BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047278
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 172/241 (71%)
Query: 1 QALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV 60
+A+V A+ MNIY+V LNQL+D+EIDKVNKP LPLASG++S TG+A+ + S +G
Sbjct: 151 EAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPATGVALVSAFAAMSFGLGW 210
Query: 61 MFRSPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKY 120
S PL LAL I F+LG+AYSI LPFLRWK +A ++ + ++ QL FF+HIQ +
Sbjct: 211 AVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQLAFFLHIQTF 270
Query: 121 MLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV 180
+ RP V T+PL+FATAFM S L KD+PD++GDR F I++ SV +G+++VFW+CV
Sbjct: 271 VFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLGQKKVFWICV 330
Query: 181 SMMLTAYGAAILVGASSSFPLSKLVTVICHSILAFILWLRAKTVDLSSNASTLSFYMFIW 240
++ AY AIL+GA+S+ SK TV+ H+ILA ILW R++++DL+S + SFYMFIW
Sbjct: 331 GLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSRSIDLTSKTAITSFYMFIW 390
Query: 241 K 241
K
Sbjct: 391 K 391
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 253 bits (647), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 125/241 (51%), Positives = 171/241 (70%)
Query: 1 QALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV 60
+A+V A++MNIY+V LNQL DVEIDKVNKP LPLASG++S TGIAI S+ S +G
Sbjct: 140 EAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSIMSFWLGW 199
Query: 61 MFRSPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKY 120
+ S PL AL + F+LG+AYSI LP LRWK +A ++ + ++ Q+ F++HIQ +
Sbjct: 200 IVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYLHIQTH 259
Query: 121 MLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV 180
+ RP++ T+PL+FATAFM S L KD+PD++GD+ F I++ SV +G++RVFW CV
Sbjct: 260 VFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRVFWTCV 319
Query: 181 SMMLTAYGAAILVGASSSFPLSKLVTVICHSILAFILWLRAKTVDLSSNASTLSFYMFIW 240
+++ AY AILVGA+S F SK+++V+ H ILA LW RAK+VDLSS S YMFIW
Sbjct: 320 TLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEITSCYMFIW 379
Query: 241 K 241
K
Sbjct: 380 K 380
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 154/241 (63%)
Query: 1 QALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV 60
Q +V + ++I+ V LNQL D+EIDK+NKPDLPLASG S + I S + L
Sbjct: 157 QVVVAVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAW 216
Query: 61 MFRSPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKY 120
+ S PL + I ++ SAY++ LP LRWK +P L + + + + L FF+H+Q
Sbjct: 217 IVDSWPLFWTVFISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTC 276
Query: 121 MLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV 180
+ RP +PL+F TA + + + L KD+PD++GD KF IQ+LS+ +G +RVFW+CV
Sbjct: 277 VFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICV 336
Query: 181 SMMLTAYGAAILVGASSSFPLSKLVTVICHSILAFILWLRAKTVDLSSNASTLSFYMFIW 240
S++ YG ILVGA+S SK++TV+ H++LA +LW AK+VDL+SN SFYMFIW
Sbjct: 337 SLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLWYHAKSVDLTSNVVLHSFYMFIW 396
Query: 241 K 241
K
Sbjct: 397 K 397
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 156/243 (64%), Gaps = 4/243 (1%)
Query: 1 QALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV 60
Q ++P + + IY+ +NQLYD+EIDK+NKP LP+ASG FS TG+ I+ ++ +L+ G
Sbjct: 156 QGVLPQLFIEIYLCGVNQLYDLEIDKINKPHLPMASGQFSFKTGVIIS--AAFLALSFGF 213
Query: 61 MF--RSPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQ 118
+ S PL+ L++ +AYSI +P LRWK +PF+A M+ L + +F H+Q
Sbjct: 214 TWITGSWPLICNLVVIASSWTAYSIDVPLLRWKRYPFVAAMCMISTWALALPISYFHHMQ 273
Query: 119 KYMLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWL 178
+L RP+ + L F AFM S L KD+PDV+GD++ I + +V +G++R FW+
Sbjct: 274 TVVLKRPIGFPRSLGFLVAFMTFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKRAFWI 333
Query: 179 CVSMMLTAYGAAILVGASSSFPLSKLVTVICHSILAFILWLRAKTVDLSSNASTLSFYMF 238
CVS A+G IL GAS S +K+ T + +++LA ILW +AK+VDLS AST SFYMF
Sbjct: 334 CVSFFEMAFGVGILAGASCSHFWTKIFTGMGNAVLASILWYQAKSVDLSDKASTGSFYMF 393
Query: 239 IWK 241
IWK
Sbjct: 394 IWK 396
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 11/237 (4%)
Query: 10 NIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLL 69
N Y+V +NQ+YD+ IDKVNKP LP+A+GD S + + + ++ L + V F P +
Sbjct: 144 NGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGLLV-VGFNFGPFIT 202
Query: 70 ALI-IWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVI 128
+L + LG+ YS+ P LR K P A + + G + + H + L P
Sbjct: 203 SLYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY-HATRAALGLPFQW 259
Query: 129 TKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMMLTAYG 188
+ P+ F T+F+ + + + KD+PDV+GDRKF I TL+ +G + +L ++L Y
Sbjct: 260 SAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYV 319
Query: 189 AAILVGASSSFPLSKLVTVICHSILA----FILWLRAKTVDLSSNASTLSFYMFIWK 241
+AI + + + H ILA F W+ K + + A + +Y FIW
Sbjct: 320 SAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKA-NYTKEAIS-GYYRFIWN 374
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 9/244 (3%)
Query: 2 ALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVM 61
LV + N Y+V +NQ+YD+ IDKVNKP LP+A+GD S T + ++ + ++ V
Sbjct: 129 GLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWLLVVLFAAAGFSIVVT 188
Query: 62 FRSPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYM 121
P + + LG+ YS+ P R K +P A + + G + + + +
Sbjct: 189 NFGPFITSLYCLGLFLGTIYSV--PPFRLKRYPVAAFLIIATVRGFLLNFGVY-YATRAA 245
Query: 122 LARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVS 181
L + P+ F T F+ + + + KD+PDV+GDRK+ I TL+ +G + +L
Sbjct: 246 LGLTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAFLGSG 305
Query: 182 MMLTAYGAAILVGASSSFPLSKLVTVICHSILA----FILWLRAKTVDLSSNASTLSFYM 237
+++ Y AAI V + V V H+ LA F W+ + S +Y
Sbjct: 306 LLIANYVAAIAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTKDAIS--QYYR 363
Query: 238 FIWK 241
FIW
Sbjct: 364 FIWN 367
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 38/176 (21%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGT-----------GIAIALISSLTSLTMGVMFR 63
T+N +D EID++N+P+ PL G R T G+A+AL+ SL +
Sbjct: 55 TINDYFDYEIDRINRPERPLPRGAMDRRTALWYSLFLFAVGLALALLISLKAFAFA---- 110
Query: 64 SPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLA 123
LLA I FL Y+ +L K PF+ ++ L G V L I + K LA
Sbjct: 111 ----LLAYITMFL----YAWKL-----KPLPFIGNIAVAALTG-VTPLYGAIAVGKIGLA 156
Query: 124 RPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLC 179
+ + LV + A ++KD+ DV+GD K +TL +I+GR + ++
Sbjct: 157 GTLAVCAFLV---------NVAREIVKDIEDVEGDLKKGAKTLPIILGRRKAAYVA 203
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFR-SPPLLLALII 73
T+N YD EID++N P+ P+ SG + +LI L S+ +G + +++ L
Sbjct: 50 TINDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFIISLENGIVVILCT 109
Query: 74 WFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLV 133
++ AY + K F+ + IL GL + + ++ + V + L
Sbjct: 110 ILMIIYAYDL-------KQRCFIGNLCVAILTGLTF-------VFGGLITKDVNLGFILG 155
Query: 134 FATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV 180
F F +++ + ++KD+ D++GD+K D TL +I G ++ L V
Sbjct: 156 F---FAFLMTLSREIIKDIEDIEGDKKEDAHTLPIIYGTKKAVMLAV 199
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
T+N +DVEID+VN+P+ P+ G R + AL+ + L + LL AL
Sbjct: 55 TINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFAL--- 111
Query: 75 FLLGSAYSIQLPFL-RWKGHPFLAPFSMMILMGL--VYQLLFFIHIQKYMLARPVVITKP 131
AY++ + + K PF+ ++ +L +Y L + + LA + I
Sbjct: 112 ----GAYALTFIYAWKLKPLPFIGNVAVALLTAATPIYGAL---GVGRVGLAGYLAICAF 164
Query: 132 LVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRER 174
LV + + ++KD+ D++GD K +TL +I+G+ R
Sbjct: 165 LV---------NVSREIMKDIEDIEGDMKMGAKTLPIIIGKRR 198
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALI-IW 74
LN +D+EIDKVN+PD P+ SG S + A G++F + IW
Sbjct: 54 LNDYFDLEIDKVNRPDRPIPSGKVSPKGAVVWA----------GILFAAGVAAACFTNIW 103
Query: 75 FLLGSAYSIQLPFL---RWKGHPFLAPFSMMILMGLVYQL-LFFIHIQKYMLARPVVITK 130
L + ++ L + ++KG PFL S+ L G ++ F + + +++ P
Sbjct: 104 CLAIALVNVVLLIIYAAKFKGIPFLGNLSVAYLSGSIFLFGGFLVGPESFLVMLP----- 158
Query: 131 PLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMMLTA 186
+FA F L A LLKD D++GDR +TL + +G + L V +L A
Sbjct: 159 --LFAITFFGTL--ARELLKDAEDIEGDRLGGARTLPMQIGVRKTSVLAVIFVLFA 210
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
T+N +D EIDK+N+P+ PL G R + +++ L + M I
Sbjct: 55 TINDYFDYEIDKINRPERPLPRGAMGRKVALYYSMLLFAVGLALAYMIN--------IYA 106
Query: 75 FLLGSAYSIQLPFLRWKGHPFLAPF-SMMILMGLVYQLLFF--IHIQKYMLARPVVITKP 131
F+LG + + WK P PF +++ GL + + ++ LA + I
Sbjct: 107 FILGVIAYVTMFIYAWKLKPL--PFVGNIVVAGLTGATPLYGAVAVEHLGLAGYLAICAF 164
Query: 132 LVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSM-MLTAYGAA 190
LV + A ++KD+ DV+GD +TL +I G++R ++ V +LT +
Sbjct: 165 LV---------NVAREVIKDIEDVEGDMAKGAKTLPIIWGKKRAAYVGVLFALLTVIASF 215
Query: 191 ILVGASSSFPLSKLVTVICHSILAFILWLRAKTVDLSSNASTL 233
+ V AS +V V + A L LR + +++ + L
Sbjct: 216 LPVKASVGVGYYAMVPVDLLILYAAYLILRNQDREVAHKSQKL 258
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 25/164 (15%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIWF 75
+N YD EID +NKP P+ SG S+ + I + SL + + + I F
Sbjct: 55 INDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSLFGIALSIFLG--------FIEF 106
Query: 76 LLGSAYSIQ-LPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVF 134
L+ +A+S+ + RW + P + ++ +G+ + L+F LA + K ++F
Sbjct: 107 LIVTAFSLSWYAYARWLKRTGV-PGNALVSLGVAFTLIF------GSLAAGNLTNKVIIF 159
Query: 135 ATAFMCVLSFANGLLKD----VPDVDGDRKFDIQTLSVIVGRER 174
++ ++F + L+++ V D+ GDR ++T++V +G +R
Sbjct: 160 SS-----VAFTSNLIREFVKAVEDLPGDRAHGVRTIAVRIGVKR 198
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 42/191 (21%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGT-----------GIAIALISSLTSLTMGVMFRS 64
+N + DVEID++N+PD P+ +GD S GIAIA ++ T+L + + +
Sbjct: 54 INDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIATLT--TTLCLAIAIIN 111
Query: 65 PPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLF---FIHIQKYM 121
+L+ Y+++L K P L ++ L G V+ LF F I+
Sbjct: 112 SVILI----------VYAVRL-----KRTPVLGNVAVAYLAGSVF--LFGGAFAGIEG-- 152
Query: 122 LARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVS 181
L R + + AT A LLKD DVDGD +TL +IVG + +
Sbjct: 153 LVRNLSLAAITFLAT-------IARELLKDAEDVDGDAAGGARTLPMIVGVRKTGIFAFA 205
Query: 182 MMLTAYGAAIL 192
A A++L
Sbjct: 206 CACGAVAASLL 216
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIWF 75
LN +D+EIDKVNKP P+ SG S + + +L +T +T+ + L +I F
Sbjct: 62 LNDYFDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAFLVNP---LCGIIALF 118
Query: 76 LLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVFA 135
++ + L K PF S+ L G F + +A + + A
Sbjct: 119 ---NSMVLILYAQSLKRTPFFGNASVGYLTGST----FLFGGAVFGMAGLQALVVLFLLA 171
Query: 136 TAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMMLTA 186
T + + A ++KDV D+ GD+K +TL +++G ++ ++ + TA
Sbjct: 172 T----LATIAREIVKDVEDIVGDKKDGARTLPILIGAKKASYIAAAFGFTA 218
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 22/167 (13%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
T+N +D EIDK+N+P+ PL G SR AL S+ G++ L + IW
Sbjct: 55 TINDYFDYEIDKINRPERPLPRGAMSRKA----ALWYSVALFATGIV-----LAWFINIW 105
Query: 75 -FLLGSAYSIQLPFLRW--KGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKP 131
FLL + + W K PF+ + L G L I + + LA + +
Sbjct: 106 DFLLAIVAYVTMFIYAWKLKPMPFIGNVVVASLTG-ATPLYGAIAVGEIGLAGTLALCAF 164
Query: 132 LVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWL 178
LV + A ++KD+ D++GD +TL +++GR+R ++
Sbjct: 165 LV---------NVAREVIKDIEDIEGDMAKGAKTLPILIGRKRAAYV 202
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
T+N +DVEIDK+N+P+ P+ G +R ++ L + ++ L AL +
Sbjct: 55 TINDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAY 114
Query: 75 FLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVF 134
FL Y+ +L K PF+ ++ +L + + + + LA + I LV
Sbjct: 115 FLT-FVYAWKL-----KPLPFIGNVTVALLTAAT-PIYGAVGVGRIDLAGYLAICAFLV- 166
Query: 135 ATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRER 174
+ + ++KD+ D +GD++ +TL +++G+++
Sbjct: 167 --------NVSREIMKDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIWF 75
+N +D ID +N+PD P+ SG SR +A A L L + V F +P + ++
Sbjct: 54 INDYFDAAIDTINRPDRPIPSGAVSRNAALAWAFSLFLLGLAVSV-FTTPLCMGIALVNA 112
Query: 76 LLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVFA 135
LL Y+ +L K PF ++ L + F+ Y ++ P+ A
Sbjct: 113 LLLVLYAARL-----KSTPFFGNAAVAFLSASI-----FLFGGAYAGWHALLDMLPIA-A 161
Query: 136 TAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRER 174
F+ +L A LLKD D++GDR TL++ +G +
Sbjct: 162 ITFLAML--ARELLKDAEDIEGDRAHGADTLAIRIGVRK 198
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 73/200 (36%), Gaps = 60/200 (30%)
Query: 12 YVVTLNQLYDVEIDKVNKPDLPLASGDFSR-------------------------GTGIA 46
Y T+N YD +ID +N+P P+ SG S G
Sbjct: 139 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAGHDFP 198
Query: 47 IALISSLTSLTMGVMFRSPPLLLALIIW---FLLGSAYSIQLPFLRWKGHPFLAPFSMMI 103
I ++ + ++ +PPL L W F LG++Y I LP+ W G
Sbjct: 199 IIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASY-IGLPW--WAG----------- 244
Query: 104 LMGLVYQLLFFIHIQKYMLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDI 163
Q LF +T +V T+ + ++ D V+GDR +
Sbjct: 245 ------QALFG------------TLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGL 286
Query: 164 QTLSVIVGRERVFWLCVSMM 183
Q+L V G E W+CV +
Sbjct: 287 QSLPVAFGMETAKWICVGAI 306
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 95/259 (36%), Gaps = 64/259 (24%)
Query: 12 YVVTLNQLYDVEIDKVNKPDLPLASGDFSR-------------------------GTGIA 46
Y T+N YD +ID +N+P P+ SG S G
Sbjct: 141 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLDIWAGHDFP 200
Query: 47 IALISSLTSLTMGVMFRSPPLLLALIIW---FLLGSAYSIQLPFLRWKGHPFLAPFSMMI 103
I +L + ++ +PPL L W F LG++Y I LP+ W G
Sbjct: 201 IIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASY-IGLPW--WAG----------- 246
Query: 104 LMGLVYQLLFFIHIQKYMLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDI 163
Q LF +T +V T + ++ D ++GDR +
Sbjct: 247 ------QALFG------------TLTPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGL 288
Query: 164 QTLSVIVGRERVFWLCV---SMMLTAYGAAILVGASSSFPLSKLVTVICHSILAFILWLR 220
Q+L V G E W+CV + + A +L + L+ L I IL F +L+
Sbjct: 289 QSLPVAFGMETAKWICVGAIDITQLSVAAYLLSTGKLYYALALLGLTIPQVILQFQYFLK 348
Query: 221 AK-TVDLSSNASTLSFYMF 238
D+ AS F++F
Sbjct: 349 DPVKYDVKYQASAQPFFVF 367
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 30/167 (17%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
T N +D EIDK+N+P+ PL G SR + AL+ + + A I +
Sbjct: 55 TANDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRAFVFATIAY 114
Query: 75 FLLGSAYSIQLPFL-RWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPV--VITKP 131
FL FL WK P L+ I + A P+ I
Sbjct: 115 FLT---------FLYGWKLKPL--------------PLVGNITVAALTAATPIYGAIGVG 151
Query: 132 LVFATAFMCVLSF----ANGLLKDVPDVDGDRKFDIQTLSVIVGRER 174
+ ++ + +F + ++KD+ D++GD+ +TL +I+G ++
Sbjct: 152 RIGLAGYLAICAFLVNVSREIMKDIEDIEGDKALGARTLPIIIGEKK 198
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 17 NQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIWFL 76
N D +D VN+PD P+ SG G+ IAL+ ++ SL +G M P A + L
Sbjct: 71 NNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWML-GPWGFGATVFGVL 129
Query: 77 LGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQ-LLFFIHIQKYMLARP--VVITKPLV 133
AYS++ +R K + P L+ L Y+ L +F P ++T L+
Sbjct: 130 AAWAYSVEP--IRLKRSGWWGPG----LVALCYEGLPWFTGAAVLSAGAPSFFIVTVALL 183
Query: 134 FATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMMLTA 186
+A +++ L D ++GDR+ +++L V++G E L ++M A
Sbjct: 184 YAFGAHGIMT-----LNDFKALEGDRQHGVRSLPVMLGPEVAAKLACTVMAMA 231
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 10/207 (4%)
Query: 17 NQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIWFL 76
N D +D +N+P P+ SG G+ IA+ SL SL +G S + L+
Sbjct: 72 NDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVGWQLGSWGFVATLL---G 128
Query: 77 LGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITK-PLVFA 135
+ +A++ + +R K + P L+GL Y+ L +I +LA P+V
Sbjct: 129 VAAAWAYSVEPIRLKRSGWWGPG----LVGLAYEGLPWITGAAVLLATADTSPGFPIVMM 184
Query: 136 TAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMMLTAYGAAI--LV 193
+ + + D ++GDRK I++L + G E + ++M A I L
Sbjct: 185 ATLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVMGLAQALVITMLY 244
Query: 194 GASSSFPLSKLVTVICHSILAFILWLR 220
S + + ++ ++C A +W+R
Sbjct: 245 LFSKPYHATAVLVLLCGQFWAMSVWMR 271
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 73/200 (36%), Gaps = 60/200 (30%)
Query: 12 YVVTLNQLYDVEIDKVNKPDLPLASGDFSR-------------------------GTGIA 46
Y T+N YD +ID +N+P P+ SG S G
Sbjct: 150 YTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTP 209
Query: 47 IALISSLTSLTMGVMFRSPPLLLALIIW---FLLGSAYSIQLPFLRWKGHPFLAPFSMMI 103
+L + ++ +PPL L W F LG++Y I LP+ W G +
Sbjct: 210 TVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASY-ISLPW--WAGQALFGTLT--- 263
Query: 104 LMGLVYQLLFFIHIQKYMLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDI 163
P V+ L+++ A + + ++ D V+GDR +
Sbjct: 264 ---------------------PDVVVLTLLYSIAGLGI-----AIVNDFKSVEGDRALGL 297
Query: 164 QTLSVIVGRERVFWLCVSMM 183
Q+L V G E W+CV +
Sbjct: 298 QSLPVAFGTETAKWICVGAI 317
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 28/175 (16%)
Query: 16 LNQLYDVEIDKVNKPDLPLASG----DFSRGTGIAIALISSLTSLTMGVMFRSPPLLLAL 71
+N +YD+E+DK+NKP+ PL SG + +R I + + + S+ +G++ P AL
Sbjct: 55 INDVYDIEVDKINKPERPLPSGRIAVNIARRFSIVLFAVGLIISIPLGLI----PFGFAL 110
Query: 72 IIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYM--LARPVVIT 129
I LL Y+ L L G+ +A S + Y LA ++
Sbjct: 111 ITIVLL-YEYARSLKKLGLVGNFIVALTSAL---------------SAYYGGLASGSLLG 154
Query: 130 KPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMML 184
+ T ++ + + +K + D++GD++ + TL+V +G E+ W+ ++L
Sbjct: 155 N-FIIPTIYIFFFTLSREFVKGIEDIEGDKRNGVNTLAVKLG-EKSTWIIAKIIL 207
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 26/163 (15%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALII-- 73
+N +D EIDK+N+P+ PL G S+ +L G+ +L+A +I
Sbjct: 56 INDYFDYEIDKINRPNRPLPRGALSKN-----------IALVYGISLGGVAILIAYLINF 104
Query: 74 ---WFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITK 130
F LG+ + L + K PF+ + L G+ + I + K LA + +
Sbjct: 105 EAFIFALGAYLLMYLYARKLKPQPFIGNLVVATLTGIT-PIYGAIAVGKIGLAGYLALCA 163
Query: 131 PLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRE 173
LV + A + KD+ D++GD+ +TL ++ G E
Sbjct: 164 FLV---------NVAREIFKDIEDIEGDKAQGAKTLPIVWGIE 197
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
+N +D E+D VN+PD P+ SG S + AL + M + L +A +
Sbjct: 51 AINDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMATVINRMCLAIAALNS 110
Query: 75 FLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVF 134
LL L R KG P + + L+G + LF + + RP P V+
Sbjct: 111 VLL------YLYSWRLKGTPLIGNVMVSYLVGSCF--LFGAAVGQ----RP----APAVW 154
Query: 135 ATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGR 172
+ + +LKD+ DV+GD ++TL + G
Sbjct: 155 LFLLAFLANLVREILKDLEDVEGDAALGLKTLPIAYGE 192
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
+N +D EID VN+PD P+ SG S + ++ + + + L LAL+
Sbjct: 52 AINDYFDREIDAVNRPDRPIPSGRISPRAALIWSVALFIAGCLIAGLINQSCLALALLNS 111
Query: 75 FLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVF 134
F+L + R KG P ++ L G + LF + A P I
Sbjct: 112 FVL------IIYAARLKGLPVAGNIAISYLTGTTF--LF-----GGLAASPSSI------ 152
Query: 135 ATAFMCVLS----FANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMMLTA 186
TAF+ +LS + ++KD+ D+ GD +TL +G+ + F L +++ A
Sbjct: 153 -TAFLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIGKRKSFVLASLVLIVA 207
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 2 ALVPAVLMNIYVVTLNQLYDVEIDKVNKPDLPLASGDFS-RGTGIAIALISSLTSLTMGV 60
A+V VL +N +D +ID +N+PD P+ G S RG AL+ S+
Sbjct: 42 AVVATVLATGAGNAINDYFDRDIDAINEPDRPIPRGAVSPRG-----ALVYSVA------ 90
Query: 61 MFRSPPLLLALIIWFLLGSAYSIQLPFLR-----WKGHPFLAPFSMMILMGLVYQLLFFI 115
+F +L L+ W + A +I L L +KG P + + L G + L+
Sbjct: 91 LFAVAVVLTLLLPWLAIAIA-AINLVALVAYTEVFKGLPGVGNALVAYLTGSTF--LYGG 147
Query: 116 HIQKYMLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERV 175
LA VV+ FA A C + A ++KDV D+DGDR ++TL +++G R
Sbjct: 148 AAVGGDLAAVVVL-----FALA-ACA-TMAREIVKDVEDIDGDRAEGLRTLPIVIGERRS 200
Query: 176 FW 177
+
Sbjct: 201 LY 202
>sp|Q8TS44|DGGGP_METAC Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0961 PE=3 SV=1
Length = 289
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 58/194 (29%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGD-------------FSRGTGIA---------IALISS 52
+N +D++ID +N+P+ P+ SG F+ GT +A IAL +S
Sbjct: 69 AINDYFDIKIDSINRPERPIPSGRVQAKEALYFSYLLFAAGTLLAFSINSICGLIALFNS 128
Query: 53 LTSLTMGVMFRSPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLL 112
L + + PLL L I +L GS FL S+ L GL +
Sbjct: 129 LLLILYAKTLKGTPLLGNLSIGYLTGSV--------------FLFGASVFGLEGLKTLFV 174
Query: 113 FFIHIQKYMLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGR 172
F+ + AR +V KD+ D++GDR D TL + +G
Sbjct: 175 LFLLAALAITAREIV----------------------KDIEDMEGDRLEDADTLPLRIGA 212
Query: 173 ERVFWLCVSMMLTA 186
++ +L V + L A
Sbjct: 213 KKAGYLAVLIGLLA 226
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 36/181 (19%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRG-TGIAIALISSLTSLTM-------GVMFRSPPL 67
+N +D EID +N+P+ P+ SG SRG G+ ++ +L SL G++ S L
Sbjct: 51 INDYFDHEIDAINRPERPIPSGRISRGVAGVYSIILFALASLMGFYLGLLPGLVVVSSSL 110
Query: 68 LLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGL--VYQLLFFIHIQKYMLARP 125
L+ W R K + ++ L GL V+ + ++ +L
Sbjct: 111 LMVYYAW--------------RLKKRCLVGNITISFLTGLSFVFGGIVLGEVRASIL--- 153
Query: 126 VVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMMLT 185
L F + +++ A ++KD+ DV+GDR TL + G L S ML
Sbjct: 154 ------LGF---YAFLMTMAREIVKDMEDVEGDRAEGATTLPITHGMRISGVLAASFMLI 204
Query: 186 A 186
A
Sbjct: 205 A 205
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIWF 75
+N ++D+EIDK+NKP+ PL SG +++++ L + + V+ ++AL+
Sbjct: 56 INDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLTVL 115
Query: 76 LLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVFA 135
L Y+ L G+ +A S L L FF + + R ++
Sbjct: 116 AL-YYYAKDLKKQGLVGNLIVALTSA--LSAFYGGLAFF---EGSWVIRTLI-------P 162
Query: 136 TAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLC 179
T ++ + +K + DV GD ++TL+V VG E+ +++
Sbjct: 163 TLYIFFFTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKTWFIS 206
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIWF 75
+N YD EID +N+PD P+ SG G + A++ L + ++F PL LA I
Sbjct: 54 INDYYDKEIDAINQPDRPIPSGQIIPGHALMYAILLFLIGNGIAILFT--PLPLAGI--- 108
Query: 76 LLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVFA 135
+G++ + L K P + S+ L ++ LF IQ + ++ P+ A
Sbjct: 109 AMGNSVILWLYASFLKKTPLIGNISVSYLAASIF--LFGGAIQG---TQGIISVFPIAGA 163
Query: 136 TAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV 180
T + A L+KD D+ GD + +T ++ G +L +
Sbjct: 164 T---WGVMLARELIKDAEDMPGDNEHGARTFPLLYGIRATIYLAL 205
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIWF 75
+N +YDVEIDK+NKP P+ SG S A+++ + + + ++ L++AL+
Sbjct: 56 INDVYDVEIDKINKPYRPIPSGKISVNKAKALSIALFIIGIALSILLNIYALVIALVTAI 115
Query: 76 LLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVFA 135
L Y+ L + G+ +A + + + Y L F ++L ++
Sbjct: 116 GL-IYYAKDLKKTGFYGNLLVATTTA---LSIFYGGLAFFS-DNWLLR--------IIIP 162
Query: 136 TAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRER 174
T + L+ ++K + D +GD +++TL+ +G +
Sbjct: 163 TLYAFFLTLIREIVKGIEDYNGDSLNNVKTLATTLGINK 201
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 73/187 (39%), Gaps = 58/187 (31%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGD-------------FSRGTGIA---------IALISS 52
+N +DV ID +N+PD P+ SG F+ GT +A IAL +S
Sbjct: 69 AINDYFDVRIDSINRPDRPIPSGRMKLKEALYFSYTLFALGTLLAFSINPICGVIALFNS 128
Query: 53 LTSLTMGVMFRSPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLL 112
L + + PLL L I +L GS+ FL S+ L GL +
Sbjct: 129 LVLIFYAKTLKGTPLLGNLSIGYLTGSS--------------FLFGASVFGLEGLKALFV 174
Query: 113 FFIHIQKYMLARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGR 172
F+ + AR +V KD+ D++GD+ TL + VG
Sbjct: 175 LFLLAALAITAREIV----------------------KDIEDMEGDKMEGADTLPLRVGA 212
Query: 173 ERVFWLC 179
++ +L
Sbjct: 213 KKASYLA 219
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 9/46 (19%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVM 61
+N +YDVEID++NKPD P+ SG S + + TSL+ G+M
Sbjct: 54 INDVYDVEIDRINKPDRPIPSGAVS---------LRTATSLSYGLM 90
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIA------IALISSLTSLTMGVMFRSPPLLL 69
+N +D IDK+N+P P+ G S I +A + S + L + + + LL
Sbjct: 62 INDYFDRAIDKINRPMRPIPRGAISERGAIVFSGFLFVAAVVSTSVLPLIAIVLALMNLL 121
Query: 70 ALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVIT 129
AL+ + L +KG P + + L G + LF + R IT
Sbjct: 122 ALVAYTEL------------FKGLPGVGNAIVAYLTGSTF--LF----GAAAIGR---IT 160
Query: 130 KPLVFATAFMCVLSFAN-GLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCVSMMLTAYG 188
V + L+ A ++KD+ D+DGDRK +QTL +++G + + ++L A
Sbjct: 161 DFGVVVLFILAALATATREIIKDIEDLDGDRKEGLQTLPIVIGVTPAYRVATGVLLVAVI 220
Query: 189 AAIL 192
A+I+
Sbjct: 221 ASIV 224
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 22/165 (13%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
+N +D E+D++N PD + G S +A +++ + + + P+L I
Sbjct: 56 AINDYFDREVDRINDPDRAIPRGAVSPRGALAYSVVLFVGAAALAATL---PVLAVCIAA 112
Query: 75 FLLGS--AYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPL 132
L Y+ L KG P G L+ ++ ++ V +
Sbjct: 113 LNLAGLLTYTQYL-----KGRP-----------GAGNALVAYLGGSTFVFGAAAVGSPLA 156
Query: 133 VFATAFMCVLS-FANGLLKDVPDVDGDRKFDIQTLSVIVGRERVF 176
A + LS FA ++KDV D+ GDR ++TL V+VG +R
Sbjct: 157 GGVLAALAALSTFAREVIKDVEDLAGDRAAGLRTLPVVVGHQRAL 201
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 22/165 (13%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
+N +D E+D++N PD + G S +A +++ + + + P+L I
Sbjct: 56 AINDYFDREVDRINDPDRAIPRGAVSPRGALAYSVVLFVGAAALAATL---PVLAVCIAA 112
Query: 75 FLLGS--AYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPL 132
L Y+ L KG P G L+ ++ ++ V +
Sbjct: 113 LNLAGLLTYTQYL-----KGRP-----------GAGNALVAYLGGSTFVFGAAAVGSPLA 156
Query: 133 VFATAFMCVLS-FANGLLKDVPDVDGDRKFDIQTLSVIVGRERVF 176
A + LS FA ++KDV D+ GDR ++TL V+VG +R
Sbjct: 157 GGVLAALAALSTFAREVIKDVEDLAGDRAAGLRTLPVVVGHQRAL 201
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
LN + D+EIDK+NKP+ PL S S + + + ++ + + +F +ALI
Sbjct: 58 ALNDIQDIEIDKINKPNRPLPSNKISLKSATIFSYLLMISGIIIS-LFNMICFAIALI-- 114
Query: 75 FLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVF 134
++ + L ++K + + + L G ++ I V IT L
Sbjct: 115 ----NSIVLYLYAKKYKRNKIIGNLIVAYLTGSIF-------IFGGASVGNVEITLIL-- 161
Query: 135 ATAFMCVL--SFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVF 176
F+C L +++ ++KD D+DGD+ + +L + G+ +F
Sbjct: 162 ---FLCALFATWSREIIKDYEDLDGDKSEGVISLPIKYGKNSIF 202
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 40/179 (22%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGD-------------FSRGTGIAIALISSLTSLTMGVM 61
+N +D++ID +N+P+ P+ SG F+ GT IA ++ S S+ +
Sbjct: 69 AINDYFDIKIDSINRPERPIPSGRVKAKEAFYFSYLLFALGTLIAFSINSICGSIAL--- 125
Query: 62 FRSPPLLLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYM 121
F S L+L Y+ L KG P L S+ L G V+ LF I +
Sbjct: 126 FNSLLLIL-----------YAKTL-----KGTPLLGNLSIGYLTGSVF--LFGASIFGFG 167
Query: 122 LARPVVITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFWLCV 180
+ + + +F A + + A ++KD+ D++GD TL + +G ++ +L V
Sbjct: 168 GIKALSV----LFLLAALAIT--AREIVKDIEDMEGDSLEGADTLPLRIGAKKAGYLAV 220
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 27/167 (16%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV---MFRSPPLLLAL 71
LN +YD++IDK+NKP P+ S S G A I S + MG+ MF L+A+
Sbjct: 56 ALNDIYDLKIDKINKPKRPIPSKRISLGE----ARIFSYLLVVMGLIISMFNITCFLMAV 111
Query: 72 IIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKP 131
+ +L S +K + + + L G V+ + + +
Sbjct: 112 LNSIVLQQYAS------TYKKNKIVGNLIVAYLTGSVF------------IFGGIAVGNI 153
Query: 132 LVFATAFMCVL--SFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVF 176
V F+C L ++ ++KD D++GD K + ++ + G + ++
Sbjct: 154 DVTIMLFLCALFAMWSREIIKDYEDIEGDIKEKVISIPIKCGEKSIY 200
>sp|A8A9J7|DGGGP_IGNH4 Digeranylgeranylglyceryl phosphate synthase OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=Igni_0416 PE=3 SV=2
Length = 303
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 21/161 (13%)
Query: 17 NQLYDVEIDKVNKPDLPLASG----DFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALI 72
N +DVEIDKVNKP+ P+ SG + +R +A+ + L L +G + + L A++
Sbjct: 58 NDYFDVEIDKVNKPERPIPSGRVGAEEARKLALALLALGPLLGLAVGPLTGAYAALNAVL 117
Query: 73 IWFLLGSAYSIQLPFLRWKGHPFLAPFSM--MILMGLVYQLLFFIHIQKYMLARPVVITK 130
+++ YS L G+ FS +L G + + + + + P+++
Sbjct: 118 MYY-----YSKSLKKTGLPGN-LAVSFSTASTLLYGSLATAEWAGEVARVLRTIPIIL-- 169
Query: 131 PLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVG 171
+VF +++ A ++K V D GD++ ++TL+V+ G
Sbjct: 170 -MVF------LMTLAREVVKGVEDYVGDKEGGVKTLAVVKG 203
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 37.4 bits (85), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 12 YVVTLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLAL 71
Y +N ++D+EID++NKP PL SG + I + L + + L++A+
Sbjct: 57 YGNVINDIFDIEIDRINKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIAV 116
Query: 72 IIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKP 131
I + + K P + F + L G V+ LF K ++ PVVI
Sbjct: 117 I-----NALFLYLYAKKYKKYKP-IGNFIIGYLTGSVF--LFGGVAGKNVM--PVVIL-- 164
Query: 132 LVFATAFMCVL--SFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVFW 177
F+C L + ++KD D++GD+K + +L + G++ +++
Sbjct: 165 ------FLCSLLSIWGREIVKDFEDMEGDKKEGVISLPIKYGKKSLYF 206
>sp|A5ULR8|DGGGP_METS3 Digeranylgeranylglyceryl phosphate synthase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0941
PE=3 SV=1
Length = 283
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTG--------IAIALISSLTSLTMGVMFRSPPL 67
+N +D +ID +NKP P+ SG S I A++ L S + +
Sbjct: 51 INDYFDYKIDLINKPQRPIPSGRISLDNAKNYAYLLFILAAIVGFLISCLVDTWIPCTIV 110
Query: 68 LLALIIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVV 127
+ + II +L Y+ +L K P + ++ + GL + Y ++
Sbjct: 111 IFSDIILYL----YAYKL-----KSTPLIGNLTVGFMTGLCFIF------AGYTFNEGLI 155
Query: 128 ITKPLVFATAFMCVLSFANGLLKDVPDVDGDRKFDIQTLSVIVG 171
I + + A F +++ A + KD+ D++GD +T ++ G
Sbjct: 156 IYESYLLAF-FALIMTTAREITKDIEDMEGDMAEGAKTFPILYG 198
>sp|Q6LWN2|DGGGP_METMP Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1677 PE=3 SV=1
Length = 278
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 27/167 (16%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGV---MFRSPPLLLAL 71
LN +YD++ID++NKP P+ S + A + S + + MG+ +F L+A+
Sbjct: 56 ALNDIYDLKIDRINKPKRPIPSKRITLNN----AKVFSYSLVVMGLFISLFNISCFLMAV 111
Query: 72 IIWFLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKP 131
+ +L S +K + + + L G V+ + + +
Sbjct: 112 LNSIVLQQYAS------TYKKNKIIGNLIVAYLTGSVF------------IFGGIAVGNI 153
Query: 132 LVFATAFMCVL--SFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVF 176
V F+C L ++ ++KD D++GD K + ++ + G ++
Sbjct: 154 DVTIMLFLCALFAMWSREIIKDYEDIEGDLKEKVISIPIKCGERSIY 200
>sp|A4G0P3|DGGGP_METM5 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1730
PE=3 SV=1
Length = 278
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
LN +YD++ID++NKP+ P+ S S + + T L + +F L+A++
Sbjct: 56 ALNDIYDLKIDRINKPERPIPSKRISLTNARIFSYLLVFTGLCIS-LFNITCFLMAVLNS 114
Query: 75 FLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVF 134
+L S +K + + + L G V+ + + + V
Sbjct: 115 IVLQQYAS------TYKKNKIIGNLIVAYLTGSVF------------IFGGIAVGNIDVT 156
Query: 135 ATAFMCVL--SFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVF 176
F+C L ++ ++KD D++GD + + ++ + G ++
Sbjct: 157 IMLFLCALFAMWSREIIKDYEDIEGDIQEKVISIPIKCGENSIY 200
>sp|A6VHU1|DGGGP_METM7 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0950
PE=3 SV=1
Length = 278
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALIIW 74
LN +YD++IDK+NKP+ P+ S S + + L + +F L+A++
Sbjct: 56 ALNDIYDLKIDKINKPERPIPSKRLSLTDARVFSYLLVFVGLFIS-LFNMACFLMAVLNS 114
Query: 75 FLLGSAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPVVITKPLVF 134
+L S +K + + + L G V+ + + + V
Sbjct: 115 IVLQQYAS------TYKKNKIIGNLIVAYLTGSVF------------IFGGIAVGNIDVT 156
Query: 135 ATAFMCVL--SFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVF 176
F+C L ++ ++KD D++GD + + ++ + G + V+
Sbjct: 157 IMLFLCALFAMWSREIIKDYEDIEGDIQEKVISIPIKCGEKSVY 200
>sp|A6UQV8|DGGGP_METVS Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_0977 PE=3 SV=1
Length = 278
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 37/172 (21%)
Query: 15 TLNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLALII- 73
+LN +YD++ID++NKP P+ S SLT +F ++ LII
Sbjct: 56 SLNDIYDLKIDRINKPFRPIP---------------SKRISLTDAKVFSYSIMIFGLIIS 100
Query: 74 -----WFLLG--SAYSIQLPFLRWKGHPFLAPFSMMILMGLVYQLLFFIHIQKYMLARPV 126
FL+ +A +Q +K + + + L G V+ + +
Sbjct: 101 LFNIYCFLMAVLNAVVLQKYAKIYKKNKIIGNMLVAYLTGSVF------------IFGGI 148
Query: 127 VITKPLVFATAFMCVL--SFANGLLKDVPDVDGDRKFDIQTLSVIVGRERVF 176
+ V F C + +A ++KD D++GD K + +L + G + ++
Sbjct: 149 AVGNVNVSLYLFSCAMFSMWAREIIKDYEDIEGDLKEKVSSLPIKYGEKSIY 200
>sp|A7GTT0|EZRA_BACCN Septation ring formation regulator EzrA OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=ezrA PE=3 SV=1
Length = 569
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 16 LNQLYDVEIDKVNKPDLPLASGDFSRGTGIAIALISSLTSLTMGVMFRSPPLLLA 70
+ +L DVE DK K + A+GD+ + I ++L L++L G++ P LL+
Sbjct: 172 IEELLDVESDKFQKFEEATANGDYLKARDIVMSLEEGLSNLE-GMIQEVPDLLVE 225
>sp|P39582|MENA_BACSU Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase
OS=Bacillus subtilis (strain 168) GN=menA PE=3 SV=1
Length = 311
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 94 PFLAPFSMMILMGLVYQLL-FFIHIQKYMLARPVVITKPLVFATAFMCVLSFANGLLKDV 152
PF FS I MG V+ L+ FFI K + + ++I+ P+ +L A L ++
Sbjct: 156 PFGELFSG-ICMGSVFVLISFFIQTDKINM-QSILISIPI-------AILVGAINLSNNI 206
Query: 153 PDVDGDRKFDIQTLSVIVGRERVFWLCVSMMLTAY 187
D++ D+K +TL++++G + L + AY
Sbjct: 207 RDIEEDKKGGRKTLAILMGHKGAVTLLAASFAVAY 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.142 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,852,054
Number of Sequences: 539616
Number of extensions: 3171472
Number of successful extensions: 9063
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 8971
Number of HSP's gapped (non-prelim): 77
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 60 (27.7 bits)