  VL+++            +I  A+ ++
Sbjct: 240 YDFLS-----TEQQTDLRSYRWTIAWDDKSYGTYVLLAK------ETGKQKYIDDANRWL 288

Query: 318 CSLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVN 377
                    + V YSPGG+        L++A   +F+ +VY++ +    R          
Sbjct: 289 DYWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPVRK--------- 339

Query: 378 RARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLPSVAQHTGKIGCQDGT 437
             R    A  Q++Y LG NP N SY+VG+G N P+  HHR++                 T
Sbjct: 340 -QRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH-------------GSWT 385

Query: 438 KYYDSKNSNPNELTGAVVGGPDA-NDSYADSRSDFVHSEPTTYINAPLVGLLAYF 491
               S   N + L GA+VGGP + ND+Y D R D+V +E  T  NA     LA  
Sbjct: 386 DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAML 440
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query498
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 96.0
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 95.79
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.29
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 94.47
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 92.86
3k11_A445 Putative glycosyl hydrolase; structural genomics, 92.24
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 92.01
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 90.04
3pmm_A382 Putative cytoplasmic protein; structural genomics, 88.5
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 87.08
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 85.83
3pmm_A382 Putative cytoplasmic protein; structural genomics, 85.77
1nc5_A373 Hypothetical protein YTER; structural genomics, he 84.64
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 84.23
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 81.05
1nc5_A373 Hypothetical protein YTER; structural genomics, he 80.63
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
Probab=100.00  E-value=1.2e-109  Score=880.77  Aligned_cols=441  Identities=37%  Similarity=0.618  Sum_probs=385.0

Q ss_pred             hhhcchHHHHHHHHHHHHHHHHhcCCCC-CCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHH
Q 047277           16 AAAVASHDYGDALAKSILFFEGQRSGKL-PPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWS   94 (498)
Q Consensus        16 ~~~i~~~~Y~~~l~~sl~ff~~QR~G~l-p~~~~~~w~~~s~~~Dg~~~~~d~~GGW~DAGD~~K~~~~~a~s~~~L~~a   94 (498)
                      ++..+.++|.++|++||+||++||||.+ |+.++++||++||++||++.++||+|||||||||+||++|+++++++|+|+
T Consensus        18 ~~~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~   97 (466)
T 2xfg_A           18 PPATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWA   97 (466)
T ss_dssp             ---CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHH
Confidence            4567789999999999999999999998 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCc--chHHHHHHHHHHHHHHHHHcCCCCceeEEEecCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHH
Q 047277           95 VLEFGKSME--SDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEI  172 (498)
Q Consensus        95 ~~e~~~~~~--~~~~dlLde~kwg~d~llk~~~~~g~~y~~Vg~~~~dh~~w~~P~~~~~~R~~~~~~~~~p~t~~~~~~  172 (498)
                      ++||++.|+  +++||||||||||+||||||++++|.||+|||++..||.+|++||+++.+|++|.++.++|+|++++++
T Consensus        98 ~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~  177 (466)
T 2xfg_A           98 VYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAET  177 (466)
T ss_dssp             HHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHH
T ss_pred             HHHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHH
Confidence            999999996  789999999999999999999999999999999999999999999999999999999899999999999


Q ss_pred             HHHHHHhchhcccCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCccccccCCCCcchHHHHHHHHHHHHcCCchhHH
Q 047277          173 AAALAASSIVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWN  252 (498)
Q Consensus       173 aAalA~as~v~~~~d~~~A~~~l~~A~~~~~~a~~~~~~~~~~~~~~~~~~Y~~~~~~~De~~wAA~~Ly~aTg~~~Y~~  252 (498)
                      |||||+||||||++||+||++||++||++|+||+++|+.|...   ..+++|+|.+++.||++|||+|||++|||.+|++
T Consensus       178 AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~---~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~  254 (466)
T 2xfg_A          178 SAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYT---AANGFYNSWSGFYDELSWAAVWLYLATNDSSYLD  254 (466)
T ss_dssp             HHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCC---TTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHH
T ss_pred             HHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCC---ccccccCCCCCCchHHHHHHHHHHHHhCCHHHHH
Confidence            9999999999999999999999999999999999999988432   2568999988999999999999999999999999


Q ss_pred             HHHHhhhhcCCCccccCCCCCCCCCccccccCchhhHHHHHhccccccccc-cchhhHHHHHHHHHHhhCCCCCCCcccc
Q 047277          253 YVVENIYNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINS-NSSNPFIPKADTFVCSLLPESPTKSVSY  331 (498)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~-~~~~~~~~~ad~~~~~~~~~~~~~~~~~  331 (498)
                      +++++...+..    ...... ....+.|+||++..++.+||++.  .+.. ..++.++..++.++|    +.+..++++
T Consensus       255 ~a~~~~~~~~~----~~~~~~-~~~~~~~~Wd~~~~g~~~lla~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  323 (466)
T 2xfg_A          255 KAESYSDKWGY----EPQTNI-PKYKWAQCWDDVTYGTYLLLARI--KNDNGKYKEAIERHLDWWTT----GYNGERITY  323 (466)
T ss_dssp             HHHHTTTTSCB----STTSSS-BCCSSCCBTTBCHHHHHHHHHHH--HCSSCHHHHHHHHHHHHHTT----CBTTBCCCB
T ss_pred             HHHHHHHHhcc----cccccc-ccccCcCCcchhHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHh----ccCCCcccc
Confidence            99987642210    000000 12246799999999999888764  2222 234445555554443    333347889


Q ss_pred             CCCCcccccCCCcHHHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHhcccccccCCCCCcceEeeeCCCCC
Q 047277          332 SPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFP  411 (498)
Q Consensus       332 t~~g~~w~~~~~n~~~~~naa~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~q~dYlLG~Np~~~SyVtG~G~~~p  411 (498)
                      ||+|+.|...|+|++|++|++||+++|++++.       |+  ..++++|+++|++|||||||+|  ++|||||||+|+|
T Consensus       324 tp~Gl~~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p  392 (466)
T 2xfg_A          324 TPKGLAWLDQWGSLRYATTTAFLACVYSDWEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPP  392 (466)
T ss_dssp             CTTSCBCCCSSSHHHHHHHHHHHHHHHHTCTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCC
T ss_pred             CCccccccCCCCchHHHHHHHHHHHHHHHhcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCC
Confidence            99999999999999999999999999987542       32  2357899999999999999999  9999999999999


Q ss_pred             CCCcccCCCCCccccCCCccccCCCCccccCCCCCCCCcccccccCCCCCCCcccCCCCcccCcccccCchHHHHHHHHh
Q 047277          412 QRIHHRSSSLPSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPDANDSYADSRSDFVHSEPTTYINAPLVGLLAYF  491 (498)
Q Consensus       412 ~~pHHR~a~~~~~~~~~~~~~~~~g~~~~~~~~p~~~~~~GaLvGGPn~~d~y~D~~~~y~~nEvaid~NA~lv~~lA~l  491 (498)
                      ++||||.++||..             .+++.|.|+|++++|+||||||..|+|.|+|.+|++|||||||||+||++||+|
T Consensus       393 ~~pHHR~ss~~~~-------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l  459 (466)
T 2xfg_A          393 KRPHHRTAHGSWA-------------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKM  459 (466)
T ss_dssp             SCCSCHHHHTCSS-------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHH
T ss_pred             CCCcCchhccCcc-------------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHH
Confidence            9999999988653             134578899999999999999999999999999999999999999999999999


Q ss_pred             hhc
Q 047277          492 KSN  494 (498)
Q Consensus       492 ~~~  494 (498)
                      ...
T Consensus       460 ~~~  462 (466)
T 2xfg_A          460 YKL  462 (466)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 498
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-168
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-158
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-152
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-148
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-122
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-111
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  481 bits (1238), Expect = e-168
 Identities = 180/474 (37%), Positives = 247/474 (52%), Gaps = 39/474 (8%)

Query: 21  SHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKF 80
           + +Y +AL KS+ F+E QRSGKLP N R++WR DS L DG  +G+DLTGG+YDAGD+VKF
Sbjct: 3   AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKF 62

Query: 81  NFPMAFSTTMLAWSVLEFGKSMES--DLQHALDAIRWATDYFLKATSIPGIVYAQVGEPY 138
            FPMAF+ TMLAW  +E  +       + +  D +RW  DYF+KA   P ++Y QVG+  
Sbjct: 63  GFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGD 122

Query: 139 GDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAASSIVFRSTDSTYAVKLLNRA 198
            DH  W   E M   R  + V    PGS+V+AE AAA+AASSIVF   D  YA  L+  A
Sbjct: 123 ADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHA 182

Query: 199 KTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENI 258
           K ++ FAD YRG Y+D +      FY  +SGY+DELVWGA WLY+AT   +Y        
Sbjct: 183 KQLYTFADTYRGVYSDCVP--AGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEY 240

Query: 259 YNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVC 318
             L      T   +          WD+K+ G  VL+++            +I  A+ ++ 
Sbjct: 241 DFLS-----TEQQTDLRSYRWTIAWDDKSYGTYVLLAK------ETGKQKYIDDANRWLD 289

Query: 319 SLLPESPTKSVSYSPGGLLFKPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNR 378
                   + V YSPGG+        L++A   +F+ +VY++ +    R           
Sbjct: 290 YWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPVRK---------- 339

Query: 379 ARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRSSSLPSVAQHTGKIGCQDGTK 438
            R    A  Q++Y LG NP N SY+VG+G N P+  HHR++                 T 
Sbjct: 340 QRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS-------------WTD 386

Query: 439 YYDSKNSNPNELTGAVVGGPDA-NDSYADSRSDFVHSEPTTYINAPLVGLLAYF 491
              S   N + L GA+VGGP + ND+Y D R D+V +E  T  NA     LA  
Sbjct: 387 SIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAML 440
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query498
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 92.36
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 90.8
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 86.98
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 85.85
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 82.73
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=3e-104  Score=841.38  Aligned_cols=438  Identities=40%  Similarity=0.689  Sum_probs=380.5

Q ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchHHHHHHHHHHHHHhhh
Q 047277           21 SHDYGDALAKSILFFEGQRSGKLPPNQRMTWRKDSALEDGFQIGVDLTGGYYDAGDNVKFNFPMAFSTTMLAWSVLEFGK  100 (498)
Q Consensus        21 ~~~Y~~~l~~sl~ff~~QR~G~lp~~~~~~w~~~s~~~Dg~~~~~d~~GGW~DAGD~~K~~~~~a~s~~~L~~a~~e~~~  100 (498)
                      +.+|.++|++||+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++++++++++|+|++++||+
T Consensus         3 ~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~~   82 (460)
T d1tf4a1           3 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPE   82 (460)
T ss_dssp             SSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHH
T ss_pred             CCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHChH
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCc--chHHHHHHHHHHHHHHHHHcCCCCceeEEEecCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHH
Q 047277          101 SME--SDLQHALDAIRWATDYFLKATSIPGIVYAQVGEPYGDHDCWERPEDMDTARTPYAVSKQFPGSEVSAEIAAALAA  178 (498)
Q Consensus       101 ~~~--~~~~dlLde~kwg~d~llk~~~~~g~~y~~Vg~~~~dh~~w~~P~~~~~~R~~~~~~~~~p~t~~~~~~aAalA~  178 (498)
                      .|.  +++||||||+|||+|||+|||+++|.||+|||++..||..|++|+.++.+|+.+.+...+|+|++++.+|||||+
T Consensus        83 ~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA~  162 (460)
T d1tf4a1          83 GYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAA  162 (460)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHH
T ss_pred             hhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHHH
Confidence            987  889999999999999999999999999999999989999999999999999999888888999999999999999


Q ss_pred             hchhcccCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCccccccCCCCcchHHHHHHHHHHHHcCCchhHHHHHHhh
Q 047277          179 SSIVFRSTDSTYAVKLLNRAKTVFVFADRYRGSYNDYLGKWVCPFYCDFSGYEDELVWGAAWLYRATKAPNYWNYVVENI  258 (498)
Q Consensus       179 as~v~~~~d~~~A~~~l~~A~~~~~~a~~~~~~~~~~~~~~~~~~Y~~~~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~~  258 (498)
                      |||||++.||+||++||++||++|+||+++|+.|.+..+. +..+|.+ +++.||++|||+|||++|||++|+++++...
T Consensus       163 as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~-~~~~~~~-~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~  240 (460)
T d1tf4a1         163 SSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPA-GAFYNSW-SGYQDELVWGAYWLYKATGDDSYLAKAEYEY  240 (460)
T ss_dssp             HHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTT-HHHHCCS-SCSHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCcCCCc-cccchHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence            9999999999999999999999999999999998766542 3334555 8899999999999999999999999999876


Q ss_pred             hhcCCCccccCCCCCCCCCccccccCchhhHHHHHhccccccccccchhhHHHHHHHHHHhhCCCCCCCccccCCCCccc
Q 047277          259 YNLGSGRKITNGVSSSGGSVTEFGWDNKNAGINVLVSRFINTINSNSSNPFIPKADTFVCSLLPESPTKSVSYSPGGLLF  338 (498)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w  338 (498)
                      ..+...    ...+. ....+.++|+++..+..+++++..      .+..+++.++.+++.+........++++++++.|
T Consensus       241 ~~~~~~----~~~~~-~~~~~~~~w~~~~~~~~~~la~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (460)
T d1tf4a1         241 DFLSTE----QQTDL-RSYRWTIAWDDKSYGTYVLLAKET------GKQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAV  309 (460)
T ss_dssp             GGSCBC----TTSSC-BCCSSCCSSSCCHHHHHHHHHHHH------CCHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBC
T ss_pred             hhcccc----ccccc-ccccccccccchhHHHHHHHHHHh------hhhHHHHHHHHHHHHHhhhcccccCCcCCCccee
Confidence            533211    11111 123457899999888877765422      1345666777777655544333456678888888


Q ss_pred             ccCCCcHHHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHhcccccccCCCCCcceEeeeCCCCCCCCcccC
Q 047277          339 KPGGSNLQHATTLSFLLVVYSRYLKQANRDIHCGNVVVNRARLVQVAKGQVDYILGSNPLNMSYMVGYGKNFPQRIHHRS  418 (498)
Q Consensus       339 ~~~~~n~~~~~naa~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~q~dYlLG~Np~~~SyVtG~G~~~p~~pHHR~  418 (498)
                      ...|++.+++.|.+++++++++++..          ..++++|+++|++|||||||+||+++|||||+|+|+|++||||.
T Consensus       310 ~~~WGsn~~~~n~a~~~~~a~~~~~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~  379 (460)
T d1tf4a1         310 LDTWGALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRT  379 (460)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHH
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHhcc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCcc
Confidence            88899999999999999998875432          12467999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCccccCCCCccccCCCCCCCCcccccccCCC-CCCCcccCCCCcccCcccccCchHHHHHHHHhhhc
Q 047277          419 SSLPSVAQHTGKIGCQDGTKYYDSKNSNPNELTGAVVGGPD-ANDSYADSRSDFVHSEPTTYINAPLVGLLAYFKSN  494 (498)
Q Consensus       419 a~~~~~~~~~~~~~~~~g~~~~~~~~p~~~~~~GaLvGGPn-~~d~y~D~~~~y~~nEvaid~NA~lv~~lA~l~~~  494 (498)
                      ++|+..             +++..+.|+|++++|+|||||| +.+||+|++++|++|||||||||+||++||+|++.
T Consensus       380 s~~~~~-------------~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~  443 (460)
T d1tf4a1         380 AHGSWT-------------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE  443 (460)
T ss_dssp             HHTCSS-------------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHH
T ss_pred             ccCCCc-------------cccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            887543             2455688999999999999999 57999999999999999999999999999999875
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure