BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047278
QALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV
MFRSPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKY
MLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV
SMMLTAYGAAILVGASSSFPLSKLVTVICHSILAFILWLRAKTVDLSSNASTLSFYMFIW
KTQLVSLKWKGI

High Scoring Gene Products

Symbol, full name Information P value
HPT1
homogentisate phytyltransferase 1
protein from Arabidopsis thaliana 3.9e-60
SfN8DT-2
Naringenin 8-dimethylallyltransferase
protein from Sophora flavescens 9.2e-52
N8DT-1
Naringenin 8-dimethylallyltransferase 1, chloroplastic
protein from Sophora flavescens 1.9e-51
HST
homogentisate prenyltransferase
protein from Arabidopsis thaliana 4.8e-23
G4 protein from Arabidopsis thaliana 9.7e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047278
        (252 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044440 - symbol:HPT1 "homogentisate phytyltra...   616  3.9e-60   1
UNIPROTKB|B1B5P4 - symbol:SfN8DT-2 "Naringenin 8-dimethyl...   537  9.2e-52   1
UNIPROTKB|B1B3P3 - symbol:N8DT-1 "Naringenin 8-dimethylal...   534  1.9e-51   1
TAIR|locus:4010713740 - symbol:HST "homogentisate prenylt...   266  4.8e-23   1
TAIR|locus:2074393 - symbol:G4 species:3702 "Arabidopsis ...   136  9.7e-07   1


>TAIR|locus:2044440 [details] [associations]
            symbol:HPT1 "homogentisate phytyltransferase 1"
            species:3702 "Arabidopsis thaliana" [GO:0004659 "prenyltransferase
            activity" evidence=IEA;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0010189 "vitamin E biosynthetic process"
            evidence=IMP;TAS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISS] [GO:0010176 "homogentisate
            phytyltransferase activity" evidence=IMP;IDA] [GO:0042362
            "fat-soluble vitamin biosynthetic process" evidence=TAS]
            [GO:0009266 "response to temperature stimulus" evidence=IMP]
            [GO:0009915 "phloem sucrose loading" evidence=IMP] [GO:0031347
            "regulation of defense response" evidence=IMP] [GO:0006636
            "unsaturated fatty acid biosynthetic process" evidence=RCA;IMP]
            [GO:0071555 "cell wall organization" evidence=IMP] [GO:0000096
            "sulfur amino acid metabolic process" evidence=RCA] [GO:0006546
            "glycine catabolic process" evidence=RCA] [GO:0006733
            "oxidoreduction coenzyme metabolic process" evidence=RCA]
            [GO:0006766 "vitamin metabolic process" evidence=RCA] [GO:0008652
            "cellular amino acid biosynthetic process" evidence=RCA]
            [GO:0009072 "aromatic amino acid family metabolic process"
            evidence=RCA] [GO:0009106 "lipoate metabolic process" evidence=RCA]
            [GO:0009108 "coenzyme biosynthetic process" evidence=RCA]
            [GO:0009117 "nucleotide metabolic process" evidence=RCA]
            [GO:0009416 "response to light stimulus" evidence=RCA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
            "leaf morphogenesis" evidence=RCA] [GO:0015994 "chlorophyll
            metabolic process" evidence=RCA] [GO:0019216 "regulation of lipid
            metabolic process" evidence=RCA] [GO:0019288 "isopentenyl
            diphosphate biosynthetic process, mevalonate-independent pathway"
            evidence=RCA] [GO:0019748 "secondary metabolic process"
            evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
            [GO:0031408 "oxylipin biosynthetic process" evidence=RCA]
            [GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR000537 Pfam:PF01040 UniPathway:UPA00160
            GO:GO:0016021 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006636 EMBL:AC003673 GO:GO:0071555 GO:GO:0009535
            GO:GO:0009266 GO:GO:0009915 GO:GO:0031347 eggNOG:COG0382
            GO:GO:0010189 EMBL:AF324344 EMBL:AY089963 EMBL:GU198365
            EMBL:AY063893 EMBL:AY113993 IPI:IPI00546170 PIR:T01623
            RefSeq:NP_849984.1 UniGene:At.27152 STRING:Q8VWJ1 PRIDE:Q8VWJ1
            GeneID:816412 KEGG:ath:AT2G18950 TAIR:At2g18950
            HOGENOM:HOG000264578 InParanoid:Q8VWJ1 KO:K09833 OMA:YQFIWKL
            PhylomeDB:Q8VWJ1 ProtClustDB:PLN02878 Genevestigator:Q8VWJ1
            GO:GO:0010176 Uniprot:Q8VWJ1
        Length = 393

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 120/241 (49%), Positives = 164/241 (68%)

Query:     1 QALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV 60
             +A+V A++MNIY+V LNQL DVEIDKVNKP LPLASG++S  TGIAI    S+ S  +G 
Sbjct:   140 EAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSIMSFWLGW 199

Query:    61 MFRSPPXXXXXXXXXXXGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKY 120
             +  S P           G+AYSI LP LRWK    +A   ++ +  ++ Q+ F++HIQ +
Sbjct:   200 IVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYLHIQTH 259

Query:   121 MLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV 180
             +  RP++ T+PL+FATAFM   S    L KD+PD++GD+ F I++ SV +G++RVFW CV
Sbjct:   260 VFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRVFWTCV 319

Query:   181 SMMLTAYGAAILVGASSSFPLSKLVTVICHSILAFILWLRAKTVDLSSNASTLSFYMFIW 240
             +++  AY  AILVGA+S F  SK+++V+ H ILA  LW RAK+VDLSS     S YMFIW
Sbjct:   320 TLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEITSCYMFIW 379

Query:   241 K 241
             K
Sbjct:   380 K 380


>UNIPROTKB|B1B5P4 [details] [associations]
            symbol:SfN8DT-2 "Naringenin 8-dimethylallyltransferase"
            species:49840 "Sophora flavescens" [GO:0004659 "prenyltransferase
            activity" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR000537 Pfam:PF01040 GO:GO:0016021 GO:GO:0009507
            GO:GO:0004659 EMBL:AB370330 BioCyc:MetaCyc:MONOMER-16838
            Uniprot:B1B5P4
        Length = 407

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 106/241 (43%), Positives = 150/241 (62%)

Query:     1 QALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV 60
             Q +V  + ++I+ V LNQL D+EIDK+NKPDLPLASG+ S    + I   S +  L    
Sbjct:   154 QVVVAVICIHIFDVGLNQLCDIEIDKINKPDLPLASGNLSFRNVVIITASSLILGLGFAW 213

Query:    61 MFRSPPXXXXXXXXXXXGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKY 120
             +  S P            +AY++ LP LRWK +P L   S +  + +   L FF+H+Q  
Sbjct:   214 IVGSWPLFWTVFICCMFAAAYNVDLPLLRWKKYPVLTAISFIANVAVTRSLGFFLHMQTC 273

Query:   121 MLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV 180
             +  RP    +PL+F TA + + +    L KD+PD++GD KF IQ+LS+ +G +RVFW+CV
Sbjct:   274 VFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICV 333

Query:   181 SMMLTAYGAAILVGASSSFPLSKLVTVICHSILAFILWLRAKTVDLSSNASTLSFYMFIW 240
             S++  AYG  ILVGA+S    SK++TV+ H+ILA +LW  AK+ DL+SN    SFYMFIW
Sbjct:   334 SLLEMAYGVTILVGATSPILWSKIITVLGHAILASVLWYHAKSTDLTSNVVLQSFYMFIW 393

Query:   241 K 241
             K
Sbjct:   394 K 394


>UNIPROTKB|B1B3P3 [details] [associations]
            symbol:N8DT-1 "Naringenin 8-dimethylallyltransferase 1,
            chloroplastic" species:49840 "Sophora flavescens" [GO:0004659
            "prenyltransferase activity" evidence=IDA] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 GO:GO:0009507 GO:GO:0031969 GO:GO:0004659
            EMBL:AB325579 BioCyc:MetaCyc:MONOMER-16837 Uniprot:B1B3P3
        Length = 410

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 105/241 (43%), Positives = 149/241 (61%)

Query:     1 QALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV 60
             Q +V  + ++I+ V LNQL D+EIDK+NKPDLPLASG  S    + I   S +  L    
Sbjct:   157 QVVVAVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAW 216

Query:    61 MFRSPPXXXXXXXXXXXGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKY 120
             +  S P            SAY++ LP LRWK +P L   + +  + +   L FF+H+Q  
Sbjct:   217 IVDSWPLFWTVFISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTC 276

Query:   121 MLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV 180
             +  RP    +PL+F TA + + +    L KD+PD++GD KF IQ+LS+ +G +RVFW+CV
Sbjct:   277 VFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICV 336

Query:   181 SMMLTAYGAAILVGASSSFPLSKLVTVICHSILAFILWLRAKTVDLSSNASTLSFYMFIW 240
             S++   YG  ILVGA+S    SK++TV+ H++LA +LW  AK+VDL+SN    SFYMFIW
Sbjct:   337 SLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLWYHAKSVDLTSNVVLHSFYMFIW 396

Query:   241 K 241
             K
Sbjct:   397 K 397


>TAIR|locus:4010713740 [details] [associations]
            symbol:HST "homogentisate prenyltransferase"
            species:3702 "Arabidopsis thaliana" [GO:0004161
            "dimethylallyltranstransferase activity" evidence=NAS] [GO:0004659
            "prenyltransferase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0010236 "plastoquinone biosynthetic process"
            evidence=IMP] [GO:0010355 "homogentisate farnesyltransferase
            activity" evidence=IDA] [GO:0010356 "homogentisate
            geranylgeranyltransferase activity" evidence=IDA] [GO:0010357
            "homogentisate solanesyltransferase activity" evidence=IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] [GO:0016117 "carotenoid biosynthetic
            process" evidence=IMP] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 EMBL:CP002686 GO:GO:0009941 GO:GO:0016117
            GO:GO:0010236 IPI:IPI00938788 RefSeq:NP_001154609.1
            UniGene:At.71046 PRIDE:F4J8K0 EnsemblPlants:AT3G11945.2
            GeneID:5007993 KEGG:ath:AT3G11945 KO:K12501 OMA:TIYSVPP
            GO:GO:0010355 GO:GO:0010356 GO:GO:0010357 Uniprot:F4J8K0
        Length = 393

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 75/243 (30%), Positives = 120/243 (49%)

Query:     3 LVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSL-TMGVM 61
             L+  +  N Y+V +NQ+YD+ IDKVNKP LP+A+GD S  +   + +  ++  L  +G  
Sbjct:   144 LLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGLLVVGFN 203

Query:    62 FRSPPXXXXXXXXXXXGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYM 121
             F  P            G+ YS+  P LR K  P  A   +  + G +     + H  +  
Sbjct:   204 F-GPFITSLYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY-HATRAA 259

Query:   122 LARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVS 181
             L  P   + P+ F T+F+ + +    + KD+PDV+GDRKF I TL+  +G   + +L   
Sbjct:   260 LGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSG 319

Query:   182 MMLTAYGAAILVG--ASSSFPLSKLVT--VICHSILAFILWLRAKTVDLSSNASTLSFYM 237
             ++L  Y +AI +       F  S ++   VI  S L F  W+  K  + +  A +  +Y 
Sbjct:   320 LLLVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKA-NYTKEAIS-GYYR 377

Query:   238 FIW 240
             FIW
Sbjct:   378 FIW 380


>TAIR|locus:2074393 [details] [associations]
            symbol:G4 species:3702 "Arabidopsis thaliana" [GO:0004659
            "prenyltransferase activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0015995 "chlorophyll
            biosynthetic process" evidence=RCA;TAS] [GO:0046408 "chlorophyll
            synthetase activity" evidence=IDA] [GO:0009534 "chloroplast
            thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009073 "aromatic amino acid family biosynthetic process"
            evidence=RCA] [GO:0009902 "chloroplast relocation" evidence=RCA]
            [GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010027
            "thylakoid membrane organization" evidence=RCA] [GO:0016117
            "carotenoid biosynthetic process" evidence=RCA] [GO:0019288
            "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] [GO:0019344 "cysteine
            biosynthetic process" evidence=RCA] [GO:0030154 "cell
            differentiation" evidence=RCA] [GO:0034660 "ncRNA metabolic
            process" evidence=RCA] [GO:0042793 "transcription from plastid
            promoter" evidence=RCA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=RCA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=TAS] InterPro:IPR000537
            InterPro:IPR006372 InterPro:IPR011799 Pfam:PF01040 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0031969 EMBL:AF049236
            GO:GO:0009534 EMBL:U19382 EMBL:AY081481 EMBL:AY042821
            IPI:IPI00536017 PIR:S60222 RefSeq:NP_190750.1 UniGene:At.5423
            STRING:Q38833 PaxDb:Q38833 PRIDE:Q38833 EnsemblPlants:AT3G51820.1
            GeneID:824345 KEGG:ath:AT3G51820 TAIR:At3g51820 eggNOG:COG0382
            HOGENOM:HOG000149392 InParanoid:Q38833 KO:K04040 OMA:NDVKYQA
            PhylomeDB:Q38833 ProtClustDB:PLN00012 BioCyc:ARA:AT3G51820-MONOMER
            BioCyc:MetaCyc:AT3G51820-MONOMER Genevestigator:Q38833
            GO:GO:0046408 GO:GO:0030494 TIGRFAMs:TIGR02056 TIGRFAMs:TIGR01476
            Uniprot:Q38833
        Length = 387

 Score = 136 (52.9 bits), Expect = 9.7e-07, P = 9.7e-07
 Identities = 59/245 (24%), Positives = 104/245 (42%)

Query:    12 YVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTM-GVM-FRSPPXXX 69
             Y  T+N  YD +ID +N+P  P+ SG  S    I    +  L  L + G++   +     
Sbjct:   150 YTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTP 209

Query:    70 XXXXXXXXGS--AYSIQLPFLRWKGHPFLAPFSMMILMGLVY-QLLFFIHIQKYMLARPV 126
                     GS  +Y    P L+ K + ++  F++    G  Y  L ++     +    P 
Sbjct:   210 TVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFAL----GASYISLPWWAGQALFGTLTPD 265

Query:   127 VITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMM-LT 185
             V+   L+++ A + +      ++ D   V+GDR   +Q+L V  G E   W+CV  + +T
Sbjct:   266 VVVLTLLYSIAGLGI-----AIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAIDIT 320

Query:   186 AYGAA--ILVGASSSFPLSKLVTVICHSILAFILWLRAKT-VDLSSNASTLSFYMF-IWK 241
                 A  +L      + L+ +  +I   +  F  +L+     D+   AS   F +  I+ 
Sbjct:   321 QLSVAGYLLASGKPYYALALVALIIPQIVFQFKYFLKDPVKYDVKYQASAQPFLVLGIFV 380

Query:   242 TQLVS 246
             T L S
Sbjct:   381 TALAS 385


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.140   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      252       241   0.00094  113 3  11 22  0.45    32
                                                     32  0.44    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  588 (63 KB)
  Total size of DFA:  171 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.65u 0.10s 18.75t   Elapsed:  00:00:01
  Total cpu time:  18.66u 0.10s 18.76t   Elapsed:  00:00:01
  Start:  Sat May 11 01:43:32 2013   End:  Sat May 11 01:43:33 2013

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