Your job contains 1 sequence.
>047282
MYLLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTF
GFSMETGVDFTIFSIYLWEFNSSLEMDDETTNPVSNPKRRRKNITALVVRLSLGGGKLGQ
GGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGIS
KSTRFKN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047282
(187 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P02870 - symbol:P02870 "Lectin" species:3864 "L... 115 1.7e-05 1
UNIPROTKB|P58907 - symbol:P58907 "Lectin alpha chain" spe... 110 6.8e-05 1
UNIPROTKB|P81637 - symbol:P81637 "Lectin alpha chain" spe... 110 6.8e-05 1
TAIR|locus:2143528 - symbol:AT5G03140 species:3702 "Arabi... 112 0.00023 1
TAIR|locus:2095390 - symbol:AT3G28230 "AT3G28230" species... 103 0.00024 1
UNIPROTKB|P83721 - symbol:P83721 "Mannose/glucose-specifi... 106 0.00026 1
UNIPROTKB|P81517 - symbol:P81517 "Lectin alpha chain" spe... 106 0.00026 1
UNIPROTKB|P58908 - symbol:P58908 "Lectin alpha chain" spe... 106 0.00026 1
TAIR|locus:2142499 - symbol:AT5G10530 species:3702 "Arabi... 109 0.00056 1
UNIPROTKB|B3EWJ2 - symbol:B3EWJ2 "Lectin alpha chain" spe... 102 0.00091 1
UNIPROTKB|P08902 - symbol:P08902 "Lectin alpha chain" spe... 102 0.00091 1
UNIPROTKB|P42088 - symbol:P42088 "Lectin" species:28956 "... 102 0.00094 1
>UNIPROTKB|P02870 [details] [associations]
symbol:P02870 "Lectin" species:3864 "Lens culinaris"
[GO:0005509 "calcium ion binding" evidence=IDA] [GO:0009756
"carbohydrate mediated signaling" evidence=TAS] [GO:0030145
"manganese ion binding" evidence=IDA] [GO:0030246 "carbohydrate
binding" evidence=IDA] InterPro:IPR001220 Pfam:PF00139
GO:GO:0030246 GO:GO:0005509 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030145 GO:GO:0005537
PROSITE:PS00307 GO:GO:0009756 InterPro:IPR016363 InterPro:IPR000985
InterPro:IPR019825 PIRSF:PIRSF002690 PROSITE:PS00308 EMBL:AY547295
EMBL:DQ005103 PIR:A48694 PDB:1LEM PDB:1LEN PDB:1LES PDB:2LAL
PDBsum:1LEM PDBsum:1LEN PDBsum:1LES PDBsum:2LAL
ProteinModelPortal:P02870 SMR:P02870 Allergome:8816
EvolutionaryTrace:P02870 Uniprot:P02870
Length = 275
Score = 115 (45.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 7 DVKSGRRNEAWISYNSSTHNLSVAFT---GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFS 63
++++G R I++N++T+ L+V T +V L+ V L+ +PE+V GFS
Sbjct: 183 NLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFS 242
Query: 64 METGVDFTIFSIYLWEFNSSL 84
TG +F ++ W F+S L
Sbjct: 243 ATTGAEFAAHEVHSWSFHSEL 263
>UNIPROTKB|P58907 [details] [associations]
symbol:P58907 "Lectin alpha chain" species:167618 "Dioclea
virgata" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0030246 "carbohydrate
binding" evidence=IDA] InterPro:IPR001220 Pfam:PF00139
GO:GO:0005773 GO:GO:0033095 GO:GO:0046872 GO:GO:0030246
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005537 PROSITE:PS00307 InterPro:IPR000985
InterPro:IPR019825 PROSITE:PS00308 PDB:3RRD PDB:3RS6 PDBsum:3RRD
PDBsum:3RS6 Uniprot:P58907
Length = 237
Score = 110 (43.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 5 RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
R ++++G+ A ISYNS LS V++TG + +V Y VDL LPE+V G
Sbjct: 39 RWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63 SMETGVDFTIFSIYLWEFNSSLE 85
S TG+ +I W F S L+
Sbjct: 94 SATTGLYKETNTILSWSFTSKLK 116
>UNIPROTKB|P81637 [details] [associations]
symbol:P81637 "Lectin alpha chain" species:99571 "Dioclea
guianensis" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0030246
"carbohydrate binding" evidence=IDA] InterPro:IPR001220
Pfam:PF00139 GO:GO:0046872 GO:GO:0030246 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005537
PROSITE:PS00307 InterPro:IPR000985 InterPro:IPR019825
PROSITE:PS00308 PDB:1H9P PDB:1H9W PDB:2JDZ PDB:2JE7 PDBsum:1H9P
PDBsum:1H9W PDBsum:2JDZ PDBsum:2JE7 ProteinModelPortal:P81637
SMR:P81637 EvolutionaryTrace:P81637 Uniprot:P81637
Length = 237
Score = 110 (43.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 5 RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
R ++++G+ A ISYNS LS V++TG + +V Y VDL LPE+V G
Sbjct: 39 RWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63 SMETGVDFTIFSIYLWEFNSSLE 85
S TG+ +I W F S L+
Sbjct: 94 SATTGLYKETNTILSWSFTSKLK 116
>TAIR|locus:2143528 [details] [associations]
symbol:AT5G03140 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=ISS] InterPro:IPR000719
InterPro:IPR001220 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 Pfam:PF00139 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0515 GO:GO:0030246 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 EMBL:AB005240 PROSITE:PS00307 InterPro:IPR019825
EMBL:AL163002 HOGENOM:HOG000116555 HSSP:P05046
ProtClustDB:CLSN2720712 EMBL:AY093212 EMBL:BT008791 EMBL:AK227062
IPI:IPI00549139 PIR:T48335 RefSeq:NP_195934.1 UniGene:At.33310
ProteinModelPortal:Q9LYX1 SMR:Q9LYX1 PaxDb:Q9LYX1 PRIDE:Q9LYX1
EnsemblPlants:AT5G03140.1 GeneID:831590 KEGG:ath:AT5G03140
GeneFarm:142 TAIR:At5g03140 InParanoid:Q9LYX1 OMA:QECENQI
PhylomeDB:Q9LYX1 Genevestigator:Q9LYX1 Uniprot:Q9LYX1
Length = 711
Score = 112 (44.5 bits), Expect = 0.00023, P = 0.00023
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
D+KSG +WI+Y+ S L+V + + N L +DL +++ + + GFS T
Sbjct: 187 DLKSGNAVNSWITYDGSGRVLTV-YVSYSNLKPKSPILSVPLDLDRYVSDSMFVGFSGST 245
Query: 67 GVDFTIFSIYLWEFNSSLEMDDETTNPVSN 96
I S+ W F+SS E E+ P+ N
Sbjct: 246 QGSTEIHSVDWWSFSSSFEESSESPPPMPN 275
>TAIR|locus:2095390 [details] [associations]
symbol:AT3G28230 "AT3G28230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0016458 "gene silencing"
evidence=IEA] InterPro:IPR018972 EMBL:CP002686 KO:K14767
Pfam:PF09368 IPI:IPI00891592 RefSeq:NP_001118727.1 UniGene:At.53531
EnsemblPlants:AT3G28230.2 GeneID:822449 KEGG:ath:AT3G28230
OMA:RQKSEDS ArrayExpress:F4IZ10 Uniprot:F4IZ10
Length = 174
Score = 103 (41.3 bits), Expect = 0.00024, P = 0.00024
Identities = 22/42 (52%), Positives = 24/42 (57%)
Query: 146 KHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGISKSTRFKN 187
+H K V KG RDIR GPY GE G NP S+S R KN
Sbjct: 133 QHKKIVINRKGQVRDIRTQVGPYAGETRGINPYTSRSIRIKN 174
>UNIPROTKB|P83721 [details] [associations]
symbol:P83721 "Mannose/glucose-specific lectin Cramoll"
species:252530 "Cratylia mollis" [GO:0005536 "glucose binding"
evidence=IDA] [GO:0005537 "mannose binding" evidence=IDA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001220 Pfam:PF00139
GO:GO:0046872 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005537 GO:GO:0005536
PROSITE:PS00307 InterPro:IPR000985 InterPro:IPR019825
PROSITE:PS00308 PDB:1MVQ PDBsum:1MVQ ProteinModelPortal:P83721
SMR:P83721 EvolutionaryTrace:P83721 Uniprot:P83721
Length = 234
Score = 106 (42.4 bits), Expect = 0.00026, P = 0.00026
Identities = 30/78 (38%), Positives = 38/78 (48%)
Query: 5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSM 64
R DV++G+ A ISYNS LS A + S + Y VDL LPE+V G S
Sbjct: 39 RWDVQNGKVGTAHISYNSVAKRLS-AVVSYPGGSSAT--VSYDVDLNNILPEWVRVGLSA 95
Query: 65 ETGVDFTIFSIYLWEFNS 82
TG+ +I W F S
Sbjct: 96 STGLYKETNTILSWSFTS 113
>UNIPROTKB|P81517 [details] [associations]
symbol:P81517 "Lectin alpha chain" species:83131 "Cratylia
argentea" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0030246 "carbohydrate
binding" evidence=IDA] InterPro:IPR001220 Pfam:PF00139
GO:GO:0046872 GO:GO:0030246 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005537 PROSITE:PS00307
InterPro:IPR000985 InterPro:IPR019825 PROSITE:PS00308 PDB:2D3P
PDB:2D3R PDBsum:2D3P PDBsum:2D3R ProteinModelPortal:P81517
SMR:P81517 EvolutionaryTrace:P81517 Uniprot:P81517
Length = 236
Score = 106 (42.4 bits), Expect = 0.00026, P = 0.00026
Identities = 30/81 (37%), Positives = 39/81 (48%)
Query: 5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSM 64
R +V+ G+ A ISYNS LS A + S + Y VDL LPE+V G S
Sbjct: 39 RWNVQDGKVGTAHISYNSVAKRLS-AIVSYPGGSSAT--VSYDVDLNNILPEWVRVGLSA 95
Query: 65 ETGVDFTIFSIYLWEFNSSLE 85
TG+ +I W F S L+
Sbjct: 96 STGLYKETNTILSWSFTSKLK 116
>UNIPROTKB|P58908 [details] [associations]
symbol:P58908 "Lectin alpha chain" species:192416 "Dioclea
rostrata" [GO:0000325 "plant-type vacuole" evidence=IDA]
[GO:0002553 "histamine secretion by mast cell" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IDA] [GO:0033095
"aleurone grain" evidence=IDA] InterPro:IPR001220 Pfam:PF00139
GO:GO:0002553 GO:GO:0033095 GO:GO:0046872 GO:GO:0030246
GO:GO:0000325 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005537 PROSITE:PS00307
InterPro:IPR000985 InterPro:IPR019825 PROSITE:PS00308 PDB:2ZBJ
PDBsum:2ZBJ ProteinModelPortal:P58908 SMR:P58908
EvolutionaryTrace:P58908 Uniprot:P58908
Length = 237
Score = 106 (42.4 bits), Expect = 0.00026, P = 0.00026
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 5 RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
R ++++G+ ISYNS LS V++TG + +V Y VDL LPE+V G
Sbjct: 39 RWNMQTGKVGTVHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63 SMETGVDFTIFSIYLWEFNSSLE 85
S TG+ +I W F S L+
Sbjct: 94 SATTGLYKETNTILSWSFTSKLK 116
>TAIR|locus:2142499 [details] [associations]
symbol:AT5G10530 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001220 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 Pfam:PF00139 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0515 GO:GO:0030246 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 EMBL:AL353995 PROSITE:PS00307 HOGENOM:HOG000116555
HSSP:P05046 EMBL:DQ446940 IPI:IPI00542311 PIR:T49986
RefSeq:NP_196615.1 UniGene:At.65503 ProteinModelPortal:Q9LXA5
SMR:Q9LXA5 PRIDE:Q9LXA5 EnsemblPlants:AT5G10530.1 GeneID:830918
KEGG:ath:AT5G10530 GeneFarm:2657 TAIR:At5g10530 InParanoid:Q9LXA5
OMA:YDSARRN PhylomeDB:Q9LXA5 ProtClustDB:CLSN2686400
Genevestigator:Q9LXA5 Uniprot:Q9LXA5
Length = 651
Score = 109 (43.4 bits), Expect = 0.00056, P = 0.00056
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 18 ISYNSSTHNLSVAFT-GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIY 76
I Y+S+ NLSV++T ++ + L Y +DL + LP VT GFS +G +
Sbjct: 187 IFYDSARRNLSVSWTYDLTSDPLENSSLSYIIDLSKVLPSEVTIGFSATSGGVTEGNRLL 246
Query: 77 LWEFNSSLEMDD 88
WEF+SSLE+ D
Sbjct: 247 SWEFSSSLELID 258
>UNIPROTKB|B3EWJ2 [details] [associations]
symbol:B3EWJ2 "Lectin alpha chain" species:1176036 "Dioclea
sclerocarpa" [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005536 "glucose binding" evidence=IDA] [GO:0005537 "mannose
binding" evidence=IDA] [GO:0030145 "manganese ion binding"
evidence=IDA] InterPro:IPR001220 Pfam:PF00139 GO:GO:0005773
GO:GO:0033095 GO:GO:0005509 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030145 GO:GO:0005537
GO:GO:0005536 PROSITE:PS00307 InterPro:IPR000985 InterPro:IPR019825
PROSITE:PS00308 Uniprot:B3EWJ2
Length = 237
Score = 102 (41.0 bits), Expect = 0.00091, P = 0.00091
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 5 RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
R ++++G+ ISYNS LS V+++G + +V Y VDL LPE+V G
Sbjct: 39 RWNMQTGKVGTVHISYNSVAKRLSAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63 SMETGVDFTIFSIYLWEFNSSLE 85
S TG+ +I W F S L+
Sbjct: 94 SATTGLYKETNTILSWSFTSKLK 116
>UNIPROTKB|P08902 [details] [associations]
symbol:P08902 "Lectin alpha chain" species:3837 "Dioclea
grandiflora" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0030246
"carbohydrate binding" evidence=IDA] InterPro:IPR001220
Pfam:PF00139 GO:GO:0046872 GO:GO:0030246 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005537
PROSITE:PS00307 InterPro:IPR000985 InterPro:IPR019825
PROSITE:PS00308 PIR:JU0176 PDB:1DGL PDB:1VLN PDB:2GDF PDB:2JE9
PDB:2JEC PDBsum:1DGL PDBsum:1VLN PDBsum:2GDF PDBsum:2JE9
PDBsum:2JEC ProteinModelPortal:P08902 SMR:P08902
EvolutionaryTrace:P08902 Uniprot:P08902
Length = 237
Score = 102 (41.0 bits), Expect = 0.00091, P = 0.00091
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 5 RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
R ++++G+ ISYNS LS V+++G + +V Y VDL LPE+V G
Sbjct: 39 RWNMQTGKVGTVHISYNSVAKRLSAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63 SMETGVDFTIFSIYLWEFNSSLE 85
S TG+ +I W F S L+
Sbjct: 94 SATTGLYKETNTILSWSFTSKLK 116
>UNIPROTKB|P42088 [details] [associations]
symbol:P42088 "Lectin" species:28956 "Leucomphalos
mildbraedii" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0030246
"carbohydrate binding" evidence=IDA] InterPro:IPR001220
Pfam:PF00139 GO:GO:0046872 GO:GO:0030246 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS00307 InterPro:IPR016363 InterPro:IPR019825
PIRSF:PIRSF002690 PROSITE:PS00308 PDB:2FMD PDBsum:2FMD
ProteinModelPortal:P42088 SMR:P42088 EvolutionaryTrace:P42088
Uniprot:P42088
Length = 240
Score = 102 (41.0 bits), Expect = 0.00094, P = 0.00094
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
D ++G+ A ISYNS++ LSV + + N+S V+ D V+L P V GFS T
Sbjct: 160 DWQNGKTATAHISYNSASKRLSVV-SSYPNSSPVVVSFD--VELNNVGPPDVRVGFSATT 216
Query: 67 GVDFTIFSIYLWEFNSSL 84
G +I W F SSL
Sbjct: 217 GQYTQTNNILAWSFRSSL 234
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 187 166 0.00097 107 3 11 22 0.38 32
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 606 (64 KB)
Total size of DFA: 161 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.08u 0.11s 14.19t Elapsed: 00:00:02
Total cpu time: 14.08u 0.11s 14.19t Elapsed: 00:00:02
Start: Sat May 11 01:46:12 2013 End: Sat May 11 01:46:14 2013