Query 047286
Match_columns 632
No_of_seqs 582 out of 5664
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 09:34:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047286.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047286hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 2E-107 5E-112 918.9 62.0 625 1-631 177-1227(1228)
2 PTZ00265 multidrug resistance 100.0 7.5E-79 1.6E-83 734.6 67.2 627 2-630 204-1466(1466)
3 PLN03130 ABC transporter C fam 100.0 1.2E-74 2.6E-79 704.3 67.0 611 11-629 456-1474(1622)
4 KOG0054 Multidrug resistance-a 100.0 1.6E-74 3.5E-79 667.9 57.9 567 55-628 479-1374(1381)
5 PLN03232 ABC transporter C fam 100.0 1.1E-73 2.5E-78 696.0 67.7 612 12-629 457-1471(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 2.4E-71 5.2E-76 676.5 67.5 618 5-629 467-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 2.8E-66 6E-71 630.4 65.9 537 86-629 679-1546(1560)
8 TIGR01271 CFTR_protein cystic 100.0 1.7E-63 3.7E-68 605.9 63.5 248 3-254 229-644 (1490)
9 KOG0058 Peptide exporter, ABC 100.0 1.1E-58 2.4E-63 497.9 34.6 281 349-631 245-706 (716)
10 KOG0055 Multidrug/pheromone ex 100.0 4.7E-51 1E-55 462.4 25.0 281 349-630 128-589 (1228)
11 COG2274 SunT ABC-type bacterio 100.0 3.2E-49 6.9E-54 441.8 37.0 279 349-630 251-709 (709)
12 COG1132 MdlB ABC-type multidru 100.0 8.5E-45 1.8E-49 408.3 39.0 280 348-631 108-566 (567)
13 PRK11174 cysteine/glutathione 100.0 2.2E-43 4.8E-48 399.0 38.2 279 349-631 120-586 (588)
14 TIGR00958 3a01208 Conjugate Tr 100.0 1.3E-42 2.8E-47 398.7 38.6 275 349-626 258-711 (711)
15 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 8E-42 1.7E-46 392.3 39.7 276 349-629 233-685 (686)
16 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 9.5E-42 2.1E-46 393.4 38.7 276 349-626 251-709 (710)
17 TIGR01193 bacteriocin_ABC ABC- 100.0 1.2E-41 2.7E-46 392.0 39.0 276 349-627 253-707 (708)
18 KOG0058 Peptide exporter, ABC 100.0 5.4E-43 1.2E-47 376.9 25.6 254 2-259 295-705 (716)
19 KOG0056 Heavy metal exporter H 100.0 1.5E-43 3.2E-48 360.4 19.1 200 430-630 465-775 (790)
20 COG1123 ATPase components of v 100.0 6.8E-43 1.5E-47 371.4 22.0 171 85-255 27-254 (539)
21 PRK11160 cysteine/glutathione 100.0 7.9E-41 1.7E-45 375.7 38.7 276 348-628 116-573 (574)
22 PRK11176 lipid transporter ATP 100.0 1.1E-40 2.4E-45 376.6 39.9 282 349-631 122-581 (582)
23 COG5265 ATM1 ABC-type transpor 100.0 1.6E-41 3.6E-46 342.3 24.8 199 427-627 186-496 (497)
24 TIGR01846 type_I_sec_HlyB type 100.0 4.8E-40 1E-44 377.8 39.4 278 349-630 236-693 (694)
25 TIGR03375 type_I_sec_LssB type 100.0 3.7E-40 7.9E-45 379.0 37.7 268 348-617 242-689 (694)
26 PRK10790 putative multidrug tr 100.0 1.1E-39 2.4E-44 368.9 39.7 280 349-630 122-576 (592)
27 COG4988 CydD ABC-type transpor 100.0 1.4E-39 3.1E-44 344.3 36.4 281 348-630 96-556 (559)
28 TIGR02203 MsbA_lipidA lipid A 100.0 4.3E-39 9.4E-44 363.2 39.7 282 349-631 111-570 (571)
29 COG4987 CydC ABC-type transpor 100.0 6E-39 1.3E-43 334.0 33.8 167 461-628 299-572 (573)
30 PRK13657 cyclic beta-1,2-gluca 100.0 1.7E-38 3.7E-43 358.8 40.1 279 349-629 113-570 (588)
31 TIGR01192 chvA glucan exporter 100.0 1.8E-38 3.9E-43 357.1 39.7 280 349-630 113-571 (585)
32 PTZ00265 multidrug resistance 100.0 7E-39 1.5E-43 387.8 38.7 280 349-630 154-729 (1466)
33 PRK10789 putative multidrug tr 100.0 2E-38 4.3E-43 356.1 38.7 282 348-630 92-551 (569)
34 TIGR02204 MsbA_rel ABC transpo 100.0 2.8E-37 6.1E-42 348.7 39.6 281 349-630 115-576 (576)
35 COG4172 ABC-type uncharacteriz 100.0 1.5E-38 3.1E-43 318.8 25.1 171 85-255 28-257 (534)
36 COG2274 SunT ABC-type bacterio 100.0 4.8E-38 1E-42 352.0 27.3 252 2-258 300-708 (709)
37 KOG0057 Mitochondrial Fe/S clu 100.0 7.6E-37 1.7E-41 318.5 29.3 203 425-631 276-588 (591)
38 COG4988 CydD ABC-type transpor 100.0 2.2E-36 4.7E-41 320.3 26.1 254 2-259 147-556 (559)
39 TIGR01842 type_I_sec_PrtD type 100.0 1.2E-34 2.7E-39 324.1 37.0 268 349-617 98-543 (544)
40 PRK11174 cysteine/glutathione 100.0 1.6E-35 3.4E-40 335.0 29.2 255 2-259 170-585 (588)
41 PRK10261 glutathione transport 100.0 7E-37 1.5E-41 345.8 17.5 167 85-251 34-264 (623)
42 COG1132 MdlB ABC-type multidru 100.0 2.5E-35 5.5E-40 331.6 27.1 252 3-259 160-565 (567)
43 PLN03232 ABC transporter C fam 100.0 5.5E-34 1.2E-38 348.4 34.3 203 426-629 540-840 (1495)
44 TIGR02868 CydC thiol reductant 100.0 1E-33 2.2E-38 316.3 33.0 234 348-581 109-487 (529)
45 PRK15134 microcin C ABC transp 100.0 1.3E-34 2.9E-39 322.7 25.3 162 85-246 27-247 (529)
46 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.6E-33 3.5E-38 323.6 29.6 249 3-257 283-684 (686)
47 PLN03130 ABC transporter C fam 100.0 3.8E-33 8.3E-38 341.1 34.5 204 425-629 539-840 (1622)
48 TIGR02857 CydD thiol reductant 100.0 1.2E-32 2.6E-37 307.6 34.4 253 348-600 100-529 (529)
49 KOG0056 Heavy metal exporter H 100.0 6E-34 1.3E-38 290.5 20.4 211 47-261 490-777 (790)
50 PRK11176 lipid transporter ATP 100.0 5.3E-33 1.1E-37 314.2 29.1 253 3-258 173-579 (582)
51 PRK15064 ABC transporter ATP-b 100.0 4.8E-33 1.1E-37 310.2 27.9 158 85-245 19-242 (530)
52 TIGR00958 3a01208 Conjugate Tr 100.0 3.6E-33 7.7E-38 320.8 27.5 246 2-254 308-710 (711)
53 TIGR03269 met_CoM_red_A2 methy 100.0 5.4E-34 1.2E-38 317.3 19.9 159 85-244 18-257 (520)
54 TIGR01193 bacteriocin_ABC ABC- 100.0 4.3E-33 9.4E-38 321.2 28.1 250 2-255 302-706 (708)
55 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-33 2.8E-38 312.9 22.5 159 85-244 29-228 (510)
56 PRK11160 cysteine/glutathione 100.0 6.2E-33 1.3E-37 311.8 27.2 249 4-256 169-572 (574)
57 PRK13549 xylose transporter AT 100.0 5.1E-33 1.1E-37 308.3 26.1 158 85-243 23-230 (506)
58 TIGR03375 type_I_sec_LssB type 100.0 7.1E-33 1.5E-37 318.7 28.1 243 2-246 292-689 (694)
59 PRK10762 D-ribose transporter 100.0 2.1E-33 4.5E-38 311.1 22.5 158 85-243 22-228 (501)
60 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 9.2E-33 2E-37 318.8 28.4 249 2-255 300-709 (710)
61 PRK10790 putative multidrug tr 100.0 1.2E-32 2.7E-37 311.5 28.3 252 3-258 173-575 (592)
62 COG4618 ArpD ABC-type protease 100.0 3.8E-33 8.3E-38 288.0 21.7 196 422-617 257-561 (580)
63 PRK10789 putative multidrug tr 100.0 3.9E-32 8.5E-37 305.2 29.4 254 3-259 145-551 (569)
64 PRK09700 D-allose transporter 100.0 7.7E-33 1.7E-37 307.3 22.8 159 85-244 23-233 (510)
65 TIGR01194 cyc_pep_trnsptr cycl 100.0 3E-31 6.6E-36 297.0 35.2 254 349-608 110-551 (555)
66 PRK11288 araG L-arabinose tran 100.0 2.5E-32 5.4E-37 302.4 25.5 153 85-239 22-223 (501)
67 TIGR01846 type_I_sec_HlyB type 100.0 6.3E-32 1.4E-36 310.6 29.2 252 3-257 286-691 (694)
68 PRK10982 galactose/methyl gala 100.0 3.7E-32 8.1E-37 300.4 26.1 157 85-243 16-221 (491)
69 PRK13657 cyclic beta-1,2-gluca 100.0 1E-31 2.2E-36 303.7 29.6 253 3-258 164-570 (588)
70 PRK11819 putative ABC transpor 100.0 1.1E-31 2.3E-36 300.5 28.6 156 85-244 25-249 (556)
71 TIGR02203 MsbA_lipidA lipid A 100.0 1.5E-31 3.2E-36 301.9 29.1 252 2-256 161-566 (571)
72 TIGR00956 3a01205 Pleiotropic 100.0 1.1E-30 2.5E-35 316.3 38.1 159 85-244 79-299 (1394)
73 KOG0057 Mitochondrial Fe/S clu 100.0 5.8E-32 1.3E-36 282.1 20.2 170 86-258 371-586 (591)
74 TIGR02633 xylG D-xylose ABC tr 100.0 1.8E-31 3.9E-36 295.9 25.2 157 85-242 19-227 (500)
75 COG4987 CydC ABC-type transpor 100.0 1.1E-31 2.4E-36 279.8 21.2 197 57-256 301-571 (573)
76 PRK10938 putative molybdenum t 100.0 8.6E-32 1.9E-36 297.6 20.7 159 85-245 21-224 (490)
77 PRK10636 putative ABC transpor 100.0 9.7E-31 2.1E-35 296.0 29.0 157 85-243 19-234 (638)
78 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1E-30 2.2E-35 292.6 28.7 157 85-245 23-248 (552)
79 TIGR01192 chvA glucan exporter 100.0 1.1E-30 2.5E-35 293.9 29.3 254 2-258 163-570 (585)
80 COG5265 ATM1 ABC-type transpor 100.0 1.2E-31 2.5E-36 271.1 17.3 200 52-256 219-496 (497)
81 TIGR02204 MsbA_rel ABC transpo 100.0 1.2E-30 2.7E-35 294.6 27.7 252 3-257 166-574 (576)
82 TIGR00957 MRP_assoc_pro multi 100.0 2.7E-30 5.8E-35 316.5 28.2 197 55-257 1242-1519(1522)
83 TIGR01842 type_I_sec_PrtD type 100.0 5.6E-30 1.2E-34 286.6 27.5 240 4-245 150-542 (544)
84 PRK10522 multidrug transporter 100.0 1.7E-28 3.7E-33 274.7 35.8 269 348-617 104-540 (547)
85 PTZ00243 ABC transporter; Prov 100.0 2.7E-29 5.8E-34 307.0 28.4 170 86-258 1329-1546(1560)
86 PLN03073 ABC transporter F fam 100.0 3.2E-29 6.9E-34 284.5 27.0 154 86-243 196-429 (718)
87 PLN03140 ABC transporter G fam 100.0 1.1E-27 2.4E-32 289.3 41.4 159 85-244 183-426 (1470)
88 KOG0054 Multidrug resistance-a 100.0 3.1E-28 6.7E-33 283.7 34.8 192 435-627 451-741 (1381)
89 TIGR01257 rim_protein retinal- 100.0 6.4E-27 1.4E-31 284.1 47.4 159 86-245 949-1149(2272)
90 PRK11147 ABC transporter ATPas 100.0 3.3E-29 7.2E-34 284.2 25.3 158 85-244 21-242 (635)
91 TIGR02857 CydD thiol reductant 100.0 1.7E-28 3.7E-33 274.2 23.8 225 3-229 152-529 (529)
92 COG4618 ArpD ABC-type protease 100.0 2.6E-28 5.6E-33 252.4 22.3 196 49-246 292-561 (580)
93 TIGR01271 CFTR_protein cystic 100.0 1.2E-27 2.6E-32 292.5 28.6 200 56-259 1162-1453(1490)
94 COG1126 GlnQ ABC-type polar am 100.0 6.7E-29 1.5E-33 231.7 13.3 165 85-250 20-230 (240)
95 TIGR02868 CydC thiol reductant 100.0 7E-28 1.5E-32 269.3 23.3 159 55-217 293-529 (529)
96 PRK13409 putative ATPase RIL; 100.0 6E-28 1.3E-32 269.5 17.9 141 86-232 93-287 (590)
97 COG1125 OpuBA ABC-type proline 99.9 9.6E-28 2.1E-32 228.3 12.1 168 85-253 19-233 (309)
98 COG1135 AbcC ABC-type metal io 99.9 2.1E-27 4.5E-32 232.9 12.8 167 85-252 24-238 (339)
99 COG1117 PstB ABC-type phosphat 99.9 1.7E-27 3.7E-32 221.2 10.0 163 85-249 25-241 (253)
100 TIGR00954 3a01203 Peroxysomal 99.9 4.2E-25 9.1E-30 251.0 31.2 253 348-602 194-653 (659)
101 COG0488 Uup ATPase components 99.9 5.6E-26 1.2E-30 247.2 22.7 154 86-243 22-238 (530)
102 TIGR01194 cyc_pep_trnsptr cycl 99.9 1.2E-25 2.6E-30 251.9 23.7 228 3-237 160-551 (555)
103 PRK10522 multidrug transporter 99.9 1.1E-25 2.3E-30 252.2 23.0 229 3-237 155-530 (547)
104 COG1127 Ttg2A ABC-type transpo 99.9 1E-25 2.2E-30 213.7 14.2 169 86-255 27-245 (263)
105 COG1120 FepC ABC-type cobalami 99.9 1.4E-25 3.1E-30 220.3 13.8 161 85-246 20-229 (258)
106 COG3842 PotA ABC-type spermidi 99.9 2.1E-25 4.6E-30 228.6 11.8 167 85-252 23-233 (352)
107 cd03289 ABCC_CFTR2 The CFTR su 99.9 1.5E-24 3.2E-29 220.3 17.7 169 85-257 22-236 (275)
108 cd03289 ABCC_CFTR2 The CFTR su 99.9 4.5E-25 9.7E-30 224.0 12.0 133 496-629 21-237 (275)
109 COG1129 MglA ABC-type sugar tr 99.9 1.5E-23 3.3E-28 222.3 23.2 154 85-239 26-228 (500)
110 COG1124 DppF ABC-type dipeptid 99.9 1.1E-24 2.4E-29 207.7 12.7 168 85-255 25-241 (252)
111 COG3840 ThiQ ABC-type thiamine 99.9 1.8E-24 3.8E-29 195.9 13.4 160 86-246 18-220 (231)
112 COG1136 SalX ABC-type antimicr 99.9 1.4E-24 3E-29 209.2 13.0 150 85-235 23-221 (226)
113 COG3839 MalK ABC-type sugar tr 99.9 1.4E-24 3E-29 221.4 13.7 167 85-252 21-230 (338)
114 COG3845 ABC-type uncharacteriz 99.9 8E-24 1.7E-28 219.8 19.2 151 85-238 22-222 (501)
115 COG1122 CbiO ABC-type cobalt t 99.9 2.5E-24 5.5E-29 211.5 14.6 160 85-246 22-229 (235)
116 COG1118 CysA ABC-type sulfate/ 99.9 1.8E-24 4E-29 211.7 12.6 166 85-251 20-233 (345)
117 COG4175 ProV ABC-type proline/ 99.9 1.3E-24 2.9E-29 212.8 11.6 166 85-253 46-262 (386)
118 COG1121 ZnuC ABC-type Mn/Zn tr 99.9 3.2E-24 6.8E-29 209.6 13.5 159 85-246 22-228 (254)
119 COG1116 TauB ABC-type nitrate/ 99.9 3E-24 6.5E-29 206.8 12.4 150 85-235 21-212 (248)
120 COG1131 CcmA ABC-type multidru 99.9 3.7E-24 8.1E-29 219.3 13.4 160 85-245 23-226 (293)
121 TIGR01186 proV glycine betaine 99.9 6.8E-24 1.5E-28 222.5 15.3 166 85-252 11-226 (363)
122 TIGR02314 ABC_MetN D-methionin 99.9 5.7E-24 1.2E-28 221.9 14.1 165 85-251 23-236 (343)
123 PRK14257 phosphate ABC transpo 99.9 7.6E-24 1.7E-28 220.6 14.2 162 86-249 101-317 (329)
124 TIGR00954 3a01203 Peroxysomal 99.9 2.6E-23 5.6E-28 236.5 19.0 224 2-231 246-653 (659)
125 COG3638 ABC-type phosphate/pho 99.9 7.3E-24 1.6E-28 200.6 11.0 159 85-244 22-236 (258)
126 cd03252 ABCC_Hemolysin The ABC 99.9 8.8E-23 1.9E-27 204.3 18.0 168 85-255 20-234 (237)
127 PRK11650 ugpC glycerol-3-phosp 99.9 2.4E-23 5.1E-28 219.0 14.1 166 85-252 22-231 (356)
128 PRK11432 fbpC ferric transport 99.9 2.1E-23 4.5E-28 218.8 13.2 165 85-251 24-232 (351)
129 COG0444 DppD ABC-type dipeptid 99.9 3.3E-23 7.1E-28 206.5 13.4 171 85-255 23-253 (316)
130 TIGR03265 PhnT2 putative 2-ami 99.9 3.2E-23 7E-28 217.8 14.1 165 85-251 22-230 (353)
131 cd03288 ABCC_SUR2 The SUR doma 99.9 1.5E-22 3.3E-27 204.8 18.5 168 85-255 39-253 (257)
132 cd03251 ABCC_MsbA MsbA is an e 99.9 1.4E-22 2.9E-27 202.5 17.3 160 85-246 20-226 (234)
133 PRK10851 sulfate/thiosulfate t 99.9 4.7E-23 1E-27 216.5 14.3 165 85-251 20-232 (353)
134 cd03261 ABC_Org_Solvent_Resist 99.9 6.9E-23 1.5E-27 204.7 14.7 160 85-246 18-227 (235)
135 PRK09452 potA putrescine/sperm 99.9 6.6E-23 1.4E-27 216.5 15.0 164 86-251 33-240 (375)
136 TIGR03258 PhnT 2-aminoethylpho 99.9 5.4E-23 1.2E-27 216.4 14.2 165 85-251 23-234 (362)
137 cd03253 ABCC_ATM1_transporter 99.9 2.4E-22 5.2E-27 201.0 17.7 166 85-253 19-231 (236)
138 PRK13537 nodulation ABC transp 99.9 5.6E-23 1.2E-27 212.6 13.3 160 85-246 25-228 (306)
139 PRK11022 dppD dipeptide transp 99.9 8.4E-23 1.8E-27 212.9 14.6 171 85-255 25-253 (326)
140 PRK15079 oligopeptide ABC tran 99.9 7.2E-23 1.6E-27 213.5 13.9 170 85-254 39-260 (331)
141 COG4555 NatA ABC-type Na+ tran 99.9 6.2E-23 1.3E-27 189.1 11.7 160 85-245 20-222 (245)
142 PRK14242 phosphate transporter 99.9 8E-23 1.7E-27 206.6 13.8 162 85-248 24-240 (253)
143 PRK14273 phosphate ABC transpo 99.9 1E-22 2.3E-27 205.8 14.6 166 85-252 25-245 (254)
144 PRK14269 phosphate ABC transpo 99.9 1.2E-22 2.6E-27 204.3 14.8 162 85-248 20-233 (246)
145 PRK11144 modC molybdate transp 99.9 1.1E-22 2.4E-27 214.3 15.1 162 85-248 16-221 (352)
146 TIGR03415 ABC_choXWV_ATP choli 99.9 7.3E-23 1.6E-27 215.7 13.6 166 86-253 43-262 (382)
147 TIGR00972 3a0107s01c2 phosphat 99.9 1.2E-22 2.6E-27 204.5 14.6 163 85-249 19-236 (247)
148 COG2884 FtsE Predicted ATPase 99.9 7.7E-23 1.7E-27 186.9 11.6 153 85-238 20-219 (223)
149 cd03254 ABCC_Glucan_exporter_l 99.9 2.2E-22 4.9E-27 200.3 16.0 159 85-245 21-226 (229)
150 PRK10744 pstB phosphate transp 99.9 1.7E-22 3.6E-27 205.0 15.3 165 85-251 31-250 (260)
151 PRK13651 cobalt transporter AT 99.9 1.2E-22 2.7E-27 209.6 14.2 160 85-246 25-255 (305)
152 PRK11308 dppF dipeptide transp 99.9 1.2E-22 2.7E-27 211.5 14.1 171 85-255 33-254 (327)
153 PRK14274 phosphate ABC transpo 99.9 2E-22 4.4E-27 204.3 15.3 165 85-251 30-249 (259)
154 PRK14251 phosphate ABC transpo 99.9 1.4E-22 3E-27 204.6 14.1 165 85-251 22-241 (251)
155 PRK14268 phosphate ABC transpo 99.9 1.7E-22 3.7E-27 204.7 14.7 165 85-251 30-248 (258)
156 PRK14250 phosphate ABC transpo 99.9 2.4E-22 5.2E-27 201.5 15.6 167 85-253 21-229 (241)
157 cd03296 ABC_CysA_sulfate_impor 99.9 1.5E-22 3.4E-27 202.7 14.1 161 85-247 20-228 (239)
158 cd03249 ABC_MTABC3_MDL1_MDL2 M 99.9 4E-22 8.7E-27 199.7 17.0 160 85-246 21-227 (238)
159 PRK13637 cbiO cobalt transport 99.9 1.2E-22 2.6E-27 208.6 13.4 160 85-246 25-235 (287)
160 cd03260 ABC_PstB_phosphate_tra 99.9 9E-23 1.9E-27 202.8 12.1 157 85-243 18-227 (227)
161 TIGR01188 drrA daunorubicin re 99.9 8.4E-23 1.8E-27 211.4 12.3 160 85-246 11-214 (302)
162 PRK09536 btuD corrinoid ABC tr 99.9 1.5E-22 3.2E-27 215.1 14.4 160 85-246 21-229 (402)
163 PRK11000 maltose/maltodextrin 99.9 1.4E-22 3E-27 214.6 14.2 165 85-251 21-229 (369)
164 PRK11153 metN DL-methionine tr 99.9 1.5E-22 3.3E-27 212.6 14.0 165 85-251 23-236 (343)
165 PRK14239 phosphate transporter 99.9 1.8E-22 3.9E-27 203.9 14.0 163 85-249 23-240 (252)
166 PRK11607 potG putrescine trans 99.9 1.8E-22 3.8E-27 213.6 14.4 166 85-252 37-246 (377)
167 PRK09473 oppD oligopeptide tra 99.9 1.9E-22 4.1E-27 210.4 14.3 171 85-255 34-261 (330)
168 PRK15093 antimicrobial peptide 99.9 2.1E-22 4.5E-27 210.6 14.6 170 85-254 25-257 (330)
169 PRK14245 phosphate ABC transpo 99.9 1.8E-22 3.9E-27 203.6 13.7 164 85-250 21-239 (250)
170 PRK14259 phosphate ABC transpo 99.9 3.3E-22 7.2E-27 203.6 15.5 165 85-251 31-259 (269)
171 PRK14244 phosphate ABC transpo 99.9 2.2E-22 4.8E-27 203.1 14.1 164 85-250 23-242 (251)
172 PRK13643 cbiO cobalt transport 99.9 2E-22 4.4E-27 207.0 13.9 160 85-246 24-234 (288)
173 PRK14235 phosphate transporter 99.9 2.8E-22 6.1E-27 203.9 14.7 161 86-248 38-254 (267)
174 cd03219 ABC_Mj1267_LivG_branch 99.9 2.1E-22 4.6E-27 201.4 13.5 160 85-246 18-233 (236)
175 PRK10070 glycine betaine trans 99.9 1.9E-22 4.2E-27 214.0 13.6 166 85-252 46-261 (400)
176 PRK14248 phosphate ABC transpo 99.9 2.9E-22 6.2E-27 204.2 14.2 163 86-250 40-257 (268)
177 PRK14267 phosphate ABC transpo 99.9 2.7E-22 5.9E-27 202.7 13.9 162 85-248 22-240 (253)
178 PRK14247 phosphate ABC transpo 99.9 3.7E-22 8.1E-27 201.3 14.9 165 85-251 21-240 (250)
179 PRK13536 nodulation factor exp 99.9 1.9E-22 4E-27 211.0 12.8 160 86-246 60-262 (340)
180 PRK13646 cbiO cobalt transport 99.9 1.8E-22 3.9E-27 207.3 12.4 160 85-246 25-236 (286)
181 PRK14240 phosphate transporter 99.9 4.1E-22 8.8E-27 201.1 14.7 163 85-249 21-238 (250)
182 TIGR03522 GldA_ABC_ATP gliding 99.9 2.7E-22 5.9E-27 207.4 13.3 160 85-246 20-222 (301)
183 PRK13631 cbiO cobalt transport 99.9 3.9E-22 8.5E-27 207.1 14.3 160 85-246 44-266 (320)
184 PRK13634 cbiO cobalt transport 99.9 2.2E-22 4.8E-27 206.9 12.3 160 85-246 25-236 (290)
185 PRK13650 cbiO cobalt transport 99.9 2.6E-22 5.6E-27 205.4 12.6 160 85-246 25-230 (279)
186 TIGR02142 modC_ABC molybdenum 99.9 4.2E-22 9.2E-27 210.3 14.6 165 85-251 15-227 (354)
187 PRK14270 phosphate ABC transpo 99.9 4.7E-22 1E-26 200.7 14.3 162 85-248 22-238 (251)
188 PRK14261 phosphate ABC transpo 99.9 5.6E-22 1.2E-26 200.4 14.8 167 85-253 24-245 (253)
189 cd03245 ABCC_bacteriocin_expor 99.9 5.4E-22 1.2E-26 196.3 14.3 152 85-238 22-220 (220)
190 PRK14275 phosphate ABC transpo 99.9 4.4E-22 9.6E-27 204.3 14.1 164 86-251 58-276 (286)
191 cd03263 ABC_subfamily_A The AB 99.9 3E-22 6.5E-27 198.1 12.4 157 85-243 20-219 (220)
192 cd03295 ABC_OpuCA_Osmoprotecti 99.9 5.2E-22 1.1E-26 199.3 14.1 161 85-247 19-227 (242)
193 PRK14256 phosphate ABC transpo 99.9 5.8E-22 1.3E-26 200.2 14.2 165 85-251 22-242 (252)
194 cd03244 ABCC_MRP_domain2 Domai 99.9 1.4E-21 3E-26 193.5 16.6 152 85-239 22-220 (221)
195 PRK13647 cbiO cobalt transport 99.9 5.1E-22 1.1E-26 202.7 13.7 157 85-243 23-225 (274)
196 cd03224 ABC_TM1139_LivF_branch 99.9 5.4E-22 1.2E-26 196.6 13.1 158 85-244 18-220 (222)
197 COG1126 GlnQ ABC-type polar am 99.9 4.4E-22 9.6E-27 186.1 11.5 128 497-626 20-236 (240)
198 cd03256 ABC_PhnC_transporter A 99.9 5.8E-22 1.2E-26 198.9 13.3 158 85-244 19-233 (241)
199 PRK13636 cbiO cobalt transport 99.9 6E-22 1.3E-26 203.1 13.7 160 85-246 24-232 (283)
200 cd03294 ABC_Pro_Gly_Bertaine T 99.9 6.6E-22 1.4E-26 201.4 13.8 166 85-252 42-257 (269)
201 PRK14237 phosphate transporter 99.9 8.3E-22 1.8E-26 200.5 14.5 160 86-247 39-253 (267)
202 PRK14249 phosphate ABC transpo 99.9 8.6E-22 1.9E-26 198.8 14.5 163 85-249 22-239 (251)
203 PRK14263 phosphate ABC transpo 99.9 9.6E-22 2.1E-26 199.2 14.9 161 86-248 27-248 (261)
204 COG1123 ATPase components of v 99.9 6.1E-22 1.3E-26 211.6 14.0 170 86-255 310-529 (539)
205 COG3840 ThiQ ABC-type thiamine 99.9 2.5E-22 5.5E-27 182.0 9.4 106 501-617 21-220 (231)
206 TIGR03005 ectoine_ehuA ectoine 99.9 8.3E-22 1.8E-26 199.0 14.3 165 85-251 18-242 (252)
207 COG0411 LivG ABC-type branched 99.9 1.1E-22 2.3E-27 194.4 7.2 160 85-247 22-241 (250)
208 cd03265 ABC_DrrA DrrA is the A 99.9 6.6E-22 1.4E-26 195.6 13.1 157 85-243 18-219 (220)
209 PRK13640 cbiO cobalt transport 99.9 8.3E-22 1.8E-26 202.0 14.2 160 85-246 25-233 (282)
210 cd03258 ABC_MetN_methionine_tr 99.9 7.4E-22 1.6E-26 197.1 13.5 159 85-245 23-230 (233)
211 PRK14262 phosphate ABC transpo 99.9 8.3E-22 1.8E-26 198.8 13.9 165 85-251 21-240 (250)
212 PRK11247 ssuB aliphatic sulfon 99.9 7E-22 1.5E-26 199.3 13.3 155 85-241 30-219 (257)
213 PRK14253 phosphate ABC transpo 99.9 9.5E-22 2.1E-26 198.3 14.3 162 85-248 21-236 (249)
214 cd03369 ABCC_NFT1 Domain 2 of 99.9 7.7E-22 1.7E-26 193.2 13.1 149 85-239 26-206 (207)
215 PRK13635 cbiO cobalt transport 99.9 6.7E-22 1.4E-26 202.2 13.1 160 85-246 25-230 (279)
216 TIGR03411 urea_trans_UrtD urea 99.9 8.3E-22 1.8E-26 197.9 13.5 159 85-245 20-231 (242)
217 PRK14243 phosphate transporter 99.9 1.2E-21 2.6E-26 199.0 14.8 164 85-250 28-253 (264)
218 PRK13644 cbiO cobalt transport 99.9 6.6E-22 1.4E-26 201.9 12.7 160 85-246 20-225 (274)
219 TIGR02315 ABC_phnC phosphonate 99.9 7.8E-22 1.7E-26 198.2 13.1 157 85-243 20-233 (243)
220 PRK14236 phosphate transporter 99.9 1.1E-21 2.3E-26 200.3 14.1 161 86-248 44-259 (272)
221 PRK10619 histidine/lysine/argi 99.9 1.3E-21 2.9E-26 198.1 14.7 161 85-247 23-243 (257)
222 PRK11831 putative ABC transpor 99.9 1.2E-21 2.6E-26 199.6 14.4 161 85-247 25-235 (269)
223 PRK11264 putative amino-acid A 99.9 1.1E-21 2.3E-26 198.1 13.9 165 85-251 21-239 (250)
224 TIGR01288 nodI ATP-binding ABC 99.9 8.2E-22 1.8E-26 204.1 13.3 160 85-246 22-225 (303)
225 PRK14265 phosphate ABC transpo 99.9 1.7E-21 3.6E-26 198.9 15.4 162 86-249 39-262 (274)
226 cd03226 ABC_cobalt_CbiO_domain 99.9 9.4E-22 2E-26 192.3 12.8 149 85-235 18-205 (205)
227 TIGR02770 nickel_nikD nickel i 99.9 1.2E-21 2.5E-26 195.1 13.6 167 86-252 5-222 (230)
228 TIGR02769 nickel_nikE nickel i 99.9 1.4E-21 3E-26 198.7 14.2 167 85-252 29-246 (265)
229 PRK14271 phosphate ABC transpo 99.9 1.4E-21 3E-26 199.6 14.2 163 85-249 39-255 (276)
230 COG4619 ABC-type uncharacteriz 99.9 6.2E-22 1.3E-26 177.0 10.1 150 85-234 21-212 (223)
231 PRK14252 phosphate ABC transpo 99.9 1.8E-21 3.8E-26 198.0 14.9 164 86-251 35-255 (265)
232 PRK14255 phosphate ABC transpo 99.9 1.2E-21 2.6E-26 197.9 13.6 163 85-249 23-240 (252)
233 COG1124 DppF ABC-type dipeptid 99.9 3.1E-22 6.7E-27 191.1 8.6 123 500-625 28-240 (252)
234 PRK10771 thiQ thiamine transpo 99.9 1.6E-21 3.4E-26 194.5 13.9 160 85-246 17-220 (232)
235 PRK14238 phosphate transporter 99.9 2E-21 4.4E-26 198.0 14.9 163 86-250 43-260 (271)
236 cd03259 ABC_Carb_Solutes_like 99.9 6.1E-22 1.3E-26 194.9 10.6 152 85-238 18-213 (213)
237 PRK14272 phosphate ABC transpo 99.9 2E-21 4.4E-26 196.3 14.7 165 85-251 22-242 (252)
238 cd03218 ABC_YhbG The ABC trans 99.9 1.3E-21 2.8E-26 195.2 13.0 159 85-245 18-222 (232)
239 PRK09493 glnQ glutamine ABC tr 99.9 1.3E-21 2.9E-26 196.1 13.1 161 85-247 19-227 (240)
240 cd03298 ABC_ThiQ_thiamine_tran 99.9 1.5E-21 3.1E-26 191.9 13.0 152 85-238 16-211 (211)
241 PRK14266 phosphate ABC transpo 99.9 1.7E-21 3.7E-26 196.5 13.9 165 85-251 21-240 (250)
242 PRK14241 phosphate transporter 99.9 1.6E-21 3.6E-26 197.5 13.7 161 85-247 22-244 (258)
243 TIGR03864 PQQ_ABC_ATP ABC tran 99.9 1.7E-21 3.6E-26 194.9 13.5 160 85-246 19-222 (236)
244 PRK13641 cbiO cobalt transport 99.9 1.5E-21 3.2E-26 200.7 13.4 160 85-246 25-235 (287)
245 PRK14260 phosphate ABC transpo 99.9 1.9E-21 4.1E-26 197.2 13.8 163 85-249 25-247 (259)
246 COG4559 ABC-type hemin transpo 99.9 1.5E-21 3.2E-26 181.4 11.8 160 85-246 19-231 (259)
247 PRK13652 cbiO cobalt transport 99.9 1.4E-21 3E-26 199.9 12.9 160 85-246 22-228 (277)
248 PRK13633 cobalt transporter AT 99.9 1.2E-21 2.7E-26 200.6 12.4 160 85-246 28-234 (280)
249 cd03293 ABC_NrtD_SsuB_transpor 99.9 7.1E-22 1.5E-26 195.4 10.3 155 85-241 22-219 (220)
250 PRK14254 phosphate ABC transpo 99.9 2.8E-21 6.1E-26 198.1 14.8 160 86-247 58-271 (285)
251 cd03268 ABC_BcrA_bacitracin_re 99.9 2.4E-21 5.2E-26 189.9 13.4 152 85-238 18-208 (208)
252 TIGR00968 3a0106s01 sulfate AB 99.9 3.9E-21 8.4E-26 192.2 15.1 161 85-247 18-222 (237)
253 cd03291 ABCC_CFTR1 The CFTR su 99.9 1.6E-20 3.5E-25 191.4 19.8 158 86-246 56-248 (282)
254 PRK13639 cbiO cobalt transport 99.9 1.6E-21 3.6E-26 199.1 12.5 160 85-246 20-227 (275)
255 PRK13638 cbiO cobalt transport 99.9 1.8E-21 4E-26 198.5 12.6 160 85-246 19-226 (271)
256 PRK14246 phosphate ABC transpo 99.9 2.9E-21 6.2E-26 195.3 13.7 168 85-254 28-250 (257)
257 TIGR03410 urea_trans_UrtE urea 99.9 2E-21 4.4E-26 193.5 12.4 157 85-243 18-219 (230)
258 PRK13645 cbiO cobalt transport 99.9 2.5E-21 5.5E-26 199.3 13.3 160 85-246 29-241 (289)
259 PRK10575 iron-hydroxamate tran 99.9 2.3E-21 4.9E-26 197.2 12.6 158 86-245 30-237 (265)
260 TIGR00960 3a0501s02 Type II (G 99.9 1.2E-21 2.6E-26 193.2 10.2 148 85-234 21-216 (216)
261 PRK11231 fecE iron-dicitrate t 99.9 2.9E-21 6.3E-26 195.4 13.1 159 85-245 20-227 (255)
262 PRK13642 cbiO cobalt transport 99.9 3.1E-21 6.6E-26 197.4 13.3 160 85-246 25-230 (277)
263 PRK11124 artP arginine transpo 99.9 3.7E-21 8.1E-26 193.1 13.7 159 85-245 20-230 (242)
264 PRK13649 cbiO cobalt transport 99.9 2.8E-21 6E-26 198.2 13.0 160 85-246 25-235 (280)
265 PRK13648 cbiO cobalt transport 99.9 2E-21 4.4E-26 198.0 11.9 160 85-246 27-232 (269)
266 cd03266 ABC_NatA_sodium_export 99.9 2.5E-21 5.4E-26 191.2 12.2 152 85-238 23-218 (218)
267 PRK10895 lipopolysaccharide AB 99.9 5.1E-21 1.1E-25 192.0 14.6 159 85-245 21-226 (241)
268 PRK09984 phosphonate/organopho 99.9 3.3E-21 7.2E-26 195.7 13.3 157 85-243 22-240 (262)
269 PRK14258 phosphate ABC transpo 99.9 3.7E-21 7.9E-26 195.2 13.5 163 85-249 25-249 (261)
270 PRK11614 livF leucine/isoleuci 99.9 3.6E-21 7.8E-26 192.6 13.2 159 85-245 23-226 (237)
271 PRK14264 phosphate ABC transpo 99.9 4.3E-21 9.4E-26 198.7 14.1 160 86-247 64-291 (305)
272 PRK13632 cbiO cobalt transport 99.9 3.7E-21 8E-26 196.2 13.3 160 85-246 27-232 (271)
273 PRK15112 antimicrobial peptide 99.9 3.9E-21 8.4E-26 195.6 13.4 165 85-249 31-243 (267)
274 cd03255 ABC_MJ0796_Lo1CDE_FtsE 99.9 2.3E-21 5.1E-26 191.4 11.4 148 85-234 22-218 (218)
275 cd03301 ABC_MalK_N The N-termi 99.9 2.6E-21 5.5E-26 190.5 11.6 152 85-238 18-213 (213)
276 cd03235 ABC_Metallic_Cations A 99.9 2.5E-21 5.3E-26 190.6 11.5 151 85-238 17-213 (213)
277 cd03299 ABC_ModC_like Archeal 99.9 6.4E-21 1.4E-25 190.4 14.6 161 85-247 17-221 (235)
278 cd03264 ABC_drug_resistance_li 99.9 3.3E-21 7.2E-26 189.3 12.1 151 85-238 18-211 (211)
279 COG4172 ABC-type uncharacteriz 99.9 3.5E-21 7.5E-26 194.2 12.3 169 86-254 306-525 (534)
280 PRK11300 livG leucine/isoleuci 99.9 4.3E-21 9.4E-26 194.2 13.1 159 85-245 23-243 (255)
281 PRK10418 nikD nickel transport 99.8 7.7E-21 1.7E-25 192.1 14.8 164 85-249 21-234 (254)
282 TIGR03873 F420-0_ABC_ATP propo 99.8 4.6E-21 1E-25 194.0 13.1 159 85-245 19-226 (256)
283 PRK10253 iron-enterobactin tra 99.8 5.8E-21 1.3E-25 194.2 13.7 159 85-245 25-233 (265)
284 TIGR01277 thiQ thiamine ABC tr 99.8 5.7E-21 1.2E-25 187.9 13.0 153 85-239 16-212 (213)
285 COG4604 CeuD ABC-type enteroch 99.8 3.9E-21 8.5E-26 176.4 10.8 161 85-246 19-226 (252)
286 COG1135 AbcC ABC-type metal io 99.8 1.9E-21 4.1E-26 191.2 9.1 119 498-618 25-233 (339)
287 PRK11629 lolD lipoprotein tran 99.8 5E-21 1.1E-25 191.0 12.4 153 85-239 27-228 (233)
288 cd03300 ABC_PotA_N PotA is an 99.8 5E-21 1.1E-25 190.8 12.3 160 85-246 18-221 (232)
289 PRK11701 phnK phosphonate C-P 99.8 8.3E-21 1.8E-25 192.4 13.8 168 85-252 24-248 (258)
290 PRK10261 glutathione transport 99.8 5E-21 1.1E-25 216.8 13.4 169 85-253 342-561 (623)
291 PRK13548 hmuV hemin importer A 99.8 1E-20 2.2E-25 191.6 14.1 159 85-245 20-230 (258)
292 COG4148 ModC ABC-type molybdat 99.8 8.3E-21 1.8E-25 183.2 12.6 161 86-247 17-220 (352)
293 cd03269 ABC_putative_ATPase Th 99.8 6.7E-21 1.5E-25 187.0 12.3 152 85-238 18-210 (210)
294 PRK10247 putative ABC transpor 99.8 5.3E-21 1.2E-25 189.7 11.3 155 85-241 25-223 (225)
295 TIGR02211 LolD_lipo_ex lipopro 99.8 5.2E-21 1.1E-25 189.4 11.1 149 85-235 23-220 (221)
296 cd03247 ABCC_cytochrome_bd The 99.8 9.2E-21 2E-25 181.0 12.3 128 85-238 20-178 (178)
297 PRK14257 phosphate ABC transpo 99.8 4.9E-21 1.1E-25 199.5 11.2 116 502-617 105-314 (329)
298 COG4608 AppF ABC-type oligopep 99.8 5.4E-21 1.2E-25 186.8 10.5 124 501-626 35-209 (268)
299 cd03288 ABCC_SUR2 The SUR doma 99.8 6.7E-21 1.4E-25 192.8 11.6 129 501-629 43-256 (257)
300 TIGR01978 sufC FeS assembly AT 99.8 8.9E-21 1.9E-25 190.5 12.2 158 85-244 18-233 (243)
301 COG3839 MalK ABC-type sugar tr 99.8 5.3E-21 1.2E-25 195.3 10.4 123 498-622 22-229 (338)
302 cd03225 ABC_cobalt_CbiO_domain 99.8 7.7E-21 1.7E-25 186.8 10.7 147 85-233 19-211 (211)
303 TIGR02673 FtsE cell division A 99.8 7.6E-21 1.6E-25 187.2 10.6 147 85-233 20-214 (214)
304 cd03248 ABCC_TAP TAP, the Tran 99.8 2.3E-20 4.9E-25 185.4 14.1 148 85-234 32-226 (226)
305 PRK09544 znuC high-affinity zi 99.8 2E-20 4.4E-25 188.2 13.8 159 85-245 22-209 (251)
306 COG4181 Predicted ABC-type tra 99.8 1.6E-20 3.4E-25 168.6 11.5 151 86-237 29-227 (228)
307 TIGR03771 anch_rpt_ABC anchore 99.8 1E-20 2.2E-25 187.4 11.4 157 88-245 1-201 (223)
308 TIGR01184 ntrCD nitrate transp 99.8 7.3E-21 1.6E-25 189.3 10.4 156 86-243 4-202 (230)
309 PRK10584 putative ABC transpor 99.8 1E-20 2.3E-25 188.1 11.4 151 85-237 28-227 (228)
310 cd03257 ABC_NikE_OppD_transpor 99.8 1.8E-20 3.9E-25 186.5 13.1 152 85-238 23-228 (228)
311 TIGR03740 galliderm_ABC gallid 99.8 1.9E-20 4.1E-25 185.6 13.1 156 85-242 18-210 (223)
312 COG4152 ABC-type uncharacteriz 99.8 3.8E-21 8.3E-26 182.2 7.7 161 85-246 20-220 (300)
313 cd03292 ABC_FtsE_transporter F 99.8 8.6E-21 1.9E-25 186.9 10.6 148 85-234 19-214 (214)
314 COG4598 HisP ABC-type histidin 99.8 8.9E-21 1.9E-25 171.3 9.6 164 86-250 25-246 (256)
315 cd03297 ABC_ModC_molybdenum_tr 99.8 1.1E-20 2.5E-25 185.9 11.3 151 85-238 16-214 (214)
316 KOG0927 Predicted transporter 99.8 1.8E-20 3.9E-25 195.7 12.9 74 171-245 217-309 (614)
317 TIGR02323 CP_lyasePhnK phospho 99.8 3.8E-20 8.2E-25 187.1 15.0 168 85-252 21-245 (253)
318 PRK13547 hmuV hemin importer A 99.8 2.9E-20 6.3E-25 189.1 14.1 159 85-245 19-244 (272)
319 cd03262 ABC_HisP_GlnQ_permease 99.8 8.8E-21 1.9E-25 186.6 9.9 148 85-234 18-213 (213)
320 PRK11248 tauB taurine transpor 99.8 1.6E-20 3.4E-25 189.7 11.6 155 85-241 19-216 (255)
321 cd03252 ABCC_Hemolysin The ABC 99.8 1.6E-20 3.4E-25 188.0 11.4 129 498-627 21-235 (237)
322 PRK10908 cell division protein 99.8 2.2E-20 4.7E-25 185.0 11.7 150 85-236 20-217 (222)
323 PRK03695 vitamin B12-transport 99.8 6.4E-20 1.4E-24 184.6 15.1 159 85-245 14-222 (248)
324 PRK10419 nikE nickel transport 99.8 3.1E-20 6.6E-25 189.0 12.8 167 85-252 30-247 (268)
325 COG0410 LivF ABC-type branched 99.8 3.9E-20 8.6E-25 175.5 12.4 160 86-246 22-227 (237)
326 COG4608 AppF ABC-type oligopep 99.8 5.2E-20 1.1E-24 179.9 13.2 154 85-255 31-209 (268)
327 cd03250 ABCC_MRP_domain1 Domai 99.8 7.9E-20 1.7E-24 178.6 14.4 146 85-233 23-204 (204)
328 PRK15134 microcin C ABC transp 99.8 3.4E-20 7.4E-25 207.0 13.3 167 86-252 305-522 (529)
329 cd03246 ABCC_Protease_Secretio 99.8 3.6E-20 7.8E-25 176.0 11.3 121 85-234 20-173 (173)
330 PRK15056 manganese/iron transp 99.8 5.9E-20 1.3E-24 187.4 13.4 158 85-245 25-230 (272)
331 cd03234 ABCG_White The White s 99.8 4E-20 8.6E-25 183.6 11.4 152 85-238 25-226 (226)
332 PLN03211 ABC transporter G-25; 99.8 2.9E-20 6.3E-25 210.4 11.6 180 63-244 55-295 (659)
333 COG1134 TagH ABC-type polysacc 99.8 4.1E-20 8.9E-25 177.0 10.3 159 85-245 45-236 (249)
334 cd03267 ABC_NatA_like Similar 99.8 9.4E-20 2E-24 182.0 12.4 152 85-238 39-236 (236)
335 COG1137 YhbG ABC-type (unclass 99.8 1.1E-20 2.5E-25 173.9 4.8 162 85-247 22-230 (243)
336 COG3842 PotA ABC-type spermidi 99.8 3.9E-20 8.4E-25 190.0 9.0 124 497-622 23-232 (352)
337 TIGR03269 met_CoM_red_A2 methy 99.8 9.9E-20 2.1E-24 203.0 12.3 159 86-245 303-517 (520)
338 PRK13546 teichoic acids export 99.8 1.7E-19 3.7E-24 182.5 12.9 161 85-246 42-233 (264)
339 TIGR02982 heterocyst_DevA ABC 99.8 1.5E-19 3.2E-24 178.8 11.9 148 85-234 23-219 (220)
340 cd03232 ABC_PDR_domain2 The pl 99.8 8.6E-20 1.9E-24 176.4 10.0 133 85-238 25-192 (192)
341 cd03228 ABCC_MRP_Like The MRP 99.8 1.4E-19 3E-24 171.6 10.7 120 85-233 20-171 (171)
342 CHL00131 ycf16 sulfate ABC tra 99.8 2.1E-19 4.6E-24 181.5 12.6 158 85-243 25-239 (252)
343 cd03290 ABCC_SUR1_N The SUR do 99.8 5.2E-19 1.1E-23 174.6 15.1 146 85-233 19-218 (218)
344 cd03217 ABC_FeS_Assembly ABC-t 99.8 1.8E-19 3.9E-24 175.3 11.4 135 85-241 18-190 (200)
345 PRK13549 xylose transporter AT 99.8 1.8E-19 4E-24 200.0 12.5 157 85-243 280-492 (506)
346 COG1136 SalX ABC-type antimicr 99.8 1.2E-19 2.7E-24 175.0 9.6 111 498-608 24-223 (226)
347 PRK11288 araG L-arabinose tran 99.8 1.5E-19 3.2E-24 200.6 11.6 156 86-243 272-483 (501)
348 cd03253 ABCC_ATM1_transporter 99.8 2E-19 4.2E-24 180.0 11.3 130 498-628 20-235 (236)
349 cd03213 ABCG_EPDR ABCG transpo 99.8 1.7E-19 3.6E-24 174.6 10.2 133 85-238 27-194 (194)
350 cd03291 ABCC_CFTR1 The CFTR su 99.8 7.4E-19 1.6E-23 179.2 15.4 121 505-626 63-256 (282)
351 cd03233 ABC_PDR_domain1 The pl 99.8 2.3E-19 5.1E-24 174.7 11.1 139 85-238 25-202 (202)
352 TIGR02314 ABC_MetN D-methionin 99.8 2.5E-19 5.5E-24 187.1 11.9 126 500-627 26-242 (343)
353 cd03230 ABC_DR_subfamily_A Thi 99.8 2.7E-19 5.9E-24 169.9 11.2 122 85-234 18-173 (173)
354 TIGR01187 potA spermidine/putr 99.8 2.6E-19 5.7E-24 186.8 12.0 152 98-251 1-196 (325)
355 cd03215 ABC_Carb_Monos_II This 99.8 1.9E-19 4E-24 172.5 10.0 126 85-234 18-182 (182)
356 PRK10762 D-ribose transporter 99.8 2.2E-19 4.7E-24 199.2 11.8 157 85-243 270-482 (501)
357 cd03223 ABCD_peroxisomal_ALDP 99.8 2E-19 4.4E-24 169.5 9.8 124 85-232 19-163 (166)
358 COG4161 ArtP ABC-type arginine 99.8 3E-19 6.5E-24 158.6 10.1 158 86-244 21-229 (242)
359 cd03251 ABCC_MsbA MsbA is an e 99.8 2.4E-19 5.3E-24 179.0 10.5 124 501-625 24-233 (234)
360 cd03229 ABC_Class3 This class 99.8 4.3E-19 9.2E-24 169.4 11.5 122 86-233 19-178 (178)
361 PRK15064 ABC transporter ATP-b 99.8 5.1E-19 1.1E-23 197.6 13.3 158 86-245 338-525 (530)
362 COG4107 PhnK ABC-type phosphon 99.8 3.3E-19 7.1E-24 160.3 9.3 172 85-256 24-252 (258)
363 COG4525 TauB ABC-type taurine 99.8 2.2E-19 4.8E-24 164.6 8.4 156 85-241 23-220 (259)
364 cd03249 ABC_MTABC3_MDL1_MDL2 M 99.8 4.4E-19 9.5E-24 177.6 11.4 130 498-628 22-237 (238)
365 TIGR01257 rim_protein retinal- 99.8 3.6E-19 7.8E-24 217.2 12.7 160 86-246 1958-2160(2272)
366 COG1125 OpuBA ABC-type proline 99.8 2.8E-19 6E-24 170.8 9.2 123 498-622 20-231 (309)
367 PRK09700 D-allose transporter 99.8 4.4E-19 9.6E-24 197.3 12.4 155 85-241 281-494 (510)
368 PRK09580 sufC cysteine desulfu 99.8 4.1E-19 8.8E-24 179.0 11.0 158 85-243 19-233 (248)
369 PRK13631 cbiO cobalt transport 99.8 3E-19 6.5E-24 185.6 10.2 115 500-616 47-265 (320)
370 TIGR03608 L_ocin_972_ABC putat 99.8 4.4E-19 9.6E-24 173.6 10.5 143 85-229 16-206 (206)
371 PRK15439 autoinducer 2 ABC tra 99.8 4.8E-19 1E-23 196.6 11.9 158 85-244 281-491 (510)
372 PRK15177 Vi polysaccharide exp 99.8 9.6E-19 2.1E-23 171.8 12.3 158 86-244 6-191 (213)
373 cd03214 ABC_Iron-Siderophores_ 99.8 7.2E-19 1.6E-23 168.2 11.1 123 85-238 17-180 (180)
374 TIGR03265 PhnT2 putative 2-ami 99.8 6.7E-19 1.4E-23 185.2 11.1 120 501-622 26-230 (353)
375 PRK11308 dppF dipeptide transp 99.8 1E-18 2.2E-23 182.1 12.0 122 501-624 37-252 (327)
376 PRK09473 oppD oligopeptide tra 99.8 8.7E-19 1.9E-23 182.9 11.5 124 501-625 38-260 (330)
377 TIGR01186 proV glycine betaine 99.8 1E-18 2.2E-23 183.5 11.8 123 498-622 12-225 (363)
378 TIGR02633 xylG D-xylose ABC tr 99.8 6.8E-19 1.5E-23 195.4 11.1 157 85-242 278-489 (500)
379 cd03254 ABCC_Glucan_exporter_l 99.8 1.1E-18 2.3E-23 173.8 10.9 121 497-617 21-227 (229)
380 COG1118 CysA ABC-type sulfate/ 99.8 9.2E-19 2E-23 171.9 10.0 121 498-620 21-231 (345)
381 cd03216 ABC_Carb_Monos_I This 99.8 2.1E-18 4.5E-23 162.1 12.1 108 85-236 18-162 (163)
382 COG4167 SapF ABC-type antimicr 99.8 4.2E-18 9.1E-23 154.5 13.2 168 85-252 31-246 (267)
383 COG1116 TauB ABC-type nitrate/ 99.8 8.6E-19 1.9E-23 169.2 9.3 108 497-606 21-212 (248)
384 cd03231 ABC_CcmA_heme_exporter 99.8 1.9E-18 4.1E-23 168.3 11.8 143 85-229 18-198 (201)
385 COG1117 PstB ABC-type phosphat 99.8 5.6E-19 1.2E-23 164.6 7.4 123 496-618 24-239 (253)
386 PRK11432 fbpC ferric transport 99.8 1.4E-18 3.1E-23 182.4 11.3 120 501-622 28-232 (351)
387 TIGR00955 3a01204 The Eye Pigm 99.8 2E-18 4.3E-23 195.5 13.0 158 85-244 43-255 (617)
388 PRK11650 ugpC glycerol-3-phosp 99.8 1.8E-18 3.9E-23 182.1 11.6 123 498-622 23-230 (356)
389 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 99.8 1.5E-18 3.2E-23 171.9 10.4 153 85-238 40-224 (224)
390 PRK11022 dppD dipeptide transp 99.8 2.1E-18 4.5E-23 179.9 11.8 122 501-624 29-251 (326)
391 cd03244 ABCC_MRP_domain2 Domai 99.8 1.8E-18 4E-23 171.1 10.2 113 498-610 23-220 (221)
392 cd03237 ABC_RNaseL_inhibitor_d 99.8 4.4E-18 9.5E-23 170.5 12.9 157 86-244 13-206 (246)
393 TIGR03864 PQQ_ABC_ATP ABC tran 99.8 2.8E-18 6.1E-23 171.5 11.4 116 500-617 22-222 (236)
394 PRK11153 metN DL-methionine tr 99.8 2.9E-18 6.3E-23 180.2 11.7 128 498-627 24-242 (343)
395 PRK10636 putative ABC transpor 99.8 3.2E-18 7E-23 194.2 12.8 156 86-243 331-515 (638)
396 PRK13543 cytochrome c biogenes 99.8 3.6E-18 7.8E-23 168.1 11.2 145 85-231 29-212 (214)
397 COG4167 SapF ABC-type antimicr 99.8 2.6E-18 5.6E-23 155.8 9.2 127 501-631 35-255 (267)
398 PRK15079 oligopeptide ABC tran 99.8 3.9E-18 8.5E-23 177.9 11.9 122 501-624 43-259 (331)
399 cd03261 ABC_Org_Solvent_Resist 99.8 3.5E-18 7.6E-23 170.7 11.1 121 500-623 21-232 (235)
400 KOG0062 ATPase component of AB 99.7 8.7E-18 1.9E-22 174.8 13.9 154 86-243 99-283 (582)
401 PRK09452 potA putrescine/sperm 99.7 3.4E-18 7.3E-23 180.8 11.1 120 501-622 36-240 (375)
402 PRK10535 macrolide transporter 99.7 4.1E-18 9E-23 193.8 12.7 158 85-244 26-231 (648)
403 PRK13545 tagH teichoic acids e 99.7 6E-18 1.3E-22 181.8 13.1 161 85-246 42-233 (549)
404 COG1120 FepC ABC-type cobalami 99.7 2.5E-18 5.5E-23 169.2 9.1 116 500-617 23-229 (258)
405 COG0396 sufC Cysteine desulfur 99.7 1.4E-17 3E-22 157.5 13.1 159 85-245 22-233 (251)
406 PRK00349 uvrA excinuclease ABC 99.7 2.1E-17 4.5E-22 191.1 17.4 76 170-245 484-585 (943)
407 cd03238 ABC_UvrA The excision 99.7 7.4E-18 1.6E-22 159.3 11.2 123 85-234 13-166 (176)
408 PRK11000 maltose/maltodextrin 99.7 5E-18 1.1E-22 179.9 11.2 118 500-619 24-226 (369)
409 COG4181 Predicted ABC-type tra 99.7 2.1E-18 4.6E-23 154.9 6.8 107 500-608 31-227 (228)
410 COG4615 PvdE ABC-type sideroph 99.7 2.2E-17 4.7E-22 166.3 14.7 178 53-237 283-529 (546)
411 cd03294 ABC_Pro_Gly_Bertaine T 99.7 9.3E-18 2E-22 170.9 12.2 125 498-624 43-258 (269)
412 PRK10938 putative molybdenum t 99.7 3.9E-18 8.4E-23 188.9 10.2 151 86-238 279-485 (490)
413 PRK11607 potG putrescine trans 99.7 6.4E-18 1.4E-22 179.0 11.4 119 502-622 42-245 (377)
414 cd03219 ABC_Mj1267_LivG_branch 99.7 6.6E-18 1.4E-22 168.9 10.8 118 498-617 19-233 (236)
415 PRK11819 putative ABC transpor 99.7 9.6E-18 2.1E-22 188.1 13.2 158 86-245 343-533 (556)
416 PRK13538 cytochrome c biogenes 99.7 6.5E-18 1.4E-22 165.0 10.3 143 85-229 19-202 (204)
417 TIGR03415 ABC_choXWV_ATP choli 99.7 9.2E-18 2E-22 177.1 12.2 122 501-624 46-262 (382)
418 PRK10851 sulfate/thiosulfate t 99.7 8.5E-18 1.9E-22 176.8 11.6 120 501-622 24-232 (353)
419 COG4586 ABC-type uncharacteriz 99.7 3.3E-18 7.2E-23 165.0 7.7 158 85-246 42-247 (325)
420 COG4615 PvdE ABC-type sideroph 99.7 4.4E-16 9.5E-21 157.0 23.0 258 348-608 104-529 (546)
421 cd03258 ABC_MetN_methionine_tr 99.7 8.9E-18 1.9E-22 167.6 11.0 118 498-617 24-231 (233)
422 TIGR00630 uvra excinuclease AB 99.7 1.2E-17 2.5E-22 192.8 13.3 75 171-245 483-583 (924)
423 TIGR01188 drrA daunorubicin re 99.7 7.2E-18 1.6E-22 174.6 10.5 117 499-617 13-214 (302)
424 TIGR03719 ABC_ABC_ChvD ATP-bin 99.7 1.2E-17 2.6E-22 187.3 13.1 156 86-243 341-529 (552)
425 cd03263 ABC_subfamily_A The AB 99.7 6.8E-18 1.5E-22 167.0 9.9 116 497-614 20-219 (220)
426 PRK10982 galactose/methyl gala 99.7 8.2E-18 1.8E-22 186.2 11.6 156 86-241 267-476 (491)
427 COG3638 ABC-type phosphate/pho 99.7 2.6E-18 5.6E-23 163.1 6.4 118 497-616 22-237 (258)
428 PLN03073 ABC transporter F fam 99.7 1.2E-17 2.6E-22 190.2 13.1 155 86-243 528-712 (718)
429 cd03295 ABC_OpuCA_Osmoprotecti 99.7 1.2E-17 2.6E-22 167.6 11.7 118 498-617 20-226 (242)
430 TIGR02769 nickel_nikE nickel i 99.7 1.3E-17 2.9E-22 169.5 12.0 127 498-626 30-250 (265)
431 TIGR01166 cbiO cobalt transpor 99.7 6.1E-18 1.3E-22 163.3 8.8 133 85-219 10-189 (190)
432 cd03296 ABC_CysA_sulfate_impor 99.7 1.3E-17 2.9E-22 167.0 11.5 116 500-617 23-227 (239)
433 PRK13650 cbiO cobalt transport 99.7 1.2E-17 2.7E-22 170.9 11.1 119 497-617 25-230 (279)
434 TIGR03258 PhnT 2-aminoethylpho 99.7 1.3E-17 2.8E-22 175.7 11.3 121 500-622 26-234 (362)
435 cd03218 ABC_YhbG The ABC trans 99.7 1.5E-17 3.2E-22 165.9 11.2 116 499-616 20-222 (232)
436 PRK13540 cytochrome c biogenes 99.7 1.1E-17 2.3E-22 162.9 10.0 142 85-228 19-198 (200)
437 PRK11147 ABC transporter ATPas 99.7 2.4E-17 5.2E-22 187.5 13.6 156 86-243 338-526 (635)
438 TIGR00972 3a0107s01c2 phosphat 99.7 2.4E-17 5.1E-22 166.0 12.1 123 498-622 20-238 (247)
439 PRK13646 cbiO cobalt transport 99.7 1.8E-17 3.9E-22 170.3 11.4 120 496-617 24-236 (286)
440 TIGR02770 nickel_nikD nickel i 99.7 3E-17 6.5E-22 163.4 12.4 126 500-627 7-227 (230)
441 PRK10070 glycine betaine trans 99.7 1.9E-17 4E-22 176.0 11.4 125 500-626 49-265 (400)
442 COG1245 Predicted ATPase, RNas 99.7 1E-17 2.2E-22 171.6 8.9 136 90-230 97-287 (591)
443 PRK15112 antimicrobial peptide 99.7 2.4E-17 5.2E-22 167.8 11.7 130 498-629 32-253 (267)
444 PRK15093 antimicrobial peptide 99.7 2.2E-17 4.7E-22 172.8 11.7 66 559-624 153-256 (330)
445 cd03245 ABCC_bacteriocin_expor 99.7 1.5E-17 3.2E-22 164.5 9.9 113 497-609 22-220 (220)
446 PRK11701 phnK phosphonate C-P 99.7 1.9E-17 4.2E-22 167.7 10.9 127 497-625 24-250 (258)
447 PRK13539 cytochrome c biogenes 99.7 2.6E-17 5.7E-22 161.1 11.2 144 85-231 20-200 (207)
448 COG4674 Uncharacterized ABC-ty 99.7 2.4E-17 5.2E-22 151.4 9.8 161 85-247 23-237 (249)
449 PRK14250 phosphate ABC transpo 99.7 2.4E-17 5.1E-22 165.3 10.8 127 498-626 22-231 (241)
450 cd03224 ABC_TM1139_LivF_branch 99.7 1.3E-17 2.9E-22 165.1 8.9 116 500-616 21-221 (222)
451 TIGR02324 CP_lyasePhnL phospho 99.7 2E-17 4.3E-22 164.1 9.8 144 85-229 26-222 (224)
452 TIGR03005 ectoine_ehuA ectoine 99.7 3.4E-17 7.3E-22 165.4 11.5 117 499-617 20-237 (252)
453 cd03265 ABC_DrrA DrrA is the A 99.7 2.1E-17 4.7E-22 163.3 9.9 113 500-614 21-219 (220)
454 PRK09493 glnQ glutamine ABC tr 99.7 2.7E-17 5.8E-22 164.9 10.5 118 498-617 20-226 (240)
455 cd03221 ABCF_EF-3 ABCF_EF-3 E 99.7 3.5E-17 7.7E-22 150.3 10.4 122 85-233 18-144 (144)
456 PRK10419 nikE nickel transport 99.7 4.3E-17 9.3E-22 165.9 12.0 124 500-626 33-250 (268)
457 TIGR02315 ABC_phnC phosphonate 99.7 2.5E-17 5.5E-22 165.5 10.2 117 497-615 20-234 (243)
458 PRK11144 modC molybdate transp 99.7 2.7E-17 5.9E-22 173.5 10.8 116 501-618 20-220 (352)
459 cd03256 ABC_PhnC_transporter A 99.7 2.9E-17 6.3E-22 164.8 10.4 115 500-616 22-234 (241)
460 PRK13409 putative ATPase RIL; 99.7 2.6E-17 5.7E-22 184.2 11.1 151 86-239 358-536 (590)
461 PRK13637 cbiO cobalt transport 99.7 3.7E-17 8E-22 168.0 11.3 118 497-616 25-234 (287)
462 TIGR02142 modC_ABC molybdenum 99.7 3.1E-17 6.8E-22 173.3 10.9 117 501-619 19-224 (354)
463 COG0444 DppD ABC-type dipeptid 99.7 5.4E-17 1.2E-21 162.2 11.9 69 557-625 146-252 (316)
464 COG1122 CbiO ABC-type cobalt t 99.7 1.9E-17 4.1E-22 162.9 8.4 120 498-617 23-229 (235)
465 cd03250 ABCC_MRP_domain1 Domai 99.7 2.1E-17 4.5E-22 161.5 8.6 107 498-604 24-204 (204)
466 PRK13643 cbiO cobalt transport 99.7 4.1E-17 8.8E-22 167.8 11.2 120 496-617 23-234 (288)
467 PRK13648 cbiO cobalt transport 99.7 4.5E-17 9.6E-22 166.0 11.4 118 498-617 28-232 (269)
468 cd03259 ABC_Carb_Solutes_like 99.7 3E-17 6.5E-22 161.5 9.8 110 498-609 19-213 (213)
469 PRK13642 cbiO cobalt transport 99.7 4E-17 8.7E-22 167.0 11.1 118 498-617 26-230 (277)
470 cd03222 ABC_RNaseL_inhibitor T 99.7 3E-17 6.6E-22 155.3 9.3 128 87-236 19-152 (177)
471 PRK11831 putative ABC transpor 99.7 4.8E-17 1E-21 165.7 11.5 128 500-627 28-244 (269)
472 PRK13644 cbiO cobalt transport 99.7 4.3E-17 9.2E-22 166.5 11.1 120 496-617 19-225 (274)
473 PRK13537 nodulation ABC transp 99.7 4E-17 8.6E-22 169.0 11.0 116 498-617 26-228 (306)
474 cd03236 ABC_RNaseL_inhibitor_d 99.7 2.1E-17 4.7E-22 166.2 8.7 149 86-238 20-220 (255)
475 KOG0065 Pleiotropic drug resis 99.7 7E-16 1.5E-20 176.9 22.0 160 85-245 133-351 (1391)
476 cd03299 ABC_ModC_like Archeal 99.7 5.5E-17 1.2E-21 162.0 11.6 115 501-617 21-220 (235)
477 PRK13633 cobalt transporter AT 99.7 4.6E-17 1E-21 166.8 11.2 118 498-617 29-234 (280)
478 PRK11264 putative amino-acid A 99.7 6.3E-17 1.4E-21 163.3 12.0 128 498-627 22-245 (250)
479 TIGR01288 nodI ATP-binding ABC 99.7 4E-17 8.6E-22 169.2 10.8 116 498-617 23-225 (303)
480 PRK13541 cytochrome c biogenes 99.7 3.1E-17 6.7E-22 159.0 9.3 140 86-227 19-193 (195)
481 COG1101 PhnK ABC-type uncharac 99.7 3.9E-17 8.4E-22 152.5 9.4 155 86-240 25-233 (263)
482 COG1127 Ttg2A ABC-type transpo 99.7 7.7E-17 1.7E-21 153.5 11.3 126 501-627 30-246 (263)
483 PRK14273 phosphate ABC transpo 99.7 6.7E-17 1.4E-21 163.5 11.7 125 498-622 26-244 (254)
484 COG4175 ProV ABC-type proline/ 99.7 6E-17 1.3E-21 159.3 10.7 125 501-627 50-266 (386)
485 TIGR03410 urea_trans_UrtE urea 99.7 2.9E-17 6.3E-22 163.6 8.7 117 499-615 20-220 (230)
486 PRK10619 histidine/lysine/argi 99.7 6.5E-17 1.4E-21 163.8 11.3 115 501-617 27-242 (257)
487 PRK13636 cbiO cobalt transport 99.7 5.7E-17 1.2E-21 166.3 10.9 117 499-617 26-232 (283)
488 PRK10895 lipopolysaccharide AB 99.7 4.7E-17 1E-21 163.3 10.0 118 498-617 22-227 (241)
489 PRK11124 artP arginine transpo 99.7 6.3E-17 1.4E-21 162.5 10.8 116 500-617 23-231 (242)
490 PRK13640 cbiO cobalt transport 99.7 6.4E-17 1.4E-21 165.9 11.0 119 497-617 25-233 (282)
491 TIGR01189 ccmA heme ABC export 99.7 5.8E-17 1.3E-21 157.5 10.1 141 85-228 18-197 (198)
492 PRK13647 cbiO cobalt transport 99.7 5.8E-17 1.3E-21 165.5 10.4 117 497-615 23-226 (274)
493 PRK13632 cbiO cobalt transport 99.7 6.4E-17 1.4E-21 165.0 10.7 119 497-617 27-232 (271)
494 cd03266 ABC_NatA_sodium_export 99.7 4.1E-17 9E-22 161.1 8.8 110 498-609 24-218 (218)
495 PRK14269 phosphate ABC transpo 99.7 1E-16 2.2E-21 161.3 11.7 120 498-617 21-231 (246)
496 PRK13638 cbiO cobalt transport 99.7 8.6E-17 1.9E-21 164.1 11.3 119 497-617 19-226 (271)
497 PRK13546 teichoic acids export 99.7 9.4E-17 2E-21 162.6 11.4 122 500-624 45-239 (264)
498 PRK09536 btuD corrinoid ABC tr 99.7 6.1E-17 1.3E-21 172.2 10.4 122 501-626 25-236 (402)
499 cd03293 ABC_NrtD_SsuB_transpor 99.7 6.1E-17 1.3E-21 160.1 9.7 111 499-611 24-218 (220)
500 cd03214 ABC_Iron-Siderophores_ 99.7 6.1E-17 1.3E-21 154.8 9.3 108 500-609 20-180 (180)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-107 Score=918.86 Aligned_cols=625 Identities=46% Similarity=0.678 Sum_probs=520.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------------------------
Q 047286 1 MAACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP------------------------------------- 43 (632)
Q Consensus 1 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~------------------------------------- 43 (632)
++.+.|++++....+++.+.+.+.+++++++++.++++|++.+
T Consensus 177 ~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~g~~~G~ 256 (1228)
T KOG0055|consen 177 MLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKKGLFKGL 256 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999999921
Q ss_pred ------------------------------------------CCcccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 047286 44 ------------------------------------------LEDMPLGQTSLNVNAFAAGQAAACKMFETIERIPKINP 81 (632)
Q Consensus 44 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 81 (632)
.+.+.+|+..|++..+.+|++|+.+|++++|+.|++++
T Consensus 257 ~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~ 336 (1228)
T KOG0055|consen 257 GLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDP 336 (1228)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcCCCCCCc
Confidence 45678999999999999999999999999999887654
Q ss_pred CCC-------------------------------cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH-------
Q 047286 82 YDN-------------------------------RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA------- 123 (632)
Q Consensus 82 ~~~-------------------------------~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~------- 123 (632)
... .+||+|++|+++||||||||||||++++|. |+|+|..
T Consensus 337 ~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~--RfydP~~G~V~idG 414 (1228)
T KOG0055|consen 337 YSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLA--RFYDPTSGEVLIDG 414 (1228)
T ss_pred ccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHH--HhcCCCCceEEEcC
Confidence 321 199999999999999999999999999999 8888754
Q ss_pred ----------hhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc---------
Q 047286 124 ----------EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV--------- 184 (632)
Q Consensus 124 ----------~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v--------- 184 (632)
+|.+||.|+|+|.+|..++.+ ||.+|+++++.+++.++++.+++++++.++|.|++|.+
T Consensus 415 ~di~~~~~~~lr~~iglV~QePvlF~~tI~e--NI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSG 492 (1228)
T KOG0055|consen 415 EDIRNLNLKWLRSQIGLVSQEPVLFATTIRE--NIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSG 492 (1228)
T ss_pred ccchhcchHHHHhhcCeeeechhhhcccHHH--HHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCCh
Confidence 689999999999999999998 89999999999999999999999999999999999888
Q ss_pred -----------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChh
Q 047286 185 -----------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHD 241 (632)
Q Consensus 185 -----------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~ 241 (632)
+|||||+++++.++++|.+..+|+|+|+|+|+++++++||+|++|++|+|+|.|+|+
T Consensus 493 GQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ 572 (1228)
T KOG0055|consen 493 GQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHD 572 (1228)
T ss_pred HHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecCHH
Confidence 399999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcHHHHHHHHHhhhhhhhc---ccc---cccccccCCCCCCCccccccc--c-cccccC---CchhHhhhhhHH
Q 047286 242 ELIEDPEGAYSQLVRLQEGAKEAQD---KSL---GVKHILRGFPGPIGVYETAER--S-EDRIEK---DPTEIEKRKKVS 309 (632)
Q Consensus 242 el~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~---~~~~~~~~~~~~ 309 (632)
||+..+ +.|.++++.|........ +.. ....+.+.........+.... . ....+. +....+.....+
T Consensus 573 ELi~~~-G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~s 651 (1228)
T KOG0055|consen 573 ELIALG-GIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSEEDEKVS 651 (1228)
T ss_pred HHHhcc-chHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCcccccccccccccccccccccccccccc
Confidence 999985 999999998865443221 000 000000000000000000000 0 000000 000011124567
Q ss_pred HHHHHhhccchhHHHHHHHHHHHH---HHHHHHHHhhhhcc---------------------------------------
Q 047286 310 VTRLAYANRSEVPILLIGSIAAVI---VFPIFGLLLSTSIN--------------------------------------- 347 (632)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~i---~~p~~~~~~~~~~~--------------------------------------- 347 (632)
+++++.+++|+|+++++|++++++ .+|+|++.++.++.
T Consensus 652 ~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f 731 (1228)
T KOG0055|consen 652 FWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFF 731 (1228)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999877 66776655443221
Q ss_pred --------------------------------hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 047286 348 --------------------------------IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLA 394 (632)
Q Consensus 348 --------------------------------~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~ 394 (632)
.|+|.+|+++|+..++..+++.+..+++++..++++++++|+. |+|+
T Consensus 732 ~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~la 811 (1228)
T KOG0055|consen 732 GIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLA 811 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1999999999999999999999999999999999999999988 9999
Q ss_pred HHHHHHHHHHHHHHHHHhH----------HHHHHH---------------------------------------------
Q 047286 395 FITLAVPSLTIAEGYLKKK----------KNYERL--------------------------------------------- 419 (632)
Q Consensus 395 lv~l~~~~l~~~~~~~~~~----------~~~~~~--------------------------------------------- 419 (632)
++++++.|++....+...+ +.+.++
T Consensus 812 lv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~ 891 (1228)
T KOG0055|consen 812 LVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLIS 891 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887765433 000000
Q ss_pred ------------HHHHHHHhhhhHHhhcCCcCHHHHHHHH--HHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCC
Q 047286 420 ------------HINAFCFFIGSKLVEHGDATFGEVFKFL--SEFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKI 485 (632)
Q Consensus 420 ------------~~~~~~~~~g~~~v~~g~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~ 485 (632)
..+++.+|+|++++.+|.+++.+++..+ ..+....+.+..++.|++.++..|+.++|+++|.+|+.
T Consensus 892 gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i 971 (1228)
T KOG0055|consen 892 GLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTI 971 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCC
Confidence 3466789999999999999999999877 34455568888999999999999999999999999987
Q ss_pred CCCCCCCCCCCcccccEEEee-------------------------EEEEEecCCCChHHHHHhhhcCCChhh-------
Q 047286 486 DWSSKDGMTPSTVRGDIVFEH-------------------------TVALVGENGNGKSTVISLAERFHNPEQ------- 533 (632)
Q Consensus 486 ~~~~~~~~~~~~~~g~I~f~~-------------------------~vaIVG~SGsGKSTL~~ll~r~y~~~~------- 533 (632)
+.+++.+..++..+|+|+|+| ++||||||||||||++.||+|||||++
T Consensus 972 ~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg 1051 (1228)
T KOG0055|consen 972 DPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDG 1051 (1228)
T ss_pred CCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECC
Confidence 765434444567889999988 799999999999999999999999943
Q ss_pred --------------------------------------------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHH
Q 047286 534 --------------------------------------------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGL 569 (632)
Q Consensus 534 --------------------------------------------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQ 569 (632)
+..+....|+|+||.+||+||||.|||+|.+|||||
T Consensus 1052 ~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQ 1131 (1228)
T KOG0055|consen 1052 VDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQ 1131 (1228)
T ss_pred cccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchH
Confidence 122223458999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-----------------------------------hccccchhhhhcCCEEEEEeCCeEeeecChHHH
Q 047286 570 KQRIARTRARNY-----------------------------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDAL 614 (632)
Q Consensus 570 rQRiaiARA~~~-----------------------------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL 614 (632)
|||||||||++| |+|||||+||+|||.|+|+++|+|+|+|||+||
T Consensus 1132 KQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L 1211 (1228)
T KOG0055|consen 1132 KQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQGTHDEL 1211 (1228)
T ss_pred HHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEecccHHHH
Confidence 999999999887 899999999999999999999999999999999
Q ss_pred hccCCchhHHHHHhhhc
Q 047286 615 MKITDGTYASLTALHMS 631 (632)
Q Consensus 615 ~~~~~g~y~~l~~~~~~ 631 (632)
+++ +|.|++|+..|..
T Consensus 1212 ~~~-~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1212 LAK-RGIYFRLVQLQSS 1227 (1228)
T ss_pred HhC-CCchHHHhhhccC
Confidence 996 9999999998864
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7.5e-79 Score=734.58 Aligned_cols=627 Identities=25% Similarity=0.361 Sum_probs=441.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++++|+++++..++.+++++..+..++..++++++++|++.|
T Consensus 204 l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~ 283 (1466)
T PTZ00265 204 TCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLH 283 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999943
Q ss_pred ------------------------CC--------cccHH-----------------HHHHHHHHHHHHHHHHHHHHHHhc
Q 047286 44 ------------------------LE--------DMPLG-----------------QTSLNVNAFAAGQAAACKMFETIE 74 (632)
Q Consensus 44 ------------------------~~--------~~~~~-----------------~~~~~~~~~~~~~~a~~ri~~~~~ 74 (632)
.+ .++.| .+.+.+..++++++|++|++++++
T Consensus 284 ~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~ 363 (1466)
T PTZ00265 284 IGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIIN 363 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11 12222 223456789999999999999999
Q ss_pred cCCCCCC---------------------CC--------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC-------
Q 047286 75 RIPKINP---------------------YD--------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF------- 118 (632)
Q Consensus 75 ~~~~~~~---------------------~~--------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~------- 118 (632)
.+++++. +. ..+||+|++||++||+||||||||||+++|.++-.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 443 (1466)
T PTZ00265 364 RKPLVENNDDGKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDII 443 (1466)
T ss_pred CCCCCCCCCCCccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEE
Confidence 8664321 00 01899999999999999999999999999985411
Q ss_pred ---------CCcHHhhcceEEEcccCcccccccccccccccCCC------------------------------------
Q 047286 119 ---------YAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQ------------------------------------ 153 (632)
Q Consensus 119 ---------~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~------------------------------------ 153 (632)
.+...+|++|+||+|+|.+|..++.+ |+.++..
T Consensus 444 i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~e--NI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1466)
T PTZ00265 444 INDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKN--NIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGD 521 (1466)
T ss_pred EeCCcchhhCCHHHHHHhccEecccccchhccHHH--HHHhcCCCccccchhccccccccccccccccccccccccccch
Confidence 01223678899999999999988877 6766521
Q ss_pred ---------------------CCCHHHHHHHHHHccchhhHhhCCccccccc----------------------------
Q 047286 154 ---------------------NASDEHIRPAVQLANAEKSIDKLPLGLDTVV---------------------------- 184 (632)
Q Consensus 154 ---------------------~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v---------------------------- 184 (632)
+.+++++.++++.+++++++..+|.|++|.+
T Consensus 522 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~IL 601 (1466)
T PTZ00265 522 LNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKIL 601 (1466)
T ss_pred hhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 2356788999999999999999999988776
Q ss_pred ----ccCCCCHHHHHHHHHHHHHHh--CCceEEEEecCchHHhhcCeEEEEeCC--------------------------
Q 047286 185 ----ATNAVDAQSERIVQAAMVKLV--TNQTVVIVANCLITIRNADCIIMVSKG-------------------------- 232 (632)
Q Consensus 185 ----~ts~LD~~~~~~i~~~l~~~~--~~~tviiitH~~~~~~~aD~i~vl~~G-------------------------- 232 (632)
+|++||+.+++.+++.|+++. +++|+|+|||+++.++.||+|++|++|
T Consensus 602 lLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~ 681 (1466)
T PTZ00265 602 ILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKN 681 (1466)
T ss_pred EEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccccccccc
Confidence 399999999999999999986 479999999999999999999999986
Q ss_pred ---------------------eEEEecChhHHhcCCCcHHHHHHHHHhhhhhhhc----cc-c----cc-cccccCC---
Q 047286 233 ---------------------KIVEKGTHDELIEDPEGAYSQLVRLQEGAKEAQD----KS-L----GV-KHILRGF--- 278 (632)
Q Consensus 233 ---------------------~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~----~~-~----~~-~~~~~~~--- 278 (632)
+|+|+|+|+||+...++.|..+.+.|........ .. . .. .......
T Consensus 682 ~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (1466)
T PTZ00265 682 NKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPD 761 (1466)
T ss_pred ccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence 5999999999997558899998877643211110 00 0 00 0000000
Q ss_pred --CCC--CCccccc-cccccc--cc-CCchh---H---h------hhhhHHHHHHHhhccchhHHHHHHHHHHHH---HH
Q 047286 279 --PGP--IGVYETA-ERSEDR--IE-KDPTE---I---E------KRKKVSVTRLAYANRSEVPILLIGSIAAVI---VF 335 (632)
Q Consensus 279 --~~~--~~~~~~~-~~~~~~--~~-~~~~~---~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~ 335 (632)
... ....... ...... .. .+... . + ......+.+++.+.+++++.++++++++++ ++
T Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (1466)
T PTZ00265 762 EMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTIIALSILVAGGLY 841 (1466)
T ss_pred cccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000000 000000 00 00000 0 0 000012233333333333333333333221 12
Q ss_pred HHHHHHhhhh----------------------------------------------------------------------
Q 047286 336 PIFGLLLSTS---------------------------------------------------------------------- 345 (632)
Q Consensus 336 p~~~~~~~~~---------------------------------------------------------------------- 345 (632)
|+++++++..
T Consensus 842 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~ 921 (1466)
T PTZ00265 842 PVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDK 921 (1466)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCC
Confidence 2111111000
Q ss_pred cchhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH-----H---H-
Q 047286 346 INIGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK-----K---N- 415 (632)
Q Consensus 346 ~~~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~-----~---~- 415 (632)
...|++++|+++|++.++..+...+..++..++.++++++++++. |.++++++++++++......+.+ + .
T Consensus 922 ~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1466)
T PTZ00265 922 HAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKKE 1001 (1466)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 113999999999999999999999999999999998888888877 99888776655554332211000 0 0
Q ss_pred ----------------HHHH---------------------------------------------------------HHH
Q 047286 416 ----------------YERL---------------------------------------------------------HIN 422 (632)
Q Consensus 416 ----------------~~~~---------------------------------------------------------~~~ 422 (632)
..+. ...
T Consensus 1002 ~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1081 (1466)
T PTZ00265 1002 INQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFIN 1081 (1466)
T ss_pred ccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 123
Q ss_pred HHHHhhhhHHhhcCCcCHHHHHHHHHHHHH--HHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCC---CCc
Q 047286 423 AFCFFIGSKLVEHGDATFGEVFKFLSEFGC--FWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMT---PST 497 (632)
Q Consensus 423 ~~~~~~g~~~v~~g~~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~---~~~ 497 (632)
++++|+|++++..|.+++|++++++..+.. ..+..+....+.++++..+++|++++++.+++.+..+.+... ++.
T Consensus 1082 ~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~ 1161 (1466)
T PTZ00265 1082 SFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKND 1161 (1466)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCC
Confidence 467899999999999999999987733321 235567778889999999999999999887644221111111 112
Q ss_pred ccccEEEee-------------------------EEEEEecCCCChHHHHHhhhcCCChh--------------------
Q 047286 498 VRGDIVFEH-------------------------TVALVGENGNGKSTVISLAERFHNPE-------------------- 532 (632)
Q Consensus 498 ~~g~I~f~~-------------------------~vaIVG~SGsGKSTL~~ll~r~y~~~-------------------- 532 (632)
..|.|+|+| ++|||||||||||||++||+|||+|+
T Consensus 1162 ~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~ 1241 (1466)
T PTZ00265 1162 IKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQD 1241 (1466)
T ss_pred CCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccc
Confidence 335555554 79999999999999999999999982
Q ss_pred ----------------------------------h------------hcHH-----------------------------
Q 047286 533 ----------------------------------Q------------VIYS----------------------------- 537 (632)
Q Consensus 533 ----------------------------------~------------~~~~----------------------------- 537 (632)
+ ++..
T Consensus 1242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~ 1321 (1466)
T PTZ00265 1242 YQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKE 1321 (1466)
T ss_pred cccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCC
Confidence 1 1111
Q ss_pred ----------HHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 538 ----------WIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 538 ----------~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
....+++|||.+||+||||.|||+|.+||||||||||||||+++
T Consensus 1322 ~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L 1401 (1466)
T PTZ00265 1322 DATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTI 1401 (1466)
T ss_pred CCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHH
Confidence 11237789999999999999999999999999999999999766
Q ss_pred -----------hccccchhhhhcCCEEEEEeC----CeEe-eecChHHHhccCCchhHHHHHhhh
Q 047286 582 -----------CGCGSPPYHYKNADITSVVKN----GVIA-EKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 -----------~~iahrl~~~~~aD~I~vl~~----G~iv-e~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
|+||||++++++||+|+||++ |+++ |+|||+||+++++|.|++|++.|.
T Consensus 1402 ~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~~ 1466 (1466)
T PTZ00265 1402 VDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLAK 1466 (1466)
T ss_pred HHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhcC
Confidence 789999999999999999999 9955 899999999833899999998763
No 3
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-74 Score=704.31 Aligned_cols=611 Identities=17% Similarity=0.207 Sum_probs=401.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------------------------------
Q 047286 11 AGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP----------------------------------------------- 43 (632)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----------------------------------------------- 43 (632)
+..++.+++.+..++.++..++..+.+.|.+.|
T Consensus 456 l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~ 535 (1622)
T PLN03130 456 IQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPV 535 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567778888888888889999999999943
Q ss_pred -------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCC-------C------
Q 047286 44 -------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKI-------N------ 80 (632)
Q Consensus 44 -------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~-------~------ 80 (632)
.+.++.|.+ ...+..+.+++++++||.++++.++.. .
T Consensus 536 ~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~~~~~~~~~I 615 (1622)
T PLN03130 536 LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNPPLEPGLPAI 615 (1622)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCCcccCCCCce
Confidence 122333322 233667899999999999999643210 0
Q ss_pred ---------CC--C----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH-----hhcceEEEcccCccccc
Q 047286 81 ---------PY--D----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA-----EQEKIGLVSKEPIFLFC 140 (632)
Q Consensus 81 ---------~~--~----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~-----~r~~i~~v~Q~~~~~~~ 140 (632)
+. . .++||++++|++++|+||||||||||+++|. +.+++.+ ++++++||+|+||+|++
T Consensus 616 ~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLl--G~~~~~~GG~I~l~~~Iayv~Q~p~Lfng 693 (1622)
T PLN03130 616 SIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAML--GELPPRSDASVVIRGTVAYVPQVSWIFNA 693 (1622)
T ss_pred EEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHH--HhhccCCCceEEEcCeEEEEcCccccCCC
Confidence 00 0 1299999999999999999999999999998 4455544 67899999999999999
Q ss_pred ccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCcccccccc--------------------------------cCC
Q 047286 141 DFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVVA--------------------------------TNA 188 (632)
Q Consensus 141 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v~--------------------------------ts~ 188 (632)
|+++ ||.++.+ .++++++++++.|++++++..+|+|++|.++ ||+
T Consensus 694 TIre--NI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSA 770 (1622)
T PLN03130 694 TVRD--NILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSA 770 (1622)
T ss_pred CHHH--HHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccc
Confidence 9999 7999975 5789999999999999999999999999883 899
Q ss_pred CCHHHHHHHH-HHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHHHHhhhhhhhcc
Q 047286 189 VDAQSERIVQ-AAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVRLQEGAKEAQDK 267 (632)
Q Consensus 189 LD~~~~~~i~-~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~ 267 (632)
||+++++.+. ++++...+++|+|+|||+++.++.||+|++|++|+|+++|+++++.+. ++.|..+...+....+....
T Consensus 771 LD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~-~~~~~~l~~~~~~~~~~~~~ 849 (1622)
T PLN03130 771 LDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNN-GPLFQKLMENAGKMEEYVEE 849 (1622)
T ss_pred cCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhc-chhHHHHHHhcccccccccc
Confidence 9999998765 567777788999999999999999999999999999999999999865 56677766543211110000
Q ss_pred cccc--c-ccccCCCC-CCCccccccc-c-ccc-ccCCchhHhhhhhH--HHHHHHhhccchh--HHHHHHHHHHHH---
Q 047286 268 SLGV--K-HILRGFPG-PIGVYETAER-S-EDR-IEKDPTEIEKRKKV--SVTRLAYANRSEV--PILLIGSIAAVI--- 333 (632)
Q Consensus 268 ~~~~--~-~~~~~~~~-~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~i--- 333 (632)
.... . ........ .......... . .+. ......+.+++..+ ++..+.+|.+... +++.+.+++.++
T Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~ 929 (1622)
T PLN03130 850 NGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEV 929 (1622)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 0000 0 00000000 0000000000 0 000 00001112222222 3333433332211 111111111000
Q ss_pred ---HHHH----------------------HH--------------HHhh--------------------------hhcch
Q 047286 334 ---VFPI----------------------FG--------------LLLS--------------------------TSINI 348 (632)
Q Consensus 334 ---~~p~----------------------~~--------------~~~~--------------------------~~~~~ 348 (632)
..++ +. +++. ...+.
T Consensus 930 ~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~ 1009 (1622)
T PLN03130 930 FRVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPL 1009 (1622)
T ss_pred HHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCc
Confidence 0000 00 0000 00123
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---HHHHHHhHHHHHHH-----
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTI---AEGYLKKKKNYERL----- 419 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~---~~~~~~~~~~~~~~----- 419 (632)
|++++|+++|++.++..++..+..++..++.+++.++++++. | +.++.+..+++++ ...|.+..+..++.
T Consensus 1010 G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~-~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~ 1088 (1622)
T PLN03130 1010 GRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVST-ISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITR 1088 (1622)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999888888777766554 4 2222221122111 11121111000000
Q ss_pred --------------------------------------------------------HHHHHHHhhh-hHHhhcCC-----
Q 047286 420 --------------------------------------------------------HINAFCFFIG-SKLVEHGD----- 437 (632)
Q Consensus 420 --------------------------------------------------------~~~~~~~~~g-~~~v~~g~----- 437 (632)
...+++++++ ...+..+.
T Consensus 1089 s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~ 1168 (1622)
T PLN03130 1089 SPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQ 1168 (1622)
T ss_pred chHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 0001111222 22233221
Q ss_pred ----cCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCC--cccccEEEee-----
Q 047286 438 ----ATFGEVFKFLSEFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPS--TVRGDIVFEH----- 506 (632)
Q Consensus 438 ----~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~--~~~g~I~f~~----- 506 (632)
.++|.++.+..... ..+..........+..+.+++|+.++++.++|.++...+..+++ +.+|.|+|+|
T Consensus 1169 ~~~~~~~G~~ls~~~~~~-~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y 1247 (1622)
T PLN03130 1169 AAFASTMGLLLSYALNIT-SLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRY 1247 (1622)
T ss_pred hhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEe
Confidence 23343443321111 11222333444667889999999999988776532111111111 2346677665
Q ss_pred -------------------EEEEEecCCCChHHHHHhhhcCCChhh----------------------------------
Q 047286 507 -------------------TVALVGENGNGKSTVISLAERFHNPEQ---------------------------------- 533 (632)
Q Consensus 507 -------------------~vaIVG~SGsGKSTL~~ll~r~y~~~~---------------------------------- 533 (632)
+||||||||||||||+++|+|+|+|++
T Consensus 1248 ~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~G 1327 (1622)
T PLN03130 1248 RPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSG 1327 (1622)
T ss_pred CCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccc
Confidence 799999999999999999999999843
Q ss_pred ----------------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------
Q 047286 534 ----------------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------- 581 (632)
Q Consensus 534 ----------------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------- 581 (632)
+|.+....++++||.++|+||||.|||+|.+||||||||||||||+++
T Consensus 1328 TIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~ 1407 (1622)
T PLN03130 1328 TVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDV 1407 (1622)
T ss_pred cHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCH
Confidence 222333447889999999999999999999999999999999999877
Q ss_pred -------------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhh
Q 047286 582 -------------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 582 -------------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~ 629 (632)
|+||||++|+++||+|+||++|+|+|.|+|+||+++++|.|++|++.+
T Consensus 1408 ~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~ 1474 (1622)
T PLN03130 1408 RTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQST 1474 (1622)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHc
Confidence 799999999999999999999999999999999986569999999764
No 4
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-74 Score=667.94 Aligned_cols=567 Identities=21% Similarity=0.265 Sum_probs=382.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCC---------CC----------------C-----CcEEEEeeCCCEEEEEcCCCc
Q 047286 55 NVNAFAAGQAAACKMFETIERIPKIN---------PY----------------D-----NRFLQHVPSGTTVALVGQSGS 104 (632)
Q Consensus 55 ~~~~~~~~~~a~~ri~~~~~~~~~~~---------~~----------------~-----~~~~~~i~~Ge~~~ivG~sGs 104 (632)
.+..+.++.++.+|+.+++..+.... +. + +++||+|++|+.+|||||.||
T Consensus 479 ~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGs 558 (1381)
T KOG0054|consen 479 VISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGS 558 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCC
Confidence 46678899999999999996543110 00 0 129999999999999999999
Q ss_pred hHHHHHHHHHhCCCC--CcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccc
Q 047286 105 GKSTVINLVESFRFY--APEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDT 182 (632)
Q Consensus 105 GKSTLl~ll~~~~~~--~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~ 182 (632)
|||+|+..|.|-... +....++.++||||+||++++|+++ ||.||.+ .++++++++++.|+++++++.||.|+.|
T Consensus 559 GKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvre--NILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~T 635 (1381)
T KOG0054|consen 559 GKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVRE--NILFGSP-YDEERYDKVIKACALKKDLEILPFGDLT 635 (1381)
T ss_pred CHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHHH--hhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcc
Confidence 999999999753222 1223567899999999999999999 8999965 7899999999999999999999999999
Q ss_pred ccc--------------------------------cCCCCHHHHHH-HHHHHHHHhCCceEEEEecCchHHhhcCeEEEE
Q 047286 183 VVA--------------------------------TNAVDAQSERI-VQAAMVKLVTNQTVVIVANCLITIRNADCIIMV 229 (632)
Q Consensus 183 ~v~--------------------------------ts~LD~~~~~~-i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl 229 (632)
.|+ .||+|.++.++ +.++|+.+.++||+|+|||.++.+++||.|++|
T Consensus 636 eIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl 715 (1381)
T KOG0054|consen 636 EIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVL 715 (1381)
T ss_pred eecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEe
Confidence 884 78999997765 567887778899999999999999999999999
Q ss_pred eCCeEEEecChhHHhcCCCcHHHHHHHHHhhhhhhhccccccc--ccccCCCC-CCCccc-cccc-ccccc-cCCchhHh
Q 047286 230 SKGKIVEKGTHDELIEDPEGAYSQLVRLQEGAKEAQDKSLGVK--HILRGFPG-PIGVYE-TAER-SEDRI-EKDPTEIE 303 (632)
Q Consensus 230 ~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~-~~~~-~~~~~-~~~~~~~~ 303 (632)
++|+|.+.|+++|+.+. ...+.++......+.+......... ...+.... ...... ..+. .+... +++....+
T Consensus 716 ~~G~I~~~Gty~el~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 794 (1381)
T KOG0054|consen 716 KDGKIVESGTYEELLKS-GGDFAELAHEEESEQEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEE 794 (1381)
T ss_pred cCCeEecccCHHHHHhc-chhHHHHhhccchhhccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHH
Confidence 99999999999999865 5666666322221111110000000 00000000 000000 0000 00000 01111222
Q ss_pred hhhhH--HHHHHHhhccchhHHHHHHH-HHHH-----------------------------------------------H
Q 047286 304 KRKKV--SVTRLAYANRSEVPILLIGS-IAAV-----------------------------------------------I 333 (632)
Q Consensus 304 ~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-----------------------------------------------i 333 (632)
++..+ ++..|..|.+....++...+ ++.. +
T Consensus 795 e~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~ 874 (1381)
T KOG0054|consen 795 ERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLL 874 (1381)
T ss_pred HHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHH
Confidence 23333 23333333322111111000 0000 0
Q ss_pred -H---HHH--HHHHhh-------------------hhcchhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047286 334 -V---FPI--FGLLLS-------------------TSINIGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAF 388 (632)
Q Consensus 334 -~---~p~--~~~~~~-------------------~~~~~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 388 (632)
+ +.+ .++-.+ ...+.|+|+|||++|++.+|..+|..+..+++.++.+++.++++.
T Consensus 875 ~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~ 954 (1381)
T KOG0054|consen 875 TLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVIS 954 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 0 000 000000 012349999999999999999999999999999999988887776
Q ss_pred HH-HHHHHHHH--HHHHHHHHHHHHHhHHHHHHH----------------------------------------------
Q 047286 389 TA-WKLAFITL--AVPSLTIAEGYLKKKKNYERL---------------------------------------------- 419 (632)
Q Consensus 389 ~~-~~l~lv~l--~~~~l~~~~~~~~~~~~~~~~---------------------------------------------- 419 (632)
+. |.+.++.+ .++.+.+..+|....+..+|+
T Consensus 955 ~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~ 1034 (1381)
T KOG0054|consen 955 YVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAF 1034 (1381)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHH
Confidence 55 44333332 333333444455554444443
Q ss_pred ----------------HHHHHHHhhhhHHhh-cCC-cCHHH-----HHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHH
Q 047286 420 ----------------HINAFCFFIGSKLVE-HGD-ATFGE-----VFKFLSEFGCFWCLESTAVAPNADKAKGSAASIF 476 (632)
Q Consensus 420 ----------------~~~~~~~~~g~~~v~-~g~-~s~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~ 476 (632)
.+..+++..+...+. .+. .+.|. .++........|..+. ..+.+..+.|+||+.
T Consensus 1035 f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~---~~elEn~m~SVERv~ 1111 (1381)
T KOG0054|consen 1035 FLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQ---SSELENNMVSVERVL 1111 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHH---HHHHHhcchhhhHHH
Confidence 000011111111111 111 22222 2222222232333333 336677789999999
Q ss_pred HHHccCCCCCCCCCCCCCCC--cccccEEEee------------------------EEEEEecCCCChHHHHHhhhcCCC
Q 047286 477 EILESKPKIDWSSKDGMTPS--TVRGDIVFEH------------------------TVALVGENGNGKSTVISLAERFHN 530 (632)
Q Consensus 477 ~~l~~~~~~~~~~~~~~~~~--~~~g~I~f~~------------------------~vaIVG~SGsGKSTL~~ll~r~y~ 530 (632)
+|.+.|+|.+|..+...+|+ |.+|+|+|+| +||||||||||||||++.|+|+.+
T Consensus 1112 eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e 1191 (1381)
T KOG0054|consen 1112 EYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE 1191 (1381)
T ss_pred HHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC
Confidence 99998877444432222333 3468899988 899999999999999999999977
Q ss_pred h--------------------------------------------------hhhcHHHHHHHHHHHHhcCCCccCccccc
Q 047286 531 P--------------------------------------------------EQVIYSWIIIKCTNFIASLPQGSDLNVGE 560 (632)
Q Consensus 531 ~--------------------------------------------------~~~~~~~~~~~~~~~i~~lp~g~dt~vge 560 (632)
| +++|.+....+++++|.++|+|+|+.|.|
T Consensus 1192 ~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~e 1271 (1381)
T KOG0054|consen 1192 PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSE 1271 (1381)
T ss_pred ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecC
Confidence 6 33777777889999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHhh-----------------------------------hccccchhhhhcCCEEEEEeCCeE
Q 047286 561 RGLQLSGGLKQRIARTRARNY-----------------------------------CGCGSPPYHYKNADITSVVKNGVI 605 (632)
Q Consensus 561 ~G~~LSgGQrQRiaiARA~~~-----------------------------------~~iahrl~~~~~aD~I~vl~~G~i 605 (632)
+|.|||.||||++|||||++| ++||||++|+.|||||+|||+|+|
T Consensus 1272 gG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v 1351 (1381)
T KOG0054|consen 1272 GGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRV 1351 (1381)
T ss_pred CCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeE
Confidence 999999999999999999888 799999999999999999999999
Q ss_pred eeecChHHHhccCCchhHHHHHh
Q 047286 606 AEKGRHDALMKITDGTYASLTAL 628 (632)
Q Consensus 606 ve~G~h~eL~~~~~g~y~~l~~~ 628 (632)
+|.|++++|++++++.|++++..
T Consensus 1352 ~EfdsP~~Ll~~~~S~f~~~l~~ 1374 (1381)
T KOG0054|consen 1352 VEFDSPAELLSDKDSLFSSLLKE 1374 (1381)
T ss_pred eecCChHHHHhCCcchHHHHHHH
Confidence 99999999998878888766543
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-73 Score=695.97 Aligned_cols=612 Identities=19% Similarity=0.208 Sum_probs=399.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------------------------------------------
Q 047286 12 GGITATVVAKLSCRGQIAYAEAEMLLSTQLEP------------------------------------------------ 43 (632)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~------------------------------------------------ 43 (632)
..++++++.+..++.++..++..+.+.|.++|
T Consensus 457 ~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~ 536 (1495)
T PLN03232 457 QTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVV 536 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45577888888899999999999999999943
Q ss_pred ------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCC--------------
Q 047286 44 ------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKIN-------------- 80 (632)
Q Consensus 44 ------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~-------------- 80 (632)
.+.++.|.+ ...+..+.++++|++|+.++++.+++..
T Consensus 537 ~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~~~~~~~~~I~ 616 (1495)
T PLN03232 537 VTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNPPLQPGAPAIS 616 (1495)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccCCcCCCCCcEE
Confidence 122333332 2335678999999999999997543210
Q ss_pred --------CC--C----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH-----hhcceEEEcccCcccccc
Q 047286 81 --------PY--D----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA-----EQEKIGLVSKEPIFLFCD 141 (632)
Q Consensus 81 --------~~--~----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~-----~r~~i~~v~Q~~~~~~~~ 141 (632)
+. + .++||+|++|+.++|+||||||||||+++|. ++++|.+ +|++++||+|+|++|++|
T Consensus 617 ~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLl--G~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gT 694 (1495)
T PLN03232 617 IKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAML--GELSHAETSSVVIRGSVAYVPQVSWIFNAT 694 (1495)
T ss_pred EEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHh--CCCcccCCCEEEecCcEEEEcCcccccccc
Confidence 00 0 1289999999999999999999999999998 5555542 578899999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHccchhhHhhCCcccccccc--------------------------------cCCC
Q 047286 142 FNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVVA--------------------------------TNAV 189 (632)
Q Consensus 142 ~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v~--------------------------------ts~L 189 (632)
+++ ||.++.+ .++++++++++.|++++++..+|+|++|.|+ ||+|
T Consensus 695 Ire--NI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaL 771 (1495)
T PLN03232 695 VRE--NILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSAL 771 (1495)
T ss_pred HHH--HhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCcccc
Confidence 999 7999974 6889999999999999999999999999882 8999
Q ss_pred CHHHHHHHHH-HHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHHHHhhhhhhhccc
Q 047286 190 DAQSERIVQA-AMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVRLQEGAKEAQDKS 268 (632)
Q Consensus 190 D~~~~~~i~~-~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (632)
|+++++.+.+ ++....+++|+|+|||+++.++.||+|++|++|+|+++|+++|+.+. ++.|.++...+....+.....
T Consensus 772 D~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~-~~~~~~l~~~~~~~~~~~~~~ 850 (1495)
T PLN03232 772 DAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS-GSLFKKLMENAGKMDATQEVN 850 (1495)
T ss_pred CHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-chhHHHHHHhccccccccccc
Confidence 9999987754 56666678999999999999999999999999999999999999865 567777765443211110000
Q ss_pred ccccccccCCCCC-CCcccc-cccccccc--cCCchhHhhhh--hHHHHHHHhhccchh--HHHHHHHHHHHH-----HH
Q 047286 269 LGVKHILRGFPGP-IGVYET-AERSEDRI--EKDPTEIEKRK--KVSVTRLAYANRSEV--PILLIGSIAAVI-----VF 335 (632)
Q Consensus 269 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~i-----~~ 335 (632)
....+........ ....+. .....+.. +....+.+++. ..++..+.+|.+..+ +++.+.+++.++ .+
T Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1495)
T PLN03232 851 TNDENILKLGPTVTIDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVS 930 (1495)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000 000000 00000000 00001112222 223444444443321 111111111000 00
Q ss_pred H--H-----------------H-H-----------------HHhh----------------h----------hcchhhHH
Q 047286 336 P--I-----------------F-G-----------------LLLS----------------T----------SINIGAVG 352 (632)
Q Consensus 336 p--~-----------------~-~-----------------~~~~----------------~----------~~~~G~l~ 352 (632)
+ + + . +++. . ..+.|+++
T Consensus 931 ~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~il 1010 (1495)
T PLN03232 931 SSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVI 1010 (1495)
T ss_pred HHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHH
Confidence 0 0 0 0 0000 0 01239999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhHHHHHHH----------
Q 047286 353 ARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTAWKLAFITLAVPSLT---IAEGYLKKKKNYERL---------- 419 (632)
Q Consensus 353 srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~lv~l~~~~l~---~~~~~~~~~~~~~~~---------- 419 (632)
+|+++|++.+++.++..+..++..++.+++++++++....+.++.+..+++. +...+....+..++.
T Consensus 1011 nr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~ 1090 (1495)
T PLN03232 1011 NRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYA 1090 (1495)
T ss_pred HHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH
Confidence 9999999999999999999888888877777666554422222221111111 111121111100000
Q ss_pred ------------------------------------H---------------HHHHHHhh-hhHHhh-cCCcC----HHH
Q 047286 420 ------------------------------------H---------------INAFCFFI-GSKLVE-HGDAT----FGE 442 (632)
Q Consensus 420 ------------------------------------~---------------~~~~~~~~-g~~~v~-~g~~s----~~~ 442 (632)
. ..++++++ +...+. .+.+. +..
T Consensus 1091 ~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 1170 (1495)
T PLN03232 1091 QFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLRNGNAENQAGFAS 1170 (1495)
T ss_pred HHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchH
Confidence 0 00111122 222222 22211 111
Q ss_pred HHH-HHHH--HHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCC--cccccEEEee-----------
Q 047286 443 VFK-FLSE--FGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPS--TVRGDIVFEH----------- 506 (632)
Q Consensus 443 ~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~--~~~g~I~f~~----------- 506 (632)
.+. ++.. .....+........+.+.++.+.+|+.++++.+++.++...+..+++ +..|+|+|+|
T Consensus 1171 ~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~ 1250 (1495)
T PLN03232 1171 TMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPP 1250 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCc
Confidence 111 1111 11112334444555777889999999999988776432111111111 2345666665
Q ss_pred -------------EEEEEecCCCChHHHHHhhhcCCChhh----------------------------------------
Q 047286 507 -------------TVALVGENGNGKSTVISLAERFHNPEQ---------------------------------------- 533 (632)
Q Consensus 507 -------------~vaIVG~SGsGKSTL~~ll~r~y~~~~---------------------------------------- 533 (632)
++|||||||||||||+++|+|+|+|++
T Consensus 1251 vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL 1330 (1495)
T PLN03232 1251 VLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNI 1330 (1495)
T ss_pred ccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHc
Confidence 899999999999999999999999843
Q ss_pred ----------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 534 ----------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 534 ----------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
++.+....++++||.++|+||||.|||+|.+||||||||||||||+++
T Consensus 1331 ~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~I 1410 (1495)
T PLN03232 1331 DPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLI 1410 (1495)
T ss_pred CCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHH
Confidence 222223447789999999999999999999999999999999999877
Q ss_pred -------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhh
Q 047286 582 -------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 582 -------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~ 629 (632)
|+||||++|+++||+|+||++|+|+|.|+|+||+++++|.|++|++.+
T Consensus 1411 q~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~ 1471 (1495)
T PLN03232 1411 QRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHST 1471 (1495)
T ss_pred HHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 899999999999999999999999999999999987346999999865
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.4e-71 Score=676.54 Aligned_cols=618 Identities=18% Similarity=0.234 Sum_probs=411.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------------------------
Q 047286 5 LPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP----------------------------------------- 43 (632)
Q Consensus 5 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----------------------------------------- 43 (632)
+++++.+..++.+++.+..++.++..++-.+.+.|.++|
T Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~ 546 (1522)
T TIGR00957 467 MVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFT 546 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555566778888888888899999999999999943
Q ss_pred ------------------C---CcccHH-----------------HHHHHHHHHHHHHHHHHHHHHHhccCCCCC-----
Q 047286 44 ------------------L---EDMPLG-----------------QTSLNVNAFAAGQAAACKMFETIERIPKIN----- 80 (632)
Q Consensus 44 ------------------~---~~~~~~-----------------~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~----- 80 (632)
. +.++.+ ++...+..++++++|.+||.++++.+++..
T Consensus 547 ~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~ 626 (1522)
T TIGR00957 547 WVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIER 626 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccc
Confidence 0 011111 122345678999999999999996532110
Q ss_pred ----CC----------------C-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEE
Q 047286 81 ----PY----------------D-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLV 131 (632)
Q Consensus 81 ----~~----------------~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v 131 (632)
+. . +++||++++|++++|+||||||||||+++|.| .++|.+ ...+++||
T Consensus 627 ~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g--~~~~~~G~i~~~g~i~yv 704 (1522)
T TIGR00957 627 RTIKPGEGNSITVHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLA--EMDKVEGHVHMKGSVAYV 704 (1522)
T ss_pred cccCCCCCCcEEEEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhC--CCccCCcEEEECCEEEEE
Confidence 00 0 12899999999999999999999999999984 444432 33579999
Q ss_pred cccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc---------------------------
Q 047286 132 SKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV--------------------------- 184 (632)
Q Consensus 132 ~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v--------------------------- 184 (632)
+|+|+++++++++ |+.++.+ .++++++++++.|++.+++..+|.|++|.+
T Consensus 705 ~Q~~~l~~~Ti~e--NI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~i 781 (1522)
T TIGR00957 705 PQQAWIQNDSLRE--NILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADI 781 (1522)
T ss_pred cCCccccCCcHHH--HhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999988 7888754 467788889999999999999998887766
Q ss_pred -----ccCCCCHHHHHHHHHHHHH---HhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHH
Q 047286 185 -----ATNAVDAQSERIVQAAMVK---LVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVR 256 (632)
Q Consensus 185 -----~ts~LD~~~~~~i~~~l~~---~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~ 256 (632)
+|++||+++++.+.+.+.+ +.+++|+|++||+++.+..||+|++|++|++++.|+++++.+. ++.|.++..
T Consensus 782 llLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~~~~l~~ 860 (1522)
T TIGR00957 782 YLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQR-DGAFAEFLR 860 (1522)
T ss_pred EEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhc-chhHHHHHH
Confidence 2899999999999998864 3467999999999999999999999999999999999999865 456666654
Q ss_pred HHhhhhhhh--cc-------cccccc-------cc-----cCCCCC---CCccccc------cc---cccccc---CCch
Q 047286 257 LQEGAKEAQ--DK-------SLGVKH-------IL-----RGFPGP---IGVYETA------ER---SEDRIE---KDPT 300 (632)
Q Consensus 257 ~~~~~~~~~--~~-------~~~~~~-------~~-----~~~~~~---~~~~~~~------~~---~~~~~~---~~~~ 300 (632)
.+....+.. .. ...... .. ...... ....... .. ...... ....
T Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1522)
T TIGR00957 861 TYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLM 940 (1522)
T ss_pred hhccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhH
Confidence 332111000 00 000000 00 000000 0000000 00 000000 0011
Q ss_pred hHhhhhhH--HHHHHHhhccchhHHHH-HHHHHHHH------HHH------------------------HH---------
Q 047286 301 EIEKRKKV--SVTRLAYANRSEVPILL-IGSIAAVI------VFP------------------------IF--------- 338 (632)
Q Consensus 301 ~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~i------~~p------------------------~~--------- 338 (632)
..+.+..+ ++..+.+|.+...++.. +.+++.++ ..+ ++
T Consensus 941 ~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~ 1020 (1522)
T TIGR00957 941 EADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGF 1020 (1522)
T ss_pred HHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHH
Confidence 12222222 23333333322111110 00000000 000 00
Q ss_pred -----HHHhh----------------h----------hcchhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047286 339 -----GLLLS----------------T----------SINIGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIA 387 (632)
Q Consensus 339 -----~~~~~----------------~----------~~~~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 387 (632)
.+++. . ..+.|++++|+++|++.++..++..+..++..++.+++.++++
T Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~ 1100 (1522)
T TIGR00957 1021 AVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVI 1100 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 0123999999999999999999999999999999988888877
Q ss_pred HHH-HHHHHHHHHHHHHHHHH--HHHHhHHHHHHH---------------------------------------------
Q 047286 388 FTA-WKLAFITLAVPSLTIAE--GYLKKKKNYERL--------------------------------------------- 419 (632)
Q Consensus 388 ~~~-~~l~lv~l~~~~l~~~~--~~~~~~~~~~~~--------------------------------------------- 419 (632)
++. |.+++++++++++++.. .|.+..+..++.
T Consensus 1101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~ 1180 (1522)
T TIGR00957 1101 LLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKA 1180 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 766 44443333333322221 121111100000
Q ss_pred -----------------HHHHHHHhhhhHHhh-cCCcCHHHHHHHHHHH--HHHHHHHHHhHHhHHHHHHHHHHHHHHHH
Q 047286 420 -----------------HINAFCFFIGSKLVE-HGDATFGEVFKFLSEF--GCFWCLESTAVAPNADKAKGSAASIFEIL 479 (632)
Q Consensus 420 -----------------~~~~~~~~~g~~~v~-~g~~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ri~~~l 479 (632)
....++++.+...+. .|.++.|.+.+++... ...++........+++.++.+++|+.+++
T Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~ 1260 (1522)
T TIGR00957 1181 YYPSIVANRWLAVRLECVGNCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYS 1260 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 001122333444443 5778898877666332 22345566667778889999999999999
Q ss_pred ccCCCCCCCCCCCCCCC--cccccEEEee------------------------EEEEEecCCCChHHHHHhhhcCCChhh
Q 047286 480 ESKPKIDWSSKDGMTPS--TVRGDIVFEH------------------------TVALVGENGNGKSTVISLAERFHNPEQ 533 (632)
Q Consensus 480 ~~~~~~~~~~~~~~~~~--~~~g~I~f~~------------------------~vaIVG~SGsGKSTL~~ll~r~y~~~~ 533 (632)
+.+++.++...+..+++ +.+|+|+|+| ++|||||||||||||+++|+|+|+|++
T Consensus 1261 ~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~ 1340 (1522)
T TIGR00957 1261 ETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAE 1340 (1522)
T ss_pred cCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCC
Confidence 87766432111111111 2345666665 899999999999999999999999843
Q ss_pred --------------------------------------------------hcHHHHHHHHHHHHhcCCCccCcccccCCC
Q 047286 534 --------------------------------------------------VIYSWIIIKCTNFIASLPQGSDLNVGERGL 563 (632)
Q Consensus 534 --------------------------------------------------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~ 563 (632)
+|.+....++++||.++|+||||.|||+|.
T Consensus 1341 G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~ 1420 (1522)
T TIGR00957 1341 GEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGE 1420 (1522)
T ss_pred CeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCC
Confidence 222333447889999999999999999999
Q ss_pred CCChHHHHHHHHHHHHhh-----------------------------------hccccchhhhhcCCEEEEEeCCeEeee
Q 047286 564 QLSGGLKQRIARTRARNY-----------------------------------CGCGSPPYHYKNADITSVVKNGVIAEK 608 (632)
Q Consensus 564 ~LSgGQrQRiaiARA~~~-----------------------------------~~iahrl~~~~~aD~I~vl~~G~ive~ 608 (632)
+||||||||||||||+++ |+||||++|+++||+|+|||+|+|+|.
T Consensus 1421 ~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~ 1500 (1522)
T TIGR00957 1421 NLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEF 1500 (1522)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEE
Confidence 999999999999999877 899999999999999999999999999
Q ss_pred cChHHHhccCCchhHHHHHhh
Q 047286 609 GRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 609 G~h~eL~~~~~g~y~~l~~~~ 629 (632)
|+|+||+++ +|.|++|++..
T Consensus 1501 G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1501 GAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred CCHHHHHhC-CCHHHHHHHHc
Confidence 999999997 89999999763
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.8e-66 Score=630.44 Aligned_cols=537 Identities=17% Similarity=0.195 Sum_probs=341.4
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEEcccCcccccccccccccccCCCCCCHHHHH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIR 161 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 161 (632)
+||+|++|++++|+||||||||||+++|.|. ++|.+ .+++++|++|+|+++.+++.+ |+.++.+ .+.+++.
T Consensus 679 isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~--~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~e--nI~~~~~-~~~~~~~ 753 (1560)
T PTZ00243 679 VSVSVPRGKLTVVLGATGSGKSTLLQSLLSQ--FEISEGRVWAERSIAYVPQQAWIMNATVRG--NILFFDE-EDAARLA 753 (1560)
T ss_pred eEEEECCCCEEEEECCCCCcHHHHHHHHhcC--CCCCCcEEEECCeEEEEeCCCccCCCcHHH--HHHcCCh-hhHHHHH
Confidence 7899999999999999999999999999854 33322 356799999999999888887 7887643 3456778
Q ss_pred HHHHHccchhhHhhCCccccccc--------------------------------ccCCCCHHHHHHHHH-HHHHHhCCc
Q 047286 162 PAVQLANAEKSIDKLPLGLDTVV--------------------------------ATNAVDAQSERIVQA-AMVKLVTNQ 208 (632)
Q Consensus 162 ~~~~~~~l~~~i~~l~~g~~~~v--------------------------------~ts~LD~~~~~~i~~-~l~~~~~~~ 208 (632)
++++.|+++++++.+|+|+++.+ +|++||+++++.+.+ ++....+++
T Consensus 754 ~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~ 833 (1560)
T PTZ00243 754 DAVRVSQLEADLAQLGGGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGK 833 (1560)
T ss_pred HHHHHhhhHHHHHHhhccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCC
Confidence 88888888888888887776554 289999998887765 444445689
Q ss_pred eEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHHHHhhhhhh-h--ccccc-ccccccCC--C-CC
Q 047286 209 TVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVRLQEGAKEA-Q--DKSLG-VKHILRGF--P-GP 281 (632)
Q Consensus 209 tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~-~--~~~~~-~~~~~~~~--~-~~ 281 (632)
|+|++||+++.+..||+|++|++|+++++|+++++.+. +.|..+........+. . ..... ..+..... . ..
T Consensus 834 TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1560)
T PTZ00243 834 TRVLATHQVHVVPRADYVVALGDGRVEFSGSSADFMRT--SLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEP 911 (1560)
T ss_pred EEEEEeCCHHHHHhCCEEEEEECCEEEEecCHHHHHhC--hHHHHHHHhhcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999764 3455554332111100 0 00000 00000000 0 00
Q ss_pred CCccccc--cccc----ccccCCchhHhhhhhH--HHHHHHhhccchh---HHHHHHH--HHH-H---------------
Q 047286 282 IGVYETA--ERSE----DRIEKDPTEIEKRKKV--SVTRLAYANRSEV---PILLIGS--IAA-V--------------- 332 (632)
Q Consensus 282 ~~~~~~~--~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~--~~~-~--------------- 332 (632)
....+.. .... +.........+++..+ ++..+.+|.+... ..+.+.+ +++ +
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~ 991 (1560)
T PTZ00243 912 PVAKQEGNAEGGDGAALDAAAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTR 991 (1560)
T ss_pred cccccccccccccccccccccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0000000 0000 0000001112222212 3333333322211 1110000 000 0
Q ss_pred ----------------H----HHHHHHHH----hh-------------h----------hcchhhHHHHHhhhHHHHHHH
Q 047286 333 ----------------I----VFPIFGLL----LS-------------T----------SINIGAVGARLSTDASAVRSV 365 (632)
Q Consensus 333 ----------------i----~~p~~~~~----~~-------------~----------~~~~G~l~srls~D~~~i~~~ 365 (632)
. +..++..+ .. . ..+.|+++|||++|++.+++.
T Consensus 992 ~~~~~~~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~ 1071 (1560)
T PTZ00243 992 SFKLSAATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNT 1071 (1560)
T ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHH
Confidence 0 00000000 00 0 012399999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH--HHHHHhHHHHHHH-----------------------
Q 047286 366 VGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIA--EGYLKKKKNYERL----------------------- 419 (632)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~--~~~~~~~~~~~~~----------------------- 419 (632)
++..+..++..++.+++.++++++. |.+.++++.+..+++. ..|....+..++.
T Consensus 1072 l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIr 1151 (1560)
T PTZ00243 1072 LPMSYLYLLQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATIT 1151 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHH
Confidence 9999999999998888888877766 5333322222111111 1111111110000
Q ss_pred ------------------------------------------HHHHHHHhhhhH--HhhcCCcCHHHHHHHHH--HHHHH
Q 047286 420 ------------------------------------------HINAFCFFIGSK--LVEHGDATFGEVFKFLS--EFGCF 453 (632)
Q Consensus 420 ------------------------------------------~~~~~~~~~g~~--~v~~g~~s~~~~~~~~~--~~~~~ 453 (632)
.....+.+++.. ....+.+++|.+..++. .....
T Consensus 1152 af~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~ 1231 (1560)
T PTZ00243 1152 AYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTA 1231 (1560)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence 000011112222 22234466775544442 22223
Q ss_pred HHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCC-------------------------CCCC----CCCcccccEEE
Q 047286 454 WCLESTAVAPNADKAKGSAASIFEILESKPKIDWSS-------------------------KDGM----TPSTVRGDIVF 504 (632)
Q Consensus 454 ~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~-------------------------~~~~----~~~~~~g~I~f 504 (632)
.+..+.....+++.++.+.+|+.++++..++.+.+. +... +..+..|.|+|
T Consensus 1232 ~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f 1311 (1560)
T PTZ00243 1232 TLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVF 1311 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEE
Confidence 345556666788899999999999996443221000 0000 00113466777
Q ss_pred ee------------------------EEEEEecCCCChHHHHHhhhcCCChhh---------------------------
Q 047286 505 EH------------------------TVALVGENGNGKSTVISLAERFHNPEQ--------------------------- 533 (632)
Q Consensus 505 ~~------------------------~vaIVG~SGsGKSTL~~ll~r~y~~~~--------------------------- 533 (632)
+| +||||||||||||||+++|+|+|+|++
T Consensus 1312 ~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQ 1391 (1560)
T PTZ00243 1312 EGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQ 1391 (1560)
T ss_pred EEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECC
Confidence 76 799999999999999999999999843
Q ss_pred -----------------------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------
Q 047286 534 -----------------------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------- 581 (632)
Q Consensus 534 -----------------------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------- 581 (632)
+|.+....++++||.++|+||||.|||+|.|||||||||||||||+++
T Consensus 1392 dp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLD 1471 (1560)
T PTZ00243 1392 DPVLFDGTVRQNVDPFLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMD 1471 (1560)
T ss_pred CCccccccHHHHhCcccCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 222223347789999999999999999999999999999999999875
Q ss_pred ---------------------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhh
Q 047286 582 ---------------------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 582 ---------------------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~ 629 (632)
|+||||++|+++||+|+||++|+|+|.|+|+||+++++|.|++|++.+
T Consensus 1472 EATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1472 EATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred CCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 899999999999999999999999999999999985589999999865
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.7e-63 Score=605.88 Aligned_cols=248 Identities=17% Similarity=0.213 Sum_probs=191.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|+++.+..++++++.+..++.++..++-.+.+.|.+.|
T Consensus 229 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 308 (1490)
T TIGR01271 229 GFLILLALFQACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYS 308 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777778888999999999999999999999999944
Q ss_pred --------------------CCcccHHH------------------HHHHHHHHHHHHHHHHHHHHHhccCCCCC-----
Q 047286 44 --------------------LEDMPLGQ------------------TSLNVNAFAAGQAAACKMFETIERIPKIN----- 80 (632)
Q Consensus 44 --------------------~~~~~~~~------------------~~~~~~~~~~~~~a~~ri~~~~~~~~~~~----- 80 (632)
.+.++++. +...+..+.++.++.+||.++++.++...
T Consensus 309 ~~~~~~~~~~~~~~f~~y~~~~~~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~ 388 (1490)
T TIGR01271 309 SAFFFSGFFVVFLSVVPYALIKGIILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEYNL 388 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccC
Confidence 00112221 11224556779999999999996432100
Q ss_pred ---------------C------------------------------------CCCcEEEEeeCCCEEEEEcCCCchHHHH
Q 047286 81 ---------------P------------------------------------YDNRFLQHVPSGTTVALVGQSGSGKSTV 109 (632)
Q Consensus 81 ---------------~------------------------------------~~~~~~~~i~~Ge~~~ivG~sGsGKSTL 109 (632)
. .-.++||+|++|++++|+||||||||||
T Consensus 389 ~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTL 468 (1490)
T TIGR01271 389 TTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSL 468 (1490)
T ss_pred CCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHH
Confidence 0 0013899999999999999999999999
Q ss_pred HHHHHhCCCCCcHH--hhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc---
Q 047286 110 INLVESFRFYAPEA--EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV--- 184 (632)
Q Consensus 110 l~ll~~~~~~~~~~--~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v--- 184 (632)
+++|.|........ ...+++||+|+|++|.+++.+ |+.++.. .+.+++.++++.|++.+++..+|.|++|.+
T Consensus 469 l~~l~G~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~e--NI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~ 545 (1490)
T TIGR01271 469 LMMIMGELEPSEGKIKHSGRISFSPQTSWIMPGTIKD--NIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTVLGEG 545 (1490)
T ss_pred HHHHhCCCCCCCceEEECCEEEEEeCCCccCCccHHH--HHHhccc-cchHHHHHHHHHHhHHHHHHhccccccccccCc
Confidence 99998543222111 335699999999999988887 7888753 456678888899999998888888776655
Q ss_pred -----------------------------ccCCCCHHHHHHHHH-HHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeE
Q 047286 185 -----------------------------ATNAVDAQSERIVQA-AMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKI 234 (632)
Q Consensus 185 -----------------------------~ts~LD~~~~~~i~~-~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i 234 (632)
++++||+++++.+.+ ++.++.+++|+|++||+++.+..||+|++|++|++
T Consensus 546 g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i 625 (1490)
T TIGR01271 546 GITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVC 625 (1490)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEE
Confidence 289999999999987 56777778999999999999989999999999999
Q ss_pred EEecChhHHhcCCCcHHHHH
Q 047286 235 VEKGTHDELIEDPEGAYSQL 254 (632)
Q Consensus 235 ~~~g~~~el~~~~~~~~~~~ 254 (632)
++.|+++++... +..|...
T Consensus 626 ~~~g~~~~l~~~-~~~~~~~ 644 (1490)
T TIGR01271 626 YFYGTFSELQAK-RPDFSSL 644 (1490)
T ss_pred EEEcCHHHHHhc-ChHHHHH
Confidence 999999999764 3444443
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-58 Score=497.86 Aligned_cols=281 Identities=31% Similarity=0.453 Sum_probs=237.4
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH--H-----------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK--K----------- 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~--~----------- 414 (632)
|+|+||+++|+..+.+.++..+...+++.+..++++.+|+.. |+|+++.+..+|++.....+..+ +
T Consensus 245 GeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A 324 (716)
T KOG0058|consen 245 GELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALA 324 (716)
T ss_pred cHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999977 99999998888877654421111 0
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.|.+. .....++++|++++..|.++.
T Consensus 325 ~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~ 404 (716)
T KOG0058|consen 325 RANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTS 404 (716)
T ss_pred HHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccch
Confidence 00000 123356889999999999999
Q ss_pred HHHHHHHHHHHH--HHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEEee------------
Q 047286 441 GEVFKFLSEFGC--FWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVFEH------------ 506 (632)
Q Consensus 441 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f~~------------ 506 (632)
|++.+|+.+... ..+..+.....+++++..|.+|+||++|.+|..+.+ +...|....|.|+|+|
T Consensus 405 g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~--G~~~p~~~~G~IeF~~VsFaYP~Rp~~~ 482 (716)
T KOG0058|consen 405 GALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT--GTLAPDHLQGVIEFEDVSFAYPTRPDVP 482 (716)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC--CccccccccceEEEEEeeeecCCCCCch
Confidence 999999854332 235566777789999999999999999999988654 3333335789999998
Q ss_pred -------------EEEEEecCCCChHHHHHhhhcCCChhh------------hc--------------------------
Q 047286 507 -------------TVALVGENGNGKSTVISLAERFHNPEQ------------VI-------------------------- 535 (632)
Q Consensus 507 -------------~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~-------------------------- 535 (632)
+||+||||||||||+++||+|||+|++ ++
T Consensus 483 Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI 562 (716)
T KOG0058|consen 483 VLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENI 562 (716)
T ss_pred hhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHH
Confidence 799999999999999999999999954 11
Q ss_pred -------------HHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------
Q 047286 536 -------------YSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------- 581 (632)
Q Consensus 536 -------------~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------- 581 (632)
.+....|+|+||.++|+||||.|||+|.+||||||||||||||+++
T Consensus 563 ~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~l 642 (716)
T KOG0058|consen 563 AYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYL 642 (716)
T ss_pred hcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHH
Confidence 1222448999999999999999999999999999999999999887
Q ss_pred --------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhhc
Q 047286 582 --------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHMS 631 (632)
Q Consensus 582 --------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~~ 631 (632)
++|||||+|+++||+|+|+++|+|+|.|+|+|||++++|.|++|++.|.-
T Consensus 643 Vq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 643 VQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNGLYAKLVQRQLD 706 (716)
T ss_pred HHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCcccHHHHHHHHhcc
Confidence 89999999999999999999999999999999999867999999999864
No 10
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.7e-51 Score=462.35 Aligned_cols=281 Identities=38% Similarity=0.585 Sum_probs=237.3
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH----------HHHH
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK----------KNYE 417 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~----------~~~~ 417 (632)
|++.+|+++|++.+++.++..++.+++.+..++++++++|+. |+|+++.+.+.|++.....+..+ ..+.
T Consensus 128 g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya 207 (1228)
T KOG0055|consen 128 GELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYA 207 (1228)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988 99999999999988765533221 0111
Q ss_pred HH---------------------------------------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 418 RL---------------------------------------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 418 ~~---------------------------------------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
++ ...++.+|||+.++.++..+.
T Consensus 208 ~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~ 287 (1228)
T KOG0055|consen 208 KAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNG 287 (1228)
T ss_pred HHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 00 235567999999999999999
Q ss_pred HHHHHHH--HHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEEee------------
Q 047286 441 GEVFKFL--SEFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVFEH------------ 506 (632)
Q Consensus 441 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f~~------------ 506 (632)
|+++..+ ..++...+.+..........+..++.++++.++..|+.+....++......+|+|+|+|
T Consensus 288 g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~ 367 (1228)
T KOG0055|consen 288 GDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVK 367 (1228)
T ss_pred ceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcch
Confidence 9877655 33343446777777778888999999999999999887754433334455778899988
Q ss_pred -------------EEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH----------------------
Q 047286 507 -------------TVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI---------------------- 539 (632)
Q Consensus 507 -------------~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~---------------------- 539 (632)
+|||||||||||||+++||+|||||++ ++..|+
T Consensus 368 Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI 447 (1228)
T KOG0055|consen 368 ILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENI 447 (1228)
T ss_pred hhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHH
Confidence 799999999999999999999999954 112221
Q ss_pred -----------------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------
Q 047286 540 -----------------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------- 581 (632)
Q Consensus 540 -----------------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------- 581 (632)
..++++||..||+||||.|||+|.+||||||||||||||+++
T Consensus 448 ~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~ 527 (1228)
T KOG0055|consen 448 RYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERV 527 (1228)
T ss_pred hcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHH
Confidence 337899999999999999999999999999999999999877
Q ss_pred --------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhh
Q 047286 582 --------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 --------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
++|||||+|||+||+|+||++|+|||+|+|+||++. +|.|++|++.|.
T Consensus 528 Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~-~G~Y~~lv~~Q~ 589 (1228)
T KOG0055|consen 528 VQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIAL-GGIYSSLVRLQE 589 (1228)
T ss_pred HHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecCHHHHHhc-cchHHHHHHHHh
Confidence 899999999999999999999999999999999998 799999999884
No 11
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.2e-49 Score=441.83 Aligned_cols=279 Identities=27% Similarity=0.395 Sum_probs=226.9
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH---HHH--------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK---KNY-------- 416 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~---~~~-------- 416 (632)
|++++|+. |.+.+++++...+...+-.+...++.+++++++ |+|++++++..|+++...++..+ +..
T Consensus 251 Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a 329 (709)
T COG2274 251 GEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESA 329 (709)
T ss_pred hhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999985 899999999887777666665555555555555 99999999988887655432211 000
Q ss_pred ---------------------------------HHH-----------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 417 ---------------------------------ERL-----------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 417 ---------------------------------~~~-----------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.+. .....++|+|+.+|..|.+|+
T Consensus 330 ~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTl 409 (709)
T COG2274 330 EQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTL 409 (709)
T ss_pred HHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Confidence 000 234578999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEEee------------
Q 047286 441 GEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVFEH------------ 506 (632)
Q Consensus 441 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f~~------------ 506 (632)
|++++|.+... ..++.++...+.+++....+.+|+.++++.|+|.+.+. .....+...|+|+|+|
T Consensus 410 G~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~-~~~~~~~~~g~I~~~nvsf~y~~~~~~v 488 (709)
T COG2274 410 GQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK-TLIHLPKLQGEIEFENVSFRYGPDDPPV 488 (709)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc-ccccccccCceEEEEEEEEEeCCCCcch
Confidence 99999985444 34678888889999999999999999999999865322 1223445667777776
Q ss_pred ------------EEEEEecCCCChHHHHHhhhcCCChhh-----------------------------------------
Q 047286 507 ------------TVALVGENGNGKSTVISLAERFHNPEQ----------------------------------------- 533 (632)
Q Consensus 507 ------------~vaIVG~SGsGKSTL~~ll~r~y~~~~----------------------------------------- 533 (632)
+|||||+||||||||+++|.|+|+|++
T Consensus 489 L~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~ 568 (709)
T COG2274 489 LEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIA 568 (709)
T ss_pred hhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHh
Confidence 799999999999999999999999943
Q ss_pred ----------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 534 ----------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 534 ----------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
+..+....++|+||.++|.||||+|||+|.+|||||||||+||||+++
T Consensus 569 l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I 648 (709)
T COG2274 569 LGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAII 648 (709)
T ss_pred cCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHH
Confidence 222223448899999999999999999999999999999999999665
Q ss_pred -------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhh
Q 047286 582 -------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 -------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
|+||||++++++||||+|||+|+|+|+|||+||++. +|.|+++|..|.
T Consensus 649 ~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~q~ 709 (709)
T COG2274 649 LQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQQE 709 (709)
T ss_pred HHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhccC
Confidence 899999999999999999999999999999999998 999999998773
No 12
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=8.5e-45 Score=408.31 Aligned_cols=280 Identities=32% Similarity=0.448 Sum_probs=218.0
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHhH-----HH-----
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEG-YLKKK-----KN----- 415 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~-~~~~~-----~~----- 415 (632)
.|.+.+|+++|++.++..+......+...++.+++.+++++.. |.++++.+...|++.... ++.++ +.
T Consensus 108 ~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (567)
T COG1132 108 SGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRKLSRRVREAL 187 (567)
T ss_pred cchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3999999999999999999988666666777778888888777 999988887766654433 22111 00
Q ss_pred -----------------------------HHHH---------------------------HHHHHHHhhhhHHhhcCCcC
Q 047286 416 -----------------------------YERL---------------------------HINAFCFFIGSKLVEHGDAT 439 (632)
Q Consensus 416 -----------------------------~~~~---------------------------~~~~~~~~~g~~~v~~g~~s 439 (632)
+... .....++++|..++..+.++
T Consensus 188 ~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (567)
T COG1132 188 GELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLT 267 (567)
T ss_pred HHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 0000 12334677888999999999
Q ss_pred HHHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEE--------------
Q 047286 440 FGEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIV-------------- 503 (632)
Q Consensus 440 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~-------------- 503 (632)
+|.++.++.... ..++..........+.+..+.+|++++++.+++...+... .....|+|+
T Consensus 268 ~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~~~~~~~I~f~~vsf~y~~~~~v 344 (567)
T COG1132 268 VGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---LKDTIGSIEFENVSFSYPGKKPV 344 (567)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---CCCCCCeEEEEEEEEEcCCCCcc
Confidence 999988874333 2346666777778888999999999999987754322111 011122333
Q ss_pred ---------EeeEEEEEecCCCChHHHHHhhhcCCChhh-----------------------------------------
Q 047286 504 ---------FEHTVALVGENGNGKSTVISLAERFHNPEQ----------------------------------------- 533 (632)
Q Consensus 504 ---------f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~----------------------------------------- 533 (632)
.++++|||||||||||||++||.|||+|++
T Consensus 345 l~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~ 424 (567)
T COG1132 345 LKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIA 424 (567)
T ss_pred ccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHh
Confidence 334899999999999999999999999932
Q ss_pred ----------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 534 ----------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 534 ----------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
++.+....+++|||+++|+||||.|||+|.+||||||||||||||+++
T Consensus 425 ~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I 504 (567)
T COG1132 425 LGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALI 504 (567)
T ss_pred cCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHH
Confidence 222222447899999999999999999999999999999999999776
Q ss_pred -------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhhc
Q 047286 582 -------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHMS 631 (632)
Q Consensus 582 -------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~~ 631 (632)
++||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++||+.|..
T Consensus 505 ~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~~ 566 (567)
T COG1132 505 QDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQGG 566 (567)
T ss_pred HHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhhc
Confidence 579999999999999999999999999999999998 9999999998864
No 13
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-43 Score=398.98 Aligned_cols=279 Identities=21% Similarity=0.198 Sum_probs=203.5
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-hH-----H-------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLK-KK-----K------- 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~-~~-----~------- 414 (632)
|++++|+++|++.+++.+...+..++..++.+++.+++++.. |.++++++++.|+.+...+.. ++ +
T Consensus 120 g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (588)
T PRK11174 120 GSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALA 199 (588)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888888888888888777766 999888887777654433211 10 0
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.+.+. ....++.++++..+ .|.+++
T Consensus 200 ~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~ 278 (588)
T PRK11174 200 RLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSAVLEFFASISIALVAVYFGFSY-LGELNF 278 (588)
T ss_pred HHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccc
Confidence 00000 00111223444433 377777
Q ss_pred HHH-------HHHH----HHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEEe----
Q 047286 441 GEV-------FKFL----SEFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVFE---- 505 (632)
Q Consensus 441 ~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f~---- 505 (632)
|.+ ..+. ......++.........+.++..+.+|+.++++.+++.+....... +....++|+|+
T Consensus 279 G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~-~~~~~~~i~~~~vsf 357 (588)
T PRK11174 279 GHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLETPLAHPQQGEKEL-ASNDPVTIEAEDLEI 357 (588)
T ss_pred ccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCcccc-CCCCCceEEEEeeEE
Confidence 754 1111 1112234566667777888999999999999987654221110000 00011223333
Q ss_pred -------------------eEEEEEecCCCChHHHHHhhhcCCChhh---------------------------------
Q 047286 506 -------------------HTVALVGENGNGKSTVISLAERFHNPEQ--------------------------------- 533 (632)
Q Consensus 506 -------------------~~vaIVG~SGsGKSTL~~ll~r~y~~~~--------------------------------- 533 (632)
+++|||||||||||||+++|.|+| |++
T Consensus 358 ~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~ 436 (588)
T PRK11174 358 LSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPH 436 (588)
T ss_pred eccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCC
Confidence 389999999999999999999999 632
Q ss_pred ------------------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------
Q 047286 534 ------------------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------- 581 (632)
Q Consensus 534 ------------------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------- 581 (632)
++.+....++++||.+||+||||.|||+|.+||||||||||||||+++
T Consensus 437 ~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaL 516 (588)
T PRK11174 437 GTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASL 516 (588)
T ss_pred cCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCC
Confidence 111222347889999999999999999999999999999999999776
Q ss_pred ---------------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhhc
Q 047286 582 ---------------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHMS 631 (632)
Q Consensus 582 ---------------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~~ 631 (632)
|+||||++++++||+|+||++|+|+|+|+|+||+++ +|.|+++++.|..
T Consensus 517 D~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~~eL~~~-~~~y~~l~~~q~~ 586 (588)
T PRK11174 517 DAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDYAELSQA-GGLFATLLAHRQE 586 (588)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCHHHHHhc-chHHHHHHHHhhc
Confidence 799999999999999999999999999999999997 9999999998864
No 14
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.3e-42 Score=398.74 Aligned_cols=275 Identities=29% Similarity=0.397 Sum_probs=213.7
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH------H-------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------K------- 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------~------- 414 (632)
|++++|+++|++.+++.+...+..++..++.+++++++++.. |++++++++..|+.+....+..+ +
T Consensus 258 G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 337 (711)
T TIGR00958 258 GELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVA 337 (711)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888888887766 99988877776665443321110 0
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.+.+. ...++++++|++++..|.+++
T Consensus 338 ~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~ 417 (711)
T TIGR00958 338 KANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSS 417 (711)
T ss_pred HHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 00000 112345678899999999999
Q ss_pred HHHHHHHHHH--HHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEE---------------
Q 047286 441 GEVFKFLSEF--GCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIV--------------- 503 (632)
Q Consensus 441 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~--------------- 503 (632)
|++++++... ...++..+......++++..+.+|++++++.+++.+.+. ...+.+..+.|+
T Consensus 418 G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~ 495 (711)
T TIGR00958 418 GNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVP 495 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCc
Confidence 9999887443 333566777778889999999999999998776543211 101111122233
Q ss_pred ----------EeeEEEEEecCCCChHHHHHhhhcCCChhh----------------------------------------
Q 047286 504 ----------FEHTVALVGENGNGKSTVISLAERFHNPEQ---------------------------------------- 533 (632)
Q Consensus 504 ----------f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------------------------------------- 533 (632)
-++++|||||||||||||+++|+|+|+|++
T Consensus 496 vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI 575 (711)
T TIGR00958 496 VLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENI 575 (711)
T ss_pred cccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHH
Confidence 334899999999999999999999999853
Q ss_pred -----------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------
Q 047286 534 -----------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------- 581 (632)
Q Consensus 534 -----------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------- 581 (632)
++.+....++++||.++|+||||.+||+|.+||||||||||||||+++
T Consensus 576 ~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~ 655 (711)
T TIGR00958 576 AYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQL 655 (711)
T ss_pred hcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHH
Confidence 111111226789999999999999999999999999999999999776
Q ss_pred ------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHH
Q 047286 582 ------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLT 626 (632)
Q Consensus 582 ------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~ 626 (632)
|+||||++++++||+|+||++|+|+|+|+|+||+++ +|.|++|+
T Consensus 656 i~~~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~-~~~y~~lv 711 (711)
T TIGR00958 656 LQESRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMED-QGCYKHLV 711 (711)
T ss_pred HHHhhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhC-CCchHhcC
Confidence 789999999999999999999999999999999997 89999873
No 15
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=8e-42 Score=392.27 Aligned_cols=276 Identities=24% Similarity=0.318 Sum_probs=210.9
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH------H-------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------K------- 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------~------- 414 (632)
|++++|++ |.+.+++.+...+...+..+..+++.+++++.. |.++++++++.|+.+...++..+ +
T Consensus 233 g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (686)
T TIGR03797 233 GDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSG 311 (686)
T ss_pred hHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997 799999988877766666655555666666655 99988887766655443221110 0
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.+.+. ....+++|+|++++..|.+|+
T Consensus 312 ~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~lti 391 (686)
T TIGR03797 312 KISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSL 391 (686)
T ss_pred HHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 00000 123346788999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEEe-------------
Q 047286 441 GEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVFE------------- 505 (632)
Q Consensus 441 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f~------------- 505 (632)
|+++++..... ..++..+......++.+..+.+|+.++++.+++.+... ..+....|.|+|+
T Consensus 392 G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~---~~~~~~~~~I~~~nvsf~Y~~~~~~v 468 (686)
T TIGR03797 392 GSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK---TDPGKLSGAIEVDRVTFRYRPDGPLI 468 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc---CCCCCCCceEEEEEEEEEcCCCCccc
Confidence 99999885433 33566777778888999999999999998766543211 1111122334333
Q ss_pred -----------eEEEEEecCCCChHHHHHhhhcCCChhh-----------------------------------------
Q 047286 506 -----------HTVALVGENGNGKSTVISLAERFHNPEQ----------------------------------------- 533 (632)
Q Consensus 506 -----------~~vaIVG~SGsGKSTL~~ll~r~y~~~~----------------------------------------- 533 (632)
+++|||||||||||||+++|+|+|+|++
T Consensus 469 L~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~ 548 (686)
T TIGR03797 469 LDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIA 548 (686)
T ss_pred eeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHh
Confidence 3899999999999999999999999843
Q ss_pred ---------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 534 ---------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 534 ---------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
++.+....++++||.++|+||||.+||+|.+|||||||||+||||+++
T Consensus 549 ~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~ 628 (686)
T TIGR03797 549 GGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVS 628 (686)
T ss_pred cCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHH
Confidence 111112336789999999999999999999999999999999999766
Q ss_pred ----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhh
Q 047286 582 ----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 582 ----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~ 629 (632)
|+||||++++++||+|+||++|+|+|.|+|+||+++ +|.|++|++.|
T Consensus 629 ~~L~~~~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~~~q 685 (686)
T TIGR03797 629 ESLERLKVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLARRQ 685 (686)
T ss_pred HHHHHhCCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHHHhc
Confidence 789999999999999999999999999999999997 99999999876
No 16
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=9.5e-42 Score=393.39 Aligned_cols=276 Identities=21% Similarity=0.309 Sum_probs=212.2
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH------H-------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------K------- 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------~------- 414 (632)
|++++|+++| +.+++.+...+..++..++.+++.+++++.. |++++++++..|+.+...++..+ +
T Consensus 251 g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (710)
T TIGR03796 251 GDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAG 329 (710)
T ss_pred cHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 6799988888787777777777777777766 99988888777766543322111 0
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.+.+. ...++++++|++++..|.+|+
T Consensus 330 ~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~ 409 (710)
T TIGR03796 330 KLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTI 409 (710)
T ss_pred HHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 00000 123356788999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCC---C-CCCC-CcccccEEEe--------
Q 047286 441 GEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSK---D-GMTP-STVRGDIVFE-------- 505 (632)
Q Consensus 441 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~---~-~~~~-~~~~g~I~f~-------- 505 (632)
|+++++..... ..++..+......++.+..+.+|+.++++.+++.+.... . ...+ +...|.|+|+
T Consensus 410 G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~ 489 (710)
T TIGR03796 410 GMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSP 489 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCC
Confidence 99999874433 335667777788889999999999999987665432110 0 0001 1122334443
Q ss_pred ----------------eEEEEEecCCCChHHHHHhhhcCCChhh------------------------------------
Q 047286 506 ----------------HTVALVGENGNGKSTVISLAERFHNPEQ------------------------------------ 533 (632)
Q Consensus 506 ----------------~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------------------------------ 533 (632)
+++|||||||||||||+++|.|+|+|++
T Consensus 490 ~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi 569 (710)
T TIGR03796 490 LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTV 569 (710)
T ss_pred CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccH
Confidence 3899999999999999999999999853
Q ss_pred ---------------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------
Q 047286 534 ---------------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------- 581 (632)
Q Consensus 534 ---------------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------- 581 (632)
++.+....++++||.++|+||||.+||+|.+||||||||||||||+++
T Consensus 570 ~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~ 649 (710)
T TIGR03796 570 RDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPE 649 (710)
T ss_pred HHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHH
Confidence 111111336789999999999999999999999999999999999776
Q ss_pred ----------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHH
Q 047286 582 ----------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLT 626 (632)
Q Consensus 582 ----------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~ 626 (632)
|+||||++++++||+|+||++|+|+|.|+|+||+++ +|.|++|+
T Consensus 650 te~~i~~~l~~~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 650 TEKIIDDNLRRRGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred HHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 899999999999999999999999999999999997 99999997
No 17
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.2e-41 Score=392.02 Aligned_cols=276 Identities=24% Similarity=0.303 Sum_probs=209.5
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH------H-------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------K------- 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------~------- 414 (632)
|++++|++ |.+.+++.+...+..++..+..+++.+++++.. |++++++++..|+++...++..+ +
T Consensus 253 G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (708)
T TIGR01193 253 GEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANA 331 (708)
T ss_pred hHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 899999888777666666655555555555555 99998888777765543322111 0
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.+.+. ....+++++|++++..|.+|+
T Consensus 332 ~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~ 411 (708)
T TIGR01193 332 VLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTL 411 (708)
T ss_pred HHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 00000 112346788999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEEe-------------
Q 047286 441 GEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVFE------------- 505 (632)
Q Consensus 441 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f~------------- 505 (632)
|+++++..... ..++..+......++.+..+.+|+.++++.+++.+.... ....+...|.|+|+
T Consensus 412 G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~-~~~~~~~~~~I~~~~vsf~y~~~~~iL 490 (708)
T TIGR01193 412 GQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKK-RTELNNLNGDIVINDVSYSYGYGSNIL 490 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccc-ccCCCCCCCcEEEEEEEEEcCCCCcce
Confidence 99999884433 345677778888899999999999999987765432110 00011122334443
Q ss_pred ----------eEEEEEecCCCChHHHHHhhhcCCChhh------------------------------------------
Q 047286 506 ----------HTVALVGENGNGKSTVISLAERFHNPEQ------------------------------------------ 533 (632)
Q Consensus 506 ----------~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------------------------------------ 533 (632)
+++|||||||||||||+++|.|+|+|++
T Consensus 491 ~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l 570 (708)
T TIGR01193 491 SDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLL 570 (708)
T ss_pred eceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhc
Confidence 3899999999999999999999999843
Q ss_pred ----------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 534 ----------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 534 ----------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
++.+....++++||.++|+||||.|||+|.+|||||||||+||||+++
T Consensus 571 ~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i 650 (708)
T TIGR01193 571 GAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKI 650 (708)
T ss_pred cCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHH
Confidence 001111236789999999999999999999999999999999999766
Q ss_pred ------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHH
Q 047286 582 ------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTA 627 (632)
Q Consensus 582 ------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~ 627 (632)
|+||||+++++.||+|+||++|+|+|.|+|+||+++ +|.|++|++
T Consensus 651 ~~~L~~~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 651 VNNLLNLQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDR-NGFYASLIH 707 (708)
T ss_pred HHHHHHhcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhc-CCcHHHHhh
Confidence 789999999999999999999999999999999997 999999986
No 18
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.4e-43 Score=376.87 Aligned_cols=254 Identities=39% Similarity=0.593 Sum_probs=230.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++.+|+++++..+++++.++++++.|++.++++.+++|.+.+
T Consensus 295 ~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f 374 (716)
T KOG0058|consen 295 LIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIF 374 (716)
T ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Confidence 567899999999999999999999999999999999999831
Q ss_pred ------------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 047286 44 ------------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINPY 82 (632)
Q Consensus 44 ------------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~ 82 (632)
.|.++.|++ +..+..+++|..|++|+||++|++|.++..
T Consensus 375 ~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~ 454 (716)
T KOG0058|consen 375 FGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT 454 (716)
T ss_pred HhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC
Confidence 344555543 456788999999999999999999976432
Q ss_pred C-----------------------------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----------
Q 047286 83 D-----------------------------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA---------- 123 (632)
Q Consensus 83 ~-----------------------------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~---------- 123 (632)
. +++||+|+|||++|+||||||||||++++|. ++|+|..
T Consensus 455 G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~--rfY~PtsG~IllDG~~i 532 (716)
T KOG0058|consen 455 GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLL--RFYDPTSGRILLDGVPI 532 (716)
T ss_pred CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHH--HhcCCCCCeEEECCeeh
Confidence 1 0199999999999999999999999999998 7777653
Q ss_pred -------hhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc------------
Q 047286 124 -------EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV------------ 184 (632)
Q Consensus 124 -------~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v------------ 184 (632)
+|++||+|.|||.+|.+++++ ||.||.++.++|++..+++.++.++||..+|+|++|.|
T Consensus 533 ~~~~~~~lr~~Ig~V~QEPvLFs~sI~e--NI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQK 610 (716)
T KOG0058|consen 533 SDINHKYLRRKIGLVGQEPVLFSGSIRE--NIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQK 610 (716)
T ss_pred hhcCHHHHHHHeeeeeccceeecccHHH--HHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHH
Confidence 789999999999999999999 89999999999999999999999999999999999988
Q ss_pred --------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHh
Q 047286 185 --------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 185 --------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~ 244 (632)
+|||||.++|..++++|.+..+++|||+|+|+++++++||+|+++++|+++|.|+|+|++
T Consensus 611 QRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl 690 (716)
T KOG0058|consen 611 QRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELL 690 (716)
T ss_pred HHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHh
Confidence 399999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHh
Q 047286 245 EDPEGAYSQLVRLQE 259 (632)
Q Consensus 245 ~~~~~~~~~~~~~~~ 259 (632)
..+++.|.++.+.|.
T Consensus 691 ~~~~gly~~Lv~~q~ 705 (716)
T KOG0058|consen 691 SKPNGLYAKLVQRQL 705 (716)
T ss_pred hCcccHHHHHHHHhc
Confidence 998889999987664
No 19
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=360.41 Aligned_cols=200 Identities=31% Similarity=0.388 Sum_probs=165.8
Q ss_pred hHHhhcCCcCHHHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEEee-
Q 047286 430 SKLVEHGDATFGEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVFEH- 506 (632)
Q Consensus 430 ~~~v~~g~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f~~- 506 (632)
.+++.++.+++|+++.|..++. ..++--.......+++.....++.+++++++++.... ++..+....+|.|+|+|
T Consensus 465 aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~-P~a~pl~~~~G~i~fsnv 543 (790)
T KOG0056|consen 465 AYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDL-PGAPPLKVTQGKIEFSNV 543 (790)
T ss_pred eeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcC-CCCCCccccCCeEEEEEe
Confidence 3566788999999888774332 2234445556667888888999999999998887532 23334445578888887
Q ss_pred ----------------------EEEEEecCCCChHHHHHhhhcCCChhh-------------------------------
Q 047286 507 ----------------------TVALVGENGNGKSTVISLAERFHNPEQ------------------------------- 533 (632)
Q Consensus 507 ----------------------~vaIVG~SGsGKSTL~~ll~r~y~~~~------------------------------- 533 (632)
++|+|||||+||||++++|+||||.++
T Consensus 544 tF~Y~p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvL 623 (790)
T KOG0056|consen 544 TFAYDPGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVL 623 (790)
T ss_pred EEecCCCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCccee
Confidence 799999999999999999999998743
Q ss_pred --------------------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------
Q 047286 534 --------------------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------ 581 (632)
Q Consensus 534 --------------------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------ 581 (632)
+..+...+++||-|.++|+||+|.|||+|-.||||||||+||||++++
T Consensus 624 FNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATS 703 (790)
T KOG0056|consen 624 FNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATS 703 (790)
T ss_pred ecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhh
Confidence 111222347899999999999999999999999999999999999877
Q ss_pred -----------------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhh
Q 047286 582 -----------------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 -----------------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
|++||||||+-|||.|+|+++|+|+|+|+|+||+++.+|.|++||+.|.
T Consensus 704 ALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qq 775 (790)
T KOG0056|consen 704 ALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQQ 775 (790)
T ss_pred hcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHHH
Confidence 8999999999999999999999999999999999988899999997664
No 20
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.8e-43 Score=371.37 Aligned_cols=171 Identities=21% Similarity=0.331 Sum_probs=130.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------------HH----hhcceEEEcccCcc-ccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------------EA----EQEKIGLVSKEPIF-LFC 140 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------------~~----~r~~i~~v~Q~~~~-~~~ 140 (632)
++||+|.+||++||||+|||||||+.+.|.|+..+++ .+ ..+.|+|+||+|.- ++.
T Consensus 27 ~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP 106 (539)
T COG1123 27 DVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNP 106 (539)
T ss_pred cceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCc
Confidence 4999999999999999999999999999986543331 00 13579999999852 333
Q ss_pred ccccccccc----cCC---CCCCHHHHHHHHHHccchhh------HhhCCccccccc-----------------ccCCCC
Q 047286 141 DFNEGQYIP----YGK---QNASDEHIRPAVQLANAEKS------IDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 141 ~~~~~~~i~----~~~---~~~~~~~~~~~~~~~~l~~~------i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.++..+.+. ... .....++..+.++.+++.+. ..+||+|+.+++ +|.+||
T Consensus 107 ~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLD 186 (539)
T COG1123 107 VMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALD 186 (539)
T ss_pred hhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccC
Confidence 222211111 111 11234556677788877543 445778988887 399999
Q ss_pred HHHHHHHHHHHHHHh--CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 191 AQSERIVQAAMVKLV--TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~--~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
+.++.+|.+.|+++. .+.++|+||||+..+.+ ||||+||++|+++|.|+.+++++++.++|.+..
T Consensus 187 vt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~p~hpYT~~L 254 (539)
T COG1123 187 VTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSNPQHPYTRGL 254 (539)
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhccCCcccHHH
Confidence 999999999999986 47899999999999876 999999999999999999999999888887543
No 21
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.9e-41 Score=375.68 Aligned_cols=276 Identities=21% Similarity=0.254 Sum_probs=206.0
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH--HHHHhH-----HH----
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAE--GYLKKK-----KN---- 415 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~--~~~~~~-----~~---- 415 (632)
.|++++|+++|++.++..+...+..++..++.+++++++++.. |+++++++++.|+++.. .+..++ +.
T Consensus 116 ~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (574)
T PRK11160 116 QGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHL 195 (574)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3999999999999999999999999998888888888877766 99988776655543221 111110 00
Q ss_pred ------------------------------HHHH---------------------------HHHHHHHhhhhHHhhcCCc
Q 047286 416 ------------------------------YERL---------------------------HINAFCFFIGSKLVEHGDA 438 (632)
Q Consensus 416 ------------------------------~~~~---------------------------~~~~~~~~~g~~~v~~g~~ 438 (632)
+.+. ...++++++|+.++ .|.+
T Consensus 196 ~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~ 274 (574)
T PRK11160 196 RAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGV-GGNA 274 (574)
T ss_pred HHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccc
Confidence 0000 11223456777774 7899
Q ss_pred CHHHHHHHHHHHH---HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEE------------
Q 047286 439 TFGEVFKFLSEFG---CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIV------------ 503 (632)
Q Consensus 439 s~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~------------ 503 (632)
++|.+++++.... ..++..+......++++..+.+|+.++++.+++.+.+.... ..+..+.|+
T Consensus 275 t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~~ 352 (574)
T PRK11160 275 QPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFPTTST--AAADQVSLTLNNVSFTYPDQP 352 (574)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccC--CCCCCCeEEEEEEEEECCCCC
Confidence 9999888763321 12344455666778888999999999998876532211100 001112233
Q ss_pred ------------EeeEEEEEecCCCChHHHHHhhhcCCChhh--------------------------------------
Q 047286 504 ------------FEHTVALVGENGNGKSTVISLAERFHNPEQ-------------------------------------- 533 (632)
Q Consensus 504 ------------f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~-------------------------------------- 533 (632)
.++++|||||||||||||+++|+|+|+|++
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ 432 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRD 432 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHH
Confidence 333899999999999999999999999853
Q ss_pred -------------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------
Q 047286 534 -------------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------- 581 (632)
Q Consensus 534 -------------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------- 581 (632)
++.+....++++|+++ |+||||.|||+|.+||||||||||||||+++
T Consensus 433 Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~ 511 (574)
T PRK11160 433 NLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETE 511 (574)
T ss_pred HhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHH
Confidence 0111112267899999 9999999999999999999999999999766
Q ss_pred ----------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHh
Q 047286 582 ----------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTAL 628 (632)
Q Consensus 582 ----------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~ 628 (632)
+++|||++++++||+|++|++|+|+|+|+|+||+++ +|.|++||+.
T Consensus 512 ~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 512 RQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred HHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhc-CcHHHHHHhh
Confidence 789999999999999999999999999999999997 9999999874
No 22
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=376.63 Aligned_cols=282 Identities=26% Similarity=0.349 Sum_probs=214.3
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH------H-------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------K------- 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------~------- 414 (632)
|++.+|+++|++.+++.+...+..++..++.+++.+++++.. |.++++++++.|+.+...+...+ +
T Consensus 122 g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 201 (582)
T PRK11176 122 GTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMG 201 (582)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888888888888888777666 98888887776665443321111 0
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.+++. .....++++|+.++..|.+++
T Consensus 202 ~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~ 281 (582)
T PRK11176 202 QVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTA 281 (582)
T ss_pred HHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 00000 112345677888999999999
Q ss_pred HHHHHHHHH--HHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCC------C---------------CCCc
Q 047286 441 GEVFKFLSE--FGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDG------M---------------TPST 497 (632)
Q Consensus 441 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~------~---------------~~~~ 497 (632)
|+++++... ....++..........+.+..+.+|+.++++.+++.+...... . ....
T Consensus 282 g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~y~~~~~~il~~ 361 (582)
T PRK11176 282 GTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKRVIERAKGDIEFRNVTFTYPGKEVPALRN 361 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCcCCCCCCCeEEEEEEEEecCCCCCccccC
Confidence 998776633 3334566777777888899999999999987665422110000 0 0011
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh--------------------------------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ-------------------------------------------- 533 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~-------------------------------------------- 533 (632)
.+-+|+.++++||||+||||||||+++|+|+|+|++
T Consensus 362 i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~ 441 (582)
T PRK11176 362 INFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYAR 441 (582)
T ss_pred ceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCC
Confidence 111233344899999999999999999999999843
Q ss_pred --------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 534 --------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 534 --------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
++.+....++++|+.+||+||||.+||+|.+|||||||||+||||+++
T Consensus 442 ~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~ 521 (582)
T PRK11176 442 TEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQA 521 (582)
T ss_pred CCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHH
Confidence 001111236789999999999999999999999999999999999776
Q ss_pred -----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhhc
Q 047286 582 -----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHMS 631 (632)
Q Consensus 582 -----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~~ 631 (632)
|+||||+++++.||+|++|++|+|+|+|+|++|+++ +|.|++|++.|.+
T Consensus 522 ~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~~~ 581 (582)
T PRK11176 522 ALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQFG 581 (582)
T ss_pred HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHHhc
Confidence 789999999999999999999999999999999997 8999999998764
No 23
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-41 Score=342.29 Aligned_cols=199 Identities=30% Similarity=0.371 Sum_probs=160.3
Q ss_pred hhhhHHhhcCCcCHHHHHHHHH--HHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCC-cccccEE
Q 047286 427 FIGSKLVEHGDATFGEVFKFLS--EFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPS-TVRGDIV 503 (632)
Q Consensus 427 ~~g~~~v~~g~~s~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~-~~~g~I~ 503 (632)
..+...+.+|.+++|+++.... .....+..-......++.++....++.+++++.+.+..... +...+. ...|.|.
T Consensus 186 ~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~p-da~~L~~~~~g~v~ 264 (497)
T COG5265 186 TMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAP-DAPPLWPVRLGAVA 264 (497)
T ss_pred hhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCC-CCccccccccceEE
Confidence 3455678889999999886652 22333344445555677888889999999998877665322 122212 3346677
Q ss_pred Eee-----------------------EEEEEecCCCChHHHHHhhhcCCChhh---------hc----------------
Q 047286 504 FEH-----------------------TVALVGENGNGKSTVISLAERFHNPEQ---------VI---------------- 535 (632)
Q Consensus 504 f~~-----------------------~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---------------- 535 (632)
|.+ ++||||+||+||||+.+||+||||+++ ++
T Consensus 265 F~~V~F~y~~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQ 344 (497)
T COG5265 265 FINVSFAYDPRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQ 344 (497)
T ss_pred EEEEEeeccccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCcc
Confidence 776 799999999999999999999999854 11
Q ss_pred --------------------------HHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------
Q 047286 536 --------------------------YSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------- 581 (632)
Q Consensus 536 --------------------------~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------- 581 (632)
.+....++|+||..+|+||||.|||+|-.||||||||+||||++++
T Consensus 345 DtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaiar~ilk~p~il~~d 424 (497)
T COG5265 345 DTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIARTILKNPPILILD 424 (497)
T ss_pred cceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHHHHHHhcCCCEEEEe
Confidence 1111337889999999999999999999999999999999999877
Q ss_pred ---------------------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHH
Q 047286 582 ---------------------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTA 627 (632)
Q Consensus 582 ---------------------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~ 627 (632)
++|||||+|+-+||.|+||++|+|+|+|||+||+++ +|.|++||.
T Consensus 425 eatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 425 EATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred hhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHHc-CChHHHHhc
Confidence 899999999999999999999999999999999998 999999995
No 24
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.8e-40 Score=377.79 Aligned_cols=278 Identities=24% Similarity=0.324 Sum_probs=210.3
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh-----H--H------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKK-----K--K------ 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~-----~--~------ 414 (632)
|++.+|+ +|++.+++.+...+..++..++.+++.+++++.. |.+++++++..|+++...++.. . +
T Consensus 236 g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 314 (694)
T TIGR01846 236 GDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSA 314 (694)
T ss_pred HHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 6999999988776666665555444445555555 9998888777766554332111 0 0
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.+.+. ...++++|+|+.++..|.+|+
T Consensus 315 ~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~ 394 (694)
T TIGR01846 315 AATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSP 394 (694)
T ss_pred HHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCH
Confidence 00000 123346788999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEE--------------
Q 047286 441 GEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVF-------------- 504 (632)
Q Consensus 441 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f-------------- 504 (632)
|+++++..... ..++.........++.+..+.+|+.++++.+++.+... ....+...+.|+|
T Consensus 395 G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~--~~~~~~~~~~i~~~~vsf~y~~~~~~i 472 (694)
T TIGR01846 395 GQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAG--LAALPELRGAITFENIRFRYAPDSPEV 472 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCC--CCCCCCCCCeEEEEEEEEEcCCCCccc
Confidence 99998874433 34567777778889999999999999998776543211 0001112233333
Q ss_pred ----------eeEEEEEecCCCChHHHHHhhhcCCChhh------------hc---------------------------
Q 047286 505 ----------EHTVALVGENGNGKSTVISLAERFHNPEQ------------VI--------------------------- 535 (632)
Q Consensus 505 ----------~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~--------------------------- 535 (632)
++++||||+||||||||+++|.|+|+|++ ++
T Consensus 473 l~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~ 552 (694)
T TIGR01846 473 LSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIA 552 (694)
T ss_pred cccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHh
Confidence 33899999999999999999999999853 01
Q ss_pred ------------HHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 536 ------------YSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 536 ------------~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
.+....+++++|.++|+||||.+||+|.+|||||||||+||||+++
T Consensus 553 ~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i 632 (694)
T TIGR01846 553 LCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALI 632 (694)
T ss_pred cCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHH
Confidence 1111226789999999999999999999999999999999999766
Q ss_pred -------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhh
Q 047286 582 -------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 -------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
+++|||+++++.||+|++|++|+|+|+|+|+||+++ +|.|++|++.|.
T Consensus 633 ~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 693 (694)
T TIGR01846 633 MRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL-QGLYARLWQQQS 693 (694)
T ss_pred HHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc-CChHHHHHHhhc
Confidence 789999999999999999999999999999999997 999999999875
No 25
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.7e-40 Score=379.03 Aligned_cols=268 Identities=22% Similarity=0.321 Sum_probs=202.3
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH------H------
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------K------ 414 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------~------ 414 (632)
.|++++|+ +|++.+++.+...+...+..+..+++.+++++.. |.+++++++..|+.+...++..+ +
T Consensus 242 ~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 320 (694)
T TIGR03375 242 VGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRES 320 (694)
T ss_pred hhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 39999999 7999999998877666666665555555556655 99988887777766544322111 0
Q ss_pred ----------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcC
Q 047286 415 ----------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDAT 439 (632)
Q Consensus 415 ----------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s 439 (632)
.+.+. ...+.++++|++++.+|.+|
T Consensus 321 ~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls 400 (694)
T TIGR03375 321 AQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELT 400 (694)
T ss_pred HHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 00000 12334678899999999999
Q ss_pred HHHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEEe------------
Q 047286 440 FGEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVFE------------ 505 (632)
Q Consensus 440 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f~------------ 505 (632)
+|++++++.... ..++..+......++.+..+.+|+.++++.+++.+... .....+...+.|+|+
T Consensus 401 ~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~-~~~~~~~~~~~I~~~~vsf~Y~~~~~~ 479 (694)
T TIGR03375 401 MGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT-RFLHRPRLQGEIEFRNVSFAYPGQETP 479 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CCCCCCCccceEEEEEEEEEeCCCCcc
Confidence 999999885443 34566777778889999999999999998876532211 101111122334443
Q ss_pred ------------eEEEEEecCCCChHHHHHhhhcCCChhh----------------------------------------
Q 047286 506 ------------HTVALVGENGNGKSTVISLAERFHNPEQ---------------------------------------- 533 (632)
Q Consensus 506 ------------~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------------------------------------- 533 (632)
+++||||+||||||||+++|.|+|+|++
T Consensus 480 vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi 559 (694)
T TIGR03375 480 ALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNI 559 (694)
T ss_pred ceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHH
Confidence 3899999999999999999999999843
Q ss_pred -----------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------
Q 047286 534 -----------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------- 581 (632)
Q Consensus 534 -----------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------- 581 (632)
++.+....++++||.+||+||||.+||+|.+|||||||||+||||+++
T Consensus 560 ~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~ 639 (694)
T TIGR03375 560 ALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEER 639 (694)
T ss_pred hCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHH
Confidence 111111236789999999999999999999999999999999999766
Q ss_pred --------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 --------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 --------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
++||||+++++.||+|+||++|+|+|+|+|+||+++
T Consensus 640 i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 640 FKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 789999999999999999999999999999999975
No 26
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-39 Score=368.86 Aligned_cols=280 Identities=21% Similarity=0.285 Sum_probs=205.6
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH--------------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK-------------- 413 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~-------------- 413 (632)
|++++|+++|++.+++.+...+..++..+..+++.+++++.. |.+++++++..|+.+...++..+
T Consensus 122 g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 201 (592)
T PRK10790 122 GQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLA 201 (592)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888888887777777766665 88887776666654332211100
Q ss_pred ----------------HHH----------HH-------H-------HH--------------HHHHHhhhhHHhhcCCcC
Q 047286 414 ----------------KNY----------ER-------L-------HI--------------NAFCFFIGSKLVEHGDAT 439 (632)
Q Consensus 414 ----------------~~~----------~~-------~-------~~--------------~~~~~~~g~~~v~~g~~s 439 (632)
+.+ .+ . .. ...++++++. +..|.++
T Consensus 202 ~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is 280 (592)
T PRK10790 202 DINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIE 280 (592)
T ss_pred HHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcC
Confidence 000 00 0 00 0011122232 5689999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCC-----CC--------------CCcc
Q 047286 440 FGEVFKFLSEF--GCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDG-----MT--------------PSTV 498 (632)
Q Consensus 440 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~-----~~--------------~~~~ 498 (632)
+|.++++.... ...++.........++.+..+.+|+.++++.+++........ .. ..+.
T Consensus 281 ~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~il~~i 360 (592)
T PRK10790 281 VGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGNDDRPLQSGRIDIDNVSFAYRDDNLVLQNI 360 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCccCCCCCeEEEEEEEEEeCCCCceeece
Confidence 99998887433 334566777778888999999999999997654321110000 00 0001
Q ss_pred cccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------------------------------------------
Q 047286 499 RGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ--------------------------------------------- 533 (632)
Q Consensus 499 ~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~--------------------------------------------- 533 (632)
+-+|+.++++||||+||||||||+++|.|+|+|++
T Consensus 361 ~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~ 440 (592)
T PRK10790 361 NLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRD 440 (592)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCC
Confidence 11222334899999999999999999999999853
Q ss_pred -----hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------------
Q 047286 534 -----VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------------- 581 (632)
Q Consensus 534 -----~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------------- 581 (632)
++.+....+++++|.+||+||||.+||+|.+||||||||||||||+++
T Consensus 441 ~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~ 520 (592)
T PRK10790 441 ISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALA 520 (592)
T ss_pred CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 011111236789999999999999999999999999999999999766
Q ss_pred --------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhh
Q 047286 582 --------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 --------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
|++|||+++++.||+|++|++|+|+|.|||+||+++ ++.|+++++.|.
T Consensus 521 ~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~l~~~~~ 576 (592)
T PRK10790 521 AVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQMYQLQL 576 (592)
T ss_pred HHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHHHHHHHh
Confidence 789999999999999999999999999999999997 999999998774
No 27
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-39 Score=344.34 Aligned_cols=281 Identities=24% Similarity=0.214 Sum_probs=212.1
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH---H---------
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK---K--------- 414 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~---~--------- 414 (632)
.|+..+.++..++.++..+...++.+..........++.+++. |.-+++++.+.|++.+.+++... +
T Consensus 96 ~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~~~~ 175 (559)
T COG4988 96 AGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQFSAL 175 (559)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4999999999999999999999999999888777777666665 99988888887776554432111 0
Q ss_pred ------------------HH-----------------HHH--------------------HHHHHHHhhhhHHhhc-CCc
Q 047286 415 ------------------NY-----------------ERL--------------------HINAFCFFIGSKLVEH-GDA 438 (632)
Q Consensus 415 ------------------~~-----------------~~~--------------------~~~~~~~~~g~~~v~~-g~~ 438 (632)
.+ ++. .+.+++..+.+..... |.+
T Consensus 176 ~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~l 255 (559)
T COG4988 176 ARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDL 255 (559)
T ss_pred HHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 00 000 1122222333333344 889
Q ss_pred CHHHHHHHH--HHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCC-------C----------------C
Q 047286 439 TFGEVFKFL--SEFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKD-------G----------------M 493 (632)
Q Consensus 439 s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~-------~----------------~ 493 (632)
++...+.++ +.-.+.++.+..+.++..+.+..+.+.++.+++.|++....... . .
T Consensus 256 tl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~g~~ 335 (559)
T COG4988 256 TLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPDGKP 335 (559)
T ss_pred cHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCCCCc
Confidence 988777666 33334568899999999999999999999999887653221100 0 0
Q ss_pred CCCcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh----------------------------------------
Q 047286 494 TPSTVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------------------------------------- 533 (632)
Q Consensus 494 ~~~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------------------------------------- 533 (632)
.+.++.-+++-++++||||+||||||||+++|.||+.|++
T Consensus 336 ~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi 415 (559)
T COG4988 336 ALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENI 415 (559)
T ss_pred ccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHh
Confidence 0111122344455899999999999999999999998743
Q ss_pred -----------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------
Q 047286 534 -----------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------- 581 (632)
Q Consensus 534 -----------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------- 581 (632)
++.+....++.+|+.. |+|+||.+||+|.+|||||+||+++|||+++
T Consensus 416 ~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~ 494 (559)
T COG4988 416 LLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQI 494 (559)
T ss_pred hccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHH
Confidence 1111112366799999 9999999999999999999999999999766
Q ss_pred --------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhh
Q 047286 582 --------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 --------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
+++|||++.+++||+|+|||+|+++|+|+|+||+++ +|.|++|+..|.
T Consensus 495 i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~ 556 (559)
T COG4988 495 ILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQE 556 (559)
T ss_pred HHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHh
Confidence 899999999999999999999999999999999997 999999998875
No 28
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.3e-39 Score=363.20 Aligned_cols=282 Identities=27% Similarity=0.390 Sum_probs=217.8
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH------H-------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------K------- 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------~------- 414 (632)
|++.+|+++|++.+++.+...+..++..++.+++.+++++.. |.++++++++.|+.+...++..+ +
T Consensus 111 g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 190 (571)
T TIGR02203 111 GTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMG 190 (571)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998999898888888888877766 99998888777776554432211 0
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
.+.+. ....+++++|+.++.+|.+++
T Consensus 191 ~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~ 270 (571)
T TIGR02203 191 QVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIALFQAQAGSLTA 270 (571)
T ss_pred HHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 00000 112346778999999999999
Q ss_pred HHHHHHHHHH--HHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCC------CC---------------CCc
Q 047286 441 GEVFKFLSEF--GCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDG------MT---------------PST 497 (632)
Q Consensus 441 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~------~~---------------~~~ 497 (632)
|.++++.... ...++..+......+..++.+.+|+.++++.+++.+...... .. .++
T Consensus 271 g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~il~~ 350 (571)
T TIGR02203 271 GDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTRAIERARGDVEFRNVTFRYPGRDRPALDS 350 (571)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCeEEEEEEEEEcCCCCCccccC
Confidence 9999888433 334567777778888999999999999998765532111000 00 001
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh--------------------------------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ-------------------------------------------- 533 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~-------------------------------------------- 533 (632)
.+-+|+-+++++|||+||||||||+++|.|+|+|++
T Consensus 351 inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~ 430 (571)
T TIGR02203 351 ISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGR 430 (571)
T ss_pred eeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCC
Confidence 111223345899999999999999999999998843
Q ss_pred --------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 534 --------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 534 --------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
++......++++++.+||+||||.+||+|.+||||||||||||||+++
T Consensus 431 ~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~ 510 (571)
T TIGR02203 431 TEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQA 510 (571)
T ss_pred CCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHH
Confidence 000111226789999999999999999999999999999999999766
Q ss_pred -----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhhc
Q 047286 582 -----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHMS 631 (632)
Q Consensus 582 -----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~~ 631 (632)
|+||||++.++.||+|++|++|+++|.|+|++|++. ++.|+++++.+.+
T Consensus 511 ~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~~~~~~ 570 (571)
T TIGR02203 511 ALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYAQLHNMQFR 570 (571)
T ss_pred HHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHHHHHHHhhc
Confidence 789999999999999999999999999999999997 8999999987654
No 29
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6e-39 Score=333.98 Aligned_cols=167 Identities=27% Similarity=0.395 Sum_probs=135.8
Q ss_pred HHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCC------------------CC---cccccEEEeeEEEEEecCCCChH
Q 047286 461 VAPNADKAKGSAASIFEILESKPKIDWSSKDGMT------------------PS---TVRGDIVFEHTVALVGENGNGKS 519 (632)
Q Consensus 461 ~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~------------------~~---~~~g~I~f~~~vaIVG~SGsGKS 519 (632)
.+....+...|+.|+.++.+.+++...+...... ++ +.+-.+.-+++|||+||||||||
T Consensus 299 A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 299 AFQHLGQVIASARRLNDILDQKPEVTFPDEQTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred hHHHhhHHHHHHHHHhhhccCCcccCCCccccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHH
Confidence 3356667788999999999998876544110000 00 11123444459999999999999
Q ss_pred HHHHhhhcCCChhh---------------------------------------------------hcHHHHHHHHHHHHh
Q 047286 520 TVISLAERFHNPEQ---------------------------------------------------VIYSWIIIKCTNFIA 548 (632)
Q Consensus 520 TL~~ll~r~y~~~~---------------------------------------------------~~~~~~~~~~~~~i~ 548 (632)
|++++|.|-|+|++ +|......++++++.
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 99999999999854 222222347789999
Q ss_pred cCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------------------hccccchhhhhc
Q 047286 549 SLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-----------------------------------CGCGSPPYHYKN 593 (632)
Q Consensus 549 ~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-----------------------------------~~iahrl~~~~~ 593 (632)
+.|+||+|++||+|.+||||||||+||||++++ ++||||+.-++.
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 999999999999999999999999999999877 899999999999
Q ss_pred CCEEEEEeCCeEeeecChHHHhccCCchhHHHHHh
Q 047286 594 ADITSVVKNGVIAEKGRHDALMKITDGTYASLTAL 628 (632)
Q Consensus 594 aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~ 628 (632)
||+|+|||+|+|+|+|+|+||+.+ +|.|++|++.
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q~ 572 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQL 572 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhcc
Confidence 999999999999999999999997 9999999863
No 30
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.7e-38 Score=358.77 Aligned_cols=279 Identities=26% Similarity=0.333 Sum_probs=206.5
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH--H----H------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK--K----N------ 415 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~--~----~------ 415 (632)
|++++|+++|++.+...+...+..++..++.+++.+++++.. |.++++++++.|+.+...+...+ + .
T Consensus 113 g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 192 (588)
T PRK13657 113 GRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYH 192 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998887777777777666666666666655 88888777766665443221111 0 0
Q ss_pred ----------------------------HHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 416 ----------------------------YERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 416 ----------------------------~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
+.+. .....++++|++++.+|.+++
T Consensus 193 ~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~ 272 (588)
T PRK13657 193 DLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVLGAALVQKGQLRV 272 (588)
T ss_pred HHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCH
Confidence 0000 112345678999999999999
Q ss_pred HHHHHHHHHH--HHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEE--------------
Q 047286 441 GEVFKFLSEF--GCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVF-------------- 504 (632)
Q Consensus 441 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f-------------- 504 (632)
|++++++... ...++..+.........+..+.+|+.++++.+++.+.... ....+...+.|+|
T Consensus 273 g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~-~~~~~~~~~~I~~~~vsf~y~~~~~iL 351 (588)
T PRK13657 273 GEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPG-AIDLGRVKGAVEFDDVSFSYDNSRQGV 351 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC-CCCcCCCCCeEEEEEEEEEeCCCCcee
Confidence 9998877433 3334556666777788888999999999876544221100 0000111122222
Q ss_pred ---------eeEEEEEecCCCChHHHHHhhhcCCChhh------------------------------------------
Q 047286 505 ---------EHTVALVGENGNGKSTVISLAERFHNPEQ------------------------------------------ 533 (632)
Q Consensus 505 ---------~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------------------------------------ 533 (632)
++++||||+||||||||+++|.|+|+|++
T Consensus 352 ~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~ 431 (588)
T PRK13657 352 EDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRV 431 (588)
T ss_pred cceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhc
Confidence 23899999999999999999999999843
Q ss_pred ---------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 534 ---------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 534 ---------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
++.+....++++|+.++|+|+||.+||+|.+||||||||||||||+++
T Consensus 432 ~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~ 511 (588)
T PRK13657 432 GRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVK 511 (588)
T ss_pred CCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHH
Confidence 111111226679999999999999999999999999999999999766
Q ss_pred ------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhh
Q 047286 582 ------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 582 ------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~ 629 (632)
++||||++.++.||+|++|++|+++|+|+|+||+++ +|.|++|++.+
T Consensus 512 ~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~ 570 (588)
T PRK13657 512 AALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQ 570 (588)
T ss_pred HHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHh
Confidence 789999999999999999999999999999999997 89999999865
No 31
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.8e-38 Score=357.09 Aligned_cols=280 Identities=23% Similarity=0.302 Sum_probs=210.5
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-hH-----HH------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLK-KK-----KN------ 415 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~-~~-----~~------ 415 (632)
|++++|+++|++.+...+...+..++..++.+++.+++++.. |.++++++++.|+++...... ++ +.
T Consensus 113 g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (585)
T TIGR01192 113 SNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYH 192 (585)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888887777777777776767666 999988887777654433211 11 00
Q ss_pred ----------------------------HHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 416 ----------------------------YERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 416 ----------------------------~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
+.+. ....+++++|++++.+|.+++
T Consensus 193 ~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~ 272 (585)
T TIGR01192 193 NVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVIGTVLVIKGELSV 272 (585)
T ss_pred HHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 0000 112345678999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEE--------------
Q 047286 441 GEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVF-------------- 504 (632)
Q Consensus 441 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f-------------- 504 (632)
|++++++.... ..++.........+..+..+.+|+.++++.+++...+.. ....+...+.|+|
T Consensus 273 g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~~~~l 351 (585)
T TIGR01192 273 GEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-APELPNVKGAVEFRHITFEFANSSQGV 351 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc-CCCCCCCCCeEEEEEEEEECCCCCccc
Confidence 99998874333 334566677777888889999999999877544321110 0000011122222
Q ss_pred ---------eeEEEEEecCCCChHHHHHhhhcCCChhhh------------cH---------------------------
Q 047286 505 ---------EHTVALVGENGNGKSTVISLAERFHNPEQV------------IY--------------------------- 536 (632)
Q Consensus 505 ---------~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~--------------------------- 536 (632)
++++|||||||||||||+++|.|+|+|++. ..
T Consensus 352 ~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~ 431 (585)
T TIGR01192 352 FDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRL 431 (585)
T ss_pred cceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhc
Confidence 338999999999999999999999988430 00
Q ss_pred ------------HHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 537 ------------SWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 537 ------------~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
+....++++++.++|+|+||.+||+|.+|||||||||+||||+++
T Consensus 432 ~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~ 511 (585)
T TIGR01192 432 GREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVK 511 (585)
T ss_pred CCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHH
Confidence 001124678999999999999999999999999999999999766
Q ss_pred ------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhh
Q 047286 582 ------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 ------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
|++|||+++++.||+|++|++|+|+|.|+|+||+++ +|.|+++++.|.
T Consensus 512 ~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (585)
T TIGR01192 512 NAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK-DGRFYKLLRRSG 571 (585)
T ss_pred HHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC-CChHHHHHHhCc
Confidence 788999999999999999999999999999999997 999999998763
No 32
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7e-39 Score=387.81 Aligned_cols=280 Identities=26% Similarity=0.358 Sum_probs=214.6
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHH-------------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKKK------------- 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~~------------- 414 (632)
|.+.+|+++|++.++..+...+..++..++.++++++++|+. |+|+++++++.|+++...++..++
T Consensus 154 ~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~ 233 (1466)
T PTZ00265 154 SKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNN 233 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999988 999999998888876544322110
Q ss_pred ---------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcC----
Q 047286 415 ---------------------------NYERL---------------------------HINAFCFFIGSKLVEHG---- 436 (632)
Q Consensus 415 ---------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g---- 436 (632)
.+.+. ...++++|+|++++..|
T Consensus 234 ~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~ 313 (1466)
T PTZ00265 234 NTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQ 313 (1466)
T ss_pred HHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 00000 12446789999999886
Q ss_pred ----CcCHHHHHHHHHHH--HHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccEEE------
Q 047286 437 ----DATFGEVFKFLSEF--GCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDIVF------ 504 (632)
Q Consensus 437 ----~~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~f------ 504 (632)
.+++|.+++++... ..+.+.........++++..+++|++++++.+++.+... .+..++.. +.|+|
T Consensus 314 ~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~-~~~~~~~~-~~I~~~nVsf~ 391 (1466)
T PTZ00265 314 QPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENND-DGKKLKDI-KKIQFKNVRFH 391 (1466)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CCccCCCC-CcEEEEEEEEE
Confidence 47788887765322 222234445556778889999999999999877643211 11111110 12222
Q ss_pred -------------------eeEEEEEecCCCChHHHHHhhhcCCChhh----h---------cHHH--------------
Q 047286 505 -------------------EHTVALVGENGNGKSTVISLAERFHNPEQ----V---------IYSW-------------- 538 (632)
Q Consensus 505 -------------------~~~vaIVG~SGsGKSTL~~ll~r~y~~~~----~---------~~~~-------------- 538 (632)
++++|||||||||||||+++|+|+|+|++ + ...+
T Consensus 392 Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~L 471 (1466)
T PTZ00265 392 YDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLL 471 (1466)
T ss_pred cCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccc
Confidence 33899999999999999999999999843 0 0000
Q ss_pred --------------------------------------------------------------------------------
Q 047286 539 -------------------------------------------------------------------------------- 538 (632)
Q Consensus 539 -------------------------------------------------------------------------------- 538 (632)
T Consensus 472 F~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~ 551 (1466)
T PTZ00265 472 FSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVD 551 (1466)
T ss_pred hhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHH
Confidence
Q ss_pred --HHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------------------
Q 047286 539 --IIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------------------- 581 (632)
Q Consensus 539 --~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------------------- 581 (632)
...++++||.+||+||||.||++|.+||||||||||||||+++
T Consensus 552 a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~ 631 (1466)
T PTZ00265 552 VSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENR 631 (1466)
T ss_pred HHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCC
Confidence 0114568999999999999999999999999999999999655
Q ss_pred --hccccchhhhhcCCEEEEEeCC-----------------------------------------------eEeeecChH
Q 047286 582 --CGCGSPPYHYKNADITSVVKNG-----------------------------------------------VIAEKGRHD 612 (632)
Q Consensus 582 --~~iahrl~~~~~aD~I~vl~~G-----------------------------------------------~ive~G~h~ 612 (632)
|+||||+++++.||+|+||++| +|+|+|||+
T Consensus 632 TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~ 711 (1466)
T PTZ00265 632 ITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHD 711 (1466)
T ss_pred EEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccccccccccccccccccccccCCceeEeeCCHH
Confidence 7899999999999999999986 599999999
Q ss_pred HHhccCCchhHHHHHhhh
Q 047286 613 ALMKITDGTYASLTALHM 630 (632)
Q Consensus 613 eL~~~~~g~y~~l~~~~~ 630 (632)
||+++++|.|+.|++.|.
T Consensus 712 ~L~~~~~g~y~~l~~~q~ 729 (1466)
T PTZ00265 712 ALMKNKNGIYYTMINNQK 729 (1466)
T ss_pred HHHhccCCcHHHHHhhhc
Confidence 999844999999998773
No 33
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2e-38 Score=356.14 Aligned_cols=282 Identities=24% Similarity=0.306 Sum_probs=208.3
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHhH------H-----
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIA-FTA-WKLAFITLAVPSLTIAEGYLKKK------K----- 414 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~-~~~-~~l~lv~l~~~~l~~~~~~~~~~------~----- 414 (632)
.|++.+|+++|++.++..+...+..++..++.++++++++ +.. |+++++++++.|+.+...+...+ +
T Consensus 92 ~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~ 171 (569)
T PRK10789 92 TGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAA 171 (569)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4999999999999999888777777777766555555444 344 99988887777766543321111 0
Q ss_pred -----------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCc
Q 047286 415 -----------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDA 438 (632)
Q Consensus 415 -----------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~ 438 (632)
.+.+. ....+++++|++++..|.+
T Consensus 172 ~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~l 251 (569)
T PRK10789 172 FSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSL 251 (569)
T ss_pred HHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 00000 1123456778899999999
Q ss_pred CHHHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCC------CC---------------C
Q 047286 439 TFGEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDG------MT---------------P 495 (632)
Q Consensus 439 s~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~------~~---------------~ 495 (632)
++|.++++..... ..++.........+..+..+.+|+.++++.+++........ .. .
T Consensus 252 t~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~I~~~~v~~~y~~~~~~~l 331 (569)
T PRK10789 252 TLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPVPEGRGELDVNIRQFTYPQTDHPAL 331 (569)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCcEEEEEEEEECCCCCCccc
Confidence 9999998874333 33455666777788899999999999998765432110000 00 0
Q ss_pred CcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------------------------------------
Q 047286 496 STVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------------------------------------ 533 (632)
Q Consensus 496 ~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------------------------------------ 533 (632)
.+.+-+|+-++++|||||||||||||+++|.|+|+|++
T Consensus 332 ~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~ 411 (569)
T PRK10789 332 ENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIAL 411 (569)
T ss_pred cCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhc
Confidence 00111223334899999999999999999999999843
Q ss_pred ---------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 534 ---------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 534 ---------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
++.+....++++++.++|+||||.+||+|.+|||||||||+||||+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~ 491 (569)
T PRK10789 412 GRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQIL 491 (569)
T ss_pred CCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHH
Confidence 000011225678999999999999999999999999999999999766
Q ss_pred ------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhh
Q 047286 582 ------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 ------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
+++|||+++++.||+|++|++|+|+|+|+|+||+++ +|.|+++++.|.
T Consensus 492 ~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 551 (569)
T PRK10789 492 HNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQ 551 (569)
T ss_pred HHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhh
Confidence 788999999999999999999999999999999997 999999998764
No 34
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.8e-37 Score=348.68 Aligned_cols=281 Identities=28% Similarity=0.386 Sum_probs=210.5
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH------HH------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------KN------ 415 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------~~------ 415 (632)
|++.+|+++|++.++..+...+..++..++.+++.+++++.. |.+++++++..|+.+...++..+ +.
T Consensus 115 g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 194 (576)
T TIGR02204 115 GEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIA 194 (576)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888888888877777777665 88877776666654433221111 00
Q ss_pred ----------------------------HHHH---------------------------HHHHHHHhhhhHHhhcCCcCH
Q 047286 416 ----------------------------YERL---------------------------HINAFCFFIGSKLVEHGDATF 440 (632)
Q Consensus 416 ----------------------------~~~~---------------------------~~~~~~~~~g~~~v~~g~~s~ 440 (632)
+.+. ...++++++|++++.+|.+++
T Consensus 195 ~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~ 274 (576)
T TIGR02204 195 DAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSA 274 (576)
T ss_pred HHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 0000 011234567889999999999
Q ss_pred HHHHHHHH--HHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCC-CCC--------C----------------
Q 047286 441 GEVFKFLS--EFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSS-KDG--------M---------------- 493 (632)
Q Consensus 441 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~-~~~--------~---------------- 493 (632)
|.++++.. .....++.........+..+..+.+|+.++++.+++.+... ... .
T Consensus 275 g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~ 354 (576)
T TIGR02204 275 GTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQP 354 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCc
Confidence 99888773 33334566777778888999999999999987654421110 000 0
Q ss_pred CCCcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcH-------------------------
Q 047286 494 TPSTVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIY------------------------- 536 (632)
Q Consensus 494 ~~~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~------------------------- 536 (632)
..++++-+|+-+++++|||+||||||||+++|+|+|+|++ +..
T Consensus 355 iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni 434 (576)
T TIGR02204 355 ALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENI 434 (576)
T ss_pred cccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHH
Confidence 0011112333445899999999999999999999999843 000
Q ss_pred --------------HHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------
Q 047286 537 --------------SWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------- 581 (632)
Q Consensus 537 --------------~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------- 581 (632)
+....++++++.++|+|+||.+||+|.+|||||||||+||||+++
T Consensus 435 ~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~ 514 (576)
T TIGR02204 435 RYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQL 514 (576)
T ss_pred hcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHH
Confidence 011125678999999999999999999999999999999999765
Q ss_pred --------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhh
Q 047286 582 --------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHM 630 (632)
Q Consensus 582 --------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~ 630 (632)
|+||||++.++.||+|++|++|+++|.|+|++|+++ ++.|++|++.|.
T Consensus 515 i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~-~~~~~~l~~~~~ 576 (576)
T TIGR02204 515 VQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK-GGLYARLARLQF 576 (576)
T ss_pred HHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc-CChHHHHHhhcC
Confidence 789999999999999999999999999999999997 999999998763
No 35
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=318.76 Aligned_cols=171 Identities=25% Similarity=0.361 Sum_probs=128.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc--------------------HH---hh-cceEEEcccCcc-cc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP--------------------EA---EQ-EKIGLVSKEPIF-LF 139 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~--------------------~~---~r-~~i~~v~Q~~~~-~~ 139 (632)
.+||+|++||.+||||+||||||-..+.++++..+++ .+ +| .+|+++||+|.- ++
T Consensus 28 ~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQEPMtSLN 107 (534)
T COG4172 28 GISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQEPMTSLN 107 (534)
T ss_pred cceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEecccccccC
Confidence 3999999999999999999999998887765432211 11 22 369999999952 11
Q ss_pred ccccccc----cccc--C-CCCCCHHHHHHHHHHccch-------hhHhhCCccccccc-----------------ccCC
Q 047286 140 CDFNEGQ----YIPY--G-KQNASDEHIRPAVQLANAE-------KSIDKLPLGLDTVV-----------------ATNA 188 (632)
Q Consensus 140 ~~~~~~~----~i~~--~-~~~~~~~~~~~~~~~~~l~-------~~i~~l~~g~~~~v-----------------~ts~ 188 (632)
.-.+... -+.+ + ......+++.+.++.+++. .+..+|++|..++| +|.+
T Consensus 108 Pl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTA 187 (534)
T COG4172 108 PLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTA 187 (534)
T ss_pred cHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcch
Confidence 1111000 1111 1 1123356677788887753 34455667888777 3899
Q ss_pred CCHHHHHHHHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 189 VDAQSERIVQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 189 LD~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
||...+.+|.+.|+++.+ +..+++||||+..++. ||||+||.+|+++|.|+.++++..|.++|.+..
T Consensus 188 LDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t~~lF~~PqHpYTr~L 257 (534)
T COG4172 188 LDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVETGTTETLFAAPQHPYTRKL 257 (534)
T ss_pred hhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcHHHHhhCCCChHHHHH
Confidence 999999999999999864 7899999999999986 999999999999999999999999999998754
No 36
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.8e-38 Score=352.03 Aligned_cols=252 Identities=33% Similarity=0.525 Sum_probs=226.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++.+|+++++..++.+.+++..++..+..++.++.+.|++.|
T Consensus 300 l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 379 (709)
T COG2274 300 LAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALIL 379 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 467899999999999999999999999999999999999944
Q ss_pred ------------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 047286 44 ------------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINPY 82 (632)
Q Consensus 44 ------------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~ 82 (632)
.+.+++|++ ...+..+++.+.|.+|+.++++.++|.+..
T Consensus 380 ~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~ 459 (709)
T COG2274 380 NTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGD 459 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 456777764 345778999999999999999998874321
Q ss_pred C-----------------------------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc------------
Q 047286 83 D-----------------------------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP------------ 121 (632)
Q Consensus 83 ~-----------------------------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~------------ 121 (632)
. .++|++|++||++||+|+||||||||+|++.| +|.|
T Consensus 460 ~~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~g--ly~p~~G~I~~dg~dl 537 (709)
T COG2274 460 KTLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLG--LYKPQQGRILLDGVDL 537 (709)
T ss_pred cccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhc--CCCCCCceEEECCEeH
Confidence 1 01999999999999999999999999999984 4433
Q ss_pred -----HHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc------------
Q 047286 122 -----EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV------------ 184 (632)
Q Consensus 122 -----~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v------------ 184 (632)
..+|++||||+||+.+|++++++ |+.++.++.+.|++.++++.+++++++.++|.||+|.+
T Consensus 538 ~~i~~~~lR~~ig~V~Q~~~Lf~gSI~e--Ni~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQr 615 (709)
T COG2274 538 NDIDLASLRRQVGYVLQDPFLFSGSIRE--NIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQR 615 (709)
T ss_pred HhcCHHHHHhheeEEcccchhhcCcHHH--HHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHH
Confidence 34899999999999999999999 79999999999999999999999999999999999988
Q ss_pred --------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHh
Q 047286 185 --------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 185 --------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~ 244 (632)
+||+||+++++.+.+.|.++..++|+|+|||++..+++||||+||++|+|+++|+|+|++
T Consensus 616 QrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 616 QRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 399999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHH
Q 047286 245 EDPEGAYSQLVRLQ 258 (632)
Q Consensus 245 ~~~~~~~~~~~~~~ 258 (632)
+. ++.|.+++..|
T Consensus 696 ~~-~g~y~~l~~~q 708 (709)
T COG2274 696 AQ-GGLYARLYQQQ 708 (709)
T ss_pred Hh-cChHHHHHhcc
Confidence 88 88898887643
No 37
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.6e-37 Score=318.47 Aligned_cols=203 Identities=29% Similarity=0.324 Sum_probs=144.1
Q ss_pred HHhhhhHHhhcCCcCHHHHHHHH--HHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccE
Q 047286 425 CFFIGSKLVEHGDATFGEVFKFL--SEFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVRGDI 502 (632)
Q Consensus 425 ~~~~g~~~v~~g~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I 502 (632)
+.+.|..=+..|.+++++++... ......++..+.....+...+..-....+...+....... ...++....+.|
T Consensus 276 im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~---~~~~i~~~~~~I 352 (591)
T KOG0057|consen 276 IMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE---AALPIELFGGSI 352 (591)
T ss_pred HHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh---ccCCcccCCCcE
Confidence 34455555677788888876554 2222223444444444555555444444433221111110 000111112334
Q ss_pred EE-----------------------eeEEEEEecCCCChHHHHHhhhcCCChhh--------hc----------------
Q 047286 503 VF-----------------------EHTVALVGENGNGKSTVISLAERFHNPEQ--------VI---------------- 535 (632)
Q Consensus 503 ~f-----------------------~~~vaIVG~SGsGKSTL~~ll~r~y~~~~--------~~---------------- 535 (632)
+| +++|||||+|||||||++++|+||||... ++
T Consensus 353 ~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d~sG~I~IdG~dik~~~~~SlR~~Ig~VPQ 432 (591)
T KOG0057|consen 353 EFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFDYSGSILIDGQDIKEVSLESLRQSIGVVPQ 432 (591)
T ss_pred EEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhccCCcEEECCeeHhhhChHHhhhheeEeCC
Confidence 44 44899999999999999999999998421 00
Q ss_pred --------------------------HHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------
Q 047286 536 --------------------------YSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------- 581 (632)
Q Consensus 536 --------------------------~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------- 581 (632)
......++||.|++||+||+|.|||+|..||||||||++||||++|
T Consensus 433 d~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~D 512 (591)
T KOG0057|consen 433 DSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLD 512 (591)
T ss_pred cccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEec
Confidence 0111237789999999999999999999999999999999999887
Q ss_pred ---------------------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhhhc
Q 047286 582 ---------------------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALHMS 631 (632)
Q Consensus 582 ---------------------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~~~ 631 (632)
|.|+||++++++||+|+|+|+|++.|+|||+||+++ .+.|+++|..|..
T Consensus 513 EaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~-s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 513 EATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAP-SELYADLWTTQTS 588 (591)
T ss_pred CcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhh-hhHHHHHhccccc
Confidence 899999999999999999999999999999999995 9999999988764
No 38
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-36 Score=320.26 Aligned_cols=254 Identities=33% Similarity=0.437 Sum_probs=225.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++++|++.++.+.++...++.++++.+.+.++++.+-+.+.|
T Consensus 147 lit~PlIPlfMilvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflS 226 (559)
T COG4988 147 LITAPLIPLFMILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLS 226 (559)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999955
Q ss_pred ------------------------C-Ccc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 047286 44 ------------------------L-EDM-----------------PLGQTSLNVNAFAAGQAAACKMFETIERIPKINP 81 (632)
Q Consensus 44 ------------------------~-~~~-----------------~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 81 (632)
. |.+ |+.+++..+|.-+.|.+|+++++.+++.+.+..+
T Consensus 227 s~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~ 306 (559)
T COG4988 227 SAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPG 306 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCC
Confidence 1 232 4445677899999999999999999987664221
Q ss_pred CC-----------------------------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC--------------
Q 047286 82 YD-----------------------------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF-------------- 118 (632)
Q Consensus 82 ~~-----------------------------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~-------------- 118 (632)
.. .++||++++|+.++|||+||||||||+++|.|+..
T Consensus 307 ~~~~~~~~~~~~~ei~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~ 386 (559)
T COG4988 307 SGEKAEVANEPPIEISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLR 386 (559)
T ss_pred CccccccccCCCceeeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCcccc
Confidence 00 12999999999999999999999999999986532
Q ss_pred -CCcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-------------
Q 047286 119 -YAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV------------- 184 (632)
Q Consensus 119 -~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v------------- 184 (632)
.++..+|++++||+|+|++|.+|+++ |+.+++++.+++++.++++.+++.+++.. |+|+++.+
T Consensus 387 ~l~~~~~~k~i~~v~Q~p~lf~gTire--Ni~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~Q 463 (559)
T COG4988 387 DLSPEAWRKQISWVSQNPYLFAGTIRE--NILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQ 463 (559)
T ss_pred ccCHHHHHhHeeeeCCCCccccccHHH--HhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHH
Confidence 23456899999999999999999999 79999999999999999999999999999 99999887
Q ss_pred -------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhc
Q 047286 185 -------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 185 -------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+|++||.++++.+.+.|.++.+++|++++||++..++.||+|++|++|++++.|+|+++.+
T Consensus 464 RlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 464 RLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred HHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhh
Confidence 2999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCcHHHHHHHHHh
Q 047286 246 DPEGAYSQLVRLQE 259 (632)
Q Consensus 246 ~~~~~~~~~~~~~~ 259 (632)
+ ++.|++++..|.
T Consensus 544 ~-~~~y~~l~~~q~ 556 (559)
T COG4988 544 K-QGLYANLLKQQE 556 (559)
T ss_pred c-CcHHHHHHHHHh
Confidence 7 788999887654
No 39
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-34 Score=324.15 Aligned_cols=268 Identities=21% Similarity=0.204 Sum_probs=192.4
Q ss_pred hhHHHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH------H------
Q 047286 349 GAVGARLSTDASAVRSVVGD-ALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------K------ 414 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~-~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------~------ 414 (632)
+...+++++|++.+++.+.. .+..++..++.++.. ++++.. |.+++++++..|+++...++..+ +
T Consensus 98 ~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 176 (544)
T TIGR01842 98 KIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYL-LVCFLLHPWIGILALGGAVVLVGLALLNNRATKKPLKEATEAS 176 (544)
T ss_pred cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 67788999999999998876 455566665555444 344444 88887776655554332211100 0
Q ss_pred ----------------------------HHHHH---------------------------HHHHHHHhhhhHHhhcCCcC
Q 047286 415 ----------------------------NYERL---------------------------HINAFCFFIGSKLVEHGDAT 439 (632)
Q Consensus 415 ----------------------------~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s 439 (632)
.+.+. ....+++++|++++..|.++
T Consensus 177 ~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~it 256 (544)
T TIGR01842 177 IRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLGAYLAIDGEIT 256 (544)
T ss_pred HHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 00000 11234567899999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCC-----C---------------CCCc
Q 047286 440 FGEVFKFLSEF--GCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDG-----M---------------TPST 497 (632)
Q Consensus 440 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~-----~---------------~~~~ 497 (632)
+|++++++... ...++.........++.+..+.+|+.++++.+++.+...... . ...+
T Consensus 257 ~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~ 336 (544)
T TIGR01842 257 PGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAMPLPEPEGHLSVENVTIVPPGGKKPTLRG 336 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCCCCCeEEEEEEEEEcCCCCcccccc
Confidence 99999887433 334566777777888999999999999997765432110000 0 0011
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh-------------------------------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------------------------------------- 534 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------------------------------------- 534 (632)
.+-+|+-++++|||||||||||||+++|+|+|+|++.
T Consensus 337 ~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~ 416 (544)
T TIGR01842 337 ISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFG 416 (544)
T ss_pred ceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccC
Confidence 1112333448999999999999999999999988430
Q ss_pred --------cHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 535 --------IYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 535 --------~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
+.+....++++++.++|+|+||.+||+|.+|||||||||+||||+++
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~ 496 (544)
T TIGR01842 417 ENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANA 496 (544)
T ss_pred CCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHH
Confidence 00011225679999999999999999999999999999999999665
Q ss_pred -----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++|||+++++.||+|++|++|+++|+|+|+||+++
T Consensus 497 l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 497 IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 788999999999999999999999999999999863
No 40
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.6e-35 Score=335.00 Aligned_cols=255 Identities=25% Similarity=0.346 Sum_probs=213.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++++|+++++..++.++.++..++.++..++.++.+.|.++|
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 170 LGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777778888999999999999999999999999954
Q ss_pred -----------------------CCcccHHH--------------------------HHHHHHHHHHHHHHHHHHHHHhc
Q 047286 44 -----------------------LEDMPLGQ--------------------------TSLNVNAFAAGQAAACKMFETIE 74 (632)
Q Consensus 44 -----------------------~~~~~~~~--------------------------~~~~~~~~~~~~~a~~ri~~~~~ 74 (632)
.+.+++|. +...++.++++++|++|+.++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 329 (588)
T PRK11174 250 SAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLE 329 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 12222221 22335678999999999999997
Q ss_pred cCCCCC-------C--CC-------------------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC---------
Q 047286 75 RIPKIN-------P--YD-------------------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFR--------- 117 (632)
Q Consensus 75 ~~~~~~-------~--~~-------------------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~--------- 117 (632)
.+++.. + .. +.+||++++|+++||+||||||||||+++|+++-
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~p~~G~I~i~ 409 (588)
T PRK11174 330 TPLAHPQQGEKELASNDPVTIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFLPYQGSLKIN 409 (588)
T ss_pred CCCcccCCCccccCCCCCceEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCcEEEEC
Confidence 653210 0 00 0189999999999999999999999999998442
Q ss_pred -----CCCcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc--------
Q 047286 118 -----FYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-------- 184 (632)
Q Consensus 118 -----~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-------- 184 (632)
.+++..+|++|+||+|+|++|++|+++ |+.+++++.+++++.++++.+++++++.++|+|++|.+
T Consensus 410 g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~e--NI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LS 487 (588)
T PRK11174 410 GIELRELDPESWRKHLSWVGQNPQLPHGTLRD--NVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLS 487 (588)
T ss_pred CEecccCCHHHHHhheEEecCCCcCCCcCHHH--HhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCC
Confidence 112234788999999999999999998 79999888999999999999999999999999999988
Q ss_pred ------------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecCh
Q 047286 185 ------------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTH 240 (632)
Q Consensus 185 ------------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~ 240 (632)
+||+||+++++.+.+.|+++.+++|+|+|||+++.++.||+|++|++|+++++|+|
T Consensus 488 GGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~ 567 (588)
T PRK11174 488 VGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDY 567 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCH
Confidence 29999999999999999999889999999999999999999999999999999999
Q ss_pred hHHhcCCCcHHHHHHHHHh
Q 047286 241 DELIEDPEGAYSQLVRLQE 259 (632)
Q Consensus 241 ~el~~~~~~~~~~~~~~~~ 259 (632)
+|++++ ++.|.+++..|.
T Consensus 568 ~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 568 AELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred HHHHhc-chHHHHHHHHhh
Confidence 999876 678888886653
No 41
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-37 Score=345.75 Aligned_cols=167 Identities=21% Similarity=0.310 Sum_probs=125.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------C-----------------c-H---Hhh-cceEEEcccC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------A-----------------P-E---AEQ-EKIGLVSKEP 135 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------~-----------------~-~---~~r-~~i~~v~Q~~ 135 (632)
.+||+|++||+++|+||||||||||+++|+|+... + + . ..| +.||||+|+|
T Consensus 34 ~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ig~v~Q~~ 113 (623)
T PRK10261 34 NLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGADMAMIFQEP 113 (623)
T ss_pred eeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccccCCHHHHHHHhCCCEEEEEeCc
Confidence 39999999999999999999999999999865211 0 0 0 122 4699999998
Q ss_pred c-ccccccccccccccCCC---CCC----HHHHHHHHHHccch-------hhHhhCCcccccccc---------------
Q 047286 136 I-FLFCDFNEGQYIPYGKQ---NAS----DEHIRPAVQLANAE-------KSIDKLPLGLDTVVA--------------- 185 (632)
Q Consensus 136 ~-~~~~~~~~~~~i~~~~~---~~~----~~~~~~~~~~~~l~-------~~i~~l~~g~~~~v~--------------- 185 (632)
. .++...+..+|+.++.. ... .+++.++++..++. ..+.+||+|++++++
T Consensus 114 ~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllD 193 (623)
T PRK10261 114 MTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIAD 193 (623)
T ss_pred hhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 2 12232333335554211 111 24567788888873 456789999998883
Q ss_pred --cCCCCHHHHHHHHHHHHHHh-C-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 186 --TNAVDAQSERIVQAAMVKLV-T-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 186 --ts~LD~~~~~~i~~~l~~~~-~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
|++||+.+++.+.+.++++. + +.|+|+|||++..+.. ||||++|++|++++.|+++++...+...|
T Consensus 194 EPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~ 264 (623)
T PRK10261 194 EPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGSVEQIFHAPQHPY 264 (623)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeecccCCHHHhhcCCCChh
Confidence 99999999999999999985 3 7899999999998865 99999999999999999998875543333
No 42
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.5e-35 Score=331.56 Aligned_cols=252 Identities=37% Similarity=0.582 Sum_probs=219.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|++++...++.++.++...+.++..++.++.+.|.+.|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (567)
T COG1132 160 LILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLA 239 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688888888888888999999999999999999999954
Q ss_pred -----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCC--
Q 047286 44 -----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINP-- 81 (632)
Q Consensus 44 -----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~-- 81 (632)
.+.+++|++ ...+..++++.+|++|++++++.++++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~ 319 (567)
T COG1132 240 PLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPP 319 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Confidence 222344432 34467789999999999999998664211
Q ss_pred ------------------CC------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH---------------
Q 047286 82 ------------------YD------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE--------------- 122 (632)
Q Consensus 82 ------------------~~------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~--------------- 122 (632)
++ +++||++++||.+|||||||||||||+++|. ++|+|.
T Consensus 320 ~~~~~~~~~I~f~~vsf~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~--r~~~~~~G~I~idg~dI~~i~ 397 (567)
T COG1132 320 DPLKDTIGSIEFENVSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLL--RLYDPTSGEILIDGIDIRDIS 397 (567)
T ss_pred CCCCCCCCeEEEEEEEEEcCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHh--ccCCCCCCeEEECCEehhhcC
Confidence 01 1299999999999999999999999999998 666552
Q ss_pred --HhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc----------------
Q 047286 123 --AEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV---------------- 184 (632)
Q Consensus 123 --~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v---------------- 184 (632)
.+|++|++|+|++++|.+|+.+ |+.+++++.+++++.++++.+++++++.++|+|++|.+
T Consensus 398 ~~~lr~~I~~V~Qd~~LF~~TI~~--NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrla 475 (567)
T COG1132 398 LDSLRKRIGIVSQDPLLFSGTIRE--NIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLA 475 (567)
T ss_pred HHHHHHhccEEcccceeecccHHH--HHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHH
Confidence 3789999999999999999998 89999988999999999999999999999999999988
Q ss_pred ----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 185 ----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 185 ----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+||+||+++++.+++.+.++.+++|+++|+|++++++.||+|+||++|+|++.|+|+||++. +
T Consensus 476 iARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~ 554 (567)
T COG1132 476 IARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-G 554 (567)
T ss_pred HHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-C
Confidence 39999999999999999988888999999999999999999999999999999999999988 8
Q ss_pred cHHHHHHHHHh
Q 047286 249 GAYSQLVRLQE 259 (632)
Q Consensus 249 ~~~~~~~~~~~ 259 (632)
+.|.++++.+.
T Consensus 555 g~y~~l~~~~~ 565 (567)
T COG1132 555 GLYARLYQAQG 565 (567)
T ss_pred CHHHHHHHHhh
Confidence 89999987653
No 43
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.5e-34 Score=348.44 Aligned_cols=203 Identities=25% Similarity=0.224 Sum_probs=157.9
Q ss_pred HhhhhHHhhcCCcCHHHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCC------CC----
Q 047286 426 FFIGSKLVEHGDATFGEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKD------GM---- 493 (632)
Q Consensus 426 ~~~g~~~v~~g~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~------~~---- 493 (632)
+++|++++..|.++++.+++++..+. ..++..+......+..+..+.+|+.++++.+++....... ..
T Consensus 540 ~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~~~~~~~~~I~~~~ 619 (1495)
T PLN03232 540 VSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNPPLQPGAPAISIKN 619 (1495)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccCCcCCCCCcEEEEe
Confidence 56788888899999999998874333 3345566666678889999999999999765432111000 00
Q ss_pred ------------CCCcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh----------------------------
Q 047286 494 ------------TPSTVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------------------------- 533 (632)
Q Consensus 494 ------------~~~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------------------------- 533 (632)
...+++-+|+-++++|||||||||||||+++|.|+|+|.+
T Consensus 620 vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI 699 (1495)
T PLN03232 620 GYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENI 699 (1495)
T ss_pred eEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHh
Confidence 0011111233345899999999999999999999999853
Q ss_pred ----------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 534 ----------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 534 ----------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
++......++++++..||+|+||.|||+|.+||||||||||||||+++
T Consensus 700 ~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I 779 (1495)
T PLN03232 700 LFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQV 779 (1495)
T ss_pred hcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHH
Confidence 111111225678899999999999999999999999999999999655
Q ss_pred --------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhh
Q 047286 582 --------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 582 --------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~ 629 (632)
|++|||+++++.||+|++|++|+|+|+|+|+||+++ ++.|+++++.+
T Consensus 780 ~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~-~~~~~~l~~~~ 840 (1495)
T PLN03232 780 FDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS-GSLFKKLMENA 840 (1495)
T ss_pred HHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-chhHHHHHHhc
Confidence 789999999999999999999999999999999987 89999998754
No 44
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1e-33 Score=316.27 Aligned_cols=234 Identities=20% Similarity=0.186 Sum_probs=167.6
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHhH------HH----
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEG-YLKKK------KN---- 415 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~-~~~~~------~~---- 415 (632)
.|++++|+++|++.+++.+...+..++..++.+++.+++++.. |++++++++..|++.... ++..+ +.
T Consensus 109 ~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (529)
T TIGR02868 109 TGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARL 188 (529)
T ss_pred hhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 3999999999999999999988888888888887777777766 999888776655543221 11100 00
Q ss_pred ------------------------------HHHH---------------------------HHHHHHHhhhhHHhhcCCc
Q 047286 416 ------------------------------YERL---------------------------HINAFCFFIGSKLVEHGDA 438 (632)
Q Consensus 416 ------------------------------~~~~---------------------------~~~~~~~~~g~~~v~~g~~ 438 (632)
+.+. ....+++++|+.++..|.+
T Consensus 189 ~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 268 (529)
T TIGR02868 189 RSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGALWAGGPAVADGTL 268 (529)
T ss_pred HHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 0000 1123456788899999999
Q ss_pred CHHHHHHHHHHH--HHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCC-CCCCCcccccEEEe----------
Q 047286 439 TFGEVFKFLSEF--GCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKD-GMTPSTVRGDIVFE---------- 505 (632)
Q Consensus 439 s~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~-~~~~~~~~g~I~f~---------- 505 (632)
++|.+++++... ...++.........++.+..+.+|+.++++.+++.+.+... .....+..++|+|+
T Consensus 269 t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~ 348 (529)
T TIGR02868 269 APATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPGSP 348 (529)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCCCC
Confidence 999998887432 22345556666778888999999999999876643211100 00001112234443
Q ss_pred -------------eEEEEEecCCCChHHHHHhhhcCCChhh------------h--------------------------
Q 047286 506 -------------HTVALVGENGNGKSTVISLAERFHNPEQ------------V-------------------------- 534 (632)
Q Consensus 506 -------------~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~-------------------------- 534 (632)
+++|||||||||||||+++|+|+|+|++ +
T Consensus 349 ~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI 428 (529)
T TIGR02868 349 PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNL 428 (529)
T ss_pred ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHH
Confidence 3899999999999999999999999854 1
Q ss_pred ------------cHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh
Q 047286 535 ------------IYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY 581 (632)
Q Consensus 535 ------------~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~ 581 (632)
+.+....++++||.+||+||||.|||+|.+||||||||||||||+++
T Consensus 429 ~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~ 487 (529)
T TIGR02868 429 RLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLA 487 (529)
T ss_pred hccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhc
Confidence 01111226789999999999999999999999999999999999876
No 45
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.3e-34 Score=322.66 Aligned_cols=162 Identities=22% Similarity=0.285 Sum_probs=122.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------------cH---Hhh-cceEEEcccCcc-cc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------------PE---AEQ-EKIGLVSKEPIF-LF 139 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------------~~---~~r-~~i~~v~Q~~~~-~~ 139 (632)
.+||++++||+++|+||||||||||+++|.|+.... .. ..+ ++++|++|++.. +.
T Consensus 27 ~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~ 106 (529)
T PRK15134 27 DVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEPMVSLN 106 (529)
T ss_pred ceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCchhhcC
Confidence 499999999999999999999999999998664310 00 112 469999999742 22
Q ss_pred ccccccccccc------CCCC-CCHHHHHHHHHHccch-------hhHhhCCcccccccc-----------------cCC
Q 047286 140 CDFNEGQYIPY------GKQN-ASDEHIRPAVQLANAE-------KSIDKLPLGLDTVVA-----------------TNA 188 (632)
Q Consensus 140 ~~~~~~~~i~~------~~~~-~~~~~~~~~~~~~~l~-------~~i~~l~~g~~~~v~-----------------ts~ 188 (632)
......+++.+ +... ...+++.++++.+++. ..+.+||+|++++++ |++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~ 186 (529)
T PRK15134 107 PLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTA 186 (529)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCc
Confidence 22222223321 1111 1235567788888874 346789999998883 999
Q ss_pred CCHHHHHHHHHHHHHHh-C-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 189 VDAQSERIVQAAMVKLV-T-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 189 LD~~~~~~i~~~l~~~~-~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
||+.+++.+.+.|+++. + +.|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 187 LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 247 (529)
T PRK15134 187 LDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQNRAATLFSA 247 (529)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeCCHHHHhhC
Confidence 99999999999999985 3 7899999999998865 999999999999999999887644
No 46
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.6e-33 Score=323.58 Aligned_cols=249 Identities=27% Similarity=0.361 Sum_probs=210.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|+++++..++.+..++..++.++..++.++.+.|.+.|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (686)
T TIGR03797 283 ALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLT 362 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667777888889999999999999999999999943
Q ss_pred -----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCCC-
Q 047286 44 -----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINPY- 82 (632)
Q Consensus 44 -----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~- 82 (632)
.+.+++|++ ...+..+++++.+.+|+.++++.+++.+..
T Consensus 363 ~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~ 442 (686)
T TIGR03797 363 VFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK 442 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc
Confidence 344566653 334677899999999999999765432100
Q ss_pred ---------------------C-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC---------------CCCc
Q 047286 83 ---------------------D-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFR---------------FYAP 121 (632)
Q Consensus 83 ---------------------~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~---------------~~~~ 121 (632)
+ +++||+|++||.+||+||||||||||+|+|+|+- .+++
T Consensus 443 ~~~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~ 522 (686)
T TIGR03797 443 TDPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDV 522 (686)
T ss_pred CCCCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCH
Confidence 0 0199999999999999999999999999998441 1234
Q ss_pred HHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------
Q 047286 122 EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV----------------- 184 (632)
Q Consensus 122 ~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v----------------- 184 (632)
..+|++++||+|+|++|.+|+++ |+.++++ .+++++.++++.+++++++.++|.|++|.+
T Consensus 523 ~~lr~~i~~v~Q~~~lf~gTI~e--Ni~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRial 599 (686)
T TIGR03797 523 QAVRRQLGVVLQNGRLMSGSIFE--NIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLI 599 (686)
T ss_pred HHHHhccEEEccCCccCcccHHH--HHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHH
Confidence 45789999999999999999998 7988877 889999999999999999999999999887
Q ss_pred ---------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 185 ---------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 185 ---------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
+||+||+++++.+.+.|+++ ++|+|+|||+++.++.||+|++|++|+|+++|+|+|+++. ++
T Consensus 600 ARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~ 676 (686)
T TIGR03797 600 ARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EG 676 (686)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-Cc
Confidence 29999999999999999886 5899999999999999999999999999999999999876 67
Q ss_pred HHHHHHHH
Q 047286 250 AYSQLVRL 257 (632)
Q Consensus 250 ~~~~~~~~ 257 (632)
.|.++++.
T Consensus 677 ~y~~l~~~ 684 (686)
T TIGR03797 677 LFAQLARR 684 (686)
T ss_pred HHHHHHHh
Confidence 88887754
No 47
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.8e-33 Score=341.11 Aligned_cols=204 Identities=25% Similarity=0.277 Sum_probs=157.7
Q ss_pred HHhhhhHHhhcCCcCHHHHHHHHHHHH--HHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCC----C--CC---
Q 047286 425 CFFIGSKLVEHGDATFGEVFKFLSEFG--CFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSK----D--GM--- 493 (632)
Q Consensus 425 ~~~~g~~~v~~g~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~----~--~~--- 493 (632)
++++|++++..|.++++.+++++..+. ..++..+......+..+..+.+|+.++++.++....+.+ . ..
T Consensus 539 ~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~~~~~~~~~I~~~ 618 (1622)
T PLN03130 539 VVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNPPLEPGLPAISIK 618 (1622)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCCcccCCCCceEEE
Confidence 455788888899999999988774333 234556666677888999999999999875433111000 0 00
Q ss_pred -------------CCCcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh-hc------------------------
Q 047286 494 -------------TPSTVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ-VI------------------------ 535 (632)
Q Consensus 494 -------------~~~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~-~~------------------------ 535 (632)
...+++-+|+-++++|||||||||||||+++|.|+|+|.+ ..
T Consensus 619 nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreN 698 (1622)
T PLN03130 619 NGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDN 698 (1622)
T ss_pred eeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHH
Confidence 0111112334445899999999999999999999998854 10
Q ss_pred -------------HHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------
Q 047286 536 -------------YSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------- 581 (632)
Q Consensus 536 -------------~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------- 581 (632)
......++++++..||+|++|.|||+|.+||||||||||||||+++
T Consensus 699 I~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~ 778 (1622)
T PLN03130 699 ILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQ 778 (1622)
T ss_pred HhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHH
Confidence 1111225678999999999999999999999999999999999654
Q ss_pred ---------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhh
Q 047286 582 ---------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 582 ---------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~ 629 (632)
|++||+++.++.||+|++|++|+|+|+|+|+||+++ ++.|+++++.+
T Consensus 779 I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~-~~~~~~l~~~~ 840 (1622)
T PLN03130 779 VFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNN-GPLFQKLMENA 840 (1622)
T ss_pred HHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhc-chhHHHHHHhc
Confidence 789999999999999999999999999999999987 89999998754
No 48
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.2e-32 Score=307.64 Aligned_cols=253 Identities=23% Similarity=0.174 Sum_probs=180.4
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH-------------
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKK------------- 413 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~------------- 413 (632)
.|++++|+++|++.+++.+...+..++..++.+++.+++++.. |.+++++++..|+.+...+...+
T Consensus 100 ~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 179 (529)
T TIGR02857 100 SGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQAAARKQWAAL 179 (529)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4999999999999999999888888888877777777776666 88888777766655432211110
Q ss_pred ---------------------------HHHHHH---------------------------HHHHHHHhhhhHHhhcCCcC
Q 047286 414 ---------------------------KNYERL---------------------------HINAFCFFIGSKLVEHGDAT 439 (632)
Q Consensus 414 ---------------------------~~~~~~---------------------------~~~~~~~~~g~~~v~~g~~s 439 (632)
+.+.+. ....+++++++..+..|.++
T Consensus 180 ~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t 259 (529)
T TIGR02857 180 SRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYIGFRLLAGDLD 259 (529)
T ss_pred HHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 000000 00112234566677799999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCC------CC---------------CC
Q 047286 440 FGEVFKFLSEF--GCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDG------MT---------------PS 496 (632)
Q Consensus 440 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~------~~---------------~~ 496 (632)
+|.++++.... ...++..........+++..+.+|+.++++.+++........ .. ..
T Consensus 260 ~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~il~ 339 (529)
T TIGR02857 260 LATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKAPVTAAPAPSLEFSGLSVAYPGRRAPALR 339 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCCCCCCCCeEEEEEEEEECCCCCccccc
Confidence 99999877433 233456667777888999999999999997543321110000 00 00
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------h------------------------------
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------V------------------------------ 534 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~------------------------------ 534 (632)
+++-+|+.++++|||||||||||||+++|.|+|+|++ +
T Consensus 340 ~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~ 419 (529)
T TIGR02857 340 PVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLA 419 (529)
T ss_pred ceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhcc
Confidence 0111233334899999999999999999999999843 0
Q ss_pred ---------cHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 535 ---------IYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 535 ---------~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
+.+....++++|+.++|+||||.+||+|.+|||||||||+||||+++
T Consensus 420 ~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~ 499 (529)
T TIGR02857 420 RPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTE 499 (529)
T ss_pred CCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHH
Confidence 01111226789999999999999999999999999999999999766
Q ss_pred -----------hccccchhhhhcCCEEEEE
Q 047286 582 -----------CGCGSPPYHYKNADITSVV 600 (632)
Q Consensus 582 -----------~~iahrl~~~~~aD~I~vl 600 (632)
++||||+++++.||+|+||
T Consensus 500 ~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 500 ALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 7899999999999999986
No 49
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-34 Score=290.47 Aligned_cols=211 Identities=35% Similarity=0.535 Sum_probs=189.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC----------------------------cEEEEeeCCCEEEE
Q 047286 47 MPLGQTSLNVNAFAAGQAAACKMFETIERIPKINPYDN----------------------------RFLQHVPSGTTVAL 98 (632)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~----------------------------~~~~~i~~Ge~~~i 98 (632)
+|+.-.+..+-.+|+...-.+++++++++++++.+... ++||++.+|+.+|+
T Consensus 490 ~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~i~fsnvtF~Y~p~k~vl~disF~v~pGktvAl 569 (790)
T KOG0056|consen 490 MPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGKIEFSNVTFAYDPGKPVLSDISFTVQPGKTVAL 569 (790)
T ss_pred CchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCeEEEEEeEEecCCCCceeecceEEecCCcEEEE
Confidence 45666677788899999999999999999887542110 19999999999999
Q ss_pred EcCCCchHHHHHHHHHhCCCCCc-----------------HHhhcceEEEcccCcccccccccccccccCCCCCCHHHHH
Q 047286 99 VGQSGSGKSTVINLVESFRFYAP-----------------EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIR 161 (632)
Q Consensus 99 vG~sGsGKSTLl~ll~~~~~~~~-----------------~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 161 (632)
|||||+||||+++++- ++++. ..+|++||+||||..+|+.++.. ||.++++.+++|++.
T Consensus 570 VG~SGaGKSTimRlLf--Rffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~y--NIryak~~Asneevy 645 (790)
T KOG0056|consen 570 VGPSGAGKSTIMRLLF--RFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILY--NIRYAKPSASNEEVY 645 (790)
T ss_pred ECCCCCchhHHHHHHH--HHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeee--heeecCCCCChHHHH
Confidence 9999999999999996 55542 23799999999999999999988 799999999999999
Q ss_pred HHHHHccchhhHhhCCccccccc--------------------------------ccCCCCHHHHHHHHHHHHHHhCCce
Q 047286 162 PAVQLANAEKSIDKLPLGLDTVV--------------------------------ATNAVDAQSERIVQAAMVKLVTNQT 209 (632)
Q Consensus 162 ~~~~~~~l~~~i~~l~~g~~~~v--------------------------------~ts~LD~~~~~~i~~~l~~~~~~~t 209 (632)
++++++++++.|..+|+|++|+| +||+||..+++.|+.++.++..++|
T Consensus 646 aAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RT 725 (790)
T KOG0056|consen 646 AAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRT 725 (790)
T ss_pred HHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCc
Confidence 99999999999999999999888 2899999999999999999999999
Q ss_pred EEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHHHHhhh
Q 047286 210 VVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVRLQEGA 261 (632)
Q Consensus 210 viiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~ 261 (632)
.|+|+|+++++-+||.|+++++|+|+|.|+|+|+...+.+.|.++++.|+..
T Consensus 726 tIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa~ 777 (790)
T KOG0056|consen 726 TIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQQAM 777 (790)
T ss_pred eEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHHHhc
Confidence 9999999999999999999999999999999999988889999999876543
No 50
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.3e-33 Score=314.18 Aligned_cols=253 Identities=33% Similarity=0.461 Sum_probs=211.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|+++++..++.+..++..++.++..++.++.+.|.+.|
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T PRK11176 173 VIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISD 252 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777888888899999999999999999999943
Q ss_pred -----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCC--
Q 047286 44 -----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINP-- 81 (632)
Q Consensus 44 -----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~-- 81 (632)
.+.+++|++ ...+..+++++.+.+|+.++++.+++.+.
T Consensus 253 ~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~ 332 (582)
T PRK11176 253 PIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGK 332 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCC
Confidence 234555553 23466788999999999999975433110
Q ss_pred --------------------CC-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------Cc
Q 047286 82 --------------------YD-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------AP 121 (632)
Q Consensus 82 --------------------~~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~ 121 (632)
.. +.+|++|++||.++|+||||||||||+++|+|+-.+ +.
T Consensus 333 ~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~ 412 (582)
T PRK11176 333 RVIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTL 412 (582)
T ss_pred cCCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCH
Confidence 00 128999999999999999999999999999854211 12
Q ss_pred HHhhcceEEEcccCcccccccccccccccCCCC-CCHHHHHHHHHHccchhhHhhCCccccccc----------------
Q 047286 122 EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQN-ASDEHIRPAVQLANAEKSIDKLPLGLDTVV---------------- 184 (632)
Q Consensus 122 ~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v---------------- 184 (632)
..+++.++||||++.+|.+|+++ |+.++.++ .++++++++++.+++++++.++|+|++|.+
T Consensus 413 ~~~~~~i~~v~Q~~~lf~~Ti~~--Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~ 490 (582)
T PRK11176 413 ASLRNQVALVSQNVHLFNDTIAN--NIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIA 490 (582)
T ss_pred HHHHhhceEEccCceeecchHHH--HHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHH
Confidence 34688999999999999999988 79888644 689999999999999999999999999877
Q ss_pred ----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 185 ----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 185 ----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+||+||+++++.+.+.|.++.+++|+|+|||+++.++.||+|++|++|++++.|+|+++++. +
T Consensus 491 LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~ 569 (582)
T PRK11176 491 IARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQ-N 569 (582)
T ss_pred HHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC-C
Confidence 29999999999999999998888999999999999999999999999999999999999877 6
Q ss_pred cHHHHHHHHH
Q 047286 249 GAYSQLVRLQ 258 (632)
Q Consensus 249 ~~~~~~~~~~ 258 (632)
+.|++++..+
T Consensus 570 ~~y~~l~~~~ 579 (582)
T PRK11176 570 GVYAQLHKMQ 579 (582)
T ss_pred ChHHHHHHHH
Confidence 7888887643
No 51
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=310.18 Aligned_cols=158 Identities=16% Similarity=0.250 Sum_probs=117.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEEcccCcccccccccccccccCC--------
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLVSKEPIFLFCDFNEGQYIPYGK-------- 152 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~-------- 152 (632)
.+||+|++|++++|+||||||||||+++|+|+...+... .+..++|++|++.++. ..+..+|+.++.
T Consensus 19 ~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~~~-~~tv~e~l~~~~~~~~~~~~ 97 (530)
T PRK15064 19 NISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFAFE-EFTVLDTVIMGHTELWEVKQ 97 (530)
T ss_pred CCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCcCC-CCcHHHHHHHhhHHHHHHHH
Confidence 399999999999999999999999999999653222111 1356999999986543 222222333211
Q ss_pred --------C----------------------CCCHHHHHHHHHHccchh-----hHhhCCccccccc-------------
Q 047286 153 --------Q----------------------NASDEHIRPAVQLANAEK-----SIDKLPLGLDTVV------------- 184 (632)
Q Consensus 153 --------~----------------------~~~~~~~~~~~~~~~l~~-----~i~~l~~g~~~~v------------- 184 (632)
. ....+++.++++..++.+ .+.+||+|+++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lL 177 (530)
T PRK15064 98 ERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLMSEVAPGWKLRVLLAQALFSNPDIL 177 (530)
T ss_pred HHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCchhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 0 001245667777777642 3678999999888
Q ss_pred ----ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEE-EecChhHHhc
Q 047286 185 ----ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIV-EKGTHDELIE 245 (632)
Q Consensus 185 ----~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~-~~g~~~el~~ 245 (632)
+|++||+.+++.+.+.|.+ .+.|+|++||+++.+.. ||+|++|++|+++ ..|+++++..
T Consensus 178 lLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~ 242 (530)
T PRK15064 178 LLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMADLDYGELRVYPGNYDEYMT 242 (530)
T ss_pred EEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEecCCHHHHHH
Confidence 3999999999999999875 47899999999998865 9999999999994 7888887653
No 52
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.6e-33 Score=320.77 Aligned_cols=246 Identities=35% Similarity=0.527 Sum_probs=206.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++.+|+++++..++.++.++..++.++..++.++.+.|.+.|
T Consensus 308 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (711)
T TIGR00958 308 LINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGY 387 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677778888899999999999999999999999999943
Q ss_pred ------------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCC--
Q 047286 44 ------------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKIN-- 80 (632)
Q Consensus 44 ------------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~-- 80 (632)
.+.+++|++ ...+..+++++++++|++++++.+++.+
T Consensus 388 ~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~ 467 (711)
T TIGR00958 388 LWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLT 467 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 234455543 3346778999999999999998754321
Q ss_pred ----C---------------C-C-------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc------------
Q 047286 81 ----P---------------Y-D-------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP------------ 121 (632)
Q Consensus 81 ----~---------------~-~-------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~------------ 121 (632)
+ + + +++||++++||.++|+||||||||||+++|.|+ ++|
T Consensus 468 ~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl--~~p~~G~I~idg~~i 545 (711)
T TIGR00958 468 GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNL--YQPTGGQVLLDGVPL 545 (711)
T ss_pred CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhc--cCCCCCEEEECCEEH
Confidence 0 0 0 128999999999999999999999999999843 433
Q ss_pred -----HHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc------------
Q 047286 122 -----EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV------------ 184 (632)
Q Consensus 122 -----~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v------------ 184 (632)
..+|++++||+|+|++|.+|+++ |+.++.++.+++++.++++.+++++++.++|+|++|.+
T Consensus 546 ~~~~~~~lr~~i~~v~Q~~~lF~gTIre--NI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQk 623 (711)
T TIGR00958 546 VQYDHHYLHRQVALVGQEPVLFSGSVRE--NIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQK 623 (711)
T ss_pred HhcCHHHHHhhceEEecCccccccCHHH--HHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHH
Confidence 34688999999999999999998 79998877889999999999999999999999999877
Q ss_pred --------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHh
Q 047286 185 --------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 185 --------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~ 244 (632)
+||+||+++++.+.+ ....+++|+|+|||+++.++.||+|++|++|+|+++|+|+|++
T Consensus 624 QRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~ 701 (711)
T TIGR00958 624 QRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLM 701 (711)
T ss_pred HHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHH
Confidence 399999999999998 3334689999999999999999999999999999999999998
Q ss_pred cCCCcHHHHH
Q 047286 245 EDPEGAYSQL 254 (632)
Q Consensus 245 ~~~~~~~~~~ 254 (632)
++ ++.|.++
T Consensus 702 ~~-~~~y~~l 710 (711)
T TIGR00958 702 ED-QGCYKHL 710 (711)
T ss_pred hC-CCchHhc
Confidence 76 5566653
No 53
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.4e-34 Score=317.32 Aligned_cols=159 Identities=18% Similarity=0.275 Sum_probs=120.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC--C-------C-----------------------------------
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF--Y-------A----------------------------------- 120 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--~-------~----------------------------------- 120 (632)
.+||++++|++++|+||||||||||+++|+|+.. . .
T Consensus 18 ~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 97 (520)
T TIGR03269 18 NISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTLEPEEVDFW 97 (520)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccccccccccccccccccchhhh
Confidence 3999999999999999999999999999997631 1 0
Q ss_pred ---c---HHhhcceEEEccc-CcccccccccccccccCCC--CCC----HHHHHHHHHHccchh----hHhhCCcccccc
Q 047286 121 ---P---EAEQEKIGLVSKE-PIFLFCDFNEGQYIPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTV 183 (632)
Q Consensus 121 ---~---~~~r~~i~~v~Q~-~~~~~~~~~~~~~i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~ 183 (632)
. ..+++.++|++|+ +.++. ..+..+|+.++.. ... .+++.++++.+++.+ .+.+||+|++++
T Consensus 98 ~~~~~~~~~~~~~i~~v~q~~~~~~~-~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qr 176 (520)
T TIGR03269 98 NLSDKLRRRIRKRIAIMLQRTFALYG-DDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQLSHRITHIARDLSGGEKQR 176 (520)
T ss_pred ccCHHHHHHhhhcEEEEeccccccCC-CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCcccCCHHHHHH
Confidence 0 0135679999997 44443 2232335543211 111 345667788887754 457789999988
Q ss_pred cc-----------------cCCCCHHHHHHHHHHHHHHh-C-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 184 VA-----------------TNAVDAQSERIVQAAMVKLV-T-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 184 v~-----------------ts~LD~~~~~~i~~~l~~~~-~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
++ |++||+.+++.+.+.|+++. + ++|+|+|||+++.+.. ||+|++|++|+++..|+++++
T Consensus 177 v~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 256 (520)
T TIGR03269 177 VVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEV 256 (520)
T ss_pred HHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHH
Confidence 83 99999999999999999984 3 7899999999998865 999999999999988887765
Q ss_pred h
Q 047286 244 I 244 (632)
Q Consensus 244 ~ 244 (632)
.
T Consensus 257 ~ 257 (520)
T TIGR03269 257 V 257 (520)
T ss_pred H
Confidence 3
No 54
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.3e-33 Score=321.18 Aligned_cols=250 Identities=25% Similarity=0.370 Sum_probs=210.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++++|+++++.+++.+..++..++.++..++.++.+.|.+.|
T Consensus 302 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (708)
T TIGR01193 302 LLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQ 381 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778888888899999999999999999999999999943
Q ss_pred ------------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 047286 44 ------------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINPY 82 (632)
Q Consensus 44 ------------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~ 82 (632)
.+.+++|++ ...+..+++++++.+|+.++++.+++.+..
T Consensus 382 ~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 461 (708)
T TIGR01193 382 QAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINK 461 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 234555543 334667899999999999999765432100
Q ss_pred ----------------------C------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------C
Q 047286 83 ----------------------D------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------Y 119 (632)
Q Consensus 83 ----------------------~------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~ 119 (632)
+ +.+|++|++|+.++|+||||||||||+++|.|+-. +
T Consensus 462 ~~~~~~~~~~~~I~~~~vsf~y~~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~ 541 (708)
T TIGR01193 462 KKRTELNNLNGDIVINDVSYSYGYGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDI 541 (708)
T ss_pred ccccCCCCCCCcEEEEEEEEEcCCCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHc
Confidence 0 02899999999999999999999999999984321 1
Q ss_pred CcHHhhcceEEEcccCcccccccccccccccC-CCCCCHHHHHHHHHHccchhhHhhCCccccccc--------------
Q 047286 120 APEAEQEKIGLVSKEPIFLFCDFNEGQYIPYG-KQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-------------- 184 (632)
Q Consensus 120 ~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-------------- 184 (632)
++..+|++++||+|+|++|.+|+++ |+.++ .++.+++++.++++.+++++++.++|.|++|.+
T Consensus 542 ~~~~lr~~i~~v~Q~~~lf~gTI~e--Ni~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQR 619 (708)
T TIGR01193 542 DRHTLRQFINYLPQEPYIFSGSILE--NLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQR 619 (708)
T ss_pred CHHHHHHheEEEecCceehhHHHHH--HHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHH
Confidence 2335789999999999999999998 79888 456789999999999999999999999999887
Q ss_pred ------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 185 ------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 185 ------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+||+||+++++.+.+.|+++ +++|+|+|||+++.++.||+|++|++|++++.|+|+|+++.
T Consensus 620 ialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~ 698 (708)
T TIGR01193 620 IALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDR 698 (708)
T ss_pred HHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhc
Confidence 39999999999999999885 67999999999999999999999999999999999999876
Q ss_pred CCcHHHHHH
Q 047286 247 PEGAYSQLV 255 (632)
Q Consensus 247 ~~~~~~~~~ 255 (632)
++.|..++
T Consensus 699 -~~~y~~l~ 706 (708)
T TIGR01193 699 -NGFYASLI 706 (708)
T ss_pred -CCcHHHHh
Confidence 67787765
No 55
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-33 Score=312.88 Aligned_cols=159 Identities=23% Similarity=0.340 Sum_probs=124.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHh-hcceEEEcccCccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAE-QEKIGLVSKEPIFLFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~-r~~i~~v~Q~~~~~~~~~~~~~~i 148 (632)
.+||++++|++++|+||||||||||+++|.|+.... +... +..++|++|++.++. ..+..+|+
T Consensus 29 ~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~-~~tv~e~l 107 (510)
T PRK15439 29 GIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFP-NLSVKENI 107 (510)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEeccCccCC-CCcHHHHh
Confidence 399999999999999999999999999998653211 1111 246999999986544 33333366
Q ss_pred ccCCCC--CCHHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh
Q 047286 149 PYGKQN--ASDEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV 205 (632)
Q Consensus 149 ~~~~~~--~~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~ 205 (632)
.++... ...+++.++++..++. ..+.+||+|+++++ +|++||+.+++.+.+.|+++.
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~ 187 (510)
T PRK15439 108 LFGLPKRQASMQKMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELL 187 (510)
T ss_pred hcccccchHHHHHHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
Confidence 654321 1235667788887764 45678999999888 399999999999999999885
Q ss_pred -CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHh
Q 047286 206 -TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 206 -~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~ 244 (632)
+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 188 ~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (510)
T PRK15439 188 AQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLS 228 (510)
T ss_pred HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcC
Confidence 47899999999998865 9999999999999999888764
No 56
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.2e-33 Score=311.82 Aligned_cols=249 Identities=25% Similarity=0.368 Sum_probs=205.9
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 4 CLPAIVI-AGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 4 ~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
++|++++ +..++.++.++..++.++..+++++.+.|.+.|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (574)
T PRK11160 169 ILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQ 248 (574)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3454443 346677888888999999999999999999954
Q ss_pred ----------------------CCcccHHHH------------------HHHHHHHHHHHHHHHHHHHHhccCCCCC-C-
Q 047286 44 ----------------------LEDMPLGQT------------------SLNVNAFAAGQAAACKMFETIERIPKIN-P- 81 (632)
Q Consensus 44 ----------------------~~~~~~~~~------------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~-~- 81 (632)
.+.+++|.+ ...+..++++++|++|+.++++.+++.+ +
T Consensus 249 ~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~ 328 (574)
T PRK11160 249 ALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFPT 328 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 122333332 2235677899999999999998755421 0
Q ss_pred -------------------C-C------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------CC
Q 047286 82 -------------------Y-D------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------YA 120 (632)
Q Consensus 82 -------------------~-~------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~~ 120 (632)
+ + +++||++++||+++|+||||||||||+++|+|+.. ++
T Consensus 329 ~~~~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~ 408 (574)
T PRK11160 329 TSTAAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYS 408 (574)
T ss_pred ccCCCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCC
Confidence 0 0 01899999999999999999999999999984321 12
Q ss_pred cHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc----------------
Q 047286 121 PEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV---------------- 184 (632)
Q Consensus 121 ~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v---------------- 184 (632)
+..+|++++||+|+|.+|.+++.+ |+.++.++.+++++.++++.+++++++.+ |+|++|.+
T Consensus 409 ~~~~r~~i~~v~Q~~~lf~~ti~~--Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRia 485 (574)
T PRK11160 409 EAALRQAISVVSQRVHLFSATLRD--NLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLG 485 (574)
T ss_pred HHHHHhheeEEcccchhhcccHHH--HhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHH
Confidence 334788999999999999999988 79998877889999999999999999999 99999877
Q ss_pred ----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 185 ----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 185 ----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+|++||+++++.+.+.+.++.+++|+|+|||+++.++.||+|++|++|++++.|+|+|+++. +
T Consensus 486 lARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~ 564 (574)
T PRK11160 486 IARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQ-Q 564 (574)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhc-C
Confidence 29999999999999999998889999999999999999999999999999999999999877 6
Q ss_pred cHHHHHHH
Q 047286 249 GAYSQLVR 256 (632)
Q Consensus 249 ~~~~~~~~ 256 (632)
+.|.++++
T Consensus 565 g~y~~l~~ 572 (574)
T PRK11160 565 GRYYQLKQ 572 (574)
T ss_pred cHHHHHHh
Confidence 78888764
No 57
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-33 Score=308.29 Aligned_cols=158 Identities=16% Similarity=0.275 Sum_probs=122.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--Cc---------------H-HhhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--AP---------------E-AEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--~~---------------~-~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
.+||++++||+++|+||||||||||+++|+|+... .. . ..++.++|++|++.++. .++..+
T Consensus 23 ~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~-~~tv~e 101 (506)
T PRK13549 23 NVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVK-ELSVLE 101 (506)
T ss_pred ceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC-CCcHHH
Confidence 39999999999999999999999999999976432 00 0 12467999999986543 333333
Q ss_pred ccccCCC-----CCC----HHHHHHHHHHccch----hhHhhCCcccccccc-----------------cCCCCHHHHHH
Q 047286 147 YIPYGKQ-----NAS----DEHIRPAVQLANAE----KSIDKLPLGLDTVVA-----------------TNAVDAQSERI 196 (632)
Q Consensus 147 ~i~~~~~-----~~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~ 196 (632)
|+.++.. ..+ .+++.++++..++. ..+.+||+|++++++ |++||+.+++.
T Consensus 102 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~ 181 (506)
T PRK13549 102 NIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAV 181 (506)
T ss_pred HhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHH
Confidence 6655421 011 23566777777764 457889999998883 99999999999
Q ss_pred HHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 197 VQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 197 i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
+.+.|.++. ++.|+|++||+++.+.. ||++++|++|+++..|+.+++
T Consensus 182 l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 230 (506)
T PRK13549 182 LLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGM 230 (506)
T ss_pred HHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccC
Confidence 999999985 47899999999998865 999999999999999876664
No 58
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=7.1e-33 Score=318.69 Aligned_cols=243 Identities=23% Similarity=0.377 Sum_probs=208.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++.+|+++++.+++.+..++..++.++..++.++.+.|.+.|
T Consensus 292 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (694)
T TIGR03375 292 LVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLA 371 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678888888899999999999999999999999999943
Q ss_pred ------------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 047286 44 ------------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINPY 82 (632)
Q Consensus 44 ------------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~ 82 (632)
.+.+++|++ ...+..++.++++.+|+.++++.+++....
T Consensus 372 ~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~ 451 (694)
T TIGR03375 372 TNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEG 451 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 344566653 234677899999999999999875432100
Q ss_pred ------------------------C-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------
Q 047286 83 ------------------------D-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF--------------- 118 (632)
Q Consensus 83 ------------------------~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--------------- 118 (632)
. +.+||+|++||.++|+||||||||||+++|.|+-.
T Consensus 452 ~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~ 531 (694)
T TIGR03375 452 TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQ 531 (694)
T ss_pred CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhh
Confidence 0 02899999999999999999999999999984311
Q ss_pred CCcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc--------------
Q 047286 119 YAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-------------- 184 (632)
Q Consensus 119 ~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-------------- 184 (632)
+++..+|++++||+|++.+|.+|+.+ |+.+++++.+++++.++++.+++++++.++|.|++|.+
T Consensus 532 ~~~~~lr~~i~~v~Q~~~lf~~TI~e--Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQR 609 (694)
T TIGR03375 532 IDPADLRRNIGYVPQDPRLFYGTLRD--NIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQA 609 (694)
T ss_pred CCHHHHHhccEEECCChhhhhhhHHH--HHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHH
Confidence 12335789999999999999999998 79998877899999999999999999999999999887
Q ss_pred ------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 185 ------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 185 ------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+||+||+++++.+.+.|.++.+++|+|+|||+++.++.||+|++|++|++++.|+|+|+++.
T Consensus 610 lalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 610 VALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 39999999999999999999889999999999999999999999999999999999999754
No 59
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=311.06 Aligned_cols=158 Identities=20% Similarity=0.331 Sum_probs=121.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH-hhcceEEEcccCccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA-EQEKIGLVSKEPIFLFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~-~r~~i~~v~Q~~~~~~~~~~~~~~i 148 (632)
.+||++++|++++|+||||||||||+++|+|+...+ +.. .++.++|++|++.++. .++..+|+
T Consensus 22 ~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~-~~tv~e~l 100 (501)
T PRK10762 22 GAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIP-QLTIAENI 100 (501)
T ss_pred eeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEEEEEcchhccC-CCcHHHHh
Confidence 399999999999999999999999999998653211 111 2457999999986543 33334466
Q ss_pred ccCCC------CCC----HHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 149 PYGKQ------NAS----DEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 149 ~~~~~------~~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
.++.. ..+ .+++.++++..++. ..+.+||+|+++++ +|++||+.+++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l 180 (501)
T PRK10762 101 FLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESL 180 (501)
T ss_pred hhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHH
Confidence 55321 111 23466777777764 45788999999888 3999999999999
Q ss_pred HHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 198 QAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 198 ~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
.+.|+++. ++.|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 181 ~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 181 FRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 99999885 46899999999998865 999999999999998876654
No 60
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=9.2e-33 Score=318.77 Aligned_cols=249 Identities=24% Similarity=0.311 Sum_probs=208.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++.+|+++++..++.+...+..++.++..++.++.+.|.+.|
T Consensus 300 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (710)
T TIGR03796 300 IAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQIL 379 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667777778888888899999999999999999999843
Q ss_pred ------------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCC-
Q 047286 44 ------------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINP- 81 (632)
Q Consensus 44 ------------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~- 81 (632)
.+.+++|++ ...+..++.++.+.+|+.++++.+++...
T Consensus 380 ~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~ 459 (710)
T TIGR03796 380 GVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLE 459 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 244555553 23467789999999999999976433210
Q ss_pred ------------C---------------C-------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------
Q 047286 82 ------------Y---------------D-------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF--------- 118 (632)
Q Consensus 82 ------------~---------------~-------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--------- 118 (632)
. + +++||+|++||.++|+||||||||||+++|.|+-.
T Consensus 460 ~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 539 (710)
T TIGR03796 460 EEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFD 539 (710)
T ss_pred cccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 0 0 01899999999999999999999999999985421
Q ss_pred ------CCcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc--------
Q 047286 119 ------YAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-------- 184 (632)
Q Consensus 119 ------~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-------- 184 (632)
+++..+|++++||+|+|++|.+|+++ |+.++.++.+++++.++++.+++++++.++|.|++|.+
T Consensus 540 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~e--Ni~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LS 617 (710)
T TIGR03796 540 GIPREEIPREVLANSVAMVDQDIFLFEGTVRD--NLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLS 617 (710)
T ss_pred CEeHHHCCHHHHHhheeEEecCChhhhccHHH--HhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCC
Confidence 12334789999999999999999988 78888777889999999999999999999999999887
Q ss_pred ------------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecCh
Q 047286 185 ------------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTH 240 (632)
Q Consensus 185 ------------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~ 240 (632)
+||+||+++++.+.+.+++ .++|+|+|||+++.++.||+|++|++|+++++|+|
T Consensus 618 GGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~ 695 (710)
T TIGR03796 618 GGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTH 695 (710)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCH
Confidence 3999999999999999987 58999999999999999999999999999999999
Q ss_pred hHHhcCCCcHHHHHH
Q 047286 241 DELIEDPEGAYSQLV 255 (632)
Q Consensus 241 ~el~~~~~~~~~~~~ 255 (632)
+|+++. ++.|.+++
T Consensus 696 ~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 696 EELWAV-GGAYARLI 709 (710)
T ss_pred HHHHHc-CCcHHHHh
Confidence 999876 66777664
No 61
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-32 Score=311.50 Aligned_cols=252 Identities=26% Similarity=0.404 Sum_probs=207.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|+++++..++.++.++..++.++..++.++.+.|.+.|
T Consensus 173 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (592)
T PRK10790 173 MIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLL 252 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666677777888888888889999999999954
Q ss_pred -----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCC--
Q 047286 44 -----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINP-- 81 (632)
Q Consensus 44 -----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~-- 81 (632)
.+.+++|.+ ...+..+++++.+++|+.++++.+++...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 332 (592)
T PRK10790 253 RPLLSLFSALILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND 332 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC
Confidence 122333332 23456788999999999999975432110
Q ss_pred -----------------C--C----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------CCcHH
Q 047286 82 -----------------Y--D----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------YAPEA 123 (632)
Q Consensus 82 -----------------~--~----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~~~~~ 123 (632)
+ + +++||++++||.++|+|+||||||||+++|.|+-. +++..
T Consensus 333 ~~~~~~~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~ 412 (592)
T PRK10790 333 DRPLQSGRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSV 412 (592)
T ss_pred ccCCCCCeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHH
Confidence 0 0 12899999999999999999999999999984321 12335
Q ss_pred hhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-------------------
Q 047286 124 EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV------------------- 184 (632)
Q Consensus 124 ~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v------------------- 184 (632)
+|++++||||+|.+|.+|+++ |+.++. +.+++++.++++.+++++++.++|+|++|.+
T Consensus 413 l~~~i~~v~Q~~~lF~~Ti~~--NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialAR 489 (592)
T PRK10790 413 LRQGVAMVQQDPVVLADTFLA--NVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALAR 489 (592)
T ss_pred HHhheEEEccCCccccchHHH--HHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHH
Confidence 789999999999999999998 788886 6789999999999999999999999999877
Q ss_pred -------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 185 -------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 185 -------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+||+||+++++.+.+.|+++.+++|+|+|||+++.++.||+|++|++|++++.|+|+|+++. ++.|
T Consensus 490 aLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y 568 (592)
T PRK10790 490 VLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRY 568 (592)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHH
Confidence 39999999999999999998888999999999999999999999999999999999999877 6889
Q ss_pred HHHHHHH
Q 047286 252 SQLVRLQ 258 (632)
Q Consensus 252 ~~~~~~~ 258 (632)
+++++.+
T Consensus 569 ~~l~~~~ 575 (592)
T PRK10790 569 WQMYQLQ 575 (592)
T ss_pred HHHHHHH
Confidence 8888655
No 62
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3.8e-33 Score=288.01 Aligned_cols=196 Identities=26% Similarity=0.280 Sum_probs=151.5
Q ss_pred HHHHHhhhhHHhhcCCcCHHHHHHHHH--HHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCC----CCCCCC--
Q 047286 422 NAFCFFIGSKLVEHGDATFGEVFKFLS--EFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDW----SSKDGM-- 493 (632)
Q Consensus 422 ~~~~~~~g~~~v~~g~~s~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~----~~~~~~-- 493 (632)
...++..|++++..|++|.|.+++.-. .....++-.....+..+..+..+..|+.+++...|+... |.+.+.
T Consensus 257 Qs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m~LP~P~g~L~ 336 (580)
T COG4618 257 QSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAERMPLPAPQGALS 336 (580)
T ss_pred HHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCCCCCceee
Confidence 345677899999999999999987653 222334555666777888899999999999977654321 111100
Q ss_pred ------CCC-----ccc---ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh--------------------------
Q 047286 494 ------TPS-----TVR---GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ-------------------------- 533 (632)
Q Consensus 494 ------~~~-----~~~---g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~-------------------------- 533 (632)
.|| .++ -.+..++.+|||||||||||||+++|.|.+.|..
T Consensus 337 Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLP 416 (580)
T COG4618 337 VERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLP 416 (580)
T ss_pred EeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCc
Confidence 011 111 1344456899999999999999999999877632
Q ss_pred -------------------------hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------
Q 047286 534 -------------------------VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------- 581 (632)
Q Consensus 534 -------------------------~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------- 581 (632)
+..+....+.||.|.+||+||||.|||+|..|||||||||++|||+..
T Consensus 417 QdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVL 496 (580)
T COG4618 417 QDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVL 496 (580)
T ss_pred ccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEe
Confidence 111122337899999999999999999999999999999999999533
Q ss_pred -----------------------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -----------------------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -----------------------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
++||||++.+..+|+|+||++|++...|+-+|.+++
T Consensus 497 DEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 497 DEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 899999999999999999999999999999998875
No 63
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.9e-32 Score=305.22 Aligned_cols=254 Identities=24% Similarity=0.364 Sum_probs=211.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|+++++...+.+++.+..++.++..+++++.+.|.+.|
T Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (569)
T PRK10789 145 LPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFD 224 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777888888999999999999999999999943
Q ss_pred -----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCC--
Q 047286 44 -----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINP-- 81 (632)
Q Consensus 44 -----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~-- 81 (632)
.+.+++|++ ...+..++++++|++|+.++++.+++...
T Consensus 225 ~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~ 304 (569)
T PRK10789 225 PTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS 304 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC
Confidence 234455543 23456789999999999999976443110
Q ss_pred --------------------CC-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------Cc
Q 047286 82 --------------------YD-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------AP 121 (632)
Q Consensus 82 --------------------~~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~ 121 (632)
.. +.+|+++++|++++|+||||||||||+++|.|+... ++
T Consensus 305 ~~~~~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~ 384 (569)
T PRK10789 305 EPVPEGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQL 384 (569)
T ss_pred CCCCCCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCH
Confidence 00 128999999999999999999999999999854211 12
Q ss_pred HHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------
Q 047286 122 EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV----------------- 184 (632)
Q Consensus 122 ~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v----------------- 184 (632)
..+|++++|++|+|.+|.+++++ |+.++.++.+++++.++++.+++++++.++|.|++|.+
T Consensus 385 ~~~~~~i~~v~q~~~lf~~ti~~--Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~l 462 (569)
T PRK10789 385 DSWRSRLAVVSQTPFLFSDTVAN--NIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISI 462 (569)
T ss_pred HHHHhheEEEccCCeeccccHHH--HHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHH
Confidence 34678899999999999999987 78888777889999999999999999999999998876
Q ss_pred ---------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 185 ---------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 185 ---------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
+|++||+++++.+.+.|+++.+++|+|++||+++.++.||+|++|++|+++++|+++++.+. ++
T Consensus 463 ARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~ 541 (569)
T PRK10789 463 ARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SG 541 (569)
T ss_pred HHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CC
Confidence 28999999999999999998889999999999999999999999999999999999999876 67
Q ss_pred HHHHHHHHHh
Q 047286 250 AYSQLVRLQE 259 (632)
Q Consensus 250 ~~~~~~~~~~ 259 (632)
.|.++++.+.
T Consensus 542 ~y~~l~~~~~ 551 (569)
T PRK10789 542 WYRDMYRYQQ 551 (569)
T ss_pred hHHHHHHHhh
Confidence 8888886653
No 64
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-33 Score=307.32 Aligned_cols=159 Identities=17% Similarity=0.249 Sum_probs=122.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH-hhcceEEEcccCccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA-EQEKIGLVSKEPIFLFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~-~r~~i~~v~Q~~~~~~~~~~~~~~i 148 (632)
.+||++++||+++|+||||||||||+++|.|+.... +.. .++.++|++|++.++. ..+..+|+
T Consensus 23 ~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~-~~tv~e~l 101 (510)
T PRK09700 23 SVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIGIIYQELSVID-ELTVLENL 101 (510)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeEEEeecccccC-CCcHHHHh
Confidence 499999999999999999999999999998653211 111 2356999999986544 23333355
Q ss_pred ccCCC------C---CC----HHHHHHHHHHccch----hhHhhCCcccccccc-----------------cCCCCHHHH
Q 047286 149 PYGKQ------N---AS----DEHIRPAVQLANAE----KSIDKLPLGLDTVVA-----------------TNAVDAQSE 194 (632)
Q Consensus 149 ~~~~~------~---~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v~-----------------ts~LD~~~~ 194 (632)
.++.. . .+ .+++.++++.+++. ..+.+||+|++++++ |++||+.++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~ 181 (510)
T PRK09700 102 YIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEV 181 (510)
T ss_pred hhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHH
Confidence 44321 0 01 23456677777764 457889999998883 999999999
Q ss_pred HHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHh
Q 047286 195 RIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 195 ~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~ 244 (632)
+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++..|+++++.
T Consensus 182 ~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 233 (510)
T PRK09700 182 DYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVS 233 (510)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCC
Confidence 99999999985 47899999999998865 9999999999999999887653
No 65
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3e-31 Score=296.98 Aligned_cols=254 Identities=17% Similarity=0.075 Sum_probs=172.4
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-hH-------------
Q 047286 349 GAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLK-KK------------- 413 (632)
Q Consensus 349 G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~-~~------------- 413 (632)
|++++|+++|++.+++.+.. +..++..++.+++++++++.. |.+++++++.+|+.+...++. ++
T Consensus 110 G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (555)
T TIGR01194 110 HNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEED 188 (555)
T ss_pred chhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999998864 666677777777777777766 999988777666654332211 00
Q ss_pred ----------------HH--H----------HHH--------------H------HHHH-HHhhhhHHh---hcCCcCHH
Q 047286 414 ----------------KN--Y----------ERL--------------H------INAF-CFFIGSKLV---EHGDATFG 441 (632)
Q Consensus 414 ----------------~~--~----------~~~--------------~------~~~~-~~~~g~~~v---~~g~~s~~ 441 (632)
+. . .+. . ...+ .+.++..++ ..|.+++|
T Consensus 189 ~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~g 268 (555)
T TIGR01194 189 AFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCALFAAAMFASIDAA 268 (555)
T ss_pred HHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 00 0 000 0 0000 011111111 12688999
Q ss_pred HHHHHHHH--HHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcc---CCCCC-CCCCC------------CCC---------
Q 047286 442 EVFKFLSE--FGCFWCLESTAVAPNADKAKGSAASIFEILES---KPKID-WSSKD------------GMT--------- 494 (632)
Q Consensus 442 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~---~~~~~-~~~~~------------~~~--------- 494 (632)
++++++.. ....++..+......++++..+.+|+.++++. +++.. .+..+ ...
T Consensus 269 ~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~ 348 (555)
T TIGR01194 269 AISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPK 348 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeC
Confidence 98888743 33345777788888999999999999999753 11110 00000 000
Q ss_pred ---------CCcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcH-----------------
Q 047286 495 ---------PSTVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIY----------------- 536 (632)
Q Consensus 495 ---------~~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~----------------- 536 (632)
..+++-+|+-++++|||||||||||||+++|.|+|+|++ +..
T Consensus 349 ~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf 428 (555)
T TIGR01194 349 APEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLF 428 (555)
T ss_pred CCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhh
Confidence 000111233344899999999999999999999999843 000
Q ss_pred -------------------HHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------
Q 047286 537 -------------------SWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------- 581 (632)
Q Consensus 537 -------------------~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------- 581 (632)
.....++++++..+|+||||. .+||||||||||||||+++
T Consensus 429 ~~ti~~n~~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~ 503 (555)
T TIGR01194 429 DDLIGPDEGEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDP 503 (555)
T ss_pred hhhhhcccccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCH
Confidence 001125678999999999994 7899999999999999655
Q ss_pred ---------------------hccccchhhhhcCCEEEEEeCCeEeee
Q 047286 582 ---------------------CGCGSPPYHYKNADITSVVKNGVIAEK 608 (632)
Q Consensus 582 ---------------------~~iahrl~~~~~aD~I~vl~~G~ive~ 608 (632)
+++|||+++++.||+|+||++|+|+|.
T Consensus 504 ~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 504 AFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 788999999999999999999999984
No 66
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=302.40 Aligned_cols=153 Identities=17% Similarity=0.255 Sum_probs=118.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c-HHhhcceEEEcccCccccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P-EAEQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~-~~~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
.+||++++|++++|+||||||||||+++|.|+.... + ..+++.++|++|++.++.. ++.+ |
T Consensus 22 ~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~--~ 99 (501)
T PRK11288 22 DISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPEMTVAE--N 99 (501)
T ss_pred eeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEEEEEechhccCCCCHHH--H
Confidence 399999999999999999999999999998653211 1 1235679999999865542 4444 5
Q ss_pred cccCCC----C-CC----HHHHHHHHHHccch----hhHhhCCcccccccc-----------------cCCCCHHHHHHH
Q 047286 148 IPYGKQ----N-AS----DEHIRPAVQLANAE----KSIDKLPLGLDTVVA-----------------TNAVDAQSERIV 197 (632)
Q Consensus 148 i~~~~~----~-~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i 197 (632)
+.++.. . .. .+++.++++.+++. ..+.+||+|++++++ |++||+.+++.+
T Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l 179 (501)
T PRK11288 100 LYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQL 179 (501)
T ss_pred HHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHH
Confidence 554321 1 11 24566778877764 457889999998883 999999999999
Q ss_pred HHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecC
Q 047286 198 QAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGT 239 (632)
Q Consensus 198 ~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~ 239 (632)
.+.|+++. +++|+|++||+++.+.. ||+|++|++|+++..++
T Consensus 180 ~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~ 223 (501)
T PRK11288 180 FRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFD 223 (501)
T ss_pred HHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 99999885 47899999999998865 99999999999986553
No 67
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.3e-32 Score=310.63 Aligned_cols=252 Identities=27% Similarity=0.362 Sum_probs=213.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|+++++..++.+..++..++.+++.++.++.+.|.+.|
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (694)
T TIGR01846 286 GSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAG 365 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567777777788888999999999999999999999943
Q ss_pred -----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCCC-
Q 047286 44 -----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINPY- 82 (632)
Q Consensus 44 -----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~- 82 (632)
.+.+++|++ ...+..+++++.+++|+.++++.+++.+..
T Consensus 366 ~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~ 445 (694)
T TIGR01846 366 QAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAG 445 (694)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCC
Confidence 244566653 234677899999999999999765432110
Q ss_pred ----------------------C-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------CC
Q 047286 83 ----------------------D-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------YA 120 (632)
Q Consensus 83 ----------------------~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~~ 120 (632)
+ +.+||++++|+.++|+|+||||||||+++|.|+.. ++
T Consensus 446 ~~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~ 525 (694)
T TIGR01846 446 LAALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIAD 525 (694)
T ss_pred CCCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCC
Confidence 0 01899999999999999999999999999985421 12
Q ss_pred cHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc----------------
Q 047286 121 PEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV---------------- 184 (632)
Q Consensus 121 ~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v---------------- 184 (632)
...+|++++||+|++.+|.+++.+ |+.++.++.+++++.++++.+++++++.++|.|++|.+
T Consensus 526 ~~~~r~~i~~v~q~~~lf~~ti~e--Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~ 603 (694)
T TIGR01846 526 PAWLRRQMGVVLQENVLFSRSIRD--NIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIA 603 (694)
T ss_pred HHHHHHhCeEEccCCeehhhhHHH--HHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHH
Confidence 335788999999999999999988 78888777889999999999999999999999999887
Q ss_pred ----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 185 ----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 185 ----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+|++||+.+++.+.+.|+++.+++|+|++||+++.++.||+|++|++|++++.|+|+++++. +
T Consensus 604 lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~-~ 682 (694)
T TIGR01846 604 IARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL-Q 682 (694)
T ss_pred HHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc-C
Confidence 39999999999999999998888999999999999999999999999999999999999876 6
Q ss_pred cHHHHHHHH
Q 047286 249 GAYSQLVRL 257 (632)
Q Consensus 249 ~~~~~~~~~ 257 (632)
+.|.++++.
T Consensus 683 ~~y~~l~~~ 691 (694)
T TIGR01846 683 GLYARLWQQ 691 (694)
T ss_pred ChHHHHHHh
Confidence 788888764
No 68
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-32 Score=300.44 Aligned_cols=157 Identities=16% Similarity=0.216 Sum_probs=121.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c-HHhhcceEEEcccCcccc-cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P-EAEQEKIGLVSKEPIFLF-CDFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~-~~~r~~i~~v~Q~~~~~~-~~~~~~~~ 147 (632)
.+||++++||+++|+||||||||||+++|.|+.... + ...++.++|++|++.++. .++.+ |
T Consensus 16 ~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~--~ 93 (491)
T PRK10982 16 NVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQRSVMD--N 93 (491)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCCCHHH--H
Confidence 399999999999999999999999999998653211 0 113567999999986543 24443 5
Q ss_pred cccCCC---C--CC----HHHHHHHHHHccc----hhhHhhCCcccccccc-----------------cCCCCHHHHHHH
Q 047286 148 IPYGKQ---N--AS----DEHIRPAVQLANA----EKSIDKLPLGLDTVVA-----------------TNAVDAQSERIV 197 (632)
Q Consensus 148 i~~~~~---~--~~----~~~~~~~~~~~~l----~~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i 197 (632)
+.++.. . .+ .+++.++++..++ +..+.+||+|++++++ |++||+.+++.+
T Consensus 94 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l 173 (491)
T PRK10982 94 MWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHL 173 (491)
T ss_pred hhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHH
Confidence 554321 1 11 2345667777765 3457889999998883 999999999999
Q ss_pred HHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 198 QAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 198 ~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
.+.|+++. ++.|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 174 ~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 221 (491)
T PRK10982 174 FTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGL 221 (491)
T ss_pred HHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhC
Confidence 99999985 47899999999998865 999999999999999887664
No 69
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1e-31 Score=303.68 Aligned_cols=253 Identities=27% Similarity=0.392 Sum_probs=209.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|+++++..++.++.++..++.++..++.++.+.|.+.|
T Consensus 164 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (588)
T PRK13657 164 VLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALAS 243 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667777788888888888899999999999999954
Q ss_pred -----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCC---
Q 047286 44 -----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKIN--- 80 (632)
Q Consensus 44 -----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~--- 80 (632)
.|.+++|.+ ...+..+..++.+++|+.++++.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~ 323 (588)
T PRK13657 244 VLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPP 323 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 244455543 2345678889999999999987633210
Q ss_pred C----C----------------C-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------C
Q 047286 81 P----Y----------------D-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------A 120 (632)
Q Consensus 81 ~----~----------------~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~ 120 (632)
. . + +++|+++++||+++|+|+||||||||+++|.|+-.+ +
T Consensus 324 ~~~~~~~~~~~I~~~~vsf~y~~~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~ 403 (588)
T PRK13657 324 GAIDLGRVKGAVEFDDVSFSYDNSRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVT 403 (588)
T ss_pred CCCCcCCCCCeEEEEEEEEEeCCCCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCC
Confidence 0 0 0 018999999999999999999999999999844211 1
Q ss_pred cHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc----------------
Q 047286 121 PEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV---------------- 184 (632)
Q Consensus 121 ~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v---------------- 184 (632)
...+|++++||||+|.+|.+|+++ |+.++.++.+++++.++++.+++++++.++|.|++|.+
T Consensus 404 ~~~~r~~i~~v~Q~~~lf~~Ti~~--Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRia 481 (588)
T PRK13657 404 RASLRRNIAVVFQDAGLFNRSIED--NIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLA 481 (588)
T ss_pred HHHHHhheEEEecCcccccccHHH--HHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHH
Confidence 234688999999999999999988 79988777889999999999999999999999999876
Q ss_pred ----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 185 ----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 185 ----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+||+||+.+++.+.+.|++..+++|+|+|||+++.++.||+|++|++|++++.|+|++++.. +
T Consensus 482 lARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~ 560 (588)
T PRK13657 482 IARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-G 560 (588)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-C
Confidence 39999999999999999998788999999999999999999999999999999999999876 6
Q ss_pred cHHHHHHHHH
Q 047286 249 GAYSQLVRLQ 258 (632)
Q Consensus 249 ~~~~~~~~~~ 258 (632)
+.|.+++..+
T Consensus 561 ~~y~~l~~~~ 570 (588)
T PRK13657 561 GRFAALLRAQ 570 (588)
T ss_pred ChHHHHHHHh
Confidence 7788877654
No 70
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-31 Score=300.46 Aligned_cols=156 Identities=21% Similarity=0.272 Sum_probs=118.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEEcccCccccc-ccccccccccCCC------
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLVSKEPIFLFC-DFNEGQYIPYGKQ------ 153 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v~Q~~~~~~~-~~~~~~~i~~~~~------ 153 (632)
.+||+|++|++++|+||||||||||+++|.|........ .+..+|||+|++.++.. ++.+ |+.++..
T Consensus 25 ~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~~~tv~e--~l~~~~~~~~~~~ 102 (556)
T PRK11819 25 DISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLDPEKTVRE--NVEEGVAEVKAAL 102 (556)
T ss_pred CceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCCCcHHH--HHHHhhHHHHHHH
Confidence 499999999999999999999999999999653322111 13569999999876542 3333 4443210
Q ss_pred ----------C-C-------------------------CHHHHHHHHHHccc---hhhHhhCCccccccc----------
Q 047286 154 ----------N-A-------------------------SDEHIRPAVQLANA---EKSIDKLPLGLDTVV---------- 184 (632)
Q Consensus 154 ----------~-~-------------------------~~~~~~~~~~~~~l---~~~i~~l~~g~~~~v---------- 184 (632)
. . ..+++.++++.+++ +..+.+||+|+++++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~LSgGqkqrv~la~al~~~p 182 (556)
T PRK11819 103 DRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPPWDAKVTKLSGGERRRVALCRLLLEKP 182 (556)
T ss_pred HHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCcccCchhhcCHHHHHHHHHHHHHhCCC
Confidence 0 0 02344556666655 456788999999888
Q ss_pred -------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEE-EecChhHHh
Q 047286 185 -------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIV-EKGTHDELI 244 (632)
Q Consensus 185 -------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~-~~g~~~el~ 244 (632)
+|++||+.+.+.+.+.|+++. .|+|++||+++.+.. ||+|++|++|+++ ..|+++++.
T Consensus 183 ~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~ 249 (556)
T PRK11819 183 DMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVAGWILELDRGRGIPWEGNYSSWL 249 (556)
T ss_pred CEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhcCeEEEEeCCEEEEecCCHHHHH
Confidence 399999999999999999873 599999999998875 9999999999986 678777664
No 71
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.5e-31 Score=301.90 Aligned_cols=252 Identities=33% Similarity=0.495 Sum_probs=212.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++++|+++++..++.++.++..++.++..++.++.+.|.+.|
T Consensus 161 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (571)
T TIGR02203 161 VVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSIS 240 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355677778888899999999999999999999999999954
Q ss_pred ------------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCC-
Q 047286 44 ------------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINP- 81 (632)
Q Consensus 44 ------------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~- 81 (632)
.+.+++|.+ ...+..+++++++.+|+.++++.+++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 320 (571)
T TIGR02203 241 SPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG 320 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 233444442 34567889999999999999976443110
Q ss_pred ---------------------C-C----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------C
Q 047286 82 ---------------------Y-D----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------A 120 (632)
Q Consensus 82 ---------------------~-~----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~ 120 (632)
. . +.+||++++||+++|+|+||||||||+++|.|+-.+ +
T Consensus 321 ~~~~~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~ 400 (571)
T TIGR02203 321 TRAIERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYT 400 (571)
T ss_pred CCCCCCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcC
Confidence 0 0 128999999999999999999999999999854211 2
Q ss_pred cHHhhcceEEEcccCcccccccccccccccCCC-CCCHHHHHHHHHHccchhhHhhCCccccccc---------------
Q 047286 121 PEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQ-NASDEHIRPAVQLANAEKSIDKLPLGLDTVV--------------- 184 (632)
Q Consensus 121 ~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v--------------- 184 (632)
...++++++|+||+|++|.+++++ |+.++.+ +.+++++.++++.+++++++.++|.|++|.+
T Consensus 401 ~~~~~~~i~~v~Q~~~lf~~Ti~~--Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRi 478 (571)
T TIGR02203 401 LASLRRQVALVSQDVVLFNDTIAN--NIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRL 478 (571)
T ss_pred HHHHHhhceEEccCcccccccHHH--HHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHH
Confidence 234688899999999999999998 7888875 6889999999999999999999999999887
Q ss_pred -----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCC
Q 047286 185 -----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 185 -----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
+||+||+++++.+.+.|++..+++|+|+|||++..+..||+|++|++|++++.|+++++.+.
T Consensus 479 aLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~- 557 (571)
T TIGR02203 479 AIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR- 557 (571)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-
Confidence 39999999999999999998889999999999999999999999999999999999999876
Q ss_pred CcHHHHHHH
Q 047286 248 EGAYSQLVR 256 (632)
Q Consensus 248 ~~~~~~~~~ 256 (632)
++.|.+++.
T Consensus 558 ~~~~~~~~~ 566 (571)
T TIGR02203 558 NGLYAQLHN 566 (571)
T ss_pred CCHHHHHHH
Confidence 567777654
No 72
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.1e-30 Score=316.33 Aligned_cols=159 Identities=15% Similarity=0.182 Sum_probs=119.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC--CC------------c----HHhhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF--YA------------P----EAEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--~~------------~----~~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
++|+++++||+++|+||||||||||+|+|.|... .. . ...|+.++|++|++.++. .++..+
T Consensus 79 ~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~-~lTV~E 157 (1394)
T TIGR00956 79 PMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP-HLTVGE 157 (1394)
T ss_pred CCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC-CCCHHH
Confidence 4999999999999999999999999999987531 01 0 113456999999976543 334333
Q ss_pred ccccCCC---------CCCHH----H-HHHHHHHccchhh---------HhhCCcccccccc-----------------c
Q 047286 147 YIPYGKQ---------NASDE----H-IRPAVQLANAEKS---------IDKLPLGLDTVVA-----------------T 186 (632)
Q Consensus 147 ~i~~~~~---------~~~~~----~-~~~~~~~~~l~~~---------i~~l~~g~~~~v~-----------------t 186 (632)
++.+... ..+.+ + .+++++..++.+. +..+++|+++++. |
T Consensus 158 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPT 237 (1394)
T TIGR00956 158 TLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNAT 237 (1394)
T ss_pred HHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCC
Confidence 5554210 11222 2 2346677777542 4569999999883 9
Q ss_pred CCCCHHHHHHHHHHHHHHhC--CceEEEEecCc-hHH-hhcCeEEEEeCCeEEEecChhHHh
Q 047286 187 NAVDAQSERIVQAAMVKLVT--NQTVVIVANCL-ITI-RNADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 187 s~LD~~~~~~i~~~l~~~~~--~~tviiitH~~-~~~-~~aD~i~vl~~G~i~~~g~~~el~ 244 (632)
+|||+.++..+.+.|+++.+ ++|+|+++|++ +.+ +.+|+|++|++|+++..|+.+++.
T Consensus 238 sgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~ 299 (1394)
T TIGR00956 238 RGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAK 299 (1394)
T ss_pred CCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHH
Confidence 99999999999999999853 78999999997 444 459999999999999999998873
No 73
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.8e-32 Score=282.11 Aligned_cols=170 Identities=33% Similarity=0.534 Sum_probs=156.3
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC--------------CCCcHHhhcceEEEcccCcccccccccccccccC
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFR--------------FYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYG 151 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~--------------~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~ 151 (632)
+||+|++||.+||+|+|||||||++|+|..+- .+.++.+|+.||||||+..+|+.|+.. ||.+|
T Consensus 371 vsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~--NI~YG 448 (591)
T KOG0057|consen 371 VSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFDYSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILY--NIKYG 448 (591)
T ss_pred eeEEecCCCEEEEECCCCCCHHHHHHHHHHHhccCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHH--HhhcC
Confidence 99999999999999999999999999997321 123456899999999999999999988 89999
Q ss_pred CCCCCHHHHHHHHHHccchhhHhhCCccccccc--------------------------------ccCCCCHHHHHHHHH
Q 047286 152 KQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV--------------------------------ATNAVDAQSERIVQA 199 (632)
Q Consensus 152 ~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v--------------------------------~ts~LD~~~~~~i~~ 199 (632)
+...+++++.++++.+++++.+.++|+|++|.+ +||+||.++|+.+.+
T Consensus 449 n~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~ 528 (591)
T KOG0057|consen 449 NPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILD 528 (591)
T ss_pred CCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHH
Confidence 999999999999999999999999999999888 399999999999999
Q ss_pred HHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHHHH
Q 047286 200 AMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVRLQ 258 (632)
Q Consensus 200 ~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~ 258 (632)
.+.+...++|+|+|.|++..++.||+|+++++|++.+.|+|+|++. +.+.|.++|..+
T Consensus 529 ~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 529 MIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQ 586 (591)
T ss_pred HHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccc
Confidence 9999878999999999999999999999999999999999999998 578888888654
No 74
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.8e-31 Score=295.85 Aligned_cols=157 Identities=16% Similarity=0.262 Sum_probs=119.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--Cc---------------H-HhhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--AP---------------E-AEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--~~---------------~-~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
.+||++++|++++|+||||||||||+++|.|+... .. . ..++.++|++|++.++. .++..+
T Consensus 19 ~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~-~~tv~~ 97 (500)
T TIGR02633 19 GIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP-ELSVAE 97 (500)
T ss_pred ceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC-CCcHHH
Confidence 39999999999999999999999999999876432 00 0 12456999999986543 233333
Q ss_pred ccccCCC------CCC----HHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCHHHH
Q 047286 147 YIPYGKQ------NAS----DEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDAQSE 194 (632)
Q Consensus 147 ~i~~~~~------~~~----~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~~~~ 194 (632)
|+.++.. ... .+++.++++..++. ..+.+||+|+++++ +|++||+.++
T Consensus 98 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~ 177 (500)
T TIGR02633 98 NIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKET 177 (500)
T ss_pred HHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Confidence 5544321 011 23466777777764 23778999999888 3999999999
Q ss_pred HHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhH
Q 047286 195 RIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDE 242 (632)
Q Consensus 195 ~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~e 242 (632)
+.+.+.|+++. ++.|+|++||+++.+.. ||+|++|++|+++..|+.++
T Consensus 178 ~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (500)
T TIGR02633 178 EILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMST 227 (500)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCccc
Confidence 99999999885 46899999999998865 99999999999998776543
No 75
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=99.98 E-value=1.1e-31 Score=279.80 Aligned_cols=197 Identities=28% Similarity=0.461 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCC-C--------------------------CcEEEEeeCCCEEEEEcCCCchHHHH
Q 047286 57 NAFAAGQAAACKMFETIERIPKINPY-D--------------------------NRFLQHVPSGTTVALVGQSGSGKSTV 109 (632)
Q Consensus 57 ~~~~~~~~a~~ri~~~~~~~~~~~~~-~--------------------------~~~~~~i~~Ge~~~ivG~sGsGKSTL 109 (632)
....+...|+.|+.++++.+++.... . +.+||++++||.+||+|+||||||||
T Consensus 301 ~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTl 380 (573)
T COG4987 301 QHLGQVIASARRLNDILDQKPEVTFPDEQTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTL 380 (573)
T ss_pred HHhhHHHHHHHHHhhhccCCcccCCCccccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHH
Confidence 45667889999999999988764321 0 01999999999999999999999999
Q ss_pred HHHHHhC---------------CCCCcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHh
Q 047286 110 INLVESF---------------RFYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSID 174 (632)
Q Consensus 110 l~ll~~~---------------~~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~ 174 (632)
++++.+. ..+++..+|+.+++++|.+.+|.+|+++ |+..+++++++|++.++++.+++++.+.
T Consensus 381 lqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~--NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 381 LQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRD--NLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHH--HHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 9999842 1223344788999999999999999998 7999999999999999999999999999
Q ss_pred hCCccccccc--------------------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh
Q 047286 175 KLPLGLDTVV--------------------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN 222 (632)
Q Consensus 175 ~l~~g~~~~v--------------------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~ 222 (632)
+.|.|++|.+ +|.|||+.|++++++.+.+..++||+++|||++..++.
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 9999998877 28999999999999999999999999999999999999
Q ss_pred cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHH
Q 047286 223 ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVR 256 (632)
Q Consensus 223 aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~ 256 (632)
||+|++|++|+++++|+|.+++.+ ++.|.++++
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 999999999999999999999985 677877754
No 76
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=99.98 E-value=8.6e-32 Score=297.64 Aligned_cols=159 Identities=16% Similarity=0.120 Sum_probs=120.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCccc--cc-----cc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPIFL--FC-----DF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~~~--~~-----~~ 142 (632)
.+||++++|++++|+||||||||||+++|.|+...+ +...++.++|++|++... .. ..
T Consensus 21 ~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 100 (490)
T PRK10938 21 LPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSPGEDDTGR 100 (490)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhceeccCcchhhcccchhhccc
Confidence 399999999999999999999999999998652110 112345699999986431 11 11
Q ss_pred ccccccccCCCCCCHHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHH
Q 047286 143 NEGQYIPYGKQNASDEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAM 201 (632)
Q Consensus 143 ~~~~~i~~~~~~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l 201 (632)
...+++.++. ...+++.++++..++.+ .+.+||+|++++++ |++||+.+++.+.+.|
T Consensus 101 ~~~~~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l 178 (490)
T PRK10938 101 TTAEIIQDEV--KDPARCEQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELL 178 (490)
T ss_pred cHHHhcccch--hHHHHHHHHHHHcCCHhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHH
Confidence 1112332221 12456777888887753 46789999998883 9999999999999999
Q ss_pred HHHhC-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 202 VKLVT-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 202 ~~~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+++.+ +.|+|++||+++.+.. ||++++|++|+++..|+++++..
T Consensus 179 ~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 224 (490)
T PRK10938 179 ASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ 224 (490)
T ss_pred HHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99854 6899999999998865 99999999999999998887753
No 77
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=9.7e-31 Score=296.01 Aligned_cols=157 Identities=16% Similarity=0.168 Sum_probs=112.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh----hcceEEEcccCccccccccc--------------c-
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE----QEKIGLVSKEPIFLFCDFNE--------------G- 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~----r~~i~~v~Q~~~~~~~~~~~--------------~- 145 (632)
.+||+|++|++++|+||||||||||+++|+|....+...+ ...++|++|++..+..+... .
T Consensus 19 ~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~~~~~~~~~v~~~~~~~~~l~~~~ 98 (638)
T PRK10636 19 NATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPALPQPALEYVIDGDREYRQLEAQL 98 (638)
T ss_pred CcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCCCHHHHHHHhhHHHHHHHHHH
Confidence 3999999999999999999999999999996533222211 12478999864322111100 0
Q ss_pred -----ccc--ccC-------C--CCCCHHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccC
Q 047286 146 -----QYI--PYG-------K--QNASDEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATN 187 (632)
Q Consensus 146 -----~~i--~~~-------~--~~~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts 187 (632)
.+. .+. . ......++.++++..++. ..+..||+|+++++ +|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn 178 (638)
T PRK10636 99 HDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTN 178 (638)
T ss_pred HHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCchhhcCHHHHHHHHHHHHHccCCCEEEEcCCCC
Confidence 000 000 0 001234567778877763 35788999999888 399
Q ss_pred CCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEE-ecChhHH
Q 047286 188 AVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVE-KGTHDEL 243 (632)
Q Consensus 188 ~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~-~g~~~el 243 (632)
+||+.+...+.+.|+++ +.|+|+|||+...+.. ||+|++|++|++.. .|+++..
T Consensus 179 ~LD~~~~~~L~~~L~~~--~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~~ 234 (638)
T PRK10636 179 HLDLDAVIWLEKWLKSY--QGTLILISHDRDFLDPIVDKIIHIEQQSLFEYTGNYSSF 234 (638)
T ss_pred cCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEecCCHHHH
Confidence 99999999999998876 4699999999998865 99999999999964 5666554
No 78
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=99.98 E-value=1e-30 Score=292.60 Aligned_cols=157 Identities=21% Similarity=0.288 Sum_probs=116.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEEcccCccccc-ccccccccccCCC------
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLVSKEPIFLFC-DFNEGQYIPYGKQ------ 153 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v~Q~~~~~~~-~~~~~~~i~~~~~------ 153 (632)
.+||+|++|++++|+||||||||||+++|+|........ .+..++|++|++.++.. ++.+ |+.++..
T Consensus 23 ~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~~~tv~e--~i~~~~~~~~~~~ 100 (552)
T TIGR03719 23 DISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDPTKTVRE--NVEEGVAEIKDAL 100 (552)
T ss_pred CceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCCCCcHHH--HHHHhhHHHHHHH
Confidence 499999999999999999999999999999653322111 13569999999976532 4443 5544210
Q ss_pred -----------CCCH-------------------------HHHHHHHHHccc---hhhHhhCCccccccc----------
Q 047286 154 -----------NASD-------------------------EHIRPAVQLANA---EKSIDKLPLGLDTVV---------- 184 (632)
Q Consensus 154 -----------~~~~-------------------------~~~~~~~~~~~l---~~~i~~l~~g~~~~v---------- 184 (632)
.... +++.++++..++ +..+..||+|+++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~LSgGqkqrv~la~al~~~p 180 (552)
T TIGR03719 101 DRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPPWDADVTKLSGGERRRVALCRLLLSKP 180 (552)
T ss_pred HHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCcccCchhhcCHHHHHHHHHHHHHhcCC
Confidence 0001 122334444443 446788999999888
Q ss_pred -------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEE-EecChhHHhc
Q 047286 185 -------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIV-EKGTHDELIE 245 (632)
Q Consensus 185 -------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~-~~g~~~el~~ 245 (632)
+|++||+.+++.+.+.|+++ +.|+|+|||+++.+.. ||++++|++|+++ ..|+++++.+
T Consensus 181 ~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~d~v~~l~~g~i~~~~g~~~~~~~ 248 (552)
T TIGR03719 181 DMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVAGWILELDRGRGIPWEGNYSSWLE 248 (552)
T ss_pred CEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcCeEEEEECCEEEEecCCHHHHHH
Confidence 39999999999999999886 3599999999998876 9999999999976 6788877653
No 79
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=99.98 E-value=1.1e-30 Score=293.88 Aligned_cols=254 Identities=26% Similarity=0.371 Sum_probs=209.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++++|+++++..++.+++++..++.++..++.++.+.|.+.|
T Consensus 163 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (585)
T TIGR01192 163 MVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALA 242 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677777778888888888888899999999999999954
Q ss_pred ------------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCC--
Q 047286 44 ------------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKIN-- 80 (632)
Q Consensus 44 ------------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~-- 80 (632)
.+.+++|++ ...+..++.++.+++|+.++++.+++..
T Consensus 243 ~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 322 (585)
T TIGR01192 243 SGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEP 322 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Confidence 233455542 2345677899999999999997643210
Q ss_pred ------C--------------CC------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------C
Q 047286 81 ------P--------------YD------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------Y 119 (632)
Q Consensus 81 ------~--------------~~------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~ 119 (632)
+ ++ +.+||++++|++++|+||||||||||+++|.|... .
T Consensus 323 ~~~~~~~~~~~~i~~~~v~~~y~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~ 402 (585)
T TIGR01192 323 ADAPELPNVKGAVEFRHITFEFANSSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTV 402 (585)
T ss_pred ccCCCCCCCCCeEEEEEEEEECCCCCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhC
Confidence 0 00 01899999999999999999999999999985421 1
Q ss_pred CcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc---------------
Q 047286 120 APEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV--------------- 184 (632)
Q Consensus 120 ~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v--------------- 184 (632)
++..+|+.++||+|+|.+|.+++.+ |+.++.++.+++++.++++.+++++++.++|+|+++.+
T Consensus 403 ~~~~~~~~i~~v~q~~~lf~~ti~~--Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl 480 (585)
T TIGR01192 403 TRESLRKSIATVFQDAGLFNRSIRE--NIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRL 480 (585)
T ss_pred CHHHHHhheEEEccCCccCcccHHH--HHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHH
Confidence 2234678999999999999999987 78888777788999999999999999999999888766
Q ss_pred -----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCC
Q 047286 185 -----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 185 -----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
+|++||+.+++.+.+.|.++.+++|+|++||+++.++.||+|++|++|++++.|+++++.++
T Consensus 481 ~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~- 559 (585)
T TIGR01192 481 AIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK- 559 (585)
T ss_pred HHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC-
Confidence 39999999999999999998889999999999999999999999999999999999999876
Q ss_pred CcHHHHHHHHH
Q 047286 248 EGAYSQLVRLQ 258 (632)
Q Consensus 248 ~~~~~~~~~~~ 258 (632)
++.|.+++..+
T Consensus 560 ~~~y~~l~~~~ 570 (585)
T TIGR01192 560 DGRFYKLLRRS 570 (585)
T ss_pred CChHHHHHHhC
Confidence 67888887654
No 80
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.2e-31 Score=271.15 Aligned_cols=200 Identities=33% Similarity=0.551 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-----------------------------CcEEEEeeCCCEEEEEcCC
Q 047286 52 TSLNVNAFAAGQAAACKMFETIERIPKINPYD-----------------------------NRFLQHVPSGTTVALVGQS 102 (632)
Q Consensus 52 ~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~-----------------------------~~~~~~i~~Ge~~~ivG~s 102 (632)
++..+..+.+++.-.++++++++.+.++.... ..+||++++|+.++++|||
T Consensus 219 lg~~Yrei~q~ltdme~mfdLl~~~~~v~d~pda~~L~~~~~g~v~F~~V~F~y~~~r~iL~~isf~i~~g~tvAiVg~S 298 (497)
T COG5265 219 LGFSYREIRQALTDMEKMFDLLDVEAEVSDAPDAPPLWPVRLGAVAFINVSFAYDPRRPILNGISFTIPLGKTVAIVGES 298 (497)
T ss_pred hHHHHHHHHHhhhhHHHHHHhhccchhhccCCCCccccccccceEEEEEEEeeccccchhhcCccccccCccEEEEEeCC
Confidence 34557789999999999999998766542110 0189999999999999999
Q ss_pred CchHHHHHHHHHhCCCCCcH-----------------HhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHH
Q 047286 103 GSGKSTVINLVESFRFYAPE-----------------AEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQ 165 (632)
Q Consensus 103 GsGKSTLl~ll~~~~~~~~~-----------------~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (632)
|+||||+++++- |+|+++ .+|+.||.|||+..+|++++.. |+.++++..+++++..+++
T Consensus 299 G~gKsTI~rllf--RFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~y--ni~ygr~~at~eev~aaa~ 374 (497)
T COG5265 299 GAGKSTILRLLF--RFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAY--NIKYGRPDATAEEVGAAAE 374 (497)
T ss_pred CCcHHHHHHHHH--HHhCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHH--HHhccCccccHHHHHHHHH
Confidence 999999999997 777654 2688999999999999999988 7999999999999999999
Q ss_pred HccchhhHhhCCcccccccc--------------------------------cCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 047286 166 LANAEKSIDKLPLGLDTVVA--------------------------------TNAVDAQSERIVQAAMVKLVTNQTVVIV 213 (632)
Q Consensus 166 ~~~l~~~i~~l~~g~~~~v~--------------------------------ts~LD~~~~~~i~~~l~~~~~~~tviii 213 (632)
.+.+++++..+|.|+++.|+ ||+||.+++++++..|++...++|.++|
T Consensus 375 ~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlvi 454 (497)
T COG5265 375 AAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVI 454 (497)
T ss_pred HhhhhHHHHhCchhhhcccchheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEE
Confidence 99999999999999999883 9999999999999999999999999999
Q ss_pred ecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHH
Q 047286 214 ANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVR 256 (632)
Q Consensus 214 tH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~ 256 (632)
.|+++++-.||.|+||++|+|+|.|+|++|+.. ++.|.++|.
T Consensus 455 ahrlsti~~adeiivl~~g~i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 455 AHRLSTIIDADEIIVLDNGRIVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred eehhhhccCCceEEEeeCCEEEecCcHHHHHHc-CChHHHHhc
Confidence 999999999999999999999999999999988 889998873
No 81
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=99.97 E-value=1.2e-30 Score=294.62 Aligned_cols=252 Identities=35% Similarity=0.504 Sum_probs=209.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+.+|+++++..++.+...+..++.++..++.++.+.|.+.|
T Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (576)
T TIGR02204 166 LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLT 245 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777778888999999999999999999999999954
Q ss_pred -----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCC---
Q 047286 44 -----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKIN--- 80 (632)
Q Consensus 44 -----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~--- 80 (632)
.+.+++|.+ ...+..+++++++++|+.++++.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 325 (576)
T TIGR02204 246 AIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA 325 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Confidence 233444442 2346778999999999999986533210
Q ss_pred -------C---------------C-C-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------------
Q 047286 81 -------P---------------Y-D-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY------------- 119 (632)
Q Consensus 81 -------~---------------~-~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~------------- 119 (632)
+ . + +.+||++++||.++|+||||||||||+++|+|+...
T Consensus 326 ~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~ 405 (576)
T TIGR02204 326 HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLR 405 (576)
T ss_pred CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHH
Confidence 0 0 0 128999999999999999999999999999854221
Q ss_pred --CcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-------------
Q 047286 120 --APEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV------------- 184 (632)
Q Consensus 120 --~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v------------- 184 (632)
++..++++++|+||+|++|.+++++ |+.++.++.+++++.++++.+++.++++++|.|+++.+
T Consensus 406 ~~~~~~~~~~i~~~~Q~~~lf~~Ti~~--Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Q 483 (576)
T TIGR02204 406 QLDPAELRARMALVPQDPVLFAASVME--NIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQ 483 (576)
T ss_pred hcCHHHHHHhceEEccCCccccccHHH--HHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHH
Confidence 2334678899999999999999988 78888777788999999999999999999999998876
Q ss_pred -------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhc
Q 047286 185 -------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 185 -------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+||+||+.+++.+.+.++++.+++|+|+|||+++.+..||+|++|++|++++.|+++++.+
T Consensus 484 rl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 484 RIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 3999999999999999999888899999999999999999999999999999999999987
Q ss_pred CCCcHHHHHHHH
Q 047286 246 DPEGAYSQLVRL 257 (632)
Q Consensus 246 ~~~~~~~~~~~~ 257 (632)
. ++.|.+++..
T Consensus 564 ~-~~~~~~l~~~ 574 (576)
T TIGR02204 564 K-GGLYARLARL 574 (576)
T ss_pred c-CChHHHHHhh
Confidence 5 6778777643
No 82
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=99.97 E-value=2.7e-30 Score=316.53 Aligned_cols=197 Identities=23% Similarity=0.331 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCC--------CC-----C-------------------CcEEEEeeCCCEEEEEcCC
Q 047286 55 NVNAFAAGQAAACKMFETIERIPKIN--------PY-----D-------------------NRFLQHVPSGTTVALVGQS 102 (632)
Q Consensus 55 ~~~~~~~~~~a~~ri~~~~~~~~~~~--------~~-----~-------------------~~~~~~i~~Ge~~~ivG~s 102 (632)
.+..++.+.+|++|+.++++.+++.+ +. . +.+||+|++||.+||||+|
T Consensus 1242 ~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrT 1321 (1522)
T TIGR00957 1242 MSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRT 1321 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCC
Confidence 45678899999999999997654321 00 0 0199999999999999999
Q ss_pred CchHHHHHHHHHhCCCCCc-----------------HHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHH
Q 047286 103 GSGKSTVINLVESFRFYAP-----------------EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQ 165 (632)
Q Consensus 103 GsGKSTLl~ll~~~~~~~~-----------------~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (632)
|||||||+++|. ++++| ..+|+++++|||+|.+|.+|+++ |+.... +.+++++.++++
T Consensus 1322 GsGKSTL~~lL~--rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~--NLdp~~-~~sdeei~~al~ 1396 (1522)
T TIGR00957 1322 GAGKSSLTLGLF--RINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRM--NLDPFS-QYSDEEVWWALE 1396 (1522)
T ss_pred CCCHHHHHHHHh--cCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHH--HcCccc-CCCHHHHHHHHH
Confidence 999999999998 44443 34799999999999999999998 676322 578999999999
Q ss_pred HccchhhHhhCCccccccc--------------------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 047286 166 LANAEKSIDKLPLGLDTVV--------------------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIV 213 (632)
Q Consensus 166 ~~~l~~~i~~l~~g~~~~v--------------------------------~ts~LD~~~~~~i~~~l~~~~~~~tviii 213 (632)
.+++++++.++|+|++|.+ +||+||+++++.+++.|++..+++|+|+|
T Consensus 1397 ~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~I 1476 (1522)
T TIGR00957 1397 LAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTI 1476 (1522)
T ss_pred HcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999999888 39999999999999999998889999999
Q ss_pred ecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHHH
Q 047286 214 ANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVRL 257 (632)
Q Consensus 214 tH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~ 257 (632)
+|+++++..||+|++|++|+|+|.|+|+||+++ ++.|.++++.
T Consensus 1477 AHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~ 1519 (1522)
T TIGR00957 1477 AHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKD 1519 (1522)
T ss_pred ecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHH
Confidence 999999999999999999999999999999987 6888888754
No 83
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=99.97 E-value=5.6e-30 Score=286.63 Aligned_cols=240 Identities=23% Similarity=0.283 Sum_probs=197.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------------------------------
Q 047286 4 CLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP---------------------------------------- 43 (632)
Q Consensus 4 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~---------------------------------------- 43 (632)
.+|+++++..++.++.++..++.++..++.++.+.|.+.|
T Consensus 150 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (544)
T TIGR01842 150 GAVVLVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSN 229 (544)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666666777888888899999999999999999943
Q ss_pred ----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCCC---
Q 047286 44 ----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKINP--- 81 (632)
Q Consensus 44 ----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~~--- 81 (632)
.|.+++|++ ...+..+++++++++|+.++++.+++...
T Consensus 230 ~~~~~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 309 (544)
T TIGR01842 230 LSKYFRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAMP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Confidence 234455543 23456789999999999999976433110
Q ss_pred ----------------C--C-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHH
Q 047286 82 ----------------Y--D-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEA 123 (632)
Q Consensus 82 ----------------~--~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~ 123 (632)
+ . +++||++++|++++|+||||||||||+++|.|.... ++..
T Consensus 310 ~~~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~ 389 (544)
T TIGR01842 310 LPEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRET 389 (544)
T ss_pred CCCCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHH
Confidence 0 0 128999999999999999999999999999854211 1234
Q ss_pred hhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-------------------
Q 047286 124 EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV------------------- 184 (632)
Q Consensus 124 ~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v------------------- 184 (632)
+|+.++||+|+|++|.+++++ |+.++.++.+++++.++++.++++++++++|.|++|.+
T Consensus 390 ~~~~i~~v~q~~~lf~~ti~~--Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lAR 467 (544)
T TIGR01842 390 FGKHIGYLPQDVELFPGTVAE--NIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALAR 467 (544)
T ss_pred HhhheEEecCCcccccccHHH--HHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHH
Confidence 678899999999999999987 78766666788999999999999999999999998876
Q ss_pred -------------ccCCCCHHHHHHHHHHHHHHh-CCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhc
Q 047286 185 -------------ATNAVDAQSERIVQAAMVKLV-TNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 185 -------------~ts~LD~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+|++||+++++.+.+.++++. +++|+|++||+++.++.||+|++|++|++++.|+++++.+
T Consensus 468 all~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 468 ALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 399999999999999999985 5799999999999888899999999999999999999864
No 84
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=99.97 E-value=1.7e-28 Score=274.74 Aligned_cols=269 Identities=18% Similarity=0.160 Sum_probs=173.6
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HhH------------
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYL-KKK------------ 413 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~-~~~------------ 413 (632)
.|++++|+++|++.+...+. .+..++..++.+++.+++++.. |++++++++..|+.+...+. .++
T Consensus 104 ~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 182 (547)
T PRK10522 104 SASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETE 182 (547)
T ss_pred ccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 49999999999999998765 4666777777777777777766 99998887776665433211 110
Q ss_pred --------------H-----H------HHHH--------------------H----H-HHHHHhhhhHHhhcC-----Cc
Q 047286 414 --------------K-----N------YERL--------------------H----I-NAFCFFIGSKLVEHG-----DA 438 (632)
Q Consensus 414 --------------~-----~------~~~~--------------------~----~-~~~~~~~g~~~v~~g-----~~ 438 (632)
+ . +.+. . . ......++..++..+ ..
T Consensus 183 ~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (547)
T PRK10522 183 DKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSLGWADT 262 (547)
T ss_pred HHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh
Confidence 0 0 0000 0 0 000011222222221 22
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCC--------------------CCcc
Q 047286 439 TFGEVFKFLSEFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMT--------------------PSTV 498 (632)
Q Consensus 439 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~--------------------~~~~ 498 (632)
+...++.+.......++..........+.+..+.+|+.++++.+++.+.+...... ..+.
T Consensus 263 ~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~l~~i 342 (547)
T PRK10522 263 NVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFPRPQAFPDWQTLELRNVTFAYQDNGFSVGPI 342 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccCcCceEEEEEEEEEeCCCCeEEecc
Confidence 22222222222223456677777778889999999999987554322111100000 0000
Q ss_pred cccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH--------------------------H
Q 047286 499 RGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI--------------------------I 540 (632)
Q Consensus 499 ~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~--------------------------~ 540 (632)
+-+|+-++++|||||||||||||+++|+|+|+|++ ...... .
T Consensus 343 ~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~~~~~ 422 (547)
T PRK10522 343 NLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPEGKPANP 422 (547)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccccCchHH
Confidence 11222334899999999999999999999999854 000000 1
Q ss_pred HHHHHHHhcCCCccCcccccC---CCCCChHHHHHHHHHHHHhh------------------------------------
Q 047286 541 IKCTNFIASLPQGSDLNVGER---GLQLSGGLKQRIARTRARNY------------------------------------ 581 (632)
Q Consensus 541 ~~~~~~i~~lp~g~dt~vge~---G~~LSgGQrQRiaiARA~~~------------------------------------ 581 (632)
..+.+++..++.+.++..+++ |.+|||||||||+||||+++
T Consensus 423 ~~~~~~~~~~~l~~~~~~~~~~~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~t 502 (547)
T PRK10522 423 ALVEKWLERLKMAHKLELEDGRISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKT 502 (547)
T ss_pred HHHHHHHHHcCCchhhhccccCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCE
Confidence 145678888887777776665 89999999999999999655
Q ss_pred -hccccchhhhhcCCEEEEEeCCeEeee-cChHHHhcc
Q 047286 582 -CGCGSPPYHYKNADITSVVKNGVIAEK-GRHDALMKI 617 (632)
Q Consensus 582 -~~iahrl~~~~~aD~I~vl~~G~ive~-G~h~eL~~~ 617 (632)
+++|||+++++.||+|++|++|+|+|. |+|.+-..+
T Consensus 503 vi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~~~~~~~ 540 (547)
T PRK10522 503 IFAISHDDHYFIHADRLLEMRNGQLSELTGEERDAASR 540 (547)
T ss_pred EEEEEechHHHHhCCEEEEEECCEEEEecCCchhhhhh
Confidence 688999999999999999999999996 888877665
No 85
>PTZ00243 ABC transporter; Provisional
Probab=99.97 E-value=2.7e-29 Score=307.02 Aligned_cols=170 Identities=22% Similarity=0.370 Sum_probs=152.5
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC---------------CCCcHHhhcceEEEcccCccccccccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFR---------------FYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPY 150 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~---------------~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~ 150 (632)
+||+|++||.+||||+||||||||+++|.++- .++..++|++|+||||+|.+|.+|+++ |+..
T Consensus 1329 vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIre--NIdp 1406 (1560)
T PTZ00243 1329 VSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQ--NVDP 1406 (1560)
T ss_pred ceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHH--HhCc
Confidence 99999999999999999999999999998331 122345899999999999999999998 6765
Q ss_pred CCCCCCHHHHHHHHHHccchhhHhhCCccccccc---------------------------------ccCCCCHHHHHHH
Q 047286 151 GKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV---------------------------------ATNAVDAQSERIV 197 (632)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v---------------------------------~ts~LD~~~~~~i 197 (632)
. .+.+++++.++++.+++++++.++|.|++|.+ +||+||+++++.+
T Consensus 1407 ~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~I 1485 (1560)
T PTZ00243 1407 F-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQI 1485 (1560)
T ss_pred c-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHH
Confidence 4 35789999999999999999999999999877 3999999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHHHH
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVRLQ 258 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~ 258 (632)
++.|++..+++|+|+|+|+++++..||+|++|++|+|++.|+|+||++++++.|..+++.+
T Consensus 1486 q~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1486 QATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 9999998889999999999999999999999999999999999999986678898888654
No 86
>PLN03073 ABC transporter F family; Provisional
Probab=99.97 E-value=3.2e-29 Score=284.52 Aligned_cols=154 Identities=18% Similarity=0.193 Sum_probs=105.7
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-CcHHhhcceEEEcccCccccccc----------------------
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-APEAEQEKIGLVSKEPIFLFCDF---------------------- 142 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-~~~~~r~~i~~v~Q~~~~~~~~~---------------------- 142 (632)
+||+|++|+++|||||||||||||+++|+|.... .| -...|+|++|++.....+.
T Consensus 196 isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~~g~p--~~g~I~~~~Q~~~g~~~t~~~~v~~~~~~~~~~~~~~~~~~ 273 (718)
T PLN03073 196 ASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAIDGIP--KNCQILHVEQEVVGDDTTALQCVLNTDIERTQLLEEEAQLV 273 (718)
T ss_pred CEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCC--CCCEEEEEeccCCCCCCCHHHHHHHhhHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999864210 11 1245777777632110000
Q ss_pred -----------ccccccc--cCCC-C-------------------CCHHHHHHHHHHccc-----hhhHhhCCccccccc
Q 047286 143 -----------NEGQYIP--YGKQ-N-------------------ASDEHIRPAVQLANA-----EKSIDKLPLGLDTVV 184 (632)
Q Consensus 143 -----------~~~~~i~--~~~~-~-------------------~~~~~~~~~~~~~~l-----~~~i~~l~~g~~~~v 184 (632)
..+.... .+.. . ..++++.+++...++ +..+..||+|..+++
T Consensus 274 ~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~r~~~~L~~lgl~~~~~~~~~~~LSgG~k~rv 353 (718)
T PLN03073 274 AQQRELEFETETGKGKGANKDGVDKDAVSQRLEEIYKRLELIDAYTAEARAASILAGLSFTPEMQVKATKTFSGGWRMRI 353 (718)
T ss_pred HHHHHhhhcccccccccccccccchHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHCCCChHHHhCchhhCCHHHHHHH
Confidence 0000000 0000 0 001223334444444 234678999998887
Q ss_pred -----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEE-EecChhHH
Q 047286 185 -----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIV-EKGTHDEL 243 (632)
Q Consensus 185 -----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~-~~g~~~el 243 (632)
+|++||+.+...+.+.|+++ +.|+|+|||+...+.. ||+|++|++|++. ..|++++.
T Consensus 354 ~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~~tviivsHd~~~l~~~~d~i~~l~~g~i~~~~g~~~~~ 429 (718)
T PLN03073 354 ALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKW--PKTFIVVSHAREFLNTVVTDILHLHGQKLVTYKGDYDTF 429 (718)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 39999999999999999886 6799999999999876 9999999999996 56776654
No 87
>PLN03140 ABC transporter G family member; Provisional
Probab=99.97 E-value=1.1e-27 Score=289.30 Aligned_cols=159 Identities=15% Similarity=0.207 Sum_probs=118.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------cH--HhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------PE--AEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------~~--~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
++|+.+++|++++|+||||||||||+|+|+|..... .. ..++.++||+|++.++. .++..+++.
T Consensus 183 ~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~-~lTV~EtL~ 261 (1470)
T PLN03140 183 DASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVG-VMTVKETLD 261 (1470)
T ss_pred CCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCC-cCcHHHHHH
Confidence 499999999999999999999999999998653211 00 12567999999976443 333333554
Q ss_pred cCCC------------CCC-H---------H------------------HHHHHHHHccchh---------hHhhCCccc
Q 047286 150 YGKQ------------NAS-D---------E------------------HIRPAVQLANAEK---------SIDKLPLGL 180 (632)
Q Consensus 150 ~~~~------------~~~-~---------~------------------~~~~~~~~~~l~~---------~i~~l~~g~ 180 (632)
+... ... . + .++.+++..++++ .+..+|+|+
T Consensus 262 f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGe 341 (1470)
T PLN03140 262 FSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQ 341 (1470)
T ss_pred HHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCccc
Confidence 3210 000 0 0 1244666666643 456899999
Q ss_pred ccccc-----------------cCCCCHHHHHHHHHHHHHHh--CCceEEEEecCch-H-HhhcCeEEEEeCCeEEEecC
Q 047286 181 DTVVA-----------------TNAVDAQSERIVQAAMVKLV--TNQTVVIVANCLI-T-IRNADCIIMVSKGKIVEKGT 239 (632)
Q Consensus 181 ~~~v~-----------------ts~LD~~~~~~i~~~l~~~~--~~~tviiitH~~~-~-~~~aD~i~vl~~G~i~~~g~ 239 (632)
++++. |+|||+.+...+.+.|+++. .++|+|+++|++. . ...+|+|++|++|+++..|+
T Consensus 342 rkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~ 421 (1470)
T PLN03140 342 KKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGP 421 (1470)
T ss_pred ceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCC
Confidence 98883 89999999999999999985 3789999999863 4 45699999999999999999
Q ss_pred hhHHh
Q 047286 240 HDELI 244 (632)
Q Consensus 240 ~~el~ 244 (632)
.+++.
T Consensus 422 ~~~~~ 426 (1470)
T PLN03140 422 RDHIL 426 (1470)
T ss_pred HHHHH
Confidence 99875
No 88
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=3.1e-28 Score=283.68 Aligned_cols=192 Identities=29% Similarity=0.277 Sum_probs=137.6
Q ss_pred cCCcCHHHHHHHHHHHHH--HHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCC-----------------------CCC
Q 047286 435 HGDATFGEVFKFLSEFGC--FWCLESTAVAPNADKAKGSAASIFEILESKPKID-----------------------WSS 489 (632)
Q Consensus 435 ~g~~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~-----------------------~~~ 489 (632)
.+.++....+..++.+.. .++...........++.++.+|+.+++..+.... |..
T Consensus 451 ~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~i~~~sfsW~~ 530 (1381)
T KOG0054|consen 451 GNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIEIKNGSFSWDS 530 (1381)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEEEeeeeEecCC
Confidence 445666555555533331 2333344445556678899999999986543211 111
Q ss_pred CCCC-CCCcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh-----------------------------------
Q 047286 490 KDGM-TPSTVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ----------------------------------- 533 (632)
Q Consensus 490 ~~~~-~~~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~----------------------------------- 533 (632)
++.. ...+++-+|.-++.+||||++|||||||++.+.|-.+..+
T Consensus 531 ~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvreNILFG~~~d~ 610 (1381)
T KOG0054|consen 531 ESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVRENILFGSPYDE 610 (1381)
T ss_pred CCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHHHhhhcCccccH
Confidence 0000 0111122344455899999999999999999998644311
Q ss_pred --hcHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------------
Q 047286 534 --VIYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------------ 581 (632)
Q Consensus 534 --~~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------------ 581 (632)
+........+.+.++.||.|-.|+|||+|.||||||||||+||||..+
T Consensus 611 ~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~ 690 (1381)
T KOG0054|consen 611 ERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGL 690 (1381)
T ss_pred HHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhh
Confidence 222222335668899999999999999999999999999999999433
Q ss_pred ------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHH
Q 047286 582 ------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTA 627 (632)
Q Consensus 582 ------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~ 627 (632)
|.+||.++.+++||+|+||+||+|+|+|||+||++. ++.|.+|.+
T Consensus 691 L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~-~~~~~~l~~ 741 (1381)
T KOG0054|consen 691 LRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKS-GGDFAELAH 741 (1381)
T ss_pred hcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhc-chhHHHHhh
Confidence 899999999999999999999999999999999987 888888853
No 89
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=99.97 E-value=6.4e-27 Score=284.05 Aligned_cols=159 Identities=16% Similarity=0.281 Sum_probs=127.8
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccccccccccccccC
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLFCDFNEGQYIPYG 151 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~ 151 (632)
+||++++||+++|+||||||||||+++|.|+...+ ....|+.+||++|++.++. .++..+++.+.
T Consensus 949 lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~-~LTV~E~L~f~ 1027 (2272)
T TIGR01257 949 LNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQSLGMCPQHNILFH-HLTVAEHILFY 1027 (2272)
T ss_pred eEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcchHHHHhhcEEEEecCCcCCC-CCCHHHHHHHH
Confidence 99999999999999999999999999998763211 1235678999999987654 33333356542
Q ss_pred C--CCC----CHHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHH
Q 047286 152 K--QNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKL 204 (632)
Q Consensus 152 ~--~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~ 204 (632)
. ... ..+++.+.++..++.+ .+.+||+|++++++ |++||+.+++.+++.|+++
T Consensus 1028 ~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l 1107 (2272)
T TIGR01257 1028 AQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKY 1107 (2272)
T ss_pred HHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHH
Confidence 1 111 1345677888888754 46789999998883 9999999999999999999
Q ss_pred hCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 205 VTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 205 ~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
++++|+|++||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 1108 ~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~ 1149 (2272)
T TIGR01257 1108 RSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKN 1149 (2272)
T ss_pred hCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHH
Confidence 778999999999999875 99999999999999999998864
No 90
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=99.97 E-value=3.3e-29 Score=284.19 Aligned_cols=158 Identities=18% Similarity=0.257 Sum_probs=112.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh----hcceEEEcccCcccc-cccccc--------------
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE----QEKIGLVSKEPIFLF-CDFNEG-------------- 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~----r~~i~~v~Q~~~~~~-~~~~~~-------------- 145 (632)
.+||+|++|++++|+||||||||||+++|+|....+...+ ...++|++|.+.... .++.+.
T Consensus 21 ~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~~~~~l~q~~~~~~~~~v~~~~~~~~~~~~~~~~~ 100 (635)
T PRK11147 21 NAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDLIVARLQQDPPRNVEGTVYDFVAEGIEEQAEYLKR 100 (635)
T ss_pred CcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCCEEEEeccCCCCCCCCCHHHHHHHhhHHHHHHHHH
Confidence 3999999999999999999999999999996533222111 123678887652110 111000
Q ss_pred --------------ccccc--------CC--CCCCHHHHHHHHHHccc--hhhHhhCCcccccccc--------------
Q 047286 146 --------------QYIPY--------GK--QNASDEHIRPAVQLANA--EKSIDKLPLGLDTVVA-------------- 185 (632)
Q Consensus 146 --------------~~i~~--------~~--~~~~~~~~~~~~~~~~l--~~~i~~l~~g~~~~v~-------------- 185 (632)
+++.. .. ......++.++++..++ +..+..||+|++++++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~~~~LSgGekqRv~LAraL~~~P~lLLL 180 (635)
T PRK11147 101 YHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLDPDAALSSLSGGWLRKAALGRALVSNPDVLLL 180 (635)
T ss_pred HHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCCCCCchhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 00000 00 00123456667777765 4567899999998883
Q ss_pred ---cCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEE-ecChhHHh
Q 047286 186 ---TNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVE-KGTHDELI 244 (632)
Q Consensus 186 ---ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~-~g~~~el~ 244 (632)
|++||+.+.+.+.+.|+++. .|+|+|||+...+.. ||+|++|++|+++. .|++++..
T Consensus 181 DEPt~~LD~~~~~~L~~~L~~~~--~tvlivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~~~ 242 (635)
T PRK11147 181 DEPTNHLDIETIEWLEGFLKTFQ--GSIIFISHDRSFIRNMATRIVDLDRGKLVSYPGNYDQYL 242 (635)
T ss_pred cCCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHhcCeEEEEECCEEEEecCCHHHHH
Confidence 99999999999999999873 599999999998865 99999999999974 57776654
No 91
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=99.96 E-value=1.7e-28 Score=274.16 Aligned_cols=225 Identities=28% Similarity=0.378 Sum_probs=185.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+.+|+++++..++.++.++..++.++..++.++.+.|.+.|
T Consensus 152 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (529)
T TIGR02857 152 LTAPLIPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSS 231 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666677788888888999999999999999999954
Q ss_pred -----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhccCCCCC---
Q 047286 44 -----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIERIPKIN--- 80 (632)
Q Consensus 44 -----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~~~~~~--- 80 (632)
.+.+++|.+ ...+..+++++.+++|+.++++.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~ 311 (529)
T TIGR02857 232 AVLELFATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA 311 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc
Confidence 223444432 2346778999999999999997432210
Q ss_pred -----C--------------CC-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------CCc
Q 047286 81 -----P--------------YD-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------YAP 121 (632)
Q Consensus 81 -----~--------------~~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~~~ 121 (632)
. .. +.+|+++++|++++|+||||||||||+++|.|+.. .++
T Consensus 312 ~~~~~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~ 391 (529)
T TIGR02857 312 PVTAAPAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADA 391 (529)
T ss_pred CCCCCCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCH
Confidence 0 00 12899999999999999999999999999985421 123
Q ss_pred HHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------
Q 047286 122 EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV----------------- 184 (632)
Q Consensus 122 ~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v----------------- 184 (632)
..+|++++||+|+|++|.+++++ |+.++.++.+++++.++++.++++++++++|+|++|.+
T Consensus 392 ~~lr~~i~~v~Q~~~lf~~ti~~--Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~l 469 (529)
T TIGR02857 392 DSWRDQIAWVPQHPFLFAGTIAE--NIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLAL 469 (529)
T ss_pred HHHHhheEEEcCCCcccCcCHHH--HHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHH
Confidence 44788999999999999999998 78888777788999999999999999999999999877
Q ss_pred ---------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhcCeEEEE
Q 047286 185 ---------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNADCIIMV 229 (632)
Q Consensus 185 ---------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl 229 (632)
+||+||+++++.+.+.++++.+++|+|+|||+++.++.||+|++|
T Consensus 470 aRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 470 ARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 299999999999999999988889999999999999999999885
No 92
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=99.96 E-value=2.6e-28 Score=252.38 Aligned_cols=196 Identities=23% Similarity=0.364 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC---------------------CC-----CcEEEEeeCCCEEEEEcCC
Q 047286 49 LGQTSLNVNAFAAGQAAACKMFETIERIPKINP---------------------YD-----NRFLQHVPSGTTVALVGQS 102 (632)
Q Consensus 49 ~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~---------------------~~-----~~~~~~i~~Ge~~~ivG~s 102 (632)
+.+...++..|..++.|.+|+.+.+...|...+ .. ..+||++++||.++|||||
T Consensus 292 id~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m~LP~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPS 371 (580)
T COG4618 292 IDLAIANWKQFVAARQSYKRLNELLAELPAAAERMPLPAPQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPS 371 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCCCCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCC
Confidence 334567899999999999999999987654211 00 1299999999999999999
Q ss_pred CchHHHHHHHHHhC---------------CCCCcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHc
Q 047286 103 GSGKSTVINLVESF---------------RFYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLA 167 (632)
Q Consensus 103 GsGKSTLl~ll~~~---------------~~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 167 (632)
|||||||.|+|.|. +.++++.+-++|||.||+..+|.+|+.+ ||.-..++.+.+++.++.+.+
T Consensus 372 gSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIae--NIaRf~~~~d~~kIieAA~lA 449 (580)
T COG4618 372 GSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAE--NIARFGEEADPEKVIEAARLA 449 (580)
T ss_pred CccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHH--HHHhccccCCHHHHHHHHHHc
Confidence 99999999999653 3456677788999999999999999998 686555678899999999999
Q ss_pred cchhhHhhCCcccccccc--------------------------------cCCCCHHHHHHHHHHHHHHh-CCceEEEEe
Q 047286 168 NAEKSIDKLPLGLDTVVA--------------------------------TNAVDAQSERIVQAAMVKLV-TNQTVVIVA 214 (632)
Q Consensus 168 ~l~~~i~~l~~g~~~~v~--------------------------------ts~LD~~~~~~i~~~l~~~~-~~~tviiit 214 (632)
+.|+.|.++|+||+|.|+ -|+||.+.|+.+.++|...+ +|.|+|+||
T Consensus 450 gvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvvia 529 (580)
T COG4618 450 GVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIA 529 (580)
T ss_pred ChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEe
Confidence 999999999999999994 58999999999999999986 588999999
Q ss_pred cCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 215 NCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 215 H~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|+++.+..+|+|++|++|++...|+.+|++.+
T Consensus 530 HRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 530 HRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred cCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999999999998754
No 93
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=99.96 E-value=1.2e-27 Score=292.48 Aligned_cols=200 Identities=16% Similarity=0.270 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCC--------------------------CCCC--------------------cEEEE
Q 047286 56 VNAFAAGQAAACKMFETIERIPKIN--------------------------PYDN--------------------RFLQH 89 (632)
Q Consensus 56 ~~~~~~~~~a~~ri~~~~~~~~~~~--------------------------~~~~--------------------~~~~~ 89 (632)
+..+..++.|.+|+.++++.+++.. +... .+||+
T Consensus 1162 ~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~ 1241 (1490)
T TIGR01271 1162 SIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFS 1241 (1490)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEE
Confidence 4567888999999999987654321 0000 18999
Q ss_pred eeCCCEEEEEcCCCchHHHHHHHHHhCCC--------------CCcHHhhcceEEEcccCcccccccccccccccCCCCC
Q 047286 90 VPSGTTVALVGQSGSGKSTVINLVESFRF--------------YAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNA 155 (632)
Q Consensus 90 i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--------------~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~ 155 (632)
|++||.+||||+||||||||+++|.++.. .+...+|++++||||+|.+|.+|+++ |+.... ..
T Consensus 1242 I~~GekvaIvGrSGsGKSTLl~lL~rl~~~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~--NLdp~~-~~ 1318 (1490)
T TIGR01271 1242 VEGGQRVGLLGRTGSGKSTLLSALLRLLSTEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRK--NLDPYE-QW 1318 (1490)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHhhhcCCCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHH--HhCccc-CC
Confidence 99999999999999999999999985421 12345799999999999999999998 665432 46
Q ss_pred CHHHHHHHHHHccchhhHhhCCccccccc--------------------------------ccCCCCHHHHHHHHHHHHH
Q 047286 156 SDEHIRPAVQLANAEKSIDKLPLGLDTVV--------------------------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 156 ~~~~~~~~~~~~~l~~~i~~l~~g~~~~v--------------------------------~ts~LD~~~~~~i~~~l~~ 203 (632)
+++++.++++.+++++++.++|+|+++.+ +||+||+++++.+++.|++
T Consensus 1319 tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~ 1398 (1490)
T TIGR01271 1319 SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQ 1398 (1490)
T ss_pred CHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 89999999999999999999999998877 3999999999999999999
Q ss_pred HhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHHHHh
Q 047286 204 LVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVRLQE 259 (632)
Q Consensus 204 ~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~~ 259 (632)
..+++|+|+|||+++.+..||+|++|++|+|++.|+|++|++. ++.|.++++...
T Consensus 1399 ~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1399 SFSNCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAAD 1453 (1490)
T ss_pred HcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhC
Confidence 8889999999999999999999999999999999999999974 678888876543
No 94
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.96 E-value=6.7e-29 Score=231.66 Aligned_cols=165 Identities=25% Similarity=0.340 Sum_probs=134.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----------------CcHHhhcceEEEcccCccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----------------APEAEQEKIGLVSKEPIFLFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i 148 (632)
.+|++|++||+++|+|||||||||||+||.++..+ +...+|+++|+|+|+..+|+ ..+..+|+
T Consensus 20 gi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP-HlTvleNv 98 (240)
T COG1126 20 GISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP-HLTVLENV 98 (240)
T ss_pred CcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcCeecccccccc-cchHHHHH
Confidence 39999999999999999999999999999755322 12347899999999988764 45555577
Q ss_pred ccCCC---CCC----HHHHHHHHHHccchhhHh----hCCcccccccc-----------------cCCCCHHHHHHHHHH
Q 047286 149 PYGKQ---NAS----DEHIRPAVQLANAEKSID----KLPLGLDTVVA-----------------TNAVDAQSERIVQAA 200 (632)
Q Consensus 149 ~~~~~---~~~----~~~~~~~~~~~~l~~~i~----~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~ 200 (632)
.++.. ..+ .++..+.++.+++.+..+ +||+|++++|+ ||||||+...++.+.
T Consensus 99 ~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~v 178 (240)
T COG1126 99 TLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDV 178 (240)
T ss_pred HhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHH
Confidence 76531 122 344556777888776655 55678888884 999999999999999
Q ss_pred HHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcH
Q 047286 201 MVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGA 250 (632)
Q Consensus 201 l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~ 250 (632)
++++. +|.|.++|||++..++. ||||++|++|+|+++|+++++..+|.+.
T Consensus 179 m~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~~ 230 (240)
T COG1126 179 MKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKSE 230 (240)
T ss_pred HHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCCH
Confidence 99996 47899999999999987 9999999999999999999999887654
No 95
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=99.96 E-value=7e-28 Score=269.26 Aligned_cols=159 Identities=26% Similarity=0.417 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCC-----------C-------------CC------CcEEEEeeCCCEEEEEcCCCc
Q 047286 55 NVNAFAAGQAAACKMFETIERIPKIN-----------P-------------YD------NRFLQHVPSGTTVALVGQSGS 104 (632)
Q Consensus 55 ~~~~~~~~~~a~~ri~~~~~~~~~~~-----------~-------------~~------~~~~~~i~~Ge~~~ivG~sGs 104 (632)
.+..+++++++++|+.++++.+++.+ + ++ +++||++++||+++|+|||||
T Consensus 293 ~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~vL~~isl~i~~G~~vaIvG~SGs 372 (529)
T TIGR02868 293 AAQALTRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPGSPPVLDGVSLDLPPGERVAILGPSGS 372 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCCCCceeecceEEEcCCCEEEEECCCCC
Confidence 35678999999999999997654310 0 00 128999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCc----------------HHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHcc
Q 047286 105 GKSTVINLVESFRFYAP----------------EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLAN 168 (632)
Q Consensus 105 GKSTLl~ll~~~~~~~~----------------~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 168 (632)
|||||+++|.| +++| .++|++++||||+|++|++|+++ |+.++.++.+++++.++++.++
T Consensus 373 GKSTLl~lL~g--~~~p~~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~e--NI~~g~~~~~~e~i~~al~~a~ 448 (529)
T TIGR02868 373 GKSTLLMLLTG--LLDPLQGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRD--NLRLGRPDATDEELWAALERVG 448 (529)
T ss_pred CHHHHHHHHhc--CCCCCCcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHH--HHhccCCCCCHHHHHHHHHHcC
Confidence 99999999984 3433 34678999999999999999998 7999988889999999999999
Q ss_pred chhhHhhCCccccccc--------------------------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecC
Q 047286 169 AEKSIDKLPLGLDTVV--------------------------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANC 216 (632)
Q Consensus 169 l~~~i~~l~~g~~~~v--------------------------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~ 216 (632)
+++++.++|+|++|.+ +||+||+++++.+++.+.+..+++|+|+|||+
T Consensus 449 l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHr 528 (529)
T TIGR02868 449 LADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHH 528 (529)
T ss_pred CHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 9999999999999987 29999999999999999998889999999998
Q ss_pred c
Q 047286 217 L 217 (632)
Q Consensus 217 ~ 217 (632)
+
T Consensus 529 l 529 (529)
T TIGR02868 529 L 529 (529)
T ss_pred C
Confidence 5
No 96
>PRK13409 putative ATPase RIL; Provisional
Probab=99.95 E-value=6e-28 Score=269.45 Aligned_cols=141 Identities=18% Similarity=0.187 Sum_probs=103.6
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc------------------HH-------h---hcceEEEcc----
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP------------------EA-------E---QEKIGLVSK---- 133 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~------------------~~-------~---r~~i~~v~Q---- 133 (632)
++ ++++|++++|+||||||||||+|+|+|....+. .+ . +.++++.+|
T Consensus 93 l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~q~~~~ 171 (590)
T PRK13409 93 LP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKLYNGEIKVVHKPQYVDL 171 (590)
T ss_pred CC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHHhccCcceeecccchhh
Confidence 66 789999999999999999999999986522110 00 0 122455555
Q ss_pred cCcccccccccccccccCCCCCCHHHHHHHHHHccch----hhHhhCCcccccccc-----------------cCCCCHH
Q 047286 134 EPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAE----KSIDKLPLGLDTVVA-----------------TNAVDAQ 192 (632)
Q Consensus 134 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v~-----------------ts~LD~~ 192 (632)
.|.+|..++.+ ++... ...+++.++++..++. ..+.+||+|+.++++ |++||+.
T Consensus 172 ~p~~~~~tv~e--~l~~~---~~~~~~~~~l~~l~l~~~~~~~~~~LSgGe~qrv~ia~al~~~p~lllLDEPts~LD~~ 246 (590)
T PRK13409 172 IPKVFKGKVRE--LLKKV---DERGKLDEVVERLGLENILDRDISELSGGELQRVAIAAALLRDADFYFFDEPTSYLDIR 246 (590)
T ss_pred hhhhhcchHHH--HHHhh---hHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHH
Confidence 34334444443 44321 1234567778777764 457789999998873 9999999
Q ss_pred HHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCC
Q 047286 193 SERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKG 232 (632)
Q Consensus 193 ~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G 232 (632)
++..+.+.|+++.+++|+|++||+++.+.. ||+|++|+++
T Consensus 247 ~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~ 287 (590)
T PRK13409 247 QRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGE 287 (590)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 999999999998668899999999999876 9999999763
No 97
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=99.95 E-value=9.6e-28 Score=228.30 Aligned_cols=168 Identities=21% Similarity=0.329 Sum_probs=137.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhC---------------CCCCcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESF---------------RFYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~---------------~~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
++||+|++||+++++|||||||||+||+|..+ ..+++.++|++||||-|+..+|+ .++..+||.
T Consensus 19 ~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFP-h~Tv~eNIa 97 (309)
T COG1125 19 DVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFP-HLTVAENIA 97 (309)
T ss_pred eeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhhhhhcccCC-CccHHHHHH
Confidence 39999999999999999999999999999733 12345668999999999988765 445455776
Q ss_pred cCCC------CCCHHHHHHHHHHccchh------hHhhCCcccccccc-----------------cCCCCHHHHHHHHHH
Q 047286 150 YGKQ------NASDEHIRPAVQLANAEK------SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAA 200 (632)
Q Consensus 150 ~~~~------~~~~~~~~~~~~~~~l~~------~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~ 200 (632)
.-.. ...++++++.++.++++. +..+||+|.+++|+ ++||||.++..+++.
T Consensus 98 ~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e 177 (309)
T COG1125 98 TVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEE 177 (309)
T ss_pred hhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHH
Confidence 5321 223456778888888753 34567789999984 899999999999999
Q ss_pred HHHHhC--CceEEEEecCchHH-hhcCeEEEEeCCeEEEecChhHHhcCCCcHHHH
Q 047286 201 MVKLVT--NQTVVIVANCLITI-RNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQ 253 (632)
Q Consensus 201 l~~~~~--~~tviiitH~~~~~-~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 253 (632)
++++.+ ++|+|+||||++++ +.+|||.+|++|+|+..++|++++.+|.+.|-+
T Consensus 178 ~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV~ 233 (309)
T COG1125 178 IKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFVE 233 (309)
T ss_pred HHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHHHH
Confidence 999864 79999999999776 559999999999999999999999988776653
No 98
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.95 E-value=2.1e-27 Score=232.92 Aligned_cols=167 Identities=20% Similarity=0.374 Sum_probs=136.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC------------------cHHhhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA------------------PEAEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~------------------~~~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
++||+|++||++||+|.||||||||++|+.++..++ ....|++||++||++.++. +.+..+
T Consensus 24 ~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLs-srTV~~ 102 (339)
T COG1135 24 DVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLS-SRTVFE 102 (339)
T ss_pred cceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHHHhhccEEeccccccc-cchHHh
Confidence 399999999999999999999999999997553221 1236889999999998765 333344
Q ss_pred ccccCCC--CC----CHHHHHHHHHHccchhhHh----hCCcccccccc-----------------cCCCCHHHHHHHHH
Q 047286 147 YIPYGKQ--NA----SDEHIRPAVQLANAEKSID----KLPLGLDTVVA-----------------TNAVDAQSERIVQA 199 (632)
Q Consensus 147 ~i~~~~~--~~----~~~~~~~~~~~~~l~~~i~----~l~~g~~~~v~-----------------ts~LD~~~~~~i~~ 199 (632)
|+.|..+ .. ..+++.+.++.+++.+..+ +||+|++++|+ ||||||++.+.|.+
T Consensus 103 NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~ 182 (339)
T COG1135 103 NVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILE 182 (339)
T ss_pred hhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHH
Confidence 7877532 12 2456778888899876654 56688999883 99999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 200 AMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
.|+++.+ |-|+++|||.++.++. ||||.+|++|+++|+|+..+++.+|.....
T Consensus 183 LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk~~~t 238 (339)
T COG1135 183 LLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPKHAIT 238 (339)
T ss_pred HHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcchHHH
Confidence 9999864 7899999999999987 999999999999999999999988765443
No 99
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.7e-27 Score=221.17 Aligned_cols=163 Identities=22% Similarity=0.347 Sum_probs=136.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC------------------C----CCcHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFR------------------F----YAPEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~------------------~----~~~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+|++|++++++|++|||||||||+|+++..+. . .++.++|+++|+|+|.|.-|+.++
T Consensus 25 ~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPFp~SI 104 (253)
T COG1117 25 DINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPFPMSI 104 (253)
T ss_pred cCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCCCchH
Confidence 399999999999999999999999999985321 1 134568999999999999999999
Q ss_pred ccccccccCCCC------CCHHHHHHHHHHccchhhH--------hhCCcccccccc-----------------cCCCCH
Q 047286 143 NEGQYIPYGKQN------ASDEHIRPAVQLANAEKSI--------DKLPLGLDTVVA-----------------TNAVDA 191 (632)
Q Consensus 143 ~~~~~i~~~~~~------~~~~~~~~~~~~~~l~~~i--------~~l~~g~~~~v~-----------------ts~LD~ 191 (632)
.+ |+.+|.+. .-++.++++++.+.+++.+ ..|++|++++++ ||||||
T Consensus 105 yd--NVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDP 182 (253)
T COG1117 105 YD--NVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDP 182 (253)
T ss_pred HH--HHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCc
Confidence 88 78887431 1134466777777766543 358899998883 999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
.+...|.+.|.+++++-|+|+|||+++.+.+ +|+..++..|+++|.|+.++++.+|..
T Consensus 183 IsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~P~~ 241 (253)
T COG1117 183 ISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTNPKH 241 (253)
T ss_pred hhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcCccH
Confidence 9999999999999999999999999988766 999999999999999999999987643
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=99.94 E-value=4.2e-25 Score=251.04 Aligned_cols=253 Identities=15% Similarity=0.072 Sum_probs=170.3
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHhH------------
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFT-A-WKLAFITLAVPSLTIAEGYLKKK------------ 413 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~-~-~~l~lv~l~~~~l~~~~~~~~~~------------ 413 (632)
.|++.+|+++|++.+.+.+...+..++..++.+++.++.++. . |.++++.++..|+.+....+..+
T Consensus 194 ~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~ 273 (659)
T TIGR00954 194 IQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQAL 273 (659)
T ss_pred CCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 489999999999999999999999999999988877776664 5 98888877777766543322111
Q ss_pred ----------------------------HHHHH----H--------------------HH----HHHHH-hhhhHHhh--
Q 047286 414 ----------------------------KNYER----L--------------------HI----NAFCF-FIGSKLVE-- 434 (632)
Q Consensus 414 ----------------------------~~~~~----~--------------------~~----~~~~~-~~g~~~v~-- 434 (632)
..+.+ . .. ..+.+ +.|...+.
T Consensus 274 ~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~ 353 (659)
T TIGR00954 274 EGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKT 353 (659)
T ss_pred HHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 00000 0 00 01111 22332332
Q ss_pred ---cCCcCHHHHHH-HHHH-----HHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCC--------CC-CC-----
Q 047286 435 ---HGDATFGEVFK-FLSE-----FGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDW--------SS-KD----- 491 (632)
Q Consensus 435 ---~g~~s~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~--------~~-~~----- 491 (632)
.|.+|+|.+++ |+.. ....++..+.....+++.+..+.+|++++++.+++... +. .+
T Consensus 354 ~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (659)
T TIGR00954 354 HPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGG 433 (659)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence 27889998776 3322 12234666777778889999999999999875332110 00 00
Q ss_pred --------CCCCCcccccEEEee-----------------------EEEEEecCCCChHHHHHhhhcCCChhh-------
Q 047286 492 --------GMTPSTVRGDIVFEH-----------------------TVALVGENGNGKSTVISLAERFHNPEQ------- 533 (632)
Q Consensus 492 --------~~~~~~~~g~I~f~~-----------------------~vaIVG~SGsGKSTL~~ll~r~y~~~~------- 533 (632)
........+.|+|+| ++||+||||||||||+++|.|+|+|++
T Consensus 434 ~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~ 513 (659)
T TIGR00954 434 RNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA 513 (659)
T ss_pred ccccccccccccccCCCeEEEEeeEEECCCCCeeeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC
Confidence 000000112233332 799999999999999999999987732
Q ss_pred ---------------------hcH-------------HHH------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHH
Q 047286 534 ---------------------VIY-------------SWI------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRI 573 (632)
Q Consensus 534 ---------------------~~~-------------~~~------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRi 573 (632)
+.. ... ..++++++.. |.||||..+ .+.+||||||||+
T Consensus 514 ~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl 591 (659)
T TIGR00954 514 KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRI 591 (659)
T ss_pred CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHH
Confidence 000 000 1145577766 999999986 5779999999999
Q ss_pred HHHHHHhh---------------------------------hccccchhhhhcCCEEEEEeC
Q 047286 574 ARTRARNY---------------------------------CGCGSPPYHYKNADITSVVKN 602 (632)
Q Consensus 574 aiARA~~~---------------------------------~~iahrl~~~~~aD~I~vl~~ 602 (632)
+||||+++ +++|||+++++.||+|++|++
T Consensus 592 ~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 592 AMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREFGITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHcCCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999665 789999999999999999974
No 101
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=99.94 E-value=5.6e-26 Score=247.19 Aligned_cols=154 Identities=21% Similarity=0.305 Sum_probs=110.4
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh--h--cceEEEcccCccccc-ccccccccccCCCC------
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE--Q--EKIGLVSKEPIFLFC-DFNEGQYIPYGKQN------ 154 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~--r--~~i~~v~Q~~~~~~~-~~~~~~~i~~~~~~------ 154 (632)
+++++.+|+.+||||+||||||||||+|.|....+...+ . -+++|++|++..... ++.+ .+..+...
T Consensus 22 ~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~~~tv~~--~v~~~~~~~~~~~~ 99 (530)
T COG0488 22 VSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDPEKTVLD--YVIEGFGELRELLA 99 (530)
T ss_pred CcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCCCccHHH--HHHhhhHHHHHHHH
Confidence 899999999999999999999999999986543333221 1 269999999875432 2221 12111100
Q ss_pred ------------------------------CCHHHHHHHHHHccc---hhhHhhCCccccccc-----------------
Q 047286 155 ------------------------------ASDEHIRPAVQLANA---EKSIDKLPLGLDTVV----------------- 184 (632)
Q Consensus 155 ------------------------------~~~~~~~~~~~~~~l---~~~i~~l~~g~~~~v----------------- 184 (632)
..+.++..++...+. +..+.+||+|.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDE 179 (530)
T COG0488 100 ELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDEDRPVSSLSGGWRRRVALARALLEEPDLLLLDE 179 (530)
T ss_pred HHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 001223333333332 356889999999888
Q ss_pred ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEE-ecChhHH
Q 047286 185 ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVE-KGTHDEL 243 (632)
Q Consensus 185 ~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~-~g~~~el 243 (632)
+|+.||..+..-+.+.|.++ ++ |+|+||||-..+.. |++|+-+++|++.. .|.++..
T Consensus 180 PTNHLD~~~i~WLe~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~~~ 238 (530)
T COG0488 180 PTNHLDLESIEWLEDYLKRY-PG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYSSY 238 (530)
T ss_pred CCcccCHHHHHHHHHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCHHHH
Confidence 39999999999999999875 34 99999999999977 99999999998864 4554443
No 102
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=99.94 E-value=1.2e-25 Score=251.87 Aligned_cols=228 Identities=16% Similarity=0.113 Sum_probs=177.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|+++++..++.++..+...+.++..+++++.+.|.+.|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (555)
T TIGR01194 160 SAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIA 239 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 34566666666677778888888999999999999999943
Q ss_pred ----------------------CCcccHHHH-----------------HHHHHHHHHHHHHHHHHHHHhcc---CCCC--
Q 047286 44 ----------------------LEDMPLGQT-----------------SLNVNAFAAGQAAACKMFETIER---IPKI-- 79 (632)
Q Consensus 44 ----------------------~~~~~~~~~-----------------~~~~~~~~~~~~a~~ri~~~~~~---~~~~-- 79 (632)
.+.+++|.+ +..++.++++++|++|+.++++. +++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~ 319 (555)
T TIGR01194 240 AENFGQLLFFLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELE 319 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 123344432 34467899999999999999742 1000
Q ss_pred ----------C--C-------------C-C---------CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc---
Q 047286 80 ----------N--P-------------Y-D---------NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP--- 121 (632)
Q Consensus 80 ----------~--~-------------~-~---------~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~--- 121 (632)
. . + + +.+||++++|++++|+||||||||||+++|.+ +++|
T Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g--~~~p~~G 397 (555)
T TIGR01194 320 LSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCG--LYIPQEG 397 (555)
T ss_pred ccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhC--CCCCCCc
Confidence 0 0 0 0 12889999999999999999999999999984 3332
Q ss_pred --------------HHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc---
Q 047286 122 --------------EAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV--- 184 (632)
Q Consensus 122 --------------~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v--- 184 (632)
..+|+.++||+|++.+|.+++.+| . .++.+++++.++++.+++++++..+|+|++|..
T Consensus 398 ~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n--~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~~~LS 472 (555)
T TIGR01194 398 EILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPD--E---GEHASLDNAQQYLQRLEIADKVKIEDGGFSTTTALS 472 (555)
T ss_pred EEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcc--c---ccchhHHHHHHHHHHcCCchhhcccccccCCcccCC
Confidence 346788999999999999998874 2 234578889999999999999988888776533
Q ss_pred ------------------------ccCCCCHHHHHHHHHHHH-HH-hCCceEEEEecCchHHhhcCeEEEEeCCeEEEe
Q 047286 185 ------------------------ATNAVDAQSERIVQAAMV-KL-VTNQTVVIVANCLITIRNADCIIMVSKGKIVEK 237 (632)
Q Consensus 185 ------------------------~ts~LD~~~~~~i~~~l~-~~-~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~ 237 (632)
+|++||+++++.+.+.+. .+ .+++|+|+|||+++.++.||+|++|++|++++.
T Consensus 473 gGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 473 TGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 399999999999988764 44 358999999999999999999999999999875
No 103
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=99.94 E-value=1.1e-25 Score=252.18 Aligned_cols=229 Identities=19% Similarity=0.180 Sum_probs=176.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------------------
Q 047286 3 ACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP--------------------------------------- 43 (632)
Q Consensus 3 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------------------------------------- 43 (632)
+++|+++++..++.++.++..++.++..++.++.+.|.+.|
T Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (547)
T PRK10522 155 IWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLS 234 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHH
Confidence 45667677777888888888888899999999988888843
Q ss_pred ----------------------C--Ccc---------------cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC----
Q 047286 44 ----------------------L--EDM---------------PLGQTSLNVNAFAAGQAAACKMFETIERIPKIN---- 80 (632)
Q Consensus 44 ----------------------~--~~~---------------~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~---- 80 (632)
. +.. |+.++...+..++.++.+++|+.++++.+++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~~~ 314 (547)
T PRK10522 235 AVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFPRP 314 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 0 000 111223345678999999999999875332110
Q ss_pred ---C-------------C-C-----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------CCcHH
Q 047286 81 ---P-------------Y-D-----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------YAPEA 123 (632)
Q Consensus 81 ---~-------------~-~-----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~~~~~ 123 (632)
+ + + +.+||++++|++++|+||||||||||+++|+|+.. .++..
T Consensus 315 ~~~~~~~~i~~~~v~f~y~~~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~ 394 (547)
T PRK10522 315 QAFPDWQTLELRNVTFAYQDNGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPED 394 (547)
T ss_pred cccCcCceEEEEEEEEEeCCCCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHH
Confidence 0 0 0 02899999999999999999999999999985421 12234
Q ss_pred hhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchhhH---------hhCCcccccccc---------
Q 047286 124 EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEKSI---------DKLPLGLDTVVA--------- 185 (632)
Q Consensus 124 ~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i---------~~l~~g~~~~v~--------- 185 (632)
+|++++||+|++.+|.+++.+| + ...+++++.++++.+++.+++ ..||+|++++++
T Consensus 395 ~~~~i~~v~q~~~lf~~ti~~n-----~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~LSgGq~qRl~lARal~~~~ 468 (547)
T PRK10522 395 YRKLFSAVFTDFHLFDQLLGPE-----G-KPANPALVEKWLERLKMAHKLELEDGRISNLKLSKGQKKRLALLLALAEER 468 (547)
T ss_pred HhhheEEEecChhHHHHhhccc-----c-CchHHHHHHHHHHHcCCchhhhccccCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 7889999999999999998773 1 235677888888888876654 268888888873
Q ss_pred --------cCCCCHHHHHHHHHHHHHHh--CCceEEEEecCchHHhhcCeEEEEeCCeEEEe
Q 047286 186 --------TNAVDAQSERIVQAAMVKLV--TNQTVVIVANCLITIRNADCIIMVSKGKIVEK 237 (632)
Q Consensus 186 --------ts~LD~~~~~~i~~~l~~~~--~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~ 237 (632)
|++||+++++.+.+.+.+.. +++|+|+|||+++.++.||+|++|++|++++.
T Consensus 469 ~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 469 DILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999987653 47999999999999999999999999999976
No 104
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.93 E-value=1e-25 Score=213.74 Aligned_cols=169 Identities=22% Similarity=0.357 Sum_probs=134.4
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC------------------cHHhhcceEEEcccCcccccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA------------------PEAEQEKIGLVSKEPIFLFCDFNEGQY 147 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~------------------~~~~r~~i~~v~Q~~~~~~~~~~~~~~ 147 (632)
++|+|++||+++|+||||||||||+|+|.|+...+ ..++|+++|+++|...+| .+++..+|
T Consensus 27 v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALF-ssltV~eN 105 (263)
T COG1127 27 VDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALF-SSLTVFEN 105 (263)
T ss_pred ceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHhheeEEeeccccc-cccchhHh
Confidence 99999999999999999999999999998653322 113688999999998765 45666668
Q ss_pred cccCCC---CCCHHHHHH----HHHHccchh-----hHhhCCcccccccc-----------------cCCCCHHHHHHHH
Q 047286 148 IPYGKQ---NASDEHIRP----AVQLANAEK-----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQ 198 (632)
Q Consensus 148 i~~~~~---~~~~~~~~~----~~~~~~l~~-----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~ 198 (632)
+.|... ..+++.+++ -++.+++.. +..+|++|+..+++ |+||||.+...+.
T Consensus 106 Vafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~ 185 (263)
T COG1127 106 VAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVID 185 (263)
T ss_pred hheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHH
Confidence 887532 234444444 345666543 45678899988874 9999999999999
Q ss_pred HHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 199 AAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 199 ~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
++|+++++ +.|+++||||+..+.. |||++++.+|+|+.+|+++|+.+.++...+++.
T Consensus 186 ~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~P~v~qf~ 245 (263)
T COG1127 186 ELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDDPWVRQFF 245 (263)
T ss_pred HHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCCHHHHHHh
Confidence 99999865 7899999999988865 999999999999999999999887544444443
No 105
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=99.93 E-value=1.4e-25 Score=220.31 Aligned_cols=161 Identities=26% Similarity=0.399 Sum_probs=128.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------CCcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------YAPEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+|+|.++.. +.+.++.++++||||++.. ...++..+.+.
T Consensus 20 ~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~-~~~~tV~d~V~ 98 (258)
T COG1120 20 DLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYVPQSPSA-PFGLTVYELVL 98 (258)
T ss_pred cceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEeccCCCC-CCCcEEeehHh
Confidence 3999999999999999999999999999986432 2234467889999999742 33333333555
Q ss_pred cCCC----------CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 150 YGKQ----------NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 150 ~~~~----------~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
+|+. ..+.+.+.++++.+++.+ .+.+||+|.++++ +|++||...+.+++
T Consensus 99 ~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl 178 (258)
T COG1120 99 LGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVL 178 (258)
T ss_pred hcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHH
Confidence 5532 122345778888888654 4778999998887 39999999999999
Q ss_pred HHHHHHhC--CceEEEEecCchHH-hhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 199 AAMVKLVT--NQTVVIVANCLITI-RNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 199 ~~l~~~~~--~~tviiitH~~~~~-~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.++++.+ +.|+|++.||++.+ ++||++++|++|+++.+|+++|++..
T Consensus 179 ~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 179 ELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred HHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 99999963 68999999999766 56999999999999999999998753
No 106
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=99.92 E-value=2.1e-25 Score=228.64 Aligned_cols=167 Identities=23% Similarity=0.356 Sum_probs=136.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCcccccccccccccccC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLFCDFNEGQYIPYG 151 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~ 151 (632)
++||+|++||+++++|||||||||||++|.|+...+. ...++.||+|+|+..+| +.++..+|+.||
T Consensus 23 ~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALF-PHltV~~NVafG 101 (352)
T COG3842 23 DISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMVFQSYALF-PHMTVEENVAFG 101 (352)
T ss_pred cceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccceeecCcccC-CCCcHHHHhhhh
Confidence 3999999999999999999999999999996643221 12478899999998765 466666699998
Q ss_pred CC-C--CC----HHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHH
Q 047286 152 KQ-N--AS----DEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 152 ~~-~--~~----~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~ 203 (632)
.+ . .. .+++.++++.+++.++ ..+|++|++++|+ .|+||.+-+.+++..+++
T Consensus 102 Lk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~ 181 (352)
T COG3842 102 LKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKE 181 (352)
T ss_pred hhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHH
Confidence 65 1 12 2467888888887654 5678889999884 799999999999999988
Q ss_pred HhC--CceEEEEecCchHH-hhcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 204 LVT--NQTVVIVANCLITI-RNADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~-~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
+.+ |.|.|+||||.+++ ..+|||++|++|+|...|+++|+...|.+.|.
T Consensus 182 lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~~fV 233 (352)
T COG3842 182 LQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPATRFV 233 (352)
T ss_pred HHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcchHHH
Confidence 753 78999999998765 56999999999999999999999988766553
No 107
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.92 E-value=1.5e-24 Score=220.27 Aligned_cols=169 Identities=16% Similarity=0.300 Sum_probs=140.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC--------------CCcHHhhcceEEEcccCccccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF--------------YAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--------------~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~ 150 (632)
.+||+|++||+++|+||||||||||+++|.|+.. ++...+|+.++|+||++.+|..++.+ |+..
T Consensus 22 ~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~~tv~~--nl~~ 99 (275)
T cd03289 22 NISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFSGTFRK--NLDP 99 (275)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcCCCcEEEECCEEhhhCCHHHHhhhEEEECCCcccchhhHHH--Hhhh
Confidence 4999999999999999999999999999986532 11234577899999999999887776 5642
Q ss_pred CCCCCCHHHHHHHHHHccchhhHhhCCccccccc--------------------------------ccCCCCHHHHHHHH
Q 047286 151 GKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV--------------------------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v--------------------------------~ts~LD~~~~~~i~ 198 (632)
.. ..+++++.++++.+++.+.+..+|.++++.+ +|++||+.+++.+.
T Consensus 100 ~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~ 178 (275)
T cd03289 100 YG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIR 178 (275)
T ss_pred cc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHH
Confidence 21 2456788899999999988888777655543 28999999999999
Q ss_pred HHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHHH
Q 047286 199 AAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVRL 257 (632)
Q Consensus 199 ~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~ 257 (632)
+.|++..+++|+|+|||+++.+..||||++|++|++++.|+++++... ...|.++...
T Consensus 179 ~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~ 236 (275)
T cd03289 179 KTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISP 236 (275)
T ss_pred HHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhh
Confidence 999988778999999999999888999999999999999999999885 4556666544
No 108
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.92 E-value=4.5e-25 Score=224.02 Aligned_cols=133 Identities=20% Similarity=0.169 Sum_probs=111.3
Q ss_pred CcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh-----------h------------------------------
Q 047286 496 STVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ-----------V------------------------------ 534 (632)
Q Consensus 496 ~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~-----------~------------------------------ 534 (632)
.++.-+|.-++++|||||||||||||+++|+|+++++. +
T Consensus 21 ~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~~tv~~nl~~~ 100 (275)
T cd03289 21 ENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFSGTFRKNLDPY 100 (275)
T ss_pred eceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcCCCcEEEECCEEhhhCCHHHHhhhEEEECCCcccchhhHHHHhhhc
Confidence 34444666677999999999999999999999976311 0
Q ss_pred --------cHHHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 535 --------IYSWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 535 --------~~~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
+......++.+++..+|++|||.++|+|.+||||||||+|||||+++
T Consensus 101 ~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~ 180 (275)
T cd03289 101 GKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKT 180 (275)
T ss_pred cCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHH
Confidence 00000114567899999999999999999999999999999999665
Q ss_pred ----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhh
Q 047286 582 ----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 582 ----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~ 629 (632)
+++||++++++.||+|+||++|+|+|.|++++|+++ ++.|++++...
T Consensus 181 l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 237 (275)
T cd03289 181 LKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPS 237 (275)
T ss_pred HHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhc
Confidence 788999999999999999999999999999999997 78889888653
No 109
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.5e-23 Score=222.33 Aligned_cols=154 Identities=18% Similarity=0.292 Sum_probs=119.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------CCcHH-hhcceEEEcccCccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------YAPEA-EQEKIGLVSKEPIFLFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~~~~~-~r~~i~~v~Q~~~~~~~~~~~~~~i 148 (632)
.+||++.+||++||+|.||||||||+|+|+|.-. ..|.+ ....|+.|+||..+++ .++..+|+
T Consensus 26 ~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p-~LsVaeNi 104 (500)
T COG1129 26 GVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGIATVHQELSLVP-NLSVAENI 104 (500)
T ss_pred cceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCcEEEeechhccC-CccHHHHh
Confidence 3999999999999999999999999999985421 12222 3457999999997653 44545577
Q ss_pred ccCCCCC------CH----HHHHHHHHHcc----chhhHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 149 PYGKQNA------SD----EHIRPAVQLAN----AEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 149 ~~~~~~~------~~----~~~~~~~~~~~----l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
-+++... +. ++.+++++..+ .+..+.+||.+.++.| +|++|+....+.+
T Consensus 105 fLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~L 184 (500)
T COG1129 105 FLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVGDLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERL 184 (500)
T ss_pred hcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHH
Confidence 6665321 22 33445555444 4556778888888777 3999999999999
Q ss_pred HHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecC
Q 047286 198 QAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGT 239 (632)
Q Consensus 198 ~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~ 239 (632)
.+.+++++ +|.++|+|||+++++.. ||||.||.+|+.+...+
T Consensus 185 f~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 185 FDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred HHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 99999997 58899999999998865 99999999999988765
No 110
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.92 E-value=1.1e-24 Score=207.75 Aligned_cols=168 Identities=23% Similarity=0.380 Sum_probs=131.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC------------c----HHhhcceEEEcccCccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA------------P----EAEQEKIGLVSKEPIFLFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~------------~----~~~r~~i~~v~Q~~~~~~~~~~~~~~i 148 (632)
.+||+|.+||+++|+|+||||||||.++|.|+.... + ...++.+.+|||+|. +++....++
T Consensus 25 ~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~---~SLnP~~tv 101 (252)
T COG1124 25 NVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPY---SSLNPRRTV 101 (252)
T ss_pred ceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhccceeEEecCCc---cccCcchhH
Confidence 499999999999999999999999999998653211 1 124678999999995 222221111
Q ss_pred ----c----cCCCCCCHHHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCCHHHHHHHH
Q 047286 149 ----P----YGKQNASDEHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQ 198 (632)
Q Consensus 149 ----~----~~~~~~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~ 198 (632)
. ........+++.++++.+++. ++..+|++|..++|+ ||+||+..+.+++
T Consensus 102 ~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~Il 181 (252)
T COG1124 102 GRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQIL 181 (252)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHH
Confidence 1 111122345688899988864 455678899998884 9999999999999
Q ss_pred HHHHHHhCC--ceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 199 AAMVKLVTN--QTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 199 ~~l~~~~~~--~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
+.+.+++++ -|.++||||+..+.+ ||||+||++|+++|.++.+++...+...|.+..
T Consensus 182 nlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~~~h~ytr~L 241 (252)
T COG1124 182 NLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSHPSHPYTREL 241 (252)
T ss_pred HHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcCCccHHHHHH
Confidence 999999764 599999999999987 999999999999999999999887777776543
No 111
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=99.92 E-value=1.8e-24 Score=195.88 Aligned_cols=160 Identities=26% Similarity=0.406 Sum_probs=131.6
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH-------------HhhcceEEEcccCcccccccccccccccCC
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE-------------AEQEKIGLVSKEPIFLFCDFNEGQYIPYGK 152 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~-------------~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~ 152 (632)
++++|+.||++||+||||||||||+|+|.|+...... ...+-+++++||..+| ..++...|+.+|.
T Consensus 18 fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLF-aHLtV~qNigLGl 96 (231)
T COG3840 18 FDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQENNLF-AHLTVAQNIGLGL 96 (231)
T ss_pred EEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhhccccc-hhhhhhhhhcccC
Confidence 8889999999999999999999999999966432211 1356799999999866 4555556888875
Q ss_pred CC------CCHHHHHHHHHHccchhhHhhCC----cccccccc-----------------cCCCCHHHHHHHHHHHHHHh
Q 047286 153 QN------ASDEHIRPAVQLANAEKSIDKLP----LGLDTVVA-----------------TNAVDAQSERIVQAAMVKLV 205 (632)
Q Consensus 153 ~~------~~~~~~~~~~~~~~l~~~i~~l~----~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~ 205 (632)
.. ...++++.++..+++..+.+++| +|.+++++ +|+|||.-+.++...+.++.
T Consensus 97 ~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~ 176 (231)
T COG3840 97 SPGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLC 176 (231)
T ss_pred CcccccCHHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHH
Confidence 31 24567888889999988877666 57777774 89999999999999999986
Q ss_pred C--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 206 T--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 206 ~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
. +.|++||||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 177 ~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 177 DERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 3 6799999999998876 999999999999999999998764
No 112
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=99.92 E-value=1.4e-24 Score=209.21 Aligned_cols=150 Identities=25% Similarity=0.331 Sum_probs=118.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc------------------HH-hhcceEEEcccCcccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP------------------EA-EQEKIGLVSKEPIFLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~------------------~~-~r~~i~~v~Q~~~~~~~~~~~~ 145 (632)
.+||+|++||+++|+|||||||||||++|.++...+. .. .+++||||+|+..++ ..++..
T Consensus 23 ~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl-~~ltv~ 101 (226)
T COG1136 23 DVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL-PDLTVL 101 (226)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC-CCCCHH
Confidence 4999999999999999999999999999976532211 01 356799999998754 345555
Q ss_pred ccccc----CCCC--CCHHHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCCHHHHHHH
Q 047286 146 QYIPY----GKQN--ASDEHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVDAQSERIV 197 (632)
Q Consensus 146 ~~i~~----~~~~--~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i 197 (632)
+|+.+ .... ...++..+.++..++. ++..+||+|.+++|+ |++||.++.+.+
T Consensus 102 ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V 181 (226)
T COG1136 102 ENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEV 181 (226)
T ss_pred HHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHH
Confidence 57763 2111 1245566777777776 446688999999984 999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEE
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIV 235 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~ 235 (632)
++.++++.+ ++|+|+||||...+..|||++.|++|++.
T Consensus 182 ~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 182 LELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999853 78999999999999999999999999954
No 113
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.4e-24 Score=221.45 Aligned_cols=167 Identities=23% Similarity=0.350 Sum_probs=136.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCcccccccccccccccC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLFCDFNEGQYIPYG 151 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~ 151 (632)
.+|++|++||+++|+|||||||||||++|.|+...+. ...++.|++|||+..+| ..++..+|+.|+
T Consensus 21 ~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALy-PhmtV~~Niaf~ 99 (338)
T COG3839 21 DVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVFQNYALY-PHMTVYENIAFG 99 (338)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEeCCcccc-CCCcHHHHhhhh
Confidence 3999999999999999999999999999997643211 12468899999998765 455555689988
Q ss_pred CCC------CCHHHHHHHHHHccchhhHh----hCCcccccccc-----------------cCCCCHHHHHHHHHHHHHH
Q 047286 152 KQN------ASDEHIRPAVQLANAEKSID----KLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKL 204 (632)
Q Consensus 152 ~~~------~~~~~~~~~~~~~~l~~~i~----~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~ 204 (632)
.+. ..+++++++++..++++.++ +||+|++++|+ .|+||++.+..+...|+++
T Consensus 100 Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~l 179 (338)
T COG3839 100 LKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKL 179 (338)
T ss_pred hhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHH
Confidence 543 23567788888888776654 56788888884 7999999999999999998
Q ss_pred hC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 205 VT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 205 ~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
.+ +.|+|+||||..++. .+|||++|++|+|.+.|++.|+...|.+.|.
T Consensus 180 h~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~fV 230 (338)
T COG3839 180 HERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANLFV 230 (338)
T ss_pred HHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccchhh
Confidence 64 679999999987765 5999999999999999999999988766553
No 114
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=99.91 E-value=8e-24 Score=219.77 Aligned_cols=151 Identities=21% Similarity=0.361 Sum_probs=123.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH------------------HhhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE------------------AEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~------------------~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
.+||+|++||+.||+|+||+|||||+++|.|+ |.|+ ..+..||+|.|.+.+ ..+++..+
T Consensus 22 ~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~--~~P~~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~L-v~~lTV~E 98 (501)
T COG3845 22 DVSLSVKKGEIHALLGENGAGKSTLMKILFGL--YQPDSGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFML-VPTLTVAE 98 (501)
T ss_pred ceeeeecCCcEEEEeccCCCCHHHHHHHHhCc--ccCCcceEEECCEEeccCCHHHHHHcCCcEEeecccc-ccccchhh
Confidence 49999999999999999999999999999844 3332 257789999999865 45666666
Q ss_pred ccccCCCCC-----C----HHHHHHHHHHccc----hhhHhhCCccccccc-----------------ccCCCCHHHHHH
Q 047286 147 YIPYGKQNA-----S----DEHIRPAVQLANA----EKSIDKLPLGLDTVV-----------------ATNAVDAQSERI 196 (632)
Q Consensus 147 ~i~~~~~~~-----~----~~~~~~~~~~~~l----~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~ 196 (632)
|+.++.... + .+++.+..+..++ +..+..||-|.+++| +|+-|-|...++
T Consensus 99 NiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~dLsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~ 178 (501)
T COG3845 99 NIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVADLSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADE 178 (501)
T ss_pred hhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceeecCCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHH
Confidence 888876421 2 3456666666654 566889999999888 499999999999
Q ss_pred HHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 197 VQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 197 i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
+++.+++++ +|+|||+|||.+.++.. |||+.||.+|+++..-
T Consensus 179 lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~ 222 (501)
T COG3845 179 LFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTV 222 (501)
T ss_pred HHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeee
Confidence 999999986 58999999999998876 9999999999986543
No 115
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.91 E-value=2.5e-24 Score=211.48 Aligned_cols=160 Identities=27% Similarity=0.424 Sum_probs=132.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----------------CcHHhhcceEEEcccC--ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----------------APEAEQEKIGLVSKEP--IFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----------------~~~~~r~~i~~v~Q~~--~~~~~~~~~~~ 146 (632)
.+|+++++|+.++|+|+||||||||++++.|+... ...++|+++|||+|+| .+|..++.+
T Consensus 22 ~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~-- 99 (235)
T COG1122 22 DVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTVED-- 99 (235)
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcHHH--
Confidence 38999999999999999999999999999865321 1334688999999999 456666655
Q ss_pred ccccCCCC--CC----HHHHHHHHHHccch----hhHhhCCcccccccc-----------------cCCCCHHHHHHHHH
Q 047286 147 YIPYGKQN--AS----DEHIRPAVQLANAE----KSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQA 199 (632)
Q Consensus 147 ~i~~~~~~--~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~ 199 (632)
.+.|+..+ .+ ++++.++++.+++. +....||+|..++++ |++||+..++.+++
T Consensus 100 evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~ 179 (235)
T COG1122 100 EVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLE 179 (235)
T ss_pred HHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 47777543 22 34567788888875 556788999999884 99999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 200 AMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.++++.+ ++|+|++||+++.+.. ||++++|++|+++.+|++.++.++
T Consensus 180 ~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 180 LLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999964 4799999999999876 999999999999999999998764
No 116
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=99.91 E-value=1.8e-24 Score=211.67 Aligned_cols=166 Identities=23% Similarity=0.352 Sum_probs=134.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------H---HhhcceEEEcccCccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------E---AEQEKIGLVSKEPIFLFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~---~~r~~i~~v~Q~~~~~~~~~~~~~~i 148 (632)
+++++|+.||.+|+.|||||||||||++|.|+...+. . .-.++||+|+|+..+| ..++..+||
T Consensus 20 di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF-~HmtVa~NI 98 (345)
T COG1118 20 DISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF-PHMTVADNI 98 (345)
T ss_pred cceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeEEEechhhc-ccchHHhhh
Confidence 4999999999999999999999999999987643221 1 1246799999998765 455556699
Q ss_pred ccCCCC--------CCHHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHHHHH
Q 047286 149 PYGKQN--------ASDEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERIVQA 199 (632)
Q Consensus 149 ~~~~~~--------~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~ 199 (632)
.||.+. ..+.++.+.++.++++.. ..+|++|+.++|+ +++||++.++++..
T Consensus 99 AFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~ 178 (345)
T COG1118 99 AFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRR 178 (345)
T ss_pred hhcccccccCCChhhHHHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHH
Confidence 998621 234567777888877654 5567788888884 78999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 200 AMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
-|+++.. +.|+++||||.+++. .||||++|++|+|...|+++|+...|+..|
T Consensus 179 wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s~f 233 (345)
T COG1118 179 WLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPASRF 233 (345)
T ss_pred HHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCccc
Confidence 9999854 789999999998775 599999999999999999999988776654
No 117
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.91 E-value=1.3e-24 Score=212.75 Aligned_cols=166 Identities=26% Similarity=0.399 Sum_probs=135.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH---------------------hhcceEEEcccCcccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA---------------------EQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~---------------------~r~~i~~v~Q~~~~~~~~~~ 143 (632)
++||+|+.||++.|.|-||||||||++++. +..+|.. .|+++++|||+..+++ ..+
T Consensus 46 ~~sl~v~~GeIfViMGLSGSGKSTLvR~~N--rLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP-hrt 122 (386)
T COG4175 46 DASLDVEEGEIFVIMGLSGSGKSTLVRLLN--RLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP-HRT 122 (386)
T ss_pred cceeeecCCeEEEEEecCCCCHHHHHHHHh--ccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc-chh
Confidence 499999999999999999999999999998 4443321 3568999999987654 334
Q ss_pred cccccccCCCC------CCHHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHH
Q 047286 144 EGQYIPYGKQN------ASDEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERI 196 (632)
Q Consensus 144 ~~~~i~~~~~~------~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~ 196 (632)
..+|..||.+- ...++..++++.++++.+ ..+|++|++++|+ +|+|||--+.+
T Consensus 123 Vl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~ 202 (386)
T COG4175 123 VLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTE 202 (386)
T ss_pred HhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHH
Confidence 44488887531 224556778888988755 5667789999983 89999999999
Q ss_pred HHHHHHHHhC--CceEEEEecCchHH-hhcCeEEEEeCCeEEEecChhHHhcCCCcHHHH
Q 047286 197 VQAAMVKLVT--NQTVVIVANCLITI-RNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQ 253 (632)
Q Consensus 197 i~~~l~~~~~--~~tviiitH~~~~~-~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 253 (632)
+++.|.++.+ ++|+|+||||++++ +..|||.+|++|+|++.||++|+..+|.+.|-.
T Consensus 203 mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~ 262 (386)
T COG4175 203 MQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEILLNPANDYVR 262 (386)
T ss_pred HHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHHHcCccHHHHH
Confidence 9999988853 79999999999776 559999999999999999999999998888764
No 118
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=99.91 E-value=3.2e-24 Score=209.63 Aligned_cols=159 Identities=20% Similarity=0.330 Sum_probs=124.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH----------Hh--hcceEEEcccC---cccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE----------AE--QEKIGLVSKEP---IFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~----------~~--r~~i~~v~Q~~---~~~~~~~~~~~~i~ 149 (632)
.+||+|++|++++|+||||||||||+|+|+|+...... .. +.+||||||.. +-|+.++.+ .+.
T Consensus 22 ~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV~d--~V~ 99 (254)
T COG1121 22 DISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITVKD--VVL 99 (254)
T ss_pred ccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcCcccccCCCCCcCHHH--HHH
Confidence 39999999999999999999999999999975322111 11 25799999965 234444443 344
Q ss_pred cCCC----------CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 150 YGKQ----------NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 150 ~~~~----------~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
++.. ..+.++++++++.+++.+ .+.+||+|+.+++ +++|+|+.++..+.
T Consensus 100 ~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~ 179 (254)
T COG1121 100 LGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIY 179 (254)
T ss_pred ccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHH
Confidence 4321 123578899999998764 4778999999888 38999999999999
Q ss_pred HHHHHHhC-CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 199 AAMVKLVT-NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 199 ~~l~~~~~-~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.|+++++ |+||++||||++.+. ++|+|++|++ +++..|+++++.+.
T Consensus 180 ~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~~~~ 228 (254)
T COG1121 180 DLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEVLTE 228 (254)
T ss_pred HHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhccCH
Confidence 99999964 899999999998875 5999999954 78899999998754
No 119
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.91 E-value=3e-24 Score=206.81 Aligned_cols=150 Identities=25% Similarity=0.319 Sum_probs=118.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH----------HhhcceEEEcccCcccccccccccccccCCCC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE----------AEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQN 154 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~----------~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~ 154 (632)
++||+|++||+++|+||||||||||+|+|.|+..+... .....++||+|++.+|+ ..+..+|+.++...
T Consensus 21 ~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~~~LlP-W~Tv~~NV~l~l~~ 99 (248)
T COG1116 21 DINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQEDALLP-WLTVLDNVALGLEL 99 (248)
T ss_pred cceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEeccCcccc-hhhHHhhheehhhc
Confidence 39999999999999999999999999999976433211 23457999999998654 44444578776432
Q ss_pred C------CHHHHHHHHHHccchhhH----hhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHh--
Q 047286 155 A------SDEHIRPAVQLANAEKSI----DKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLV-- 205 (632)
Q Consensus 155 ~------~~~~~~~~~~~~~l~~~i----~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~-- 205 (632)
. ..+++.+.++.+++.++- .+||+|++++++ ++|||+.|+..+++.+.++.
T Consensus 100 ~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~ 179 (248)
T COG1116 100 RGKSKAEARERAKELLELVGLAGFEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEE 179 (248)
T ss_pred cccchHhHHHHHHHHHHHcCCcchhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHh
Confidence 1 234678888999886654 566689999884 89999999999999999885
Q ss_pred CCceEEEEecCchHHhh-cCeEEEEeC--CeEE
Q 047286 206 TNQTVVIVANCLITIRN-ADCIIMVSK--GKIV 235 (632)
Q Consensus 206 ~~~tviiitH~~~~~~~-aD~i~vl~~--G~i~ 235 (632)
.++|+++||||.+++-. +|||++|.+ |+|.
T Consensus 180 ~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 180 TRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred hCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 36899999999988755 999999999 5554
No 120
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=99.91 E-value=3.7e-24 Score=219.31 Aligned_cols=160 Identities=24% Similarity=0.435 Sum_probs=133.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--------------CcHHhhcceEEEcccCccccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~ 150 (632)
.+||+|++|+++|++||||||||||+|+|+|+... ++.+.++++||+||+|. ++..++..+|+.+
T Consensus 23 ~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~-~~~~lT~~e~l~~ 101 (293)
T COG1131 23 GVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYVPQEPS-LYPELTVRENLEF 101 (293)
T ss_pred ceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEEccCCC-CCccccHHHHHHH
Confidence 39999999999999999999999999999865321 12356789999999997 6667776667655
Q ss_pred CC-----C-CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHH
Q 047286 151 GK-----Q-NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~-----~-~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~ 203 (632)
.. . ....++++++++..++.+ .+..||.|+++++ +|+||||.++..+++.|++
T Consensus 102 ~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~ 181 (293)
T COG1131 102 FARLYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRE 181 (293)
T ss_pred HHHHhCCChhHHHHHHHHHHHHcCCchhhCcchhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHH
Confidence 21 1 123567889999988774 4788999999888 3999999999999999999
Q ss_pred HhC-C-ceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 204 LVT-N-QTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 204 ~~~-~-~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+.+ + .||+++||.++.+.. ||+|++|++|+++.+|+.+++..
T Consensus 182 l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 182 LAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred HHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 975 4 699999999999977 99999999999999999998754
No 121
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=99.91 E-value=6.8e-24 Score=222.53 Aligned_cols=166 Identities=25% Similarity=0.355 Sum_probs=132.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHh----hcceEEEcccCccccc-cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAE----QEKIGLVSKEPIFLFC-DFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~----r~~i~~v~Q~~~~~~~-~~~~ 144 (632)
.+||+|++||+++|+||||||||||+++|+|+... ++..+ ++.++||+|++.+|+. ++.+
T Consensus 11 ~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~TV~e 90 (363)
T TIGR01186 11 DADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHMTILQ 90 (363)
T ss_pred eeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCCCHHH
Confidence 39999999999999999999999999999865321 12223 6789999999988763 6665
Q ss_pred ccccccCCC--CC----CHHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHHH
Q 047286 145 GQYIPYGKQ--NA----SDEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~~--~~----~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~i 197 (632)
|+.++.. .. ..+++.++++.++++.+ ..+||+|++++++ |++||+.+++.+
T Consensus 91 --Ni~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l 168 (363)
T TIGR01186 91 --NTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSM 168 (363)
T ss_pred --HHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHH
Confidence 6665421 11 23456778888887654 5567889988883 999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
++.+.++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++...+...|.
T Consensus 169 ~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 169 QDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 999998853 789999999998764 5999999999999999999999877655554
No 122
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=99.91 E-value=5.7e-24 Score=221.90 Aligned_cols=165 Identities=21% Similarity=0.380 Sum_probs=131.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---HhhcceEEEcccCcccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---AEQEKIGLVSKEPIFLF-CDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~~r~~i~~v~Q~~~~~~-~~~~~~ 145 (632)
.+||+|++||+++|+||||||||||+++|.|+...+ +. ..|++|+|++|++.++. .++.+
T Consensus 23 ~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~e- 101 (343)
T TIGR02314 23 NVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRTVFG- 101 (343)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCcHHH-
Confidence 399999999999999999999999999998653211 11 23678999999987764 35544
Q ss_pred cccccCCC--CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHH
Q 047286 146 QYIPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~ 198 (632)
|+.++.. ..+ .+++.++++.+++.+ ...+||+|++++++ |++||+.+++.++
T Consensus 102 -ni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~ 180 (343)
T TIGR02314 102 -NVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSIL 180 (343)
T ss_pred -HHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHH
Confidence 6665321 112 345677888888754 45678889988883 9999999999999
Q ss_pred HHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 199 AAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 199 ~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.|+++.+ +.|+|++||+++.+.. ||+|++|++|++++.|+++++...+...+
T Consensus 181 ~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~~~ 236 (343)
T TIGR02314 181 ELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKTPL 236 (343)
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCcHH
Confidence 99999854 7899999999999865 99999999999999999999987665444
No 123
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.91 E-value=7.6e-24 Score=220.58 Aligned_cols=162 Identities=19% Similarity=0.342 Sum_probs=131.8
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------C---------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------A---------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------~---------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||+|++||+++|+||||||||||+++|.|.... . ...+|+.++|+||+|++|..++.
T Consensus 101 is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~ 180 (329)
T PRK14257 101 LNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIF 180 (329)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHH
Confidence 9999999999999999999999999999865321 0 02357789999999999988877
Q ss_pred cccccccCCC--CCCHH-----HHHHHHHHccc--------hhhHhhCCccccccc-----------------ccCCCCH
Q 047286 144 EGQYIPYGKQ--NASDE-----HIRPAVQLANA--------EKSIDKLPLGLDTVV-----------------ATNAVDA 191 (632)
Q Consensus 144 ~~~~i~~~~~--~~~~~-----~~~~~~~~~~l--------~~~i~~l~~g~~~~v-----------------~ts~LD~ 191 (632)
+ |+.++.. ..+++ .+.++++.+++ ++....||+|.++++ +|++||+
T Consensus 181 e--Ni~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~ 258 (329)
T PRK14257 181 D--NVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDP 258 (329)
T ss_pred H--HHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCH
Confidence 6 6765431 12222 24566777765 244566889988877 3999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
.+.+.+.++|+++.+++|+|++||+++.+.. ||||++|++|+|++.|+++++...+..
T Consensus 259 ~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~~ 317 (329)
T PRK14257 259 IATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPKN 317 (329)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCc
Confidence 9999999999998888999999999999876 999999999999999999999876543
No 124
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=99.90 E-value=2.6e-23 Score=236.46 Aligned_cols=224 Identities=15% Similarity=0.186 Sum_probs=175.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 047286 2 AACLPAIVIAGGITATVVAKLSCRGQIAYAEAEMLLSTQLEP-------------------------------------- 43 (632)
Q Consensus 2 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------------------------------------- 43 (632)
++.+|+.+++..++.+.+.+..++.++..++.++.++|.+.|
T Consensus 246 l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~ 325 (659)
T TIGR00954 246 FAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSY 325 (659)
T ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455788899999999999999999999999999999999943
Q ss_pred ---------------------------C----CcccHHHH---------------------HHHHHHHHHHHHHHHHHHH
Q 047286 44 ---------------------------L----EDMPLGQT---------------------SLNVNAFAAGQAAACKMFE 71 (632)
Q Consensus 44 ---------------------------~----~~~~~~~~---------------------~~~~~~~~~~~~a~~ri~~ 71 (632)
. +.+++|.+ +..+..++++.++++|+++
T Consensus 326 ~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ 405 (659)
T TIGR00954 326 GFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDT 405 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 22333331 2235678999999999999
Q ss_pred HhccCCCC--------------------------------C-C------------C--C----CcEEEEeeCCCEEEEEc
Q 047286 72 TIERIPKI--------------------------------N-P------------Y--D----NRFLQHVPSGTTVALVG 100 (632)
Q Consensus 72 ~~~~~~~~--------------------------------~-~------------~--~----~~~~~~i~~Ge~~~ivG 100 (632)
+++.+++. . . . . ..+||++++||+++|+|
T Consensus 406 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~isl~i~~Ge~~~IvG 485 (659)
T TIGR00954 406 LLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLSFEVPSGNHLLICG 485 (659)
T ss_pred HHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCCCeeeecceEEECCCCEEEEEC
Confidence 99642110 0 0 0 0 01899999999999999
Q ss_pred CCCchHHHHHHHHHhCCCCCcHH------hhcceEEEcccCcccccccccccccccCC-------CCCCHHHHHHHHHHc
Q 047286 101 QSGSGKSTVINLVESFRFYAPEA------EQEKIGLVSKEPIFLFCDFNEGQYIPYGK-------QNASDEHIRPAVQLA 167 (632)
Q Consensus 101 ~sGsGKSTLl~ll~~~~~~~~~~------~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~-------~~~~~~~~~~~~~~~ 167 (632)
|||||||||+++|+|+ +++.. .+++++||+|+|.++.+++.+ |+.++. +...++++.++++.+
T Consensus 486 ~nGsGKSTLl~lL~Gl--~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~e--ni~~~~~~~~~~~~~~~~~~i~~~l~~~ 561 (659)
T TIGR00954 486 PNGCGKSSLFRILGEL--WPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRD--QIIYPDSSEDMKRRGLSDKDLEQILDNV 561 (659)
T ss_pred CCCCCHHHHHHHHhCC--CCCCCCeEeecCCCcEEEECCCCCCCCcCHHH--HHhcCCChhhhhccCCCHHHHHHHHHHc
Confidence 9999999999999954 33322 256799999999988887777 676653 234567888999999
Q ss_pred cchhhHh-------------hCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCc
Q 047286 168 NAEKSID-------------KLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCL 217 (632)
Q Consensus 168 ~l~~~i~-------------~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~ 217 (632)
++++.++ .||+|+++++ +|++||+.+++.+.+.+++. ++|+|++||++
T Consensus 562 ~l~~~~~~~~g~~~~~~~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~ 639 (659)
T TIGR00954 562 QLTHILEREGGWSAVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRK 639 (659)
T ss_pred CCHHHHhhcCCcccccccccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCch
Confidence 9887664 4667777666 39999999999999998874 88999999999
Q ss_pred hHHhhcCeEEEEeC
Q 047286 218 ITIRNADCIIMVSK 231 (632)
Q Consensus 218 ~~~~~aD~i~vl~~ 231 (632)
+.++.||++++|+.
T Consensus 640 ~~~~~~d~il~l~~ 653 (659)
T TIGR00954 640 SLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHhCCEEEEEeC
Confidence 99999999999973
No 125
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.90 E-value=7.3e-24 Score=200.56 Aligned_cols=159 Identities=21% Similarity=0.249 Sum_probs=125.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC------------------cHHhhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA------------------PEAEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~------------------~~~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
++||+|++||+++|+||||||||||+++|.++.... ...+|+++|+++|++.+... ....+
T Consensus 22 ~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv~r-~sv~~ 100 (258)
T COG3638 22 DVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLVPR-LSVLE 100 (258)
T ss_pred eEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHhceeEeccCCcccc-cHHHH
Confidence 399999999999999999999999999998542111 12368899999999876542 22233
Q ss_pred ccccCCC-----------CCC---HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCH
Q 047286 147 YIPYGKQ-----------NAS---DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDA 191 (632)
Q Consensus 147 ~i~~~~~-----------~~~---~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~ 191 (632)
|+..|+. -.+ .....++++..++.+ ..+.||+|.+++|+ +++|||
T Consensus 101 NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp 180 (258)
T COG3638 101 NVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRASTLSGGQQQRVAIARALVQQPKIILADEPVASLDP 180 (258)
T ss_pred HHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhccCCcchhHHHHHHHHHhcCCCEEecCCcccccCh
Confidence 5544321 122 334556677777654 46789999999984 899999
Q ss_pred HHHHHHHHHHHHHh--CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHh
Q 047286 192 QSERIVQAAMVKLV--TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 192 ~~~~~i~~~l~~~~--~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~ 244 (632)
.+.+.+++.|+++. .|.|+|+.-|+++.++ +||||+-|++|+|+.+|+++|+-
T Consensus 181 ~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 181 ESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 99999999999985 4789999999999886 59999999999999999999863
No 126
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=99.90 E-value=8.8e-23 Score=204.26 Aligned_cols=168 Identities=34% Similarity=0.517 Sum_probs=129.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|+... ++...++.++|++|++.++..++.+ |+.
T Consensus 20 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~--nl~ 97 (237)
T cd03252 20 NISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFNRSIRD--NIA 97 (237)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhccchHHH--Hhh
Confidence 49999999999999999999999999999865321 1123467799999999877666655 666
Q ss_pred cCCCCCCHHHHHHHHHHccchhh---------------HhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 150 YGKQNASDEHIRPAVQLANAEKS---------------IDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~---------------i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
+.......+++.+.++..++.+. +..||+|+.+++ +|++||+.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l 177 (237)
T cd03252 98 LADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAI 177 (237)
T ss_pred ccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHH
Confidence 54333334444444444444333 356677776666 3999999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+++++... .+.|..+.
T Consensus 178 ~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 234 (237)
T cd03252 178 MRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLY 234 (237)
T ss_pred HHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHH
Confidence 9999998778899999999999888999999999999999999998765 45555443
No 127
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=99.90 E-value=2.4e-23 Score=219.02 Aligned_cols=166 Identities=23% Similarity=0.320 Sum_probs=131.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------cHHhhcceEEEcccCcccc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~ 150 (632)
.+||++++||+++|+||||||||||+++|.|+...+ ....++.++||+|++.+|+ .++.+ |+.+
T Consensus 22 ~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~e--Ni~~ 99 (356)
T PRK11650 22 GIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVRE--NMAY 99 (356)
T ss_pred eeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHHH--HHHh
Confidence 399999999999999999999999999998763221 0113578999999998764 35544 7776
Q ss_pred CCC--CCC----HHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ--NAS----DEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~--~~~----~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~ 203 (632)
+.. ..+ .+++.++++.+++.+. ..+||+|++++++ |++||+.+++.+.+.|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~ 179 (356)
T PRK11650 100 GLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQR 179 (356)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 532 112 2456778888887654 5678889988883 999999999999999998
Q ss_pred HhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 204 LVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
+.+ +.|+|++||++..+. .||+|++|++|++++.|+++++.+.+...|.
T Consensus 180 l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (356)
T PRK11650 180 LHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPASTFV 231 (356)
T ss_pred HHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCccHHH
Confidence 854 689999999998775 5999999999999999999999877655443
No 128
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=99.90 E-value=2.1e-23 Score=218.85 Aligned_cols=165 Identities=25% Similarity=0.398 Sum_probs=132.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------cHHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||++++||+++|+||||||||||+++|.|+...+ ....+++++||+|++.+|.. ++.+ |+.+
T Consensus 24 ~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~e--Ni~~ 101 (351)
T PRK11432 24 NLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGE--NVGY 101 (351)
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHH--HHHH
Confidence 399999999999999999999999999998653221 11235789999999987653 5544 7876
Q ss_pred CCC--CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~ 203 (632)
+.. ... .+++.++++..++.+ ....||+|.+++++ +++||+.+++.+.+.|++
T Consensus 102 ~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~ 181 (351)
T PRK11432 102 GLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRE 181 (351)
T ss_pred HHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 532 112 346677888877653 46678889988883 899999999999999999
Q ss_pred HhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 204 LVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.+ +.|+|++||+.+.+. .||+|++|++|++++.|+++++...+...|
T Consensus 182 l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~ 232 (351)
T PRK11432 182 LQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRF 232 (351)
T ss_pred HHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchH
Confidence 854 789999999998875 599999999999999999999988766544
No 129
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.89 E-value=3.3e-23 Score=206.54 Aligned_cols=171 Identities=19% Similarity=0.327 Sum_probs=129.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------------cHH---h-hcceEEEcccCcc-cc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------------PEA---E-QEKIGLVSKEPIF-LF 139 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------------~~~---~-r~~i~~v~Q~~~~-~~ 139 (632)
.+||++++||++||||+|||||||+.+.|+++...+ ..+ + .+.|+++||+|.. ++
T Consensus 23 ~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLn 102 (316)
T COG0444 23 GVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQDPMTSLN 102 (316)
T ss_pred ceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcCchhhcC
Confidence 399999999999999999999999999987643211 011 2 2479999999852 33
Q ss_pred cccccccc----cccCCC----CCCHHHHHHHHHHccchh-------hHhhCCccccccc-----------------ccC
Q 047286 140 CDFNEGQY----IPYGKQ----NASDEHIRPAVQLANAEK-------SIDKLPLGLDTVV-----------------ATN 187 (632)
Q Consensus 140 ~~~~~~~~----i~~~~~----~~~~~~~~~~~~~~~l~~-------~i~~l~~g~~~~v-----------------~ts 187 (632)
...+.... +..... ....++..++++.+++.+ +..+||+|+.++| +|+
T Consensus 103 Pv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTT 182 (316)
T COG0444 103 PVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTT 182 (316)
T ss_pred ChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcc
Confidence 33322111 111111 111345677788887653 2345668888887 399
Q ss_pred CCCHHHHHHHHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 188 AVDAQSERIVQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 188 ~LD~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
|||...+.+|++.|+++.+ +.++|+||||+..+.. ||||+||..|+|+|.|+.++++.++.++|.+..
T Consensus 183 ALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 183 ALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEEGPVEEIFKNPKHPYTRGL 253 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCCHHHHhcCCCChHHHHH
Confidence 9999999999999999964 7899999999998865 999999999999999999999999999998644
No 130
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=99.89 E-value=3.2e-23 Score=217.78 Aligned_cols=165 Identities=22% Similarity=0.335 Sum_probs=132.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------cHHhhcceEEEcccCcccc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~ 150 (632)
.+||++++||+++|+||||||||||+++|.|+...+ ....++.++||+|++.+|+ .++.+ |+.+
T Consensus 22 ~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~e--Ni~~ 99 (353)
T TIGR03265 22 DISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVAD--NIAY 99 (353)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHHH--HHHH
Confidence 389999999999999999999999999999763221 0123678999999998775 35544 7776
Q ss_pred CCCC--C----CHHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHH
Q 047286 151 GKQN--A----SDEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~~--~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~ 203 (632)
+... . ..+++.++++..++.+ ...+||+|++++++ +++||+.+++.+.+.|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~ 179 (353)
T TIGR03265 100 GLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQ 179 (353)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 5321 1 1346777888887654 56678899988883 899999999999999998
Q ss_pred HhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 204 LVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.+ +.|+|++||+.+++. .||+|++|++|++++.|+++++.+.+...+
T Consensus 180 l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 180 LQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred HHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 854 689999999999875 599999999999999999999988766544
No 131
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=99.89 E-value=1.5e-22 Score=204.83 Aligned_cols=168 Identities=24% Similarity=0.419 Sum_probs=130.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++||+++|+|+||||||||+++|+|+... ++...++.++|++|++.+|..++.+ |+.
T Consensus 39 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~i~~v~q~~~l~~~tv~~--nl~ 116 (257)
T cd03288 39 HVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRF--NLD 116 (257)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhhEEEECCCCcccccHHHH--hcC
Confidence 39999999999999999999999999999865321 1223567899999999888776665 454
Q ss_pred cCCCCCCHHHHHHHHHHccchhhHhhCCccc---------------cccc-----------------ccCCCCHHHHHHH
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSIDKLPLGL---------------DTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~---------------~~~v-----------------~ts~LD~~~~~~i 197 (632)
.... ...+++.++++..++.+.+..+|.|+ .+++ +|++||+.+++.+
T Consensus 117 ~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l 195 (257)
T cd03288 117 PECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENIL 195 (257)
T ss_pred cCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHH
Confidence 3321 23445666666666666665555444 4333 3899999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
.+.++++.++.|+|++||+++.+..||+|++|++|++++.|+++++.....+.|..++
T Consensus 196 ~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 196 QKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred HHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 9999988778999999999999988999999999999999999999776555566554
No 132
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.89 E-value=1.4e-22 Score=202.53 Aligned_cols=160 Identities=43% Similarity=0.628 Sum_probs=125.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|+... .+...++.++|++|++.++..++.+ |+.
T Consensus 20 ~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~e--nl~ 97 (234)
T cd03251 20 DISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFNDTVAE--NIA 97 (234)
T ss_pred eeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeeccccHHH--Hhh
Confidence 39999999999999999999999999999865321 1123467799999999887766655 676
Q ss_pred cCCCCCCHHHHHHHHHHccchhhH---------------hhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSI---------------DKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i---------------~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
+.......+++.+.++..++.+.+ ..||.|..+++ +|++||+.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l 177 (234)
T cd03251 98 YGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLV 177 (234)
T ss_pred ccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHH
Confidence 654333444555555554444443 35666666655 3899999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+.|+++.++.|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 178 ~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 178 QAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred HHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 9999998778899999999999888999999999999999999888654
No 133
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=99.89 E-value=4.7e-23 Score=216.53 Aligned_cols=165 Identities=24% Similarity=0.381 Sum_probs=130.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------cHHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||+|++||+++|+||||||||||+++|.|+...+ ....++.++|++|++.+|.. ++.+ |+.+
T Consensus 20 ~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~e--ni~~ 97 (353)
T PRK10851 20 DISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFD--NIAF 97 (353)
T ss_pred EeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHHH--HHHh
Confidence 399999999999999999999999999998653211 11235679999999877643 4544 6766
Q ss_pred CCC------CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHH
Q 047286 151 GKQ------NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQA 199 (632)
Q Consensus 151 ~~~------~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~ 199 (632)
+.. ..+ .+++.++++..++.+ ...+||+|++++++ |++||+.+++.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~ 177 (353)
T PRK10851 98 GLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRR 177 (353)
T ss_pred hhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH
Confidence 532 112 345677788877754 45678889988883 99999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 200 AMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
.|+++.+ +.|+|++||+++.+.. ||+|++|++|++++.|+++++...+...|
T Consensus 178 ~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~~~~ 232 (353)
T PRK10851 178 WLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPATRF 232 (353)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccchH
Confidence 9999864 6899999999998755 99999999999999999999987765544
No 134
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.89 E-value=6.9e-23 Score=204.71 Aligned_cols=160 Identities=23% Similarity=0.294 Sum_probs=125.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c---HHhhcceEEEcccCccccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P---EAEQEKIGLVSKEPIFLFC-DFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~---~~~r~~i~~v~Q~~~~~~~-~~~~~ 145 (632)
.+||++++||+++|+||||||||||+++|.|+.... + ..+++.++|++|++.++.. ++.+
T Consensus 18 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~- 96 (235)
T cd03261 18 GVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLTVFE- 96 (235)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCcHHH-
Confidence 399999999999999999999999999998653210 1 2346779999999876653 5544
Q ss_pred cccccCCC---CCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 146 QYIPYGKQ---NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 146 ~~i~~~~~---~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.++.. ..+ .+++.++++.+++.+ .+..||+|+.+++ +|++||+.+++.+
T Consensus 97 -~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l 175 (235)
T cd03261 97 -NVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVI 175 (235)
T ss_pred -HHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHH
Confidence 5554311 112 234566777777644 4567899998887 3999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 176 ~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 176 DDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 999999853 7899999999998765 999999999999999999988654
No 135
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=99.89 E-value=6.6e-23 Score=216.52 Aligned_cols=164 Identities=23% Similarity=0.352 Sum_probs=131.0
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------cHHhhcceEEEcccCccccc-ccccccccccC
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIPYG 151 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~~ 151 (632)
+||++++||+++|+||||||||||+++|+|+.... ....++.++||+|++.+|.. ++.+ |+.++
T Consensus 33 vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~e--Ni~~~ 110 (375)
T PRK09452 33 LDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFE--NVAFG 110 (375)
T ss_pred eEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHH--HHHHH
Confidence 89999999999999999999999999999753221 01135779999999987643 5544 77765
Q ss_pred CC--CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHH
Q 047286 152 KQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKL 204 (632)
Q Consensus 152 ~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~ 204 (632)
.. ... .+++.++++..++.+ ...+||+|++++++ +++||+.+++.+.+.|+++
T Consensus 111 l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l 190 (375)
T PRK09452 111 LRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKAL 190 (375)
T ss_pred HhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHH
Confidence 32 112 345677788877755 45668889888884 8999999999999999998
Q ss_pred hC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 205 VT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 205 ~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
.+ +.|+|+|||+..++. .||+|++|++|+|++.|+++++.+.+...|
T Consensus 191 ~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~~~ 240 (375)
T PRK09452 191 QRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLF 240 (375)
T ss_pred HHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 54 789999999998865 599999999999999999999988766544
No 136
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=99.89 E-value=5.4e-23 Score=216.39 Aligned_cols=165 Identities=19% Similarity=0.316 Sum_probs=131.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc--H-------------HhhcceEEEcccCccccc-cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP--E-------------AEQEKIGLVSKEPIFLFC-DFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~--~-------------~~r~~i~~v~Q~~~~~~~-~~~~~~~i 148 (632)
.+||++++||+++|+||||||||||+++|.|+...+. . ..++.++||+|++.+|.. ++.+ |+
T Consensus 23 ~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~e--nl 100 (362)
T TIGR03258 23 DLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVED--NV 100 (362)
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHH--HH
Confidence 3999999999999999999999999999997643222 1 135679999999987643 4444 77
Q ss_pred ccCCC--CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHH
Q 047286 149 PYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAM 201 (632)
Q Consensus 149 ~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l 201 (632)
.++.. ... .+++.++++..++++ ...+||+|++++++ +++||+.+++.+.+.|
T Consensus 101 ~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l 180 (362)
T TIGR03258 101 AFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEI 180 (362)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHH
Confidence 66432 112 245677888877654 45678889888884 8999999999999999
Q ss_pred HHHhC---CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 202 VKLVT---NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 202 ~~~~~---~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+++.+ +.|+|++||+++++. .||+|++|++|++++.|+++++...+.+.|
T Consensus 181 ~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~~~~ 234 (362)
T TIGR03258 181 AALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPADGF 234 (362)
T ss_pred HHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcCcHH
Confidence 98854 679999999998875 499999999999999999999988765544
No 137
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.89 E-value=2.4e-22 Score=201.00 Aligned_cols=166 Identities=37% Similarity=0.564 Sum_probs=128.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||+|++|++++|+||||||||||+++|.|+... +....++.++|++|++.++..++.+ |+.
T Consensus 19 ~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~--nl~ 96 (236)
T cd03253 19 DVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVVPQDTVLFNDTIGY--NIR 96 (236)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEECCCChhhcchHHH--HHh
Confidence 38999999999999999999999999999865321 1122456799999999888766655 676
Q ss_pred cCCCCCCHHHHHHHHHHccchhhHh---------------hCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSID---------------KLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i~---------------~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
++......+++.+.++.+++.+.+. .||.|..+++ +|++||+.+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l 176 (236)
T cd03253 97 YGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREI 176 (236)
T ss_pred hcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHH
Confidence 6543344555566666666555443 4555665555 3899999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcCCCcHHHH
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIEDPEGAYSQ 253 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 253 (632)
.+.|.++.++.|+|++||+.+.+..||++++|++|++++.|+.+++... ...|..
T Consensus 177 ~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~ 231 (236)
T cd03253 177 QAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAE 231 (236)
T ss_pred HHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHH
Confidence 9999998668899999999999888999999999999999999888654 344443
No 138
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=99.89 E-value=5.6e-23 Score=212.58 Aligned_cols=160 Identities=18% Similarity=0.337 Sum_probs=126.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~ 149 (632)
.+||+|++||+++|+||||||||||+++|+|+...+ +...++++||+||++.++. .+..+ |+.
T Consensus 25 ~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e--~l~ 102 (306)
T PRK13537 25 GLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRE--NLL 102 (306)
T ss_pred cceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcHHH--HHH
Confidence 399999999999999999999999999998653221 1235678999999987654 34444 554
Q ss_pred cCC--CCCC----HHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 150 YGK--QNAS----DEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~~--~~~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+.. ...+ .+++.++++.+++. ..+..||.|+++++ +|++||+.+++.+++.|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~ 182 (306)
T PRK13537 103 VFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLR 182 (306)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHH
Confidence 311 1111 23456677777764 45778999998888 399999999999999999
Q ss_pred HHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 203 KLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 203 ~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
++. +++|+|++||+++.++. ||+|++|++|++++.|+++++...
T Consensus 183 ~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 183 SLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 985 47899999999999865 999999999999999999998654
No 139
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.89 E-value=8.4e-23 Score=212.87 Aligned_cols=171 Identities=22% Similarity=0.335 Sum_probs=130.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--c-----------------HHh----hcceEEEcccCcc-ccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--P-----------------EAE----QEKIGLVSKEPIF-LFC 140 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--~-----------------~~~----r~~i~~v~Q~~~~-~~~ 140 (632)
.+||+|++||+++|+||||||||||+++|.|+.... + ... ++.++|++|++.. ++.
T Consensus 25 ~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p 104 (326)
T PRK11022 25 RISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNP 104 (326)
T ss_pred eeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchhhcCC
Confidence 399999999999999999999999999998754210 0 111 1369999999852 333
Q ss_pred cccccccc----ccC--CC-CCCHHHHHHHHHHccchh-------hHhhCCcccccccc-----------------cCCC
Q 047286 141 DFNEGQYI----PYG--KQ-NASDEHIRPAVQLANAEK-------SIDKLPLGLDTVVA-----------------TNAV 189 (632)
Q Consensus 141 ~~~~~~~i----~~~--~~-~~~~~~~~~~~~~~~l~~-------~i~~l~~g~~~~v~-----------------ts~L 189 (632)
.++..+++ ... .. ....+++.++++.+++.+ ...+||+|+.++++ |++|
T Consensus 105 ~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~L 184 (326)
T PRK11022 105 CYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTAL 184 (326)
T ss_pred cCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCC
Confidence 33322122 111 11 112345778888888743 45678899988883 9999
Q ss_pred CHHHHHHHHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 190 DAQSERIVQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 190 D~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
|+.++..+++.|+++.+ +.|+|+|||++..+. .||+|++|++|+|++.|+.+++.+++.+.|.+..
T Consensus 185 D~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 185 DVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhhCCCChHHHHH
Confidence 99999999999999853 789999999999885 5999999999999999999999988777887543
No 140
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.89 E-value=7.2e-23 Score=213.47 Aligned_cols=170 Identities=20% Similarity=0.300 Sum_probs=130.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c---HHhhcceEEEcccCc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P---EAEQEKIGLVSKEPI-FLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~---~~~r~~i~~v~Q~~~-~~~~~~~~~ 145 (632)
.+||+|++||+++|+|+||||||||+++|.|+.... . ...+++++||+|+|. .++...+..
T Consensus 39 ~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~ 118 (331)
T PRK15079 39 GVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIG 118 (331)
T ss_pred eEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHH
Confidence 399999999999999999999999999998653211 1 124578999999983 233333333
Q ss_pred cccccCC----CCCC----HHHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCCHHHHH
Q 047286 146 QYIPYGK----QNAS----DEHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVDAQSER 195 (632)
Q Consensus 146 ~~i~~~~----~~~~----~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~ 195 (632)
+|+.+.. ...+ .+++.++++.+++. ....+||+|+.++++ |++||+.++.
T Consensus 119 ~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~ 198 (331)
T PRK15079 119 EIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQA 198 (331)
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHH
Confidence 3553211 1122 23456677777763 334578889988883 9999999999
Q ss_pred HHHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHH
Q 047286 196 IVQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQL 254 (632)
Q Consensus 196 ~i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~ 254 (632)
.+.+.|+++.+ +.|+|+||||+..+.. ||+|++|++|+|++.|+.+++..++...|.+.
T Consensus 199 ~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~~i~~~~~~py~~~ 260 (331)
T PRK15079 199 QVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTKA 260 (331)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCCHHHHH
Confidence 99999999854 7899999999999875 99999999999999999999988777777653
No 141
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=99.89 E-value=6.2e-23 Score=189.06 Aligned_cols=160 Identities=19% Similarity=0.370 Sum_probs=129.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC--------------CCcHHhhcceEEEcccCccccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF--------------YAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--------------~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~ 150 (632)
++||++++|++++|.|||||||||+|++|.++.. .+|...|++||+++.+.. ++..++..+|+.|
T Consensus 20 dVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~g-lY~RlT~rEnl~~ 98 (245)
T COG4555 20 DVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVLFGERG-LYARLTARENLKY 98 (245)
T ss_pred heeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcceecCCcC-hhhhhhHHHHHHH
Confidence 4999999999999999999999999999975432 246668999999997665 4556666667765
Q ss_pred CC-----C-CCCHHHHHHHHHHccc----hhhHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHH
Q 047286 151 GK-----Q-NASDEHIRPAVQLANA----EKSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~-----~-~~~~~~~~~~~~~~~l----~~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~ 203 (632)
.. . ...+.++.+..+..++ +.....+|.|++++|+ |+|||..+.+.+.+.+++
T Consensus 99 Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q 178 (245)
T COG4555 99 FARLNGLSRKEIKARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQ 178 (245)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHH
Confidence 31 1 1124455556665554 4556789999999883 999999999999999999
Q ss_pred HhC-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 204 LVT-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 204 ~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
++. ++++|+.||.+++++. ||+|+++++|+++..|+.+++..
T Consensus 179 ~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 179 LKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred hhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 975 8999999999999984 99999999999999999998864
No 142
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.89 E-value=8e-23 Score=206.61 Aligned_cols=162 Identities=20% Similarity=0.295 Sum_probs=127.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC-CC---------------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF-YA---------------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~-~~---------------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|+.. +. +..+++.++|++|++.+|..++
T Consensus 24 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv 103 (253)
T PRK14242 24 DISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPFPKSI 103 (253)
T ss_pred ceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCCcCcH
Confidence 3999999999999999999999999999987521 00 0123567999999998776555
Q ss_pred ccccccccCC--CC-----CCHHHHHHHHHHccch--------hhHhhCCcccccccc-----------------cCCCC
Q 047286 143 NEGQYIPYGK--QN-----ASDEHIRPAVQLANAE--------KSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~--~~-----~~~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
.+ |+.++. .. ...+++.++++.+++. .....||+|+.++++ |++||
T Consensus 104 ~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD 181 (253)
T PRK14242 104 FE--NVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALD 181 (253)
T ss_pred HH--HHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 55 565431 11 1134566677777763 235678999988873 99999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+.+++.+.+.|+++.++.|+|++||+++.+. .||++++|++|++++.|+++++...+.
T Consensus 182 ~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 240 (253)
T PRK14242 182 PIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFTRPR 240 (253)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCC
Confidence 9999999999999877789999999999885 499999999999999999999876543
No 143
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.89 E-value=1e-22 Score=205.84 Aligned_cols=166 Identities=22% Similarity=0.334 Sum_probs=129.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|.|+.... ....++.++|++|++.++..++
T Consensus 25 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv 104 (254)
T PRK14273 25 NINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFLMSI 104 (254)
T ss_pred ceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccccCcH
Confidence 399999999999999999999999999998653210 0124667999999998775555
Q ss_pred ccccccccCCC--C-CC----HHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCC
Q 047286 143 NEGQYIPYGKQ--N-AS----DEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~-~~----~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
.+ |+.++.. . .. .+++.++++.+++ +.....||+|++++++ |++||
T Consensus 105 ~e--ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD 182 (254)
T PRK14273 105 YD--NISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALD 182 (254)
T ss_pred HH--HHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccC
Confidence 55 6655321 1 11 2345666666654 3345678999988773 99999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
+.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++.+.+...|.
T Consensus 183 ~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 245 (254)
T PRK14273 183 PISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFFNPKNTKT 245 (254)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCChHH
Confidence 99999999999999777899999999998755 999999999999999999999866555443
No 144
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.89 E-value=1.2e-22 Score=204.31 Aligned_cols=162 Identities=22% Similarity=0.336 Sum_probs=128.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-C-----------------cHHhhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-A-----------------PEAEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-~-----------------~~~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
.+||++++||+++|+||||||||||+++|.|+... . ....++.++|++|++.+|..++.+
T Consensus 20 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~~tv~e-- 97 (246)
T PRK14269 20 DINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYE-- 97 (246)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCccccccHHH--
Confidence 39999999999999999999999999999875310 0 123466799999999888766655
Q ss_pred ccccCCC--------CCCHHHHHHHHHHccch--------hhHhhCCcccccccc-----------------cCCCCHHH
Q 047286 147 YIPYGKQ--------NASDEHIRPAVQLANAE--------KSIDKLPLGLDTVVA-----------------TNAVDAQS 193 (632)
Q Consensus 147 ~i~~~~~--------~~~~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v~-----------------ts~LD~~~ 193 (632)
|+.++.. ....+++.++++.+++. .....||.|..++++ |++||+.+
T Consensus 98 ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~ 177 (246)
T PRK14269 98 NISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPIS 177 (246)
T ss_pred HhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHH
Confidence 5654311 11123456777877773 234568889888773 99999999
Q ss_pred HHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 194 ERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 194 ~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+..+.+.|.++.+++|+|++||+++.+. .||++++|++|++++.|+++++...+.
T Consensus 178 ~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 233 (246)
T PRK14269 178 SGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENPK 233 (246)
T ss_pred HHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCCC
Confidence 9999999999877889999999999876 599999999999999999999876543
No 145
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=99.89 E-value=1.1e-22 Score=214.33 Aligned_cols=162 Identities=22% Similarity=0.313 Sum_probs=131.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------------cHHhhcceEEEcccCccccc-cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------------PEAEQEKIGLVSKEPIFLFC-DFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------------~~~~r~~i~~v~Q~~~~~~~-~~~~ 144 (632)
.+||++++||+++|+||||||||||+++|.|+...+ ....++.++|++|++.+|.. ++.+
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e 95 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKVRG 95 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcHHH
Confidence 389999999999999999999999999998653211 11235789999999976642 4444
Q ss_pred ccccccCCCCCCHHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHH
Q 047286 145 GQYIPYGKQNASDEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 145 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~ 203 (632)
|+.++......+++.++++..++.+. ...||+|++++++ |++||+.+++.+.+.|++
T Consensus 96 --nl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~ 173 (352)
T PRK11144 96 --NLRYGMAKSMVAQFDKIVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLER 173 (352)
T ss_pred --HHHhhhhhhhHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 77766444445678888888887654 4568889888883 999999999999999998
Q ss_pred HhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 204 LVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+.+ +.|+|++||+++.+.. ||++++|++|++++.|+++++...+.
T Consensus 174 l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 174 LAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred HHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 853 6899999999988755 99999999999999999999987754
No 146
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=99.89 E-value=7.3e-23 Score=215.68 Aligned_cols=166 Identities=20% Similarity=0.361 Sum_probs=130.8
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--------------C-----cHH---hh-cceEEEcccCcccc-cc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--------------A-----PEA---EQ-EKIGLVSKEPIFLF-CD 141 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--------------~-----~~~---~r-~~i~~v~Q~~~~~~-~~ 141 (632)
+||+|++||+++|+||||||||||+++|.|+... + +.. .| ++++|++|++.+|+ .+
T Consensus 43 vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~T 122 (382)
T TIGR03415 43 ASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLT 122 (382)
T ss_pred eEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCc
Confidence 9999999999999999999999999999865211 0 111 12 57999999998775 45
Q ss_pred cccccccccCCC--CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHH
Q 047286 142 FNEGQYIPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSE 194 (632)
Q Consensus 142 ~~~~~~i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~ 194 (632)
+.+ |+.++.. ... .+++.++++..++.+ ...+||+|++++++ |++||+.++
T Consensus 123 v~e--Ni~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r 200 (382)
T TIGR03415 123 VEE--NVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIR 200 (382)
T ss_pred HHH--HHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHH
Confidence 555 6765421 111 245677888888754 45678899988883 999999999
Q ss_pred HHHHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHHH
Q 047286 195 RIVQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYSQ 253 (632)
Q Consensus 195 ~~i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 253 (632)
+.+++.|.++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++...+...|.+
T Consensus 201 ~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 262 (382)
T TIGR03415 201 TQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVA 262 (382)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHH
Confidence 999999999854 789999999999874 59999999999999999999998765555543
No 147
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.89 E-value=1.2e-22 Score=204.54 Aligned_cols=163 Identities=22% Similarity=0.348 Sum_probs=127.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|.|+.... ....++.++|++|++.++..++
T Consensus 19 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~tv 98 (247)
T TIGR00972 19 NINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPFPMSI 98 (247)
T ss_pred ceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccCCCCH
Confidence 399999999999999999999999999998654211 1123567999999998776555
Q ss_pred ccccccccCC--CC-CC----HHHHHHHHHHccch----h----hHhhCCccccccc-----------------ccCCCC
Q 047286 143 NEGQYIPYGK--QN-AS----DEHIRPAVQLANAE----K----SIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~--~~-~~----~~~~~~~~~~~~l~----~----~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.+ |+.++. .. .. .+++.++++..++. + ....||+|+.+++ +|++||
T Consensus 99 ~e--~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD 176 (247)
T TIGR00972 99 YD--NIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALD 176 (247)
T ss_pred HH--HHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 54 554421 11 11 24566777777775 2 3467888988877 399999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++...+..
T Consensus 177 ~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 236 (247)
T TIGR00972 177 PIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFTNPKE 236 (247)
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCC
Confidence 99999999999998767899999999998764 999999999999999999998765433
No 148
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=99.89 E-value=7.7e-23 Score=186.89 Aligned_cols=153 Identities=20% Similarity=0.252 Sum_probs=121.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC------------------CCcHHhhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF------------------YAPEAEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~------------------~~~~~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
++||+|++||++.|+||||||||||+|+|.+... .+..-+|++||+|+||.-+.. ..+..+
T Consensus 20 ~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~-~~tvye 98 (223)
T COG2884 20 DVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP-DRTVYE 98 (223)
T ss_pred CceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhheeeeEeeeccccc-cchHhh
Confidence 3999999999999999999999999999974311 112237999999999976543 333344
Q ss_pred ccccCCC------CCCHHHHHHHHHHccchhhHhh----CCcccccccc-----------------cCCCCHHHHHHHHH
Q 047286 147 YIPYGKQ------NASDEHIRPAVQLANAEKSIDK----LPLGLDTVVA-----------------TNAVDAQSERIVQA 199 (632)
Q Consensus 147 ~i~~~~~------~~~~~~~~~~~~~~~l~~~i~~----l~~g~~~~v~-----------------ts~LD~~~~~~i~~ 199 (632)
|+.+... ....+++.++++.+++.+.... ||+|.+++++ |.+|||....++++
T Consensus 99 NVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~ 178 (223)
T COG2884 99 NVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMR 178 (223)
T ss_pred hhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHH
Confidence 7776532 1234667889999998876655 5578888873 99999999999999
Q ss_pred HHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 200 AMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 200 ~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
.+.++. .|.||++.||+.+.+.. -.|++.+++|+++.+.
T Consensus 179 lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 179 LFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999996 48999999999999976 6789999999998764
No 149
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.89 E-value=2.2e-22 Score=200.27 Aligned_cols=159 Identities=36% Similarity=0.560 Sum_probs=125.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|..... +...++.++|++|++.++..++.+ |+.
T Consensus 21 ~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~--~~~ 98 (229)
T cd03254 21 DINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSGTIME--NIR 98 (229)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhhHHHH--HHh
Confidence 399999999999999999999999999998653211 123467799999999877766655 666
Q ss_pred cCCCCCCHHHHHHHHHHccchhhH---------------hhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSI---------------DKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i---------------~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
+.......+++.++++.+++.+.+ ..||.|+.+++ +|++||+.+++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l 178 (229)
T cd03254 99 LGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLI 178 (229)
T ss_pred ccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHH
Confidence 654333455666666666655444 45666666665 3899999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhc
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
.+.|+++.+++|+|++||++..++.||++++|++|++++.|+.+++..
T Consensus 179 ~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 179 QEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred HHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999877889999999999888899999999999999998887754
No 150
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=99.89 E-value=1.7e-22 Score=204.96 Aligned_cols=165 Identities=22% Similarity=0.311 Sum_probs=128.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----------------------CcHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----------------------APEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----------------------~~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|.|+... +....+++++|++|++.++..++
T Consensus 31 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~tv 110 (260)
T PRK10744 31 NINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPFPMSI 110 (260)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccCcCcH
Confidence 39999999999999999999999999999876320 01124678999999998776555
Q ss_pred ccccccccCCC---CCC----HHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCC
Q 047286 143 NEGQYIPYGKQ---NAS----DEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~---~~~----~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
.+ |+.++.. ..+ .+++.++++.+++ +.....||+|..++++ |++||
T Consensus 111 ~~--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD 188 (260)
T PRK10744 111 YD--NIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALD 188 (260)
T ss_pred HH--HHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCC
Confidence 54 5554321 112 2456677777765 2335678999988773 99999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.+++.+.+.|+++.++.|+|++||+++.+. .||++++|++|++++.|+.+++...+...+
T Consensus 189 ~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 250 (260)
T PRK10744 189 PISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIFTKPAKKQ 250 (260)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCcHH
Confidence 9999999999999877789999999999885 499999999999999999999876544433
No 151
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=99.89 E-value=1.2e-22 Score=209.59 Aligned_cols=160 Identities=21% Similarity=0.324 Sum_probs=126.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------------------------------CcHHhh
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------------------------------APEAEQ 125 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------------------------------~~~~~r 125 (632)
.+||+|++||+++|+||||||||||+++|+|+... .+..++
T Consensus 25 ~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (305)
T PRK13651 25 NVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIR 104 (305)
T ss_pred eeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccccccccccccccccccchHHHHH
Confidence 39999999999999999999999999999875211 012356
Q ss_pred cceEEEcccC--cccccccccccccccCCC--CCC----HHHHHHHHHHccch-h----hHhhCCcccccccc-------
Q 047286 126 EKIGLVSKEP--IFLFCDFNEGQYIPYGKQ--NAS----DEHIRPAVQLANAE-K----SIDKLPLGLDTVVA------- 185 (632)
Q Consensus 126 ~~i~~v~Q~~--~~~~~~~~~~~~i~~~~~--~~~----~~~~~~~~~~~~l~-~----~i~~l~~g~~~~v~------- 185 (632)
+.+|||+|+| .+|..++.+ |+.++.. ... .+++.++++.+++. + ....||+|++++++
T Consensus 105 ~~ig~v~Q~~~~~l~~~tv~e--~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqrvalA~aL~~ 182 (305)
T PRK13651 105 RRVGVVFQFAEYQLFEQTIEK--DIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQRSPFELSGGQKRRVALAGILAM 182 (305)
T ss_pred hceEEEeeCcccccccccHHH--HHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHHh
Confidence 7899999986 445555555 6666532 122 34567778888874 3 46678899988873
Q ss_pred ----------cCCCCHHHHHHHHHHHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 186 ----------TNAVDAQSERIVQAAMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 186 ----------ts~LD~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|++||+.+++.+.+.|+++. .+.|+|++||+++.+. .||||++|++|++++.|+++++...
T Consensus 183 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 183 EPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999885 4789999999998764 5999999999999999999998654
No 152
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=1.2e-22 Score=211.50 Aligned_cols=171 Identities=24% Similarity=0.330 Sum_probs=130.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c---HHhhcceEEEcccCc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P---EAEQEKIGLVSKEPI-FLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~---~~~r~~i~~v~Q~~~-~~~~~~~~~ 145 (632)
.+||+|++||+++|+|+||||||||+++|.|+.... . ...|++++||+|+|. .++..++..
T Consensus 33 ~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~ 112 (327)
T PRK11308 33 GVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVG 112 (327)
T ss_pred eeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHH
Confidence 399999999999999999999999999998653211 1 124678999999984 233333322
Q ss_pred ccccc------CC-CCCCHHHHHHHHHHccchh-----hHhhCCcccccccc-----------------cCCCCHHHHHH
Q 047286 146 QYIPY------GK-QNASDEHIRPAVQLANAEK-----SIDKLPLGLDTVVA-----------------TNAVDAQSERI 196 (632)
Q Consensus 146 ~~i~~------~~-~~~~~~~~~~~~~~~~l~~-----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~ 196 (632)
+++.. +. .....+++.++++.+++.+ ...+||+|+.++++ |++||+.+++.
T Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~ 192 (327)
T PRK11308 113 QILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQ 192 (327)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHH
Confidence 23321 10 1112345677888887742 34578889888873 99999999999
Q ss_pred HHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 197 VQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 197 i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
+++.|+++.+ +.|+|+|||++..+.. ||+|++|++|+|++.|+.+++.+++...|.+..
T Consensus 193 i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 193 VLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQIFNNPRHPYTQAL 254 (327)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcCCCCHHHHHH
Confidence 9999999854 7899999999999975 999999999999999999999988777787543
No 153
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=2e-22 Score=204.32 Aligned_cols=165 Identities=21% Similarity=0.291 Sum_probs=127.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC--C-----C---------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF--Y-----A---------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--~-----~---------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|.|... + . ....++.++|++|++.++..++
T Consensus 30 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~tv 109 (259)
T PRK14274 30 NINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPFPQSI 109 (259)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcccccCH
Confidence 3999999999999999999999999999987532 1 0 1134567999999998777665
Q ss_pred ccccccccCCC--C-CC----HHHHHHHHHHccch--------hhHhhCCccccccc-----------------ccCCCC
Q 047286 143 NEGQYIPYGKQ--N-AS----DEHIRPAVQLANAE--------KSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~-~~----~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.+ |+.++.. . .. .+++.++++..++. .....||+|+.+++ +|++||
T Consensus 110 ~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD 187 (259)
T PRK14274 110 FD--NVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALD 187 (259)
T ss_pred HH--HHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 55 5554321 1 11 22345566666653 34567888988777 399999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..++...|
T Consensus 188 ~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 249 (259)
T PRK14274 188 PVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFSNPDDQR 249 (259)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhhCCCCHH
Confidence 99999999999998777899999999998764 99999999999999999999876544433
No 154
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=1.4e-22 Score=204.57 Aligned_cols=165 Identities=19% Similarity=0.332 Sum_probs=129.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC------C----------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY------A----------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~------~----------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|+|+... . ....++.++|++|++.+|..++
T Consensus 22 ~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~tv 101 (251)
T PRK14251 22 GISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTPFPFSV 101 (251)
T ss_pred eeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCccCCCcH
Confidence 39999999999999999999999999999976420 0 0124567999999998776666
Q ss_pred ccccccccCCC--C-C----CHHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCC
Q 047286 143 NEGQYIPYGKQ--N-A----SDEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~-~----~~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
.+ |+.++.. . . ..+++.++++..++ +.....||+|..++++ |++||
T Consensus 102 ~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD 179 (251)
T PRK14251 102 YD--NVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALD 179 (251)
T ss_pred HH--HHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCC
Confidence 55 5554311 1 1 12345666776665 3346789999988773 89999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.+++.+.+.|+++.++.|+|++||+++.+.. ||+|++|++|++++.|+++++...+...|
T Consensus 180 ~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 241 (251)
T PRK14251 180 PISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFIAPKKQI 241 (251)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHhCCCCHH
Confidence 99999999999998777899999999998765 99999999999999999999876544444
No 155
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=1.7e-22 Score=204.65 Aligned_cols=165 Identities=22% Similarity=0.344 Sum_probs=128.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------C---------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------A---------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------~---------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|.|+... . ....++.++|++|++.+|..++
T Consensus 30 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv 109 (258)
T PRK14268 30 NVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPFPMSI 109 (258)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccCcccH
Confidence 39999999999999999999999999999875321 0 0123567999999998776555
Q ss_pred ccccccccCCC--CCC----HHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCCH
Q 047286 143 NEGQYIPYGKQ--NAS----DEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVDA 191 (632)
Q Consensus 143 ~~~~~i~~~~~--~~~----~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD~ 191 (632)
.+ |+.++.. ... .+++.++++.+++ +.....||+|+.++++ |++||+
T Consensus 110 ~e--nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~ 187 (258)
T PRK14268 110 YD--NVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDP 187 (258)
T ss_pred HH--HHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCH
Confidence 55 5554311 112 2345667776665 3346789999988873 999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++...+...|
T Consensus 188 ~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 248 (258)
T PRK14268 188 ISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHNPREKS 248 (258)
T ss_pred HHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCCHH
Confidence 9999999999998767899999999998854 99999999999999999999976544443
No 156
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=2.4e-22 Score=201.45 Aligned_cols=167 Identities=23% Similarity=0.378 Sum_probs=131.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|.... .+...++.++|++|++.++..++.+ |+.
T Consensus 21 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~tv~e--~l~ 98 (241)
T PRK14250 21 DISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFEGTVKD--NIE 98 (241)
T ss_pred eeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEEEecCchhchhhHHH--HHh
Confidence 39999999999999999999999999999865321 1123467899999999877655555 555
Q ss_pred cCCC--CCCHHHHHHHHHHccch-h----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh
Q 047286 150 YGKQ--NASDEHIRPAVQLANAE-K----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV 205 (632)
Q Consensus 150 ~~~~--~~~~~~~~~~~~~~~l~-~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~ 205 (632)
++.. ....+++.++++..++. + ....||+|..+++ +|++||+.+++.+.+.|+++.
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~ 178 (241)
T PRK14250 99 YGPMLKGEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLK 178 (241)
T ss_pred cchhhcCcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH
Confidence 4321 12245667778887774 2 3567889988877 399999999999999999885
Q ss_pred C--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHH
Q 047286 206 T--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQ 253 (632)
Q Consensus 206 ~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 253 (632)
+ +.|+|++||+++.+.. ||+|++|++|++++.|+++++...+...+..
T Consensus 179 ~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 179 NKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred HhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 3 7899999999998765 9999999999999999999987654444443
No 157
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.88 E-value=1.5e-22 Score=202.69 Aligned_cols=161 Identities=24% Similarity=0.375 Sum_probs=124.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCcccc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLF-CDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~ 150 (632)
.+||++++|++++|+||||||||||+++|.|+..... ...++.++|++|++.++. .++.+ |+.+
T Consensus 20 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e--~l~~ 97 (239)
T cd03296 20 DVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVFD--NVAF 97 (239)
T ss_pred eeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEecCCcccCCCCHHH--HHhh
Confidence 3999999999999999999999999999986532110 012457999999987664 35554 5654
Q ss_pred CCC--CC----C----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHH
Q 047286 151 GKQ--NA----S----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQA 199 (632)
Q Consensus 151 ~~~--~~----~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~ 199 (632)
+.. .. . .+++.++++..++.+ .+..||.|+.++++ |++||+.+++.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~ 177 (239)
T cd03296 98 GLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRR 177 (239)
T ss_pred hhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 321 00 1 234566777777653 45678999988873 99999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCC
Q 047286 200 AMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.+
T Consensus 178 ~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 228 (239)
T cd03296 178 WLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDHP 228 (239)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcCC
Confidence 9999853 6899999999998754 9999999999999999999987543
No 158
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=99.88 E-value=4e-22 Score=199.65 Aligned_cols=160 Identities=43% Similarity=0.625 Sum_probs=124.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|.... .+...++.++|++|++.++..++.+ |+.
T Consensus 21 ~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~e--~l~ 98 (238)
T cd03249 21 GLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFDGTIAE--NIR 98 (238)
T ss_pred ceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhhhhHHH--Hhh
Confidence 39999999999999999999999999999865321 1122356799999999877666555 666
Q ss_pred cCCCCCCHHHHHHHHHHccchhhH---------------hhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSI---------------DKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i---------------~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
++......+++.+.++..++.+.+ ..||+|+.+++ +|++||+.+++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l 178 (238)
T cd03249 99 YGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLV 178 (238)
T ss_pred ccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHH
Confidence 654333344455555555544433 45666666655 3899999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 179 ~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 179 QEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred HHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999988777899999999998888999999999999999998888654
No 159
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=1.2e-22 Score=208.62 Aligned_cols=160 Identities=26% Similarity=0.386 Sum_probs=126.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-----------------cHHhhcceEEEcccC--cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-----------------PEAEQEKIGLVSKEP--IFLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-----------------~~~~r~~i~~v~Q~~--~~~~~~~~~~ 145 (632)
.+||+|++||+++|+||||||||||+++|+|+.... +...++++||++|+| .++..++.+
T Consensus 25 ~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e- 103 (287)
T PRK13637 25 NVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEETIEK- 103 (287)
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHhhceEEEecCchhccccccHHH-
Confidence 399999999999999999999999999998653210 123567899999997 345556655
Q ss_pred cccccCCC--CCC----HHHHHHHHHHccch------hhHhhCCcccccccc-----------------cCCCCHHHHHH
Q 047286 146 QYIPYGKQ--NAS----DEHIRPAVQLANAE------KSIDKLPLGLDTVVA-----------------TNAVDAQSERI 196 (632)
Q Consensus 146 ~~i~~~~~--~~~----~~~~~~~~~~~~l~------~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~ 196 (632)
|+.++.. ..+ .+++.++++.+++. ..+..||+|+.++++ |++||+.+++.
T Consensus 104 -~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~ 182 (287)
T PRK13637 104 -DIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDE 182 (287)
T ss_pred -HHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHH
Confidence 5655421 122 23567788888774 336778999988873 99999999999
Q ss_pred HHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 197 VQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 197 i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.+.|+++.+ +.|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 183 l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 183 ILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999853 789999999999875 5999999999999999999998653
No 160
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=99.88 E-value=9e-23 Score=202.83 Aligned_cols=157 Identities=24% Similarity=0.360 Sum_probs=123.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC-----CCC-----------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFR-----FYA-----------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~-----~~~-----------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|+. ... ....++.++|++|++.++..++
T Consensus 18 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~tv 97 (227)
T cd03260 18 DISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPFPGSI 97 (227)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHHhhEEEEecCchhccccH
Confidence 399999999999999999999999999998764 211 1123567999999998764455
Q ss_pred ccccccccCCC--C-C----CHHHHHHHHHHccchhh------HhhCCccccccc-----------------ccCCCCHH
Q 047286 143 NEGQYIPYGKQ--N-A----SDEHIRPAVQLANAEKS------IDKLPLGLDTVV-----------------ATNAVDAQ 192 (632)
Q Consensus 143 ~~~~~i~~~~~--~-~----~~~~~~~~~~~~~l~~~------i~~l~~g~~~~v-----------------~ts~LD~~ 192 (632)
.+ |+.++.. . . ..+++.++++..++.+. ...||+|+.+++ +|++||+.
T Consensus 98 ~e--~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~ 175 (227)
T cd03260 98 YD--NVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPI 175 (227)
T ss_pred HH--HHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHH
Confidence 44 5554311 1 1 13456777888777543 367888988877 39999999
Q ss_pred HHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHH
Q 047286 193 SERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 193 ~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el 243 (632)
+++.+.+.|+++.++.|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 176 ~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 176 STAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999865589999999999876 4999999999999999987653
No 161
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=99.88 E-value=8.4e-23 Score=211.39 Aligned_cols=160 Identities=18% Similarity=0.294 Sum_probs=126.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCccccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~ 149 (632)
.+||+|++||+++|+||||||||||+++|+|+...+ +...++.+||++|++.++.. ++.+ |+.
T Consensus 11 ~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--~l~ 88 (302)
T TIGR01188 11 GVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRE--NLE 88 (302)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHH--HHH
Confidence 399999999999999999999999999998653211 12346789999999876543 4444 554
Q ss_pred cCC--CCC----CHHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 150 YGK--QNA----SDEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~~--~~~----~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+.. ... ..+++.++++.+++. ..+..||+|+++++ +|++||+.+++.+++.|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~ 168 (302)
T TIGR01188 89 MMGRLYGLPKDEAEERAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIR 168 (302)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHH
Confidence 421 111 134567788888764 35678999999888 399999999999999999
Q ss_pred HHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 203 KLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 203 ~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
++. ++.|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 169 ~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 169 ALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 985 47899999999998865 999999999999999999998643
No 162
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=99.88 E-value=1.5e-22 Score=215.08 Aligned_cols=160 Identities=18% Similarity=0.290 Sum_probs=128.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFL-FCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~-~~~~~~~~~i 148 (632)
.+||++++||+++|+||||||||||+|+|.|+... .+.+.+++++||+|++.++ ..+..+ |+
T Consensus 21 ~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~e--~v 98 (402)
T PRK09536 21 GVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVRQ--VV 98 (402)
T ss_pred eeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHHH--HH
Confidence 39999999999999999999999999999865221 2234567899999998753 334444 55
Q ss_pred ccCCC----------CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 149 PYGKQ----------NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 149 ~~~~~----------~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
.++.. ....++++++++..++.+ .+.+||+|+++++ +|++||+.++..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l 178 (402)
T PRK09536 99 EMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRT 178 (402)
T ss_pred HhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHH
Confidence 54421 112345778888887753 4678999999888 3999999999999
Q ss_pred HHHHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 198 QAAMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 198 ~~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
++.|+++. ++.|+|++||+++.+. .|||+++|++|++++.|++++++..
T Consensus 179 ~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 179 LELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 99999986 4789999999999985 5999999999999999999998754
No 163
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=99.88 E-value=1.4e-22 Score=214.61 Aligned_cols=165 Identities=19% Similarity=0.322 Sum_probs=130.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||++++|++++|+||||||||||+++|.|+...+. ...++.++|++|++.+|.. ++.+ |+.+
T Consensus 21 ~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~e--ni~~ 98 (369)
T PRK11000 21 DINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVAE--NMSF 98 (369)
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHHH--HHHh
Confidence 3999999999999999999999999999987632110 1135679999999877643 5544 6765
Q ss_pred CCC--CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~ 203 (632)
+.. ... .+++.++++..++.+ .+.+||+|++++++ |++||+.+++.+.+.|++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~ 178 (369)
T PRK11000 99 GLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISR 178 (369)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 422 111 245677888888754 45678899988883 999999999999999998
Q ss_pred HhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 204 LVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.+ +.|+|++||+++.+. .||+|++|++|++++.|+++++...+...+
T Consensus 179 l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~~~ 229 (369)
T PRK11000 179 LHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPANRF 229 (369)
T ss_pred HHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 853 789999999998875 499999999999999999999987655443
No 164
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=1.5e-22 Score=212.62 Aligned_cols=165 Identities=20% Similarity=0.365 Sum_probs=128.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---HhhcceEEEcccCcccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---AEQEKIGLVSKEPIFLF-CDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~~r~~i~~v~Q~~~~~~-~~~~~~ 145 (632)
.+||+|++||+++|+||||||||||+++|.|+.... +. ..+++++|++|++.++. .++.+
T Consensus 23 ~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~e- 101 (343)
T PRK11153 23 NVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRTVFD- 101 (343)
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCcHHH-
Confidence 399999999999999999999999999998653211 11 13578999999998664 35544
Q ss_pred cccccCCC--CCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 146 QYIPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.++.. ..+ .+++.++++..++.+ ...+||+|+.+++ +|++||+.+++.+.
T Consensus 102 -ni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~ 180 (343)
T PRK11153 102 -NVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSIL 180 (343)
T ss_pred -HHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 5654311 111 245667778777654 4567899998888 39999999999999
Q ss_pred HHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 199 AAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 199 ~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.|+++.+ +.|+|++||+++.+.. ||++++|++|++++.|+++++...+...+
T Consensus 181 ~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 236 (343)
T PRK11153 181 ELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKHPL 236 (343)
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHH
Confidence 99999853 7899999999998865 99999999999999999999976644433
No 165
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=99.88 E-value=1.8e-22 Score=203.93 Aligned_cols=163 Identities=22% Similarity=0.301 Sum_probs=126.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc----------------------HHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP----------------------EAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~----------------------~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|+....| ..+++.++|++|++.+|..++
T Consensus 23 ~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~tv 102 (252)
T PRK14239 23 SVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPFPMSI 102 (252)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccCcCcH
Confidence 3999999999999999999999999999987522111 123567999999998776666
Q ss_pred ccccccccCC---CCC----CHHHHHHHHHHccc--------hhhHhhCCccccccc-----------------ccCCCC
Q 047286 143 NEGQYIPYGK---QNA----SDEHIRPAVQLANA--------EKSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~---~~~----~~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.+ |+.++. ... ..+++.++++.+++ +.....||.|..+++ +|++||
T Consensus 103 ~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 180 (252)
T PRK14239 103 YE--NVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALD 180 (252)
T ss_pred HH--HHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccC
Confidence 55 555321 111 12344556666654 234567899988877 399999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
+.+++.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++.+.+..
T Consensus 181 ~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~ 240 (252)
T PRK14239 181 PISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFMNPKH 240 (252)
T ss_pred HHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCC
Confidence 9999999999999876789999999998875 5999999999999999999998765443
No 166
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=1.8e-22 Score=213.64 Aligned_cols=166 Identities=23% Similarity=0.334 Sum_probs=131.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------cHHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||++++||+++|+||||||||||+++|.|+...+ ....++.+|||+|++.+|.. ++.+ |+.+
T Consensus 37 ~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~e--Ni~~ 114 (377)
T PRK11607 37 DVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQ--NIAF 114 (377)
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHH--HHHH
Confidence 399999999999999999999999999998763221 11246789999999987653 5544 7776
Q ss_pred CCC--CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~ 203 (632)
+.. ... .+++.++++..++.+ ....||+|++++++ +++||+.+++.+.+.|++
T Consensus 115 ~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~ 194 (377)
T PRK11607 115 GLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVD 194 (377)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 532 112 345667778777754 45678889988884 899999999999999888
Q ss_pred Hh--CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 204 LV--TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 204 ~~--~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
+. .+.|+|++||+.+++. .||+|++|++|++++.|+++++...+...|.
T Consensus 195 l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~~ 246 (377)
T PRK11607 195 ILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYS 246 (377)
T ss_pred HHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHHH
Confidence 74 3689999999999865 5999999999999999999999887665443
No 167
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.88 E-value=1.9e-22 Score=210.40 Aligned_cols=171 Identities=19% Similarity=0.269 Sum_probs=129.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC------------------cHH---hh-cceEEEcccCc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA------------------PEA---EQ-EKIGLVSKEPI-FLFCD 141 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~------------------~~~---~r-~~i~~v~Q~~~-~~~~~ 141 (632)
.+||+|++||+++|+|+||||||||+++|.|+.... ..+ .| +.|+||+|++. .++..
T Consensus 34 ~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~ 113 (330)
T PRK09473 34 DLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTSLNPY 113 (330)
T ss_pred eeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhhcCCC
Confidence 399999999999999999999999999998654221 011 12 47999999984 23333
Q ss_pred cccccccccC---CCCCC----HHHHHHHHHHccchh-------hHhhCCcccccccc-----------------cCCCC
Q 047286 142 FNEGQYIPYG---KQNAS----DEHIRPAVQLANAEK-------SIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 142 ~~~~~~i~~~---~~~~~----~~~~~~~~~~~~l~~-------~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
++..+++... ....+ .+++.++++.+++.+ ...+||+|+.++++ |++||
T Consensus 114 ~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD 193 (330)
T PRK09473 114 MRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALD 193 (330)
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCC
Confidence 3322233211 01112 234566777777642 45678889988883 99999
Q ss_pred HHHHHHHHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 191 AQSERIVQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
+.++..+.+.|+++.+ +.|+|+||||+..+.. ||+|++|++|+|++.|+++++.+.+.+.|.+..
T Consensus 194 ~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 194 VTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPSHPYSIGL 261 (330)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHH
Confidence 9999999999999854 7899999999999864 999999999999999999999988888887643
No 168
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=2.1e-22 Score=210.59 Aligned_cols=170 Identities=22% Similarity=0.282 Sum_probs=129.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----C---------------cHHh----hcceEEEcccCcc-ccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----A---------------PEAE----QEKIGLVSKEPIF-LFC 140 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----~---------------~~~~----r~~i~~v~Q~~~~-~~~ 140 (632)
.+||+|++||+++|+|+||||||||+++|.|+... . +... ++.++||+|++.. ++.
T Consensus 25 ~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p 104 (330)
T PRK15093 25 RVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQSCLDP 104 (330)
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcchhcCc
Confidence 39999999999999999999999999999876421 0 1111 2469999999863 333
Q ss_pred ccccccccccC-----C-----CC--CCHHHHHHHHHHccchh-------hHhhCCcccccccc----------------
Q 047286 141 DFNEGQYIPYG-----K-----QN--ASDEHIRPAVQLANAEK-------SIDKLPLGLDTVVA---------------- 185 (632)
Q Consensus 141 ~~~~~~~i~~~-----~-----~~--~~~~~~~~~~~~~~l~~-------~i~~l~~g~~~~v~---------------- 185 (632)
..+..+++... . .. ...+++.++++.+++.+ ...+||+|+.++++
T Consensus 105 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDE 184 (330)
T PRK15093 105 SERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLLIADE 184 (330)
T ss_pred cccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 33222233210 0 00 11345678888888753 34578899988883
Q ss_pred -cCCCCHHHHHHHHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHH
Q 047286 186 -TNAVDAQSERIVQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQL 254 (632)
Q Consensus 186 -ts~LD~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~ 254 (632)
|++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+.+++..++...|.+.
T Consensus 185 Pts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 185 PTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHH
Confidence 999999999999999999864 7899999999999965 99999999999999999999988777788653
No 169
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=1.8e-22 Score=203.61 Aligned_cols=164 Identities=21% Similarity=0.289 Sum_probs=127.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC-CC---------------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF-YA---------------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~-~~---------------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|+.. .. ....++.++|++|++.++..++
T Consensus 21 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~tv 100 (250)
T PRK14245 21 GISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNPFPKSI 100 (250)
T ss_pred eeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCccCcccH
Confidence 3899999999999999999999999999986410 00 1134567999999998776555
Q ss_pred ccccccccCCC--C-----CCHHHHHHHHHHccch--------hhHhhCCccccccc-----------------ccCCCC
Q 047286 143 NEGQYIPYGKQ--N-----ASDEHIRPAVQLANAE--------KSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~-----~~~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.+ |+.++.. . ...+++.++++.+++. .....||+|+.+++ +|++||
T Consensus 101 ~~--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD 178 (250)
T PRK14245 101 FE--NVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALD 178 (250)
T ss_pred HH--HHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 54 5544211 1 1123456777777653 33567899998877 399999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGA 250 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~ 250 (632)
+.+++.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++.+++...
T Consensus 179 ~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~~~~~~ 239 (250)
T PRK14245 179 PISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFTNPEKE 239 (250)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhcCCCCh
Confidence 9999999999999877889999999999885 59999999999999999999997654433
No 170
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=3.3e-22 Score=203.56 Aligned_cols=165 Identities=25% Similarity=0.360 Sum_probs=127.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----------------------CcHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----------------------APEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----------------------~~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|.|+... ++...++.++|++|++.+|..++
T Consensus 31 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~tv 110 (269)
T PRK14259 31 NVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNPFPKSI 110 (269)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCccchhhH
Confidence 39999999999999999999999999999875320 11234567999999998776555
Q ss_pred ccccccccCCC--CC---CHHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCCHH
Q 047286 143 NEGQYIPYGKQ--NA---SDEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVDAQ 192 (632)
Q Consensus 143 ~~~~~i~~~~~--~~---~~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD~~ 192 (632)
.+ |+.++.. .. ..+++.++++.+++ +....+||.|++++++ |++||+.
T Consensus 111 ~e--nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~ 188 (269)
T PRK14259 111 YE--NIAFGARINGYTGDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPI 188 (269)
T ss_pred HH--HHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 55 5654321 11 13445566666654 3345678999988773 9999999
Q ss_pred HHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeC-----------CeEEEecChhHHhcCCCcHH
Q 047286 193 SERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSK-----------GKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 193 ~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~-----------G~i~~~g~~~el~~~~~~~~ 251 (632)
+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++ |++++.|+++++...+...|
T Consensus 189 ~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~ 259 (269)
T PRK14259 189 STLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLVEFNETKKIFNSPKQKA 259 (269)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEEEeCCHHHHHhCcCChH
Confidence 999999999998777899999999988854 999999996 67899999999977654444
No 171
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=2.2e-22 Score=203.06 Aligned_cols=164 Identities=21% Similarity=0.362 Sum_probs=128.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc----------------------HHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP----------------------EAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~----------------------~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|.|+..+.| ...++.++|++|++.+|..++
T Consensus 23 ~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv 102 (251)
T PRK14244 23 DINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNPFPKSI 102 (251)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcccccCCH
Confidence 3999999999999999999999999999987642100 023567999999998777665
Q ss_pred ccccccccCC--CC------CCHHHHHHHHHHccchh--------hHhhCCccccccc-----------------ccCCC
Q 047286 143 NEGQYIPYGK--QN------ASDEHIRPAVQLANAEK--------SIDKLPLGLDTVV-----------------ATNAV 189 (632)
Q Consensus 143 ~~~~~i~~~~--~~------~~~~~~~~~~~~~~l~~--------~i~~l~~g~~~~v-----------------~ts~L 189 (632)
.+ |+.++. .. ...+++.++++..++.+ ....||+|..+++ +|++|
T Consensus 103 ~~--ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~L 180 (251)
T PRK14244 103 YD--NVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSAL 180 (251)
T ss_pred HH--HHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 55 554431 11 11234566777777643 3567889988877 39999
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcH
Q 047286 190 DAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGA 250 (632)
Q Consensus 190 D~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~ 250 (632)
|+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+.+...
T Consensus 181 D~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~ 242 (251)
T PRK14244 181 DPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFKNPQSS 242 (251)
T ss_pred CHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhcCCCCh
Confidence 999999999999998778999999999998865 9999999999999999999987664443
No 172
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=2e-22 Score=206.99 Aligned_cols=160 Identities=24% Similarity=0.344 Sum_probs=126.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------------cHHhhcceEEEcccC--cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------------PEAEQEKIGLVSKEP--IFLFCDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------------~~~~r~~i~~v~Q~~--~~~~~~~~ 143 (632)
.+||+|++||+++|+||||||||||+++|.|+.... ....++.++||+|+| .+|..++.
T Consensus 24 ~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~ 103 (288)
T PRK13643 24 DIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFEETVL 103 (288)
T ss_pred eeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHHHHhhEEEEecCcchhcccchHH
Confidence 499999999999999999999999999998653210 123567899999987 56665665
Q ss_pred cccccccCCCC--CC----HHHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCCHHHHH
Q 047286 144 EGQYIPYGKQN--AS----DEHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVDAQSER 195 (632)
Q Consensus 144 ~~~~i~~~~~~--~~----~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~ 195 (632)
+ |+.++... .. .+++.++++..++. ..+..||+|..++++ |++||+.+++
T Consensus 104 ~--~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~ 181 (288)
T PRK13643 104 K--DVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARI 181 (288)
T ss_pred H--HHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHH
Confidence 5 66654321 12 23466777777763 335678889888773 9999999999
Q ss_pred HHHHHHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 196 IVQAAMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 196 ~i~~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+.+.|+++. ++.|+|++||+++.+. .||+|++|++|+++++|+++++...
T Consensus 182 ~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 182 EMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999885 4789999999999875 5999999999999999999998653
No 173
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=99.88 E-value=2.8e-22 Score=203.95 Aligned_cols=161 Identities=22% Similarity=0.328 Sum_probs=127.4
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-----C-----------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-----A-----------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-----~-----------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||+|++|++++|+||||||||||+++|.|+... . +..+++.++|++|++.+|..++.
T Consensus 38 isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv~ 117 (267)
T PRK14235 38 VDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPFPKSIY 117 (267)
T ss_pred EEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCCCCcHH
Confidence 9999999999999999999999999999875321 0 11245679999999987765655
Q ss_pred cccccccCCC--C------CCHHHHHHHHHHccchh--------hHhhCCcccccccc-----------------cCCCC
Q 047286 144 EGQYIPYGKQ--N------ASDEHIRPAVQLANAEK--------SIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 144 ~~~~i~~~~~--~------~~~~~~~~~~~~~~l~~--------~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
+ |+.++.. . ...+++.++++.+++.+ ....||+|..++++ |++||
T Consensus 118 e--nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD 195 (267)
T PRK14235 118 E--NVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALD 195 (267)
T ss_pred H--HHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCC
Confidence 4 5654311 1 11344567777777632 35678999988873 99999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++...+.
T Consensus 196 ~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 254 (267)
T PRK14235 196 PIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKMFTNPD 254 (267)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhCCC
Confidence 99999999999998777899999999998855 99999999999999999999875433
No 174
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=99.88 E-value=2.1e-22 Score=201.39 Aligned_cols=160 Identities=19% Similarity=0.312 Sum_probs=124.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH-hhcceEEEcccCccccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA-EQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~-~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
.+||++++|++++|+||||||||||+++|.|+.... +.. .+..++|++|++.++.. ++.+ |
T Consensus 18 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~--~ 95 (236)
T cd03219 18 DVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVLE--N 95 (236)
T ss_pred CceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHHH--H
Confidence 389999999999999999999999999998653211 111 24569999999876654 5554 5
Q ss_pred cccCCCC----------------CCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCC
Q 047286 148 IPYGKQN----------------ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 148 i~~~~~~----------------~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
+.++... ...+++.++++..++.+ .+.+||+|+.+++ +|++||
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD 175 (236)
T cd03219 96 VMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLN 175 (236)
T ss_pred HHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 5443110 01234566777777643 4667999998887 399999
Q ss_pred HHHHHHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 191 AQSERIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 176 ~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 176 PEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 999999999999886 57899999999998865 999999999999999999988643
No 175
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=1.9e-22 Score=214.04 Aligned_cols=166 Identities=24% Similarity=0.351 Sum_probs=129.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH----hhcceEEEcccCcccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA----EQEKIGLVSKEPIFLF-CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~----~r~~i~~v~Q~~~~~~-~~~~~ 144 (632)
.+||+|++||+++|+||||||||||+++|.|+.... +.. .+++++|++|++.+|. .++.+
T Consensus 46 ~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~e 125 (400)
T PRK10070 46 DASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLD 125 (400)
T ss_pred eEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHH
Confidence 399999999999999999999999999998653211 111 1357999999998765 35555
Q ss_pred ccccccCCC--CC----CHHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHHH
Q 047286 145 GQYIPYGKQ--NA----SDEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~~--~~----~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~i 197 (632)
|+.++.. .. ..+++.++++.+++.+. ..+||+|++++++ |++||+.+++.+
T Consensus 126 --nl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l 203 (400)
T PRK10070 126 --NTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEM 203 (400)
T ss_pred --HHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHH
Confidence 6655321 11 13456778888887544 5668889888873 999999999999
Q ss_pred HHHHHHHh--CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 198 QAAMVKLV--TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 198 ~~~l~~~~--~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
++.|+++. .++|+|++||+++.+. .||+|++|++|++++.|+++++...+...|.
T Consensus 204 ~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v 261 (400)
T PRK10070 204 QDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYV 261 (400)
T ss_pred HHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHH
Confidence 99999885 3789999999998875 5999999999999999999999876555443
No 176
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=2.9e-22 Score=204.18 Aligned_cols=163 Identities=19% Similarity=0.255 Sum_probs=126.3
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC-----C--C---------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRF-----Y--A---------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~-----~--~---------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||++++||+++|+||||||||||+++|.|+.. . . ....++.++|++|++.+|..++.
T Consensus 40 vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv~ 119 (268)
T PRK14248 40 ISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNPFPKSIY 119 (268)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCccCcccHH
Confidence 999999999999999999999999999987521 0 0 01235679999999987776655
Q ss_pred cccccccCC---CC-C---CHHHHHHHHHHccc--------hhhHhhCCccccccc-----------------ccCCCCH
Q 047286 144 EGQYIPYGK---QN-A---SDEHIRPAVQLANA--------EKSIDKLPLGLDTVV-----------------ATNAVDA 191 (632)
Q Consensus 144 ~~~~i~~~~---~~-~---~~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v-----------------~ts~LD~ 191 (632)
+ |+.++. .. . .++.+.++++..++ +..+..||+|+.+++ +|++||+
T Consensus 120 e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~ 197 (268)
T PRK14248 120 N--NITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDP 197 (268)
T ss_pred H--HHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCH
Confidence 5 554321 11 1 12345556666654 234567899998877 3999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcH
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGA 250 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~ 250 (632)
.+++.+.+.|+++.++.|+|++||+++.+. .||++++|++|++++.|+++++..++...
T Consensus 198 ~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~ 257 (268)
T PRK14248 198 ISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFTSPKQQ 257 (268)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCh
Confidence 999999999999876789999999999875 59999999999999999999987654433
No 177
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=2.7e-22 Score=202.71 Aligned_cols=162 Identities=22% Similarity=0.339 Sum_probs=125.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------cHHhhcceEEEcccCccccc-c
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------PEAEQEKIGLVSKEPIFLFC-D 141 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------~~~~r~~i~~v~Q~~~~~~~-~ 141 (632)
.+||++++||+++|+||||||||||+++|.|+.... +..+++.++|++|++.+|.. +
T Consensus 22 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~t 101 (253)
T PRK14267 22 GVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPFPHLT 101 (253)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccCCCCc
Confidence 399999999999999999999999999998763210 11245679999999876643 5
Q ss_pred cccccccccCC--CC--CC----HHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCC
Q 047286 142 FNEGQYIPYGK--QN--AS----DEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNA 188 (632)
Q Consensus 142 ~~~~~~i~~~~--~~--~~----~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~ 188 (632)
+.+ |+.++. .. .. .+++.++++..++ +.....||+|..++++ |++
T Consensus 102 v~e--nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~ 179 (253)
T PRK14267 102 IYD--NVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTAN 179 (253)
T ss_pred HHH--HHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCcc
Confidence 544 554421 11 01 2345666666654 3346778999988773 999
Q ss_pred CCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 189 VDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 189 LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+.
T Consensus 180 LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 240 (253)
T PRK14267 180 IDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVFENPE 240 (253)
T ss_pred CCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhCCC
Confidence 9999999999999998767899999999998764 99999999999999999999876543
No 178
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=3.7e-22 Score=201.35 Aligned_cols=165 Identities=24% Similarity=0.324 Sum_probs=127.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--------------------CcHHhhcceEEEcccCcccc-cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--------------------APEAEQEKIGLVSKEPIFLF-CDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--------------------~~~~~r~~i~~v~Q~~~~~~-~~~~ 143 (632)
.+||++++||+++|+||||||||||+++|.|.... ++..+++.++|++|++.+++ .++.
T Consensus 21 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 100 (250)
T PRK14247 21 GVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPNLSIF 100 (250)
T ss_pred cceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCCCcHH
Confidence 39999999999999999999999999999876321 01234578999999986443 3554
Q ss_pred cccccccCCC--C--CC----HHHHHHHHHHccch--------hhHhhCCcccccccc-----------------cCCCC
Q 047286 144 EGQYIPYGKQ--N--AS----DEHIRPAVQLANAE--------KSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 144 ~~~~i~~~~~--~--~~----~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
+ |+.++.. . .. .+++.++++.+++. ..+.+||+|+.++++ |++||
T Consensus 101 e--nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD 178 (250)
T PRK14247 101 E--NVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLD 178 (250)
T ss_pred H--HHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCC
Confidence 4 5544311 0 11 24566777777653 345778999988873 99999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.+++.+.+.|+++.++.|+|++||+++.+. .||++++|++|++++.|+++++.+.+...+
T Consensus 179 ~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 240 (250)
T PRK14247 179 PENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFTNPRHEL 240 (250)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHcCCccHH
Confidence 9999999999999877889999999999885 599999999999999999999876544333
No 179
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=99.88 E-value=1.9e-22 Score=210.96 Aligned_cols=160 Identities=18% Similarity=0.337 Sum_probs=125.3
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccccccccccccccC
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLFCDFNEGQYIPYG 151 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~ 151 (632)
+||+|++|++++|+||||||||||+++|+|+...+ +...++.+||+||++.++. .++..+|+.+.
T Consensus 60 is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~-~~tv~e~l~~~ 138 (340)
T PRK13536 60 LSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIGVVPQFDNLDL-EFTVRENLLVF 138 (340)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEEEEeCCccCCC-CCcHHHHHHHH
Confidence 99999999999999999999999999998653211 1235678999999987543 33333355431
Q ss_pred C--CCCC----HHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHH
Q 047286 152 K--QNAS----DEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKL 204 (632)
Q Consensus 152 ~--~~~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~ 204 (632)
. .... .+++.++++.+++. ..+..||.|+.+++ +|++||+.+++.+++.|+++
T Consensus 139 ~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l 218 (340)
T PRK13536 139 GRYFGMSTREIEAVIPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSL 218 (340)
T ss_pred HHHcCCCHHHHHHHHHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 1 1111 23455677777764 45778999998887 39999999999999999998
Q ss_pred h-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 205 V-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 205 ~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
. +++|+|++||+++.+.. ||+|++|++|+++..|+++++.+.
T Consensus 219 ~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 219 LARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 5 47899999999999865 999999999999999999998653
No 180
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=1.8e-22 Score=207.29 Aligned_cols=160 Identities=25% Similarity=0.327 Sum_probs=126.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------------cHHhhcceEEEcccC--cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------------PEAEQEKIGLVSKEP--IFLFCDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------------~~~~r~~i~~v~Q~~--~~~~~~~~ 143 (632)
.+||+|++||+++|+||||||||||+++|+|+.... ....++.+||++|+| .+|..++.
T Consensus 25 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~ 104 (286)
T PRK13646 25 DVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVE 104 (286)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhheEEEecChHhccchhhHH
Confidence 399999999999999999999999999998653210 123567899999987 45555665
Q ss_pred cccccccCCC--CCC----HHHHHHHHHHccch-h----hHhhCCcccccccc-----------------cCCCCHHHHH
Q 047286 144 EGQYIPYGKQ--NAS----DEHIRPAVQLANAE-K----SIDKLPLGLDTVVA-----------------TNAVDAQSER 195 (632)
Q Consensus 144 ~~~~i~~~~~--~~~----~~~~~~~~~~~~l~-~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~ 195 (632)
+ |+.++.. ..+ .+++.++++.+++. + ....||+|..++++ |++||+.++.
T Consensus 105 e--~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~ 182 (286)
T PRK13646 105 R--EIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKR 182 (286)
T ss_pred H--HHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHH
Confidence 5 6665421 112 24456777778875 2 35678899888773 9999999999
Q ss_pred HHHHHHHHHh--CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 196 IVQAAMVKLV--TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 196 ~i~~~l~~~~--~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+.+.|+++. .+.|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 183 ~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 183 QVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999985 3789999999999875 5999999999999999999988654
No 181
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=99.88 E-value=4.1e-22 Score=201.10 Aligned_cols=163 Identities=23% Similarity=0.345 Sum_probs=126.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----------------------CcHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----------------------APEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----------------------~~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|.|+... +....++.++|++|++.++..+.
T Consensus 21 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~t~ 100 (250)
T PRK14240 21 KINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPFPMSI 100 (250)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccCcccH
Confidence 39999999999999999999999999999875321 01124667999999988776555
Q ss_pred ccccccccCCC--C-----CCHHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCC
Q 047286 143 NEGQYIPYGKQ--N-----ASDEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~-----~~~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
.+ |+.++.. . ...+++.++++.+++ +.....||.|+.++++ |++||
T Consensus 101 ~~--ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD 178 (250)
T PRK14240 101 YD--NVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALD 178 (250)
T ss_pred HH--HHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 44 5654321 1 112345556666654 2345678999988773 99999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
+.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++...+..
T Consensus 179 ~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~ 238 (250)
T PRK14240 179 PISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLFTNPKD 238 (250)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhCCCC
Confidence 99999999999998778899999999998765 999999999999999999998765433
No 182
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=99.88 E-value=2.7e-22 Score=207.41 Aligned_cols=160 Identities=21% Similarity=0.383 Sum_probs=127.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCccccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|+.... +...++.+||++|++.++.. ++.+ |+.
T Consensus 20 ~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv~e--~l~ 97 (301)
T TIGR03522 20 EVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYVRE--YLQ 97 (301)
T ss_pred EeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcHHH--HHH
Confidence 399999999999999999999999999998653211 12356789999999876543 4444 554
Q ss_pred cCCC--CCC----HHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 150 YGKQ--NAS----DEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~~~--~~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+... ... .+++.++++..++. ..+..||.|+.+++ +|++||+.+++.+++.|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~ 177 (301)
T TIGR03522 98 FIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIK 177 (301)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHH
Confidence 3211 111 34567778877764 45678999998887 399999999999999999
Q ss_pred HHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 203 KLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 203 ~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
++.+++|+|++||+++.+.. ||||++|++|+++..|+.+++...
T Consensus 178 ~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 178 NIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 98778999999999998865 999999999999999999998653
No 183
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=3.9e-22 Score=207.12 Aligned_cols=160 Identities=21% Similarity=0.282 Sum_probs=126.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------------C------------------cHHhhcceEEEcc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------------A------------------PEAEQEKIGLVSK 133 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------------~------------------~~~~r~~i~~v~Q 133 (632)
.+||+|++||+++|+||||||||||+++|+|+... . ...++++++||+|
T Consensus 44 ~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q 123 (320)
T PRK13631 44 NISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQ 123 (320)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccccccccccccchHHHHHhcEEEEEE
Confidence 39999999999999999999999999999865211 0 1235678999999
Q ss_pred cC--cccccccccccccccCCC--CCCH----HHHHHHHHHccch-h----hHhhCCcccccccc---------------
Q 047286 134 EP--IFLFCDFNEGQYIPYGKQ--NASD----EHIRPAVQLANAE-K----SIDKLPLGLDTVVA--------------- 185 (632)
Q Consensus 134 ~~--~~~~~~~~~~~~i~~~~~--~~~~----~~~~~~~~~~~l~-~----~i~~l~~g~~~~v~--------------- 185 (632)
+| .+|..++.+ |+.++.. ..+. +++.++++.+++. . ....||+|..++++
T Consensus 124 ~~~~~l~~~tv~e--ni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLD 201 (320)
T PRK13631 124 FPEYQLFKDTIEK--DIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLSGGQKRRVAIAGILAIQPEILIFD 201 (320)
T ss_pred CchhccccchHHH--HHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 98 466666655 6666521 1222 3455667777774 2 35578899988873
Q ss_pred --cCCCCHHHHHHHHHHHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 186 --TNAVDAQSERIVQAAMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 186 --ts~LD~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|++||+.+++.+.+.|.++. ++.|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 202 EPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 202 EPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKTGTPYEIFTD 266 (320)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999875 4789999999999774 5999999999999999999998754
No 184
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=2.2e-22 Score=206.93 Aligned_cols=160 Identities=26% Similarity=0.374 Sum_probs=126.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------------cHHhhcceEEEcccC--cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------------PEAEQEKIGLVSKEP--IFLFCDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------------~~~~r~~i~~v~Q~~--~~~~~~~~ 143 (632)
.+||+|++||+++|+||||||||||+++|+|+.... ....++.++||+|+| .++..++.
T Consensus 25 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~ 104 (290)
T PRK13634 25 DVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLFEETVE 104 (290)
T ss_pred eEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhhhhhHH
Confidence 499999999999999999999999999998653211 113456799999997 45555555
Q ss_pred cccccccCCC--CCC----HHHHHHHHHHccch-h----hHhhCCcccccccc-----------------cCCCCHHHHH
Q 047286 144 EGQYIPYGKQ--NAS----DEHIRPAVQLANAE-K----SIDKLPLGLDTVVA-----------------TNAVDAQSER 195 (632)
Q Consensus 144 ~~~~i~~~~~--~~~----~~~~~~~~~~~~l~-~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~ 195 (632)
+ |+.++.. ..+ .+++.++++.+++. + .+..||+|+.++++ |++||+.++.
T Consensus 105 e--ni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~ 182 (290)
T PRK13634 105 K--DICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRK 182 (290)
T ss_pred H--HHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHH
Confidence 5 6655421 112 23566778888875 2 35678899988773 9999999999
Q ss_pred HHHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 196 IVQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 196 ~i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+.+.|+++.+ +.|+|++||+++.+. .||||++|++|++++.|+++++...
T Consensus 183 ~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 236 (290)
T PRK13634 183 EMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFAD 236 (290)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999853 789999999999875 5999999999999999999988654
No 185
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.88 E-value=2.6e-22 Score=205.41 Aligned_cols=160 Identities=22% Similarity=0.347 Sum_probs=126.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCc--ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPI--FLFCDFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~--~~~~~~~~~~~ 147 (632)
.+||+|++||+++|+||||||||||+++|+|+... .+...++.++|++|+|. ++..++.+ |
T Consensus 25 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e--n 102 (279)
T PRK13650 25 DVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVED--D 102 (279)
T ss_pred eeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHH--H
Confidence 39999999999999999999999999999865321 12235678999999984 33345555 6
Q ss_pred cccCCC--CCC----HHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHHHHHH
Q 047286 148 IPYGKQ--NAS----DEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERIVQAA 200 (632)
Q Consensus 148 i~~~~~--~~~----~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~ 200 (632)
+.++.. ..+ .+++.++++.+++.+. ...||+|+.++++ |++||+.+++.+.+.
T Consensus 103 i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~ 182 (279)
T PRK13650 103 VAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKT 182 (279)
T ss_pred HHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH
Confidence 665422 112 3456778888887654 4567788877773 999999999999999
Q ss_pred HHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 201 MVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 201 l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 183 l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 183 IKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999853 7899999999998878999999999999999999988654
No 186
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=99.88 E-value=4.2e-22 Score=210.27 Aligned_cols=165 Identities=21% Similarity=0.318 Sum_probs=130.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------------cHHhhcceEEEcccCccccc-cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------------PEAEQEKIGLVSKEPIFLFC-DFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------------~~~~r~~i~~v~Q~~~~~~~-~~~~ 144 (632)
.+||++++||+++|+||||||||||+++|.|+...+ ....++.++|++|++.+|.. ++.+
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e 94 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSVRG 94 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcHHH
Confidence 389999999999999999999999999998753211 01235679999999977653 5544
Q ss_pred ccccccCCCCC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHH
Q 047286 145 GQYIPYGKQNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQA 199 (632)
Q Consensus 145 ~~~i~~~~~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~ 199 (632)
|+.++.... ..+++.++++..++.+ .+.+||+|+++++ +|++||+.+++.+.+
T Consensus 95 --nl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~ 172 (354)
T TIGR02142 95 --NLRYGMKRARPSERRISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILP 172 (354)
T ss_pred --HHHHHhhccChhHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHH
Confidence 676543211 1234677888887754 4567899998888 399999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 200 AMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
.|+++.+ +.|+|++||+++.+.. ||++++|++|++++.|+++++...+...|
T Consensus 173 ~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 173 YLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred HHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 9999854 6899999999998865 99999999999999999999987655443
No 187
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.88 E-value=4.7e-22 Score=200.71 Aligned_cols=162 Identities=23% Similarity=0.317 Sum_probs=126.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------C---------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------A---------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------~---------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|+... . ....++.++|++|++.++..++
T Consensus 22 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~tv 101 (251)
T PRK14270 22 DINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPFPMSI 101 (251)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcCCCcH
Confidence 39999999999999999999999999999975321 0 0123567999999998776555
Q ss_pred ccccccccCCC--CC-C----HHHHHHHHHHccch--------hhHhhCCcccccccc-----------------cCCCC
Q 047286 143 NEGQYIPYGKQ--NA-S----DEHIRPAVQLANAE--------KSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~~-~----~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
.+ |+.++.. .. . .+++.++++.+++. .....||.|..++++ |++||
T Consensus 102 ~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD 179 (251)
T PRK14270 102 YD--NVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALD 179 (251)
T ss_pred HH--HHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 54 5654321 11 1 23455677777652 345678889888773 99999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
+.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++...+.
T Consensus 180 ~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 238 (251)
T PRK14270 180 PISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIFLEPQ 238 (251)
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHhcCCC
Confidence 99999999999998767899999999998765 99999999999999999999876543
No 188
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.87 E-value=5.6e-22 Score=200.37 Aligned_cols=167 Identities=22% Similarity=0.315 Sum_probs=128.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|+.... ....++.++|++|++.+|..++
T Consensus 24 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~tv 103 (253)
T PRK14261 24 DITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNPFPKSI 103 (253)
T ss_pred eeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCccCcccH
Confidence 399999999999999999999999999998652210 1123567999999998777665
Q ss_pred ccccccccCCC--C-CC----HHHHHHHHHHccc--------hhhHhhCCccccccc-----------------ccCCCC
Q 047286 143 NEGQYIPYGKQ--N-AS----DEHIRPAVQLANA--------EKSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~-~~----~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.+ |+.++.. . .. .+++.++++.+++ +.....||.|..+++ +|++||
T Consensus 104 ~e--ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD 181 (253)
T PRK14261 104 YE--NVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALD 181 (253)
T ss_pred HH--HHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 55 5655321 1 11 2334555665554 345667899998877 399999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHHH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYSQ 253 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 253 (632)
+.+++.+.+.|+++.+++|+|++||++..+. .||++++|++|++++.|+++++...+...+.+
T Consensus 182 ~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~~ 245 (253)
T PRK14261 182 PIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFENPHEELTE 245 (253)
T ss_pred HHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHhCCCcHHHH
Confidence 9999999999999877789999999999886 59999999999999999999987654444433
No 189
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=99.87 E-value=5.4e-22 Score=196.29 Aligned_cols=152 Identities=28% Similarity=0.449 Sum_probs=119.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|.... .+...++.++|++|++.++..++.+ |+.
T Consensus 22 ~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~e--~l~ 99 (220)
T cd03245 22 NVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFYGTLRD--NIT 99 (220)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCccccchHHH--Hhh
Confidence 39999999999999999999999999999865321 1122456799999999877655554 665
Q ss_pred cCCCCCCHHHHHHHHHHccchhhHh---------------hCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSID---------------KLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i~---------------~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
+.......+++.+.++..++.+..+ .||+|+.+++ +|++||+.+++.+
T Consensus 100 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l 179 (220)
T cd03245 100 LGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERL 179 (220)
T ss_pred cCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHH
Confidence 5433334556677777777766544 5667776666 3999999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEec
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKG 238 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g 238 (632)
.+.|+++.++.|+|++||+++.++.||++++|++|++++.|
T Consensus 180 ~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 180 KERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999987668999999999988779999999999998654
No 190
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.87 E-value=4.4e-22 Score=204.29 Aligned_cols=164 Identities=21% Similarity=0.324 Sum_probs=127.5
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC--C---C-----------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRF--Y---A-----------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--~---~-----------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||+|++||+++|+||||||||||+++|.|+.. . . ...+++.++|++|++.++..++.
T Consensus 58 vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~tv~ 137 (286)
T PRK14275 58 VNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPNPFPKSIF 137 (286)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCCCCCccCHH
Confidence 999999999999999999999999999997521 0 0 01245689999999987766655
Q ss_pred cccccccCCC--CC-C----HHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCCH
Q 047286 144 EGQYIPYGKQ--NA-S----DEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVDA 191 (632)
Q Consensus 144 ~~~~i~~~~~--~~-~----~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD~ 191 (632)
+ |+.++.. .. . .+++.++++..++ +..+..||+|+.++++ |++||+
T Consensus 138 e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~ 215 (286)
T PRK14275 138 D--NIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDP 215 (286)
T ss_pred H--HHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCH
Confidence 5 5654321 11 1 2344556665554 3446789999988773 899999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++...+...+
T Consensus 216 ~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~~~~~~~~ 276 (286)
T PRK14275 216 KATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLFTNPKDRM 276 (286)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCcHH
Confidence 9999999999998777899999999998865 99999999999999999999876544433
No 191
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=99.87 E-value=3e-22 Score=198.09 Aligned_cols=157 Identities=17% Similarity=0.292 Sum_probs=123.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|+.... ....++.++|++|++.++. .++.+ |+.
T Consensus 20 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~--~l~ 97 (220)
T cd03263 20 DLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTVRE--HLR 97 (220)
T ss_pred ceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCHHH--HHH
Confidence 399999999999999999999999999998653211 1234567999999987653 35544 554
Q ss_pred cCC--CCC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 150 YGK--QNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~~--~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+.. ... ..+++.++++..++.+ .+..||.|..+++ +|++||+.+++.+.+.|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~ 177 (220)
T cd03263 98 FYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLIL 177 (220)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHH
Confidence 321 011 1245667777777643 4677899998877 399999999999999999
Q ss_pred HHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 203 KLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 203 ~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
++.++.|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 178 ~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 178 EVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 98777899999999998865 999999999999999988765
No 192
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.87 E-value=5.2e-22 Score=199.25 Aligned_cols=161 Identities=24% Similarity=0.332 Sum_probs=125.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLF-CDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i 148 (632)
.+||+|++|++++|+||||||||||+++|.|.... ++...++.++|++|++.++. .++.+ |+
T Consensus 19 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--~l 96 (242)
T cd03295 19 NLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEE--NI 96 (242)
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHH--HH
Confidence 39999999999999999999999999999865321 11234567999999987664 45555 55
Q ss_pred ccCCC--CC----CHHHHHHHHHHccch------hhHhhCCccccccc-----------------ccCCCCHHHHHHHHH
Q 047286 149 PYGKQ--NA----SDEHIRPAVQLANAE------KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQA 199 (632)
Q Consensus 149 ~~~~~--~~----~~~~~~~~~~~~~l~------~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~ 199 (632)
.+... .. ..+++.++++..++. ..+.+||.|+.+++ +|++||+.+++.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~ 176 (242)
T cd03295 97 ALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQE 176 (242)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHH
Confidence 44311 11 134566777777665 23567999998887 399999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCC
Q 047286 200 AMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++.+..
T Consensus 177 ~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 227 (242)
T cd03295 177 EFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSP 227 (242)
T ss_pred HHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCC
Confidence 9999853 789999999999775 49999999999999999999886543
No 193
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.87 E-value=5.8e-22 Score=200.16 Aligned_cols=165 Identities=20% Similarity=0.310 Sum_probs=128.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------C---------------cHHhhcceEEEcccCcccc-cc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------A---------------PEAEQEKIGLVSKEPIFLF-CD 141 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------~---------------~~~~r~~i~~v~Q~~~~~~-~~ 141 (632)
.+||+|++||+++|+||||||||||+++|.|+..+ . +...++.++|++|++.++. .+
T Consensus 22 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~t 101 (252)
T PRK14256 22 DVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPFPAMS 101 (252)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCCCcCc
Confidence 38999999999999999999999999999976321 0 1124667999999988665 35
Q ss_pred cccccccccCC---CCCC----HHHHHHHHHHccchh--------hHhhCCcccccccc-----------------cCCC
Q 047286 142 FNEGQYIPYGK---QNAS----DEHIRPAVQLANAEK--------SIDKLPLGLDTVVA-----------------TNAV 189 (632)
Q Consensus 142 ~~~~~~i~~~~---~~~~----~~~~~~~~~~~~l~~--------~i~~l~~g~~~~v~-----------------ts~L 189 (632)
+.+ |+.++. .... .+++.++++.+++.. ....||.|+.++++ |++|
T Consensus 102 v~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gL 179 (252)
T PRK14256 102 IYD--NVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASAL 179 (252)
T ss_pred HHH--HHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 555 554321 1111 234566777777532 35678889888773 9999
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 190 DAQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 190 D~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
|+.+++.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++...+...|
T Consensus 180 D~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 242 (252)
T PRK14256 180 DPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKIFTTPEKKQ 242 (252)
T ss_pred CHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhCCCcHH
Confidence 99999999999999977789999999999885 599999999999999999999876655444
No 194
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.87 E-value=1.4e-21 Score=193.49 Aligned_cols=152 Identities=22% Similarity=0.385 Sum_probs=121.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|.... +...+++.++|++|++.++..++.+ |+.
T Consensus 22 ~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~~tv~e--nl~ 99 (221)
T cd03244 22 NISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISIIPQDPVLFSGTIRS--NLD 99 (221)
T ss_pred ceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEEEECCCCccccchHHH--HhC
Confidence 49999999999999999999999999999865321 1123567899999999877766655 565
Q ss_pred cCCCCCCHHHHHHHHHHccchhhHhh---------------CCccccccc-----------------ccCCCCHHHHHHH
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSIDK---------------LPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i~~---------------l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
+.. ....+++.++++..++.+.+.+ ||.|+.+++ +|++||+.+++.+
T Consensus 100 ~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l 178 (221)
T cd03244 100 PFG-EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALI 178 (221)
T ss_pred cCC-CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHH
Confidence 433 2355667777777777766654 444444444 3899999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeEEEecC
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKIVEKGT 239 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~ 239 (632)
.+.|+++.++.|+|++||++..+..||++++|++|++++.|+
T Consensus 179 ~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 179 QKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred HHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999877789999999999988899999999999998875
No 195
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.87 E-value=5.1e-22 Score=202.68 Aligned_cols=157 Identities=20% Similarity=0.343 Sum_probs=123.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccC--cccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEP--IFLFCDFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~--~~~~~~~~~~~~ 147 (632)
.+||+|++||+++|+||||||||||+++|.|+.... ....++.++|++|+| .++..++.+ |
T Consensus 23 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e--~ 100 (274)
T PRK13647 23 GLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVWD--D 100 (274)
T ss_pred eEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHHH--H
Confidence 499999999999999999999999999998653211 123456799999997 345555555 6
Q ss_pred cccCCC--CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHH
Q 047286 148 IPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAA 200 (632)
Q Consensus 148 i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~ 200 (632)
+.++.. ..+ .+++.++++.+++.+ .+..||+|+.++++ |++||+.++..+.+.
T Consensus 101 l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~ 180 (274)
T PRK13647 101 VAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEI 180 (274)
T ss_pred HHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH
Confidence 665421 112 245677788877654 45678889888773 999999999999999
Q ss_pred HHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHH
Q 047286 201 MVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 201 l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el 243 (632)
|+++. ++.|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 181 l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 181 LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99985 4789999999999885 5999999999999999998764
No 196
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=99.87 E-value=5.4e-22 Score=196.59 Aligned_cols=158 Identities=20% Similarity=0.300 Sum_probs=121.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH-hhcceEEEcccCccccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA-EQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~-~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
.+||++++||+++|+||||||||||+++|.|+.... +.. .++.++|++|++.++.. ++.+ |
T Consensus 18 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~--~ 95 (222)
T cd03224 18 GVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEE--N 95 (222)
T ss_pred eeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHHH--H
Confidence 399999999999999999999999999998653211 111 24579999999976653 5554 5
Q ss_pred cccCCCC----CCHHHHHHHHHHc-cc----hhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHH
Q 047286 148 IPYGKQN----ASDEHIRPAVQLA-NA----EKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAM 201 (632)
Q Consensus 148 i~~~~~~----~~~~~~~~~~~~~-~l----~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l 201 (632)
+.+.... ...+++.++++.. ++ +..+.+||+|+.+++ +|++||+.+++.+.+.|
T Consensus 96 l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l 175 (222)
T cd03224 96 LLLGAYARRRAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAI 175 (222)
T ss_pred HHHHhhhcCchhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHH
Confidence 5543211 1123344555554 23 445677999998877 39999999999999999
Q ss_pred HHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHh
Q 047286 202 VKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 202 ~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~ 244 (632)
+++. +++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 176 ~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 176 RELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9886 47899999999998755 9999999999999999888764
No 197
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.87 E-value=4.4e-22 Score=186.15 Aligned_cols=128 Identities=21% Similarity=0.258 Sum_probs=93.2
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h-c---HHHH------------------------
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V-I---YSWI------------------------ 539 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~-~---~~~~------------------------ 539 (632)
.++-+|.-+++++|+||||||||||+++|.++.+|++ + . ...+
T Consensus 20 gi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~ 99 (240)
T COG1126 20 GISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVT 99 (240)
T ss_pred CcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcCeecccccccccchHHHHHH
Confidence 3344677777999999999999999999999988754 0 0 0000
Q ss_pred --------------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 540 --------------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 540 --------------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
...+.+.+... |+.........+|||||+||+|||||+--
T Consensus 100 lap~~v~~~~k~eA~~~A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~ 177 (240)
T COG1126 100 LAPVKVKKLSKAEAREKALELLEKV--GLADKADAYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLD 177 (240)
T ss_pred hhhHHHcCCCHHHHHHHHHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHH
Confidence 00112233322 45445556778999999999999999321
Q ss_pred ------------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhccCCc-hhHHHH
Q 047286 582 ------------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKITDG-TYASLT 626 (632)
Q Consensus 582 ------------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~~~g-~y~~l~ 626 (632)
+++||-....++ ||||++||+|+|+|+|+++++..+++. +-++++
T Consensus 178 vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~~R~~~FL 236 (240)
T COG1126 178 VMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKSERTRQFL 236 (240)
T ss_pred HHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCCHHHHHHH
Confidence 889999888764 999999999999999999999987432 244443
No 198
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.87 E-value=5.8e-22 Score=198.93 Aligned_cols=158 Identities=23% Similarity=0.287 Sum_probs=123.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------C---cHHhhcceEEEcccCcccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------A---PEAEQEKIGLVSKEPIFLF-CDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~---~~~~r~~i~~v~Q~~~~~~-~~~~~~ 145 (632)
.+||++++|++++|+||||||||||+++|.|+... . ....++.++|++|++.+|. .++.+
T Consensus 19 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~- 97 (241)
T cd03256 19 DVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERLSVLE- 97 (241)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccccCcHHH-
Confidence 38999999999999999999999999999865321 0 1124567999999987665 35544
Q ss_pred cccccCCC--------------CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCC
Q 047286 146 QYIPYGKQ--------------NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 146 ~~i~~~~~--------------~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
|+.++.. ....+++.++++..++.+ ...+||+|+.+++ +|++||
T Consensus 98 -~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 176 (241)
T cd03256 98 -NVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAIARALMQQPKLILADEPVASLD 176 (241)
T ss_pred -HHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 5543211 112345667777777754 3567899998887 399999
Q ss_pred HHHHHHHHHHHHHHh--CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHh
Q 047286 191 AQSERIVQAAMVKLV--TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~--~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~ 244 (632)
+.+++.+.+.|+++. .++|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 177 ~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 177 PASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 999999999999985 3789999999999987 59999999999999999988863
No 199
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.87 E-value=6e-22 Score=203.14 Aligned_cols=160 Identities=18% Similarity=0.337 Sum_probs=126.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-----------------cHHhhcceEEEcccC--cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-----------------PEAEQEKIGLVSKEP--IFLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-----------------~~~~r~~i~~v~Q~~--~~~~~~~~~~ 145 (632)
.+||+|++||+++|+||||||||||+++|+|+.... +...++.++|++|++ .++..++.+
T Consensus 24 ~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e- 102 (283)
T PRK13636 24 GININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQ- 102 (283)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhccccHHH-
Confidence 399999999999999999999999999998753211 123567899999997 345556655
Q ss_pred cccccCCC--CCC----HHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHH
Q 047286 146 QYIPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~ 198 (632)
|+.++.. ..+ .+++.++++.+++.+ ....||+|+.++++ |++||+.+++.+.
T Consensus 103 -~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~ 181 (283)
T PRK13636 103 -DVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIM 181 (283)
T ss_pred -HHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHH
Confidence 5654321 112 244677778777754 46778899988773 9999999999999
Q ss_pred HHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 199 AAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 199 ~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.|+++.+ +.|++++||+++.+. .||++++|++|++++.|+++++...
T Consensus 182 ~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 182 KLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99998854 789999999999986 5999999999999999999998653
No 200
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.87 E-value=6.6e-22 Score=201.38 Aligned_cols=166 Identities=26% Similarity=0.376 Sum_probs=127.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHh----hcceEEEcccCcccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAE----QEKIGLVSKEPIFLF-CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~----r~~i~~v~Q~~~~~~-~~~~~ 144 (632)
.+||++++|++++|+||||||||||+++|.|+.... +... +++++|++|++.++. .++.+
T Consensus 42 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e 121 (269)
T cd03294 42 DVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLE 121 (269)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCCcHHH
Confidence 399999999999999999999999999998653211 1111 357999999987664 35544
Q ss_pred ccccccCC--CC----CCHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 145 GQYIPYGK--QN----ASDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~--~~----~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.++. .. ...+++.++++.+++.+. +..||+|+.+++ +|++||+.+++.+
T Consensus 122 --~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l 199 (269)
T cd03294 122 --NVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREM 199 (269)
T ss_pred --HHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHH
Confidence 554421 11 113456778888887654 456788888877 3999999999999
Q ss_pred HHHHHHHh-C-CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 198 QAAMVKLV-T-NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 198 ~~~l~~~~-~-~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
.+.|.++. + ++|+|++||+++.+. .||++++|++|++++.|+++++.+.+...|.
T Consensus 200 ~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~ 257 (269)
T cd03294 200 QDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYV 257 (269)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcHHH
Confidence 99999885 3 789999999999875 4999999999999999999999766544443
No 201
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=99.87 E-value=8.3e-22 Score=200.51 Aligned_cols=160 Identities=23% Similarity=0.297 Sum_probs=126.1
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-----C-----------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-----A-----------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-----~-----------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||++++||+++|+||||||||||+++|.|+... . ....++.++|++|++.+|..++.
T Consensus 39 vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~tv~ 118 (267)
T PRK14237 39 IDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPFAKSIY 118 (267)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCccccccHH
Confidence 9999999999999999999999999999876421 0 01236679999999987776665
Q ss_pred cccccccCCC--C-CC----HHHHHHHHHHccch--------hhHhhCCccccccc-----------------ccCCCCH
Q 047286 144 EGQYIPYGKQ--N-AS----DEHIRPAVQLANAE--------KSIDKLPLGLDTVV-----------------ATNAVDA 191 (632)
Q Consensus 144 ~~~~i~~~~~--~-~~----~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v-----------------~ts~LD~ 191 (632)
+ |+.++.. . .. .+++.++++..++. .....||+|..+++ +|++||+
T Consensus 119 e--ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~ 196 (267)
T PRK14237 119 E--NITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDP 196 (267)
T ss_pred H--HHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 5 6655321 1 11 23455666666653 33567888988877 3999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCC
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
.+++.+.+.|+++.++.|+|++||+++.+. .||++++|++|++++.|+++++...+
T Consensus 197 ~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 253 (267)
T PRK14237 197 ISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIFTNP 253 (267)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCC
Confidence 999999999999877789999999998875 59999999999999999999987643
No 202
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.87 E-value=8.6e-22 Score=198.80 Aligned_cols=163 Identities=22% Similarity=0.326 Sum_probs=126.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++|++++|+||||||||||+++|.|+.... ...+++.++|++|++.++..++
T Consensus 22 ~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~tv 101 (251)
T PRK14249 22 NINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNPFPKSI 101 (251)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCccCcCcH
Confidence 399999999999999999999999999998753211 1134677999999998777666
Q ss_pred ccccccccCCC--CC-C----HHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCC
Q 047286 143 NEGQYIPYGKQ--NA-S----DEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~~-~----~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
.+ |+.++.. .. . .+.+.++++..++ +.....||.|..++++ |++||
T Consensus 102 ~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD 179 (251)
T PRK14249 102 FD--NVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALD 179 (251)
T ss_pred HH--HHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 55 5654321 11 1 2334455555554 3445678889888773 99999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
+.++..+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++...+..
T Consensus 180 ~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 239 (251)
T PRK14249 180 PVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFSRPRD 239 (251)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHhCCCC
Confidence 99999999999998767899999999998865 899999999999999999998765443
No 203
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.87 E-value=9.6e-22 Score=199.20 Aligned_cols=161 Identities=22% Similarity=0.316 Sum_probs=127.1
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC------C----------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY------A----------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~------~----------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||++++||+++|+||||||||||+++|.|+..+ . ...+++.++|++|++.+|..++.
T Consensus 27 vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv~ 106 (261)
T PRK14263 27 SHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPNPFSMSIF 106 (261)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCccccccHH
Confidence 9999999999999999999999999999865321 0 01235679999999987765555
Q ss_pred cccccccCCC-----CCCHHHHHHHHHHccchhh--------HhhCCccccccc-----------------ccCCCCHHH
Q 047286 144 EGQYIPYGKQ-----NASDEHIRPAVQLANAEKS--------IDKLPLGLDTVV-----------------ATNAVDAQS 193 (632)
Q Consensus 144 ~~~~i~~~~~-----~~~~~~~~~~~~~~~l~~~--------i~~l~~g~~~~v-----------------~ts~LD~~~ 193 (632)
+ |+.++.. ....+++.++++..++.+. ...||.|..+++ +|++||+.+
T Consensus 107 e--nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~ 184 (261)
T PRK14263 107 D--NVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIA 184 (261)
T ss_pred H--HHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHH
Confidence 4 6655421 1123456778888776432 346889988777 399999999
Q ss_pred HHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEe--------CCeEEEecChhHHhcCCC
Q 047286 194 ERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVS--------KGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 194 ~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~--------~G~i~~~g~~~el~~~~~ 248 (632)
++.+.+.|+++.++.|+|++||+++.+. .||++++|+ +|++++.|+++++.+.+.
T Consensus 185 ~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~~~~~~~~~ 248 (261)
T PRK14263 185 TRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPTAQIFQNPR 248 (261)
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCHHHHHhCCC
Confidence 9999999999877789999999999875 499999996 899999999999876544
No 204
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=99.87 E-value=6.1e-22 Score=211.58 Aligned_cols=170 Identities=23% Similarity=0.340 Sum_probs=132.2
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-----------------cHHhhcceEEEcccCcc-cccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-----------------PEAEQEKIGLVSKEPIF-LFCDFNEGQY 147 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-----------------~~~~r~~i~~v~Q~~~~-~~~~~~~~~~ 147 (632)
+||++++||++||||+||||||||.++|.|+.... ....|+++-+++|+|.. ++...+..++
T Consensus 310 VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~ 389 (539)
T COG1123 310 VSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDI 389 (539)
T ss_pred eeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHH
Confidence 99999999999999999999999999998653211 11256789999999963 1222222212
Q ss_pred ccc----CCC---CCCHHHHHHHHHHccchh-----hHhhCCcccccccc-----------------cCCCCHHHHHHHH
Q 047286 148 IPY----GKQ---NASDEHIRPAVQLANAEK-----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQ 198 (632)
Q Consensus 148 i~~----~~~---~~~~~~~~~~~~~~~l~~-----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~ 198 (632)
+.. ... ....+++.+.++..++.. +..+||+|+.++++ +|+||+..+..+.
T Consensus 390 i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~Vl 469 (539)
T COG1123 390 LAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVL 469 (539)
T ss_pred HHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHH
Confidence 211 111 112345777788887654 45567789988884 8999999999999
Q ss_pred HHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 199 AAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 199 ~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
+.|+++.+ +.|.++||||+..+++ ||||++|++|+|++.|+.+++++.+.+.|.+..
T Consensus 470 nLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L 529 (539)
T COG1123 470 NLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKL 529 (539)
T ss_pred HHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHH
Confidence 99999864 6899999999999987 999999999999999999999999999998755
No 205
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=99.87 E-value=2.5e-22 Score=181.98 Aligned_cols=106 Identities=29% Similarity=0.443 Sum_probs=83.7
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh--hcH-------------------------HHH--------------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ--VIY-------------------------SWI-------------- 539 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~--~~~-------------------------~~~-------------- 539 (632)
.|+-++.|||+||||||||||++|+.||..|.+ +|. +.+
T Consensus 21 ~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P~L 100 (231)
T COG3840 21 TVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLGLSPGL 100 (231)
T ss_pred eecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcccCCccc
Confidence 455567899999999999999999999988843 000 000
Q ss_pred ---------------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 540 ---------------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 540 ---------------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
..++.+|...|| ..||||||||+||||+++|
T Consensus 101 kL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl 169 (231)
T COG3840 101 KLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRAEML 169 (231)
T ss_pred ccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHH
Confidence 112334444444 4799999999999999776
Q ss_pred --------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 --------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 --------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.++..+ .||+++++++|||+++|.-+++.+.
T Consensus 170 ~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 170 ALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 78999998775 6999999999999999999999986
No 206
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.87 E-value=8.3e-22 Score=199.04 Aligned_cols=165 Identities=24% Similarity=0.345 Sum_probs=127.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------c------HHhhcceEEEcccCc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------P------EAEQEKIGLVSKEPI 136 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------~------~~~r~~i~~v~Q~~~ 136 (632)
.+||++++||+++|+||||||||||+++|.|+.... + ...++.++|++|++.
T Consensus 18 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~ 97 (252)
T TIGR03005 18 GLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVFQSFN 97 (252)
T ss_pred eeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchhHHHHHhhCeEEEecCcc
Confidence 399999999999999999999999999998653210 0 124678999999987
Q ss_pred ccc-cccccccccccCC---CCC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccC
Q 047286 137 FLF-CDFNEGQYIPYGK---QNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATN 187 (632)
Q Consensus 137 ~~~-~~~~~~~~i~~~~---~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts 187 (632)
++. .++.+ |+.++. ... ..+++.++++..++.+ ....||.|..+++ +|+
T Consensus 98 ~~~~~tv~~--nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~ 175 (252)
T TIGR03005 98 LFPHKTVLD--NVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMPAQLSGGQQQRVAIARALAMRPKVMLFDEVTS 175 (252)
T ss_pred cCCCCcHHH--HHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 664 45544 555421 111 1245667777777654 3566888888777 399
Q ss_pred CCCHHHHHHHHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 188 AVDAQSERIVQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 188 ~LD~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+||+.++..+.+.|+++.+ +.|+|++||++..+. .||++++|++|++++.|+++++.+.+...+
T Consensus 176 ~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 176 ALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEIFRQPKEER 242 (252)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCCCcHH
Confidence 9999999999999998853 789999999999885 599999999999999999999876654434
No 207
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=99.87 E-value=1.1e-22 Score=194.38 Aligned_cols=160 Identities=19% Similarity=0.371 Sum_probs=125.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH------------------hhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA------------------EQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~------------------~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
++||++++||+++|+|||||||||++|+|.| +|.|+. .|..|+..+|.+-+|. .++..+
T Consensus 22 ~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG--~~~P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~-~lTVlE 98 (250)
T COG0411 22 DVSLEVRPGEIVGLIGPNGAGKTTLFNLITG--FYKPSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP-GLTVLE 98 (250)
T ss_pred ceeEEEcCCeEEEEECCCCCCceeeeeeecc--cccCCCceEEECCcccCCCCHHHHHhccceeecccccccC-CCcHHH
Confidence 3999999999999999999999999999984 343332 3566888899987654 444444
Q ss_pred ccccCCC------------------CCCHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccC
Q 047286 147 YIPYGKQ------------------NASDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATN 187 (632)
Q Consensus 147 ~i~~~~~------------------~~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts 187 (632)
|+..+.. ....++..+.++.+++.+. ...||.|.+.++ +.+
T Consensus 99 Nv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~LsyG~qR~LEIArALa~~P~lLLLDEPaA 178 (250)
T COG0411 99 NVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAGNLSYGQQRRLEIARALATQPKLLLLDEPAA 178 (250)
T ss_pred HHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhhcCChhHhHHHHHHHHHhcCCCEEEecCccC
Confidence 6654311 1113445667777776544 556888887666 379
Q ss_pred CCCHHHHHHHHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCC
Q 047286 188 AVDAQSERIVQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 188 ~LD~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
|+.+....++.+.|+++++ +.|+++|.||+..+.. ||||+||+.|+++++|+|+|+.++|
T Consensus 179 Gln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~dp 241 (250)
T COG0411 179 GLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRNNP 241 (250)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhcCH
Confidence 9999999999999999975 4899999999998865 9999999999999999999998764
No 208
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.87 E-value=6.6e-22 Score=195.59 Aligned_cols=157 Identities=20% Similarity=0.284 Sum_probs=122.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCccccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|+.... +...++.++|++|++.++.. ++.+ |+.
T Consensus 18 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~l~ 95 (220)
T cd03265 18 GVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGWE--NLY 95 (220)
T ss_pred ceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecCCccccccCcHHH--HHH
Confidence 399999999999999999999999999998753211 12345679999999875542 3333 554
Q ss_pred cCC--CCC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 150 YGK--QNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~~--~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+.. ... ..+++.++++..++.+ .+.+||+|+++++ +|++||+.+++.+.+.|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~ 175 (220)
T cd03265 96 IHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIE 175 (220)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHH
Confidence 321 011 2345677888887754 4567899998877 399999999999999999
Q ss_pred HHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 203 KLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 203 ~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 176 ~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 176 KLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 8753 6899999999998865 999999999999999987764
No 209
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.87 E-value=8.3e-22 Score=201.96 Aligned_cols=160 Identities=23% Similarity=0.356 Sum_probs=125.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC------------------cHHhhcceEEEcccCc--cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA------------------PEAEQEKIGLVSKEPI--FLFCDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~------------------~~~~r~~i~~v~Q~~~--~~~~~~~~ 144 (632)
.+||+|++||+++|+||||||||||+++|+|+.... ....+++++|++|++. ++..++.+
T Consensus 25 ~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e 104 (282)
T PRK13640 25 DISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGATVGD 104 (282)
T ss_pred eEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccCCHHH
Confidence 399999999999999999999999999998653211 1124567999999984 33445544
Q ss_pred ccccccCCC--CCCH----HHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 145 GQYIPYGKQ--NASD----EHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~~--~~~~----~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.++.. ..+. +++.++++.+++.+. ...||+|+.+++ +|++||+.+++.+
T Consensus 105 --nl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l 182 (282)
T PRK13640 105 --DVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQI 182 (282)
T ss_pred --HHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHH
Confidence 6665421 1222 346677888887654 456788888777 3999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+.|+++.+ +.|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 183 ~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 183 LKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999998853 7899999999998888999999999999999999988653
No 210
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.87 E-value=7.4e-22 Score=197.05 Aligned_cols=159 Identities=23% Similarity=0.374 Sum_probs=124.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---HhhcceEEEcccCcccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---AEQEKIGLVSKEPIFLF-CDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~~r~~i~~v~Q~~~~~~-~~~~~~ 145 (632)
.+||++++||+++|+||||||||||+++|.|+.... +. ..++.++|++|++.+|. .++.+
T Consensus 23 ~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e- 101 (233)
T cd03258 23 DVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRTVFE- 101 (233)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCcHHH-
Confidence 389999999999999999999999999998653210 11 13567999999998765 35554
Q ss_pred cccccCC--CCC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 146 QYIPYGK--QNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~--~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.++. ... ..+++.++++..++.+ ....||+|+.+++ +|++||+.+++.+.
T Consensus 102 -~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~ 180 (233)
T cd03258 102 -NVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSIL 180 (233)
T ss_pred -HHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHH
Confidence 554321 111 1345667778777754 3567888988877 39999999999999
Q ss_pred HHHHHHh-C-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 199 AAMVKLV-T-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 199 ~~l~~~~-~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+.|+++. + ++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 181 ~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 181 ALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999885 3 7899999999998865 99999999999999999888754
No 211
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.87 E-value=8.3e-22 Score=198.83 Aligned_cols=165 Identities=21% Similarity=0.350 Sum_probs=126.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------C---------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------A---------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------~---------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|+... . ....++.++|++|++.++..++
T Consensus 21 ~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~tv 100 (250)
T PRK14262 21 NVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPFPMSI 100 (250)
T ss_pred eeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccCcccH
Confidence 39999999999999999999999999999965321 0 0123567999999998776555
Q ss_pred ccccccccCCC---CC----CHHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCC
Q 047286 143 NEGQYIPYGKQ---NA----SDEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~---~~----~~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
.+ |+.++.. .. .++++.++++..++ +..+..||.|..++++ |++||
T Consensus 101 ~e--~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD 178 (250)
T PRK14262 101 YD--NVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALD 178 (250)
T ss_pred HH--HHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccC
Confidence 54 5554211 11 12334556666554 3346778999888773 89999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.+++.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++.+.+...+
T Consensus 179 ~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 240 (250)
T PRK14262 179 PIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVERPKNKL 240 (250)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCCCChH
Confidence 9999999999999877789999999999765 599999999999999999999876543333
No 212
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=99.87 E-value=7e-22 Score=199.25 Aligned_cols=155 Identities=24% Similarity=0.272 Sum_probs=123.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------cHHhhcceEEEcccCcccc-cccccccccccCCC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIPYGKQ 153 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~~~~ 153 (632)
.+||+|++||+++|+||||||||||+++|.|+.... ....++.++|++|++.++. .++.+ |+.++..
T Consensus 30 ~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~l~~~~tv~e--nl~~~~~ 107 (257)
T PRK11247 30 QLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQDARLLPWKKVID--NVGLGLK 107 (257)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEecCccCCCCCcHHH--HHHhccc
Confidence 399999999999999999999999999998653211 1234667999999987654 35554 6655432
Q ss_pred CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh--CCceE
Q 047286 154 NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV--TNQTV 210 (632)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~--~~~tv 210 (632)
....+++.++++..++.+ .+..||+|+.+++ +|++||+.+++.+.+.|+++. .++|+
T Consensus 108 ~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tv 187 (257)
T PRK11247 108 GQWRDAALQALAAVGLADRANEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTV 187 (257)
T ss_pred chHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 223456778888887754 4667889998877 399999999999999999874 36899
Q ss_pred EEEecCchHHh-hcCeEEEEeCCeEEEecChh
Q 047286 211 VIVANCLITIR-NADCIIMVSKGKIVEKGTHD 241 (632)
Q Consensus 211 iiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~ 241 (632)
|++||+++.+. .||+|++|++|+++++++.+
T Consensus 188 iivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 188 LLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999875 59999999999999988765
No 213
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.87 E-value=9.5e-22 Score=198.28 Aligned_cols=162 Identities=23% Similarity=0.334 Sum_probs=125.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------------CcHHhhcceEEEcccCcccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------------APEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------------~~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
.+||++++||+++|+||||||||||+++|.|.... ++...++.++|++|++.+|..++.
T Consensus 21 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~ 100 (249)
T PRK14253 21 SINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPFPMSIY 100 (249)
T ss_pred cceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcCcccHH
Confidence 39999999999999999999999999999865321 112346679999999987765554
Q ss_pred cccccccCCC--CC-C----HHHHHHHHHHccch--------hhHhhCCccccccc-----------------ccCCCCH
Q 047286 144 EGQYIPYGKQ--NA-S----DEHIRPAVQLANAE--------KSIDKLPLGLDTVV-----------------ATNAVDA 191 (632)
Q Consensus 144 ~~~~i~~~~~--~~-~----~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v-----------------~ts~LD~ 191 (632)
+ |+.++.. .. . .+++.++++..++. .....||+|..+++ +|++||+
T Consensus 101 ~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~ 178 (249)
T PRK14253 101 E--NVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDP 178 (249)
T ss_pred H--HHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCH
Confidence 4 5554311 11 1 23345556665543 23456888888777 3999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+.+++...+.
T Consensus 179 ~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 236 (249)
T PRK14253 179 IATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFSNPK 236 (249)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCC
Confidence 9999999999998777899999999998775 99999999999999999998865433
No 214
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=99.87 E-value=7.7e-22 Score=193.21 Aligned_cols=149 Identities=23% Similarity=0.331 Sum_probs=120.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|+... .....++.++|++|++.++..++.+ |+.
T Consensus 26 ~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~tv~~--~l~ 103 (207)
T cd03369 26 NVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSLTIIPQDPTLFSGTIRS--NLD 103 (207)
T ss_pred CceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhEEEEecCCcccCccHHH--Hhc
Confidence 49999999999999999999999999999865321 1123467899999999877766655 565
Q ss_pred cCCCCCCHHHHHHHHHHccchhhHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHhCCceEEE
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLVTNQTVVI 212 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~~~~tvii 212 (632)
+.. ....+++.++++ ++.....||.|..++++ |++||+.+++.+.+.|+++.++.|+|+
T Consensus 104 ~~~-~~~~~~~~~~l~---~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii 179 (207)
T cd03369 104 PFD-EYSDEEIYGALR---VSEGGLNLSQGQRQLLCLARALLKRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILT 179 (207)
T ss_pred ccC-CCCHHHHHHHhh---ccCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 432 234455555554 56677889999988773 899999999999999999877889999
Q ss_pred EecCchHHhhcCeEEEEeCCeEEEecC
Q 047286 213 VANCLITIRNADCIIMVSKGKIVEKGT 239 (632)
Q Consensus 213 itH~~~~~~~aD~i~vl~~G~i~~~g~ 239 (632)
+||+++.+..||++++|++|++++.|+
T Consensus 180 ~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 180 IAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 999999887799999999999998875
No 215
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.87 E-value=6.7e-22 Score=202.25 Aligned_cols=160 Identities=27% Similarity=0.389 Sum_probs=125.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCc--ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPI--FLFCDFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~--~~~~~~~~~~~ 147 (632)
.+||+|++||+++|+||||||||||+++|+|..... ....++.++|++|++. ++..++.+ |
T Consensus 25 ~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e--n 102 (279)
T PRK13635 25 DVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQD--D 102 (279)
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHHH--H
Confidence 399999999999999999999999999998653211 1234667999999983 34445655 5
Q ss_pred cccCCC--CCC----HHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHH
Q 047286 148 IPYGKQ--NAS----DEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAA 200 (632)
Q Consensus 148 i~~~~~--~~~----~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~ 200 (632)
+.++.. ... .+++.++++.+++.+. +..||+|+.+++ +|++||+.+++.+.+.
T Consensus 103 l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~ 182 (279)
T PRK13635 103 VAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLET 182 (279)
T ss_pred HhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 655321 112 2446777888787654 456778887777 3999999999999999
Q ss_pred HHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 201 MVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 201 l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|+++.+ +.|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 183 l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 183 VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999864 6899999999998888999999999999999999988654
No 216
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.87 E-value=8.3e-22 Score=197.87 Aligned_cols=159 Identities=15% Similarity=0.261 Sum_probs=125.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH-HhhcceEEEcccCccccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE-AEQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~-~~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
.+||++++||+++|+||||||||||+++|.|..... +. ..++.++|++|++.++.. ++.+ |
T Consensus 20 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--n 97 (242)
T TIGR03411 20 DLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVFE--N 97 (242)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCHHH--H
Confidence 399999999999999999999999999998653211 11 123569999999877654 5554 4
Q ss_pred cccCCC--------------CCCHHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHH
Q 047286 148 IPYGKQ--------------NASDEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQ 192 (632)
Q Consensus 148 i~~~~~--------------~~~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~ 192 (632)
+.++.. ....+++.++++..++. ..+..||+|..+++ +|++||+.
T Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~ 177 (242)
T TIGR03411 98 LELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDE 177 (242)
T ss_pred HHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHH
Confidence 544211 01234566777777764 34677899998877 39999999
Q ss_pred HHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 193 SERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 193 ~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 178 ~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 178 ETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999998778899999999999865 99999999999999999998864
No 217
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=99.87 E-value=1.2e-21 Score=199.00 Aligned_cols=164 Identities=22% Similarity=0.330 Sum_probs=126.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----------------------CcHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----------------------APEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----------------------~~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||+|++||+++|+||||||||||+++|.|+... .+...+++++|++|++.++..++
T Consensus 28 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv 107 (264)
T PRK14243 28 NVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVEVRRRIGMVFQKPNPFPKSI 107 (264)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHHHhhhEEEEccCCccccccH
Confidence 39999999999999999999999999999865210 01224667999999998776555
Q ss_pred ccccccccCCC--C---CCHHHHHHHHHHccch--------hhHhhCCccccccc-----------------ccCCCCHH
Q 047286 143 NEGQYIPYGKQ--N---ASDEHIRPAVQLANAE--------KSIDKLPLGLDTVV-----------------ATNAVDAQ 192 (632)
Q Consensus 143 ~~~~~i~~~~~--~---~~~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v-----------------~ts~LD~~ 192 (632)
.+ |+.++.. . ...+++.++++.+++. ....+||+|..+++ +|++||+.
T Consensus 108 ~e--nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~ 185 (264)
T PRK14243 108 YD--NIAYGARINGYKGDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPI 185 (264)
T ss_pred HH--HHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHH
Confidence 54 5654321 1 1123445556665542 23556889988877 39999999
Q ss_pred HHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEe---------CCeEEEecChhHHhcCCCcH
Q 047286 193 SERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVS---------KGKIVEKGTHDELIEDPEGA 250 (632)
Q Consensus 193 ~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~---------~G~i~~~g~~~el~~~~~~~ 250 (632)
+++.+.+.|.++.++.|+|++||+++.+.. ||++++|+ +|++++.|+++++.+.+...
T Consensus 186 ~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~ 253 (264)
T PRK14243 186 STLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDRTEKIFNSPQQQ 253 (264)
T ss_pred HHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCCHHHHHhCCCcH
Confidence 999999999998777899999999998765 99999998 89999999999997664443
No 218
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.87 E-value=6.6e-22 Score=201.86 Aligned_cols=160 Identities=26% Similarity=0.388 Sum_probs=125.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------C-cHHhhcceEEEcccCc--cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------A-PEAEQEKIGLVSKEPI--FLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~-~~~~r~~i~~v~Q~~~--~~~~~~~~~~ 146 (632)
.+||+|++||+++|+||||||||||+++|+|+... . ....++.++|++|+|. ++..++.+
T Consensus 20 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e-- 97 (274)
T PRK13644 20 NINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVEE-- 97 (274)
T ss_pred eeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHHH--
Confidence 49999999999999999999999999999875321 0 1234567999999985 33445554
Q ss_pred ccccCCCC--CC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHH
Q 047286 147 YIPYGKQN--AS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQA 199 (632)
Q Consensus 147 ~i~~~~~~--~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~ 199 (632)
|+.++... .+ .+++.++++..++.+ .+..||+|+.+++ +|++||+.++..+++
T Consensus 98 nl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~ 177 (274)
T PRK13644 98 DLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLE 177 (274)
T ss_pred HHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH
Confidence 56554211 12 344667777777754 4566888988877 399999999999999
Q ss_pred HHHHHh-CCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 200 AMVKLV-TNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 200 ~l~~~~-~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.++++. ++.|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 178 ~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 178 RIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999885 47899999999999888999999999999999999988654
No 219
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=99.87 E-value=7.8e-22 Score=198.22 Aligned_cols=157 Identities=22% Similarity=0.296 Sum_probs=122.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c---HHhhcceEEEcccCcccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P---EAEQEKIGLVSKEPIFLF-CDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~---~~~r~~i~~v~Q~~~~~~-~~~~~~ 145 (632)
.+||++++|++++|+||||||||||+++|.|+.... + ...++.++|++|++.++. .++.+
T Consensus 20 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~- 98 (243)
T TIGR02315 20 NINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLTVLE- 98 (243)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccccccHHH-
Confidence 399999999999999999999999999998653210 0 124667999999987664 35544
Q ss_pred cccccCCC--------------CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCC
Q 047286 146 QYIPYGKQ--------------NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 146 ~~i~~~~~--------------~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
|+.++.. ....+++.++++..++.+ ....||+|+.+++ +|++||
T Consensus 99 -~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD 177 (243)
T TIGR02315 99 -NVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIARALAQQPDLILADEPIASLD 177 (243)
T ss_pred -HHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 5543211 112345667777777654 3567889998877 399999
Q ss_pred HHHHHHHHHHHHHHh-C-CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHH
Q 047286 191 AQSERIVQAAMVKLV-T-NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~-~-~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el 243 (632)
+.+++.+.+.|+++. + ++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 178 ~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 178 PKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 999999999999885 3 689999999999885 5999999999999999998886
No 220
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=99.87 E-value=1.1e-21 Score=200.26 Aligned_cols=161 Identities=24% Similarity=0.338 Sum_probs=126.3
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------C---------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------A---------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------~---------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||+|++||+++|+||||||||||+++|.|.... . ....++.++|++|++.+|..++.
T Consensus 44 vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~tv~ 123 (272)
T PRK14236 44 ISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPFPKSIY 123 (272)
T ss_pred EEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccCcccHH
Confidence 9999999999999999999999999999876321 0 11246789999999987766655
Q ss_pred cccccccCC--CC--C---CHHHHHHHHHHccch--------hhHhhCCcccccccc-----------------cCCCCH
Q 047286 144 EGQYIPYGK--QN--A---SDEHIRPAVQLANAE--------KSIDKLPLGLDTVVA-----------------TNAVDA 191 (632)
Q Consensus 144 ~~~~i~~~~--~~--~---~~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v~-----------------ts~LD~ 191 (632)
+ |+.++. .. . ..+++.++++.+++. .....||+|..++++ |++||+
T Consensus 124 e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~ 201 (272)
T PRK14236 124 E--NVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDP 201 (272)
T ss_pred H--HHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCH
Confidence 5 555431 11 1 123456667766653 335678899888773 999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCC
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPE 248 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~ 248 (632)
.+++.+.+.|+++.++.|+|++||+++.+. .||++++|++|++++.|+++++...+.
T Consensus 202 ~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 259 (272)
T PRK14236 202 ISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTLFTSPA 259 (272)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHHhcCCC
Confidence 999999999999877789999999999875 599999999999999999999875533
No 221
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.87 E-value=1.3e-21 Score=198.06 Aligned_cols=161 Identities=20% Similarity=0.263 Sum_probs=125.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------------cHHhhcceEEEcccCc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------------PEAEQEKIGLVSKEPI 136 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------------~~~~r~~i~~v~Q~~~ 136 (632)
.+||++++||+++|+||||||||||+++|.|..... ....++.++|++|++.
T Consensus 23 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~ 102 (257)
T PRK10619 23 GVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN 102 (257)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccccchHHHHHhhceEEEecCcc
Confidence 399999999999999999999999999998653211 0123567999999997
Q ss_pred cccc-ccccccccccCC---CCC----CHHHHHHHHHHccchhh-----HhhCCccccccc-----------------cc
Q 047286 137 FLFC-DFNEGQYIPYGK---QNA----SDEHIRPAVQLANAEKS-----IDKLPLGLDTVV-----------------AT 186 (632)
Q Consensus 137 ~~~~-~~~~~~~i~~~~---~~~----~~~~~~~~~~~~~l~~~-----i~~l~~g~~~~v-----------------~t 186 (632)
++.. ++.+ |+.++. ... ..+++.++++..++.+. ...||+|..+++ +|
T Consensus 103 l~~~~sv~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt 180 (257)
T PRK10619 103 LWSHMTVLE--NVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPT 180 (257)
T ss_pred cCCCCcHHH--HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 6643 4444 554321 111 13456677777776543 467889988877 39
Q ss_pred CCCCHHHHHHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCC
Q 047286 187 NAVDAQSERIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 187 s~LD~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
++||+.+++.+.+.|+++. +++|+|++||++..+.. ||+|++|++|++++.|+++++...+
T Consensus 181 ~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 243 (257)
T PRK10619 181 SALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQLFGNP 243 (257)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhhhCc
Confidence 9999999999999999985 47899999999999875 9999999999999999999986543
No 222
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=99.87 E-value=1.2e-21 Score=199.63 Aligned_cols=161 Identities=17% Similarity=0.255 Sum_probs=124.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c---HHhhcceEEEcccCccccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P---EAEQEKIGLVSKEPIFLFC-DFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~---~~~r~~i~~v~Q~~~~~~~-~~~~~ 145 (632)
.+||+|++|++++|+||||||||||+++|.|+.... + ...++.++|++|++.++.. ++.+
T Consensus 25 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e- 103 (269)
T PRK11831 25 NISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFD- 103 (269)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCCHHH-
Confidence 399999999999999999999999999998653211 1 0135679999999876653 5544
Q ss_pred cccccCC---CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 146 QYIPYGK---QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 146 ~~i~~~~---~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.++. ...+ .+++.++++..++.+ .+..||+|+.+++ +|++||+.+++.+
T Consensus 104 -nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l 182 (269)
T PRK11831 104 -NVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVL 182 (269)
T ss_pred -HHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHH
Confidence 554321 1111 234556677777653 4677999998877 3999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCC
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
.+.|+++.+ +.|+|++||++..+.. ||++++|++|++++.|+++++.+.+
T Consensus 183 ~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 235 (269)
T PRK11831 183 VKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANP 235 (269)
T ss_pred HHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCC
Confidence 999999853 6899999999988865 9999999999999999999987653
No 223
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=99.87 E-value=1.1e-21 Score=198.07 Aligned_cols=165 Identities=25% Similarity=0.325 Sum_probs=127.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-----------------------cHHhhcceEEEcccCcccc-c
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-----------------------PEAEQEKIGLVSKEPIFLF-C 140 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-----------------------~~~~r~~i~~v~Q~~~~~~-~ 140 (632)
.+||++++|++++|+||||||||||+++|.|..... +...++.++|++|++.++. .
T Consensus 21 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (250)
T PRK11264 21 GIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHR 100 (250)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcccCCCC
Confidence 399999999999999999999999999998653210 0224568999999987664 3
Q ss_pred ccccccccccCC---CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHH
Q 047286 141 DFNEGQYIPYGK---QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQ 192 (632)
Q Consensus 141 ~~~~~~~i~~~~---~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~ 192 (632)
++.+ |+.++. .... .+++.++++..++.+ ...+||+|+.+++ +|++||+.
T Consensus 101 tv~e--~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~ 178 (250)
T PRK11264 101 TVLE--NIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPE 178 (250)
T ss_pred CHHH--HHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHH
Confidence 5555 554321 1111 234566677777643 4677999998887 39999999
Q ss_pred HHHHHHHHHHHHhC-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 193 SERIVQAAMVKLVT-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 193 ~~~~i~~~l~~~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+++.+.+.|+++.+ +.|+|++||++..+.. ||++++|++|++++.|+++++...+...+
T Consensus 179 ~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 239 (250)
T PRK11264 179 LVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFADPQQPR 239 (250)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCCCCHH
Confidence 99999999998864 7899999999998865 99999999999999999999876544333
No 224
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=99.87 E-value=8.2e-22 Score=204.11 Aligned_cols=160 Identities=17% Similarity=0.288 Sum_probs=124.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~ 149 (632)
.+||+|++|++++|+||||||||||+++|.|+.... +...++.++|++|++.++. .++.+ |+.
T Consensus 22 ~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e--~l~ 99 (303)
T TIGR01288 22 DLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTVRE--NLL 99 (303)
T ss_pred ceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcHHH--HHH
Confidence 399999999999999999999999999998753211 1224678999999987653 34444 554
Q ss_pred cC-C-CCCC----HHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 150 YG-K-QNAS----DEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~-~-~~~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+. . ...+ .+++.++++.+++. ..+..||+|+++++ +|++||+.+++.+.+.|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~ 179 (303)
T TIGR01288 100 VFGRYFGMSTREIEAVIPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLR 179 (303)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHH
Confidence 21 1 1112 23455667777764 45678999998887 399999999999999999
Q ss_pred HHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 203 KLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 203 ~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
++. ++.|+|++||+++.+.. ||++++|++|+++..|+++++...
T Consensus 180 ~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 180 SLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 985 47899999999998865 999999999999999999998643
No 225
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.87 E-value=1.7e-21 Score=198.86 Aligned_cols=162 Identities=21% Similarity=0.336 Sum_probs=125.8
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||+|++||+++|+||||||||||+++|.|+.... ....++.++|++|++.++..++.
T Consensus 39 vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~tv~ 118 (274)
T PRK14265 39 VHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRPNPFPKSIY 118 (274)
T ss_pred eeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCCccccccHH
Confidence 99999999999999999999999999998753210 11246789999999987765554
Q ss_pred cccccccCCCC-----CCHHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCCHHH
Q 047286 144 EGQYIPYGKQN-----ASDEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVDAQS 193 (632)
Q Consensus 144 ~~~~i~~~~~~-----~~~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD~~~ 193 (632)
+ |+.++... ..++.+.++++.+++ +.....||+|..++++ |++||+.+
T Consensus 119 ~--nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~ 196 (274)
T PRK14265 119 E--NIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPIS 196 (274)
T ss_pred H--HHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHH
Confidence 4 56543210 112334556666654 2334568889888773 99999999
Q ss_pred HHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEe---------CCeEEEecChhHHhcCCCc
Q 047286 194 ERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVS---------KGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 194 ~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~---------~G~i~~~g~~~el~~~~~~ 249 (632)
++.+.+.|+++.++.|+|++||+++.+.. ||++++|+ +|++++.|+++++...+..
T Consensus 197 ~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g~~~~~~~~~~~ 262 (274)
T PRK14265 197 TRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEFSPTEQMFGSPQT 262 (274)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEeCCHHHHHhCCCC
Confidence 99999999998777899999999998864 99999998 8999999999998765443
No 226
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.87 E-value=9.4e-22 Score=192.31 Aligned_cols=149 Identities=17% Similarity=0.292 Sum_probs=117.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc------------HHhhcceEEEcccCc--cccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP------------EAEQEKIGLVSKEPI--FLFCDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~------------~~~r~~i~~v~Q~~~--~~~~~~~~~~~i~~ 150 (632)
.+||++++||+++|+||||||||||+++|.|+..... ...++.++|++|++. ++..++.+ |+.+
T Consensus 18 ~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e--~l~~ 95 (205)
T cd03226 18 DLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVRE--ELLL 95 (205)
T ss_pred eeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHHH--HHhh
Confidence 3999999999999999999999999999986532110 123567999999973 34455555 5655
Q ss_pred CCC--CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-C
Q 047286 151 GKQ--NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-T 206 (632)
Q Consensus 151 ~~~--~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~ 206 (632)
+.. ....+++.++++.+++.+ .+..||+|+++++ +|++||+.+++.+.+.|+++. +
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~ 175 (205)
T cd03226 96 GLKELDAGNEQAETVLKDLDLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQ 175 (205)
T ss_pred hhhhcCccHHHHHHHHHHcCCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHC
Confidence 422 122356788888888754 4567888988877 399999999999999999884 5
Q ss_pred CceEEEEecCchHHhh-cCeEEEEeCCeEE
Q 047286 207 NQTVVIVANCLITIRN-ADCIIMVSKGKIV 235 (632)
Q Consensus 207 ~~tviiitH~~~~~~~-aD~i~vl~~G~i~ 235 (632)
+.|+|++||+++.+.. ||++++|++|+++
T Consensus 176 ~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 176 GKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 7899999999998865 9999999999975
No 227
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.87 E-value=1.2e-21 Score=195.11 Aligned_cols=167 Identities=23% Similarity=0.259 Sum_probs=125.8
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----CcH------------Hh-hcceEEEcccCc-ccccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----APE------------AE-QEKIGLVSKEPI-FLFCDFNEGQY 147 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----~~~------------~~-r~~i~~v~Q~~~-~~~~~~~~~~~ 147 (632)
+||++++|++++|+||||||||||+++|+|+... ... .. ++.++|++|++. .|+...+..+|
T Consensus 5 vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t~~~~ 84 (230)
T TIGR02770 5 LNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFTMGNH 84 (230)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccCHHHH
Confidence 8999999999999999999999999999976432 111 11 357999999984 34433322223
Q ss_pred ccc-----CCCC-CCHHHHHHHHHHccch-------hhHhhCCcccccccc-----------------cCCCCHHHHHHH
Q 047286 148 IPY-----GKQN-ASDEHIRPAVQLANAE-------KSIDKLPLGLDTVVA-----------------TNAVDAQSERIV 197 (632)
Q Consensus 148 i~~-----~~~~-~~~~~~~~~~~~~~l~-------~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i 197 (632)
+.+ +... ...+++.++++.+++. ..+..||+|.+++++ |++||+.+++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l 164 (230)
T TIGR02770 85 AIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARV 164 (230)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHH
Confidence 321 1111 1234567788887775 346679999988773 999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
.+.|+++.+ ++|+|++||+++.+. .||++++|++|++++.|+++++...+...+.
T Consensus 165 ~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 222 (230)
T TIGR02770 165 LKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETT 222 (230)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHH
Confidence 999998853 689999999999886 4999999999999999999999765444443
No 228
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.86 E-value=1.4e-21 Score=198.75 Aligned_cols=167 Identities=19% Similarity=0.225 Sum_probs=126.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---HhhcceEEEcccCc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---AEQEKIGLVSKEPI-FLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~~r~~i~~v~Q~~~-~~~~~~~~~ 145 (632)
.+||+|++||+++|+||||||||||+++|.|+.... .. ..++.++|++|++. .++...+..
T Consensus 29 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~ 108 (265)
T TIGR02769 29 NVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVR 108 (265)
T ss_pred CceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCCCCCHH
Confidence 399999999999999999999999999998653211 11 13567999999973 233323333
Q ss_pred cccccCC-------CCCCHHHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCCHHHHHH
Q 047286 146 QYIPYGK-------QNASDEHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVDAQSERI 196 (632)
Q Consensus 146 ~~i~~~~-------~~~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~ 196 (632)
+|+.+.. .....+++.++++..++. .....||+|+.++++ |++||+.+++.
T Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~ 188 (265)
T TIGR02769 109 QIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAV 188 (265)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 3443210 111234567778887764 346789999988773 89999999999
Q ss_pred HHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 197 VQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 197 i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
+.+.|+++.+ ++|+|++||+++.+. .||++++|++|++++.|+++++... .++|.
T Consensus 189 l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~ 246 (265)
T TIGR02769 189 ILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLSF-KHPAG 246 (265)
T ss_pred HHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcCC-CCHHH
Confidence 9999999853 789999999999886 4999999999999999999999764 44444
No 229
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.86 E-value=1.4e-21 Score=199.59 Aligned_cols=163 Identities=18% Similarity=0.288 Sum_probs=126.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------------CcHHhhcceEEEcccCcccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------------APEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------------~~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
.+||+|++||+++|+||||||||||+++|.|+... .+..+++.++|++|++.+|..++.
T Consensus 39 ~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~~~tv~ 118 (276)
T PRK14271 39 QVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFPMSIM 118 (276)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccCCccHH
Confidence 39999999999999999999999999999875321 011346789999999987776665
Q ss_pred cccccccCC---CCCCHHH----HHHHHHHccchh--------hHhhCCccccccc-----------------ccCCCCH
Q 047286 144 EGQYIPYGK---QNASDEH----IRPAVQLANAEK--------SIDKLPLGLDTVV-----------------ATNAVDA 191 (632)
Q Consensus 144 ~~~~i~~~~---~~~~~~~----~~~~~~~~~l~~--------~i~~l~~g~~~~v-----------------~ts~LD~ 191 (632)
+ |+.++. ...+.++ +.+.++.+++.+ ....||.|..+++ +|++||+
T Consensus 119 e--ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~ 196 (276)
T PRK14271 119 D--NVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDP 196 (276)
T ss_pred H--HHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCH
Confidence 5 555431 1122222 344556666542 3567899988877 3999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
.+++.+.+.|+++.++.|+|++||++..+.. ||++++|++|++++.|+++++.+.+..
T Consensus 197 ~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~ 255 (276)
T PRK14271 197 TTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSPKH 255 (276)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCc
Confidence 9999999999998767899999999998765 999999999999999999999765443
No 230
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.86 E-value=6.2e-22 Score=176.99 Aligned_cols=150 Identities=23% Similarity=0.356 Sum_probs=123.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC---------------CCCcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFR---------------FYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~---------------~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++.+||+.+|.||||||||||+|.++.+. .++|...|.+++||.|.|.+|.+++.+|..++
T Consensus 21 ~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tVeDNlifP 100 (223)
T COG4619 21 NISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTVEDNLIFP 100 (223)
T ss_pred ceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccchhhccccc
Confidence 399999999999999999999999999886431 34677899999999999999999999854333
Q ss_pred cC--CCCCCHHHHHHHHHHccc-----hhhHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHh
Q 047286 150 YG--KQNASDEHIRPAVQLANA-----EKSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLV 205 (632)
Q Consensus 150 ~~--~~~~~~~~~~~~~~~~~l-----~~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~ 205 (632)
+. ++..+.......++.+++ .+.+..|++|..++++ ||+||+.+++.|.+.|.++.
T Consensus 101 ~~~r~rr~dr~aa~~llar~~l~~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsALD~~nkr~ie~mi~~~v 180 (223)
T COG4619 101 WQIRNRRPDRAAALDLLARFALPDSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEITSALDESNKRNIEEMIHRYV 180 (223)
T ss_pred hHHhccCCChHHHHHHHHHcCCchhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCchhhcChhhHHHHHHHHHHHh
Confidence 32 223455555666666654 4567889999998884 99999999999999999985
Q ss_pred --CCceEEEEecCchH-HhhcCeEEEEeCCeE
Q 047286 206 --TNQTVVIVANCLIT-IRNADCIIMVSKGKI 234 (632)
Q Consensus 206 --~~~tviiitH~~~~-~~~aD~i~vl~~G~i 234 (632)
++..++.|||+... ++++|+++-+..|++
T Consensus 181 ~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~ 212 (223)
T COG4619 181 REQNVAVLWITHDKDQAIRHADKVITLQPGHA 212 (223)
T ss_pred hhhceEEEEEecChHHHhhhhheEEEeccCcc
Confidence 46799999999977 788999999999976
No 231
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.86 E-value=1.8e-21 Score=198.03 Aligned_cols=164 Identities=21% Similarity=0.278 Sum_probs=127.7
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC------------------------cHHhhcceEEEcccCcccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA------------------------PEAEQEKIGLVSKEPIFLFCD 141 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~------------------------~~~~r~~i~~v~Q~~~~~~~~ 141 (632)
+||+|++||+++|+||||||||||+++|.|+.... +..+++.++|++|++.+|..+
T Consensus 35 vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~t 114 (265)
T PRK14252 35 INMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEVDPIEVRMRISMVFQKPNPFPKS 114 (265)
T ss_pred eEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccccccCHHHHhccEEEEccCCcCCcch
Confidence 99999999999999999999999999998753210 012456799999999877766
Q ss_pred cccccccccCCC--C-----CCHHHHHHHHHHccch--------hhHhhCCccccccc-----------------ccCCC
Q 047286 142 FNEGQYIPYGKQ--N-----ASDEHIRPAVQLANAE--------KSIDKLPLGLDTVV-----------------ATNAV 189 (632)
Q Consensus 142 ~~~~~~i~~~~~--~-----~~~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v-----------------~ts~L 189 (632)
+.+ |+.++.. . ..++++.++++.+++. .....||.|..+++ +|++|
T Consensus 115 v~e--ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gL 192 (265)
T PRK14252 115 IFE--NVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQQQRLCIARALATDPEILLFDEPTSAL 192 (265)
T ss_pred HHH--HHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccC
Confidence 554 5554311 1 1134556677766652 33466888988777 39999
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 190 DAQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 190 D~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
|+.+++.+.+.|+++.++.|+|++||+++.+. .||++++|++|++++.|+.+++...+...|
T Consensus 193 D~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 255 (265)
T PRK14252 193 DPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGATDTIFIKPKNKQ 255 (265)
T ss_pred CHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHH
Confidence 99999999999999877789999999999886 599999999999999999999876543433
No 232
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.86 E-value=1.2e-21 Score=197.89 Aligned_cols=163 Identities=21% Similarity=0.326 Sum_probs=125.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc----------------------HHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP----------------------EAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~----------------------~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|+..+.| ...++.++|++|++.++..++
T Consensus 23 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~tv 102 (252)
T PRK14255 23 GIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNPFPFSI 102 (252)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCccCCCcH
Confidence 3899999999999999999999999999987532100 123567999999998776555
Q ss_pred ccccccccCC--CC-CC----HHHHHHHHHHccc--------hhhHhhCCccccccc-----------------ccCCCC
Q 047286 143 NEGQYIPYGK--QN-AS----DEHIRPAVQLANA--------EKSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~--~~-~~----~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.+ |+.+.. .. .. .+++.+.++.+++ +....+||.|+.+++ +|++||
T Consensus 103 ~~--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD 180 (252)
T PRK14255 103 YE--NVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALD 180 (252)
T ss_pred HH--HHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCC
Confidence 54 554321 11 11 2334455555543 234567888988877 399999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
+.+++.+.+.|+++.++.|+|++||+++.+.. ||+|++|++|++++.|+++++...+..
T Consensus 181 ~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 240 (252)
T PRK14255 181 PISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMFLNPKE 240 (252)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCC
Confidence 99999999999998767899999999998864 999999999999999999998765443
No 233
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.86 E-value=3.1e-22 Score=191.08 Aligned_cols=123 Identities=28% Similarity=0.338 Sum_probs=88.6
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------------------------------hcH----------
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------------------------------VIY---------- 536 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------------------------------~~~---------- 536 (632)
-+|.-++++||||+||||||||.++|.|+.+|++ ++.
T Consensus 28 ~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~E 107 (252)
T COG1124 28 LEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSE 107 (252)
T ss_pred EEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhccceeEEecCCccccCcchhHHHHHhh
Confidence 3555567999999999999999999999977743 000
Q ss_pred HHHH-------HHHHHHHhc--CCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 537 SWII-------IKCTNFIAS--LPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 537 ~~~~-------~~~~~~i~~--lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
.+.+ ..+.+.... ||..+ .......||||||||||||||+.-
T Consensus 108 pl~~~~~~~~~~~i~~~L~~VgL~~~~---l~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL 184 (252)
T COG1124 108 PLRPHGLSKSQQRIAELLDQVGLPPSF---LDRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLL 184 (252)
T ss_pred hhccCCccHHHHHHHHHHHHcCCCHHH---HhcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHH
Confidence 0000 011122221 22222 234567899999999999999432
Q ss_pred -----------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhccCCchhHHH
Q 047286 582 -----------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKITDGTYASL 625 (632)
Q Consensus 582 -----------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l 625 (632)
++|+|.++.+.+ ||||+||++|+|||.++-+++...+.-.|.+.
T Consensus 185 ~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~~~h~ytr~ 240 (252)
T COG1124 185 LELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSHPSHPYTRE 240 (252)
T ss_pred HHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcCCccHHHHH
Confidence 899999999975 99999999999999999999998644455543
No 234
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.86 E-value=1.6e-21 Score=194.49 Aligned_cols=160 Identities=24% Similarity=0.346 Sum_probs=125.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||++++|++++|+||||||||||+++|.|+..... ...++.++|++|++.++.. ++.+ |+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQ--NIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEecccccccCCcHHH--HHhc
Confidence 4999999999999999999999999999986532110 0124579999999876653 5544 5654
Q ss_pred CCC------CCCHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ------NASDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~------~~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~ 203 (632)
+.. ....+++.++++..++.+. +..||+|..+++ +|++||+.+++.+.+.|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~ 174 (232)
T PRK10771 95 GLNPGLKLNAAQREKLHAIARQMGIEDLLARLPGQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQ 174 (232)
T ss_pred ccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 311 1123457778888887654 446788888777 3899999999999999998
Q ss_pred HhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 204 LVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 175 ~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 175 VCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 753 7899999999998765 999999999999999999988754
No 235
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=99.86 E-value=2e-21 Score=198.00 Aligned_cols=163 Identities=20% Similarity=0.293 Sum_probs=124.9
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC-----CC-----------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRF-----YA-----------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~-----~~-----------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||+|++||+++|+|+||||||||+++|.|+.. .. ....++.++|++|++.+|..++.
T Consensus 43 vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~tv~ 122 (271)
T PRK14238 43 INLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVEELRTNVGMVFQKPNPFPKSIY 122 (271)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHHHHhhhEEEEecCCccccccHH
Confidence 999999999999999999999999999987632 00 01235679999999987776665
Q ss_pred cccccccCC--CCC-C----HHHHHHHHHHcc--------chhhHhhCCcccccccc-----------------cCCCCH
Q 047286 144 EGQYIPYGK--QNA-S----DEHIRPAVQLAN--------AEKSIDKLPLGLDTVVA-----------------TNAVDA 191 (632)
Q Consensus 144 ~~~~i~~~~--~~~-~----~~~~~~~~~~~~--------l~~~i~~l~~g~~~~v~-----------------ts~LD~ 191 (632)
+ |+.++. ... . .+.+.++++..+ ++.....||+|..++++ |++||+
T Consensus 123 e--ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~ 200 (271)
T PRK14238 123 D--NVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDP 200 (271)
T ss_pred H--HHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCH
Confidence 5 565431 111 1 122344444432 23345678889888773 999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcH
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGA 250 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~ 250 (632)
.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++...+...
T Consensus 201 ~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 260 (271)
T PRK14238 201 ISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFSNPSDK 260 (271)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCCCH
Confidence 9999999999998778899999999998764 9999999999999999999987664443
No 236
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.86 E-value=6.1e-22 Score=194.86 Aligned_cols=152 Identities=24% Similarity=0.350 Sum_probs=117.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCcccc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLF-CDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~ 150 (632)
.+||++++||+++|+||||||||||+++|.|+..... ...++.++|++|++.++. .++.+ |+.+
T Consensus 18 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~--~l~~ 95 (213)
T cd03259 18 DLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAE--NIAF 95 (213)
T ss_pred ceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHHH--HHHh
Confidence 3999999999999999999999999999986532110 113467999999987654 35554 5544
Q ss_pred CCC--C----CCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ--N----ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~--~----~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~ 203 (632)
+.. . ...+++.++++..++.+ .+.+||+|+++++ +|++||+.+++.+.+.|++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~ 175 (213)
T cd03259 96 GLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKE 175 (213)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 311 1 11345667788877754 3567899998877 3999999999999999999
Q ss_pred HhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 204 LVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
+.+ ++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 176 ~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 176 LQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 753 7899999999998755 9999999999998765
No 237
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.86 E-value=2e-21 Score=196.26 Aligned_cols=165 Identities=22% Similarity=0.330 Sum_probs=124.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc----------------------HHhhcceEEEcccCccccc-c
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP----------------------EAEQEKIGLVSKEPIFLFC-D 141 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~----------------------~~~r~~i~~v~Q~~~~~~~-~ 141 (632)
.+||+|++||+++|+||||||||||+++|.|.....+ ...++.++|++|++.++.. +
T Consensus 22 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 101 (252)
T PRK14272 22 NVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNPFPTMS 101 (252)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCccCcCCC
Confidence 3999999999999999999999999999987632111 1235679999999876653 5
Q ss_pred cccccccccCC--CC-CCHH----HHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCC
Q 047286 142 FNEGQYIPYGK--QN-ASDE----HIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAV 189 (632)
Q Consensus 142 ~~~~~~i~~~~--~~-~~~~----~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~L 189 (632)
+.+ |+.++. .. ...+ ...+.++..++ +..+..||+|..++++ |++|
T Consensus 102 ~~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~L 179 (252)
T PRK14272 102 VFD--NVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIARALAVEPEILLMDEPTSAL 179 (252)
T ss_pred HHH--HHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 554 554321 11 1222 22333333332 3446778999988773 8999
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 190 DAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 190 D~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
|+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++...+...+
T Consensus 180 D~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 242 (252)
T PRK14272 180 DPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLFTNPRDER 242 (252)
T ss_pred CHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCcHH
Confidence 999999999999998777999999999998875 99999999999999999999876644444
No 238
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=99.86 E-value=1.3e-21 Score=195.16 Aligned_cols=159 Identities=19% Similarity=0.233 Sum_probs=122.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH-hhcceEEEcccCccccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA-EQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~-~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
.+||++++|++++|+||||||||||+++|.|+.... +.. .++.++|++|++.++.. ++.+ |
T Consensus 18 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~ 95 (232)
T cd03218 18 GVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEE--N 95 (232)
T ss_pred cceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEecCCccccccCcHHH--H
Confidence 399999999999999999999999999998653211 111 23569999999876654 5554 4
Q ss_pred cccCCC--CCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHH
Q 047286 148 IPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAA 200 (632)
Q Consensus 148 i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~ 200 (632)
+.+... ... .+++.++++..++.+ .+..||.|+++++ +|++||+.+++.+.+.
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~ 175 (232)
T cd03218 96 ILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKI 175 (232)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH
Confidence 543211 111 234566777777653 4567899998877 3999999999999999
Q ss_pred HHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 201 MVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 201 l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
|+++. ++.|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 176 l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 176 IKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 99885 47899999999987754 99999999999999999988754
No 239
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=99.86 E-value=1.3e-21 Score=196.11 Aligned_cols=161 Identities=24% Similarity=0.358 Sum_probs=125.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-----------------cHHhhcceEEEcccCcccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-----------------PEAEQEKIGLVSKEPIFLF-CDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-----------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~ 146 (632)
.+||++++||+++|+||||||||||+++|.|+.... ....++.++|++|++.++. .++.+
T Consensus 19 ~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~-- 96 (240)
T PRK09493 19 NIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALE-- 96 (240)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcHHH--
Confidence 399999999999999999999999999998653210 0124567999999987664 35544
Q ss_pred ccccCC---CCC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 147 YIPYGK---QNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 147 ~i~~~~---~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.++. ... ..+++.++++..++.+ ....||.|..+++ +|++||+.+++.+.
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~ 176 (240)
T PRK09493 97 NVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVL 176 (240)
T ss_pred HHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHH
Confidence 554431 111 1234567777777654 4567888988877 39999999999999
Q ss_pred HHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCC
Q 047286 199 AAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 199 ~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+.+
T Consensus 177 ~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 177 KVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 9999885 47899999999999865 9999999999999999999886543
No 240
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.86 E-value=1.5e-21 Score=191.89 Aligned_cols=152 Identities=21% Similarity=0.305 Sum_probs=118.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||++++||+++|+||||||||||+++|.|+..... ...++.++|++|++.++.. ++.+ |+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--nl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQ--NVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHH--HHhc
Confidence 4999999999999999999999999999986532110 1134679999999986643 4554 5654
Q ss_pred CCC---C---CCHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ---N---ASDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~---~---~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~ 203 (632)
+.. . ...+++.++++.+++.+. +..||.|+++++ +|++||+.+++.+.+.|++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~ 173 (211)
T cd03298 94 GLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLD 173 (211)
T ss_pred ccccccCccHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 321 1 124467778888887644 456888888777 3999999999999999999
Q ss_pred HhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 204 LVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
+.+ +.|+|++||+++.+.. ||++++|++|++++.|
T Consensus 174 ~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 174 LHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 853 7899999999998865 9999999999998754
No 241
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.86 E-value=1.7e-21 Score=196.54 Aligned_cols=165 Identities=23% Similarity=0.334 Sum_probs=127.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC--C---C-----------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF--Y---A-----------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~--~---~-----------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|+.. . + ....++.++|++|++.+|..+.
T Consensus 21 ~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~t~ 100 (250)
T PRK14266 21 NVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVELRKKVGMVFQKPNPFPKSI 100 (250)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHHhhheEEEecCCccCcchH
Confidence 3999999999999999999999999999986521 0 0 1124668999999998887665
Q ss_pred ccccccccCCC--C-CC----HHHHHHHHHHccch--------hhHhhCCcccccccc-----------------cCCCC
Q 047286 143 NEGQYIPYGKQ--N-AS----DEHIRPAVQLANAE--------KSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~-~~----~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
.+ |+.++.. . .+ .+++.++++.+++. .....||.|..++++ |++||
T Consensus 101 ~~--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEP~~gLD 178 (250)
T PRK14266 101 FD--NVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQQRLCIARTIAVSPEVILMDEPCSALD 178 (250)
T ss_pred HH--HHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCC
Confidence 54 5654311 1 11 23455666666652 335678889888773 89999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
+.+++.+.+.|+++.++.|+|++||++..+.. ||++++|++|++++.|+++++...+...+
T Consensus 179 ~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~~~~~~~ 240 (250)
T PRK14266 179 PISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFINPKDKR 240 (250)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHhCCCChH
Confidence 99999999999998778899999999998865 99999999999999999999876544433
No 242
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=99.86 E-value=1.6e-21 Score=197.53 Aligned_cols=161 Identities=22% Similarity=0.318 Sum_probs=124.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------cHHhhcceEEEcccCcccc-cc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------PEAEQEKIGLVSKEPIFLF-CD 141 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------~~~~r~~i~~v~Q~~~~~~-~~ 141 (632)
.+||++++||+++|+||||||||||+++|.|+.... +...++.++|++|++.++. .+
T Consensus 22 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 101 (258)
T PRK14241 22 DVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPFPTMS 101 (258)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccCCCCc
Confidence 399999999999999999999999999999764210 1124567999999987664 35
Q ss_pred cccccccccCC---CC----CCHHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCC
Q 047286 142 FNEGQYIPYGK---QN----ASDEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAV 189 (632)
Q Consensus 142 ~~~~~~i~~~~---~~----~~~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~L 189 (632)
+.+ |+.++. .. ...+++.++++..++ +..+.+||+|..++++ |++|
T Consensus 102 v~~--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~L 179 (258)
T PRK14241 102 IRD--NVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSAL 179 (258)
T ss_pred HHH--HHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccC
Confidence 544 554321 11 112345566666665 2335678999988873 8999
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEe------CCeEEEecChhHHhcCC
Q 047286 190 DAQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVS------KGKIVEKGTHDELIEDP 247 (632)
Q Consensus 190 D~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~------~G~i~~~g~~~el~~~~ 247 (632)
|+.++..+.+.|+++.+++|+|++||+++.+. .||++++|+ +|++++.|+++++...+
T Consensus 180 D~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~~~~~~~~~ 244 (258)
T PRK14241 180 DPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDDTEKIFSNP 244 (258)
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCCHHHHHhCc
Confidence 99999999999999876789999999999875 599999997 89999999999987543
No 243
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=99.86 E-value=1.7e-21 Score=194.85 Aligned_cols=160 Identities=22% Similarity=0.344 Sum_probs=124.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~ 149 (632)
.+||+|++||+++|+||||||||||+++|.|+.... +...++.++|++|++.++. .++.+ |+.
T Consensus 19 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~~~--~l~ 96 (236)
T TIGR03864 19 DVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSVRQ--NLR 96 (236)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcHHH--HHH
Confidence 399999999999999999999999999998653211 1122357999999987543 35544 554
Q ss_pred cCCC--CC----CHHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 150 YGKQ--NA----SDEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~~~--~~----~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+... .. ..+++.++++..++. ..+..||+|..+++ +|++||+.+++.+.+.|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~ 176 (236)
T TIGR03864 97 YHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVR 176 (236)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHH
Confidence 3211 11 123456677777664 44678999998887 399999999999999999
Q ss_pred HHh--CCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 203 KLV--TNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 203 ~~~--~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
++. ++.|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 177 ~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 177 ALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred HHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 985 37899999999998878999999999999999999888653
No 244
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.86 E-value=1.5e-21 Score=200.67 Aligned_cols=160 Identities=21% Similarity=0.301 Sum_probs=124.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------------cHHhhcceEEEcccC--cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------------PEAEQEKIGLVSKEP--IFLFCDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------------~~~~r~~i~~v~Q~~--~~~~~~~~ 143 (632)
.+||++++||+++|+||||||||||+++|+|+.... ....++.++|++|++ .++..++.
T Consensus 25 ~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~ 104 (287)
T PRK13641 25 NISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLFENTVL 104 (287)
T ss_pred eeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhceEEEEeChhhhhccchHH
Confidence 499999999999999999999999999998653210 122456799999997 34444554
Q ss_pred cccccccCCC--CCC----HHHHHHHHHHccch-h----hHhhCCcccccccc-----------------cCCCCHHHHH
Q 047286 144 EGQYIPYGKQ--NAS----DEHIRPAVQLANAE-K----SIDKLPLGLDTVVA-----------------TNAVDAQSER 195 (632)
Q Consensus 144 ~~~~i~~~~~--~~~----~~~~~~~~~~~~l~-~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~ 195 (632)
+ |+.++.. ... .+++.++++.+++. + .+..||.|++++++ |++||+.+++
T Consensus 105 e--~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~ 182 (287)
T PRK13641 105 K--DVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRK 182 (287)
T ss_pred H--HHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHH
Confidence 4 5654321 111 23466777888774 3 35678899988873 9999999999
Q ss_pred HHHHHHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 196 IVQAAMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 196 ~i~~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+.+.|+++. ++.|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 183 ~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13641 183 EMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFSD 235 (287)
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999985 4789999999999876 5999999999999999999988643
No 245
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.86 E-value=1.9e-21 Score=197.16 Aligned_cols=163 Identities=24% Similarity=0.327 Sum_probs=126.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-c---------------------HHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-P---------------------EAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-~---------------------~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++||+++|+|+||||||||+++|.|+...+ | ..++..++|++|++.+|..++
T Consensus 25 ~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~tv 104 (259)
T PRK14260 25 GISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPFPMSI 104 (259)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccCCccH
Confidence 399999999999999999999999999998753210 0 124567999999998777665
Q ss_pred ccccccccCCC---CCC----HHHHHHHHHHccch--------hhHhhCCccccccc-----------------ccCCCC
Q 047286 143 NEGQYIPYGKQ---NAS----DEHIRPAVQLANAE--------KSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~---~~~----~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.+ |+.++.. ... .+.+.++++.+++. .....||.|..+++ +|++||
T Consensus 105 ~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD 182 (259)
T PRK14260 105 YE--NVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALD 182 (259)
T ss_pred HH--HHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCC
Confidence 55 5654311 011 23455666766652 33467888988777 399999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEe-----CCeEEEecChhHHhcCCCc
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVS-----KGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~-----~G~i~~~g~~~el~~~~~~ 249 (632)
+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.|+++++.+.+..
T Consensus 183 ~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~~~~~~~~~ 247 (259)
T PRK14260 183 PIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVTTQIFSNPLD 247 (259)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCHHHHhcCCCC
Confidence 99999999999998777899999999998865 99999998 5999999999998765433
No 246
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.86 E-value=1.5e-21 Score=181.38 Aligned_cols=160 Identities=18% Similarity=0.321 Sum_probs=125.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------CCcHHhhcceEEEcccCcc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------YAPEAEQEKIGLVSKEPIF-LFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~~~~~~r~~i~~v~Q~~~~-~~~~~~~~~~i 148 (632)
.++|++++||+++|+||||||||||+|.|+|... +.+.++.++-+++||+..+ |.-+..+ .+
T Consensus 19 ~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFtv~e--VV 96 (259)
T COG4559 19 GVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFTVQE--VV 96 (259)
T ss_pred CcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceEHHH--HH
Confidence 3999999999999999999999999999986432 2344456778999998764 3333333 45
Q ss_pred ccCCC------CCCHHH--HHHHHHHccch----hhHhhCCccccccc-----------------------ccCCCCHHH
Q 047286 149 PYGKQ------NASDEH--IRPAVQLANAE----KSIDKLPLGLDTVV-----------------------ATNAVDAQS 193 (632)
Q Consensus 149 ~~~~~------~~~~~~--~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------------~ts~LD~~~ 193 (632)
.+|.. +..+++ .++++..+++. .+...|++|.+++| +||+||...
T Consensus 97 ~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~H 176 (259)
T COG4559 97 QMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDYRTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAH 176 (259)
T ss_pred HhcccccccCCCchhhHHHHHHHHHHcChhhhhccchhhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHH
Confidence 55531 111222 45666666543 56788999998887 399999999
Q ss_pred HHHHHHHHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 194 ERIVQAAMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 194 ~~~i~~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+..+++..+++. ++..|+.|-||++... +||||++|++|++++.|++++.+..
T Consensus 177 Q~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vlt~ 231 (259)
T COG4559 177 QHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVLTD 231 (259)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhcCH
Confidence 999999999995 5789999999999875 5999999999999999999998764
No 247
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.86 E-value=1.4e-21 Score=199.91 Aligned_cols=160 Identities=23% Similarity=0.307 Sum_probs=125.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCc--ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPI--FLFCDFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~--~~~~~~~~~~~ 147 (632)
.+||++++||+++|+||||||||||+++|+|+... .+...++.++|++|++. ++..++.+ |
T Consensus 22 ~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~--~ 99 (277)
T PRK13652 22 NINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVEQ--D 99 (277)
T ss_pred EeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHHH--H
Confidence 39999999999999999999999999999865221 11234567999999973 44455554 5
Q ss_pred cccCCC--CCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHH
Q 047286 148 IPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAA 200 (632)
Q Consensus 148 i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~ 200 (632)
+.++.. ..+ .+++.++++.+++.+ .+..||+|+.+++ +|++||+.+++.+.+.
T Consensus 100 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~ 179 (277)
T PRK13652 100 IAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDF 179 (277)
T ss_pred HHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 554321 122 234677788877654 3567888888777 3999999999999999
Q ss_pred HHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 201 MVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 201 l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
++++.+ +.|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 180 l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 180 LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 998854 789999999999885 5999999999999999999998754
No 248
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.86 E-value=1.2e-21 Score=200.59 Aligned_cols=160 Identities=22% Similarity=0.336 Sum_probs=125.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------cHHhhcceEEEcccCc--cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------PEAEQEKIGLVSKEPI--FLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------~~~~r~~i~~v~Q~~~--~~~~~~~~~~ 146 (632)
.+||+|++||+++|+||||||||||+++|.|+.... +...++.++|++|+|. ++..++.+
T Consensus 28 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~-- 105 (280)
T PRK13633 28 DVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIVEE-- 105 (280)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHHhhheEEEecChhhhhccccHHH--
Confidence 399999999999999999999999999998653211 1234678999999984 33333433
Q ss_pred ccccCCC--CCC----HHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHH
Q 047286 147 YIPYGKQ--NAS----DEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQA 199 (632)
Q Consensus 147 ~i~~~~~--~~~----~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~ 199 (632)
|+.++.. ... .+++.++++.+++.+. +..||+|+.+++ +|++||+.++..+.+
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~ 185 (280)
T PRK13633 106 DVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVN 185 (280)
T ss_pred HHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH
Confidence 5655421 112 3456777888887654 456778888777 399999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 200 AMVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.|+++.+ +.|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 186 ~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 186 TIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999853 7899999999999878999999999999999999998654
No 249
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.86 E-value=7.1e-22 Score=195.39 Aligned_cols=155 Identities=23% Similarity=0.314 Sum_probs=119.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc----------HHhhcceEEEcccCcccc-cccccccccccCCC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP----------EAEQEKIGLVSKEPIFLF-CDFNEGQYIPYGKQ 153 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~----------~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~~~~ 153 (632)
.+||+|++|++++|+||||||||||+++|.|+..... ...++.++|++|++.++. .++.+ |+.++..
T Consensus 22 ~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q~~~~~~~~tv~e--~l~~~~~ 99 (220)
T cd03293 22 DISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQQDALLPWLTVLD--NVALGLE 99 (220)
T ss_pred ceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEecccccccCCCHHH--HHHHHHH
Confidence 3999999999999999999999999999986532211 123567999999987654 35544 5544311
Q ss_pred --CC----CHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-
Q 047286 154 --NA----SDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV- 205 (632)
Q Consensus 154 --~~----~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~- 205 (632)
.. ..+++.++++..++.+. ...||+|+.+++ +|++||+.+++.+.+.|+++.
T Consensus 100 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~ 179 (220)
T cd03293 100 LQGVPKAEARERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWR 179 (220)
T ss_pred HcCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH
Confidence 11 23456777888777543 457888988877 399999999999999999874
Q ss_pred C-CceEEEEecCchHHh-hcCeEEEEe--CCeEEEecChh
Q 047286 206 T-NQTVVIVANCLITIR-NADCIIMVS--KGKIVEKGTHD 241 (632)
Q Consensus 206 ~-~~tviiitH~~~~~~-~aD~i~vl~--~G~i~~~g~~~ 241 (632)
+ ++|+|++||+++.+. .||++++|+ +|++++.++.+
T Consensus 180 ~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 180 ETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred HcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 3 789999999999775 599999999 79999987653
No 250
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.86 E-value=2.8e-21 Score=198.14 Aligned_cols=160 Identities=24% Similarity=0.381 Sum_probs=125.3
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----------------------CcHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----------------------APEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----------------------~~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||+|++||+++|+||||||||||+++|.|+..+ ++...++.++|++|++.+|..++.
T Consensus 58 is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~~~~~~~i~~v~q~~~l~~~tv~ 137 (285)
T PRK14254 58 VSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDPVALRRRIGMVFQKPNPFPKSIY 137 (285)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCcCCHH
Confidence 9999999999999999999999999999876321 011245679999999987765555
Q ss_pred cccccccCC-----CCCCHHHHHHHHHHccc--------hhhHhhCCcccccccc-----------------cCCCCHHH
Q 047286 144 EGQYIPYGK-----QNASDEHIRPAVQLANA--------EKSIDKLPLGLDTVVA-----------------TNAVDAQS 193 (632)
Q Consensus 144 ~~~~i~~~~-----~~~~~~~~~~~~~~~~l--------~~~i~~l~~g~~~~v~-----------------ts~LD~~~ 193 (632)
+ |+.+.. .....+++.++++..++ +.....||+|++++++ |++||+.+
T Consensus 138 e--nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~ 215 (285)
T PRK14254 138 D--NVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVA 215 (285)
T ss_pred H--HHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHH
Confidence 4 554321 11123456777777765 2345689999988873 99999999
Q ss_pred HHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEE-EEeCCeEEEecChhHHhcCC
Q 047286 194 ERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCII-MVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 194 ~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~-vl~~G~i~~~g~~~el~~~~ 247 (632)
++.+.+.|+++.++.|+|++||+++.+.. |||++ +|++|++++.|+++++...+
T Consensus 216 ~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~~~~ 271 (285)
T PRK14254 216 TSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIFENP 271 (285)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHHhCc
Confidence 99999999998767899999999998865 99975 57999999999999886543
No 251
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=99.86 E-value=2.4e-21 Score=189.93 Aligned_cols=152 Identities=22% Similarity=0.358 Sum_probs=119.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------c---HHhhcceEEEcccCcccc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------P---EAEQEKIGLVSKEPIFLF-CDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------~---~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~ 150 (632)
.+||++++|++++|+||||||||||+++|.|+.... . ...++.++|++|++.++. .++.+ |+.+
T Consensus 18 ~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--~l~~ 95 (208)
T cd03268 18 DISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTARE--NLRL 95 (208)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecCCCccCccCcHHH--HHHH
Confidence 399999999999999999999999999998653211 0 124567999999987653 35554 5543
Q ss_pred CC--CCCCHHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-C
Q 047286 151 GK--QNASDEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-T 206 (632)
Q Consensus 151 ~~--~~~~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~ 206 (632)
.. .....+++.++++..++. ....+||+|.++++ +|++||+.+++.+.+.|+++. +
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~ 175 (208)
T cd03268 96 LARLLGIRKKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQ 175 (208)
T ss_pred HHHhcCCcHHHHHHHHHHcCCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHC
Confidence 21 122456677888888764 34667999998887 399999999999999999876 4
Q ss_pred CceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 207 NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 207 ~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
++|+|++||++..+.. ||++++|++|++++.|
T Consensus 176 ~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 176 GITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 7899999999998865 9999999999998764
No 252
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=99.86 E-value=3.9e-21 Score=192.23 Aligned_cols=161 Identities=28% Similarity=0.405 Sum_probs=125.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||++.+||+++|+||||||||||+++|.|...... ...++.++|++|++.+|.. ++.+ |+.+
T Consensus 18 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e--nl~~ 95 (237)
T TIGR00968 18 DVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVRD--NIAF 95 (237)
T ss_pred eEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHHH--HHHh
Confidence 3999999999999999999999999999986532110 1235679999999986653 5555 5544
Q ss_pred CCC--CC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ--NA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~--~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~ 203 (632)
... .. ..+++.++++..++.+ ....+|.|+.+++ +|++||+.+++.+.+.|++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~ 175 (237)
T TIGR00968 96 GLEIRKHPKAKIKARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRK 175 (237)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 321 11 1345567777777643 3456888988777 3899999999999999998
Q ss_pred HhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCC
Q 047286 204 LVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
+.+ ++|+|++||++..+.. ||++++|++|++++.|+++++.+.+
T Consensus 176 ~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~ 222 (237)
T TIGR00968 176 LHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDHP 222 (237)
T ss_pred HHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcCC
Confidence 754 6899999999998765 9999999999999999999987543
No 253
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.86 E-value=1.6e-20 Score=191.40 Aligned_cols=158 Identities=21% Similarity=0.284 Sum_probs=120.0
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH--hhcceEEEcccCcccccccccccccccCCCCCCHHHHHHH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA--EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPA 163 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~--~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (632)
+||+|++||+++|+||||||||||+++|.|........ +...++|++|++.++..++.+ |+.++.. ....++.+.
T Consensus 56 vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~~~l~~~tv~e--nl~~~~~-~~~~~~~~~ 132 (282)
T cd03291 56 INLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQFSWIMPGTIKE--NIIFGVS-YDEYRYKSV 132 (282)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCcccccccCHHH--Hhhcccc-cCHHHHHHH
Confidence 89999999999999999999999999999653222111 234599999999877766655 5655432 123344555
Q ss_pred HHHccchhhH---------------hhCCccccccc-----------------ccCCCCHHHHHHHHHHH-HHHhCCceE
Q 047286 164 VQLANAEKSI---------------DKLPLGLDTVV-----------------ATNAVDAQSERIVQAAM-VKLVTNQTV 210 (632)
Q Consensus 164 ~~~~~l~~~i---------------~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l-~~~~~~~tv 210 (632)
++.+++.+.+ ..||.|..+++ +|++||+.+++.+.+.+ ..+.++.|+
T Consensus 133 l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tI 212 (282)
T cd03291 133 VKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTR 212 (282)
T ss_pred HHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEE
Confidence 5555555443 35666666655 38999999999998754 566667899
Q ss_pred EEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 211 VIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 211 iiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|++||++..+..||++++|++|++++.|+++++...
T Consensus 213 iiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 248 (282)
T cd03291 213 ILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL 248 (282)
T ss_pred EEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999998888999999999999999999998754
No 254
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.86 E-value=1.6e-21 Score=199.13 Aligned_cols=160 Identities=23% Similarity=0.329 Sum_probs=124.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-----------------cHHhhcceEEEcccCc--ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-----------------PEAEQEKIGLVSKEPI--FLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-----------------~~~~r~~i~~v~Q~~~--~~~~~~~~~ 145 (632)
.+||+|++||+++|+||||||||||+++|+|+.... ...+++.++|++|++. ++..++.+
T Consensus 20 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e- 98 (275)
T PRK13639 20 GINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLFAPTVEE- 98 (275)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhheEEEeeChhhhhccccHHH-
Confidence 399999999999999999999999999998652110 1124678999999973 44445544
Q ss_pred cccccCCC--CCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 146 QYIPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.++.. ... .+++.++++.+++.+ ....||.|+.+++ +|++||+.+++.+.
T Consensus 99 -~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~ 177 (275)
T PRK13639 99 -DVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIM 177 (275)
T ss_pred -HHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHH
Confidence 5654321 111 245667777777643 4577888988777 39999999999999
Q ss_pred HHHHHHhC-CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 199 AAMVKLVT-NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 199 ~~l~~~~~-~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.|.++.+ +.|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 178 ~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 178 KLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999854 789999999999886 5999999999999999999998653
No 255
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.86 E-value=1.8e-21 Score=198.52 Aligned_cols=160 Identities=20% Similarity=0.321 Sum_probs=122.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-----------------cHHhhcceEEEcccCc--ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-----------------PEAEQEKIGLVSKEPI--FLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-----------------~~~~r~~i~~v~Q~~~--~~~~~~~~~ 145 (632)
.+||++++|++++|+||||||||||+++|.|+.... ....++.++|++|++. ++..++.+
T Consensus 19 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~- 97 (271)
T PRK13638 19 GLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDS- 97 (271)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheEEEeeChhhccccccHHH-
Confidence 399999999999999999999999999998653210 1234567999999975 23334443
Q ss_pred cccccCC--CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 146 QYIPYGK--QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~--~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.++. .... .+++.++++..++.+ .+..||+|+++++ +|++||+.+++.+.
T Consensus 98 -~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~ 176 (271)
T PRK13638 98 -DIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMI 176 (271)
T ss_pred -HHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 444321 1111 234556777777643 4567899998887 39999999999999
Q ss_pred HHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 199 AAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 199 ~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.|+++. ++.|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 177 ~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 177 AIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999985 47899999999998854 999999999999999999988654
No 256
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.86 E-value=2.9e-21 Score=195.27 Aligned_cols=168 Identities=18% Similarity=0.327 Sum_probs=129.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------------cHHhhcceEEEcccCccccc-cc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------------PEAEQEKIGLVSKEPIFLFC-DF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------------~~~~r~~i~~v~Q~~~~~~~-~~ 142 (632)
.+||++++||+++|+||||||||||+++|.|..... +...++.++|++|++.++.. ++
T Consensus 28 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 107 (257)
T PRK14246 28 DITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGMVFQQPNPFPHLSI 107 (257)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHhcceEEEccCCccCCCCcH
Confidence 399999999999999999999999999998653211 11246789999999987653 65
Q ss_pred ccccccccCCC--CC-CH----HHHHHHHHHccch--------hhHhhCCccccccc-----------------ccCCCC
Q 047286 143 NEGQYIPYGKQ--NA-SD----EHIRPAVQLANAE--------KSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~~--~~-~~----~~~~~~~~~~~l~--------~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.+ |+.++.. .. .. +++.++++..++. .....+|.|..+++ +|++||
T Consensus 108 ~~--nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD 185 (257)
T PRK14246 108 YD--NIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTIARALALKPKVLLMDEPTSMID 185 (257)
T ss_pred HH--HHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCC
Confidence 55 5554311 11 11 3345666776663 23456788887776 399999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHHHH
Q 047286 191 AQSERIVQAAMVKLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYSQL 254 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~ 254 (632)
+.+++.+.+.|.++.++.|+|++||+...+. .||++++|++|++++.|+++++.+.+...|.+.
T Consensus 186 ~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~~~~~~~~~~~ 250 (257)
T PRK14246 186 IVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIFTSPKNELTEK 250 (257)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCcHHHHH
Confidence 9999999999999877799999999999885 599999999999999999999987655555443
No 257
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.86 E-value=2e-21 Score=193.48 Aligned_cols=157 Identities=18% Similarity=0.272 Sum_probs=120.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHH-hhcceEEEcccCccccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEA-EQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~-~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
.+||++++||+++|+||||||||||+++|.|+... ++.. .++.++|++|++.+|.. ++.+ |
T Consensus 18 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~ 95 (230)
T TIGR03410 18 GVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVEE--N 95 (230)
T ss_pred ceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCcHHH--H
Confidence 39999999999999999999999999999865321 1111 24679999999986653 5544 5
Q ss_pred cccCCC--CCC-HHHHHHHHHHcc-----chhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 148 IPYGKQ--NAS-DEHIRPAVQLAN-----AEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 148 i~~~~~--~~~-~~~~~~~~~~~~-----l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+.++.. ... .+...++++..+ .+..+..||+|..+++ +|++||+.+++.+.+.|.
T Consensus 96 l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~ 175 (230)
T TIGR03410 96 LLTGLAALPRRSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIR 175 (230)
T ss_pred HHHHHHhcCcchHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHH
Confidence 544311 111 223345555443 2455778999998877 399999999999999999
Q ss_pred HHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 203 KLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 203 ~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 176 ~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 176 RLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9864 6899999999998875 999999999999999999887
No 258
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.86 E-value=2.5e-21 Score=199.27 Aligned_cols=160 Identities=21% Similarity=0.327 Sum_probs=123.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--------------------CcHHhhcceEEEcccCc--cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--------------------APEAEQEKIGLVSKEPI--FLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--------------------~~~~~r~~i~~v~Q~~~--~~~~~~ 142 (632)
.+||++++||+++|+||||||||||+++|+|+... ....+++.++|++|++. ++..++
T Consensus 29 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv 108 (289)
T PRK13645 29 NTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQLFQETI 108 (289)
T ss_pred eeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccHHHHhccEEEEEeCcchhhhhhHH
Confidence 39999999999999999999999999999865311 01234667999999973 344455
Q ss_pred ccccccccCCC--CCCH----HHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCCHHHH
Q 047286 143 NEGQYIPYGKQ--NASD----EHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVDAQSE 194 (632)
Q Consensus 143 ~~~~~i~~~~~--~~~~----~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD~~~~ 194 (632)
.+ |+.++.. .... +++.++++..++. ..+..||+|+.++++ |++||+.++
T Consensus 109 ~e--nl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~ 186 (289)
T PRK13645 109 EK--DIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGE 186 (289)
T ss_pred HH--HHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHH
Confidence 44 5554321 1122 3345666766662 346779999988873 999999999
Q ss_pred HHHHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 195 RIVQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 195 ~~i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.+.+.|+++.+ ++|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 187 ~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 241 (289)
T PRK13645 187 EDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEIFSN 241 (289)
T ss_pred HHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999998853 789999999999875 5999999999999999999888653
No 259
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=99.86 E-value=2.3e-21 Score=197.15 Aligned_cols=158 Identities=23% Similarity=0.338 Sum_probs=123.2
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCccccc-ccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFC-DFNEGQYIP 149 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~ 149 (632)
+||++++|++++|+||||||||||+++|.|+... .+...++.++|++|++.+++. ++.+ |+.
T Consensus 30 vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e--~l~ 107 (265)
T PRK10575 30 LSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMTVRE--LVA 107 (265)
T ss_pred eeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCccHHH--HHH
Confidence 9999999999999999999999999999865321 112345679999999765443 4443 555
Q ss_pred cCCC----------CCCHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 150 YGKQ----------NASDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 150 ~~~~----------~~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
++.. ....+++.++++.+++.+. +.+||+|..+++ +|++||+.+++.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~ 187 (265)
T PRK10575 108 IGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVL 187 (265)
T ss_pred hCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHH
Confidence 4311 1123456778888877554 456888888777 39999999999999
Q ss_pred HHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 199 AAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 199 ~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+.|.++.+ +.|+|++||+++.+. .||++++|++|++++.|+.+++..
T Consensus 188 ~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 188 ALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 99999853 789999999999886 599999999999999999988753
No 260
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=99.85 E-value=1.2e-21 Score=193.18 Aligned_cols=148 Identities=20% Similarity=0.297 Sum_probs=115.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---HhhcceEEEcccCcccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---AEQEKIGLVSKEPIFLF-CDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~~r~~i~~v~Q~~~~~~-~~~~~~ 145 (632)
.+||++++||+++|+||||||||||+++|.|+.... +. ..++.++|++|++.++. .++.+
T Consensus 21 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e- 99 (216)
T TIGR00960 21 NLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRTVYD- 99 (216)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHhceEEecCccccccccHHH-
Confidence 399999999999999999999999999998653210 01 14568999999987665 35554
Q ss_pred cccccCC-----C-CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 146 QYIPYGK-----Q-NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~-----~-~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.++. . ....+++.++++.+++.+ ...+||+|+.+++ +|++||+.+++.+.
T Consensus 100 -~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~ 178 (216)
T TIGR00960 100 -NVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIM 178 (216)
T ss_pred -HHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHH
Confidence 555431 1 112345677888887754 4567888998887 39999999999999
Q ss_pred HHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeE
Q 047286 199 AAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKI 234 (632)
Q Consensus 199 ~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i 234 (632)
+.|+++. ++.|+|++||+++.+.. ||++++|++|++
T Consensus 179 ~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 179 RLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999885 47899999999998865 999999999975
No 261
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=99.85 E-value=2.9e-21 Score=195.36 Aligned_cols=159 Identities=19% Similarity=0.341 Sum_probs=123.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCccccc-cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i 148 (632)
.+||++++|++++|+||||||||||+++|.|+.... +...++.++|++|++.++.. ++.+ |+
T Consensus 20 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~i 97 (255)
T PRK11231 20 DLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGITVRE--LV 97 (255)
T ss_pred eeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCccHHH--HH
Confidence 399999999999999999999999999998652211 11235679999999875543 4444 55
Q ss_pred ccCCC----------CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 149 PYGKQ----------NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 149 ~~~~~----------~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
.++.. ....+++.++++..++.+ ....||+|..+++ +|++||+.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l 177 (255)
T PRK11231 98 AYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVEL 177 (255)
T ss_pred HhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHH
Confidence 54311 112345667777777654 4567888988877 3999999999999
Q ss_pred HHHHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 198 QAAMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 198 ~~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
.+.|+++. ++.|+|++||+++.+. .||++++|++|+++..|+++++..
T Consensus 178 ~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 178 MRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 99999875 4789999999999876 499999999999999999988753
No 262
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.85 E-value=3.1e-21 Score=197.36 Aligned_cols=160 Identities=21% Similarity=0.320 Sum_probs=125.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCc--ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPI--FLFCDFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~--~~~~~~~~~~~ 147 (632)
.+||++++||+++|+|+||||||||+++|.|+... .....++.++|++|++. ++..++.+ |
T Consensus 25 ~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e--n 102 (277)
T PRK13642 25 GVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGATVED--D 102 (277)
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccCCHHH--H
Confidence 49999999999999999999999999999865321 11235678999999974 34445554 5
Q ss_pred cccCCC--CCCH----HHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHH
Q 047286 148 IPYGKQ--NASD----EHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAA 200 (632)
Q Consensus 148 i~~~~~--~~~~----~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~ 200 (632)
+.++.. .... +++.++++.+++.+. +..||+|..+++ +|++||+.+++.+.+.
T Consensus 103 i~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~ 182 (277)
T PRK13642 103 VAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRV 182 (277)
T ss_pred HHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 654321 1122 345667777776544 456888888777 3999999999999999
Q ss_pred HHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 201 MVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 201 l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|+++.+ +.|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 183 l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 183 IHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 998864 7899999999999888999999999999999999998754
No 263
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.85 E-value=3.7e-21 Score=193.10 Aligned_cols=159 Identities=19% Similarity=0.256 Sum_probs=122.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------------cHHhhcceEEEcccCccccc-cc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------------PEAEQEKIGLVSKEPIFLFC-DF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------------~~~~r~~i~~v~Q~~~~~~~-~~ 142 (632)
.+||++++||+++|+||||||||||+++|+|..... ....++.++|++|++.++.. ++
T Consensus 20 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 99 (242)
T PRK11124 20 DITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTV 99 (242)
T ss_pred eeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHHhheEEEecCccccCCCcH
Confidence 399999999999999999999999999998653210 01246689999999976643 55
Q ss_pred ccccccccCC---CCC----CHHHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHH
Q 047286 143 NEGQYIPYGK---QNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSE 194 (632)
Q Consensus 143 ~~~~~i~~~~---~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~ 194 (632)
.+ |+.+.. ... ..+++.+.++..++.+ .+..||+|+.++++ |++||+.++
T Consensus 100 ~e--~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~ 177 (242)
T PRK11124 100 QQ--NLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEIT 177 (242)
T ss_pred HH--HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHH
Confidence 44 554210 011 1234566777777654 35668888888773 999999999
Q ss_pred HHHHHHHHHHhC-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 195 RIVQAAMVKLVT-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 195 ~~i~~~l~~~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+.+.+.|+++.+ ++|+|++||++..+.. ||++++|++|++++.|+++++..
T Consensus 178 ~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 178 AQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 999999998864 7899999999998865 99999999999999999888753
No 264
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.85 E-value=2.8e-21 Score=198.23 Aligned_cols=160 Identities=25% Similarity=0.382 Sum_probs=123.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------------------CcHHhhcceEEEcccC--cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------------------APEAEQEKIGLVSKEP--IFLFCDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------------------~~~~~r~~i~~v~Q~~--~~~~~~~~ 143 (632)
.+||+|++|++++|+||||||||||+++|.|+... .....++.++|++|++ .++..++.
T Consensus 25 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 104 (280)
T PRK13649 25 DVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLFEETVL 104 (280)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhccccHH
Confidence 49999999999999999999999999999865311 0123466799999997 45555555
Q ss_pred cccccccCCC--CCCH----HHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCHHHHH
Q 047286 144 EGQYIPYGKQ--NASD----EHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDAQSER 195 (632)
Q Consensus 144 ~~~~i~~~~~--~~~~----~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~ 195 (632)
+ |+.++.. ..+. +.+.++++..++. ..+.+||+|+.+++ +|++||+.+++
T Consensus 105 e--~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~ 182 (280)
T PRK13649 105 K--DVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRK 182 (280)
T ss_pred H--HHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHH
Confidence 5 5554311 1122 2345667777664 23567899998887 39999999999
Q ss_pred HHHHHHHHHhC-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 196 IVQAAMVKLVT-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 196 ~i~~~l~~~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 183 ~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 183 ELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999998854 7899999999998864 999999999999999999988653
No 265
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.85 E-value=2e-21 Score=197.96 Aligned_cols=160 Identities=23% Similarity=0.351 Sum_probs=123.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCc-cccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPI-FLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~-~~~~-~~~~~~~ 147 (632)
.+||++++||+++|+||||||||||+++|+|+... .....++.++|++|++. .+.. ++.+ |
T Consensus 27 ~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~--~ 104 (269)
T PRK13648 27 DVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGSIVKY--D 104 (269)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccccHHH--H
Confidence 49999999999999999999999999999865321 11235678999999985 3333 3333 4
Q ss_pred cccCCC--CCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHH
Q 047286 148 IPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAA 200 (632)
Q Consensus 148 i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~ 200 (632)
+.++.. ... .+++.++++..++.+ .+..||.|+.+++ +|++||+.+++.+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~ 184 (269)
T PRK13648 105 VAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDL 184 (269)
T ss_pred HHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 544321 111 234567777777654 3456888888777 3999999999999999
Q ss_pred HHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 201 MVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 201 l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|+++.+ +.|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 185 L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 185 VRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 998853 6899999999988877999999999999999999988654
No 266
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=99.85 E-value=2.5e-21 Score=191.24 Aligned_cols=152 Identities=16% Similarity=0.323 Sum_probs=118.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--------------CcHHhhcceEEEcccCccccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--------------APEAEQEKIGLVSKEPIFLFC-DFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--------------~~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|+... .+..+++.++|++|++.+|.. ++.+ |+.
T Consensus 23 ~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--~l~ 100 (218)
T cd03266 23 GVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTARE--NLE 100 (218)
T ss_pred ceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHH--HHH
Confidence 39999999999999999999999999999865321 112346789999999976653 5554 554
Q ss_pred cCCC--CC----CHHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 150 YGKQ--NA----SDEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~~~--~~----~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+... .. ..+++.++++..++. ..+..||+|.++++ +|++||+.+++.+.+.|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~ 180 (218)
T cd03266 101 YFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIR 180 (218)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHH
Confidence 3211 11 134567778887765 35678999998877 399999999999999999
Q ss_pred HHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 203 KLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 203 ~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
++. +++|+|++||++..+.. ||++++|++|++++.|
T Consensus 181 ~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 181 QLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 985 47899999999988764 9999999999998754
No 267
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=99.85 E-value=5.1e-21 Score=192.01 Aligned_cols=159 Identities=20% Similarity=0.228 Sum_probs=123.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c-HHhhcceEEEcccCccccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P-EAEQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~-~~~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
.+||++++|++++|+||||||||||+++|.|..... + ...++.++|++|++.++.. ++.+ |
T Consensus 21 ~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--n 98 (241)
T PRK10895 21 DVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYD--N 98 (241)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCcHHH--H
Confidence 399999999999999999999999999998653211 1 1135679999999876653 5544 5
Q ss_pred cccCCC---CCC----HHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHH
Q 047286 148 IPYGKQ---NAS----DEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQA 199 (632)
Q Consensus 148 i~~~~~---~~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~ 199 (632)
+.+... ..+ .+++.+.++..++. .....||+|..+++ +|++||+.+++.+.+
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~ 178 (241)
T PRK10895 99 LMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR 178 (241)
T ss_pred HhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 544211 111 23456667776664 34677999998877 399999999999999
Q ss_pred HHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 200 AMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 200 ~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
.++++. +++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 179 ~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 179 IIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred HHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 998875 4789999999998775 599999999999999999998864
No 268
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=99.85 E-value=3.3e-21 Score=195.74 Aligned_cols=157 Identities=19% Similarity=0.256 Sum_probs=122.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-----------------------HHhhcceEEEcccCccccc-
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-----------------------EAEQEKIGLVSKEPIFLFC- 140 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-----------------------~~~r~~i~~v~Q~~~~~~~- 140 (632)
.+||++++||+++|+||||||||||+++|.|....++ ...++.++|++|++.++..
T Consensus 22 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 101 (262)
T PRK09984 22 AVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRL 101 (262)
T ss_pred cceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccccccCC
Confidence 3999999999999999999999999999986642210 1235579999999876652
Q ss_pred ccccccccccCCC--------------CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------c
Q 047286 141 DFNEGQYIPYGKQ--------------NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------A 185 (632)
Q Consensus 141 ~~~~~~~i~~~~~--------------~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ 185 (632)
++.+ |+.++.. ....+++.++++..++.+ ....||.|..+++ +
T Consensus 102 tv~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP 179 (262)
T PRK09984 102 SVLE--NVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEP 179 (262)
T ss_pred cHHH--HHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCccccCHHHHHHHHHHHHHhcCCCEEEecCc
Confidence 4444 5544311 111345677888777753 4566888988877 3
Q ss_pred cCCCCHHHHHHHHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHH
Q 047286 186 TNAVDAQSERIVQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 186 ts~LD~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el 243 (632)
|++||+.+.+.+.+.|+++.+ +.|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 180 t~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 180 IASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF 240 (262)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHh
Confidence 999999999999999999853 789999999999765 5999999999999999999886
No 269
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.85 E-value=3.7e-21 Score=195.19 Aligned_cols=163 Identities=20% Similarity=0.311 Sum_probs=126.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------------cHHhhcceEEEcccCccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------------PEAEQEKIGLVSKEPIFLFCDF 142 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------------~~~~r~~i~~v~Q~~~~~~~~~ 142 (632)
.+||++++|++++|+||||||||||+++|.|+.... ...+++.++|++|++.+|..++
T Consensus 25 ~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l~~~tv 104 (261)
T PRK14258 25 GVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNLFPMSV 104 (261)
T ss_pred ceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCccCcccH
Confidence 399999999999999999999999999998763221 0123567999999988776565
Q ss_pred ccccccccCC------CCCC-HHHHHHHHHHccch--------hhHhhCCccccccc-----------------ccCCCC
Q 047286 143 NEGQYIPYGK------QNAS-DEHIRPAVQLANAE--------KSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 143 ~~~~~i~~~~------~~~~-~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
.+ |+.+.. .... .+++.++++..++. .....||.|+.+++ +|++||
T Consensus 105 ~e--nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD 182 (261)
T PRK14258 105 YD--NVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLD 182 (261)
T ss_pred HH--HHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 55 554321 1111 23456667776652 34567899988877 399999
Q ss_pred HHHHHHHHHHHHHHh--CCceEEEEecCchHHhh-cCeEEEEeC-----CeEEEecChhHHhcCCCc
Q 047286 191 AQSERIVQAAMVKLV--TNQTVVIVANCLITIRN-ADCIIMVSK-----GKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~--~~~tviiitH~~~~~~~-aD~i~vl~~-----G~i~~~g~~~el~~~~~~ 249 (632)
+.+++.+.+.|+++. .+.|+|++||++..+.. ||+|++|++ |++++.|+++++.+.+..
T Consensus 183 ~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~~~~~~~~~ 249 (261)
T PRK14258 183 PIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFGLTKKIFNSPHD 249 (261)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeCCHHHHHhCCCC
Confidence 999999999999874 37899999999998865 999999999 999999999999765443
No 270
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.85 E-value=3.6e-21 Score=192.57 Aligned_cols=159 Identities=18% Similarity=0.204 Sum_probs=121.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcH-HhhcceEEEcccCccccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APE-AEQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~-~~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
.+||++++||+++|+||||||||||+++|.|+... ++. ..++.++|++|++.+|.. ++.+ |
T Consensus 23 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~ 100 (237)
T PRK11614 23 EVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEE--N 100 (237)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCCcHHH--H
Confidence 39999999999999999999999999999865321 011 135679999999876653 5544 5
Q ss_pred cccCCCCC----CHHHHHHHHHHc-cc----hhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHH
Q 047286 148 IPYGKQNA----SDEHIRPAVQLA-NA----EKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAM 201 (632)
Q Consensus 148 i~~~~~~~----~~~~~~~~~~~~-~l----~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l 201 (632)
+.++.... ..+++.++++.. ++ +..+..||+|..+++ +|++||+.+++.+.+.|
T Consensus 101 l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l 180 (237)
T PRK11614 101 LAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTI 180 (237)
T ss_pred HHHhhhccChhHHHHHHHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHH
Confidence 65432111 122344444444 23 345678999998877 39999999999999999
Q ss_pred HHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 202 VKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 202 ~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+++. ++.|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 181 ~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 181 EQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred HHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9885 4789999999998765 599999999999999999999864
No 271
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.85 E-value=4.3e-21 Score=198.70 Aligned_cols=160 Identities=23% Similarity=0.366 Sum_probs=124.2
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC------C----------------cHHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY------A----------------PEAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~------~----------------~~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||+|++||+++|+||||||||||+++|.|+... . ....++.++|++|++.+|..++.
T Consensus 64 is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~tv~ 143 (305)
T PRK14264 64 VSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNLVELRKRVGMVFQSPNPFPKSIR 143 (305)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccHHHHhhceEEEccCCccccccHH
Confidence 8999999999999999999999999999876320 0 11245689999999987766555
Q ss_pred cccccccCCC-------------------CCCHHHHHHHHHHccch--------hhHhhCCcccccccc-----------
Q 047286 144 EGQYIPYGKQ-------------------NASDEHIRPAVQLANAE--------KSIDKLPLGLDTVVA----------- 185 (632)
Q Consensus 144 ~~~~i~~~~~-------------------~~~~~~~~~~~~~~~l~--------~~i~~l~~g~~~~v~----------- 185 (632)
+ |+.++.. ....+++.++++.+++. .....||+|..++++
T Consensus 144 e--nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~LAraL~~~p~l 221 (305)
T PRK14264 144 E--NISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLDDNALGLSGGQQQRLCIARCLAVDPEV 221 (305)
T ss_pred H--HHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhcCccccCCHHHHHHHHHHHHHhcCCCE
Confidence 5 4543210 01123456667766652 335678899888773
Q ss_pred ------cCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeE-EEEeCCeEEEecChhHHhcCC
Q 047286 186 ------TNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCI-IMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 186 ------ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i-~vl~~G~i~~~g~~~el~~~~ 247 (632)
|++||+.+++.+.+.|+++.++.|+|++||++..+.. ||++ ++|++|++++.|+++++.+.+
T Consensus 222 LLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 222 ILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTGGELVEYDDTDKIFENP 291 (305)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecCCEEEEeCCHHHHHhCc
Confidence 8999999999999999998777899999999999765 9997 578999999999999987543
No 272
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.85 E-value=3.7e-21 Score=196.18 Aligned_cols=160 Identities=23% Similarity=0.383 Sum_probs=124.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCc--ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPI--FLFCDFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~--~~~~~~~~~~~ 147 (632)
.+||++++||+++|+||||||||||+++|.|+... ++..+++.++|++|++. ++..++.+ |
T Consensus 27 ~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e--n 104 (271)
T PRK13632 27 NVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVED--D 104 (271)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHHH--H
Confidence 39999999999999999999999999999865321 11235678999999983 33345555 5
Q ss_pred cccCCC--CCCH----HHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHH
Q 047286 148 IPYGKQ--NASD----EHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAA 200 (632)
Q Consensus 148 i~~~~~--~~~~----~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~ 200 (632)
+.++.. .... +++.++++..++.+. +..||+|+.+++ +|++||+.+++.+.+.
T Consensus 105 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~ 184 (271)
T PRK13632 105 IAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKI 184 (271)
T ss_pred HHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 654321 1122 235667777777544 456888888777 3999999999999999
Q ss_pred HHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHhcC
Q 047286 201 MVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 201 l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|+++.+ ++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 185 l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 185 MVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999853 4899999999998878999999999999999999887653
No 273
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.85 E-value=3.9e-21 Score=195.61 Aligned_cols=165 Identities=17% Similarity=0.295 Sum_probs=123.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCcc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPIF-LFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~~-~~~~~~~~~~i 148 (632)
.+||++++||+++|+||||||||||+++|+|+.... ....++.++|++|++.. +....+..+++
T Consensus 31 ~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l 110 (267)
T PRK15112 31 PLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPRQRISQIL 110 (267)
T ss_pred eeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchhhHhccEEEEecCchhhcCcchhHHHHH
Confidence 399999999999999999999999999998653211 11224579999999742 22222222233
Q ss_pred ccC---CC----CCCHHHHHHHHHHccch-h----hHhhCCcccccccc-----------------cCCCCHHHHHHHHH
Q 047286 149 PYG---KQ----NASDEHIRPAVQLANAE-K----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQA 199 (632)
Q Consensus 149 ~~~---~~----~~~~~~~~~~~~~~~l~-~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~ 199 (632)
.+. .. ....+++.++++.+++. + .+..||.|+.++++ |++||+.+++.+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~ 190 (267)
T PRK15112 111 DFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLIN 190 (267)
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHH
Confidence 221 00 11134567788888873 3 24678999988773 99999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 200 AMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
.|.++.+ +.|+|++||+++.+.. ||++++|++|++++.|+++++...+..
T Consensus 191 ~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 243 (267)
T PRK15112 191 LMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVLASPLH 243 (267)
T ss_pred HHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHhcCCCC
Confidence 9999853 7899999999999876 999999999999999999998765433
No 274
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=99.85 E-value=2.3e-21 Score=191.44 Aligned_cols=148 Identities=25% Similarity=0.273 Sum_probs=115.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---H-hhcceEEEcccCccccc-cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---A-EQEKIGLVSKEPIFLFC-DFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~-~r~~i~~v~Q~~~~~~~-~~~~ 144 (632)
.+||++++|++++|+||||||||||+++|.|+.... +. . .++.++|++|++.+|.. ++.+
T Consensus 22 ~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e 101 (218)
T cd03255 22 GVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDLTALE 101 (218)
T ss_pred eeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCCCcHHH
Confidence 399999999999999999999999999998653211 00 0 24579999999876654 5554
Q ss_pred ccccccCCC--CC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 145 GQYIPYGKQ--NA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~~--~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.++.. .. ..+++.++++..++.+ .+.+||+|+.+++ +|++||+.+++.+
T Consensus 102 --~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l 179 (218)
T cd03255 102 --NVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEV 179 (218)
T ss_pred --HHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHH
Confidence 5554321 11 1345677888877654 4567899998887 3999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeE
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKI 234 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i 234 (632)
.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 180 ~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 180 MELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999854 7899999999988878999999999974
No 275
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=99.85 E-value=2.6e-21 Score=190.46 Aligned_cols=152 Identities=22% Similarity=0.339 Sum_probs=116.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCcccc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLF-CDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~ 150 (632)
.+||+|++||+++|+||||||||||+++|.|+..... ...++.++|++|++.++. .++.+ |+.+
T Consensus 18 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~l~~ 95 (213)
T cd03301 18 DLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVYD--NIAF 95 (213)
T ss_pred ceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEecChhhccCCCHHH--HHHH
Confidence 3999999999999999999999999999986532110 012356999999987664 35544 5544
Q ss_pred CCC--CCC----HHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ--NAS----DEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~--~~~----~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~ 203 (632)
+.. ... .+++.++++..++.+. +.+||.|+++++ +|++||+.+++.+.+.|++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~ 175 (213)
T cd03301 96 GLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKR 175 (213)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 311 111 2345667777776543 557889988877 3999999999999999999
Q ss_pred HhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 204 LVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
+.+ +.|+|++||++..+.. ||++++|++|++++.|
T Consensus 176 ~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 176 LQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 853 7899999999988765 9999999999998765
No 276
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=99.85 E-value=2.5e-21 Score=190.55 Aligned_cols=151 Identities=21% Similarity=0.319 Sum_probs=115.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------cHHhhcceEEEcccCcc---cccccccccccccC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------PEAEQEKIGLVSKEPIF---LFCDFNEGQYIPYG 151 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------~~~~r~~i~~v~Q~~~~---~~~~~~~~~~i~~~ 151 (632)
.+||++++||+++|+||||||||||+++|.|+.... ....++.++|++|++.+ +..++.+ |+.+.
T Consensus 17 ~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~~~~~~tv~e--~l~~~ 94 (213)
T cd03235 17 DVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSIDRDFPISVRD--VVLMG 94 (213)
T ss_pred cceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccccccCCCCcHHH--HHHhc
Confidence 399999999999999999999999999998653211 11246789999999865 2234444 55443
Q ss_pred CC----------CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHH
Q 047286 152 KQ----------NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAA 200 (632)
Q Consensus 152 ~~----------~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~ 200 (632)
.. ....+++.++++..++.+ .+.+||+|+.+++ +|++||+.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~ 174 (213)
T cd03235 95 LYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYEL 174 (213)
T ss_pred cccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 21 012345677888877754 3567888988877 3999999999999999
Q ss_pred HHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 201 MVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 201 l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
|+++. ++.|+|++||+++.+.. ||++++|++| +++.|
T Consensus 175 l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 175 LRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99985 57899999999998865 9999999886 55543
No 277
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.85 E-value=6.4e-21 Score=190.40 Aligned_cols=161 Identities=20% Similarity=0.329 Sum_probs=124.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCcccc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLF-CDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~ 150 (632)
.++|++++||+++|+||||||||||+++|.|...... ...++.++|++|++.+|. .+..+ |+.+
T Consensus 17 ~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e--~l~~ 94 (235)
T cd03299 17 NVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK--NIAY 94 (235)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH--HHHH
Confidence 3999999999999999999999999999986532111 113568999999987664 35544 5544
Q ss_pred CCC--CC----CHHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHH
Q 047286 151 GKQ--NA----SDEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~~--~~----~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~ 203 (632)
... .. ..+++.++++.+++.+. +.+||.|..++++ |++||+.+++.+.+.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~ 174 (235)
T cd03299 95 GLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKK 174 (235)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHH
Confidence 311 11 22345677777776544 4568888887773 999999999999999999
Q ss_pred HhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCC
Q 047286 204 LVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
+.. +.|+|++||++..+.. ||++++|++|++++.|+++++...+
T Consensus 175 ~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 175 IRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 753 7899999999998765 9999999999999999999887653
No 278
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.85 E-value=3.3e-21 Score=189.33 Aligned_cols=151 Identities=19% Similarity=0.336 Sum_probs=117.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCccccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~ 149 (632)
.+||++++| +++|+||||||||||+++|.|+.... +...++.++|++|++.+|.. ++.+ |+.
T Consensus 18 ~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~l~ 94 (211)
T cd03264 18 GVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVRE--FLD 94 (211)
T ss_pred ceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEecCCCcccccCCHHH--HHH
Confidence 399999999 99999999999999999998653210 12346789999999986653 5444 554
Q ss_pred cCC-----C-CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHH
Q 047286 150 YGK-----Q-NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~~-----~-~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~ 202 (632)
+.. . ....+++.++++..++.+ .+.+||+|+.+++ +|++||+.+++.+.+.|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~ 174 (211)
T cd03264 95 YIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLS 174 (211)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHH
Confidence 321 1 111345677788777654 4667899998877 389999999999999999
Q ss_pred HHhCCceEEEEecCchHHh-hcCeEEEEeCCeEEEec
Q 047286 203 KLVTNQTVVIVANCLITIR-NADCIIMVSKGKIVEKG 238 (632)
Q Consensus 203 ~~~~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g 238 (632)
++.++.|+|++||+++.+. .||++++|++|++++.|
T Consensus 175 ~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 175 ELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9877799999999999886 49999999999998764
No 279
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=99.85 E-value=3.5e-21 Score=194.20 Aligned_cols=169 Identities=24% Similarity=0.356 Sum_probs=131.1
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC-------CC-------C---cHHhhcceEEEcccCcc-cccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFR-------FY-------A---PEAEQEKIGLVSKEPIF-LFCDFNEGQY 147 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~-------~~-------~---~~~~r~~i~~v~Q~~~~-~~~~~~~~~~ 147 (632)
+||++++||.++|||+||||||||-..|..+. |. . -..+|+++-+|||||+- ++..++..+.
T Consensus 306 isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qI 385 (534)
T COG4172 306 ISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQI 385 (534)
T ss_pred ceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcCceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHH
Confidence 99999999999999999999999988775321 10 1 11268899999999951 2222222212
Q ss_pred cccC----CCC----CCHHHHHHHHHHccchh-----hHhhCCcccccccc-----------------cCCCCHHHHHHH
Q 047286 148 IPYG----KQN----ASDEHIRPAVQLANAEK-----SIDKLPLGLDTVVA-----------------TNAVDAQSERIV 197 (632)
Q Consensus 148 i~~~----~~~----~~~~~~~~~~~~~~l~~-----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i 197 (632)
|.-| .+. ..++++.++++.++++. +..++++|..++++ ||+||...+.++
T Consensus 386 I~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQv 465 (534)
T COG4172 386 IEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATRNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQV 465 (534)
T ss_pred hhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHhhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHH
Confidence 2211 111 23466788888898764 44567789988884 999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHH
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQL 254 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~ 254 (632)
.+.++++.+ +-+-++||||+..++. ||+|+||++|+|+|+|+.++++.+|...|.+-
T Consensus 466 v~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 466 LDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred HHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 999999853 6799999999999986 99999999999999999999999999888753
No 280
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.85 E-value=4.3e-21 Score=194.22 Aligned_cols=159 Identities=16% Similarity=0.233 Sum_probs=121.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH-hhcceEEEcccCccccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA-EQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~-~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
.+||++++|++++|+||||||||||+++|.|+.... +.. .+..++|++|++.++.. ++.+ |
T Consensus 23 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--n 100 (255)
T PRK11300 23 NVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREMTVIE--N 100 (255)
T ss_pred eeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCCcHHH--H
Confidence 399999999999999999999999999998653211 111 23458999999986653 5544 5
Q ss_pred cccCCC-----------------C-C---CHHHHHHHHHHccch----hhHhhCCccccccc-----------------c
Q 047286 148 IPYGKQ-----------------N-A---SDEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------A 185 (632)
Q Consensus 148 i~~~~~-----------------~-~---~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ 185 (632)
+.++.. . . ..+++.++++..++. .....||.|..+++ +
T Consensus 101 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP 180 (255)
T PRK11300 101 LLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQAGNLAYGQQRRLEIARCMVTQPEILMLDEP 180 (255)
T ss_pred HHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 544210 0 0 113455666776664 34667899998877 3
Q ss_pred cCCCCHHHHHHHHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 186 TNAVDAQSERIVQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 186 ts~LD~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
|++||+.+++.+.+.|.++.+ +.|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 181 t~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 243 (255)
T PRK11300 181 AAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIRN 243 (255)
T ss_pred ccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHHHhh
Confidence 999999999999999998853 6899999999998865 99999999999999999988764
No 281
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=99.85 E-value=7.7e-21 Score=192.11 Aligned_cols=164 Identities=22% Similarity=0.258 Sum_probs=124.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----CcH------------H-hhcceEEEcccCc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----APE------------A-EQEKIGLVSKEPI-FLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----~~~------------~-~r~~i~~v~Q~~~-~~~~~~~~~~ 146 (632)
.+||++++||+++|+||||||||||+++|.|+... ... . .++.++|++|++. .|....+..+
T Consensus 21 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~ 100 (254)
T PRK10418 21 GVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLHTMHT 100 (254)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccccHHH
Confidence 39999999999999999999999999999976322 111 1 1356999999984 2332222111
Q ss_pred ccc-----cCCCCCCHHHHHHHHHHccchh-------hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 147 YIP-----YGKQNASDEHIRPAVQLANAEK-------SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 147 ~i~-----~~~~~~~~~~~~~~~~~~~l~~-------~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
++. ++. ....+++.++++.+++.+ ....||.|..+++ +|++||+.+++.+
T Consensus 101 ~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l 179 (254)
T PRK10418 101 HARETCLALGK-PADDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARI 179 (254)
T ss_pred HHHHHHHHcCC-ChHHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHH
Confidence 221 121 123456778888887654 3567899998877 3999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCc
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEG 249 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~ 249 (632)
.+.|+++.+ +.|+|++||+++.+. .||++++|++|++++.|+.+++.+.+..
T Consensus 180 ~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~ 234 (254)
T PRK10418 180 LDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFNAPKH 234 (254)
T ss_pred HHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCCCC
Confidence 999998753 689999999999886 5999999999999999999998765444
No 282
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=99.85 E-value=4.6e-21 Score=194.02 Aligned_cols=159 Identities=21% Similarity=0.297 Sum_probs=123.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFL-FCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~-~~~~~~~~~i 148 (632)
.+||++++||+++|+||||||||||+++|.|+... .+...++.++|++|++.++ ..++.+ |+
T Consensus 19 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--~l 96 (256)
T TIGR03873 19 GVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLTVRD--VV 96 (256)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEecccCccCCCCCHHH--HH
Confidence 39999999999999999999999999999865321 1123456799999998533 234444 55
Q ss_pred ccCCC--------C--CCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 149 PYGKQ--------N--ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 149 ~~~~~--------~--~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
.++.. . ...+++.++++.+++.+ .+..||.|..+++ +|++||+.+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l 176 (256)
T TIGR03873 97 ALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLET 176 (256)
T ss_pred HhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHH
Confidence 44311 0 11235677788877654 3567888988777 3999999999999
Q ss_pred HHHHHHHhC-CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 198 QAAMVKLVT-NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 198 ~~~l~~~~~-~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
.+.|+++.+ +.|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 177 ~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 177 LALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 999999864 689999999999985 599999999999999999988753
No 283
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=99.85 E-value=5.8e-21 Score=194.17 Aligned_cols=159 Identities=23% Similarity=0.334 Sum_probs=123.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLF-CDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i 148 (632)
.+||++++|++++|+||||||||||+++|+|.... .+...++.++|++|++.++. .++.+ |+
T Consensus 25 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~--~~ 102 (265)
T PRK10253 25 NLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQE--LV 102 (265)
T ss_pred ecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCcHHH--HH
Confidence 39999999999999999999999999999865321 11223567999999987654 24443 45
Q ss_pred ccCC-C---------CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 149 PYGK-Q---------NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 149 ~~~~-~---------~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
.++. . ....+++.++++..++.+ .+..||+|..+++ +|++||+.+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l 182 (265)
T PRK10253 103 ARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDL 182 (265)
T ss_pred HhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHH
Confidence 4321 0 011235667788777654 4667888988877 3899999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
.+.|.++.+ +.|+|++||++..+. .||++++|++|++++.|+++++..
T Consensus 183 ~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 183 LELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 999999853 689999999998775 599999999999999999988754
No 284
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.85 E-value=5.7e-21 Score=187.89 Aligned_cols=153 Identities=27% Similarity=0.330 Sum_probs=118.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------cHHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||++++|++++|+||||||||||+++|.|..... ....++.++|++|++.+|.. ++.+ |+.+
T Consensus 16 ~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e--n~~~ 93 (213)
T TIGR01277 16 EFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ--NIGL 93 (213)
T ss_pred eeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH--HHHh
Confidence 499999999999999999999999999998653211 01245679999999986653 5555 5543
Q ss_pred CC-C--C---CCHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHH
Q 047286 151 GK-Q--N---ASDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~-~--~---~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~ 203 (632)
.. . . ...+++.++++..++.+. ...||.|+.+++ +|++||+.+++.+.+.|++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~ 173 (213)
T TIGR01277 94 GLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQ 173 (213)
T ss_pred HhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHH
Confidence 21 1 1 123456778888877544 456778887777 3999999999999999999
Q ss_pred HhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecC
Q 047286 204 LVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGT 239 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~ 239 (632)
+.+ +.|+|++||+...+.. ||++++|++|++++.|.
T Consensus 174 ~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 174 LCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 853 6899999999998764 99999999999998874
No 285
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.85 E-value=3.9e-21 Score=176.45 Aligned_cols=161 Identities=20% Similarity=0.380 Sum_probs=127.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC---------------CCCcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFR---------------FYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~---------------~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
++|++|++|.+++|+||||+|||||+.+++.+. .++..++.+.++.+-|+.. +...++..+.+.
T Consensus 19 ~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~-i~~rlTV~dLv~ 97 (252)
T COG4604 19 DVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKLSILKQENH-INSRLTVRDLVG 97 (252)
T ss_pred cceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHHHHHHhhch-hhheeEHHHHhh
Confidence 399999999999999999999999999987332 2334456777888888875 444444444555
Q ss_pred cCCCC--------CCHHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHH
Q 047286 150 YGKQN--------ASDEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAA 200 (632)
Q Consensus 150 ~~~~~--------~~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~ 200 (632)
||+-. .+...+.++++..++. +++++|++|..++. +.++||.+....+++.
T Consensus 98 FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryLd~LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~ 177 (252)
T COG4604 98 FGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYLDELSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKI 177 (252)
T ss_pred cCCCcccCCCCchHHHHHHHHHHHHhcccchHHHhHHhcccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHH
Confidence 65421 2334567777776653 57899999998765 2689999999999999
Q ss_pred HHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 201 MVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 201 l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
++++.+ ++|+++|-||...+.. +|+|+-|++|+++.+|+++|+++.
T Consensus 178 Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii~~ 226 (252)
T COG4604 178 LRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEIIQP 226 (252)
T ss_pred HHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHhcCH
Confidence 999864 7999999999998864 999999999999999999999864
No 286
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.85 E-value=1.9e-21 Score=191.16 Aligned_cols=119 Identities=24% Similarity=0.285 Sum_probs=90.4
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH--------------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI-------------------------- 539 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~-------------------------- 539 (632)
.+-+|.-++..||+|+||+|||||++++.++-.|++ +....+
T Consensus 25 vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~Nv 104 (339)
T COG1135 25 VSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRTVFENV 104 (339)
T ss_pred ceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHHHhhccEEeccccccccchHHhhh
Confidence 444677777889999999999999999999988854 111000
Q ss_pred -----HH---------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 540 -----II---------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 540 -----~~---------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
+. ...+.++- -|+.-.-+....+||||||||++||||+..
T Consensus 105 A~PLeiag~~k~ei~~RV~elLel--VgL~dk~~~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~ 182 (339)
T COG1135 105 AFPLELAGVPKAEIKQRVAELLEL--VGLSDKADRYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILE 182 (339)
T ss_pred hhhHhhcCCCHHHHHHHHHHHHHH--cCChhhhccCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHH
Confidence 00 11122211 145555556788999999999999999432
Q ss_pred -------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccC
Q 047286 582 -------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKIT 618 (632)
Q Consensus 582 -------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~ 618 (632)
++|||-++.++ -|||+.||++|+|||+|+-.++-.++
T Consensus 183 LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~P 233 (339)
T COG1135 183 LLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANP 233 (339)
T ss_pred HHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCc
Confidence 68899999997 49999999999999999999998864
No 287
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=99.85 E-value=5e-21 Score=190.99 Aligned_cols=153 Identities=18% Similarity=0.222 Sum_probs=118.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH---h-hcceEEEcccCccccc-cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA---E-QEKIGLVSKEPIFLFC-DFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~---~-r~~i~~v~Q~~~~~~~-~~~~ 144 (632)
.+||+|++||+++|+||||||||||+++|+|+.... +.. . ++.++|++|++.++.. ++.+
T Consensus 27 ~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e 106 (233)
T PRK11629 27 NVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALE 106 (233)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCCCHHH
Confidence 399999999999999999999999999998753211 111 1 2579999999876643 5554
Q ss_pred ccccccCC-----C-CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 145 GQYIPYGK-----Q-NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~-----~-~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.+.. . ....+++.++++..++.+ ...+||+|+++++ +|++||+.+++.+
T Consensus 107 --~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l 184 (233)
T PRK11629 107 --NVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 (233)
T ss_pred --HHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHH
Confidence 554321 1 112345677888887754 4567889998877 3999999999999
Q ss_pred HHHHHHHh--CCceEEEEecCchHHhhcCeEEEEeCCeEEEecC
Q 047286 198 QAAMVKLV--TNQTVVIVANCLITIRNADCIIMVSKGKIVEKGT 239 (632)
Q Consensus 198 ~~~l~~~~--~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~ 239 (632)
.+.|+++. +++|+|++||+++.+..+|++++|++|++++.++
T Consensus 185 ~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999984 3789999999999998888999999999998774
No 288
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.85 E-value=5e-21 Score=190.81 Aligned_cols=160 Identities=24% Similarity=0.329 Sum_probs=124.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||++++|++++|+||||||||||+++|.|...... ...++.++|++|++.+|.. ++.+ |+.+
T Consensus 18 ~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~--nl~~ 95 (232)
T cd03300 18 GVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVFE--NIAF 95 (232)
T ss_pred cceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEecccccCCCCcHHH--HHHH
Confidence 3999999999999999999999999999986532211 0135679999999987653 5544 4543
Q ss_pred CC--CCC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHH
Q 047286 151 GK--QNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 151 ~~--~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~ 203 (632)
.. ... ..+++.++++..++.+ .+..+|.|..+++ +|++||+.+++.+.+.|++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~ 175 (232)
T cd03300 96 GLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKR 175 (232)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 21 111 1345667777777654 3456788888777 3999999999999999999
Q ss_pred HhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 204 LVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+.+ +.|+|++||++..+.. ||++++|++|++++.|+++++...
T Consensus 176 ~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 176 LQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 864 7899999999998765 999999999999999999888654
No 289
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=99.85 E-value=8.3e-21 Score=192.39 Aligned_cols=168 Identities=22% Similarity=0.331 Sum_probs=123.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----------C-----c-----HH----hhcceEEEcccCc-ccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----------A-----P-----EA----EQEKIGLVSKEPI-FLF 139 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----------~-----~-----~~----~r~~i~~v~Q~~~-~~~ 139 (632)
.+||++++||+++|+||||||||||+++|.|+... + . .. .++.++|++|++. .+.
T Consensus 24 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 103 (258)
T PRK11701 24 DVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQHPRDGLR 103 (258)
T ss_pred eeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHHHHhhcceEEEeeCcccccC
Confidence 39999999999999999999999999999865321 1 0 01 1346999999974 222
Q ss_pred ccccccccccc-----CCCC--CCHHHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCC
Q 047286 140 CDFNEGQYIPY-----GKQN--ASDEHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 140 ~~~~~~~~i~~-----~~~~--~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
......+|+.+ .... ...+++.++++..++. .....||+|..++++ |++||
T Consensus 104 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD 183 (258)
T PRK11701 104 MQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLD 183 (258)
T ss_pred ccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 22222223321 1111 1133456677777664 335678899888773 99999
Q ss_pred HHHHHHHHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 191 AQSERIVQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
+.+++.+.+.|+++.+ +.|+|++||+++.+. .||++++|++|++++.|+++++...+...|.
T Consensus 184 ~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~~~~~~ 248 (258)
T PRK11701 184 VSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQVLDDPQHPYT 248 (258)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCCCCHHH
Confidence 9999999999998753 789999999999997 4999999999999999999998765444444
No 290
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=99.85 E-value=5e-21 Score=216.83 Aligned_cols=169 Identities=19% Similarity=0.253 Sum_probs=129.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---HhhcceEEEcccCc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---AEQEKIGLVSKEPI-FLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~~r~~i~~v~Q~~~-~~~~~~~~~ 145 (632)
.+||+|++||+++|+||||||||||+++|.|+.... +. .++++++|++|++. .++...+..
T Consensus 342 ~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~ 421 (623)
T PRK10261 342 KVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVG 421 (623)
T ss_pred eeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHH
Confidence 399999999999999999999999999998653210 01 13567999999973 223333333
Q ss_pred cccccCC---C----CCCHHHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCCHHHHHH
Q 047286 146 QYIPYGK---Q----NASDEHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVDAQSERI 196 (632)
Q Consensus 146 ~~i~~~~---~----~~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~ 196 (632)
+|+.+.. . ....+++.++++.+++. ..+.+||+|++++++ |++||+.++..
T Consensus 422 ~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~ 501 (623)
T PRK10261 422 DSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQ 501 (623)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 3443211 1 11124567788888874 245688899988883 99999999999
Q ss_pred HHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHH
Q 047286 197 VQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQ 253 (632)
Q Consensus 197 i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 253 (632)
+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++..++...|..
T Consensus 502 i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~ 561 (623)
T PRK10261 502 IINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTR 561 (623)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHH
Confidence 9999999853 6899999999998865 9999999999999999999998776777765
No 291
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.84 E-value=1e-20 Score=191.60 Aligned_cols=159 Identities=21% Similarity=0.307 Sum_probs=121.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFL-FCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~-~~~~~~~~~i 148 (632)
.+||++++|++++|+||||||||||+++|.|+... .+...++.++|++|++.++ ..++.+ |+
T Consensus 20 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--~l 97 (258)
T PRK13548 20 DVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFTVEE--VV 97 (258)
T ss_pred eeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCCHHH--HH
Confidence 39999999999999999999999999999875321 1122456799999998753 334444 55
Q ss_pred ccCCCC------CCHHHHHHHHHHccchh----hHhhCCccccccc-----------------------ccCCCCHHHHH
Q 047286 149 PYGKQN------ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------------ATNAVDAQSER 195 (632)
Q Consensus 149 ~~~~~~------~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------------~ts~LD~~~~~ 195 (632)
.++... ...+++.++++..++.+ .+.+||+|.++++ +|++||+.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~ 177 (258)
T PRK13548 98 AMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQH 177 (258)
T ss_pred HhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHH
Confidence 543211 11345667788877754 4567888875443 27899999999
Q ss_pred HHHHHHHHHh--CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 196 IVQAAMVKLV--TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 196 ~i~~~l~~~~--~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
.+.+.|+++. ++.|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 178 ~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 178 HVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 9999999885 4789999999999886 599999999999999999988764
No 292
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.84 E-value=8.3e-21 Score=183.17 Aligned_cols=161 Identities=24% Similarity=0.372 Sum_probs=134.3
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH-------------------HhhcceEEEcccCccccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE-------------------AEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~-------------------~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
++|+.+.-.++||-|+||||||||+|+|.|+...+.. ..+++|||||||.-+|. .++...
T Consensus 17 a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPdeG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFp-H~tVrg 95 (352)
T COG4148 17 ANFTLPARGITALFGPSGSGKTSLINMIAGLTRPDEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFP-HYTVRG 95 (352)
T ss_pred EeccCCCCceEEEecCCCCChhhHHHHHhccCCccccEEEECCEEeecccCCcccChhhheeeeEeecccccc-ceEEec
Confidence 7777777789999999999999999999876433211 14778999999997664 555556
Q ss_pred ccccCCCCCCHHHHHHHHHHccchhhHhh----CCcccccccc-----------------cCCCCHHHHHHHHHHHHHHh
Q 047286 147 YIPYGKQNASDEHIRPAVQLANAEKSIDK----LPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLV 205 (632)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~l~~~i~~----l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~ 205 (632)
|+.||.......+..++++..++.+.+++ |++|.+++|+ .++||...+++++-.++++.
T Consensus 96 NL~YG~~~~~~~~fd~iv~lLGI~hLL~R~P~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~ 175 (352)
T COG4148 96 NLRYGMWKSMRAQFDQLVALLGIEHLLDRYPGTLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLR 175 (352)
T ss_pred chhhhhcccchHhHHHHHHHhCcHHHHhhCCCccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHH
Confidence 89999877777888999999998776655 5578888885 68999999999999999997
Q ss_pred C--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCC
Q 047286 206 T--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 206 ~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
+ +..+++|||.++++.+ ||+|++|++|++.+.|..+++...+
T Consensus 176 ~e~~IPIlYVSHS~~Ev~RLAd~vV~le~GkV~A~g~~e~v~~~~ 220 (352)
T COG4148 176 DEINIPILYVSHSLDEVLRLADRVVVLENGKVKASGPLEEVWGSP 220 (352)
T ss_pred HhcCCCEEEEecCHHHHHhhhheEEEecCCeEEecCcHHHHhcCc
Confidence 5 5689999999988765 9999999999999999999998753
No 293
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.84 E-value=6.7e-21 Score=187.03 Aligned_cols=152 Identities=18% Similarity=0.318 Sum_probs=117.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-----------HHhhcceEEEcccCccccc-ccccccccccCC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-----------EAEQEKIGLVSKEPIFLFC-DFNEGQYIPYGK 152 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-----------~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~~~ 152 (632)
.+||++++|++++|+||||||||||+++|.|+..... ...++.++|++|++.++.. ++.+ |+.+..
T Consensus 18 ~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~~~~~~~tv~e--~l~~~~ 95 (210)
T cd03269 18 DISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEERGLYPKMKVID--QLVYLA 95 (210)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccCCcCCcCCcHHH--HHHHHH
Confidence 3899999999999999999999999999986532110 1245689999999876543 5544 444321
Q ss_pred C--C----CCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh
Q 047286 153 Q--N----ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV 205 (632)
Q Consensus 153 ~--~----~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~ 205 (632)
. . ...+++.++++..++.+ .+.+||.|+.+++ +|++||+.+++.+.+.|+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~ 175 (210)
T cd03269 96 QLKGLKKEEARRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELA 175 (210)
T ss_pred HHcCCChHHHHHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHH
Confidence 0 1 12345667777777653 4577999998877 399999999999999999875
Q ss_pred -CCceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 206 -TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 206 -~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
+++|+|++||++..+.. ||++++|++|++++.|
T Consensus 176 ~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 176 RAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 46899999999998865 9999999999998754
No 294
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=99.84 E-value=5.3e-21 Score=189.66 Aligned_cols=155 Identities=19% Similarity=0.259 Sum_probs=120.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|+... ++...++.++|++|++.++..++.+ |+.
T Consensus 25 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~~tv~e--nl~ 102 (225)
T PRK10247 25 NISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVSYCAQTPTLFGDTVYD--NLI 102 (225)
T ss_pred ccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccEEEecccccccccHHH--HHH
Confidence 39999999999999999999999999999875321 1223467899999999877665555 554
Q ss_pred cC----CCCCCHHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHH
Q 047286 150 YG----KQNASDEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVK 203 (632)
Q Consensus 150 ~~----~~~~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~ 203 (632)
+. ......+++.++++..++. .....||.|..+++ +|++||+.+++.+.+.|++
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~ 182 (225)
T PRK10247 103 FPWQIRNQQPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHR 182 (225)
T ss_pred hHHhhcCCChHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 32 1111244566788887764 23567888988877 3999999999999999999
Q ss_pred HhC--CceEEEEecCchHHhhcCeEEEEe-CCeEEEecChh
Q 047286 204 LVT--NQTVVIVANCLITIRNADCIIMVS-KGKIVEKGTHD 241 (632)
Q Consensus 204 ~~~--~~tviiitH~~~~~~~aD~i~vl~-~G~i~~~g~~~ 241 (632)
+.+ +.|+|++||+.+.++.||++++|+ ++..+++|+|+
T Consensus 183 ~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 183 YVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 853 789999999999988899999995 66777888775
No 295
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.84 E-value=5.2e-21 Score=189.40 Aligned_cols=149 Identities=21% Similarity=0.297 Sum_probs=114.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH---hh-cceEEEcccCcccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA---EQ-EKIGLVSKEPIFLF-CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~---~r-~~i~~v~Q~~~~~~-~~~~~ 144 (632)
.+||++++|++++|+||||||||||+++|+|..... +.. ++ +.++|++|++.++. .++.+
T Consensus 23 ~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~ 102 (221)
T TIGR02211 23 GVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDFTALE 102 (221)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCCCCcHHH
Confidence 399999999999999999999999999998653211 111 22 57999999987654 35544
Q ss_pred ccccccCC--CCC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 145 GQYIPYGK--QNA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~--~~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.+.. ... ..+++.++++..++++ ....||+|+.+++ +|++||+.+++.+
T Consensus 103 --~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l 180 (221)
T TIGR02211 103 --NVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKII 180 (221)
T ss_pred --HHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHH
Confidence 554321 011 1334667777777654 4567889988877 3999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEE
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIV 235 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~ 235 (632)
.+.|+++.+ ++|+|++||+++.+..||++++|++|+++
T Consensus 181 ~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 181 FDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999998853 68999999999988889999999999985
No 296
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=99.84 E-value=9.2e-21 Score=180.96 Aligned_cols=128 Identities=23% Similarity=0.384 Sum_probs=102.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCccccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLFCDFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~ 150 (632)
.+||++++||+++|+||||||||||+++|.|..... +...++.++|++|++.++..++.+ |+
T Consensus 20 ~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~--~i-- 95 (178)
T cd03247 20 NLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVLNQRPYLFDTTLRN--NL-- 95 (178)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEEccCCeeecccHHH--hh--
Confidence 399999999999999999999999999998653211 112467799999999776555444 43
Q ss_pred CCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 047286 151 GKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIV 213 (632)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviii 213 (632)
...||.|+.+++ +|++||+.+++.+.+.|+++.++.|+|++
T Consensus 96 ----------------------~~~LS~G~~qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~ 153 (178)
T cd03247 96 ----------------------GRRFSGGERQRLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWI 153 (178)
T ss_pred ----------------------cccCCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 234444444433 48999999999999999998778899999
Q ss_pred ecCchHHhhcCeEEEEeCCeEEEec
Q 047286 214 ANCLITIRNADCIIMVSKGKIVEKG 238 (632)
Q Consensus 214 tH~~~~~~~aD~i~vl~~G~i~~~g 238 (632)
||+...++.||++++|++|++++.|
T Consensus 154 sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 154 THHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred ecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999998889999999999998754
No 297
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.84 E-value=4.9e-21 Score=199.52 Aligned_cols=116 Identities=21% Similarity=0.230 Sum_probs=90.2
Q ss_pred EEEeeEEEEEecCCCChHHHHHhhhcCCCh-----hh---------hc-----HHHH------------------HHHH-
Q 047286 502 IVFEHTVALVGENGNGKSTVISLAERFHNP-----EQ---------VI-----YSWI------------------IIKC- 543 (632)
Q Consensus 502 I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~-----~~---------~~-----~~~~------------------~~~~- 543 (632)
|.-++++|||||||||||||+++|.|++++ ++ +. ...+ ..++
T Consensus 105 I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~ 184 (329)
T PRK14257 105 IKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVA 184 (329)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHH
Confidence 333458999999999999999999999863 11 00 0000 0011
Q ss_pred ------------------HHHHh--cCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 544 ------------------TNFIA--SLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 544 ------------------~~~i~--~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
.+.+. .|++++++.++++|.+||||||||+|||||+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i 264 (329)
T PRK14257 185 YGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKI 264 (329)
T ss_pred hHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHH
Confidence 01111 256677889999999999999999999999655
Q ss_pred -------------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -------------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -------------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++.++.. ||+|+||++|+|+|.|+++++...
T Consensus 265 ~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 265 EELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 789999999987 999999999999999999999875
No 298
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.84 E-value=5.4e-21 Score=186.79 Aligned_cols=124 Identities=24% Similarity=0.220 Sum_probs=93.5
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHHHHHHHHHHhcCCCccCc-ccccCCCCCCh
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWIIIKCTNFIASLPQGSDL-NVGERGLQLSG 567 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~~~~~~~~i~~lp~g~dt-~vge~G~~LSg 567 (632)
+|.-++++||||+|||||||+.++|.|+++|++ +........+.+.+... |+.. ...-....|||
T Consensus 35 ~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~~~~~~~~v~elL~~V--gl~~~~~~ryPhelSG 112 (268)
T COG4608 35 SIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLSKEERRERVLELLEKV--GLPEEFLYRYPHELSG 112 (268)
T ss_pred EEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcchhHHHHHHHHHHHHh--CCCHHHhhcCCcccCc
Confidence 444456999999999999999999999999975 11111112233333332 2333 23445678999
Q ss_pred HHHHHHHHHHHHhh-------------------------------------hccccchhhhhc-CCEEEEEeCCeEeeec
Q 047286 568 GLKQRIARTRARNY-------------------------------------CGCGSPPYHYKN-ADITSVVKNGVIAEKG 609 (632)
Q Consensus 568 GQrQRiaiARA~~~-------------------------------------~~iahrl~~~~~-aD~I~vl~~G~ive~G 609 (632)
||||||+||||+.. +.|+|.++.+++ ||+|.||..|+|||.|
T Consensus 113 GQrQRi~IARALal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g 192 (268)
T COG4608 113 GQRQRIGIARALALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIG 192 (268)
T ss_pred hhhhhHHHHHHHhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEec
Confidence 99999999999432 799999999985 9999999999999999
Q ss_pred ChHHHhccCCchhHHHH
Q 047286 610 RHDALMKITDGTYASLT 626 (632)
Q Consensus 610 ~h~eL~~~~~g~y~~l~ 626 (632)
+-+++..++.-.|-+..
T Consensus 193 ~~~~~~~~p~HpYTk~L 209 (268)
T COG4608 193 PTEEVFSNPLHPYTKAL 209 (268)
T ss_pred CHHHHhhCCCCHHHHHH
Confidence 99999987666666543
No 299
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=99.84 E-value=6.7e-21 Score=192.83 Aligned_cols=129 Identities=26% Similarity=0.289 Sum_probs=106.6
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cH--------------------------------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IY-------------------------------- 536 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~-------------------------------- 536 (632)
+|.-++.+||+|++|||||||+++|.|+++|++- ..
T Consensus 43 ~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~ 122 (257)
T cd03288 43 YIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCT 122 (257)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhhEEEECCCCcccccHHHHhcCcCCCCC
Confidence 4444568999999999999999999999876320 00
Q ss_pred ------HHHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------------
Q 047286 537 ------SWIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------------- 581 (632)
Q Consensus 537 ------~~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------------- 581 (632)
......+.+++..+|.|+++.+++.+.+||||||||++||||+..
T Consensus 123 ~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~ 202 (257)
T cd03288 123 DDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTA 202 (257)
T ss_pred HHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh
Confidence 000113456788889999999999999999999999999999654
Q ss_pred ------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHhh
Q 047286 582 ------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTALH 629 (632)
Q Consensus 582 ------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~~ 629 (632)
+++||+++.+..||+|++|++|+|++.|+++++++..++.|++++..+
T Consensus 203 ~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~ 256 (257)
T cd03288 203 FADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRTD 256 (257)
T ss_pred cCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhcc
Confidence 688999999999999999999999999999999986578899887654
No 300
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=99.84 E-value=8.9e-21 Score=190.53 Aligned_cols=158 Identities=17% Similarity=0.247 Sum_probs=118.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-----------------HH-hhcceEEEcccCccccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-----------------EA-EQEKIGLVSKEPIFLFC-DFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-----------------~~-~r~~i~~v~Q~~~~~~~-~~~~~ 145 (632)
.+||+|++||+++|+||||||||||+++|.|+..+.| .. .+..++|++|++.++.. +..+
T Consensus 18 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~- 96 (243)
T TIGR01978 18 GVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGVSNLE- 96 (243)
T ss_pred ccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccCCcCHHH-
Confidence 3899999999999999999999999999997621111 11 12348999999876543 2322
Q ss_pred cccccCC---C------CCC----HHHHHHHHHHccchh-----hHh-hCCccccccc-----------------ccCCC
Q 047286 146 QYIPYGK---Q------NAS----DEHIRPAVQLANAEK-----SID-KLPLGLDTVV-----------------ATNAV 189 (632)
Q Consensus 146 ~~i~~~~---~------~~~----~~~~~~~~~~~~l~~-----~i~-~l~~g~~~~v-----------------~ts~L 189 (632)
|+.+.. . ..+ .+++.++++..++.+ .+. .||+|+.+++ +|++|
T Consensus 97 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 175 (243)
T TIGR01978 97 -FLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQMALLEPKLAILDEIDSGL 175 (243)
T ss_pred -HHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHHHHHhcCCCEEEecCCcccC
Confidence 332210 0 011 244667777777642 233 4899998887 39999
Q ss_pred CHHHHHHHHHHHHHHh-CCceEEEEecCchHHhh--cCeEEEEeCCeEEEecChhHHh
Q 047286 190 DAQSERIVQAAMVKLV-TNQTVVIVANCLITIRN--ADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 190 D~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~--aD~i~vl~~G~i~~~g~~~el~ 244 (632)
|+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 176 D~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 176 DIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred CHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhc
Confidence 9999999999999986 47899999999998865 7999999999999999988654
No 301
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=99.84 E-value=5.3e-21 Score=195.25 Aligned_cols=123 Identities=26% Similarity=0.284 Sum_probs=91.8
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh----------------------------hcH----------HHH
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ----------------------------VIY----------SWI 539 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~----------------------------~~~----------~~~ 539 (632)
++-+|+=+++++|||||||||||++++|.||.+|++ ++. .+.
T Consensus 22 i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk 101 (338)
T COG3839 22 VNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLK 101 (338)
T ss_pred ceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHHhhhhhh
Confidence 333555556899999999999999999999998854 000 000
Q ss_pred ---------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------------
Q 047286 540 ---------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------------- 581 (632)
Q Consensus 540 ---------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------------- 581 (632)
.....+....| +++..+.....+||||||||+|||||+++
T Consensus 102 ~~~~~k~ei~~rV~eva~~L--~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~l 179 (338)
T COG3839 102 LRGVPKAEIDKRVKEVAKLL--GLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKL 179 (338)
T ss_pred hCCCchHHHHHHHHHHHHHc--CChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHH
Confidence 11222333222 56666667788999999999999999665
Q ss_pred --------hccccch-hhhhcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 --------CGCGSPP-YHYKNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 --------~~iahrl-~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
|.+||.. +.+--||||+||++|+|.+.|++.|+..++...|
T Consensus 180 h~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~f 229 (338)
T COG3839 180 HERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANLF 229 (338)
T ss_pred HHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccchh
Confidence 7889974 4556799999999999999999999998755443
No 302
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.84 E-value=7.7e-21 Score=186.77 Aligned_cols=147 Identities=28% Similarity=0.389 Sum_probs=113.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCc--ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPI--FLFCDFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~--~~~~~~~~~~~ 147 (632)
.+||++++|++++|+||||||||||+++|.|+... ++...++.++|++|++. ++..++.+ |
T Consensus 19 ~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~t~~~--~ 96 (211)
T cd03225 19 DISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVEE--E 96 (211)
T ss_pred ceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCCcHHH--H
Confidence 39999999999999999999999999999865321 11234678999999974 34445554 5
Q ss_pred cccCCC--CCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHH
Q 047286 148 IPYGKQ--NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAA 200 (632)
Q Consensus 148 i~~~~~--~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~ 200 (632)
+.++.. ... .+++.++++..++.+ .+..||+|+.+++ +|++||+.+++.+.+.
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~ 176 (211)
T cd03225 97 VAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLEL 176 (211)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH
Confidence 544211 111 234566777777654 4566888988877 3999999999999999
Q ss_pred HHHHhC-CceEEEEecCchHHhh-cCeEEEEeCCe
Q 047286 201 MVKLVT-NQTVVIVANCLITIRN-ADCIIMVSKGK 233 (632)
Q Consensus 201 l~~~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~ 233 (632)
|+++.+ +.|+|++||+++.+.. ||+|++|++|+
T Consensus 177 l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 177 LKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 998854 7899999999998876 99999999985
No 303
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=99.84 E-value=7.6e-21 Score=187.23 Aligned_cols=147 Identities=20% Similarity=0.273 Sum_probs=114.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---HhhcceEEEcccCcccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---AEQEKIGLVSKEPIFLF-CDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~~r~~i~~v~Q~~~~~~-~~~~~~ 145 (632)
.+||+|++|++++|+||||||||||+++|.|+.... +. ..++.++|++|++.+|. .++.+
T Consensus 20 ~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~- 98 (214)
T TIGR02673 20 DVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLPDRTVYE- 98 (214)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhccCCcHHH-
Confidence 399999999999999999999999999998653210 11 24567999999997664 35544
Q ss_pred cccccCC-----C-CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 146 QYIPYGK-----Q-NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~-----~-~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.+.. . ....+++.++++..++.+ .+..||+|+.+++ +|++||+.+++.+.
T Consensus 99 -~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~ 177 (214)
T TIGR02673 99 -NVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFPEQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERIL 177 (214)
T ss_pred -HHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHH
Confidence 554421 1 112345677888877754 3567889998877 39999999999999
Q ss_pred HHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCe
Q 047286 199 AAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGK 233 (632)
Q Consensus 199 ~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~ 233 (632)
+.|+++. +++|+|++||+++.+.. ||++++|++|+
T Consensus 178 ~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 178 DLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999985 47899999999998875 99999999985
No 304
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=99.84 E-value=2.3e-20 Score=185.43 Aligned_cols=148 Identities=34% Similarity=0.461 Sum_probs=111.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||+|++|++++|+||||||||||+++|.|+.... ....++.++|++|++.+|..++.+ |+.
T Consensus 32 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~~tv~~--nl~ 109 (226)
T cd03248 32 DVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHSKVSLVGQEPVLFARSLQD--NIA 109 (226)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHhhEEEEecccHHHhhhHHH--Hhc
Confidence 399999999999999999999999999998663211 112456799999999877666655 566
Q ss_pred cCCCCCCHHHH---------HHHHHHc--cch----hhHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 150 YGKQNASDEHI---------RPAVQLA--NAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 150 ~~~~~~~~~~~---------~~~~~~~--~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
++.......++ .+.++.. ++. .....||+|+.+++ +|++||+.+++.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l 189 (226)
T cd03248 110 YGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQV 189 (226)
T ss_pred cccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHH
Confidence 54332222222 2223333 332 23456777777766 3899999999999
Q ss_pred HHHHHHHhCCceEEEEecCchHHhhcCeEEEEeCCeE
Q 047286 198 QAAMVKLVTNQTVVIVANCLITIRNADCIIMVSKGKI 234 (632)
Q Consensus 198 ~~~l~~~~~~~tviiitH~~~~~~~aD~i~vl~~G~i 234 (632)
.+.++++.++.|+|++||+++.+..||+|++|++|++
T Consensus 190 ~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 190 QQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999998767899999999999888999999999974
No 305
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=99.84 E-value=2e-20 Score=188.21 Aligned_cols=159 Identities=20% Similarity=0.292 Sum_probs=121.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEEcccCccccc-ccccccccccCCCCCCHHH
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLVSKEPIFLFC-DFNEGQYIPYGKQNASDEH 159 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v~Q~~~~~~~-~~~~~~~i~~~~~~~~~~~ 159 (632)
.+||++++||+++|+||||||||||+++|+|+....... .+..++|++|++.++.. +.+..+++.+. .....++
T Consensus 22 ~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~~~i~~v~q~~~~~~~l~~~~~~~~~~~-~~~~~~~ 100 (251)
T PRK09544 22 DVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLR-PGTKKED 100 (251)
T ss_pred eEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCccCEEEeccccccccccChhHHHHHhcc-ccccHHH
Confidence 389999999999999999999999999999653222111 13469999999865432 11222233322 1234567
Q ss_pred HHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhC--CceEEEEecC
Q 047286 160 IRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVT--NQTVVIVANC 216 (632)
Q Consensus 160 ~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~--~~tviiitH~ 216 (632)
+.++++.+++.+ .+..||+|..+++ +|++||+.+++.+.+.|+++.+ +.|+|++||+
T Consensus 101 ~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~ 180 (251)
T PRK09544 101 ILPALKRVQAGHLIDAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHD 180 (251)
T ss_pred HHHHHHHcCChHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 788888888754 4567889988877 3999999999999999998853 7899999999
Q ss_pred chHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 217 LITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 217 ~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
++.+.. ||++++|++ ++++.|+++++..
T Consensus 181 ~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~ 209 (251)
T PRK09544 181 LHLVMAKTDEVLCLNH-HICCSGTPEVVSL 209 (251)
T ss_pred HHHHHHhCCEEEEECC-ceEeeCCHHHHhC
Confidence 998854 999999965 7999999999864
No 306
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=1.6e-20 Score=168.58 Aligned_cols=151 Identities=21% Similarity=0.275 Sum_probs=117.7
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH-------------------hhcceEEEcccCccccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA-------------------EQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~-------------------~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
+++.|++||.++||||||||||||+-++.|+...+..+ ..+++|+|+|...+ -.+++..+
T Consensus 29 V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~L-ip~ltAlE 107 (228)
T COG4181 29 VELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFHL-IPNLTALE 107 (228)
T ss_pred ceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHhhccceeEEEEeeec-cccchhhh
Confidence 99999999999999999999999999998764332111 24679999998654 34566555
Q ss_pred ccccCCC-----C-CCHHHHHHHHHHccchhhHh----hCCcccccccc-----------------cCCCCHHHHHHHHH
Q 047286 147 YIPYGKQ-----N-ASDEHIRPAVQLANAEKSID----KLPLGLDTVVA-----------------TNAVDAQSERIVQA 199 (632)
Q Consensus 147 ~i~~~~~-----~-~~~~~~~~~~~~~~l~~~i~----~l~~g~~~~v~-----------------ts~LD~~~~~~i~~ 199 (632)
|+..... . ...+..++.++.+++.+.+. +|++|.+++|+ |.+||..+.+.|.+
T Consensus 108 NV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaD 187 (228)
T COG4181 108 NVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIAD 187 (228)
T ss_pred hccchhhhcCCccccHHHHHHHHHHHhCcccccccCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHH
Confidence 7654321 1 12344667788888766554 55577888884 89999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeEEEe
Q 047286 200 AMVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKIVEK 237 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i~~~ 237 (632)
.+..+.. +.|.|+||||+....+|||++-|.+|+|+++
T Consensus 188 LlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 188 LLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 9988753 6899999999999999999999999999753
No 307
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=99.84 E-value=1e-20 Score=187.38 Aligned_cols=157 Identities=18% Similarity=0.351 Sum_probs=118.4
Q ss_pred EEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------cHHhhcceEEEcccCcccc-cccccccccccCC----
Q 047286 88 QHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIPYGK---- 152 (632)
Q Consensus 88 ~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~~~---- 152 (632)
|++++||+++|+||||||||||+++|.|....+ ....+++++|++|++.++. ...+..+|+.++.
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~ 80 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPGKGWRHIGYVPQRHEFAWDFPISVAHTVMSGRTGHI 80 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccchHhhCcEEEecccccccCCCCccHHHHHHhcccccc
Confidence 468999999999999999999999998653211 1123567999999986522 1222222443321
Q ss_pred -----CC-CCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh
Q 047286 153 -----QN-ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV 205 (632)
Q Consensus 153 -----~~-~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~ 205 (632)
.. ...+++.++++..++.+ .+.+||.|+.+++ +|++||+.+++.+.+.|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~ 160 (223)
T TIGR03771 81 GWLRRPCVADFAAVRDALRRVGLTELADRPVGELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQELLTELFIELA 160 (223)
T ss_pred ccccCCcHHHHHHHHHHHHHhCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH
Confidence 11 12345677888877654 4567889988877 399999999999999999885
Q ss_pred -CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 206 -TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 206 -~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
++.|+|++||+++.+.. ||+++++ +|++++.|+++++..
T Consensus 161 ~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~ 201 (223)
T TIGR03771 161 GAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQD 201 (223)
T ss_pred HcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcC
Confidence 47899999999998764 9999999 899999999998854
No 308
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=99.84 E-value=7.3e-21 Score=189.27 Aligned_cols=156 Identities=21% Similarity=0.266 Sum_probs=118.8
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH----------HhhcceEEEcccCcccc-cccccccccccCC--
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE----------AEQEKIGLVSKEPIFLF-CDFNEGQYIPYGK-- 152 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~----------~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~~~-- 152 (632)
+||++++||+++|+||||||||||+++|.|+...... ......+|++|++.++. .++.+ |+.+..
T Consensus 4 is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~l~~~~tv~e--~l~~~~~~ 81 (230)
T TIGR01184 4 VNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYSLLPWLTVRE--NIALAVDR 81 (230)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcccCCCCCHHH--HHHHHHHh
Confidence 8999999999999999999999999999865321111 01123589999987665 35544 554321
Q ss_pred --CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh
Q 047286 153 --QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV 205 (632)
Q Consensus 153 --~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~ 205 (632)
.... .+++.++++.+++.+ .+..||+|+++++ +|++||+.+++.+.+.|+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~ 161 (230)
T TIGR01184 82 VLPDLSKSERRAIVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIW 161 (230)
T ss_pred cccCCCHHHHHHHHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHH
Confidence 1122 234567788777654 4567899998887 399999999999999999875
Q ss_pred C--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 206 T--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 206 ~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
+ ++|+|++||+++.+.. ||++++|++|++++.|+..++
T Consensus 162 ~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 202 (230)
T TIGR01184 162 EEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEV 202 (230)
T ss_pred HhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceec
Confidence 3 6899999999998765 999999999999998876655
No 309
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=99.84 E-value=1e-20 Score=188.13 Aligned_cols=151 Identities=22% Similarity=0.280 Sum_probs=116.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHH---h-hcceEEEcccCccccc-cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEA---E-QEKIGLVSKEPIFLFC-DFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~---~-r~~i~~v~Q~~~~~~~-~~~~ 144 (632)
.+||++++||+++|+||||||||||+++|+|+.... +.. . ++.++|++|++.++.. ++.+
T Consensus 28 ~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~ 107 (228)
T PRK10584 28 GVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLIPTLNALE 107 (228)
T ss_pred ccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccCCCcCHHH
Confidence 389999999999999999999999999998763211 111 1 2579999999876553 4444
Q ss_pred ccccccCC--CC----CCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 145 GQYIPYGK--QN----ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~--~~----~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.+.. .. ...+++.++++..++.+ .+..||+|..+++ +|++||+.+++.+
T Consensus 108 --~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l 185 (228)
T PRK10584 108 --NVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKI 185 (228)
T ss_pred --HHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHH
Confidence 554321 11 12345677788887754 3566888888777 3999999999999
Q ss_pred HHHHHHHh-C-CceEEEEecCchHHhhcCeEEEEeCCeEEEe
Q 047286 198 QAAMVKLV-T-NQTVVIVANCLITIRNADCIIMVSKGKIVEK 237 (632)
Q Consensus 198 ~~~l~~~~-~-~~tviiitH~~~~~~~aD~i~vl~~G~i~~~ 237 (632)
.+.|+++. + +.|+|++||+++.+..||++++|++|++++.
T Consensus 186 ~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 186 ADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999985 3 6899999999998878999999999999764
No 310
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=99.84 E-value=1.8e-20 Score=186.47 Aligned_cols=152 Identities=24% Similarity=0.290 Sum_probs=113.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------Cc---HHhhcceEEEcccCcc-cc--cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------AP---EAEQEKIGLVSKEPIF-LF--CDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~---~~~r~~i~~v~Q~~~~-~~--~~~~ 143 (632)
.+||++++||+++|+||||||||||+++|.|.... ++ ...++.++|++|++.. +. .++.
T Consensus 23 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~ 102 (228)
T cd03257 23 DVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIG 102 (228)
T ss_pred CceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcCCcCCHH
Confidence 39999999999999999999999999999865321 00 2345689999999842 33 3444
Q ss_pred cccccccCC----CCCCHH---H-HHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCHHH
Q 047286 144 EGQYIPYGK----QNASDE---H-IRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDAQS 193 (632)
Q Consensus 144 ~~~~i~~~~----~~~~~~---~-~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~~~ 193 (632)
+ |+.+.. .....+ + ..+.++..++. ..+..||+|+.+++ +|++||+.+
T Consensus 103 ~--nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~ 180 (228)
T cd03257 103 E--QIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSV 180 (228)
T ss_pred H--HHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHH
Confidence 4 554321 111111 1 13556666653 34567899998877 399999999
Q ss_pred HHHHHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEec
Q 047286 194 ERIVQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKG 238 (632)
Q Consensus 194 ~~~i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g 238 (632)
++.+.+.|+++.+ ++|+|++||+++.+. .||++++|++|++++.|
T Consensus 181 ~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 181 QAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999854 789999999999887 59999999999998754
No 311
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.84 E-value=1.9e-20 Score=185.61 Aligned_cols=156 Identities=19% Similarity=0.316 Sum_probs=121.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH-----------HhhcceEEEcccCcccc-cccccccccccCC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE-----------AEQEKIGLVSKEPIFLF-CDFNEGQYIPYGK 152 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~-----------~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~~~ 152 (632)
.+||++++||+++|+||||||||||+++|.|....... ..++.++|++|++.++. .++.+ |+.+..
T Consensus 18 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~~~~~~~~t~~~--~~~~~~ 95 (223)
T TIGR03740 18 NISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIESPPLYENLTARE--NLKVHT 95 (223)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCCCCccccCCHHH--HHHHHH
Confidence 38999999999999999999999999999865321111 01247999999987654 35544 554321
Q ss_pred --CCCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-CCc
Q 047286 153 --QNASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-TNQ 208 (632)
Q Consensus 153 --~~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~~ 208 (632)
.....+++.++++..++++ ....||.|..+++ +|++||+.+++.+.+.|+++. ++.
T Consensus 96 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~ 175 (223)
T TIGR03740 96 TLLGLPDSRIDEVLNIVDLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGI 175 (223)
T ss_pred HHcCCCHHHHHHHHHHcCCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCC
Confidence 1224567778888887754 4567899998777 399999999999999999985 478
Q ss_pred eEEEEecCchHHh-hcCeEEEEeCCeEEEecChhH
Q 047286 209 TVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDE 242 (632)
Q Consensus 209 tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~e 242 (632)
|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 176 tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 176 TVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999885 599999999999999998764
No 312
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.84 E-value=3.8e-21 Score=182.24 Aligned_cols=161 Identities=17% Similarity=0.323 Sum_probs=126.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-----------HHhhcceEEEcccCcccccccccccccccC--
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-----------EAEQEKIGLVSKEPIFLFCDFNEGQYIPYG-- 151 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-----------~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~-- 151 (632)
++||++++|++++++|||||||||++++|.++..++. ...+.+|||+|.+-.++. .++..+.+.|.
T Consensus 20 ~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPEERGLy~-k~tv~dql~yla~ 98 (300)
T COG4152 20 NISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPEERGLYP-KMTVEDQLKYLAE 98 (300)
T ss_pred ceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChhhhccCc-cCcHHHHHHHHHH
Confidence 3999999999999999999999999999986543321 224668999999988653 33333344432
Q ss_pred CCCCCHH----HHHHHHHHcc----chhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-
Q 047286 152 KQNASDE----HIRPAVQLAN----AEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV- 205 (632)
Q Consensus 152 ~~~~~~~----~~~~~~~~~~----l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~- 205 (632)
....+.+ ++...++... ..+.+++|+.|.++.| ++|||||.+.+.+.+.+.+++
T Consensus 99 LkGm~~~e~~~~~~~wLer~~i~~~~~~kIk~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~ 178 (300)
T COG4152 99 LKGMPKAEIQKKLQAWLERLEIVGKKTKKIKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE 178 (300)
T ss_pred hcCCcHHHHHHHHHHHHHhccccccccchHHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh
Confidence 1223333 3444555544 3567999999998877 489999999999999999986
Q ss_pred CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 206 TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 206 ~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
+|.|||++||+++.++. ||+++.|++|+.|-+|+.+++.+.
T Consensus 179 ~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~ 220 (300)
T COG4152 179 EGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRS 220 (300)
T ss_pred cCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHh
Confidence 58999999999999976 999999999999999999998763
No 313
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=99.84 E-value=8.6e-21 Score=186.87 Aligned_cols=148 Identities=22% Similarity=0.297 Sum_probs=114.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c---HHhhcceEEEcccCccccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P---EAEQEKIGLVSKEPIFLFC-DFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~---~~~r~~i~~v~Q~~~~~~~-~~~~~ 145 (632)
.+||++++|++++|+||||||||||+++|.|+.... + ...++.++|++|++.++.. ++.+
T Consensus 19 ~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~- 97 (214)
T cd03292 19 GINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLPDRNVYE- 97 (214)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhccCCcHHH-
Confidence 399999999999999999999999999998653211 0 1245679999999976653 5554
Q ss_pred cccccCCC--CC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 146 QYIPYGKQ--NA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~~--~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.+... .. ..+++.++++.+++.+ ....||.|+.+++ +|++||+.+++.+.
T Consensus 98 -~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~ 176 (214)
T cd03292 98 -NVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIM 176 (214)
T ss_pred -HHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHH
Confidence 5554311 11 1345667777777654 3567888988877 39999999999999
Q ss_pred HHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeE
Q 047286 199 AAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKI 234 (632)
Q Consensus 199 ~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i 234 (632)
+.|+++. ++.|+|++||++..+.. ||++++|++|++
T Consensus 177 ~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 177 NLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999985 47899999999998875 999999999974
No 314
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.83 E-value=8.9e-21 Score=171.31 Aligned_cols=164 Identities=21% Similarity=0.309 Sum_probs=126.2
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------------------------C---cHHhhcceEEEcccCcc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------------------------A---PEAEQEKIGLVSKEPIF 137 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------------------------~---~~~~r~~i~~v~Q~~~~ 137 (632)
+|++-++|+.+.|+|.|||||||+++||.-+... + ...+|.++++|+|...+
T Consensus 25 vSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~L~mVFQ~FNL 104 (256)
T COG4598 25 VSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTRLGMVFQHFNL 104 (256)
T ss_pred eeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHHhhHhhhhcch
Confidence 9999999999999999999999999999522111 1 11267889999998654
Q ss_pred ccccccccccccc------CCC-CCCHHHHHHHHHHccchhhHhh----CCcccccccc-----------------cCCC
Q 047286 138 LFCDFNEGQYIPY------GKQ-NASDEHIRPAVQLANAEKSIDK----LPLGLDTVVA-----------------TNAV 189 (632)
Q Consensus 138 ~~~~~~~~~~i~~------~~~-~~~~~~~~~~~~~~~l~~~i~~----l~~g~~~~v~-----------------ts~L 189 (632)
+ ..++..+|+.- +.. ....++.+..+..+++.+.-+. |++|.+++++ ||+|
T Consensus 105 W-sHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~~LSGGQQQR~aIARaLameP~vmLFDEPTSAL 183 (256)
T COG4598 105 W-SHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYPAHLSGGQQQRVAIARALAMEPEVMLFDEPTSAL 183 (256)
T ss_pred h-HHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCccccCchHHHHHHHHHHHhcCCceEeecCCcccC
Confidence 3 33443334422 211 1123455667777888766555 4578877773 9999
Q ss_pred CHHHHHHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcH
Q 047286 190 DAQSERIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGA 250 (632)
Q Consensus 190 D~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~ 250 (632)
||+-..++++.++++. +|+|.+++||.+..++. +.+|++|++|.|-++|+|++++.+|...
T Consensus 184 DPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qvf~nP~S~ 246 (256)
T COG4598 184 DPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPEQVFGNPQSP 246 (256)
T ss_pred CHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCChHHHhcCCCCH
Confidence 9999999999999996 58999999999999988 8999999999999999999999886543
No 315
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.83 E-value=1.1e-20 Score=185.93 Aligned_cols=151 Identities=20% Similarity=0.280 Sum_probs=116.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------------cHHhhcceEEEcccCcccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------------------PEAEQEKIGLVSKEPIFLF-CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------------------~~~~r~~i~~v~Q~~~~~~-~~~~~ 144 (632)
.+||++++ |+++|+||||||||||+++|.|+.... ....++.++|++|++.++. .++.+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~ 94 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNVRE 94 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCHHH
Confidence 48999999 999999999999999999998653210 0123567999999997664 35544
Q ss_pred ccccccCCCC----CCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHH
Q 047286 145 GQYIPYGKQN----ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQA 199 (632)
Q Consensus 145 ~~~i~~~~~~----~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~ 199 (632)
|+.+.... ...+++.++++..++.+ ....||+|+++++ +|++||+.+++.+.+
T Consensus 95 --~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~ 172 (214)
T cd03297 95 --NLAFGLKRKRNREDRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLP 172 (214)
T ss_pred --HHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 55543211 12345677788877654 4567888988777 399999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEec
Q 047286 200 AMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKG 238 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g 238 (632)
.|+++.+ ++|+|++||+++.+. .||++++|++|++++.|
T Consensus 173 ~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 173 ELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999853 789999999999886 49999999999998765
No 316
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=99.83 E-value=1.8e-20 Score=195.68 Aligned_cols=74 Identities=22% Similarity=0.260 Sum_probs=61.8
Q ss_pred hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCC
Q 047286 171 KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKG 232 (632)
Q Consensus 171 ~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G 232 (632)
+....+++|...++ +|++||+.+..-+.+.|.+.... ++|+++|.-..+.. |.+|+.|+++
T Consensus 217 k~~~~~SgGwrmR~aLAr~Lf~kP~LLLLDEPtnhLDleA~~wLee~L~k~d~~-~lVi~sh~QDfln~vCT~Ii~l~~k 295 (614)
T KOG0927|consen 217 KKVKDLSGGWRMRAALARALFQKPDLLLLDEPTNHLDLEAIVWLEEYLAKYDRI-ILVIVSHSQDFLNGVCTNIIHLDNK 295 (614)
T ss_pred HHhhccCchHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHhccCc-eEEEEecchhhhhhHhhhhheeccc
Confidence 45678899988776 39999999999999888876433 89999999999976 9999999999
Q ss_pred e-EEEecChhHHhc
Q 047286 233 K-IVEKGTHDELIE 245 (632)
Q Consensus 233 ~-i~~~g~~~el~~ 245 (632)
+ +..+|++++...
T Consensus 296 kl~~y~Gnydqy~~ 309 (614)
T KOG0927|consen 296 KLIYYEGNYDQYVK 309 (614)
T ss_pred ceeeecCCHHHHhh
Confidence 9 667788887654
No 317
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=99.83 E-value=3.8e-20 Score=187.10 Aligned_cols=168 Identities=21% Similarity=0.330 Sum_probs=123.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC----------C----------cHH----hhcceEEEcccCcc-cc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY----------A----------PEA----EQEKIGLVSKEPIF-LF 139 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~----------~----------~~~----~r~~i~~v~Q~~~~-~~ 139 (632)
.+||+|++|++++|+||||||||||+++|+|+... + +.. .++.++|++|++.. +.
T Consensus 21 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 100 (253)
T TIGR02323 21 DVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVHQNPRDGLR 100 (253)
T ss_pred cceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHHHhhhcceEEEEeCcccccC
Confidence 38999999999999999999999999999865311 0 011 12469999999742 22
Q ss_pred cccccccccc-----cCCCC--CCHHHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCC
Q 047286 140 CDFNEGQYIP-----YGKQN--ASDEHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVD 190 (632)
Q Consensus 140 ~~~~~~~~i~-----~~~~~--~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD 190 (632)
......+|+. +.... ...+++.+.++..++. ..+..||+|+.++++ |++||
T Consensus 101 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD 180 (253)
T TIGR02323 101 MRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLD 180 (253)
T ss_pred ccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCC
Confidence 2222222332 11111 1234566677777664 245678999988873 99999
Q ss_pred HHHHHHHHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 191 AQSERIVQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
+.+++.+.+.|+++.+ +.|+|++||+++.+.. ||++++|++|++++.|+++++...+...|.
T Consensus 181 ~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~~~~~~~~~~~ 245 (253)
T TIGR02323 181 VSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQVLDDPQHPYT 245 (253)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHHHhcCCCCHHH
Confidence 9999999999998743 7899999999998875 999999999999999999998765444444
No 318
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.83 E-value=2.9e-20 Score=189.10 Aligned_cols=159 Identities=21% Similarity=0.253 Sum_probs=121.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-----------------------cHHhhcceEEEcccCcc-ccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-----------------------PEAEQEKIGLVSKEPIF-LFC 140 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-----------------------~~~~r~~i~~v~Q~~~~-~~~ 140 (632)
.+||+|++|++++|+||||||||||+++|.|+.... +...++.++|++|++.. +..
T Consensus 19 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~ 98 (272)
T PRK13547 19 DLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQPAFAF 98 (272)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCCCCCCC
Confidence 399999999999999999999999999998653221 11234568999999753 344
Q ss_pred ccccccccccCCC------C----CCHHHHHHHHHHccchh----hHhhCCccccccc----------------------
Q 047286 141 DFNEGQYIPYGKQ------N----ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV---------------------- 184 (632)
Q Consensus 141 ~~~~~~~i~~~~~------~----~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v---------------------- 184 (632)
++.+ |+.++.. . ...+++.++++..++.+ .+.+||+|+.+++
T Consensus 99 tv~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~~~~~~~~~~p~ll 176 (272)
T PRK13547 99 SARE--IVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARVQFARVLAQLWPPHDAAQPPRYL 176 (272)
T ss_pred cHHH--HHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhccccccccCCCCCEE
Confidence 5544 5544311 0 11234667777777654 4567888876544
Q ss_pred ----ccCCCCHHHHHHHHHHHHHHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 185 ----ATNAVDAQSERIVQAAMVKLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 185 ----~ts~LD~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+|++||+.+++.+.+.|+++.+ +.|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 177 lLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 177 LLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHGAPADVLT 244 (272)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEecCHHHHcC
Confidence 3889999999999999998853 689999999999886 599999999999999999988854
No 319
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=99.83 E-value=8.8e-21 Score=186.63 Aligned_cols=148 Identities=24% Similarity=0.289 Sum_probs=113.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-----------------CcHHhhcceEEEcccCcccc-ccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-----------------APEAEQEKIGLVSKEPIFLF-CDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-----------------~~~~~r~~i~~v~Q~~~~~~-~~~~~~~ 146 (632)
.+||++++|++++|+||||||||||+++|.|+... .....++.++|++|++.++. .++.+
T Consensus 18 ~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e-- 95 (213)
T cd03262 18 GIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPHLTVLE-- 95 (213)
T ss_pred CceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceEEecccccCCCCcHHH--
Confidence 38999999999999999999999999999865321 01124678999999997664 35544
Q ss_pred ccccCC---CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 147 YIPYGK---QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 147 ~i~~~~---~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.++. .... .+++.++++..++.+ .+..||+|+.+++ +|++||+.+++.+.
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~ 175 (213)
T cd03262 96 NITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVL 175 (213)
T ss_pred HHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHH
Confidence 554421 1111 234566777777643 4566888988777 39999999999999
Q ss_pred HHHHHHhC-CceEEEEecCchHHhh-cCeEEEEeCCeE
Q 047286 199 AAMVKLVT-NQTVVIVANCLITIRN-ADCIIMVSKGKI 234 (632)
Q Consensus 199 ~~l~~~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~i 234 (632)
+.|+++.+ ++|+|++||++..+.. ||++++|++|++
T Consensus 176 ~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 176 DVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999864 7899999999999865 999999999975
No 320
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=99.83 E-value=1.6e-20 Score=189.70 Aligned_cols=155 Identities=23% Similarity=0.322 Sum_probs=118.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH----------HhhcceEEEcccCcccc-cccccccccccCCC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE----------AEQEKIGLVSKEPIFLF-CDFNEGQYIPYGKQ 153 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~----------~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~~~~ 153 (632)
.+||+|++|++++|+||||||||||+++|+|+...... ..+..++|++|++.++. .++.+ |+.++..
T Consensus 19 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~~~~~~tv~e--~l~~~~~ 96 (255)
T PRK11248 19 DINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQNEGLLPWRNVQD--NVAFGLQ 96 (255)
T ss_pred eeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCCCccCCCCcHHH--HHHhHHH
Confidence 39999999999999999999999999999865322111 12245899999987654 35544 5544211
Q ss_pred --CCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-
Q 047286 154 --NAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV- 205 (632)
Q Consensus 154 --~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~- 205 (632)
... .+++.++++..++.+ ....||+|+.+++ +|++||+.+++.+.+.|+++.
T Consensus 97 ~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~ 176 (255)
T PRK11248 97 LAGVEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQ 176 (255)
T ss_pred HcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH
Confidence 111 245677788877654 4567899998877 399999999999999999973
Q ss_pred -CCceEEEEecCchHHhh-cCeEEEEe--CCeEEEecChh
Q 047286 206 -TNQTVVIVANCLITIRN-ADCIIMVS--KGKIVEKGTHD 241 (632)
Q Consensus 206 -~~~tviiitH~~~~~~~-aD~i~vl~--~G~i~~~g~~~ 241 (632)
.++|+|++||+++.+.. ||++++|+ +|++++.++.+
T Consensus 177 ~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 177 ETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred hcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 37899999999998865 99999998 59999887643
No 321
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=99.83 E-value=1.6e-20 Score=187.95 Aligned_cols=129 Identities=40% Similarity=0.534 Sum_probs=105.6
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHH---------------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSW--------------------------- 538 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~--------------------------- 538 (632)
..-+|.-++.+||+|++|||||||+++|.|++.|++. ....
T Consensus 21 isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~ 100 (237)
T cd03252 21 ISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFNRSIRDNIALAD 100 (237)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhccchHHHHhhccC
Confidence 3335555669999999999999999999999876320 0000
Q ss_pred ------HH------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 539 ------II------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 539 ------~~------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
.+ ..+.+++..+|.|+++.....+.+||||||||++||||+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ 180 (237)
T cd03252 101 PGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRN 180 (237)
T ss_pred CCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 00 13346778889999998888999999999999999999654
Q ss_pred ----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHH
Q 047286 582 ----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTA 627 (632)
Q Consensus 582 ----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~ 627 (632)
+++||.+..+..||+|++|++|++++.|+.++++++ .+.|+.++.
T Consensus 181 l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 181 MHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred HHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 678999999989999999999999999999999987 899998875
No 322
>PRK10908 cell division protein FtsE; Provisional
Probab=99.83 E-value=2.2e-20 Score=185.03 Aligned_cols=150 Identities=18% Similarity=0.217 Sum_probs=114.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---HhhcceEEEcccCcccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---AEQEKIGLVSKEPIFLF-CDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~~r~~i~~v~Q~~~~~~-~~~~~~ 145 (632)
.+||++++|++++|+||||||||||+++|.|+.... +. ..++.++|++|++.+++ .++.+
T Consensus 20 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~- 98 (222)
T PRK10908 20 GVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYD- 98 (222)
T ss_pred eeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhheEEEecCccccccccHHH-
Confidence 399999999999999999999999999998653211 01 13568999999987543 34544
Q ss_pred cccccCC--CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 146 QYIPYGK--QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~--~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.+.. .... .+++.++++..++.+ ...+||.|+.+++ +|++||+.+++.+.
T Consensus 99 -~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~ 177 (222)
T PRK10908 99 -NVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGIL 177 (222)
T ss_pred -HHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHH
Confidence 555431 1112 224556777777644 4567888988877 39999999999999
Q ss_pred HHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEE
Q 047286 199 AAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVE 236 (632)
Q Consensus 199 ~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~ 236 (632)
+.|+++. ++.|+|++||+++.+.. ||++++|++|+++.
T Consensus 178 ~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 178 RLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 9999885 46899999999999876 99999999999864
No 323
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=99.83 E-value=6.4e-20 Score=184.58 Aligned_cols=159 Identities=18% Similarity=0.279 Sum_probs=120.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--------------CcHHhhcceEEEcccCccc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--------------APEAEQEKIGLVSKEPIFL-FCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--------------~~~~~r~~i~~v~Q~~~~~-~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|+... ++...++.++|++|++.++ ..++.+ |+.
T Consensus 14 ~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~~--nl~ 91 (248)
T PRK03695 14 PLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPGSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVFQ--YLT 91 (248)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHHH--HHH
Confidence 39999999999999999999999999999865321 1123456699999997543 334444 554
Q ss_pred cCCCC-C----CHHHHHHHHHHccchh----hHhhCCccccccc------------------------ccCCCCHHHHHH
Q 047286 150 YGKQN-A----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV------------------------ATNAVDAQSERI 196 (632)
Q Consensus 150 ~~~~~-~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v------------------------~ts~LD~~~~~~ 196 (632)
+.... . ..+++.++++..++.+ .+..||.|+.+++ +|++||+.+++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~ 171 (248)
T PRK03695 92 LHQPDKTRTEAVASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAA 171 (248)
T ss_pred hcCccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHH
Confidence 43211 1 1345677788777754 3556777764332 278999999999
Q ss_pred HHHHHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 197 VQAAMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 197 i~~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+.+.|+++. ++.|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 172 l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 172 LDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred HHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 999999885 4789999999999775 599999999999999999988754
No 324
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=99.83 E-value=3.1e-20 Score=189.04 Aligned_cols=167 Identities=20% Similarity=0.208 Sum_probs=124.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c---HHhhcceEEEcccCcc-cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P---EAEQEKIGLVSKEPIF-LFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~---~~~r~~i~~v~Q~~~~-~~~~~~~~ 145 (632)
.+||++++|++++|+||||||||||+++|.|+.... + ...++.++|++|++.. |.......
T Consensus 30 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~ 109 (268)
T PRK10419 30 NVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVR 109 (268)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhccCCCCCHH
Confidence 399999999999999999999999999998653210 1 1246689999999842 33222222
Q ss_pred cccccC-----CCC--CCHHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCHHHHHH
Q 047286 146 QYIPYG-----KQN--ASDEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDAQSERI 196 (632)
Q Consensus 146 ~~i~~~-----~~~--~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~ 196 (632)
+++.+. ... ...+++.++++..++. .....+|.|..+++ +|++||+.+++.
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~ 189 (268)
T PRK10419 110 EIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAG 189 (268)
T ss_pred HHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHH
Confidence 233221 101 1123567777777764 24567889988877 399999999999
Q ss_pred HHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 197 VQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 197 i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
+.+.|+++.+ +.|+|++||++..+.. ||++++|++|++++.|+++++... ...|.
T Consensus 190 ~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~ 247 (268)
T PRK10419 190 VIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKLTF-SSPAG 247 (268)
T ss_pred HHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhccCC-CCHHH
Confidence 9999998853 7899999999999875 999999999999999999998754 44444
No 325
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=99.83 E-value=3.9e-20 Score=175.51 Aligned_cols=160 Identities=21% Similarity=0.283 Sum_probs=124.5
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------Cc-HHhhcceEEEcccCcccccccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------AP-EAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~-~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
+||++++||+++++|+||+|||||+++|+|+... +| ...|..|+||||...+|. .++..+|+.
T Consensus 22 vsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~-~LTVeENL~ 100 (237)
T COG0410 22 VSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP-RLTVEENLL 100 (237)
T ss_pred eeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeEeCcccccchh-hCcHHHHHh
Confidence 9999999999999999999999999999875321 11 225778999999987654 555556887
Q ss_pred cCCCC-----CCHHHHHHHHHHcc-----chhhHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHH
Q 047286 150 YGKQN-----ASDEHIRPAVQLAN-----AEKSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMV 202 (632)
Q Consensus 150 ~~~~~-----~~~~~~~~~~~~~~-----l~~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~ 202 (632)
++... .....++++.+..- .+..-..||+|.++.++ |.||-|.-.++|.+.|+
T Consensus 101 ~g~~~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~ 180 (237)
T COG0410 101 LGAYARRDKEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIK 180 (237)
T ss_pred hhhhcccccccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHH
Confidence 65221 11111445555432 23445678999988874 88999999999999999
Q ss_pred HHhC--CceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhcC
Q 047286 203 KLVT--NQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 203 ~~~~--~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
++++ +.||++|.++...+. .+||.++|++|+|+.+|+.+|+..+
T Consensus 181 ~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 181 ELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred HHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 9974 569999999997765 5999999999999999999999865
No 326
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.82 E-value=5.2e-20 Score=179.93 Aligned_cols=154 Identities=23% Similarity=0.352 Sum_probs=122.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHH
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAV 164 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 164 (632)
.|||+|++||+++|||+||||||||-++|. +...|.. ..|-|-.++ +.. + ......+++.+.+
T Consensus 31 ~Vsf~i~~ge~~glVGESG~GKSTlgr~i~--~L~~pt~--G~i~f~g~~-------i~~---~---~~~~~~~~v~elL 93 (268)
T COG4608 31 GVSFSIKEGETLGLVGESGCGKSTLGRLIL--GLEEPTS--GEILFEGKD-------ITK---L---SKEERRERVLELL 93 (268)
T ss_pred ceeEEEcCCCEEEEEecCCCCHHHHHHHHH--cCcCCCC--ceEEEcCcc-------hhh---c---chhHHHHHHHHHH
Confidence 399999999999999999999999999998 4454432 223222222 111 0 0122346688888
Q ss_pred HHccchh-----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHhC--CceEEEEecCchHH
Q 047286 165 QLANAEK-----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLVT--NQTVVIVANCLITI 220 (632)
Q Consensus 165 ~~~~l~~-----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~~--~~tviiitH~~~~~ 220 (632)
+.+++.+ +..++++|+.++++ +|+||...+.++.+.+.++.+ +-|.++||||++.+
T Consensus 94 ~~Vgl~~~~~~ryPhelSGGQrQRi~IARALal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv 173 (268)
T COG4608 94 EKVGLPEEFLYRYPHELSGGQRQRIGIARALALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVV 173 (268)
T ss_pred HHhCCCHHHhhcCCcccCchhhhhHHHHHHHhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhh
Confidence 8888654 34456778888883 899999999999999999864 78999999999999
Q ss_pred hh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHH
Q 047286 221 RN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLV 255 (632)
Q Consensus 221 ~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 255 (632)
++ ||||.||..|+|++.|+.+++..++.++|.+..
T Consensus 174 ~~isdri~VMy~G~iVE~g~~~~~~~~p~HpYTk~L 209 (268)
T COG4608 174 RYISDRIAVMYLGKIVEIGPTEEVFSNPLHPYTKAL 209 (268)
T ss_pred hhhcccEEEEecCceeEecCHHHHhhCCCCHHHHHH
Confidence 87 999999999999999999999999999998754
No 327
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.82 E-value=7.9e-20 Score=178.55 Aligned_cols=146 Identities=27% Similarity=0.379 Sum_probs=110.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH--hhcceEEEcccCcccccccccccccccCCCCCCHHHHHH
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA--EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRP 162 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~--~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 162 (632)
.+||+|++|++++|+||||||||||+++|.|+...+..+ +..+++|++|+|.++..++.+ |+.+... ...++..+
T Consensus 23 ~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~t~~e--nl~~~~~-~~~~~~~~ 99 (204)
T cd03250 23 DINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNGTIRE--NILFGKP-FDEERYEK 99 (204)
T ss_pred eeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccCcHHH--HhccCCC-cCHHHHHH
Confidence 399999999999999999999999999999653322221 223699999999988777666 6766532 23445566
Q ss_pred HHHHccchhhHhhC---------------Cccccccc-----------------ccCCCCHHHHHHHHH-HHHHHh-CCc
Q 047286 163 AVQLANAEKSIDKL---------------PLGLDTVV-----------------ATNAVDAQSERIVQA-AMVKLV-TNQ 208 (632)
Q Consensus 163 ~~~~~~l~~~i~~l---------------~~g~~~~v-----------------~ts~LD~~~~~~i~~-~l~~~~-~~~ 208 (632)
+++.+++.+.+..+ |.|..+++ +|++||+.+.+.+.+ .+++.. ++.
T Consensus 100 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~ 179 (204)
T cd03250 100 VIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNK 179 (204)
T ss_pred HHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCC
Confidence 66666666655544 44444444 389999999998887 456553 468
Q ss_pred eEEEEecCchHHhhcCeEEEEeCCe
Q 047286 209 TVVIVANCLITIRNADCIIMVSKGK 233 (632)
Q Consensus 209 tviiitH~~~~~~~aD~i~vl~~G~ 233 (632)
|+|++||++..+..||++++|++|+
T Consensus 180 tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 180 TRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999888899999999985
No 328
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=99.82 E-value=3.4e-20 Score=207.00 Aligned_cols=167 Identities=22% Similarity=0.311 Sum_probs=125.6
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--------------CcH---HhhcceEEEcccCc-ccccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--------------APE---AEQEKIGLVSKEPI-FLFCDFNEGQY 147 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--------------~~~---~~r~~i~~v~Q~~~-~~~~~~~~~~~ 147 (632)
+||+|++||+++|+||||||||||+++|.|+... ++. .++++++|++|++. .++...+..+|
T Consensus 305 isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~ 384 (529)
T PRK15134 305 ISFTLRPGETLGLVGESGSGKSTTGLALLRLINSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQI 384 (529)
T ss_pred ceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHH
Confidence 9999999999999999999999999999875310 001 12567999999973 12222233335
Q ss_pred cccCC------CCC--CHHHHHHHHHHccch-----hhHhhCCcccccccc-----------------cCCCCHHHHHHH
Q 047286 148 IPYGK------QNA--SDEHIRPAVQLANAE-----KSIDKLPLGLDTVVA-----------------TNAVDAQSERIV 197 (632)
Q Consensus 148 i~~~~------~~~--~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i 197 (632)
+.++. ... ..+++.++++..++. ..+.+||+|++++++ |++||+.+++.+
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l 464 (529)
T PRK15134 385 IEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQI 464 (529)
T ss_pred HHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHH
Confidence 54321 011 124566778877774 235688999998883 999999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
++.|+++.+ +.|+|++||++..+.. ||+|++|++|++++.|+++++.+.+...|.
T Consensus 465 ~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 522 (529)
T PRK15134 465 LALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQQEYT 522 (529)
T ss_pred HHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCCChHH
Confidence 999999853 6899999999998865 999999999999999999999766544443
No 329
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=99.82 E-value=3.6e-20 Score=175.96 Aligned_cols=121 Identities=24% Similarity=0.405 Sum_probs=97.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|.... .+...++.++|++|++.++..++.+ |+
T Consensus 20 ~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~--~l- 96 (173)
T cd03246 20 NVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGYLPQDDELFSGSIAE--NI- 96 (173)
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEEECCCCccccCcHHH--HC-
Confidence 39999999999999999999999999999865321 1123467899999999776655444 43
Q ss_pred cCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhC-CceEE
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVT-NQTVV 211 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~-~~tvi 211 (632)
||.|+.+++ +|++||+.+++.+.+.|+++.+ ++|+|
T Consensus 97 --------------------------LS~G~~qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii 150 (173)
T cd03246 97 --------------------------LSGGQRQRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRI 150 (173)
T ss_pred --------------------------cCHHHHHHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEE
Confidence 344443333 4899999999999999998854 78999
Q ss_pred EEecCchHHhhcCeEEEEeCCeE
Q 047286 212 IVANCLITIRNADCIIMVSKGKI 234 (632)
Q Consensus 212 iitH~~~~~~~aD~i~vl~~G~i 234 (632)
++||+++.+..||++++|++|++
T Consensus 151 ~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 151 VIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEeCCHHHHHhCCEEEEEECCCC
Confidence 99999998888999999999974
No 330
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=99.82 E-value=5.9e-20 Score=187.43 Aligned_cols=158 Identities=22% Similarity=0.311 Sum_probs=117.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH-----------Hh-hcceEEEcccCccc---ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE-----------AE-QEKIGLVSKEPIFL---FCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~-----------~~-r~~i~~v~Q~~~~~---~~~~~~~~~i~ 149 (632)
.+||+|++|++++|+||||||||||+++|+|+...... .. +..++|++|++.+. ..++.+ ++.
T Consensus 25 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q~~~~~~~~~~~~~~--~i~ 102 (272)
T PRK15056 25 DASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQSEEVDWSFPVLVED--VVM 102 (272)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEeccccccccCCCcchhh--hee
Confidence 39999999999999999999999999999865322110 11 23599999997542 112222 333
Q ss_pred cCC---------C-CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 150 YGK---------Q-NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 150 ~~~---------~-~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
++. . ....+++.++++..++.+ .+..||+|..+++ +|++||+.+++.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~ 182 (272)
T PRK15056 103 MGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIGELSGGQKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARII 182 (272)
T ss_pred cccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHH
Confidence 211 0 111334567777777654 4567888988877 39999999999999
Q ss_pred HHHHHHh-CCceEEEEecCchHHh-hcCeEEEEeCCeEEEecChhHHhc
Q 047286 199 AAMVKLV-TNQTVVIVANCLITIR-NADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 199 ~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+.|+++. +++|+|++||+++.+. .||+++++ +|++++.|+++++..
T Consensus 183 ~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~~ 230 (272)
T PRK15056 183 SLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTFT 230 (272)
T ss_pred HHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhccC
Confidence 9999985 4789999999998875 59999777 899999999998753
No 331
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=99.82 E-value=4e-20 Score=183.63 Aligned_cols=152 Identities=23% Similarity=0.350 Sum_probs=114.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---CC------------cHHhhcceEEEcccCccccc-cccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---YA------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---~~------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i 148 (632)
.+||++++||+++|+||||||||||+++|.|... .. ....++.++|++|++.+|.. ++.+ |+
T Consensus 25 ~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--nl 102 (226)
T cd03234 25 DVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVRE--TL 102 (226)
T ss_pred CceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcHHH--HH
Confidence 3999999999999999999999999999987643 11 11346789999999877654 5554 55
Q ss_pred ccCC-----CCCC----HHHHHH-HHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 149 PYGK-----QNAS----DEHIRP-AVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 149 ~~~~-----~~~~----~~~~~~-~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
.+.. .... ..++.+ .++..++.+ .+..||.|..+++ +|++||+.+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~ 182 (226)
T cd03234 103 TYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNL 182 (226)
T ss_pred HHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHH
Confidence 4321 1001 112333 566655543 4567899988877 3899999999999
Q ss_pred HHHHHHHh-CCceEEEEecCc-hHH-hhcCeEEEEeCCeEEEec
Q 047286 198 QAAMVKLV-TNQTVVIVANCL-ITI-RNADCIIMVSKGKIVEKG 238 (632)
Q Consensus 198 ~~~l~~~~-~~~tviiitH~~-~~~-~~aD~i~vl~~G~i~~~g 238 (632)
.+.++++. ++.|+|++||++ ..+ +.||++++|++|++++.|
T Consensus 183 ~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 183 VSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999875 478999999998 355 569999999999998765
No 332
>PLN03211 ABC transporter G-25; Provisional
Probab=99.82 E-value=2.9e-20 Score=210.45 Aligned_cols=180 Identities=18% Similarity=0.262 Sum_probs=135.3
Q ss_pred HHHHHHHHHHhccCCCCCC----C-C----CcEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------------
Q 047286 63 QAAACKMFETIERIPKINP----Y-D----NRFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA------------- 120 (632)
Q Consensus 63 ~~a~~ri~~~~~~~~~~~~----~-~----~~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~------------- 120 (632)
+.+++++..+++.++.... . . +++|+++++||+++|+||||||||||+++|+|.....
T Consensus 55 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~ 134 (659)
T PLN03211 55 KNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKP 134 (659)
T ss_pred cccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEEC
Confidence 4555777777776654321 1 1 2399999999999999999999999999998653221
Q ss_pred cHHhhcceEEEcccCcccc-cccccccccccCC-----CCCCH----HHHHHHHHHccchhh---------HhhCCcccc
Q 047286 121 PEAEQEKIGLVSKEPIFLF-CDFNEGQYIPYGK-----QNASD----EHIRPAVQLANAEKS---------IDKLPLGLD 181 (632)
Q Consensus 121 ~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~~~-----~~~~~----~~~~~~~~~~~l~~~---------i~~l~~g~~ 181 (632)
....+++++||+|++.++. .++.+ |+.+.. ...+. ++++++++..++.+. ...+|+|++
T Consensus 135 ~~~~~~~i~yv~Q~~~l~~~lTV~E--~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGer 212 (659)
T PLN03211 135 TKQILKRTGFVTQDDILYPHLTVRE--TLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCENTIIGNSFIRGISGGER 212 (659)
T ss_pred chhhccceEEECcccccCCcCCHHH--HHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhh
Confidence 1124567999999987664 35555 554421 11222 335667777777542 456999999
Q ss_pred ccc-----------------ccCCCCHHHHHHHHHHHHHHh-CCceEEEEecCchH-H-hhcCeEEEEeCCeEEEecChh
Q 047286 182 TVV-----------------ATNAVDAQSERIVQAAMVKLV-TNQTVVIVANCLIT-I-RNADCIIMVSKGKIVEKGTHD 241 (632)
Q Consensus 182 ~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~~tviiitH~~~~-~-~~aD~i~vl~~G~i~~~g~~~ 241 (632)
+++ +|++||+.++..+.+.|+++. +++|+|+++|+++. + +.+|++++|++|++++.|+++
T Consensus 213 qRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~ 292 (659)
T PLN03211 213 KRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGS 292 (659)
T ss_pred hHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHH
Confidence 888 399999999999999999986 57999999999973 4 569999999999999999999
Q ss_pred HHh
Q 047286 242 ELI 244 (632)
Q Consensus 242 el~ 244 (632)
++.
T Consensus 293 ~~~ 295 (659)
T PLN03211 293 DAM 295 (659)
T ss_pred HHH
Confidence 885
No 333
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=4.1e-20 Score=177.03 Aligned_cols=159 Identities=22% Similarity=0.337 Sum_probs=121.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEEcccCccccccccccccccc-----CCC-C
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLVSKEPIFLFCDFNEGQYIPY-----GKQ-N 154 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v~Q~~~~~~~~~~~~~~i~~-----~~~-~ 154 (632)
++||++++||.+||+|+||||||||+|+|.| .+.|+. .+.+++....-..-|.+.++..+|+.+ |.. .
T Consensus 45 disf~i~~Ge~vGiiG~NGaGKSTLlkliaG--i~~Pt~G~v~v~G~v~~li~lg~Gf~pelTGreNi~l~~~~~G~~~~ 122 (249)
T COG1134 45 DISFEIYKGERVGIIGHNGAGKSTLLKLIAG--IYKPTSGKVKVTGKVAPLIELGAGFDPELTGRENIYLRGLILGLTRK 122 (249)
T ss_pred CceEEEeCCCEEEEECCCCCcHHHHHHHHhC--ccCCCCceEEEcceEehhhhcccCCCcccchHHHHHHHHHHhCccHH
Confidence 4999999999999999999999999999994 455543 344555444433345566665557643 211 1
Q ss_pred CCHHHHHHHHHHccchhh----HhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHH-hCCceEEE
Q 047286 155 ASDEHIRPAVQLANAEKS----IDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKL-VTNQTVVI 212 (632)
Q Consensus 155 ~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~-~~~~tvii 212 (632)
..++.+++.++.+.+.++ ++.+|.|+..+++ .+..|+.=.+.-.+.+.++ .+++|+|+
T Consensus 123 ei~~~~~eIieFaELG~fi~~PvktYSSGM~aRLaFsia~~~~pdILllDEvlavGD~~F~~K~~~rl~e~~~~~~tiv~ 202 (249)
T COG1134 123 EIDEKVDEIIEFAELGDFIDQPVKTYSSGMYARLAFSVATHVEPDILLLDEVLAVGDAAFQEKCLERLNELVEKNKTIVL 202 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchhhccHHHHHHHHHhhhhhcCCCEEEEehhhhcCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 234556677777777665 5678889988875 3567888777777777777 56799999
Q ss_pred EecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 213 VANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 213 itH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
|||++..++. ||++++|++|+|...|+++++.+
T Consensus 203 VSHd~~~I~~~Cd~~i~l~~G~i~~~G~~~~vi~ 236 (249)
T COG1134 203 VSHDLGAIKQYCDRAIWLEHGQIRMEGSPEEVIP 236 (249)
T ss_pred EECCHHHHHHhcCeeEEEeCCEEEEcCCHHHHHH
Confidence 9999999976 99999999999999999999864
No 334
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=99.81 E-value=9.4e-20 Score=182.03 Aligned_cols=152 Identities=16% Similarity=0.299 Sum_probs=112.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEc-ccCcccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVS-KEPIFLF-CDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~-Q~~~~~~-~~~~~~~~i 148 (632)
.+||++++||+++|+||||||||||+++|+|+.... +...++.++|++ |++.++. .+..+ |+
T Consensus 39 ~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e--~l 116 (236)
T cd03267 39 GISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVID--SF 116 (236)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHH--HH
Confidence 399999999999999999999999999998653211 112456799997 5454432 23333 44
Q ss_pred ccCC--CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHH
Q 047286 149 PYGK--QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAM 201 (632)
Q Consensus 149 ~~~~--~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l 201 (632)
.+.. .... .+++.++++..++.+ .+..||+|..+++ +|++||+.+++.+.+.|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l 196 (236)
T cd03267 117 YLLAAIYDLPPARFKKRLDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFL 196 (236)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHH
Confidence 3221 1111 234456677766643 4677999998877 39999999999999999
Q ss_pred HHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 202 VKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 202 ~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
+++.+ +.|+|++||+++.+.. ||++++|++|++++.|
T Consensus 197 ~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 197 KEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99853 6899999999998765 9999999999998764
No 335
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=99.81 E-value=1.1e-20 Score=173.94 Aligned_cols=162 Identities=20% Similarity=0.260 Sum_probs=122.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------c--HHhhcceEEEcccCccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------P--EAEQEKIGLVSKEPIFLFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~--~~~r~~i~~v~Q~~~~~~~~~~~~~~i 148 (632)
.+||+|++||++++.||||+||||.+.++.|+...+ | ...|..|||+||++.+|-. ++..+|+
T Consensus 22 ~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr~-LtV~dNi 100 (243)
T COG1137 22 DVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFRK-LTVEDNI 100 (243)
T ss_pred eeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcccccccchHhhc-CcHHHHH
Confidence 499999999999999999999999999987653221 1 1245679999999987753 3444466
Q ss_pred ccCCC----CC----CHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHH
Q 047286 149 PYGKQ----NA----SDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQA 199 (632)
Q Consensus 149 ~~~~~----~~----~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~ 199 (632)
....+ +. ..+++.+.++...+.+ .-.+||+|.+.++ +++|+||.+...|++
T Consensus 101 ~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~ 180 (243)
T COG1137 101 MAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQR 180 (243)
T ss_pred HHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHH
Confidence 53211 11 1223446666666543 3457889988766 389999999999999
Q ss_pred HHHHHhC-CceEEEEecCch-HHhhcCeEEEEeCCeEEEecChhHHhcCC
Q 047286 200 AMVKLVT-NQTVVIVANCLI-TIRNADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 200 ~l~~~~~-~~tviiitH~~~-~~~~aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
.++.++. +..|+++-|+.. ++..|||.+++.+|++..+|+++|+.+++
T Consensus 181 iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 181 IIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred HHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 9999975 567777778874 56779999999999999999999998763
No 336
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=99.81 E-value=3.9e-20 Score=189.98 Aligned_cols=124 Identities=23% Similarity=0.295 Sum_probs=90.5
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh--------------------------------cHH------H
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV--------------------------------IYS------W 538 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~--------------------------------~~~------~ 538 (632)
+++.+|.-++++.++|||||||||++++|.||++|++. +.. +
T Consensus 23 ~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGL 102 (352)
T COG3842 23 DISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGL 102 (352)
T ss_pred cceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccceeecCcccCCCCcHHHHhhhhh
Confidence 34556777789999999999999999999999999650 000 0
Q ss_pred H---------H-HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------------
Q 047286 539 I---------I-IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------------- 581 (632)
Q Consensus 539 ~---------~-~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------------- 581 (632)
. + ..+.+..... |++..-.....+|||||+||+|||||+..
T Consensus 103 k~~~~~~~~~i~~rv~e~L~lV--~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk 180 (352)
T COG3842 103 KVRKKLKKAEIKARVEEALELV--GLEGFADRKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELK 180 (352)
T ss_pred hhcCCCCHHHHHHHHHHHHHHc--CchhhhhhChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHH
Confidence 0 0 0111111111 23333345678999999999999999433
Q ss_pred ----------hccccc-hhhhhcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 ----------CGCGSP-PYHYKNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 ----------~~iahr-l~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
|.+||. -+.+.-+|||+||++|+|++.||++|++.++...|
T Consensus 181 ~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~~f 232 (352)
T COG3842 181 ELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPATRF 232 (352)
T ss_pred HHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcchHH
Confidence 788996 56678899999999999999999999998754443
No 337
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=99.81 E-value=9.9e-20 Score=202.96 Aligned_cols=159 Identities=21% Similarity=0.274 Sum_probs=122.3
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC-------C--C-c------------HHhhcceEEEcccCcccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRF-------Y--A-P------------EAEQEKIGLVSKEPIFLFCDFN 143 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~-------~--~-~------------~~~r~~i~~v~Q~~~~~~~~~~ 143 (632)
+||+|++||+++|+||||||||||+++|.|+.. + + . ...+++++|++|++.++. ..+
T Consensus 303 is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~-~~t 381 (520)
T TIGR03269 303 VSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYP-HRT 381 (520)
T ss_pred EEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCC-CCc
Confidence 999999999999999999999999999986521 1 1 0 013457999999986554 233
Q ss_pred cccccccC----CCC-CCHHHHHHHHHHccch---------hhHhhCCcccccccc-----------------cCCCCHH
Q 047286 144 EGQYIPYG----KQN-ASDEHIRPAVQLANAE---------KSIDKLPLGLDTVVA-----------------TNAVDAQ 192 (632)
Q Consensus 144 ~~~~i~~~----~~~-~~~~~~~~~~~~~~l~---------~~i~~l~~g~~~~v~-----------------ts~LD~~ 192 (632)
..+|+.+. ... ...+++.++++.+++. ..+.+||+|++++++ |++||+.
T Consensus 382 v~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~ 461 (520)
T TIGR03269 382 VLDNLTEAIGLELPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPI 461 (520)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHH
Confidence 33355431 111 1123566778887774 456789999998883 9999999
Q ss_pred HHHHHHHHHHHHh-C-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhc
Q 047286 193 SERIVQAAMVKLV-T-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 193 ~~~~i~~~l~~~~-~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+++.+.+.|+++. + +.|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 462 ~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 462 TKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999885 3 6899999999998865 99999999999999999888753
No 338
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=99.81 E-value=1.7e-19 Score=182.50 Aligned_cols=161 Identities=16% Similarity=0.240 Sum_probs=118.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH--hhcceEEEcccCcccccccccccccccCC--CCCCHHH-
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA--EQEKIGLVSKEPIFLFCDFNEGQYIPYGK--QNASDEH- 159 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~--~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~--~~~~~~~- 159 (632)
.+||++++|++++|+||||||||||+++|+|+....... +...+++++|++.++. ..+..+|+.+.. ...+.++
T Consensus 42 ~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~~g~~~~~~~~~~~~~-~~tv~enl~~~~~~~~~~~~~~ 120 (264)
T PRK13546 42 DISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRNGEVSVIAISAGLSG-QLTGIENIEFKMLCMGFKRKEI 120 (264)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEeEEecccCCCC-CCcHHHHHHHHHHHcCCCHHHH
Confidence 399999999999999999999999999999653322111 2234677777765432 222223554321 1122222
Q ss_pred ---HHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-CCceEEEEe
Q 047286 160 ---IRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-TNQTVVIVA 214 (632)
Q Consensus 160 ---~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~~tviiit 214 (632)
+.++++..++.+ .+..||.|+.+++ +|++||+.+++.+.+.+.++. .++|+|++|
T Consensus 121 ~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiis 200 (264)
T PRK13546 121 KAMTPKIIEFSELGEFIYQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVS 200 (264)
T ss_pred HHHHHHHHHHcCCchhhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 344566656544 4567888988777 389999999999999998875 478999999
Q ss_pred cCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 215 NCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 215 H~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|++..+.. ||+|++|++|++++.|+++++...
T Consensus 201 H~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (264)
T PRK13546 201 HNLGQVRQFCTKIAWIEGGKLKDYGELDDVLPK 233 (264)
T ss_pred CCHHHHHHHcCEEEEEECCEEEEeCCHHHHHHH
Confidence 99998865 999999999999999999998765
No 339
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=99.80 E-value=1.5e-19 Score=178.75 Aligned_cols=148 Identities=26% Similarity=0.317 Sum_probs=114.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH---HhhcceEEEcccCcccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE---AEQEKIGLVSKEPIFLF-CDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~---~~r~~i~~v~Q~~~~~~-~~~~~~ 145 (632)
.+||++++|++++|+||||||||||+++|.|..... +. ..++.++|++|++.+|. .++.+
T Consensus 23 ~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~- 101 (220)
T TIGR02982 23 DINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLGFLTARQ- 101 (220)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcCCCCHHH-
Confidence 399999999999999999999999999998653210 00 23568999999997765 35554
Q ss_pred cccccCC---CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 146 QYIPYGK---QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 146 ~~i~~~~---~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.+.. .... .+++.++++.+++.+ .+.++|.|..+++ +|++||+.+++.+
T Consensus 102 -n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l 180 (220)
T TIGR02982 102 -NVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDV 180 (220)
T ss_pred -HHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHH
Confidence 554321 1111 235677778777654 4567888888777 3899999999999
Q ss_pred HHHHHHHhC--CceEEEEecCchHHhhcCeEEEEeCCeE
Q 047286 198 QAAMVKLVT--NQTVVIVANCLITIRNADCIIMVSKGKI 234 (632)
Q Consensus 198 ~~~l~~~~~--~~tviiitH~~~~~~~aD~i~vl~~G~i 234 (632)
.+.|+++.+ ++|+|++||+++....||+|++|++|++
T Consensus 181 ~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 181 VELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999998853 7899999999987777999999999986
No 340
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.80 E-value=8.6e-20 Score=176.38 Aligned_cols=133 Identities=21% Similarity=0.311 Sum_probs=103.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-------------HHhhcceEEEcccCccccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-------------EAEQEKIGLVSKEPIFLFC-DFNEGQYIPY 150 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-------------~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~ 150 (632)
.+||++++|++++|+||||||||||+++|.|.....+ ...++.++|++|++.++.. ++.+ |+.+
T Consensus 25 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~l~~ 102 (192)
T cd03232 25 NISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLDKNFQRSTGYVEQQDVHSPNLTVRE--ALRF 102 (192)
T ss_pred ccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehHHHhhhceEEecccCccccCCcHHH--HHHH
Confidence 3999999999999999999999999999997532111 2245679999999865543 4444 4433
Q ss_pred CCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhC-CceEEE
Q 047286 151 GKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVT-NQTVVI 212 (632)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~-~~tvii 212 (632)
+. . ...||+|..+++ +|++||+.+++.+.+.++++.+ ++|+|+
T Consensus 103 ~~----------~---------~~~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii 163 (192)
T cd03232 103 SA----------L---------LRGLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILC 163 (192)
T ss_pred HH----------H---------HhcCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 21 0 017888887777 3899999999999999998854 789999
Q ss_pred EecCchH-H-hhcCeEEEEeC-CeEEEec
Q 047286 213 VANCLIT-I-RNADCIIMVSK-GKIVEKG 238 (632)
Q Consensus 213 itH~~~~-~-~~aD~i~vl~~-G~i~~~g 238 (632)
+||+++. + ..||++++|++ |++++.|
T Consensus 164 vtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 164 TIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred EEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999973 4 56999999999 9998765
No 341
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.80 E-value=1.4e-19 Score=171.60 Aligned_cols=120 Identities=33% Similarity=0.502 Sum_probs=95.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|+.... +...++.++|++|++.+|..++.+ |+
T Consensus 20 ~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~t~~e--~l- 96 (171)
T cd03228 20 DVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAYVPQDPFLFSGTIRE--NI- 96 (171)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEEEcCCchhccchHHH--Hh-
Confidence 399999999999999999999999999998653211 123456799999998766554443 43
Q ss_pred cCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEE
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVI 212 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tvii 212 (632)
||.|..+++ +|++||+.+++.+.+.++++.+++|+|+
T Consensus 97 --------------------------LS~G~~~rl~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~ 150 (171)
T cd03228 97 --------------------------LSGGQRQRIAIARALLRDPPILILDEATSALDPETEALILEALRALAKGKTVIV 150 (171)
T ss_pred --------------------------hCHHHHHHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 333333332 4899999999999999999877789999
Q ss_pred EecCchHHhhcCeEEEEeCCe
Q 047286 213 VANCLITIRNADCIIMVSKGK 233 (632)
Q Consensus 213 itH~~~~~~~aD~i~vl~~G~ 233 (632)
+||+++.++.||++++|++|+
T Consensus 151 ~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 151 IAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EecCHHHHHhCCEEEEEcCCC
Confidence 999999987799999999985
No 342
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=99.80 E-value=2.1e-19 Score=181.54 Aligned_cols=158 Identities=18% Similarity=0.308 Sum_probs=116.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-----------------HHhhc-ceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-----------------EAEQE-KIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-----------------~~~r~-~i~~v~Q~~~~~~~~~~~~~ 146 (632)
.+||++++||+++|+||||||||||+++|.|+..+.| ...++ .++|++|++.++... ...+
T Consensus 25 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~q~~~~~~~~-~~~~ 103 (252)
T CHL00131 25 GLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLGIFLAFQYPIEIPGV-SNAD 103 (252)
T ss_pred cceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheeeEEEEeccccccccc-cHHH
Confidence 3999999999999999999999999999997521111 11122 488999998755432 2222
Q ss_pred ccccCC---------CCCC----HHHHHHHHHHccchh-----hHh-hCCccccccc-----------------ccCCCC
Q 047286 147 YIPYGK---------QNAS----DEHIRPAVQLANAEK-----SID-KLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 147 ~i~~~~---------~~~~----~~~~~~~~~~~~l~~-----~i~-~l~~g~~~~v-----------------~ts~LD 190 (632)
++.+.. .+.. .+++.++++.+++.+ ... .||+|..+++ +|++||
T Consensus 104 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD 183 (252)
T CHL00131 104 FLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEILQMALLDSELAILDETDSGLD 183 (252)
T ss_pred HHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCC
Confidence 332210 0111 234566777777642 233 4888988877 399999
Q ss_pred HHHHHHHHHHHHHHh-CCceEEEEecCchHHhh--cCeEEEEeCCeEEEecChhHH
Q 047286 191 AQSERIVQAAMVKLV-TNQTVVIVANCLITIRN--ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~--aD~i~vl~~G~i~~~g~~~el 243 (632)
+.+++.+.+.|+++. ++.|+|++||+++.+.. ||++++|++|++++.|+++.+
T Consensus 184 ~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 184 IDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhhh
Confidence 999999999999885 47899999999998864 899999999999999988743
No 343
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=99.80 E-value=5.2e-19 Score=174.62 Aligned_cols=146 Identities=20% Similarity=0.298 Sum_probs=109.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------c---------HHhhcceEEEcccCcccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------P---------EAEQEKIGLVSKEPIFLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------~---------~~~r~~i~~v~Q~~~~~~~~~~~~ 145 (632)
.+||++++|++++|+||||||||||+++|+|..... . ...++.++|++|++.++..++.+
T Consensus 19 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~t~~~- 97 (218)
T cd03290 19 NINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSVAYAAQKPWLLNATVEE- 97 (218)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcceEEEEcCCCccccccHHH-
Confidence 399999999999999999999999999998653211 0 11345799999999877655555
Q ss_pred cccccCCCCCCHHHHHHHHHHccchhhH---------------hhCCccccccc-----------------ccCCCCHHH
Q 047286 146 QYIPYGKQNASDEHIRPAVQLANAEKSI---------------DKLPLGLDTVV-----------------ATNAVDAQS 193 (632)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~~~l~~~i---------------~~l~~g~~~~v-----------------~ts~LD~~~ 193 (632)
|+.+... ...++..++++.+++.+.+ ..+|.|+.+++ +|++||+.+
T Consensus 98 -nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~ 175 (218)
T cd03290 98 -NITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTNIVFLDDPFSALDIHL 175 (218)
T ss_pred -HHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCccccCHHH
Confidence 6665432 2344555666666654433 45666666665 389999999
Q ss_pred HHHHHH--HHHHHhC-CceEEEEecCchHHhhcCeEEEEeCCe
Q 047286 194 ERIVQA--AMVKLVT-NQTVVIVANCLITIRNADCIIMVSKGK 233 (632)
Q Consensus 194 ~~~i~~--~l~~~~~-~~tviiitH~~~~~~~aD~i~vl~~G~ 233 (632)
++.+.+ .++.+.+ +.|+|++||+.+.+..||++++|++|.
T Consensus 176 ~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 176 SDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999988 5555543 689999999999888899999999884
No 344
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=99.80 E-value=1.8e-19 Score=175.29 Aligned_cols=135 Identities=21% Similarity=0.283 Sum_probs=103.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-----------------HH-hhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-----------------EA-EQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-----------------~~-~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
.+||++++||+++|+||||||||||+++|.|...+.| .. .+..++|++|++.++...... +
T Consensus 18 ~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~-~ 96 (200)
T cd03217 18 GVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLGIFLAFQYPPEIPGVKNA-D 96 (200)
T ss_pred ccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCcEEEeecChhhccCccHH-H
Confidence 3899999999999999999999999999997621111 11 234599999998655432111 1
Q ss_pred ccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhC-Cc
Q 047286 147 YIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVT-NQ 208 (632)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~-~~ 208 (632)
++ ......||.|+.+++ +|++||+.+++.+.+.|+++.+ ++
T Consensus 97 ~l---------------------~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~ 155 (200)
T cd03217 97 FL---------------------RYVNEGFSGGEKKRNEILQLLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGK 155 (200)
T ss_pred HH---------------------hhccccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCC
Confidence 11 111245677776655 3999999999999999999864 78
Q ss_pred eEEEEecCchHHh--hcCeEEEEeCCeEEEecChh
Q 047286 209 TVVIVANCLITIR--NADCIIMVSKGKIVEKGTHD 241 (632)
Q Consensus 209 tviiitH~~~~~~--~aD~i~vl~~G~i~~~g~~~ 241 (632)
|+|++||+++.+. .||++++|++|++++.|+.+
T Consensus 156 tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~~~~ 190 (200)
T cd03217 156 SVLIITHYQRLLDYIKPDRVHVLYDGRIVKSGDKE 190 (200)
T ss_pred EEEEEecCHHHHHHhhCCEEEEEECCEEEEEccHH
Confidence 9999999999887 69999999999999998443
No 345
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=99.80 E-value=1.8e-19 Score=200.04 Aligned_cols=157 Identities=14% Similarity=0.220 Sum_probs=120.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-Cc----------------HHhhcceEEEcccCc---ccc-cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-AP----------------EAEQEKIGLVSKEPI---FLF-CDFN 143 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-~~----------------~~~r~~i~~v~Q~~~---~~~-~~~~ 143 (632)
.+||+|++||+++|+||||||||||+++|+|+..+ .. ...+..++|++|++. ++. .++.
T Consensus 280 ~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~ 359 (506)
T PRK13549 280 DVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVG 359 (506)
T ss_pred ceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHH
Confidence 39999999999999999999999999999976321 00 112456999999962 332 2333
Q ss_pred cccccccCC----C-----CC--CHHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCC
Q 047286 144 EGQYIPYGK----Q-----NA--SDEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 144 ~~~~i~~~~----~-----~~--~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
+ |+.++. . .. ..+++.++++.+++. ..+.+||+|+++++ +|++||
T Consensus 360 e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD 437 (506)
T PRK13549 360 K--NITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGID 437 (506)
T ss_pred H--HhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcC
Confidence 3 454321 0 00 123466777777763 34678999999888 399999
Q ss_pred HHHHHHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 191 AQSERIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++..|+.+++
T Consensus 438 ~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 492 (506)
T PRK13549 438 VGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHNL 492 (506)
T ss_pred HhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEeccccC
Confidence 999999999999885 47899999999998865 999999999999999988765
No 346
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=99.80 E-value=1.2e-19 Score=174.95 Aligned_cols=111 Identities=30% Similarity=0.323 Sum_probs=78.4
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH--HH-----------------HHHHH
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI--II-----------------KCTNF 546 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~--~~-----------------~~~~~ 546 (632)
..-+|+-+++|||+||||||||||+++|.++-.|++ +....+ .+ .+.|.
T Consensus 24 v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~EN 103 (226)
T COG1136 24 VNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLPDLTVLEN 103 (226)
T ss_pred ceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCCCCCHHHH
Confidence 334666677999999999999999999999988854 111000 00 00011
Q ss_pred ------HhcCCC--------------ccCcccc-cCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 547 ------IASLPQ--------------GSDLNVG-ERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 547 ------i~~lp~--------------g~dt~vg-e~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
+...+. |+....- ....+||||||||+|||||+..
T Consensus 104 v~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ 183 (226)
T COG1136 104 VELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLE 183 (226)
T ss_pred HHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHH
Confidence 111111 4443333 4567899999999999999654
Q ss_pred -------------hccccchhhhhcCCEEEEEeCCeEeee
Q 047286 582 -------------CGCGSPPYHYKNADITSVVKNGVIAEK 608 (632)
Q Consensus 582 -------------~~iahrl~~~~~aD~I~vl~~G~ive~ 608 (632)
+++||.+.....|||++.|+||++.+.
T Consensus 184 ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~~ 223 (226)
T COG1136 184 LLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEEE 223 (226)
T ss_pred HHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeeec
Confidence 789999999999999999999996543
No 347
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=99.80 E-value=1.5e-19 Score=200.58 Aligned_cols=156 Identities=20% Similarity=0.275 Sum_probs=119.7
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------C--------c-HHhhcceEEEcccCc---ccc-cccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------A--------P-EAEQEKIGLVSKEPI---FLF-CDFNEG 145 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------~--------~-~~~r~~i~~v~Q~~~---~~~-~~~~~~ 145 (632)
+||+|++||+++|+||||||||||+++|+|.... + + ...++.++|++|++. ++. .++.+
T Consensus 272 isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e- 350 (501)
T PRK11288 272 ISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVAD- 350 (501)
T ss_pred eeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHH-
Confidence 9999999999999999999999999999865311 0 0 113467999999963 333 33433
Q ss_pred cccccCCC----------C--CCHHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCH
Q 047286 146 QYIPYGKQ----------N--ASDEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDA 191 (632)
Q Consensus 146 ~~i~~~~~----------~--~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~ 191 (632)
|+.++.. . ...+++.++++..++. ..+..||+|+++++ +|++||+
T Consensus 351 -~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~ 429 (501)
T PRK11288 351 -NINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDV 429 (501)
T ss_pred -HhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCH
Confidence 4443211 0 0123466777777762 34778999999888 3999999
Q ss_pred HHHHHHHHHHHHHhC-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 192 QSERIVQAAMVKLVT-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
.+++.+++.|.++.+ +.|+|++||+++.+.. ||++++|++|++++.|+.++.
T Consensus 430 ~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 483 (501)
T PRK11288 430 GAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQA 483 (501)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccC
Confidence 999999999999854 7899999999998865 999999999999999988765
No 348
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.80 E-value=2e-19 Score=179.97 Aligned_cols=130 Identities=37% Similarity=0.446 Sum_probs=105.2
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHH---------------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSW--------------------------- 538 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~--------------------------- 538 (632)
..-+|.-++++||+||+|||||||+++|.|+++|++. ....
T Consensus 20 i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~ 99 (236)
T cd03253 20 VSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVVPQDTVLFNDTIGYNIRYGR 99 (236)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEECCCChhhcchHHHHHhhcC
Confidence 3345555679999999999999999999999876430 0000
Q ss_pred ------H------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 539 ------I------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 539 ------~------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
. ...+.+++..+|.|+++.+..+..+||||||||++||||+..
T Consensus 100 ~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~ 179 (236)
T cd03253 100 PDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAA 179 (236)
T ss_pred CCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 0 002346677889999999999999999999999999999554
Q ss_pred ----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHh
Q 047286 582 ----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTAL 628 (632)
Q Consensus 582 ----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~ 628 (632)
++++|.+..+..||++++|++|++++.|+.+++... .+.|+.++..
T Consensus 180 l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 180 LRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred HHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 677999999999999999999999999999999986 7778777653
No 349
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=99.80 E-value=1.7e-19 Score=174.60 Aligned_cols=133 Identities=23% Similarity=0.336 Sum_probs=102.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC--CCCc------------HHhhcceEEEcccCccccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFR--FYAP------------EAEQEKIGLVSKEPIFLFC-DFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~--~~~~------------~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|+. .... ...++.++|++|++.++.. ++.+ |+.
T Consensus 27 ~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t~~~--~i~ 104 (194)
T cd03213 27 NVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLTVRE--TLM 104 (194)
T ss_pred cceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCchHhhhheEEEccCcccCCCCCcHHH--HHH
Confidence 399999999999999999999999999999764 2211 1246779999999865542 4433 443
Q ss_pred cCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-CCceEE
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-TNQTVV 211 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~~tvi 211 (632)
+... ...||.|..+++ +|++||+.+++.+.+.|+++. +++|+|
T Consensus 105 ~~~~-------------------~~~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tii 165 (194)
T cd03213 105 FAAK-------------------LRGLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTII 165 (194)
T ss_pred HHHH-------------------hccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 2110 116777777666 389999999999999999885 478999
Q ss_pred EEecCch-HHh-hcCeEEEEeCCeEEEec
Q 047286 212 IVANCLI-TIR-NADCIIMVSKGKIVEKG 238 (632)
Q Consensus 212 iitH~~~-~~~-~aD~i~vl~~G~i~~~g 238 (632)
++||+++ .+. .||++++|++|++++.|
T Consensus 166 i~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 166 CSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred EEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 9999996 454 59999999999998654
No 350
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.80 E-value=7.4e-19 Score=179.24 Aligned_cols=121 Identities=25% Similarity=0.333 Sum_probs=98.9
Q ss_pred eeEEEEEecCCCChHHHHHhhhcCCChhhh--------------------------cH-----H---HH---HHHHHHHH
Q 047286 505 EHTVALVGENGNGKSTVISLAERFHNPEQV--------------------------IY-----S---WI---IIKCTNFI 547 (632)
Q Consensus 505 ~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~--------------------------~~-----~---~~---~~~~~~~i 547 (632)
++.+||+|++|||||||+++|+|+++|++. .. . .. ..++.+++
T Consensus 63 Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l 142 (282)
T cd03291 63 GEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDI 142 (282)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHH
Confidence 348999999999999999999999887430 00 0 00 01345677
Q ss_pred hcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------------------hccccchhhh
Q 047286 548 ASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------------------CGCGSPPYHY 591 (632)
Q Consensus 548 ~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------------------~~iahrl~~~ 591 (632)
..+|.++++.+++.+.+||||||||++||||+.. +++||.+..+
T Consensus 143 ~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~ 222 (282)
T cd03291 143 TKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHL 222 (282)
T ss_pred HhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHH
Confidence 7889999999999999999999999999999544 6789999999
Q ss_pred hcCCEEEEEeCCeEeeecChHHHhccCCchhHHHH
Q 047286 592 KNADITSVVKNGVIAEKGRHDALMKITDGTYASLT 626 (632)
Q Consensus 592 ~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~ 626 (632)
..||+|++|++|++++.|+++++.+. ...|...+
T Consensus 223 ~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 256 (282)
T cd03291 223 KKADKILILHEGSSYFYGTFSELQSL-RPDFSSKL 256 (282)
T ss_pred HhCCEEEEEECCEEEEECCHHHHHhc-chHHHHHH
Confidence 99999999999999999999999875 55666544
No 351
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.80 E-value=2.3e-19 Score=174.73 Aligned_cols=139 Identities=18% Similarity=0.232 Sum_probs=105.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---CCc--------------HHhhcceEEEcccCccccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---YAP--------------EAEQEKIGLVSKEPIFLFC-DFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---~~~--------------~~~r~~i~~v~Q~~~~~~~-~~~~~~ 146 (632)
.+||++++||+++|+||||||||||+++|.|+.. ... ...++.++|++|++.++.. ++.+
T Consensus 25 ~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~-- 102 (202)
T cd03233 25 DFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRE-- 102 (202)
T ss_pred eEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCCCcHHH--
Confidence 3999999999999999999999999999987643 100 1235679999999866543 5554
Q ss_pred ccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhC--C
Q 047286 147 YIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVT--N 207 (632)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~--~ 207 (632)
|+.+.... ..+..+..||.|..+++ +|++||+.+++.+.+.++++.+ +
T Consensus 103 ~l~~~~~~-------------~~~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~ 169 (202)
T cd03233 103 TLDFALRC-------------KGNEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLK 169 (202)
T ss_pred HHhhhhhh-------------ccccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCC
Confidence 55443210 04566788999988777 3999999999999999999854 4
Q ss_pred ceEEEEec-CchHH-hhcCeEEEEeCCeEEEec
Q 047286 208 QTVVIVAN-CLITI-RNADCIIMVSKGKIVEKG 238 (632)
Q Consensus 208 ~tviiitH-~~~~~-~~aD~i~vl~~G~i~~~g 238 (632)
.|+|+++| +.+.+ +.||++++|++|++++.|
T Consensus 170 ~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 170 TTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 57666655 45565 459999999999998754
No 352
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=99.80 E-value=2.5e-19 Score=187.06 Aligned_cols=126 Identities=24% Similarity=0.257 Sum_probs=90.5
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHH---H----------------------HH-
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSW---I----------------------II- 541 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~---~----------------------~~- 541 (632)
-+|.-++++||+||||||||||+++|.|+++|++ +.... . +.
T Consensus 26 l~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~ 105 (343)
T TIGR02314 26 LHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVAL 105 (343)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCcHHHHHHH
Confidence 3455556899999999999999999999998853 11100 0 00
Q ss_pred --------------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 542 --------------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 542 --------------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
.+.+.+..+ |+.........+||||||||++||||+..
T Consensus 106 ~~~~~~~~~~~~~~~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL 183 (343)
T TIGR02314 106 PLELDNTPKDEIKRKVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELL 183 (343)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 011222221 34334445667899999999999999544
Q ss_pred -----------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCc-hhHHHHH
Q 047286 582 -----------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDG-TYASLTA 627 (632)
Q Consensus 582 -----------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g-~y~~l~~ 627 (632)
+++||.++.++ .||+|++|++|+|+|.|++++++..+.. .++.++.
T Consensus 184 ~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~~~~~~~~~ 242 (343)
T TIGR02314 184 KEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKTPLAQKFIR 242 (343)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCcHHHHHHHh
Confidence 78899999985 5999999999999999999999875333 3445543
No 353
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.80 E-value=2.7e-19 Score=169.92 Aligned_cols=122 Identities=23% Similarity=0.393 Sum_probs=96.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCccccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|..... +...++.++|++|++.++.. ++.+ |+.
T Consensus 18 ~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~~~ 95 (173)
T cd03230 18 DISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTVRE--NLK 95 (173)
T ss_pred eeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcHHH--Hhh
Confidence 399999999999999999999999999998652210 12346789999999876543 3333 332
Q ss_pred cCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-CCceEE
Q 047286 150 YGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-TNQTVV 211 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~~tvi 211 (632)
||.|..+++ +|++||+.+++.+.+.|+++. ++.|+|
T Consensus 96 --------------------------LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tii 149 (173)
T cd03230 96 --------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTIL 149 (173)
T ss_pred --------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 455554444 499999999999999999985 468999
Q ss_pred EEecCchHHh-hcCeEEEEeCCeE
Q 047286 212 IVANCLITIR-NADCIIMVSKGKI 234 (632)
Q Consensus 212 iitH~~~~~~-~aD~i~vl~~G~i 234 (632)
++||+.+.+. .||++++|++|++
T Consensus 150 i~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 150 LSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999887 5999999999974
No 354
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=99.79 E-value=2.6e-19 Score=186.81 Aligned_cols=152 Identities=24% Similarity=0.368 Sum_probs=116.9
Q ss_pred EEcCCCchHHHHHHHHHhCCCCC-------------cHHhhcceEEEcccCccccc-ccccccccccCCC--CCC----H
Q 047286 98 LVGQSGSGKSTVINLVESFRFYA-------------PEAEQEKIGLVSKEPIFLFC-DFNEGQYIPYGKQ--NAS----D 157 (632)
Q Consensus 98 ivG~sGsGKSTLl~ll~~~~~~~-------------~~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~~~~--~~~----~ 157 (632)
|+||||||||||+++|.|+.... ....+++++|++|++.+|.. ++.+ |+.++.. ... .
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~e--nl~~~~~~~~~~~~~~~ 78 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPDSGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEE--NVAFGLKMRKVPRAEIK 78 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHH--HHHHHHhhcCCCHHHHH
Confidence 68999999999999998653211 01235679999999876643 5544 6665421 111 2
Q ss_pred HHHHHHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHhC--CceEEEEe
Q 047286 158 EHIRPAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLVT--NQTVVIVA 214 (632)
Q Consensus 158 ~~~~~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~~--~~tviiit 214 (632)
+++.++++..++.+ ...+||+|++++++ |++||+.+++.+.+.|+++.+ +.|+|++|
T Consensus 79 ~~~~~~l~~~~l~~~~~~~~~~LSgGq~qRvalaraL~~~p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~~g~tiiivT 158 (325)
T TIGR01187 79 PRVLEALRLVQLEEFADRKPHQLSGGQQQRVALARALVFKPKILLLDEPLSALDKKLRDQMQLELKTIQEQLGITFVFVT 158 (325)
T ss_pred HHHHHHHHHcCCcchhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 45677788877644 45678899988883 999999999999999998853 78999999
Q ss_pred cCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHH
Q 047286 215 NCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAY 251 (632)
Q Consensus 215 H~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~ 251 (632)
|+++.+.. ||+|++|++|++++.|+++++.+.+...+
T Consensus 159 Hd~~e~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~ 196 (325)
T TIGR01187 159 HDQEEAMTMSDRIAIMRKGKIAQIGTPEEIYEEPANLF 196 (325)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHH
Confidence 99988764 99999999999999999999987655444
No 355
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=99.79 E-value=1.9e-19 Score=172.55 Aligned_cols=126 Identities=21% Similarity=0.309 Sum_probs=96.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------------cHHhhcceEEEcccCc---ccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------------PEAEQEKIGLVSKEPI---FLF-CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------------~~~~r~~i~~v~Q~~~---~~~-~~~~~ 144 (632)
.+||++++|++++|+||||||||||+++|.|..... ....++.++|++|++. ++. .++.+
T Consensus 18 ~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~t~~e 97 (182)
T cd03215 18 DVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLDLSVAE 97 (182)
T ss_pred ceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCCCcHHH
Confidence 389999999999999999999999999998653211 1124567999999852 222 23333
Q ss_pred ccccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-C
Q 047286 145 GQYIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-T 206 (632)
Q Consensus 145 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~ 206 (632)
|+.+... ||.|+.+++ +|++||+.+++.+.+.++++. +
T Consensus 98 --~l~~~~~----------------------LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~ 153 (182)
T cd03215 98 --NIALSSL----------------------LSGGNQQKVVLARWLARDPRVLILDEPTRGVDVGAKAEIYRLIRELADA 153 (182)
T ss_pred --HHHHHhh----------------------cCHHHHHHHHHHHHHccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHC
Confidence 4433210 666666555 389999999999999999985 4
Q ss_pred CceEEEEecCchHHhh-cCeEEEEeCCeE
Q 047286 207 NQTVVIVANCLITIRN-ADCIIMVSKGKI 234 (632)
Q Consensus 207 ~~tviiitH~~~~~~~-aD~i~vl~~G~i 234 (632)
+.|+|++||+++.+.. ||++++|++|++
T Consensus 154 ~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 154 GKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 7899999999988866 999999999974
No 356
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=99.79 E-value=2.2e-19 Score=199.21 Aligned_cols=157 Identities=15% Similarity=0.277 Sum_probs=119.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c-HHhhcceEEEcccCc---ccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P-EAEQEKIGLVSKEPI---FLF-CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~-~~~r~~i~~v~Q~~~---~~~-~~~~~ 144 (632)
.+||+|++||+++|+||||||||||+++|.|+...+ + ...+++++|++|++. ++. .++.+
T Consensus 270 ~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e 349 (501)
T PRK10762 270 DVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKE 349 (501)
T ss_pred cceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHH
Confidence 399999999999999999999999999998653211 1 123567999999972 332 23433
Q ss_pred ccccccCC-----C-----C--CCHHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCC
Q 047286 145 GQYIPYGK-----Q-----N--ASDEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 145 ~~~i~~~~-----~-----~--~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
|+.++. . . ...+++.++++.+++. ..+..||+|+++++ +|++||
T Consensus 350 --~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD 427 (501)
T PRK10762 350 --NMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVD 427 (501)
T ss_pred --HhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCC
Confidence 444321 0 0 1123466777777662 35778999999888 399999
Q ss_pred HHHHHHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHH
Q 047286 191 AQSERIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el 243 (632)
+.+++.+.+.|+++. ++.|+|++||+++.+.. ||++++|++|+++..|+.+++
T Consensus 428 ~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 482 (501)
T PRK10762 428 VGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTREQA 482 (501)
T ss_pred HhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccccC
Confidence 999999999999985 47899999999998865 999999999999999987764
No 357
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=99.79 E-value=2e-19 Score=169.49 Aligned_cols=124 Identities=21% Similarity=0.281 Sum_probs=96.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEEcccCcccccccccccccccCCCCCCHHHH
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHI 160 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~ 160 (632)
.+||++++||+++|+||||||||||+++|.|........ .+++++|++|++.++..++.+ |+.+.
T Consensus 19 ~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~~~~tv~~--nl~~~--------- 87 (166)
T cd03223 19 DLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLPLGTLRE--QLIYP--------- 87 (166)
T ss_pred cCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCccccccHHH--Hhhcc---------
Confidence 389999999999999999999999999999653322111 135799999998766555555 55442
Q ss_pred HHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhhc
Q 047286 161 RPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRNA 223 (632)
Q Consensus 161 ~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~a 223 (632)
....||.|..+++ +|++||+.+++.+.+.++++ +.|+|++||+++....|
T Consensus 88 -----------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~ 154 (166)
T cd03223 88 -----------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFH 154 (166)
T ss_pred -----------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhC
Confidence 1245555555544 38999999999999999886 58999999999877779
Q ss_pred CeEEEEeCC
Q 047286 224 DCIIMVSKG 232 (632)
Q Consensus 224 D~i~vl~~G 232 (632)
|++++|++|
T Consensus 155 d~i~~l~~~ 163 (166)
T cd03223 155 DRVLDLDGE 163 (166)
T ss_pred CEEEEEcCC
Confidence 999999875
No 358
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.79 E-value=3e-19 Score=158.61 Aligned_cols=158 Identities=21% Similarity=0.308 Sum_probs=117.6
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC---------------C-C-----cHHhhcceEEEcccCccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRF---------------Y-A-----PEAEQEKIGLVSKEPIFLFCDFNE 144 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~---------------~-~-----~~~~r~~i~~v~Q~~~~~~~~~~~ 144 (632)
++|+-+.||.+.++||||+|||||++.+.-+.. . . ..++|+.+|+|+|+..++ ..++.
T Consensus 21 i~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i~~lr~~vgmvfqqy~lw-phltv 99 (242)
T COG4161 21 ITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRDLRRNVGMVFQQYNLW-PHLTV 99 (242)
T ss_pred eeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHHHHHHHhhhhhhhhhccC-chhHH
Confidence 888999999999999999999999997642110 0 0 123789999999997654 33333
Q ss_pred cccccc------CC-CCCCHHHHHHHHHHccchhhHh----hCCcccccccc-----------------cCCCCHHHHHH
Q 047286 145 GQYIPY------GK-QNASDEHIRPAVQLANAEKSID----KLPLGLDTVVA-----------------TNAVDAQSERI 196 (632)
Q Consensus 145 ~~~i~~------~~-~~~~~~~~~~~~~~~~l~~~i~----~l~~g~~~~v~-----------------ts~LD~~~~~~ 196 (632)
-+|+-- +. .+....+..+.++...+.++.+ .|++|.+++++ |++|||+-..+
T Consensus 100 ~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~plhlsggqqqrvaiaralmmkpqvllfdeptaaldpeitaq 179 (242)
T COG4161 100 QENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQ 179 (242)
T ss_pred HHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCceecccchhhhHHHHHHHhcCCcEEeecCcccccCHHHHHH
Confidence 334321 11 1112233455566666655554 55678888884 89999999999
Q ss_pred HHHHHHHHhC-CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHh
Q 047286 197 VQAAMVKLVT-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 197 i~~~l~~~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~ 244 (632)
+.+.|+++.. |.|-+++||..+..+. |.+|+.|++|+|++.|+++-.-
T Consensus 180 vv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive~g~a~~ft 229 (242)
T COG4161 180 IVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFT 229 (242)
T ss_pred HHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEeecchhhcc
Confidence 9999999964 8899999999999876 9999999999999999987653
No 359
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.79 E-value=2.4e-19 Score=179.04 Aligned_cols=124 Identities=40% Similarity=0.588 Sum_probs=101.4
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHHH-----------------------------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSWI----------------------------- 539 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~~----------------------------- 539 (632)
++.-++.++|+||+|||||||+++|.|++.|++- .....
T Consensus 24 ~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~ 103 (234)
T cd03251 24 DIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFNDTVAENIAYGRPGA 103 (234)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeeccccHHHHhhccCCCC
Confidence 4555568999999999999999999999877430 00000
Q ss_pred ----------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------------
Q 047286 540 ----------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------------- 581 (632)
Q Consensus 540 ----------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------------- 581 (632)
...+.+++..+|.|+++..+....+||||||||++||||+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~ 183 (234)
T cd03251 104 TREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALER 183 (234)
T ss_pred CHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHH
Confidence 003456777888899999999999999999999999999654
Q ss_pred -------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHH
Q 047286 582 -------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASL 625 (632)
Q Consensus 582 -------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l 625 (632)
+++||.+..+..||+|++|++|++++.|+.++++.. .+.|+.+
T Consensus 184 ~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (234)
T cd03251 184 LMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAKL 233 (234)
T ss_pred hcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhhh
Confidence 788999999989999999999999999999999986 7777654
No 360
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.79 E-value=4.3e-19 Score=169.42 Aligned_cols=122 Identities=30% Similarity=0.385 Sum_probs=95.8
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC---------------C--cHHhhcceEEEcccCccccc-ccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY---------------A--PEAEQEKIGLVSKEPIFLFC-DFNEGQY 147 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~---------------~--~~~~r~~i~~v~Q~~~~~~~-~~~~~~~ 147 (632)
+||++++||+++|+||||||||||+++|.|.... + +...++.++|++|++.++.. ++.+ |
T Consensus 19 i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~--~ 96 (178)
T cd03229 19 VSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPHLTVLE--N 96 (178)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEEEEecCCccCCCCCHHH--h
Confidence 8999999999999999999999999999865221 0 12345789999999876542 4444 4
Q ss_pred cccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhC--Cc
Q 047286 148 IPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVT--NQ 208 (632)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~--~~ 208 (632)
+.+. +|.|+.+++ +|++||+.++..+.+.|+++.+ ++
T Consensus 97 l~~~------------------------lS~G~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~ 152 (178)
T cd03229 97 IALG------------------------LSGGQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGI 152 (178)
T ss_pred eeec------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCC
Confidence 4322 444444443 4899999999999999999864 58
Q ss_pred eEEEEecCchHHh-hcCeEEEEeCCe
Q 047286 209 TVVIVANCLITIR-NADCIIMVSKGK 233 (632)
Q Consensus 209 tviiitH~~~~~~-~aD~i~vl~~G~ 233 (632)
|+|++||+++.+. .||++++|++|+
T Consensus 153 tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 153 TVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999987 499999999985
No 361
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=99.79 E-value=5.1e-19 Score=197.58 Aligned_cols=158 Identities=20% Similarity=0.250 Sum_probs=121.0
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEEcccCc-ccccccccccccccC-CCCCCHHH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLVSKEPI-FLFCDFNEGQYIPYG-KQNASDEH 159 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v~Q~~~-~~~~~~~~~~~i~~~-~~~~~~~~ 159 (632)
+||+|++|++++|+||||||||||+++|+|+....... .+..++|++|++. .+....+..+|+.+. ......++
T Consensus 338 is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 417 (530)
T PRK15064 338 LNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSENANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQA 417 (530)
T ss_pred cEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCceEEEEEcccccccCCCCCcHHHHHHHhccCCccHHH
Confidence 89999999999999999999999999999653222111 2357999999974 233323333344322 11223556
Q ss_pred HHHHHHHccc-----hhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCc
Q 047286 160 IRPAVQLANA-----EKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCL 217 (632)
Q Consensus 160 ~~~~~~~~~l-----~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~ 217 (632)
+.++++..++ +..+..||+|+++++ +|++||+.+.+.+.+.|+++ +.|+|++||+.
T Consensus 418 ~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~ 495 (530)
T PRK15064 418 VRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDR 495 (530)
T ss_pred HHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 7778888766 235788999998887 39999999999999999887 45999999999
Q ss_pred hHHhh-cCeEEEEeCCeEE-EecChhHHhc
Q 047286 218 ITIRN-ADCIIMVSKGKIV-EKGTHDELIE 245 (632)
Q Consensus 218 ~~~~~-aD~i~vl~~G~i~-~~g~~~el~~ 245 (632)
+.+.. ||++++|++|+++ ..|+++++.+
T Consensus 496 ~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~ 525 (530)
T PRK15064 496 EFVSSLATRIIEITPDGVVDFSGTYEEYLR 525 (530)
T ss_pred HHHHHhCCEEEEEECCeEEEcCCCHHHHHH
Confidence 98865 9999999999998 7888888754
No 362
>COG4107 PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.79 E-value=3.3e-19 Score=160.34 Aligned_cols=172 Identities=23% Similarity=0.364 Sum_probs=126.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC-------C-----CcHH------------hhcceEEEcccCccc-c
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF-------Y-----APEA------------EQEKIGLVSKEPIFL-F 139 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~-------~-----~~~~------------~r~~i~~v~Q~~~~~-~ 139 (632)
++||++.|||..+|||+||||||||+++|.+-.. | .+.+ .|..-|+|.|+|.-- -
T Consensus 24 ~vsF~l~PGeVLgiVGESGSGKtTLL~~is~rl~p~~G~v~Y~~r~~~~~dl~~msEaeRR~L~RTeWG~VhQnP~DGLR 103 (258)
T COG4107 24 DVSFDLYPGEVLGIVGESGSGKTTLLKCISGRLTPDAGTVTYRMRDGQPRDLYTMSEAERRRLLRTEWGFVHQNPRDGLR 103 (258)
T ss_pred ccceeecCCcEEEEEecCCCcHHhHHHHHhcccCCCCCeEEEEcCCCCchhHhhhchHHHHHHhhhccceeecCccccce
Confidence 3999999999999999999999999999963211 1 0100 345689999998420 1
Q ss_pred cccccccccc-----cCCCCC--CHHHHHHHHHHcc-----chhhHhhCCccccccc-----------------ccCCCC
Q 047286 140 CDFNEGQYIP-----YGKQNA--SDEHIRPAVQLAN-----AEKSIDKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 140 ~~~~~~~~i~-----~~~~~~--~~~~~~~~~~~~~-----l~~~i~~l~~g~~~~v-----------------~ts~LD 190 (632)
..+....||. .|.+.+ ...+..+.++.+. +++....+++|+++++ +|.+||
T Consensus 104 m~VSAG~NiGERlma~G~RHYG~iR~~a~~WL~~VEI~~~RiDD~PrtFSGGMqQRLQiARnLVt~PrLvfMDEPTGGLD 183 (258)
T COG4107 104 MQVSAGGNIGERLMAIGARHYGNIRAEAQDWLEEVEIDLDRIDDLPRTFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLD 183 (258)
T ss_pred eeeccCCccchhHHhhhhhhhhhHHHHHHHHHHhcccCcccccCcccccchHHHHHHHHHHHhccCCceEEecCCCCCcc
Confidence 1111222321 121111 1233344555554 4455667888998776 389999
Q ss_pred HHHHHHHHHHHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHHHHHH
Q 047286 191 AQSERIVQAAMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYSQLVR 256 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~ 256 (632)
...+..+.++++.+.. +-.++++|||+..++. +||..+|++|++++.|-.+.++.+|..+|.++.-
T Consensus 184 VSVQARLLDllrgLv~~l~la~viVTHDl~VarLla~rlmvmk~g~vve~GLTDrvLDDP~hPYTQLLV 252 (258)
T COG4107 184 VSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLADRLMVMKQGQVVESGLTDRVLDDPHHPYTQLLV 252 (258)
T ss_pred hhhHHHHHHHHHHHHHhcCceEEEEechhHHHHHhhhcceeecCCCEeccccccccccCCCCchHHHHH
Confidence 9999999999999854 6799999999999986 9999999999999999999999999999988753
No 363
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.79 E-value=2.2e-19 Score=164.61 Aligned_cols=156 Identities=25% Similarity=0.324 Sum_probs=119.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh----------hcceEEEcccCcccccccccccccccCCCC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE----------QEKIGLVSKEPIFLFCDFNEGQYIPYGKQN 154 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~----------r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~ 154 (632)
++|++|.+||+++++||||||||||+|++.|+..+..... -..-|+|+|++.+++ ..+..+|+.|+.+-
T Consensus 23 ~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ~~~LlP-Wl~~~dNvafgL~l 101 (259)
T COG4525 23 DVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQNEALLP-WLNVIDNVAFGLQL 101 (259)
T ss_pred ccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEeccCccch-hhHHHHHHHHHHHh
Confidence 3999999999999999999999999999996533221110 124589999987653 44444588887532
Q ss_pred --CC----HHHHHHHHHHccch----hhHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHh--
Q 047286 155 --AS----DEHIRPAVQLANAE----KSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLV-- 205 (632)
Q Consensus 155 --~~----~~~~~~~~~~~~l~----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~-- 205 (632)
.. .+...+.+..+++. +++-+|++|++++++ +++||.-+++.+++.+.++.
T Consensus 102 ~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~ 181 (259)
T COG4525 102 RGIEKAQRREIAHQMLALVGLEGAEHKYIWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQE 181 (259)
T ss_pred cCCCHHHHHHHHHHHHHHhCcccccccceEeecchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHH
Confidence 12 23345566666664 457789999999984 78999999999999998874
Q ss_pred CCceEEEEecCchHHhh-cCeEEEEe--CCeEEEecChh
Q 047286 206 TNQTVVIVANCLITIRN-ADCIIMVS--KGKIVEKGTHD 241 (632)
Q Consensus 206 ~~~tviiitH~~~~~~~-aD~i~vl~--~G~i~~~g~~~ 241 (632)
.++.+++|||+++++-. |+++++|+ .|+|++.-+++
T Consensus 182 tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 182 TGKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred hCCeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCC
Confidence 48999999999988765 99999997 58998765443
No 364
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=99.79 E-value=4.4e-19 Score=177.64 Aligned_cols=130 Identities=47% Similarity=0.627 Sum_probs=103.7
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHH------------------H--------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSW------------------I-------- 539 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~------------------~-------- 539 (632)
+.-+++-++.+||+||+|||||||+++|.|++.|++. .... .
T Consensus 22 i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~ 101 (238)
T cd03249 22 LSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFDGTIAENIRYGK 101 (238)
T ss_pred eEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhhhhHHHHhhccC
Confidence 3335555679999999999999999999999876320 0000 0
Q ss_pred -------------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 540 -------------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 540 -------------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
..++.+++..+|.|+++.......+||||||||++||||+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~ 181 (238)
T cd03249 102 PDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEA 181 (238)
T ss_pred CCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH
Confidence 002345677888899999988889999999999999999554
Q ss_pred ----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhccCCchhHHHHHh
Q 047286 582 ----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKITDGTYASLTAL 628 (632)
Q Consensus 582 ----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~~ 628 (632)
++++|.++.+..||+|++|++|++++.|+.+++... .+.++.++..
T Consensus 182 l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~~ 237 (238)
T cd03249 182 LDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLVKA 237 (238)
T ss_pred HHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHhhc
Confidence 678999999999999999999999999999999986 7777776643
No 365
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=99.79 E-value=3.6e-19 Score=217.21 Aligned_cols=160 Identities=14% Similarity=0.187 Sum_probs=125.6
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--------------CcHHhhcceEEEcccCcccccccccccccccC
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIPYG 151 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~ 151 (632)
+||+|++||+++|+||||||||||+|+|.|.... .....++.+||+||++.++. .++..+++.+.
T Consensus 1958 ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~-~LTv~E~L~l~ 2036 (2272)
T TIGR01257 1958 LCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNMGYCPQFDAIDD-LLTGREHLYLY 2036 (2272)
T ss_pred eEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHHHhhhEEEEeccccCCC-CCCHHHHHHHH
Confidence 8999999999999999999999999999865321 11234678999999987653 33333355431
Q ss_pred C--CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHH
Q 047286 152 K--QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKL 204 (632)
Q Consensus 152 ~--~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~ 204 (632)
. .... .+.+.++++.+++.+ .+.+|++|.++++ +|+||||.+++.+++.|+++
T Consensus 2037 a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l 2116 (2272)
T TIGR01257 2037 ARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSI 2116 (2272)
T ss_pred HHhcCCCHHHHHHHHHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 1 1111 234556777787754 4678999999887 39999999999999999997
Q ss_pred h-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 205 V-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 205 ~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
. +++|+|++||++++++. ||||++|++|++++.|+++++.+.
T Consensus 2117 ~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2117 IREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 4 57899999999999875 999999999999999999998654
No 366
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=99.79 E-value=2.8e-19 Score=170.81 Aligned_cols=123 Identities=23% Similarity=0.275 Sum_probs=88.7
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH--------------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI-------------------------- 539 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~-------------------------- 539 (632)
++-+|+-++.+.++|||||||||+++++.|+++|++ ++...+
T Consensus 20 v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~V 99 (309)
T COG1125 20 VNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATV 99 (309)
T ss_pred eeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhhhhhcccCCCccHHHHHHhh
Confidence 344566667899999999999999999999999965 111111
Q ss_pred ----------HH-HHHHHHhcCCCccCc--ccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 540 ----------II-KCTNFIASLPQGSDL--NVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 540 ----------~~-~~~~~i~~lp~g~dt--~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
+. .+.+...- -|+|- -...-...|||||+||+.+|||+..
T Consensus 100 P~L~~w~k~~i~~r~~ELl~l--vgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e 177 (309)
T COG1125 100 PKLLGWDKERIKKRADELLDL--VGLDPSEYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEE 177 (309)
T ss_pred hhhcCCCHHHHHHHHHHHHHH--hCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHH
Confidence 00 11122111 13332 1233467899999999999999432
Q ss_pred ------------hccccchh-hhhcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 ------------CGCGSPPY-HYKNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 ------------~~iahrl~-~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
+.+||... .++-||||+||++|+|++.|+++++++++...|
T Consensus 178 ~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~F 231 (309)
T COG1125 178 IKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDF 231 (309)
T ss_pred HHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHH
Confidence 78899865 568899999999999999999999998754333
No 367
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=99.79 E-value=4.4e-19 Score=197.25 Aligned_cols=155 Identities=17% Similarity=0.279 Sum_probs=116.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c-HHhhcceEEEcccC---cccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P-EAEQEKIGLVSKEP---IFLF-CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~-~~~r~~i~~v~Q~~---~~~~-~~~~~ 144 (632)
.+||+|++|++++|+||||||||||+++|+|+.... + ...++.++|++|++ .++. .++.+
T Consensus 281 ~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e 360 (510)
T PRK09700 281 DISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQ 360 (510)
T ss_pred ceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHH
Confidence 399999999999999999999999999998653210 0 12356799999984 3332 23333
Q ss_pred ccccccCCC-------------C--CCHHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccC
Q 047286 145 GQYIPYGKQ-------------N--ASDEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATN 187 (632)
Q Consensus 145 ~~~i~~~~~-------------~--~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts 187 (632)
|+.++.. . ...+++.++++..++. ..+.+||+|+++++ +|+
T Consensus 361 --~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~ 438 (510)
T PRK09700 361 --NMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTR 438 (510)
T ss_pred --HhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 4443211 0 0123456677777663 34678999999888 399
Q ss_pred CCCHHHHHHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChh
Q 047286 188 AVDAQSERIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHD 241 (632)
Q Consensus 188 ~LD~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~ 241 (632)
+||+.+++.+.+.|+++. ++.|+|++||+++.+.. ||++++|++|++++.++..
T Consensus 439 ~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 494 (510)
T PRK09700 439 GIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNR 494 (510)
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecCc
Confidence 999999999999999874 47899999999988764 9999999999999887653
No 368
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=99.79 E-value=4.1e-19 Score=179.04 Aligned_cols=158 Identities=18% Similarity=0.244 Sum_probs=113.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc-----------------HHh-hcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP-----------------EAE-QEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~-----------------~~~-r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
.+||+|++|++++|+||||||||||+++|.|+..+.| ... +..++|++|++.++.. .+...
T Consensus 19 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~-~~~~~ 97 (248)
T PRK09580 19 GLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEIPG-VSNQF 97 (248)
T ss_pred cceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhccc-hhHHH
Confidence 3999999999999999999999999999997631111 111 2469999999865432 11110
Q ss_pred -------ccccCCC-C-CC----HHHHHHHHHHccchh-----hH-hhCCccccccc-----------------ccCCCC
Q 047286 147 -------YIPYGKQ-N-AS----DEHIRPAVQLANAEK-----SI-DKLPLGLDTVV-----------------ATNAVD 190 (632)
Q Consensus 147 -------~i~~~~~-~-~~----~~~~~~~~~~~~l~~-----~i-~~l~~g~~~~v-----------------~ts~LD 190 (632)
++..... . .. .+.+.+.++..++.+ .. ..||+|..+++ +|++||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~illLDEPt~~LD 177 (248)
T PRK09580 98 FLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLD 177 (248)
T ss_pred HHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCC
Confidence 1111100 0 11 223445555555521 12 26899998877 399999
Q ss_pred HHHHHHHHHHHHHHhC-CceEEEEecCchHHhh--cCeEEEEeCCeEEEecChhHH
Q 047286 191 AQSERIVQAAMVKLVT-NQTVVIVANCLITIRN--ADCIIMVSKGKIVEKGTHDEL 243 (632)
Q Consensus 191 ~~~~~~i~~~l~~~~~-~~tviiitH~~~~~~~--aD~i~vl~~G~i~~~g~~~el 243 (632)
+.+++.+.+.|+++.+ ++|+|++||++..+.. ||++++|++|++++.|+++.+
T Consensus 178 ~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 233 (248)
T PRK09580 178 IDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLV 233 (248)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHH
Confidence 9999999999998864 6899999999998875 899999999999999988754
No 369
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.78 E-value=3e-19 Score=185.58 Aligned_cols=115 Identities=20% Similarity=0.219 Sum_probs=86.3
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------c------------------H-HHH------------
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------I------------------Y-SWI------------ 539 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~------------------~-~~~------------ 539 (632)
-+|.-++++||+|+||||||||+++|.|+++|++. . . ...
T Consensus 47 l~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~ 126 (320)
T PRK13631 47 YTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPE 126 (320)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccccccccccccchHHHHHhcEEEEEECch
Confidence 34555569999999999999999999999887430 0 0 000
Q ss_pred -----------H---------------HHHHHHHhcCCCccC-cccccCCCCCChHHHHHHHHHHHHhh-----------
Q 047286 540 -----------I---------------IKCTNFIASLPQGSD-LNVGERGLQLSGGLKQRIARTRARNY----------- 581 (632)
Q Consensus 540 -----------~---------------~~~~~~i~~lp~g~d-t~vge~G~~LSgGQrQRiaiARA~~~----------- 581 (632)
+ ..+.+++..+ |++ ......+.+||||||||++||||+..
T Consensus 127 ~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPt 204 (320)
T PRK13631 127 YQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKM--GLDDSYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPT 204 (320)
T ss_pred hccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHc--CCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCc
Confidence 0 0111223333 453 34667788999999999999999654
Q ss_pred -------------------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhc
Q 047286 582 -------------------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMK 616 (632)
Q Consensus 582 -------------------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~ 616 (632)
+++||+++.+ +.||+|++|++|+|++.|+|+++.+
T Consensus 205 sgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 205 AGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 7889999977 6799999999999999999997643
No 370
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=99.78 E-value=4.4e-19 Score=173.58 Aligned_cols=143 Identities=22% Similarity=0.349 Sum_probs=109.4
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c----HHhhcceEEEcccCcccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P----EAEQEKIGLVSKEPIFLF-CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~----~~~r~~i~~v~Q~~~~~~-~~~~~ 144 (632)
.+||++++||+++|+||||||||||+++|.|+.... + ...++.++|++|++.++. .++.+
T Consensus 16 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 95 (206)
T TIGR03608 16 DLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALIENETVEE 95 (206)
T ss_pred ceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhccCCcHHH
Confidence 399999999999999999999999999998653210 0 013567999999987665 35554
Q ss_pred ccccccCCC------CCCHHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 145 GQYIPYGKQ------NASDEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~~------~~~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.+... ....+++.++++..++. ..+..||.|..+++ +|++||+.+++.+
T Consensus 96 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l 173 (206)
T TIGR03608 96 --NLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEV 173 (206)
T ss_pred --HHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHH
Confidence 5544211 11234566777777764 45677888988777 3999999999999
Q ss_pred HHHHHHHhC-CceEEEEecCchHHhhcCeEEEE
Q 047286 198 QAAMVKLVT-NQTVVIVANCLITIRNADCIIMV 229 (632)
Q Consensus 198 ~~~l~~~~~-~~tviiitH~~~~~~~aD~i~vl 229 (632)
.+.|+++.+ +.|+|++||++.....||++++|
T Consensus 174 ~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 174 LDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 999998854 78999999999887789999875
No 371
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=99.78 E-value=4.8e-19 Score=196.63 Aligned_cols=158 Identities=16% Similarity=0.220 Sum_probs=118.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cH-HhhcceEEEcccCc---ccc-ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PE-AEQEKIGLVSKEPI---FLF-CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~-~~r~~i~~v~Q~~~---~~~-~~~~~ 144 (632)
.+||+|++|++++|+||||||||||+++|.|+.... +. ..+..++|++|++. ++. .++.+
T Consensus 281 ~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~ 360 (510)
T PRK15439 281 NISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAW 360 (510)
T ss_pred ceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHH
Confidence 399999999999999999999999999998652110 11 12457999999852 332 23333
Q ss_pred cccccc------C---CCCCCHHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCHHH
Q 047286 145 GQYIPY------G---KQNASDEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDAQS 193 (632)
Q Consensus 145 ~~~i~~------~---~~~~~~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~~~ 193 (632)
|+.. . ......+++.++++..++. ..+.+||+|+++++ +|++||+.+
T Consensus 361 --~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~ 438 (510)
T PRK15439 361 --NVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSA 438 (510)
T ss_pred --HHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhH
Confidence 3321 0 0111123456777777664 44678999999888 399999999
Q ss_pred HHHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHh
Q 047286 194 ERIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 194 ~~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~ 244 (632)
++.+.+.|+++. ++.|+|++||+++.+.. ||++++|++|+++..|+.+++.
T Consensus 439 ~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 491 (510)
T PRK15439 439 RNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAIN 491 (510)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCC
Confidence 999999999985 47899999999998865 9999999999999999887764
No 372
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional
Probab=99.78 E-value=9.6e-19 Score=171.76 Aligned_cols=158 Identities=12% Similarity=0.111 Sum_probs=109.8
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh---hcceEEEcccCcccccccccccccccCC--CCCCHHHH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE---QEKIGLVSKEPIFLFCDFNEGQYIPYGK--QNASDEHI 160 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~---r~~i~~v~Q~~~~~~~~~~~~~~i~~~~--~~~~~~~~ 160 (632)
+||+|++|++++|+||||||||||+++|+|+......+. ....-.+.+++.++. .++..+|+.+.. .....++.
T Consensus 6 vs~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~sG~i~~~~~~~~~~~~~~~l~~-~ltv~enl~~~~~~~~~~~~~~ 84 (213)
T PRK15177 6 TDFVMGYHEHIGILAAPGSGKTTLTRLLCGLDAPDEGDFIGLRGDALPLGANSFILP-GLTGEENARMMASLYGLDGDEF 84 (213)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCCccCCCCCEEEecCceeccccccccCC-cCcHHHHHHHHHHHcCCCHHHH
Confidence 899999999999999999999999999996533222111 111112333444333 233233554421 11233333
Q ss_pred HHHH-HHccc----hhhHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHhCCceEEEEecCch
Q 047286 161 RPAV-QLANA----EKSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLVTNQTVVIVANCLI 218 (632)
Q Consensus 161 ~~~~-~~~~l----~~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~ 218 (632)
.+.+ +..++ +..+..+|.|++++++ ++++|+.+++.+.+.+.+..+++|+|++||++.
T Consensus 85 ~~~~~~~~~l~~~~~~~~~~lS~G~~qrv~la~al~~~p~llllDEP~~~lD~~~~~~~~~~l~~~~~~~~ii~vsH~~~ 164 (213)
T PRK15177 85 SHFCYQLTQLEQCYTDRVSEYSVTMKTHLAFAINLLLPCRLYIADGKLYTGDNATQLRMQAALACQLQQKGLIVLTHNPR 164 (213)
T ss_pred HHHHHHHhChhHHhhchHhhcCHHHHHHHHHHHHHhcCCCEEEECCCCccCCHHHHHHHHHHHHHHhhCCcEEEEECCHH
Confidence 3222 33333 3467789999988773 789999999999998866555678999999999
Q ss_pred HHh-hcCeEEEEeCCeEEEecChhHHh
Q 047286 219 TIR-NADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 219 ~~~-~aD~i~vl~~G~i~~~g~~~el~ 244 (632)
.+. .||++++|++|++++.++.++..
T Consensus 165 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 191 (213)
T PRK15177 165 LIKEHCHAFGVLLHGKITMCEDLAQAT 191 (213)
T ss_pred HHHHhcCeeEEEECCeEEEeCCHHHHH
Confidence 886 59999999999999999988874
No 373
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=99.78 E-value=7.2e-19 Score=168.16 Aligned_cols=123 Identities=26% Similarity=0.421 Sum_probs=94.7
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH-----------------hhcceEEEcccCcccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA-----------------EQEKIGLVSKEPIFLFCDFNEGQY 147 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~-----------------~r~~i~~v~Q~~~~~~~~~~~~~~ 147 (632)
.+||++++|++++|+||||||||||+++|.|+ ..|.+ +++.++|++|
T Consensus 17 ~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~--~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~~q-------------- 80 (180)
T cd03214 17 DLSLSIEAGEIVGILGPNGAGKSTLLKTLAGL--LKPSSGEILLDGKDLASLSPKELARKIAYVPQ-------------- 80 (180)
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHhCC--CCCCCcEEEECCEECCcCCHHHHHHHHhHHHH--------------
Confidence 38999999999999999999999999999854 32221 1112222222
Q ss_pred cccCCCCCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhC
Q 047286 148 IPYGKQNASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVT 206 (632)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~ 206 (632)
+++.+++.+ ....||.|..+++ +|++||+.+++.+.+.|.++.+
T Consensus 81 ---------------~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~ 145 (180)
T cd03214 81 ---------------ALELLGLAHLADRPFNELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQIELLELLRRLAR 145 (180)
T ss_pred ---------------HHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH
Confidence 444445443 3456788887776 3999999999999999998864
Q ss_pred --CceEEEEecCchHHh-hcCeEEEEeCCeEEEec
Q 047286 207 --NQTVVIVANCLITIR-NADCIIMVSKGKIVEKG 238 (632)
Q Consensus 207 --~~tviiitH~~~~~~-~aD~i~vl~~G~i~~~g 238 (632)
+.|+|++||+++.+. .||++++|++|++++.|
T Consensus 146 ~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 146 ERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 689999999999875 59999999999998653
No 374
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=99.78 E-value=6.7e-19 Score=185.17 Aligned_cols=120 Identities=21% Similarity=0.243 Sum_probs=91.0
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------c--------------------H------H-----
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------I--------------------Y------S----- 537 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~--------------------~------~----- 537 (632)
+|+-+++++|+||||||||||+++|.|+++|++- . . .
T Consensus 26 ~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~ 105 (353)
T TIGR03265 26 SVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNRG 105 (353)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhcC
Confidence 4444568999999999999999999999887430 0 0 0
Q ss_pred ----HHHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------------
Q 047286 538 ----WIIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------------- 581 (632)
Q Consensus 538 ----~~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------------- 581 (632)
.....+.+.+..+ |++........+||||||||+|||||+..
T Consensus 106 ~~~~~~~~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~ 183 (353)
T TIGR03265 106 MGRAEVAERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRR 183 (353)
T ss_pred CCHHHHHHHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh
Confidence 0011223344443 55555666778999999999999999554
Q ss_pred -----hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 -----CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 -----~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
+++||.++.+ .-||+|++|++|+|++.|++++++.++...|
T Consensus 184 ~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 184 LGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 7889999976 5799999999999999999999998644344
No 375
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.77 E-value=1e-18 Score=182.14 Aligned_cols=122 Identities=26% Similarity=0.281 Sum_probs=88.7
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHH---HH------------------------H-
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYS---WI------------------------I- 540 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~---~~------------------------~- 540 (632)
+|.-++++||||+||||||||+++|.|++.|++ +... .. +
T Consensus 37 ~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~ 116 (327)
T PRK11308 37 TLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILE 116 (327)
T ss_pred EECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHH
Confidence 445556999999999999999999999987642 0000 00 0
Q ss_pred ---------------HHHHHHHhcCCCccCc-ccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 541 ---------------IKCTNFIASLPQGSDL-NVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 541 ---------------~~~~~~i~~lp~g~dt-~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
..+.+++..+ |++. ........||||||||++||||+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~ 194 (327)
T PRK11308 117 EPLLINTSLSAAERREKALAMMAKV--GLRPEHYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVL 194 (327)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHC--CCChHHhcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHH
Confidence 0122333332 2221 2234556899999999999999554
Q ss_pred --------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhHH
Q 047286 582 --------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYAS 624 (632)
Q Consensus 582 --------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~ 624 (632)
++|||.++.+. .||+|+||++|+|+|.|+.+++++++...|.+
T Consensus 195 ~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~~~~p~hpyt~ 252 (327)
T PRK11308 195 NLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQIFNNPRHPYTQ 252 (327)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcCCCCHHHH
Confidence 78999999996 59999999999999999999999864445654
No 376
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.77 E-value=8.7e-19 Score=182.91 Aligned_cols=124 Identities=17% Similarity=0.177 Sum_probs=91.0
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChh---h---------h---cHHHH--------------------------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPE---Q---------V---IYSWI-------------------------- 539 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~---~---------~---~~~~~-------------------------- 539 (632)
+|.-++++||||+||||||||+++|.|+++|+ + + .....
T Consensus 38 ~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~ 117 (330)
T PRK09473 38 SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVG 117 (330)
T ss_pred EEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHH
Confidence 45555699999999999999999999999873 1 0 00000
Q ss_pred --HH----------------HHHHHHh--cCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------
Q 047286 540 --II----------------KCTNFIA--SLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------ 581 (632)
Q Consensus 540 --~~----------------~~~~~i~--~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------ 581 (632)
+. .+.+.+. .||++. ..+.....+||||||||++||||+..
T Consensus 118 ~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~-~~~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~ 196 (330)
T PRK09473 118 EQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEAR-KRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTV 196 (330)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChH-HHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHH
Confidence 00 0111111 233332 23566788999999999999999544
Q ss_pred -------------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhHHH
Q 047286 582 -------------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYASL 625 (632)
Q Consensus 582 -------------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l 625 (632)
++|||.+..+. .||+|+||++|+|+|.|+.+++.+++...|.+.
T Consensus 197 ~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~~i~~~p~~pyt~~ 260 (330)
T PRK09473 197 QAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPSHPYSIG 260 (330)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHH
Confidence 78999999986 699999999999999999999998655566653
No 377
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=99.77 E-value=1e-18 Score=183.50 Aligned_cols=123 Identities=21% Similarity=0.259 Sum_probs=92.5
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH--------------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI-------------------------- 539 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~-------------------------- 539 (632)
++-+|+-++.++|+||||||||||+++|.|+++|++ ......
T Consensus 12 vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~TV~eN 91 (363)
T TIGR01186 12 ADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHMTILQN 91 (363)
T ss_pred eEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCCCHHHH
Confidence 334566667999999999999999999999998743 011000
Q ss_pred H---------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 540 I---------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 540 ~---------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
+ ..+.+.+..+ |++........+||||||||++||||+..
T Consensus 92 i~~~~~~~~~~~~~~~~~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~ 169 (363)
T TIGR01186 92 TSLGPELLGWPEQERKEKALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQ 169 (363)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHH
Confidence 0 0112233322 56666778888999999999999999544
Q ss_pred --------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 --------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 --------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
+++||.++.+ +.||+|++|++|+|++.|+++|+++++...|
T Consensus 170 ~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 170 DELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 7889999865 6799999999999999999999997643334
No 378
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=99.77 E-value=6.8e-19 Score=195.37 Aligned_cols=157 Identities=16% Similarity=0.224 Sum_probs=117.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-C---------------c-HHhhcceEEEcccC---ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-A---------------P-EAEQEKIGLVSKEP---IFLFCDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-~---------------~-~~~r~~i~~v~Q~~---~~~~~~~~~ 144 (632)
.+||+|++||+++|+||||||||||+++|+|...+ . + ...+++++|++|++ .++. ..+.
T Consensus 278 ~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~-~~tv 356 (500)
T TIGR02633 278 DVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVP-ILGV 356 (500)
T ss_pred cceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCC-CCCH
Confidence 39999999999999999999999999999876321 0 0 12356799999996 2333 2222
Q ss_pred ccccccCC----C---CCC----HHHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCH
Q 047286 145 GQYIPYGK----Q---NAS----DEHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDA 191 (632)
Q Consensus 145 ~~~i~~~~----~---~~~----~~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~ 191 (632)
.+|+.++. . ... .+++.++++.+++. ..+..||+|+++++ +|++||+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~ 436 (500)
T TIGR02633 357 GKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDV 436 (500)
T ss_pred HHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCH
Confidence 22444321 0 011 23466777777663 34678999999888 3999999
Q ss_pred HHHHHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhH
Q 047286 192 QSERIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDE 242 (632)
Q Consensus 192 ~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~e 242 (632)
.+++.+++.++++. ++.|+|++||+++.+.. ||++++|++|+++..++.++
T Consensus 437 ~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~ 489 (500)
T TIGR02633 437 GAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHA 489 (500)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEcccc
Confidence 99999999999885 47899999999998865 99999999999998775443
No 379
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.77 E-value=1.1e-18 Score=173.82 Aligned_cols=121 Identities=36% Similarity=0.420 Sum_probs=97.8
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHH--------------------------
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSW-------------------------- 538 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~-------------------------- 538 (632)
++.-+|.-+++++|+||+|||||||+++|.|++.|++. ....
T Consensus 21 ~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~~~~~~ 100 (229)
T cd03254 21 DINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSGTIMENIRLG 100 (229)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhhHHHHHHhcc
Confidence 33445556679999999999999999999999876320 0000
Q ss_pred -------H------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 539 -------I------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 539 -------~------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
. ..++.+++..+|.|+++.++....+||||||||++||||+..
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~ 180 (229)
T cd03254 101 RPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQE 180 (229)
T ss_pred CCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHH
Confidence 0 013346778888999999999999999999999999999554
Q ss_pred -----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.+..+..||+|++|++|++++.|+.++++.+
T Consensus 181 ~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 181 ALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred HHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 678999999989999999999999999999998875
No 380
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=99.77 E-value=9.2e-19 Score=171.87 Aligned_cols=121 Identities=26% Similarity=0.335 Sum_probs=85.7
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh--------hcH-HH-----------------H---------H--
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ--------VIY-SW-----------------I---------I-- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~--------~~~-~~-----------------~---------~-- 540 (632)
++-+|+-++.+|+.||||||||||+++|.|+..|++ .+. .. + +
T Consensus 21 i~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa~NIAF 100 (345)
T COG1118 21 ISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVADNIAF 100 (345)
T ss_pred ceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeEEEechhhcccchHHhhhhh
Confidence 344566667899999999999999999999988864 000 00 0 0
Q ss_pred ---------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 541 ---------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 541 ---------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
..+++.+.-. .++-.-.....+||||||||+|||||+.-
T Consensus 101 Gl~~~~~~p~~~~~r~rv~elL~lv--qL~~la~ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~ 178 (345)
T COG1118 101 GLKVRKERPSEAEIRARVEELLRLV--QLEGLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRR 178 (345)
T ss_pred cccccccCCChhhHHHHHHHHHHHh--cccchhhcCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHH
Confidence 0111211110 11111123467999999999999999321
Q ss_pred -------------hccccchh-hhhcCCEEEEEeCCeEeeecChHHHhccCCc
Q 047286 582 -------------CGCGSPPY-HYKNADITSVVKNGVIAEKGRHDALMKITDG 620 (632)
Q Consensus 582 -------------~~iahrl~-~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g 620 (632)
+.+||... +.+.||||+||++|+|++.|+.+|...+++.
T Consensus 179 wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s 231 (345)
T COG1118 179 WLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPAS 231 (345)
T ss_pred HHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCc
Confidence 78999866 4578999999999999999999999876543
No 381
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=99.77 E-value=2.1e-18 Score=162.07 Aligned_cols=108 Identities=23% Similarity=0.413 Sum_probs=85.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH------------------hhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA------------------EQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~------------------~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
.++|++++||+++|+||||||||||+++|.|.. .|.. .++.++|++|
T Consensus 18 ~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~--~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q------------- 82 (163)
T cd03216 18 GVSLSVRRGEVHALLGENGAGKSTLMKILSGLY--KPDSGEILVDGKEVSFASPRDARRAGIAMVYQ------------- 82 (163)
T ss_pred eeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCC--CCCCeEEEECCEECCcCCHHHHHhcCeEEEEe-------------
Confidence 389999999999999999999999999998553 2211 1222333333
Q ss_pred ccccCCCCCCHHHHHHHHHHccchhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-CCc
Q 047286 147 YIPYGKQNASDEHIRPAVQLANAEKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-TNQ 208 (632)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~~ 208 (632)
||.|+.+++ +|++||+.+++.+.+.++++. ++.
T Consensus 83 -----------------------------LS~G~~qrl~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~ 133 (163)
T cd03216 83 -----------------------------LSVGERQMVEIARALARNARLLILDEPTAALTPAEVERLFKVIRRLRAQGV 133 (163)
T ss_pred -----------------------------cCHHHHHHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCC
Confidence 455544444 489999999999999999885 478
Q ss_pred eEEEEecCchHHhh-cCeEEEEeCCeEEE
Q 047286 209 TVVIVANCLITIRN-ADCIIMVSKGKIVE 236 (632)
Q Consensus 209 tviiitH~~~~~~~-aD~i~vl~~G~i~~ 236 (632)
|+|++||++..+.. ||++++|++|++++
T Consensus 134 tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 134 AVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999998765 99999999999875
No 382
>COG4167 SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=99.77 E-value=4.2e-18 Score=154.46 Aligned_cols=168 Identities=18% Similarity=0.314 Sum_probs=126.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCcc-ccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPIF-LFCDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~~-~~~~~~~~~~i 148 (632)
.+||++++|+.+||+|.||||||||.|+|.|+.... .....++|-+++|+|.- |+..++....+
T Consensus 31 ~vSFtL~~~QTlaiIG~NGSGKSTLakMlaGmi~PTsG~il~n~~~L~~~Dy~~R~k~IRMiFQDpnts~NPRl~iGqiL 110 (267)
T COG4167 31 PVSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGEILINDHPLHFGDYSFRSKRIRMIFQDPNTSLNPRLRIGQIL 110 (267)
T ss_pred ceEEEecCCcEEEEEccCCCcHhHHHHHHhcccCCCCceEEECCccccccchHhhhhheeeeecCCccccChhhhhhhHh
Confidence 399999999999999999999999999998653221 11234679999999852 22222111000
Q ss_pred ccC-------CCCCCHHHHHHHHHHccchh-----hHhhCCcccccccc-----------------cCCCCHHHHHHHHH
Q 047286 149 PYG-------KQNASDEHIRPAVQLANAEK-----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQA 199 (632)
Q Consensus 149 ~~~-------~~~~~~~~~~~~~~~~~l~~-----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~ 199 (632)
... .+....+++.+.++.+++-. .+..++.|.+++|+ .++||...+.++.+
T Consensus 111 d~PL~l~T~~~~~~R~~~i~~TL~~VGL~Pdhan~~~~~la~~QKQRVaLARALIL~P~iIIaDeAl~~LD~smrsQl~N 190 (267)
T COG4167 111 DFPLRLNTDLEPEQRRKQIFETLRMVGLLPDHANYYPHMLAPGQKQRVALARALILRPKIIIADEALASLDMSMRSQLIN 190 (267)
T ss_pred cchhhhcccCChHHHHHHHHHHHHHhccCccccccchhhcCchhHHHHHHHHHHhcCCcEEEehhhhhhccHHHHHHHHH
Confidence 000 01123456778888888643 46677888888884 67999999999999
Q ss_pred HHHHHh--CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCCCcHHH
Q 047286 200 AMVKLV--TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDPEGAYS 252 (632)
Q Consensus 200 ~l~~~~--~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~~~~~~ 252 (632)
...++. .|.+.|.|+.++..+++ +|+|+||++|+++|.|++.+++..|.....
T Consensus 191 L~LeLQek~GiSyiYV~QhlG~iKHi~D~viVM~EG~vvE~G~t~~v~a~P~~~~T 246 (267)
T COG4167 191 LMLELQEKQGISYIYVTQHIGMIKHISDQVLVMHEGEVVERGSTADVLASPLHELT 246 (267)
T ss_pred HHHHHHHHhCceEEEEechhhHhhhhcccEEEEecCceeecCChhhhhcCCccHHH
Confidence 998885 37899999999999998 999999999999999999999988765443
No 383
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.77 E-value=8.6e-19 Score=169.20 Aligned_cols=108 Identities=26% Similarity=0.306 Sum_probs=77.7
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhhc------------------------HHHH-------------
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQVI------------------------YSWI------------- 539 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~~------------------------~~~~------------- 539 (632)
+++-+|.-+++|+||||||||||||++++.|+.+|++.. ..|+
T Consensus 21 ~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~ 100 (248)
T COG1116 21 DINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQEDALLPWLTVLDNVALGLELR 100 (248)
T ss_pred cceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEeccCcccchhhHHhhheehhhcc
Confidence 344466667799999999999999999999998885410 0111
Q ss_pred -------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------------
Q 047286 540 -------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------------- 581 (632)
Q Consensus 540 -------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------------- 581 (632)
...+.+++... |+.---.....+||||||||+|||||+..
T Consensus 101 ~~~~~e~~~~a~~~L~~V--gL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~ 178 (248)
T COG1116 101 GKSKAEARERAKELLELV--GLAGFEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWE 178 (248)
T ss_pred ccchHhHHHHHHHHHHHc--CCcchhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHH
Confidence 11233444432 44444455678999999999999999543
Q ss_pred ------hccccchh-hhhcCCEEEEEeC--CeEe
Q 047286 582 ------CGCGSPPY-HYKNADITSVVKN--GVIA 606 (632)
Q Consensus 582 ------~~iahrl~-~~~~aD~I~vl~~--G~iv 606 (632)
+.|||..+ .+.-||||+||.+ |+|.
T Consensus 179 ~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 179 ETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred hhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 78999865 4578999999999 5553
No 384
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=99.77 E-value=1.9e-18 Score=168.30 Aligned_cols=143 Identities=16% Similarity=0.217 Sum_probs=110.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~ 149 (632)
.+||+|++||+++|+|+||||||||+++|+|..... ....+++++|++|++.++. .++.+ |+.
T Consensus 18 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e--~l~ 95 (201)
T cd03231 18 GLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSVLE--NLR 95 (201)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEeccccccCCCcCHHH--HHH
Confidence 499999999999999999999999999998653211 1234678999999986543 34444 565
Q ss_pred cCCCCCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-CC
Q 047286 150 YGKQNASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-TN 207 (632)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~ 207 (632)
+.......+++.++++..++.+ ....||+|.++++ +|++||+.+++.+.+.|+++. ++
T Consensus 96 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g 175 (201)
T cd03231 96 FWHADHSDEQVEEALARVGLNGFEDRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARG 175 (201)
T ss_pred hhcccccHHHHHHHHHHcCChhhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 5433335667788888887753 4567889988877 399999999999999998875 47
Q ss_pred ceEEEEecCchHHh-hcCeEEEE
Q 047286 208 QTVVIVANCLITIR-NADCIIMV 229 (632)
Q Consensus 208 ~tviiitH~~~~~~-~aD~i~vl 229 (632)
.|+|++||+...+. .|++++.+
T Consensus 176 ~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 176 GMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred CEEEEEecCchhhhhccceeEec
Confidence 89999999877664 58999876
No 385
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.77 E-value=5.6e-19 Score=164.64 Aligned_cols=123 Identities=24% Similarity=0.256 Sum_probs=85.2
Q ss_pred CcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh-------------------hcHHHH-----------------
Q 047286 496 STVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ-------------------VIYSWI----------------- 539 (632)
Q Consensus 496 ~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~-------------------~~~~~~----------------- 539 (632)
..+..+|.-+.++|++|||||||||+++.+.|+.|..+ ++...+
T Consensus 24 ~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPFp~S 103 (253)
T COG1117 24 KDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPFPMS 103 (253)
T ss_pred ccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCCCch
Confidence 34445666667899999999999999999999876521 111111
Q ss_pred ----------HH-----HHHHHHhc------CCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------
Q 047286 540 ----------II-----KCTNFIAS------LPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------- 581 (632)
Q Consensus 540 ----------~~-----~~~~~i~~------lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------- 581 (632)
+. .+++.++. |=+-..-.+.+.+..|||||+||+|||||+--
T Consensus 104 IydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPI 183 (253)
T COG1117 104 IYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPI 183 (253)
T ss_pred HHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCch
Confidence 00 11111111 00111123446788899999999999999321
Q ss_pred ------------------hccccchhh-hhcCCEEEEEeCCeEeeecChHHHhccC
Q 047286 582 ------------------CGCGSPPYH-YKNADITSVVKNGVIAEKGRHDALMKIT 618 (632)
Q Consensus 582 ------------------~~iahrl~~-~~~aD~I~vl~~G~ive~G~h~eL~~~~ 618 (632)
+++||.+.- .|-+|+..++..|++||.|.-+++-.++
T Consensus 184 sT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~P 239 (253)
T COG1117 184 STLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTNP 239 (253)
T ss_pred hHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcCc
Confidence 788999764 4679999999999999999999998763
No 386
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=99.77 E-value=1.4e-18 Score=182.36 Aligned_cols=120 Identities=22% Similarity=0.227 Sum_probs=88.0
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh--------------------------------cH------HHH---
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQV--------------------------------IY------SWI--- 539 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~--------------------------------~~------~~~--- 539 (632)
+|.-++.++|+||||||||||+++|.|+++|++- .. ...
T Consensus 28 ~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~ 107 (351)
T PRK11432 28 TIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG 107 (351)
T ss_pred EEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC
Confidence 4444568999999999999999999999988530 00 000
Q ss_pred ------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------------
Q 047286 540 ------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------------- 581 (632)
Q Consensus 540 ------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------------- 581 (632)
...+.+.+..+ |+..........||||||||+|||||+..
T Consensus 108 ~~~~~~~~~v~~~l~~~--gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~ 185 (351)
T PRK11432 108 VPKEERKQRVKEALELV--DLAGFEDRYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ 185 (351)
T ss_pred CCHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh
Confidence 00111222222 44433455667999999999999999654
Q ss_pred -----hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 -----CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 -----~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
+++||.++.+ .-||+|+||++|+|++.|+++++.+++...|
T Consensus 186 ~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~ 232 (351)
T PRK11432 186 FNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRF 232 (351)
T ss_pred cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchH
Confidence 7889999876 5699999999999999999999998754433
No 387
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=99.76 E-value=2e-18 Score=195.54 Aligned_cols=158 Identities=18% Similarity=0.262 Sum_probs=123.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCcccc-ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYI 148 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i 148 (632)
++|+++++||+++|+||||||||||+++|.|..... ....++.++||+|++.++. .++.+ |+
T Consensus 43 ~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV~e--~l 120 (617)
T TIGR00955 43 NVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTVRE--HL 120 (617)
T ss_pred CCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcHHH--HH
Confidence 499999999999999999999999999998643211 1235678999999998664 36655 56
Q ss_pred ccCCC-----CCC----HHHHHHHHHHccchh----hH------hhCCccccccc-----------------ccCCCCHH
Q 047286 149 PYGKQ-----NAS----DEHIRPAVQLANAEK----SI------DKLPLGLDTVV-----------------ATNAVDAQ 192 (632)
Q Consensus 149 ~~~~~-----~~~----~~~~~~~~~~~~l~~----~i------~~l~~g~~~~v-----------------~ts~LD~~ 192 (632)
.++.. ... .++++++++..++.+ .+ ..+|+|.++++ +|+|||+.
T Consensus 121 ~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~ 200 (617)
T TIGR00955 121 MFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSF 200 (617)
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHH
Confidence 54311 111 234667777776643 23 25889998888 39999999
Q ss_pred HHHHHHHHHHHHhC-CceEEEEecCch-H-HhhcCeEEEEeCCeEEEecChhHHh
Q 047286 193 SERIVQAAMVKLVT-NQTVVIVANCLI-T-IRNADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 193 ~~~~i~~~l~~~~~-~~tviiitH~~~-~-~~~aD~i~vl~~G~i~~~g~~~el~ 244 (632)
++..+.+.++++.+ ++|+|+++|+++ . .+.+|++++|++|++++.|+++++.
T Consensus 201 ~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~ 255 (617)
T TIGR00955 201 MAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAV 255 (617)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHH
Confidence 99999999999864 789999999985 3 4679999999999999999999874
No 388
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=99.76 E-value=1.8e-18 Score=182.11 Aligned_cols=123 Identities=21% Similarity=0.205 Sum_probs=90.0
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHH--------------------HHH-----
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYS--------------------WII----- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~--------------------~~~----- 540 (632)
++-+|.-++.+||+||||||||||+++|.|+++|++. ... .-+
T Consensus 23 vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~ 102 (356)
T PRK11650 23 IDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVRENMAYGLK 102 (356)
T ss_pred eeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHh
Confidence 3345555668999999999999999999999887430 000 000
Q ss_pred ----------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------------
Q 047286 541 ----------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------------- 581 (632)
Q Consensus 541 ----------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------------- 581 (632)
..+.+.+..+ |++........+||||||||+|||||+..
T Consensus 103 ~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l 180 (356)
T PRK11650 103 IRGMPKAEIEERVAEAARIL--ELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRL 180 (356)
T ss_pred hcCCCHHHHHHHHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH
Confidence 0112222222 45544555667999999999999999544
Q ss_pred --------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 --------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 --------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
+++||.+..+ +.||+|++|++|+|++.|+.+|+++++...|
T Consensus 181 ~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (356)
T PRK11650 181 HRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPASTF 230 (356)
T ss_pred HHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCccHH
Confidence 7889998765 5799999999999999999999998644344
No 389
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=99.76 E-value=1.5e-18 Score=171.92 Aligned_cols=153 Identities=21% Similarity=0.295 Sum_probs=105.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh--hc-ceEEEcccCcccccccccccccccCCC--CCC---
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE--QE-KIGLVSKEPIFLFCDFNEGQYIPYGKQ--NAS--- 156 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~--r~-~i~~v~Q~~~~~~~~~~~~~~i~~~~~--~~~--- 156 (632)
.+||+|++|++++|+||||||||||+++|.|+......++ .. .+....+... +....+..+|+.+... ...
T Consensus 40 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~-~~~~~tv~enl~~~~~~~~~~~~~ 118 (224)
T cd03220 40 DVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLLGLGGG-FNPELTGRENIYLNGRLLGLSRKE 118 (224)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhhccccc-CCCCCcHHHHHHHHHHHcCCCHHH
Confidence 3999999999999999999999999999996532211110 00 0111111111 2222222234443211 111
Q ss_pred -HHHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-CCceEEEE
Q 047286 157 -DEHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-TNQTVVIV 213 (632)
Q Consensus 157 -~~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~~tviii 213 (632)
.+++.++++..++. ..+..||+|.++++ +|++||+.+++.+.+.++++. ++.|+|++
T Consensus 119 ~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~ 198 (224)
T cd03220 119 IDEKIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILV 198 (224)
T ss_pred HHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 23455666666654 35678899998877 399999999999999999875 46899999
Q ss_pred ecCchHHh-hcCeEEEEeCCeEEEec
Q 047286 214 ANCLITIR-NADCIIMVSKGKIVEKG 238 (632)
Q Consensus 214 tH~~~~~~-~aD~i~vl~~G~i~~~g 238 (632)
||+++.+. .||++++|++|++++.|
T Consensus 199 sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 199 SHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred eCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999876 49999999999998764
No 390
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.76 E-value=2.1e-18 Score=179.93 Aligned_cols=122 Identities=20% Similarity=0.217 Sum_probs=89.2
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCCh----hh---------h---cHHHH-------------------------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNP----EQ---------V---IYSWI------------------------- 539 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~----~~---------~---~~~~~------------------------- 539 (632)
+|.-++++||||+||||||||+++|.|+++| ++ + .....
T Consensus 29 ~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v 108 (326)
T PRK11022 29 SVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTV 108 (326)
T ss_pred EECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCH
Confidence 4555568999999999999999999999873 11 0 00000
Q ss_pred ---H----------------HHHHHHHhcCCCccC---cccccCCCCCChHHHHHHHHHHHHhh----------------
Q 047286 540 ---I----------------IKCTNFIASLPQGSD---LNVGERGLQLSGGLKQRIARTRARNY---------------- 581 (632)
Q Consensus 540 ---~----------------~~~~~~i~~lp~g~d---t~vge~G~~LSgGQrQRiaiARA~~~---------------- 581 (632)
+ ..+.+.+..+ |++ ........+||||||||++||||+..
T Consensus 109 ~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~--gL~~~~~~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~ 186 (326)
T PRK11022 109 GFQIMEAIKVHQGGNKKTRRQRAIDLLNQV--GIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDV 186 (326)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHC--CCCChHHHHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCH
Confidence 0 0111222222 342 23456778999999999999999544
Q ss_pred ---------------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchhHH
Q 047286 582 ---------------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTYAS 624 (632)
Q Consensus 582 ---------------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~ 624 (632)
+++||.++.+ +.||+|+||++|+|+|.|+.+++++++...|.+
T Consensus 187 ~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~~~~~~p~hpyt~ 251 (326)
T PRK11022 187 TIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKAHDIFRAPRHPYTQ 251 (326)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhhCCCChHHH
Confidence 7889999988 579999999999999999999999765555654
No 391
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.76 E-value=1.8e-18 Score=171.14 Aligned_cols=113 Identities=25% Similarity=0.221 Sum_probs=92.1
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHH---------------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSW--------------------------- 538 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~--------------------------- 538 (632)
+.-+|.-++.+||+||+|||||||+++|.|++.|.+. ....
T Consensus 23 i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~~tv~enl~~~~ 102 (221)
T cd03244 23 ISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISIIPQDPVLFSGTIRSNLDPFG 102 (221)
T ss_pred eEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEEEECCCCccccchHHHHhCcCC
Confidence 3334555568999999999999999999999876420 0000
Q ss_pred -----------HHHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 539 -----------IIIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 539 -----------~~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
....+.+++..+|.|+++..++.+.+||||||||++||||+..
T Consensus 103 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l 182 (221)
T cd03244 103 EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTI 182 (221)
T ss_pred CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHH
Confidence 0113457888899999999999999999999999999999654
Q ss_pred ---------hccccchhhhhcCCEEEEEeCCeEeeecC
Q 047286 582 ---------CGCGSPPYHYKNADITSVVKNGVIAEKGR 610 (632)
Q Consensus 582 ---------~~iahrl~~~~~aD~I~vl~~G~ive~G~ 610 (632)
++++|++..+..||+|++|++|++++.|+
T Consensus 183 ~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 183 REAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred HHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 68899999999999999999999999886
No 392
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.76 E-value=4.4e-18 Score=170.53 Aligned_cols=157 Identities=15% Similarity=0.180 Sum_probs=112.9
Q ss_pred EEEEee-----CCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH--hh-cceEEEcccCcc-cccccccccccccCCCC--
Q 047286 86 FLQHVP-----SGTTVALVGQSGSGKSTVINLVESFRFYAPEA--EQ-EKIGLVSKEPIF-LFCDFNEGQYIPYGKQN-- 154 (632)
Q Consensus 86 ~~~~i~-----~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~--~r-~~i~~v~Q~~~~-~~~~~~~~~~i~~~~~~-- 154 (632)
++++++ +||+++|+||||||||||+++|.|+....... +. ..++|++|++.. +..++.+ ++.+....
T Consensus 13 ~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~L~G~~~p~~G~i~~~g~~i~~~~q~~~~~~~~tv~e--~l~~~~~~~~ 90 (246)
T cd03237 13 FTLEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELDTVSYKPQYIKADYEGTVRD--LLSSITKDFY 90 (246)
T ss_pred EEEEEecCCcCCCCEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCceEEEecccccCCCCCCHHH--HHHHHhhhcc
Confidence 677775 79999999999999999999999653322111 11 279999999864 3445544 44332111
Q ss_pred CCHHHHHHHHHHccch----hhHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHhC--CceEE
Q 047286 155 ASDEHIRPAVQLANAE----KSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLVT--NQTVV 211 (632)
Q Consensus 155 ~~~~~~~~~~~~~~l~----~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~~--~~tvi 211 (632)
...+...++++.+++. ..+..||+|..++++ |++||+.++..+.+.|+++.+ ++|+|
T Consensus 91 ~~~~~~~~~l~~l~l~~~~~~~~~~LSgGe~qrv~iaraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii 170 (246)
T cd03237 91 THPYFKTEIAKPLQIEQILDREVPELSGGELQRVAIAACLSKDADIYLLDEPSAYLDVEQRLMASKVIRRFAENNEKTAF 170 (246)
T ss_pred ccHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEE
Confidence 1123345677777665 346789999988873 999999999999999999853 78999
Q ss_pred EEecCchHHhh-cCeEEEEeCCeEE--EecChhHHh
Q 047286 212 IVANCLITIRN-ADCIIMVSKGKIV--EKGTHDELI 244 (632)
Q Consensus 212 iitH~~~~~~~-aD~i~vl~~G~i~--~~g~~~el~ 244 (632)
++||+++.+.. ||++++|+++..+ ..+++.++.
T Consensus 171 ivsHd~~~~~~~~d~i~~l~~~~~~~~~~~~~~~~~ 206 (246)
T cd03237 171 VVEHDIIMIDYLADRLIVFEGEPSVNGVANPPQSLR 206 (246)
T ss_pred EEeCCHHHHHHhCCEEEEEcCCCeeEEEeCCchHHH
Confidence 99999998875 9999999765443 345555543
No 393
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=99.76 E-value=2.8e-18 Score=171.54 Aligned_cols=116 Identities=23% Similarity=0.264 Sum_probs=89.0
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cHHHH---------------------H------
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IYSWI---------------------I------ 540 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~~~~---------------------~------ 540 (632)
-+|.-++++||+||+|||||||+++|.|+++|++ + ..... +
T Consensus 22 ~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~ 101 (236)
T TIGR03864 22 FTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAAL 101 (236)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHh
Confidence 3455566999999999999999999999988743 0 00000 0
Q ss_pred ---------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------------
Q 047286 541 ---------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------------ 581 (632)
Q Consensus 541 ---------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------------ 581 (632)
..+.+++..+ |++........+||||||||++||||+..
T Consensus 102 ~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~ 179 (236)
T TIGR03864 102 HGLSRAEARERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALC 179 (236)
T ss_pred cCCCHHHHHHHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHH
Confidence 0122334333 55555666778999999999999999544
Q ss_pred -------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+..||+|++|++|++++.|+++++.+.
T Consensus 180 ~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 180 RDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred HhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 688999999888999999999999999999999874
No 394
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=99.76 E-value=2.9e-18 Score=180.23 Aligned_cols=128 Identities=23% Similarity=0.262 Sum_probs=91.5
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc---HHH----H---------------------H
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI---YSW----I---------------------I 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---~~~----~---------------------~ 540 (632)
++-+|+-++++||+||||||||||+++|.|++.|++ +. ... . +
T Consensus 24 vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni 103 (343)
T PRK11153 24 VSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRTVFDNV 103 (343)
T ss_pred eEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHH
Confidence 333555567999999999999999999999988743 00 000 0 0
Q ss_pred ---------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 541 ---------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 541 ---------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
..+.+.+..+ |++........+||||||||++||||+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~ 181 (343)
T PRK11153 104 ALPLELAGTPKAEIKARVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILE 181 (343)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH
Confidence 0111223322 44444455667899999999999999554
Q ss_pred -------------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhccCCch-hHHHHH
Q 047286 582 -------------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKITDGT-YASLTA 627 (632)
Q Consensus 582 -------------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~~~g~-y~~l~~ 627 (632)
+++||+++.+.. ||+|++|++|+|++.|++++++..+... ++.++.
T Consensus 182 ~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 242 (343)
T PRK11153 182 LLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKHPLTREFIQ 242 (343)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHHHHHHHh
Confidence 688999998864 9999999999999999999998753333 334443
No 395
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=99.75 E-value=3.2e-18 Score=194.16 Aligned_cols=156 Identities=19% Similarity=0.271 Sum_probs=116.5
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh----hcceEEEcccCcc-cccccccccccccCCCCCCHHHH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE----QEKIGLVSKEPIF-LFCDFNEGQYIPYGKQNASDEHI 160 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~----r~~i~~v~Q~~~~-~~~~~~~~~~i~~~~~~~~~~~~ 160 (632)
+||+|++|++++|+||||||||||+++|.|....+...+ ..++||++|++.. +.......+++.........+++
T Consensus 331 isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~igy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 410 (638)
T PRK10636 331 IKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEFLRADESPLQHLARLAPQELEQKL 410 (638)
T ss_pred ceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCCEEEEEecCcchhhCCccchHHHHHHHhCchhhHHHH
Confidence 999999999999999999999999999996543222111 2369999997521 12111111122111112234567
Q ss_pred HHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecCch
Q 047286 161 RPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLI 218 (632)
Q Consensus 161 ~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~ 218 (632)
.++++..++. ..+..||+|.++++ +|++||+.+...+.+.|.++ +.|+|+|||+..
T Consensus 411 ~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~ 488 (638)
T PRK10636 411 RDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRH 488 (638)
T ss_pred HHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHH
Confidence 7788887763 35788999999888 39999999999999999987 359999999999
Q ss_pred HHhh-cCeEEEEeCCeEE-EecChhHH
Q 047286 219 TIRN-ADCIIMVSKGKIV-EKGTHDEL 243 (632)
Q Consensus 219 ~~~~-aD~i~vl~~G~i~-~~g~~~el 243 (632)
.+.. ||+|++|++|+++ ..|++++.
T Consensus 489 ~~~~~~d~i~~l~~G~i~~~~g~~~~~ 515 (638)
T PRK10636 489 LLRSTTDDLYLVHDGKVEPFDGDLEDY 515 (638)
T ss_pred HHHHhCCEEEEEECCEEEEcCCCHHHH
Confidence 8865 9999999999997 67888775
No 396
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.75 E-value=3.6e-18 Score=168.06 Aligned_cols=145 Identities=11% Similarity=0.176 Sum_probs=109.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCc------------HHhhcceEEEcccCccccc-ccccccccccC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAP------------EAEQEKIGLVSKEPIFLFC-DFNEGQYIPYG 151 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~------------~~~r~~i~~v~Q~~~~~~~-~~~~~~~i~~~ 151 (632)
.+||++++||+++|+||||||||||+++|.|...... ...++.++|++|++.++.. ++.+ |+.+.
T Consensus 29 ~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~~~q~~~~~~~~t~~e--~l~~~ 106 (214)
T PRK13543 29 PLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAYLGHLPGLKADLSTLE--NLHFL 106 (214)
T ss_pred cceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEEeecCcccccCCcHHH--HHHHH
Confidence 3999999999999999999999999999986532110 1124569999999876543 4444 44332
Q ss_pred C---CCCCHHHHHHHHHHccc----hhhHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHh-C
Q 047286 152 K---QNASDEHIRPAVQLANA----EKSIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLV-T 206 (632)
Q Consensus 152 ~---~~~~~~~~~~~~~~~~l----~~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~-~ 206 (632)
. .....+...++++..++ +..+..||.|.+++++ |++||+.+++.+.+.++++. +
T Consensus 107 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~ 186 (214)
T PRK13543 107 CGLHGRRAKQMPGSALAIVGLAGYEDTLVRQLSAGQKKRLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRG 186 (214)
T ss_pred HHhcCCcHHHHHHHHHHHcCChhhccCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhC
Confidence 1 11123455667777765 4556789999988773 89999999999999998874 4
Q ss_pred CceEEEEecCchHHhh-cCeEEEEeC
Q 047286 207 NQTVVIVANCLITIRN-ADCIIMVSK 231 (632)
Q Consensus 207 ~~tviiitH~~~~~~~-aD~i~vl~~ 231 (632)
+.|+|++||+++.+.. ||++++++.
T Consensus 187 ~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 187 GGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCEEEEEecChhhhhhhcceEEEEee
Confidence 6899999999998865 999999864
No 397
>COG4167 SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=99.75 E-value=2.6e-18 Score=155.82 Aligned_cols=127 Identities=24% Similarity=0.282 Sum_probs=90.1
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh--------------------------------hcHHHHHH-------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ--------------------------------VIYSWIII------- 541 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~--------------------------------~~~~~~~~------- 541 (632)
.++-++++||+|.+|||||||+++|.|..+|++ ++....+-
T Consensus 35 tL~~~QTlaiIG~NGSGKSTLakMlaGmi~PTsG~il~n~~~L~~~Dy~~R~k~IRMiFQDpnts~NPRl~iGqiLd~PL 114 (267)
T COG4167 35 TLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGEILINDHPLHFGDYSFRSKRIRMIFQDPNTSLNPRLRIGQILDFPL 114 (267)
T ss_pred EecCCcEEEEEccCCCcHhHHHHHHhcccCCCCceEEECCccccccchHhhhhheeeeecCCccccChhhhhhhHhcchh
Confidence 445567999999999999999999999998854 00000000
Q ss_pred -------------HHH---HHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 542 -------------KCT---NFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 542 -------------~~~---~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
.+. ..|.-+|+--+. ....||-|||||+|+|||++.
T Consensus 115 ~l~T~~~~~~R~~~i~~TL~~VGL~Pdhan~----~~~~la~~QKQRVaLARALIL~P~iIIaDeAl~~LD~smrsQl~N 190 (267)
T COG4167 115 RLNTDLEPEQRRKQIFETLRMVGLLPDHANY----YPHMLAPGQKQRVALARALILRPKIIIADEALASLDMSMRSQLIN 190 (267)
T ss_pred hhcccCChHHHHHHHHHHHHHhccCcccccc----chhhcCchhHHHHHHHHHHhcCCcEEEehhhhhhccHHHHHHHHH
Confidence 011 122233332221 235699999999999999654
Q ss_pred -------------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhccC-CchhHHHHHhhhc
Q 047286 582 -------------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKIT-DGTYASLTALHMS 631 (632)
Q Consensus 582 -------------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~~-~g~y~~l~~~~~~ 631 (632)
|.++..+-.|++ +|+|+||++|++||+|+..+++..+ ...-++|++++++
T Consensus 191 L~LeLQek~GiSyiYV~QhlG~iKHi~D~viVM~EG~vvE~G~t~~v~a~P~~~~TkRlieShFg 255 (267)
T COG4167 191 LMLELQEKQGISYIYVTQHIGMIKHISDQVLVMHEGEVVERGSTADVLASPLHELTKRLIESHFG 255 (267)
T ss_pred HHHHHHHHhCceEEEEechhhHhhhhcccEEEEecCceeecCChhhhhcCCccHHHHHHHHHHhc
Confidence 566666777775 9999999999999999999998753 3456778877654
No 398
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.75 E-value=3.9e-18 Score=177.94 Aligned_cols=122 Identities=22% Similarity=0.162 Sum_probs=88.2
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cHHH------------------H-----H-HHH-
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IYSW------------------I-----I-IKC- 543 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~~~------------------~-----~-~~~- 543 (632)
+|.-++++||||+||||||||+++|+|+++|++ + .... + + .++
T Consensus 43 ~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~ 122 (331)
T PRK15079 43 RLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIA 122 (331)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHH
Confidence 455556999999999999999999999987743 0 0000 0 0 000
Q ss_pred -------------------HHHHhcCCCccC-cccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 544 -------------------TNFIASLPQGSD-LNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 544 -------------------~~~i~~lp~g~d-t~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
.+.+..+ |++ ........+||||||||++||||+..
T Consensus 123 ~~l~~~~~~~~~~~~~~~~~~~l~~v--gl~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i 200 (331)
T PRK15079 123 EPLRTYHPKLSRQEVKDRVKAMMLKV--GLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQV 200 (331)
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHH
Confidence 0111111 231 12345567899999999999999544
Q ss_pred ---------------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhccCCchhHH
Q 047286 582 ---------------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKITDGTYAS 624 (632)
Q Consensus 582 ---------------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~ 624 (632)
+++||.+..+.. ||+|+||++|+|+|.|+.+++++++...|.+
T Consensus 201 ~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 201 VNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCCHHHH
Confidence 788999999975 9999999999999999999999764445654
No 399
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.75 E-value=3.5e-18 Score=170.75 Aligned_cols=121 Identities=23% Similarity=0.273 Sum_probs=86.7
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cH---HHH------------------H-HHH--
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IY---SWI------------------I-IKC-- 543 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~---~~~------------------~-~~~-- 543 (632)
-+|.-++++||+||||||||||+++|.|+++|++ + .. ... + .++
T Consensus 21 ~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~ 100 (235)
T cd03261 21 LDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAF 100 (235)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCcHHHHHHH
Confidence 3555567999999999999999999999988743 1 00 000 0 000
Q ss_pred -----------------HHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 544 -----------------TNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 544 -----------------~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
.+.+..+ |+.........+||||||||++||||+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~ 178 (235)
T cd03261 101 PLREHTRLSEEEIREIVLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDL 178 (235)
T ss_pred HHhhccCCCHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH
Confidence 0111111 33333334456899999999999999554
Q ss_pred ------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhH
Q 047286 582 ------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYA 623 (632)
Q Consensus 582 ------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~ 623 (632)
++++|.++.+. .||+|++|++|++++.|++++++.. ...|.
T Consensus 179 l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~-~~~~~ 232 (235)
T cd03261 179 IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS-DDPLV 232 (235)
T ss_pred HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC-CChhh
Confidence 68899999876 5999999999999999999999875 55453
No 400
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=99.75 E-value=8.7e-18 Score=174.80 Aligned_cols=154 Identities=18% Similarity=0.155 Sum_probs=94.9
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHh---CCCCCcHHhhcceEEEcccCcccccccccccccccCC--CCC-CHHH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVES---FRFYAPEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGK--QNA-SDEH 159 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~---~~~~~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~--~~~-~~~~ 159 (632)
-++++..|..+++||+||+||||||++|.. -.+..+++.+..--...|+. ........+.+.-.. ... +.++
T Consensus 99 a~L~L~~GrRYGLvGrNG~GKsTLLRaia~~~v~~f~veqE~~g~~t~~~~~~--l~~D~~~~dfl~~e~~l~~~~~l~e 176 (582)
T KOG0062|consen 99 ANLTLSRGRRYGLVGRNGIGKSTLLRAIANGQVSGFHVEQEVRGDDTEALQSV--LESDTERLDFLAEEKELLAGLTLEE 176 (582)
T ss_pred CceeeecccccceeCCCCCcHHHHHHHHHhcCcCccCchhheeccchHHHhhh--hhccHHHHHHHHhhhhhhccchHHH
Confidence 677889999999999999999999999973 11222222222111111110 001100000000000 000 2233
Q ss_pred HHH-HHHHccchh-----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEecC
Q 047286 160 IRP-AVQLANAEK-----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVANC 216 (632)
Q Consensus 160 ~~~-~~~~~~l~~-----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~ 216 (632)
+.. ++.-.+..+ .+.+|++|.+.++ +|+.||..+..-+.+.|..+. .|+++|+||
T Consensus 177 i~~~~L~glGFt~emq~~pt~slSGGWrMrlaLARAlf~~pDlLLLDEPTNhLDv~av~WLe~yL~t~~--~T~liVSHD 254 (582)
T KOG0062|consen 177 IYDKILAGLGFTPEMQLQPTKSLSGGWRMRLALARALFAKPDLLLLDEPTNHLDVVAVAWLENYLQTWK--ITSLIVSHD 254 (582)
T ss_pred HHHHHHHhCCCCHHHHhccccccCcchhhHHHHHHHHhcCCCEEeecCCcccchhHHHHHHHHHHhhCC--ceEEEEecc
Confidence 333 555555443 4567889988777 399999999999988888864 899999999
Q ss_pred chHHhh-cCeEEEEeCCeEE-EecChhHH
Q 047286 217 LITIRN-ADCIIMVSKGKIV-EKGTHDEL 243 (632)
Q Consensus 217 ~~~~~~-aD~i~vl~~G~i~-~~g~~~el 243 (632)
-..+.. |..|+-+++-++- +.|++++.
T Consensus 255 r~FLn~V~tdIIH~~~~kL~~YkGN~~~F 283 (582)
T KOG0062|consen 255 RNFLNTVCTDIIHLENLKLDYYKGNYSQF 283 (582)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhcCcHHHH
Confidence 999976 8888888876552 33444443
No 401
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=99.75 E-value=3.4e-18 Score=180.79 Aligned_cols=120 Identities=22% Similarity=0.251 Sum_probs=87.6
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------c--------------------HHHHH--------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------I--------------------YSWII-------- 540 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~--------------------~~~~~-------- 540 (632)
+|.-+++++|+||||||||||+++|.|+++|++- . ...-+
T Consensus 36 ~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~ 115 (375)
T PRK09452 36 TINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQK 115 (375)
T ss_pred EEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcC
Confidence 3444558999999999999999999999988430 0 00000
Q ss_pred -------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------------
Q 047286 541 -------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------------- 581 (632)
Q Consensus 541 -------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------------- 581 (632)
..+.+.+..+ |++........+||||||||+|||||+..
T Consensus 116 ~~~~~~~~~~~~~l~~~--~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~ 193 (375)
T PRK09452 116 TPAAEITPRVMEALRMV--QLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRK 193 (375)
T ss_pred CCHHHHHHHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh
Confidence 0111222222 44444555667899999999999999654
Q ss_pred -----hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 -----CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 -----~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
|++||.+..+ ..||+|++|++|+|++.|+.++++.++...|
T Consensus 194 ~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~~~ 240 (375)
T PRK09452 194 LGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLF 240 (375)
T ss_pred cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 7889998875 5799999999999999999999998644333
No 402
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=99.75 E-value=4.1e-18 Score=193.80 Aligned_cols=158 Identities=25% Similarity=0.296 Sum_probs=122.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHh----hcceEEEcccCccccc-cccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAE----QEKIGLVSKEPIFLFC-DFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~----r~~i~~v~Q~~~~~~~-~~~~ 144 (632)
.+||++++||+++|+||||||||||+++|+|....+ ..+. ++.++|++|++.+|.. ++.+
T Consensus 26 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e 105 (648)
T PRK10535 26 GISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAAQ 105 (648)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHHHhccEEEEeCCcccCCCCCHHH
Confidence 499999999999999999999999999998653211 1111 4679999999976643 4444
Q ss_pred ccccccCC-----C-CCCHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHH
Q 047286 145 GQYIPYGK-----Q-NASDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIV 197 (632)
Q Consensus 145 ~~~i~~~~-----~-~~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i 197 (632)
|+.+.. . ....++..+.++.+++.+. ...||.|+.+++ +|++||+.+++.+
T Consensus 106 --nl~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~LS~Gq~qrv~LAraL~~~P~lLllDEP~~gLD~~s~~~l 183 (648)
T PRK10535 106 --NVEVPAVYAGLERKQRLLRAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEV 183 (648)
T ss_pred --HHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHH
Confidence 454321 1 1113345667777777654 456778887776 3899999999999
Q ss_pred HHHHHHHh-CCceEEEEecCchHHhhcCeEEEEeCCeEEEecChhHHh
Q 047286 198 QAAMVKLV-TNQTVVIVANCLITIRNADCIIMVSKGKIVEKGTHDELI 244 (632)
Q Consensus 198 ~~~l~~~~-~~~tviiitH~~~~~~~aD~i~vl~~G~i~~~g~~~el~ 244 (632)
.+.++++. +++|++++||+++.++.||++++|++|+++++|+.++..
T Consensus 184 ~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (648)
T PRK10535 184 MAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEKV 231 (648)
T ss_pred HHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCccccc
Confidence 99999885 478999999999988889999999999999999998875
No 403
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=99.75 E-value=6e-18 Score=181.84 Aligned_cols=161 Identities=18% Similarity=0.285 Sum_probs=114.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh--hcceEEEcccCcccccccccccccccCC--CCCCH---
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE--QEKIGLVSKEPIFLFCDFNEGQYIPYGK--QNASD--- 157 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~--r~~i~~v~Q~~~~~~~~~~~~~~i~~~~--~~~~~--- 157 (632)
.+||++++|++++|+||||||||||+++|.|+.......+ ...-.++.+.+.+ ...++..+|+.+.. ...+.
T Consensus 42 nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~~i~~~~~l-~~~lTV~EnL~l~~~~~~~~~~e~ 120 (549)
T PRK13545 42 NISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAALIAISSGL-NGQLTGIENIELKGLMMGLTKEKI 120 (549)
T ss_pred eeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEeeeEEecccc-CCCCcHHHHHHhhhhhcCCCHHHH
Confidence 3999999999999999999999999999996543221111 1111122333222 22222223554321 11222
Q ss_pred -HHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-CCceEEEEe
Q 047286 158 -EHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-TNQTVVIVA 214 (632)
Q Consensus 158 -~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~~tviiit 214 (632)
+++.++++.+++.+. +..||+|+.+++ +|++||+.+++.+.+.|+++. +++|+|++|
T Consensus 121 ~e~i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVS 200 (549)
T PRK13545 121 KEIIPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFIS 200 (549)
T ss_pred HHHHHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 234566777776544 567888988877 389999999999999999875 478999999
Q ss_pred cCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 215 NCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 215 H~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
|+++.+.. ||++++|++|++++.|+++++...
T Consensus 201 Hdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~ 233 (549)
T PRK13545 201 HSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDH 233 (549)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEECCHHHHHhh
Confidence 99998865 999999999999999999998654
No 404
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=99.75 E-value=2.5e-18 Score=169.20 Aligned_cols=116 Identities=22% Similarity=0.219 Sum_probs=81.4
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH----------------------------
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI---------------------------- 539 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~---------------------------- 539 (632)
-+|.-++.++|+||+|||||||+++|.|+..|.+ +....+
T Consensus 23 ~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~ 102 (258)
T COG1120 23 FSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRY 102 (258)
T ss_pred EEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCC
Confidence 3455556889999999999999999999988743 000000
Q ss_pred -------------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 540 -------------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 540 -------------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
...+.+.+..+ |+..-....-..||||||||+.||||+..
T Consensus 103 p~~~~~~~~~~~D~~~v~~aL~~~--~~~~la~r~~~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~l 180 (258)
T COG1120 103 PHLGLFGRPSKEDEEIVEEALELL--GLEHLADRPVDELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLEL 180 (258)
T ss_pred cccccccCCCHhHHHHHHHHHHHh--CcHHHhcCcccccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHH
Confidence 00011111111 22222222335799999999999999543
Q ss_pred ------------hccccchh-hhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ------------CGCGSPPY-HYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ------------~~iahrl~-~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++.|-+. ..+.||++++|++|+|+.+|+++|.+..
T Consensus 181 l~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 181 LRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 67889884 5689999999999999999999999874
No 405
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.4e-17 Score=157.53 Aligned_cols=159 Identities=19% Similarity=0.278 Sum_probs=118.8
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH------------------HhhcceEEEcccCccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE------------------AEQEKIGLVSKEPIFLFCDFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~------------------~~r~~i~~v~Q~~~~~~~~~~~~~ 146 (632)
.+|++|++||+.+|+||||||||||.+.|+|...|... +.|..+.+.+|.|.-+.+- +..+
T Consensus 22 gvnL~v~~GEvhaiMGPNGsGKSTLa~~i~G~p~Y~Vt~G~I~~~GedI~~l~~~ERAr~GifLafQ~P~ei~GV-~~~~ 100 (251)
T COG0396 22 GVNLTVKEGEVHAIMGPNGSGKSTLAYTIMGHPKYEVTEGEILFDGEDILELSPDERARAGIFLAFQYPVEIPGV-TNSD 100 (251)
T ss_pred CcceeEcCCcEEEEECCCCCCHHHHHHHHhCCCCceEecceEEECCcccccCCHhHHHhcCCEEeecCCccCCCe-eHHH
Confidence 39999999999999999999999999999876555322 2466788999999755442 1111
Q ss_pred cccc------CCCC---CCHHHHHHHHHHccchhhH-h-----hCCccccccc-----------------ccCCCCHHHH
Q 047286 147 YIPY------GKQN---ASDEHIRPAVQLANAEKSI-D-----KLPLGLDTVV-----------------ATNAVDAQSE 194 (632)
Q Consensus 147 ~i~~------~~~~---~~~~~~~~~~~~~~l~~~i-~-----~l~~g~~~~v-----------------~ts~LD~~~~ 194 (632)
.+.. +.+. ...+++++.++..++++.. + .+|+|...+. ..||||..+-
T Consensus 101 fLr~a~n~~~~~~~~~~~~~~~~~e~~~~l~~~~~~l~R~vN~GFSGGEkKR~EilQ~~~lePkl~ILDE~DSGLDIdal 180 (251)
T COG0396 101 FLRAAMNARRGARGILPEFIKELKEKAELLGLDEEFLERYVNEGFSGGEKKRNEILQLLLLEPKLAILDEPDSGLDIDAL 180 (251)
T ss_pred HHHHHHHhhhccccccHHHHHHHHHHHHHcCCCHHHhhcccCCCcCcchHHHHHHHHHHhcCCCEEEecCCCcCccHHHH
Confidence 1211 1111 1245667777777776632 2 3667765443 2799999999
Q ss_pred HHHHHHHHHHh-CCceEEEEecCchHHhh--cCeEEEEeCCeEEEecChhHHhc
Q 047286 195 RIVQAAMVKLV-TNQTVVIVANCLITIRN--ADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 195 ~~i~~~l~~~~-~~~tviiitH~~~~~~~--aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
+.+-+.+..++ ++.++++|||....+.+ .|++.+|-+|+|+..|.+ ++..
T Consensus 181 k~V~~~i~~lr~~~~~~liITHy~rll~~i~pD~vhvl~~GrIv~sG~~-el~~ 233 (251)
T COG0396 181 KIVAEGINALREEGRGVLIITHYQRLLDYIKPDKVHVLYDGRIVKSGDP-ELAE 233 (251)
T ss_pred HHHHHHHHHHhcCCCeEEEEecHHHHHhhcCCCEEEEEECCEEEecCCH-HHHH
Confidence 99999999986 47899999999998887 599999999999999998 6643
No 406
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=99.74 E-value=2.1e-17 Score=191.09 Aligned_cols=76 Identities=22% Similarity=0.352 Sum_probs=67.0
Q ss_pred hhhHhhCCccccccc-------------------ccCCCCHHHHHHHHHHHHHHhC-CceEEEEecCchHHhhcCeEEEE
Q 047286 170 EKSIDKLPLGLDTVV-------------------ATNAVDAQSERIVQAAMVKLVT-NQTVVIVANCLITIRNADCIIMV 229 (632)
Q Consensus 170 ~~~i~~l~~g~~~~v-------------------~ts~LD~~~~~~i~~~l~~~~~-~~tviiitH~~~~~~~aD~i~vl 229 (632)
+..+..||+|..+++ +|++||+...+.+.+.|+++++ |.|||+|+|+++.+..||+|++|
T Consensus 484 ~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~~G~TVIvVeH~~~~i~~aD~vi~L 563 (943)
T PRK00349 484 SRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRDLGNTLIVVEHDEDTIRAADYIVDI 563 (943)
T ss_pred CCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEe
Confidence 345778888887766 3899999999999999999864 78999999999999889999999
Q ss_pred ------eCCeEEEecChhHHhc
Q 047286 230 ------SKGKIVEKGTHDELIE 245 (632)
Q Consensus 230 ------~~G~i~~~g~~~el~~ 245 (632)
++|+|+.+|+++++..
T Consensus 564 gpgaG~~~G~iv~~g~~~e~~~ 585 (943)
T PRK00349 564 GPGAGVHGGEVVASGTPEEIMK 585 (943)
T ss_pred ccccCCCCCEEeeccCHHHHhc
Confidence 9999999999998754
No 407
>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=99.74 E-value=7.4e-18 Score=159.26 Aligned_cols=123 Identities=21% Similarity=0.249 Sum_probs=86.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCC----CC--CcHHhhcceEEEcccCcccccccccccccccCCCCCCHH
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFR----FY--APEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDE 158 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~----~~--~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~ 158 (632)
.+||++++|++++|+||||||||||++++.+.. .. .+...+..++|++|
T Consensus 13 ~isl~i~~G~~~~l~G~nG~GKSTLl~~il~~~G~v~~~~~~~~~~~~~~~~~~q------------------------- 67 (176)
T cd03238 13 NLDVSIPLNVLVVVTGVSGSGKSTLVNEGLYASGKARLISFLPKFSRNKLIFIDQ------------------------- 67 (176)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhhcCCcEEECCcccccccccEEEEhH-------------------------
Confidence 399999999999999999999999999985210 00 00001223445444
Q ss_pred HHHHHHHHccc-----hhhHhhCCccccccc-------------------ccCCCCHHHHHHHHHHHHHHh-CCceEEEE
Q 047286 159 HIRPAVQLANA-----EKSIDKLPLGLDTVV-------------------ATNAVDAQSERIVQAAMVKLV-TNQTVVIV 213 (632)
Q Consensus 159 ~~~~~~~~~~l-----~~~i~~l~~g~~~~v-------------------~ts~LD~~~~~~i~~~l~~~~-~~~tviii 213 (632)
.++++..++ +.....||.|+.+++ +|++||+.+++.+.+.++++. .++|+|++
T Consensus 68 --~~~l~~~~L~~~~~~~~~~~LSgGq~qrl~laral~~~~~p~llLlDEPt~~LD~~~~~~l~~~l~~~~~~g~tvIiv 145 (176)
T cd03238 68 --LQFLIDVGLGYLTLGQKLSTLSGGELQRVKLASELFSEPPGTLFILDEPSTGLHQQDINQLLEVIKGLIDLGNTVILI 145 (176)
T ss_pred --HHHHHHcCCCccccCCCcCcCCHHHHHHHHHHHHHhhCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 122232222 223344555544333 389999999999999999876 47899999
Q ss_pred ecCchHHhhcCeEEEEeCCeE
Q 047286 214 ANCLITIRNADCIIMVSKGKI 234 (632)
Q Consensus 214 tH~~~~~~~aD~i~vl~~G~i 234 (632)
||+++.+..||++++|++|+.
T Consensus 146 SH~~~~~~~~d~i~~l~~g~~ 166 (176)
T cd03238 146 EHNLDVLSSADWIIDFGPGSG 166 (176)
T ss_pred eCCHHHHHhCCEEEEECCCCC
Confidence 999998888999999977554
No 408
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=99.74 E-value=5e-18 Score=179.91 Aligned_cols=118 Identities=22% Similarity=0.186 Sum_probs=86.9
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHH--------------------HHH-------
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYS--------------------WII------- 540 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~--------------------~~~------- 540 (632)
-+|.-++++||+||||||||||+++|.|+++|++- ... ..+
T Consensus 24 l~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~ 103 (369)
T PRK11000 24 LDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA 103 (369)
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc
Confidence 34555568999999999999999999999887430 000 000
Q ss_pred --------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------------
Q 047286 541 --------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------------- 581 (632)
Q Consensus 541 --------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------------- 581 (632)
..+.+.+..+ |++........+||||||||++||||+..
T Consensus 104 ~~~~~~~~~~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~ 181 (369)
T PRK11000 104 GAKKEEINQRVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHK 181 (369)
T ss_pred CCCHHHHHHHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH
Confidence 0112223322 44444445567899999999999999554
Q ss_pred ------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCC
Q 047286 582 ------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITD 619 (632)
Q Consensus 582 ------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~ 619 (632)
+++||.++.+ ..||+|++|++|+|++.|+.+++..++.
T Consensus 182 ~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 182 RLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred HhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 7889999876 4699999999999999999999987543
No 409
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.74 E-value=2.1e-18 Score=154.94 Aligned_cols=107 Identities=24% Similarity=0.286 Sum_probs=84.7
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhhc------------HH------------------------------
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQVI------------YS------------------------------ 537 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~~------------~~------------------------------ 537 (632)
-.|.-++++|||||||||||||+.+|.|+-+|++-. ..
T Consensus 31 L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~ 110 (228)
T COG4181 31 LVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFHLIPNLTALENVA 110 (228)
T ss_pred EEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHhhccceeEEEEeeeccccchhhhhcc
Confidence 367777899999999999999999999998885410 00
Q ss_pred --HHH---------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 538 --WII---------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 538 --~~~---------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
.+. ..+.+..... |+..++.....+|||||.||+|||||+.-
T Consensus 111 lPleL~ge~~~~~~~~A~~lL~~v--GLg~Rl~HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDL 188 (228)
T COG4181 111 LPLELRGESSADSRAGAKALLEAV--GLGKRLTHYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADL 188 (228)
T ss_pred chhhhcCCccccHHHHHHHHHHHh--CcccccccCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHH
Confidence 000 1233444443 77778888889999999999999999422
Q ss_pred ------------hccccchhhhhcCCEEEEEeCCeEeee
Q 047286 582 ------------CGCGSPPYHYKNADITSVVKNGVIAEK 608 (632)
Q Consensus 582 ------------~~iahrl~~~~~aD~I~vl~~G~ive~ 608 (632)
+.+||.+..-..|||++-|.+|+|++.
T Consensus 189 lF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 189 LFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 899999999999999999999999873
No 410
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=99.74 E-value=2.2e-17 Score=166.33 Aligned_cols=178 Identities=20% Similarity=0.159 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCC-------C-------------C-C-----CcEEEEeeCCCEEEEEcCCCchH
Q 047286 53 SLNVNAFAAGQAAACKMFETIERIPKIN-------P-------------Y-D-----NRFLQHVPSGTTVALVGQSGSGK 106 (632)
Q Consensus 53 ~~~~~~~~~~~~a~~ri~~~~~~~~~~~-------~-------------~-~-----~~~~~~i~~Ge~~~ivG~sGsGK 106 (632)
...++.+.+|.+|+++|.++-..++.-. + + + .++|++|++||++.|+|.|||||
T Consensus 283 vgilP~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~~~~lelrnvrfay~~~~FhvgPiNl~ikrGelvFliG~NGsGK 362 (546)
T COG4615 283 VGILPTLLTAQVAFNKIAKLELAPYKADFPRPQAFPDWKTLELRNVRFAYQDNAFHVGPINLTIKRGELVFLIGGNGSGK 362 (546)
T ss_pred HhhhhHHHHHHHHHHHHHHhhcCCccccCCCCCcCCcccceeeeeeeeccCcccceecceeeEEecCcEEEEECCCCCcH
Confidence 3446778999999999988754332110 0 0 0 12999999999999999999999
Q ss_pred HHHHHHHHhCCCC---------------CcHHhhcceEEEcccCcccccccccccccccCCCCCCHHHHHHHHHHccchh
Q 047286 107 STVINLVESFRFY---------------APEAEQEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPAVQLANAEK 171 (632)
Q Consensus 107 STLl~ll~~~~~~---------------~~~~~r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~ 171 (632)
||+++++.|+-.+ .+++.|+-++-|+-|.++|...+... + .++.+.+.+.++...+..
T Consensus 363 ST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~~e-~------~as~q~i~~~LqrLel~~ 435 (546)
T COG4615 363 STLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLGPE-G------KASPQLIEKWLQRLELAH 435 (546)
T ss_pred HHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhCCc-c------CCChHHHHHHHHHHHHhh
Confidence 9999999855221 12335666777777777665444321 1 145555555555443322
Q ss_pred h---------HhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHH-h-CCceEEEEecCchHHhhc
Q 047286 172 S---------IDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKL-V-TNQTVVIVANCLITIRNA 223 (632)
Q Consensus 172 ~---------i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~-~-~~~tviiitH~~~~~~~a 223 (632)
. .-+|+.|++.+++ .+--||.-++.+.+.+... + .|||++.||||......|
T Consensus 436 ktsl~d~~fs~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~A 515 (546)
T COG4615 436 KTSLNDGRFSNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHA 515 (546)
T ss_pred hhcccCCcccccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhH
Confidence 1 3467888887775 3557999999998877654 3 489999999999999999
Q ss_pred CeEEEEeCCeEEEe
Q 047286 224 DCIIMVSKGKIVEK 237 (632)
Q Consensus 224 D~i~vl~~G~i~~~ 237 (632)
||++.|++|++++.
T Consensus 516 Drll~~~~G~~~e~ 529 (546)
T COG4615 516 DRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHHHhcCceeec
Confidence 99999999999875
No 411
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.74 E-value=9.3e-18 Score=170.92 Aligned_cols=125 Identities=19% Similarity=0.268 Sum_probs=90.0
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cHHH-------H-------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IYSW-------I------------------- 539 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~~~-------~------------------- 539 (632)
+.-+|+-++++||+||+|||||||+++|.|++.|++ + .... .
T Consensus 43 is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~ 122 (269)
T cd03294 43 VSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLEN 122 (269)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCCcHHHH
Confidence 344566667999999999999999999999987743 0 0000 0
Q ss_pred HH---------------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 540 II---------------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 540 ~~---------------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
+. .+.+.+..+ |++........+||||||||++||||+..
T Consensus 123 l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~ 200 (269)
T cd03294 123 VAFGLEVQGVPRAEREERAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQ 200 (269)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHH
Confidence 00 011222222 34333445557899999999999999554
Q ss_pred --------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchhHH
Q 047286 582 --------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTYAS 624 (632)
Q Consensus 582 --------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~ 624 (632)
+++||+++.+ +.||+|++|++|++++.|+++++++.+...|.+
T Consensus 201 ~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~~ 258 (269)
T cd03294 201 DELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYVR 258 (269)
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcHHHH
Confidence 6889999887 469999999999999999999998754555544
No 412
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=99.74 E-value=3.9e-18 Score=188.88 Aligned_cols=151 Identities=18% Similarity=0.243 Sum_probs=113.1
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------------Cc----HHhhcceEEEcccCccccc---ccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------------AP----EAEQEKIGLVSKEPIFLFC---DFNEG 145 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------------~~----~~~r~~i~~v~Q~~~~~~~---~~~~~ 145 (632)
+||++++||+++|+||||||||||+++|+|.... .. ...+++++|++|++.++.. +..+
T Consensus 279 vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~- 357 (490)
T PRK10938 279 LSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRN- 357 (490)
T ss_pred ceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHH-
Confidence 8999999999999999999999999999975321 00 1235679999998754332 2222
Q ss_pred cccccC------C-CCC---CHHHHHHHHHHccchh-----hHhhCCcccccccc-----------------cCCCCHHH
Q 047286 146 QYIPYG------K-QNA---SDEHIRPAVQLANAEK-----SIDKLPLGLDTVVA-----------------TNAVDAQS 193 (632)
Q Consensus 146 ~~i~~~------~-~~~---~~~~~~~~~~~~~l~~-----~i~~l~~g~~~~v~-----------------ts~LD~~~ 193 (632)
++.++ . ... ..+++.++++.+++.+ .+.+||+|++++++ |++||+.+
T Consensus 358 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~ 436 (490)
T PRK10938 358 -VILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLN 436 (490)
T ss_pred -HHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHH
Confidence 22111 0 001 1245677888877654 46789999998883 99999999
Q ss_pred HHHHHHHHHHHhC-C-ceEEEEecCchHHh--hcCeEEEEeCCeEEEec
Q 047286 194 ERIVQAAMVKLVT-N-QTVVIVANCLITIR--NADCIIMVSKGKIVEKG 238 (632)
Q Consensus 194 ~~~i~~~l~~~~~-~-~tviiitH~~~~~~--~aD~i~vl~~G~i~~~g 238 (632)
++.+.+.|+++.+ + .|+|++||+++.+. .||++++|++|+|++.-
T Consensus 437 ~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 437 RQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 9999999999854 4 46999999999885 38999999999998754
No 413
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=99.74 E-value=6.4e-18 Score=178.97 Aligned_cols=119 Identities=21% Similarity=0.270 Sum_probs=86.7
Q ss_pred EEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------c--------------------HHHHH---------
Q 047286 502 IVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------I--------------------YSWII--------- 540 (632)
Q Consensus 502 I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~--------------------~~~~~--------- 540 (632)
|.-+++++|+||||||||||+++|.|+++|++- . ...-+
T Consensus 42 i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~ 121 (377)
T PRK11607 42 IYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKL 121 (377)
T ss_pred EcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCC
Confidence 333458999999999999999999999887530 0 00000
Q ss_pred ------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------------------
Q 047286 541 ------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------------------- 581 (632)
Q Consensus 541 ------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------------------- 581 (632)
..+.+.+..+ |++........+||||||||+|||||+..
T Consensus 122 ~~~~~~~~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~ 199 (377)
T PRK11607 122 PKAEIASRVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV 199 (377)
T ss_pred CHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc
Confidence 0112222222 34333444567899999999999999544
Q ss_pred ----hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 ----CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 ----~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
+.+||.++.+ .-||+|++|++|+|++.|+.+|+..++...|
T Consensus 200 g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~ 245 (377)
T PRK11607 200 GVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRY 245 (377)
T ss_pred CCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHH
Confidence 7889999875 6799999999999999999999998644333
No 414
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=99.74 E-value=6.6e-18 Score=168.92 Aligned_cols=118 Identities=20% Similarity=0.205 Sum_probs=88.0
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHH-H----------------------H--
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSW-I----------------------I-- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~-~----------------------~-- 540 (632)
..-+|+-++++||+||+|||||||+++|.|++.|++. .... . +
T Consensus 19 vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~ 98 (236)
T cd03219 19 VSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVLENVMV 98 (236)
T ss_pred ceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHHHHHHH
Confidence 3335556679999999999999999999999876330 0000 0 0
Q ss_pred -----------------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------
Q 047286 541 -----------------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------- 581 (632)
Q Consensus 541 -----------------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------- 581 (632)
..+.+++..+ |++........+||||||||++||||+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~ 176 (236)
T cd03219 99 AAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNP 176 (236)
T ss_pred HHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCH
Confidence 0112233333 45555566677899999999999999654
Q ss_pred --------------------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 --------------------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 --------------------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||+++.+.. ||+|++|++|+|++.|+++++++.
T Consensus 177 ~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 177 EETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 678999999855 999999999999999999999764
No 415
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=99.74 E-value=9.6e-18 Score=188.10 Aligned_cols=158 Identities=20% Similarity=0.232 Sum_probs=116.1
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH--h--hcceEEEcccCcccccccccccccccCCC----CCCH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA--E--QEKIGLVSKEPIFLFCDFNEGQYIPYGKQ----NASD 157 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~--~--r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~----~~~~ 157 (632)
+||+|++||+++|+||||||||||+++|+|........ + ...+||++|++..++...+..+|+.++.. ....
T Consensus 343 isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 422 (556)
T PRK11819 343 LSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGETVKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNRE 422 (556)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCceEEEEEeCchhhcCCCCCHHHHHHhhcccccccccH
Confidence 99999999999999999999999999999653322111 1 12599999996223333333335544321 1123
Q ss_pred HHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEec
Q 047286 158 EHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVAN 215 (632)
Q Consensus 158 ~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH 215 (632)
.+.+.+++..++. ..+..||+|+.+++ +|++||+.+++.+.+.|.++. .|+|++||
T Consensus 423 ~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vtH 500 (556)
T PRK11819 423 IPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--GCAVVISH 500 (556)
T ss_pred HHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--CeEEEEEC
Confidence 3455677777663 34678999999887 399999999999999999873 48999999
Q ss_pred CchHHhh-cCeEEEEeC-CeEE-EecChhHHhc
Q 047286 216 CLITIRN-ADCIIMVSK-GKIV-EKGTHDELIE 245 (632)
Q Consensus 216 ~~~~~~~-aD~i~vl~~-G~i~-~~g~~~el~~ 245 (632)
+++.+.. ||+|++|++ |++. ..|+++++.+
T Consensus 501 d~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~ 533 (556)
T PRK11819 501 DRWFLDRIATHILAFEGDSQVEWFEGNFQEYEE 533 (556)
T ss_pred CHHHHHHhCCEEEEEECCCeEEEecCCHHHHHH
Confidence 9998865 999999986 7876 4677776543
No 416
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.74 E-value=6.5e-18 Score=164.98 Aligned_cols=143 Identities=13% Similarity=0.210 Sum_probs=108.5
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|+|..... ....+++++|++|++.++. .++.+ |+.
T Consensus 19 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~e--~l~ 96 (204)
T PRK13538 19 GLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTELTALE--NLR 96 (204)
T ss_pred cceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeCCccccCcCCcHHH--HHH
Confidence 399999999999999999999999999998653211 1124567999999986543 24444 554
Q ss_pred cCCC---CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh
Q 047286 150 YGKQ---NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV 205 (632)
Q Consensus 150 ~~~~---~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~ 205 (632)
+... ....+++.++++..++.+ .+..||.|..+++ +|++||+.+++.+.+.|+++.
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~ 176 (204)
T PRK13538 97 FYQRLHGPGDDEALWEALAQVGLAGFEDVPVRQLSAGQQRRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHA 176 (204)
T ss_pred HHHHhcCccHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH
Confidence 4321 123456778888887754 4567888988777 399999999999999999875
Q ss_pred -CCceEEEEecCchHHhh-cCeEEEE
Q 047286 206 -TNQTVVIVANCLITIRN-ADCIIMV 229 (632)
Q Consensus 206 -~~~tviiitH~~~~~~~-aD~i~vl 229 (632)
++.|+|++||++..+.. .+|++.+
T Consensus 177 ~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 177 EQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred HCCCEEEEEecChhhhccCCceEEec
Confidence 47899999999999966 5577666
No 417
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=99.74 E-value=9.2e-18 Score=177.12 Aligned_cols=122 Identities=18% Similarity=0.231 Sum_probs=89.2
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh-----------c-----HHHH-----------------------HH
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQV-----------I-----YSWI-----------------------II 541 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~-----------~-----~~~~-----------------------~~ 541 (632)
+|.-+++++|+|+||||||||+++|.|+++|++. . ...+ ..
T Consensus 46 ~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~e 125 (382)
T TIGR03415 46 DIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEE 125 (382)
T ss_pred EEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHH
Confidence 4555568999999999999999999999987430 0 0000 00
Q ss_pred ------------------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 542 ------------------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 542 ------------------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
.+.+++..+ |++........+||||||||++||||+..
T Consensus 126 Ni~~~~~~~g~~~~~~~~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l 203 (382)
T TIGR03415 126 NVAFGLEMQGMPEAERRKRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQL 203 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHH
Confidence 111222222 44433445566899999999999999544
Q ss_pred ---------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchhHH
Q 047286 582 ---------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTYAS 624 (632)
Q Consensus 582 ---------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~ 624 (632)
+++||.++.+ +.||+|++|++|+|++.|+++|++.++...|.+
T Consensus 204 ~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 262 (382)
T TIGR03415 204 QDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVA 262 (382)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHH
Confidence 7889999986 679999999999999999999999764455543
No 418
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=99.74 E-value=8.5e-18 Score=176.79 Aligned_cols=120 Identities=26% Similarity=0.291 Sum_probs=86.5
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHH-----------------H---H--------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSW-----------------I---I-------- 540 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~-----------------~---~-------- 540 (632)
+|.-++++||+||||||||||+++|.|+++|++- .... . +
T Consensus 24 ~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~ 103 (353)
T PRK10851 24 DIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLP 103 (353)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcc
Confidence 4445569999999999999999999999887430 0000 0 0
Q ss_pred -----------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------------
Q 047286 541 -----------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------------- 581 (632)
Q Consensus 541 -----------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------------- 581 (632)
..+.+.+..+ |++.........||||||||++||||+..
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~ 181 (353)
T PRK10851 104 RRERPNAAAIKAKVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQ 181 (353)
T ss_pred cccCCCHHHHHHHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHH
Confidence 0111122222 33333344567899999999999999654
Q ss_pred ---------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 ---------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 ---------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
+++||.+..+ +.||+|++|++|+|++.|++++++.++...|
T Consensus 182 l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~~~~ 232 (353)
T PRK10851 182 LHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPATRF 232 (353)
T ss_pred HHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccchH
Confidence 7889999875 5699999999999999999999997643333
No 419
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.74 E-value=3.3e-18 Score=165.02 Aligned_cols=158 Identities=22% Similarity=0.377 Sum_probs=111.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC----------cH----HhhcceEEEccc-Ccccc-----ccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA----------PE----AEQEKIGLVSKE-PIFLF-----CDFNE 144 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~----------~~----~~r~~i~~v~Q~-~~~~~-----~~~~~ 144 (632)
++||+|++|++++++|||||||||++|+|.|+.... |- +.-+++++|.-+ ..+.. .++..
T Consensus 42 disf~IP~G~ivgflGaNGAGKSTtLKmLTGll~p~~G~v~V~G~~Pf~~~~~~~~~~~~v~gqk~ql~Wdlp~~ds~~v 121 (325)
T COG4586 42 DISFEIPKGEIVGFLGANGAGKSTTLKMLTGLLLPTSGKVRVNGKDPFRRREEYLRSIGLVMGQKLQLWWDLPALDSLEV 121 (325)
T ss_pred eeeeecCCCcEEEEEcCCCCcchhhHHHHhCccccCCCeEEecCcCcchhHHHHHHHHHHHhhhhheeeeechhhhhHHH
Confidence 499999999999999999999999999998763322 21 122345555321 11111 11111
Q ss_pred ccccccCCCCCCH----HHHHHHHHHccch----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHH
Q 047286 145 GQYIPYGKQNASD----EHIRPAVQLANAE----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQA 199 (632)
Q Consensus 145 ~~~i~~~~~~~~~----~~~~~~~~~~~l~----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~ 199 (632)
+..| + +..+ ++.....+..+++ ..+.+||.|.+.+. +|-+||...+..+.+
T Consensus 122 ~~~I-y---~Ipd~~F~~r~~~l~eiLdl~~~lk~~vr~LSlGqRmraeLaaaLLh~p~VLfLDEpTvgLDV~aq~~ir~ 197 (325)
T COG4586 122 LKLI-Y---EIPDDEFAERLDFLTEILDLEGFLKWPVRKLSLGQRMRAELAAALLHPPKVLFLDEPTVGLDVNAQANIRE 197 (325)
T ss_pred HHHH-H---hCCHHHHHHHHHHHHHHhcchhhhhhhhhhccchHHHHHHHHHHhcCCCcEEEecCCccCcchhHHHHHHH
Confidence 1100 1 1222 2333344444444 45678999987655 389999999999999
Q ss_pred HHHHHhC--CceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcC
Q 047286 200 AMVKLVT--NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIED 246 (632)
Q Consensus 200 ~l~~~~~--~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~ 246 (632)
.+++..+ +.||+++||++..+.. ||||+.|++|+++.+|+.+++...
T Consensus 198 Flke~n~~~~aTVllTTH~~~di~~lc~rv~~I~~Gqlv~dg~l~~l~~~ 247 (325)
T COG4586 198 FLKEYNEERQATVLLTTHIFDDIATLCDRVLLIDQGQLVFDGTLAQLQEQ 247 (325)
T ss_pred HHHHHHHhhCceEEEEecchhhHHHhhhheEEeeCCcEeecccHHHHHHH
Confidence 9999853 6899999999988865 999999999999999999998654
No 420
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=99.74 E-value=4.4e-16 Score=157.00 Aligned_cols=258 Identities=20% Similarity=0.167 Sum_probs=155.3
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------
Q 047286 348 IGAVGARLSTDASAVRSVVGDALGLIIQNIATIAAGLVIAFTA-WKLAFITLAVPSLTIAEGYLKKKKNYERL------- 419 (632)
Q Consensus 348 ~G~l~srls~D~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~l~lv~l~~~~l~~~~~~~~~~~~~~~~------- 419 (632)
.++++.++++|+..+. +-...++.+++....++++.+...+. +++.+++++.+.+.+...++...+.+++.
T Consensus 104 ~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~e 182 (546)
T COG4615 104 SARLLAGLTSDVRNIS-FAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETE 182 (546)
T ss_pred ccchhhhhccccccee-ehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 3899999999999998 55567788888888888877766654 77666665554444443332221100000
Q ss_pred --------------------------------------------HHHHH------------HHhhhhH--Hhh-cCCcCH
Q 047286 420 --------------------------------------------HINAF------------CFFIGSK--LVE-HGDATF 440 (632)
Q Consensus 420 --------------------------------------------~~~~~------------~~~~g~~--~v~-~g~~s~ 440 (632)
..+.+ .-.+|.. +.. .+-.+.
T Consensus 183 d~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w~st 262 (546)
T COG4615 183 DKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGWAST 262 (546)
T ss_pred HHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 00000 0011111 100 111111
Q ss_pred HH--HHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCccc-------------------
Q 047286 441 GE--VFKFLSEFGCFWCLESTAVAPNADKAKGSAASIFEILESKPKIDWSSKDGMTPSTVR------------------- 499 (632)
Q Consensus 441 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~------------------- 499 (632)
.. .++....+..-++.+.....|.+..+.++.++|.++-..|+..+.+.+.. .+.++
T Consensus 263 ~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~~q~--~p~~~~lelrnvrfay~~~~Fhvg 340 (546)
T COG4615 263 NVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPRPQA--FPDWKTLELRNVRFAYQDNAFHVG 340 (546)
T ss_pred hHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCCCCc--CCcccceeeeeeeeccCcccceec
Confidence 11 11111222223466777888899999999999998865544333221111 11121
Q ss_pred ---ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhhc--------------H-HHH----------------------
Q 047286 500 ---GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQVI--------------Y-SWI---------------------- 539 (632)
Q Consensus 500 ---g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~~--------------~-~~~---------------------- 539 (632)
-+|.-++.|=|+|.+||||||+++||.|+|.|++.. . ..+
T Consensus 341 PiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~~e~~as 420 (546)
T COG4615 341 PINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLGPEGKAS 420 (546)
T ss_pred ceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhCCccCCC
Confidence 123333468899999999999999999999996400 0 000
Q ss_pred HHHHHHHHhcCCCccCcccccCC---CCCChHHHHHHHHHHHHhh-----------------------------------
Q 047286 540 IIKCTNFIASLPQGSDLNVGERG---LQLSGGLKQRIARTRARNY----------------------------------- 581 (632)
Q Consensus 540 ~~~~~~~i~~lp~g~dt~vge~G---~~LSgGQrQRiaiARA~~~----------------------------------- 581 (632)
...+..+...|.-.-.|.+-.+- ..||.|||.|+|+-=|++-
T Consensus 421 ~q~i~~~LqrLel~~ktsl~d~~fs~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGK 500 (546)
T COG4615 421 PQLIEKWLQRLELAHKTSLNDGRFSNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGK 500 (546)
T ss_pred hHHHHHHHHHHHHhhhhcccCCcccccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCC
Confidence 01233444444433344443332 4699999999999888443
Q ss_pred --hccccchhhhhcCCEEEEEeCCeEeee
Q 047286 582 --CGCGSPPYHYKNADITSVVKNGVIAEK 608 (632)
Q Consensus 582 --~~iahrl~~~~~aD~I~vl~~G~ive~ 608 (632)
+.|||.-.-...|||++-+++|+++|.
T Consensus 501 TI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 501 TIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred eEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 789999999999999999999999995
No 421
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.73 E-value=8.9e-18 Score=167.62 Aligned_cols=118 Identities=22% Similarity=0.270 Sum_probs=87.6
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc---HH-----HH-----------------HH--
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI---YS-----WI-----------------II-- 541 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---~~-----~~-----------------~~-- 541 (632)
+.-+|.-++.+||+||+|||||||+++|.|+++|++ +. .. .. ..
T Consensus 24 ~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l 103 (233)
T cd03258 24 VSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRTVFENV 103 (233)
T ss_pred ceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCcHHHHH
Confidence 334556667999999999999999999999988743 00 00 00 00
Q ss_pred ----------------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 542 ----------------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 542 ----------------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
.+.+.+..+ |++........+||||||||++||||++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~ 181 (233)
T cd03258 104 ALPLEIAGVPKAEIEERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILA 181 (233)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHH
Confidence 111223332 44444555667899999999999999554
Q ss_pred -------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 182 ~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (233)
T cd03258 182 LLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFAN 231 (233)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC
Confidence 68899999986 5999999999999999999998764
No 422
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=99.73 E-value=1.2e-17 Score=192.79 Aligned_cols=75 Identities=23% Similarity=0.364 Sum_probs=66.0
Q ss_pred hhHhhCCccccccc-------------------ccCCCCHHHHHHHHHHHHHHh-CCceEEEEecCchHHhhcCeEEEE-
Q 047286 171 KSIDKLPLGLDTVV-------------------ATNAVDAQSERIVQAAMVKLV-TNQTVVIVANCLITIRNADCIIMV- 229 (632)
Q Consensus 171 ~~i~~l~~g~~~~v-------------------~ts~LD~~~~~~i~~~l~~~~-~~~tviiitH~~~~~~~aD~i~vl- 229 (632)
+.+.+||+|+.+++ +|++||+...+.+.+.|+++. +|.|||+|+|+++.+..||+|++|
T Consensus 483 r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeHd~~~i~~aD~vi~Lg 562 (924)
T TIGR00630 483 RAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEHDEETIRAADYVIDIG 562 (924)
T ss_pred CCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHhhCCEEEEec
Confidence 45677888887766 289999999999999999985 478999999999999899999999
Q ss_pred -----eCCeEEEecChhHHhc
Q 047286 230 -----SKGKIVEKGTHDELIE 245 (632)
Q Consensus 230 -----~~G~i~~~g~~~el~~ 245 (632)
++|+|+..|+++++..
T Consensus 563 pgaG~~~G~Iv~~g~~~el~~ 583 (924)
T TIGR00630 563 PGAGIHGGEVVASGTPEEILA 583 (924)
T ss_pred ccccCCCCEEeeccCHHHHhc
Confidence 8999999999988753
No 423
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=99.73 E-value=7.2e-18 Score=174.62 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=86.4
Q ss_pred cccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------c--HHH-H---------------------H-----
Q 047286 499 RGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------I--YSW-I---------------------I----- 540 (632)
Q Consensus 499 ~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~--~~~-~---------------------~----- 540 (632)
.-+|.-++++||+||+|||||||+++|.|++.|++. . ... . +
T Consensus 13 s~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~ 92 (302)
T TIGR01188 13 NFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRENLEMMGR 92 (302)
T ss_pred eEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHHHHHHHH
Confidence 335555678999999999999999999999887530 0 000 0 0
Q ss_pred ----------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------------
Q 047286 541 ----------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------------- 581 (632)
Q Consensus 541 ----------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------------- 581 (632)
..+.+.+..+ |++........+||||||||++||||++.
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~ 170 (302)
T TIGR01188 93 LYGLPKDEAEERAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRAL 170 (302)
T ss_pred HcCCCHHHHHHHHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHH
Confidence 0122233332 33333344556899999999999999654
Q ss_pred -------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.++.+. .||+|++|++|+|++.|+++++.++
T Consensus 171 ~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 171 KEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 68899999886 5999999999999999999999764
No 424
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=99.73 E-value=1.2e-17 Score=187.27 Aligned_cols=156 Identities=20% Similarity=0.240 Sum_probs=114.6
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh----hcceEEEcccCcccccccccccccccCCC----CCCH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE----QEKIGLVSKEPIFLFCDFNEGQYIPYGKQ----NASD 157 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~----r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~----~~~~ 157 (632)
+||+|++|++++|+||||||||||+++|.|........+ ...++|++|++..++...+..+|+.++.. ....
T Consensus 341 isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 420 (552)
T TIGR03719 341 LSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGETVKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKRE 420 (552)
T ss_pred ceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECCceEEEEEeCCccccCCCCcHHHHHHhhccccccCcch
Confidence 999999999999999999999999999986532221111 12599999996323333333335554321 1113
Q ss_pred HHHHHHHHHccch-----hhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEec
Q 047286 158 EHIRPAVQLANAE-----KSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVAN 215 (632)
Q Consensus 158 ~~~~~~~~~~~l~-----~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH 215 (632)
.+.+++++..++. ..+.+||+|+++++ +|++||+.+++.+.+.|+++. .|+|++||
T Consensus 421 ~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~viivsH 498 (552)
T TIGR03719 421 VPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA--GCAVVISH 498 (552)
T ss_pred HHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC--CeEEEEeC
Confidence 3455677777763 34678999999888 399999999999999999873 48999999
Q ss_pred CchHHhh-cCeEEEEeC-CeEE-EecChhHH
Q 047286 216 CLITIRN-ADCIIMVSK-GKIV-EKGTHDEL 243 (632)
Q Consensus 216 ~~~~~~~-aD~i~vl~~-G~i~-~~g~~~el 243 (632)
+++.+.. ||+|++|++ |++. ..|+.++.
T Consensus 499 d~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~ 529 (552)
T TIGR03719 499 DRWFLDRIATHILAFEGDSHVEWFEGNYSEY 529 (552)
T ss_pred CHHHHHHhCCEEEEEECCCeEEEeCCCHHHH
Confidence 9998865 999999997 5876 45666554
No 425
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=99.73 E-value=6.8e-18 Score=166.95 Aligned_cols=116 Identities=18% Similarity=0.201 Sum_probs=84.3
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------cH--HHH----------------------H---
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------IY--SWI----------------------I--- 540 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~~--~~~----------------------~--- 540 (632)
++.-+|+-++.+||+||+|||||||+++|.|+++|++. .. ... +
T Consensus 20 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~ 99 (220)
T cd03263 20 DLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTVREHLRFY 99 (220)
T ss_pred ceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCHHHHHHHH
Confidence 33445666679999999999999999999999887430 00 000 0
Q ss_pred ------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------------
Q 047286 541 ------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------------- 581 (632)
Q Consensus 541 ------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------------- 581 (632)
..+.+++..+ |++........+||||||||++||||+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~ 177 (220)
T cd03263 100 ARLKGLPKSEIKEEVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLIL 177 (220)
T ss_pred HHHcCCCHHHHHHHHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHH
Confidence 0122333322 33333334456899999999999999554
Q ss_pred --------hccccchhhhh-cCCEEEEEeCCeEeeecChHHH
Q 047286 582 --------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDAL 614 (632)
Q Consensus 582 --------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL 614 (632)
+++||++..+. .||+|++|++|++++.|+++++
T Consensus 178 ~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 178 EVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 68899999885 5999999999999999999886
No 426
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=99.73 E-value=8.2e-18 Score=186.25 Aligned_cols=156 Identities=15% Similarity=0.219 Sum_probs=113.4
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------c-HHhhcceEEEcccCc---ccc-cccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------P-EAEQEKIGLVSKEPI---FLF-CDFNEG 145 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~-~~~r~~i~~v~Q~~~---~~~-~~~~~~ 145 (632)
+||++++||+++|+||||||||||+++|.|+.... + ...++.++|++|++. +|. .++.++
T Consensus 267 vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 346 (491)
T PRK10982 267 VSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFN 346 (491)
T ss_pred eeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHh
Confidence 89999999999999999999999999998653211 0 012456999999853 222 122111
Q ss_pred ---cccccCCC-----C--CCHHHHHHHHHHccc-----hhhHhhCCccccccc-----------------ccCCCCHHH
Q 047286 146 ---QYIPYGKQ-----N--ASDEHIRPAVQLANA-----EKSIDKLPLGLDTVV-----------------ATNAVDAQS 193 (632)
Q Consensus 146 ---~~i~~~~~-----~--~~~~~~~~~~~~~~l-----~~~i~~l~~g~~~~v-----------------~ts~LD~~~ 193 (632)
+++.+... . ...+++.+.++..++ +..+.+||+|+++++ +|++||+.+
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~ 426 (491)
T PRK10982 347 SLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGA 426 (491)
T ss_pred eehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhH
Confidence 11211100 0 112344556666554 345788999999888 399999999
Q ss_pred HHHHHHHHHHHh-CCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChh
Q 047286 194 ERIVQAAMVKLV-TNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHD 241 (632)
Q Consensus 194 ~~~i~~~l~~~~-~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~ 241 (632)
++.+++.|.++. +++|+|++||+++.+.. ||++++|++|+++..++.+
T Consensus 427 ~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~ 476 (491)
T PRK10982 427 KFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTK 476 (491)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccc
Confidence 999999998875 57899999999998865 9999999999999877654
No 427
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.73 E-value=2.6e-18 Score=163.06 Aligned_cols=118 Identities=25% Similarity=0.206 Sum_probs=82.2
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHHH-------------------------
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSWI------------------------- 539 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~~------------------------- 539 (632)
+++-+|.-++.|||+||||||||||++.|.|+.+|++. .-..+
T Consensus 22 ~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~N 101 (258)
T COG3638 22 DVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLVPRLSVLEN 101 (258)
T ss_pred eEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHhceeEeccCCcccccHHHHH
Confidence 34446666779999999999999999999999998540 00000
Q ss_pred -----------------------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------
Q 047286 540 -----------------------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------- 581 (632)
Q Consensus 540 -----------------------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------- 581 (632)
...+.+-...+ |+--..-.+-.+|||||.||++||||+..
T Consensus 102 Vl~grl~~~s~~~slfglfsk~dk~~Al~aLerv--gi~~~A~qra~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLD 179 (258)
T COG3638 102 VLLGRLGYTSTWRSLFGLFSKEDKAQALDALERV--GILDKAYQRASTLSGGQQQRVAIARALVQQPKIILADEPVASLD 179 (258)
T ss_pred HHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHc--CcHHHHHHHhccCCcchhHHHHHHHHHhcCCCEEecCCcccccC
Confidence 00111111111 22223335678999999999999999654
Q ss_pred ----------------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhc
Q 047286 582 ----------------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMK 616 (632)
Q Consensus 582 ----------------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~ 616 (632)
++.-|-.... +.||||+=|++|+||-.|+.+||-.
T Consensus 180 p~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 180 PESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred hhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhhH
Confidence 3335555555 4799999999999999999999653
No 428
>PLN03073 ABC transporter F family; Provisional
Probab=99.73 E-value=1.2e-17 Score=190.25 Aligned_cols=155 Identities=19% Similarity=0.257 Sum_probs=116.4
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH----hhcceEEEcccCccccccccccccccc--CCCCCCHHH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA----EQEKIGLVSKEPIFLFCDFNEGQYIPY--GKQNASDEH 159 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~----~r~~i~~v~Q~~~~~~~~~~~~~~i~~--~~~~~~~~~ 159 (632)
+||+|++|++++|+||||||||||+++|.|+....... .+.+++|++|++. ...++..+....+ .......++
T Consensus 528 vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~~~~igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~ 606 (718)
T PLN03073 528 LNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSAKVRMAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQK 606 (718)
T ss_pred cEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECCceeEEEEecccc-ccCCcchhHHHHHHHhcCCCCHHH
Confidence 89999999999999999999999999999654322211 1346999999863 1222322211111 112234677
Q ss_pred HHHHHHHccchh-----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHhCCceEEEEecCc
Q 047286 160 IRPAVQLANAEK-----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLVTNQTVVIVANCL 217 (632)
Q Consensus 160 ~~~~~~~~~l~~-----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~ 217 (632)
++++++..++.. .+..||+|++++++ |++||+.+.+.+.+.+.+. +.|+|++||++
T Consensus 607 i~~~L~~~gl~~~~~~~~~~~LSgGqkqRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~ 684 (718)
T PLN03073 607 LRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDE 684 (718)
T ss_pred HHHHHHHCCCChHHhcCCccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCH
Confidence 888888887752 35779999988883 9999999999999888775 35999999999
Q ss_pred hHHhh-cCeEEEEeCCeEE-EecChhHH
Q 047286 218 ITIRN-ADCIIMVSKGKIV-EKGTHDEL 243 (632)
Q Consensus 218 ~~~~~-aD~i~vl~~G~i~-~~g~~~el 243 (632)
..+.. ||++++|++|+++ ..|++++.
T Consensus 685 ~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 685 HLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 98875 9999999999998 67777654
No 429
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.73 E-value=1.2e-17 Score=167.59 Aligned_cols=118 Identities=25% Similarity=0.323 Sum_probs=87.4
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHHH----------------------H---
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSWI----------------------I--- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~~----------------------~--- 540 (632)
++-+|.-++++||+||||||||||+++|.|+++|++. ..... +
T Consensus 20 is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~ 99 (242)
T cd03295 20 LNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEENIALV 99 (242)
T ss_pred eEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHHHHHHH
Confidence 3345556679999999999999999999999877430 00000 0
Q ss_pred ------------HHHHHHHhcCCCccCc--ccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 541 ------------IKCTNFIASLPQGSDL--NVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 541 ------------~~~~~~i~~lp~g~dt--~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
..+.+.+..+ |+.. .......+||||||||++||||++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~ 177 (242)
T cd03295 100 PKLLKWPKEKIRERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEE 177 (242)
T ss_pred HHHcCCCHHHHHHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH
Confidence 0122333333 4443 4456678999999999999999554
Q ss_pred ------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||+++.+ +.||+|++|++|++++.|++++++++
T Consensus 178 L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 178 FKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 7889999976 56999999999999999999999764
No 430
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.73 E-value=1.3e-17 Score=169.53 Aligned_cols=127 Identities=25% Similarity=0.248 Sum_probs=92.3
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc---HHH---H-----------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI---YSW---I----------------------- 539 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---~~~---~----------------------- 539 (632)
+.-+|.-++.+||+||||||||||+++|.|+++|++ +. ... .
T Consensus 30 isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~ 109 (265)
T TIGR02769 30 VSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQ 109 (265)
T ss_pred ceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCCCCCHHH
Confidence 334566667999999999999999999999987743 00 000 0
Q ss_pred -H----------------HHHHHHHhcCCCccC-cccccCCCCCChHHHHHHHHHHHHhh--------------------
Q 047286 540 -I----------------IKCTNFIASLPQGSD-LNVGERGLQLSGGLKQRIARTRARNY-------------------- 581 (632)
Q Consensus 540 -~----------------~~~~~~i~~lp~g~d-t~vge~G~~LSgGQrQRiaiARA~~~-------------------- 581 (632)
+ ..+.+++..+ |++ ........+||||||||++||||++.
T Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~ 187 (265)
T TIGR02769 110 IIGEPLRHLTSLDESEQKARIAELLDMV--GLRSEDADKLPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQA 187 (265)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 0 0111222222 453 23456678899999999999999554
Q ss_pred -----------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhHHHH
Q 047286 582 -----------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYASLT 626 (632)
Q Consensus 582 -----------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~ 626 (632)
+++||.+..+. .||+|++|++|++++.|+++++++.++..|+.+.
T Consensus 188 ~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 188 VILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred HHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcCCCCHHHHHHH
Confidence 68899999986 5999999999999999999999975244555554
No 431
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=99.73 E-value=6.1e-18 Score=163.30 Aligned_cols=133 Identities=23% Similarity=0.313 Sum_probs=99.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-----------------cHHhhcceEEEcccCc--ccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-----------------PEAEQEKIGLVSKEPI--FLFCDFNEG 145 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-----------------~~~~r~~i~~v~Q~~~--~~~~~~~~~ 145 (632)
.+||+|++||+++|+||||||||||+++|.|+.... ....++.++|++|++. ++..++.+
T Consensus 10 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~tv~~- 88 (190)
T TIGR01166 10 GLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFAADVDQ- 88 (190)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhccccccHHH-
Confidence 399999999999999999999999999998653210 0124567999999983 45445554
Q ss_pred cccccCC--CCCC----HHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHH
Q 047286 146 QYIPYGK--QNAS----DEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQ 198 (632)
Q Consensus 146 ~~i~~~~--~~~~----~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~ 198 (632)
|+.+.. ...+ .+++.++++..++.+ .+.+||.|..+++ +|++||+.+++.+.
T Consensus 89 -nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~ 167 (190)
T TIGR01166 89 -DVAFGPLNLGLSEAEVERRVREALTAVGASGLRERPTHCLSGGEKKRVAIAGAVAMRPDVLLLDEPTAGLDPAGREQML 167 (190)
T ss_pred -HHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHH
Confidence 555431 1112 234567777777654 4567888988877 39999999999999
Q ss_pred HHHHHHh-CCceEEEEecCchH
Q 047286 199 AAMVKLV-TNQTVVIVANCLIT 219 (632)
Q Consensus 199 ~~l~~~~-~~~tviiitH~~~~ 219 (632)
+.|+++. +++|+|++||+++.
T Consensus 168 ~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 168 AILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred HHHHHHHHcCCEEEEEeecccc
Confidence 9999885 47899999999864
No 432
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.73 E-value=1.3e-17 Score=166.98 Aligned_cols=116 Identities=27% Similarity=0.273 Sum_probs=85.4
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cH--------------------HHHHH------
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IY--------------------SWIII------ 541 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~--------------------~~~~~------ 541 (632)
-+|.-++++||+||+|||||||+++|.|++.|++. .. ...+.
T Consensus 23 ~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~ 102 (239)
T cd03296 23 LDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVK 102 (239)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEecCCcccCCCCHHHHHhhhhhhc
Confidence 34555568999999999999999999999877430 00 00000
Q ss_pred -------------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------------
Q 047286 542 -------------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------------- 581 (632)
Q Consensus 542 -------------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------------- 581 (632)
.+.+.+..+ |++........+||||||||++||||+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~ 180 (239)
T cd03296 103 PRSERPPEAEIRAKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLR 180 (239)
T ss_pred cccccCCHHHHHHHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHH
Confidence 011222222 34444455667899999999999999554
Q ss_pred ----------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ----------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ----------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 181 ~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 181 RLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 68899999765 5999999999999999999999865
No 433
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.73 E-value=1.2e-17 Score=170.88 Aligned_cols=119 Identities=23% Similarity=0.219 Sum_probs=88.5
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------c---HHHH-------------------H-HH--
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------I---YSWI-------------------I-IK-- 542 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~---~~~~-------------------~-~~-- 542 (632)
+++-+|.-++++||+|++|||||||+++|+|+++|++. . .... + .+
T Consensus 25 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~ 104 (279)
T PRK13650 25 DVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVEDDVA 104 (279)
T ss_pred eeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHHHHH
Confidence 34446666779999999999999999999999987541 0 0000 0 00
Q ss_pred ----------------HHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 543 ----------------CTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 543 ----------------~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
+.+.+..+ |++........+||||||||++||||+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~ 182 (279)
T PRK13650 105 FGLENKGIPHEEMKERVNEALELV--GMQDFKEREPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKT 182 (279)
T ss_pred hhHHhCCCCHHHHHHHHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH
Confidence 01111111 44444455667999999999999999544
Q ss_pred ------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+..||+|++|++|++++.|+.+++...
T Consensus 183 l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 183 IKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 688999999889999999999999999999998764
No 434
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=99.73 E-value=1.3e-17 Score=175.73 Aligned_cols=121 Identities=24% Similarity=0.300 Sum_probs=88.9
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh--hcH-----------HHH---------------------HH----
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ--VIY-----------SWI---------------------II---- 541 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~--~~~-----------~~~---------------------~~---- 541 (632)
-+|.-+++++|+||||||||||+++|.|++.|++ -.. ... +.
T Consensus 26 l~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~ 105 (362)
T TIGR03258 26 LEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLR 105 (362)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHH
Confidence 3455556899999999999999999999988754 100 000 00
Q ss_pred -----------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------------
Q 047286 542 -----------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------------- 581 (632)
Q Consensus 542 -----------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------------- 581 (632)
.+.+.+..+ |++........+||||||||+|||||+..
T Consensus 106 ~~~~~~~~~~~~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l 183 (362)
T TIGR03258 106 AQKMPKADIAERVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAAL 183 (362)
T ss_pred HcCCCHHHHHHHHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHH
Confidence 111222222 45555556677999999999999999543
Q ss_pred ---------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 ---------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 ---------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
+++||.++.+ +.||+|+||++|+|++.|+.+|+..++...|
T Consensus 184 ~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~~~~ 234 (362)
T TIGR03258 184 HEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPADGF 234 (362)
T ss_pred HHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcCcHH
Confidence 6779998875 5699999999999999999999998644333
No 435
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=99.73 E-value=1.5e-17 Score=165.90 Aligned_cols=116 Identities=18% Similarity=0.204 Sum_probs=86.7
Q ss_pred cccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHHH-----------------------H---
Q 047286 499 RGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSWI-----------------------I--- 540 (632)
Q Consensus 499 ~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~~-----------------------~--- 540 (632)
+-+|.-++++||+||+|||||||+++|.|+++|++. ..... +
T Consensus 20 s~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~ 99 (232)
T cd03218 20 SLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEENILAV 99 (232)
T ss_pred eeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEecCCccccccCcHHHHHHHH
Confidence 335555678999999999999999999999877430 00000 0
Q ss_pred ------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------------
Q 047286 541 ------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------------- 581 (632)
Q Consensus 541 ------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------------- 581 (632)
..+.+++..+ |++........+||||||||++||||+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~ 177 (232)
T cd03218 100 LEIRGLSKKEREEKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIK 177 (232)
T ss_pred HHhcCCCHHHHHHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHH
Confidence 0112333333 55555566778999999999999999654
Q ss_pred ---------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhc
Q 047286 582 ---------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMK 616 (632)
Q Consensus 582 ---------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~ 616 (632)
+++||.+..+ +.||+|++|++|++++.|+++++..
T Consensus 178 ~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 178 ILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 6889999765 5699999999999999999999875
No 436
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.73 E-value=1.1e-17 Score=162.90 Aligned_cols=142 Identities=18% Similarity=0.204 Sum_probs=108.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~ 149 (632)
.+||++++||+++|+||||||||||+++|.|+.... ....+++++|++|++.++. .++.+ |+.
T Consensus 19 ~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~~~ 96 (200)
T PRK13540 19 QISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVGHRSGINPYLTLRE--NCL 96 (200)
T ss_pred eeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEeccccccCcCCCHHH--HHH
Confidence 399999999999999999999999999998653211 1234678999999987643 45555 555
Q ss_pred cCCC-CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-C
Q 047286 150 YGKQ-NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-T 206 (632)
Q Consensus 150 ~~~~-~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~ 206 (632)
++.. .....++.++++..++.+ .+..||.|..+++ +|++||+.+++.+.+.|+++. +
T Consensus 97 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~ 176 (200)
T PRK13540 97 YDIHFSPGAVGITELCRLFSLEHLIDYPCGLLSSGQKRQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAK 176 (200)
T ss_pred HHHhcCcchHHHHHHHHHcCCchhhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHc
Confidence 4321 122345677777766543 3567889988777 399999999999999999874 4
Q ss_pred CceEEEEecCchHHhhcCeEEE
Q 047286 207 NQTVVIVANCLITIRNADCIIM 228 (632)
Q Consensus 207 ~~tviiitH~~~~~~~aD~i~v 228 (632)
+.|+|++||+...+..||.-.+
T Consensus 177 ~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 177 GGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred CCEEEEEeCCchhccccchhhc
Confidence 7899999999999988997543
No 437
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=99.72 E-value=2.4e-17 Score=187.50 Aligned_cols=156 Identities=19% Similarity=0.218 Sum_probs=115.1
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh----hcceEEEcccCcccccccccccccccCCCC----CCH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE----QEKIGLVSKEPIFLFCDFNEGQYIPYGKQN----ASD 157 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~----r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~----~~~ 157 (632)
+||+|++|++++|+||||||||||+++|+|........+ .-.+||++|++..++...+..+|+.++... ...
T Consensus 338 vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~i~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~ 417 (635)
T PRK11147 338 FSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHCGTKLEVAYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRP 417 (635)
T ss_pred cEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCCcEEEEEeCcccccCCCCCHHHHHHhhcccccccchH
Confidence 899999999999999999999999999996532221111 125999999863333333333355443211 113
Q ss_pred HHHHHHHHHccc-----hhhHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHhCCceEEEEec
Q 047286 158 EHIRPAVQLANA-----EKSIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLVTNQTVVIVAN 215 (632)
Q Consensus 158 ~~~~~~~~~~~l-----~~~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~~~~tviiitH 215 (632)
.++.+.++..++ +..+..||+|.++++ +|++||+.+.+.+.+.++++ +.|+|+|||
T Consensus 418 ~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSH 495 (635)
T PRK11147 418 RHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSH 495 (635)
T ss_pred HHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEEC
Confidence 456667776655 335788999999888 39999999999999999886 459999999
Q ss_pred CchHHhh-cCeEEEEe-CCeEEE-ecChhHH
Q 047286 216 CLITIRN-ADCIIMVS-KGKIVE-KGTHDEL 243 (632)
Q Consensus 216 ~~~~~~~-aD~i~vl~-~G~i~~-~g~~~el 243 (632)
+...+.. ||++++|+ +|++.. .|++++.
T Consensus 496 d~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y 526 (635)
T PRK11147 496 DRQFVDNTVTECWIFEGNGKIGRYVGGYHDA 526 (635)
T ss_pred CHHHHHHhcCEEEEEeCCCeEEEccCCHHHH
Confidence 9998865 99999998 899876 4665554
No 438
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.72 E-value=2.4e-17 Score=166.01 Aligned_cols=123 Identities=20% Similarity=0.203 Sum_probs=88.4
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChh-----h---------hcH----HHH-------------------H
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPE-----Q---------VIY----SWI-------------------I 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~-----~---------~~~----~~~-------------------~ 540 (632)
++-+|.-++++||+|+||||||||+++|.|++.|+ + +.. ... .
T Consensus 20 vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~tv~ 99 (247)
T TIGR00972 20 INLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPFPMSIY 99 (247)
T ss_pred eeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccCCCCHH
Confidence 33456666799999999999999999999999875 3 100 000 0
Q ss_pred HHH-------------------HHHHhcCCCccC----cccccCCCCCChHHHHHHHHHHHHhh----------------
Q 047286 541 IKC-------------------TNFIASLPQGSD----LNVGERGLQLSGGLKQRIARTRARNY---------------- 581 (632)
Q Consensus 541 ~~~-------------------~~~i~~lp~g~d----t~vge~G~~LSgGQrQRiaiARA~~~---------------- 581 (632)
.++ .+.+..+ |++ ........+||||||||++||||+..
T Consensus 100 e~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~ 177 (247)
T TIGR00972 100 DNIAYGPRLHGIKDKKELDEIVEESLKKA--ALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDP 177 (247)
T ss_pred HHHHhHHHhcCCCCHHHHHHHHHHHHHHc--CCCcchhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 010 0111111 333 33455678999999999999999654
Q ss_pred -------------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 -------------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 -------------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
++++|++..+. .||+|++|++|+|++.|++++++..+...+
T Consensus 178 ~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 238 (247)
T TIGR00972 178 IATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFTNPKEKR 238 (247)
T ss_pred HHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCChH
Confidence 78899999875 699999999999999999999986433433
No 439
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.72 E-value=1.8e-17 Score=170.25 Aligned_cols=120 Identities=23% Similarity=0.259 Sum_probs=89.2
Q ss_pred CcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hcH-------HHH--------------------
Q 047286 496 STVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VIY-------SWI-------------------- 539 (632)
Q Consensus 496 ~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~~-------~~~-------------------- 539 (632)
.++..+|.-++++||+||||||||||+++|+|+++|+. +.. ...
T Consensus 24 ~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv 103 (286)
T PRK13646 24 HDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTV 103 (286)
T ss_pred eeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhheEEEecChHhccchhhH
Confidence 34444566667999999999999999999999988743 100 000
Q ss_pred ---H---------------HHHHHHHhcCCCccCc-ccccCCCCCChHHHHHHHHHHHHhh-------------------
Q 047286 540 ---I---------------IKCTNFIASLPQGSDL-NVGERGLQLSGGLKQRIARTRARNY------------------- 581 (632)
Q Consensus 540 ---~---------------~~~~~~i~~lp~g~dt-~vge~G~~LSgGQrQRiaiARA~~~------------------- 581 (632)
+ ..+.+.+.. -|+++ .......+||||||||++||||+..
T Consensus 104 ~e~i~~~~~~~~~~~~~~~~~~~~~l~~--~gL~~~~~~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~ 181 (286)
T PRK13646 104 EREIIFGPKNFKMNLDEVKNYAHRLLMD--LGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSK 181 (286)
T ss_pred HHHHHhhHHHcCCCHHHHHHHHHHHHHH--cCCChhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHH
Confidence 0 011122222 26664 3456788999999999999999544
Q ss_pred ------------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ------------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ------------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.+..+ +.||+|++|++|+|++.|+++++.+.
T Consensus 182 ~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 182 RQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred HHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 7889999987 46999999999999999999998874
No 440
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.72 E-value=3e-17 Score=163.39 Aligned_cols=126 Identities=22% Similarity=0.197 Sum_probs=89.9
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCCh----hh---------hcHHHH---------------------H-HHH-
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNP----EQ---------VIYSWI---------------------I-IKC- 543 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~----~~---------~~~~~~---------------------~-~~~- 543 (632)
-+|+-+++++|+||+|||||||+++|+|+++| ++ +..... + .++
T Consensus 7 ~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t~~~~~~ 86 (230)
T TIGR02770 7 LSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFTMGNHAI 86 (230)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccCHHHHHH
Confidence 34555668899999999999999999999987 33 000000 0 000
Q ss_pred -----------------HHHHhcCCCccC---cccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 544 -----------------TNFIASLPQGSD---LNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 544 -----------------~~~i~~lp~g~d---t~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
.+.+..+ |++ +.......+||||||||++||||+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l 164 (230)
T TIGR02770 87 ETLRSLGKLSKQARALILEALEAV--GLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARV 164 (230)
T ss_pred HHHHHcCccHHHHHHHHHHHHHHc--CCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHH
Confidence 0111111 222 33456678899999999999999554
Q ss_pred ---------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhHH-HHH
Q 047286 582 ---------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYAS-LTA 627 (632)
Q Consensus 582 ---------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~-l~~ 627 (632)
++++|+++.+. .||+|++|++|++++.|+++++...+.+.|.+ +++
T Consensus 165 ~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~~ 227 (230)
T TIGR02770 165 LKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTRKLLS 227 (230)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHHHHHH
Confidence 67899999885 69999999999999999999998654455554 443
No 441
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=99.72 E-value=1.9e-17 Score=176.04 Aligned_cols=125 Identities=21% Similarity=0.306 Sum_probs=90.1
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cHHHH----------------------H-H---
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IYSWI----------------------I-I--- 541 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~~~~----------------------~-~--- 541 (632)
-+|+-++.++|+||||||||||+++|.|+++|++ + ..... + .
T Consensus 49 l~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~ 128 (400)
T PRK10070 49 LAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTA 128 (400)
T ss_pred EEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHH
Confidence 3555567999999999999999999999998753 0 00000 0 0
Q ss_pred ---------------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 542 ---------------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 542 ---------------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
.+.+.+..+ |++........+||||||||++||||+..
T Consensus 129 ~~~~~~~~~~~~~~~~~~e~L~~~--gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~ 206 (400)
T PRK10070 129 FGMELAGINAEERREKALDALRQV--GLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDE 206 (400)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHc--CCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHH
Confidence 011222222 44444455667899999999999999544
Q ss_pred ------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchh-HHHH
Q 047286 582 ------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTY-ASLT 626 (632)
Q Consensus 582 ------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y-~~l~ 626 (632)
+++||.++.+ +.||+|++|++|+|++.|++++++..+...| +.++
T Consensus 207 L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v~~~~ 265 (400)
T PRK10070 207 LVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFF 265 (400)
T ss_pred HHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHHHHHH
Confidence 6789999887 4699999999999999999999987533333 4444
No 442
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=99.72 E-value=1e-17 Score=171.62 Aligned_cols=136 Identities=18% Similarity=0.239 Sum_probs=88.9
Q ss_pred eeCCCEEEEEcCCCchHHHHHHHHHhCCCC------CcHHhhc--------------------------ceEEEcccCcc
Q 047286 90 VPSGTTVALVGQSGSGKSTVINLVESFRFY------APEAEQE--------------------------KIGLVSKEPIF 137 (632)
Q Consensus 90 i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~------~~~~~r~--------------------------~i~~v~Q~~~~ 137 (632)
.++|++++|+||||-||||.+++|.|.... .|..|-. ++-||.--|-.
T Consensus 97 pr~G~V~GilG~NGiGKsTalkILaGel~PNLG~~~~pp~wdeVi~~FrGtELq~YF~~l~~g~~r~v~K~QYVd~iPk~ 176 (591)
T COG1245 97 PRPGKVVGILGPNGIGKSTALKILAGELKPNLGRYEDPPSWDEVIKRFRGTELQNYFKKLYEGELRAVHKPQYVDLIPKV 176 (591)
T ss_pred CCCCcEEEEEcCCCccHHHHHHHHhCccccCCCCCCCCCCHHHHHHHhhhhHHHHHHHHHHcCCcceecchHHHHHHHHH
Confidence 578999999999999999999999864211 1111100 11111111112
Q ss_pred cccccccccccccCCCCCCHHHHHHHHHHcc----chhhHhhCCcccccccc-----------------cCCCCHHHHHH
Q 047286 138 LFCDFNEGQYIPYGKQNASDEHIRPAVQLAN----AEKSIDKLPLGLDTVVA-----------------TNAVDAQSERI 196 (632)
Q Consensus 138 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----l~~~i~~l~~g~~~~v~-----------------ts~LD~~~~~~ 196 (632)
+.+++.+ .+.-....- ..+++++..+ +++.+.+|++|.-++++ +|-||...+-.
T Consensus 177 ~KG~v~e--lLk~~de~g---~~devve~l~L~nvl~r~v~~LSGGELQr~aIaa~l~rdADvY~FDEpsSyLDi~qRl~ 251 (591)
T COG1245 177 VKGKVGE--LLKKVDERG---KFDEVVERLGLENVLDRDVSELSGGELQRVAIAAALLRDADVYFFDEPSSYLDIRQRLN 251 (591)
T ss_pred hcchHHH--HHHhhhhcC---cHHHHHHHhcchhhhhhhhhhcCchHHHHHHHHHHHhccCCEEEEcCCcccccHHHHHH
Confidence 2222221 010000011 2233444444 45678999999988874 88999999999
Q ss_pred HHHHHHHHhC-CceEEEEecCchHHhh-cCeEEEEe
Q 047286 197 VQAAMVKLVT-NQTVVIVANCLITIRN-ADCIIMVS 230 (632)
Q Consensus 197 i~~~l~~~~~-~~tviiitH~~~~~~~-aD~i~vl~ 230 (632)
..+.|+++.+ +++|++|.||+..+.+ +|.|.++-
T Consensus 252 ~ar~Irel~~~~k~ViVVEHDLavLD~lsD~vhI~Y 287 (591)
T COG1245 252 AARVIRELAEDGKYVIVVEHDLAVLDYLSDFVHILY 287 (591)
T ss_pred HHHHHHHHhccCCeEEEEechHHHHHHhhheeEEEe
Confidence 9999999976 7999999999999987 99988774
No 443
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.72 E-value=2.4e-17 Score=167.77 Aligned_cols=130 Identities=23% Similarity=0.267 Sum_probs=91.7
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc---HHHH------------------------H-
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI---YSWI------------------------I- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---~~~~------------------------~- 540 (632)
+.-+|+-++++||+||+|||||||+++|+|+++|++ +. .... +
T Consensus 32 vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~ 111 (267)
T PRK15112 32 LSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILD 111 (267)
T ss_pred eeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchhhHhccEEEEecCchhhcCcchhHHHHHH
Confidence 333555567999999999999999999999998743 00 0000 0
Q ss_pred ---------------HHHHHHHhcCCCccCc-ccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 541 ---------------IKCTNFIASLPQGSDL-NVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 541 ---------------~~~~~~i~~lp~g~dt-~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
..+.+.+..+ |++. .......+||||||||++||||+..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~ 189 (267)
T PRK15112 112 FPLRLNTDLEPEQREKQIIETLRQV--GLLPDHASYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLI 189 (267)
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHc--CCChHHHhcCchhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHH
Confidence 0011112211 2221 1122346899999999999999554
Q ss_pred --------------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhccC-CchhHHHHHhh
Q 047286 582 --------------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKIT-DGTYASLTALH 629 (632)
Q Consensus 582 --------------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~~-~g~y~~l~~~~ 629 (632)
+++||+++.+.. ||+|++|++|+|++.|+++++...+ ...|+++++.+
T Consensus 190 ~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 190 NLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGH 253 (267)
T ss_pred HHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHhcCCCCHHHHHHHHhc
Confidence 788999999976 9999999999999999999998752 35577787654
No 444
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.72 E-value=2.2e-17 Score=172.81 Aligned_cols=66 Identities=17% Similarity=0.080 Sum_probs=56.7
Q ss_pred ccCCCCCChHHHHHHHHHHHHhh-------------------------------------hccccchhhhh-cCCEEEEE
Q 047286 559 GERGLQLSGGLKQRIARTRARNY-------------------------------------CGCGSPPYHYK-NADITSVV 600 (632)
Q Consensus 559 ge~G~~LSgGQrQRiaiARA~~~-------------------------------------~~iahrl~~~~-~aD~I~vl 600 (632)
.....+||||||||++||||+.. +++||.++.++ .||+|+||
T Consensus 153 ~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm 232 (330)
T PRK15093 153 RSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVL 232 (330)
T ss_pred hCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 34556899999999999999544 78899999995 59999999
Q ss_pred eCCeEeeecChHHHhccCCchhHH
Q 047286 601 KNGVIAEKGRHDALMKITDGTYAS 624 (632)
Q Consensus 601 ~~G~ive~G~h~eL~~~~~g~y~~ 624 (632)
++|+|+|.|+.+++.+.+...|.+
T Consensus 233 ~~G~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 233 YCGQTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred ECCEEEEECCHHHHHhCCCCHHHH
Confidence 999999999999998765556765
No 445
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=99.72 E-value=1.5e-17 Score=164.54 Aligned_cols=113 Identities=32% Similarity=0.416 Sum_probs=89.0
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cHHH--------------------------
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IYSW-------------------------- 538 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~~~-------------------------- 538 (632)
++.-+|.-++.+||+||+|||||||+++|.|+++|++ + ....
T Consensus 22 ~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~ 101 (220)
T cd03245 22 NVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFYGTLRDNITLG 101 (220)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCccccchHHHHhhcC
Confidence 3334555567999999999999999999999976632 0 0000
Q ss_pred -------H------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 539 -------I------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 539 -------~------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
. ..++.+.+..+|.|++|.+.....+||||||||++||||+..
T Consensus 102 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~ 181 (220)
T cd03245 102 APLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKE 181 (220)
T ss_pred CCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHH
Confidence 0 002335667788899999988889999999999999999554
Q ss_pred -----------hccccchhhhhcCCEEEEEeCCeEeeec
Q 047286 582 -----------CGCGSPPYHYKNADITSVVKNGVIAEKG 609 (632)
Q Consensus 582 -----------~~iahrl~~~~~aD~I~vl~~G~ive~G 609 (632)
+++||.+..++.||+|++|++|++++.|
T Consensus 182 ~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 182 RLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 6789999988999999999999999865
No 446
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=99.72 E-value=1.9e-17 Score=167.73 Aligned_cols=127 Identities=21% Similarity=0.264 Sum_probs=93.3
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh-------c----------HHH-----H---------------
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV-------I----------YSW-----I--------------- 539 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~-------~----------~~~-----~--------------- 539 (632)
++.-+|.-++++||+||+|||||||+++|.|+++|++. . ... .
T Consensus 24 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 103 (258)
T PRK11701 24 DVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQHPRDGLR 103 (258)
T ss_pred eeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHHHHhhcceEEEeeCcccccC
Confidence 33445666779999999999999999999999876421 0 000 0
Q ss_pred --------H----------------HHHHHHHhcCCCccC-cccccCCCCCChHHHHHHHHHHHHhh-------------
Q 047286 540 --------I----------------IKCTNFIASLPQGSD-LNVGERGLQLSGGLKQRIARTRARNY------------- 581 (632)
Q Consensus 540 --------~----------------~~~~~~i~~lp~g~d-t~vge~G~~LSgGQrQRiaiARA~~~------------- 581 (632)
+ ..+.+++..+ |++ +.....+.+||||||||++||||+..
T Consensus 104 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS~Gq~qrl~laral~~~p~llllDEPt~~ 181 (258)
T PRK11701 104 MQVSAGGNIGERLMAVGARHYGDIRATAGDWLERV--EIDAARIDDLPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGG 181 (258)
T ss_pred ccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHc--CCChhHHhCCCccCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 0 0112233333 333 34567788999999999999999554
Q ss_pred ------------------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhHHH
Q 047286 582 ------------------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYASL 625 (632)
Q Consensus 582 ------------------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l 625 (632)
+++||+++.+. .||+|++|++|++++.|+++++..++...|.+.
T Consensus 182 LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~~~~~~~~ 250 (258)
T PRK11701 182 LDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQVLDDPQHPYTQL 250 (258)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCCCCHHHHH
Confidence 68899999997 599999999999999999999986544446543
No 447
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.72 E-value=2.6e-17 Score=161.06 Aligned_cols=144 Identities=15% Similarity=0.181 Sum_probs=109.3
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC-------c-----HHhhcceEEEcccCcccc-cccccccccccC
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA-------P-----EAEQEKIGLVSKEPIFLF-CDFNEGQYIPYG 151 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~-------~-----~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~~~ 151 (632)
.+||+|++||+++|+||||||||||+++|.|..... . ...++.++|++|++.++. .++.+ |+.+.
T Consensus 20 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~tv~~--~l~~~ 97 (207)
T PRK13539 20 GLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALTVAE--NLEFW 97 (207)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCcHHH--HHHHH
Confidence 399999999999999999999999999998653211 0 014667999998876432 34444 55432
Q ss_pred C--CCCCHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-CC
Q 047286 152 K--QNASDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV-TN 207 (632)
Q Consensus 152 ~--~~~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~-~~ 207 (632)
. .....+++.++++..++.+. ...+|.|..+++ +|++||+.+++.+.+.|+++. ++
T Consensus 98 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~ 177 (207)
T PRK13539 98 AAFLGGEELDIAAALEAVGLAPLAHLPFGYLSAGQKRRVALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQG 177 (207)
T ss_pred HHhcCCcHHHHHHHHHHcCCHHHHcCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCC
Confidence 1 11234567888888887543 457888988877 399999999999999999874 57
Q ss_pred ceEEEEecCchHHhhcCeEEEEeC
Q 047286 208 QTVVIVANCLITIRNADCIIMVSK 231 (632)
Q Consensus 208 ~tviiitH~~~~~~~aD~i~vl~~ 231 (632)
.|+|++||+...+.. |+++-++.
T Consensus 178 ~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 178 GIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred CEEEEEeCCchhhcc-CcEEeecC
Confidence 899999999999887 99987754
No 448
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=99.72 E-value=2.4e-17 Score=151.40 Aligned_cols=161 Identities=16% Similarity=0.286 Sum_probs=124.2
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC--------C---------cHHhhcceEEEcccCccccc-cccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY--------A---------PEAEQEKIGLVSKEPIFLFC-DFNEGQ 146 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~--------~---------~~~~r~~i~~v~Q~~~~~~~-~~~~~~ 146 (632)
++||++.+||.-+|+||||+||||++..|.|.... + ..-.|..||--+|.|..|.. ++.+
T Consensus 23 ~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKtrp~~G~v~f~g~~dl~~~~e~~IAr~GIGRKFQ~PtVfe~ltV~e-- 100 (249)
T COG4674 23 DLSFSVDPGELRVLIGPNGAGKTTLMDVITGKTRPQEGEVLFDGDTDLTKLPEHRIARAGIGRKFQKPTVFENLTVRE-- 100 (249)
T ss_pred eeEEEecCCeEEEEECCCCCCceeeeeeecccCCCCcceEEEcCchhhccCCHHHHHHhccCccccCCeehhhccHHH--
Confidence 49999999999999999999999999999754211 1 11246679999999986643 3444
Q ss_pred ccccC--C------------CCCCHHHHHHHHHHccchhh----HhhCCccccccc-----------------ccCCCCH
Q 047286 147 YIPYG--K------------QNASDEHIRPAVQLANAEKS----IDKLPLGLDTVV-----------------ATNAVDA 191 (632)
Q Consensus 147 ~i~~~--~------------~~~~~~~~~~~~~~~~l~~~----i~~l~~g~~~~v-----------------~ts~LD~ 191 (632)
|+... . .....+++++++...++.+. ...|++|.++.+ +++|+-.
T Consensus 101 NLelA~~~~k~v~a~L~~r~~~~e~~ride~La~igL~~~~~~~A~~LSHGqKQwLEIGMll~Q~P~lLLlDEPvAGMTd 180 (249)
T COG4674 101 NLELALNRDKSVFASLFARLRAEERRRIDELLATIGLGDERDRLAALLSHGQKQWLEIGMLLAQDPKLLLLDEPVAGMTD 180 (249)
T ss_pred HHHHHhcCCcchHHHhhhhcChhHHHHHHHHHHHcccchhhhhhhhhhccchhhhhhhheeeccCCcEEEecCccCCCcH
Confidence 43321 1 11234578888888876543 457889988766 3778766
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCeEEEecChhHHhcCC
Q 047286 192 QSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGKIVEKGTHDELIEDP 247 (632)
Q Consensus 192 ~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g~~~el~~~~ 247 (632)
......-+.++.+..++++++|.||+..++. ||+|-||+.|.+.++|+.+++.+++
T Consensus 181 ~Et~~taeLl~~la~~hsilVVEHDM~Fvr~~A~~VTVlh~G~VL~EGsld~v~~dp 237 (249)
T COG4674 181 AETEKTAELLKSLAGKHSILVVEHDMGFVREIADKVTVLHEGSVLAEGSLDEVQNDP 237 (249)
T ss_pred HHHHHHHHHHHHHhcCceEEEEeccHHHHHHhhheeEEEeccceeecccHHHhhcCc
Confidence 6677788889999889999999999999976 9999999999999999999997664
No 449
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.72 E-value=2.4e-17 Score=165.31 Aligned_cols=127 Identities=20% Similarity=0.244 Sum_probs=90.3
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHHH-----------------H--------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSWI-----------------I-------- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~~-----------------~-------- 540 (632)
+.-+|.-++++||+||||||||||+++|.|+++|++. ..... +
T Consensus 22 vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~ 101 (241)
T PRK14250 22 ISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFEGTVKDNIEYGP 101 (241)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEEEecCchhchhhHHHHHhcch
Confidence 3335555668999999999999999999999877430 00000 0
Q ss_pred -------HHHHHHHhcCCCccC-cccccCCCCCChHHHHHHHHHHHHhh-------------------------------
Q 047286 541 -------IKCTNFIASLPQGSD-LNVGERGLQLSGGLKQRIARTRARNY------------------------------- 581 (632)
Q Consensus 541 -------~~~~~~i~~lp~g~d-t~vge~G~~LSgGQrQRiaiARA~~~------------------------------- 581 (632)
..+.+++..+ |++ ........+||||||||++||||+..
T Consensus 102 ~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~ 179 (241)
T PRK14250 102 MLKGEKNVDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKN 179 (241)
T ss_pred hhcCcHHHHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH
Confidence 0111222222 332 12345667899999999999999554
Q ss_pred ------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhHHHH
Q 047286 582 ------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYASLT 626 (632)
Q Consensus 582 ------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~ 626 (632)
+++||.+..+. .||+|++|++|++++.|+.+++...+...|...+
T Consensus 180 ~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~ 231 (241)
T PRK14250 180 KMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTKLF 231 (241)
T ss_pred hCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHHHH
Confidence 68899999876 5999999999999999999999875333455443
No 450
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=99.71 E-value=1.3e-17 Score=165.06 Aligned_cols=116 Identities=22% Similarity=0.195 Sum_probs=84.3
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH-----------------------HH---
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI-----------------------II--- 541 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~-----------------------~~--- 541 (632)
-+|.-++++||+||||||||||+++|.|++.|++ ...... +.
T Consensus 21 ~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~ 100 (222)
T cd03224 21 LTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEENLLLGA 100 (222)
T ss_pred EEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHh
Confidence 3555567999999999999999999999987743 000000 00
Q ss_pred ----------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------------
Q 047286 542 ----------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------------ 581 (632)
Q Consensus 542 ----------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------------ 581 (632)
.+.+++..++ +++........+||||||||++||||+..
T Consensus 101 ~~~~~~~~~~~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~ 179 (222)
T cd03224 101 YARRRAKRKARLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELR 179 (222)
T ss_pred hhcCchhHHHHHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHH
Confidence 1112222221 23334445667899999999999999654
Q ss_pred ------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhc
Q 047286 582 ------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMK 616 (632)
Q Consensus 582 ------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~ 616 (632)
+++||.++.+. .||+|++|++|++++.|+.+++..
T Consensus 180 ~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 180 DEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred HCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 78899999865 599999999999999999998864
No 451
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=99.71 E-value=2e-17 Score=164.09 Aligned_cols=144 Identities=19% Similarity=0.172 Sum_probs=105.6
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCC-------C------c------HH---h-hcceEEEcccCcccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFY-------A------P------EA---E-QEKIGLVSKEPIFLFCD 141 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~-------~------~------~~---~-r~~i~~v~Q~~~~~~~~ 141 (632)
.+||+|++||+++|+||||||||||+++|.|+... + . .. . ++.++|++|++.++..
T Consensus 26 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~- 104 (224)
T TIGR02324 26 NVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQFLRVIPR- 104 (224)
T ss_pred cceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCHHHHHHHHhcceEEEecccccCCC-
Confidence 39999999999999999999999999999865211 0 0 00 1 3469999999875542
Q ss_pred cccccccccCC--CCC----CHHHHHHHHHHccchh-----hHhhCCccccccc-----------------ccCCCCHHH
Q 047286 142 FNEGQYIPYGK--QNA----SDEHIRPAVQLANAEK-----SIDKLPLGLDTVV-----------------ATNAVDAQS 193 (632)
Q Consensus 142 ~~~~~~i~~~~--~~~----~~~~~~~~~~~~~l~~-----~i~~l~~g~~~~v-----------------~ts~LD~~~ 193 (632)
.+..+|+.+.. ... ..+++.++++..++.+ .+..||.|..+++ +|++||+.+
T Consensus 105 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~ 184 (224)
T TIGR02324 105 VSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAAN 184 (224)
T ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHH
Confidence 22222443210 011 1345566777776643 3567888988777 399999999
Q ss_pred HHHHHHHHHHHh-CCceEEEEecCchHHh-hcCeEEEE
Q 047286 194 ERIVQAAMVKLV-TNQTVVIVANCLITIR-NADCIIMV 229 (632)
Q Consensus 194 ~~~i~~~l~~~~-~~~tviiitH~~~~~~-~aD~i~vl 229 (632)
++.+.+.|+++. ++.|+|++||+++.+. .||+++.+
T Consensus 185 ~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 185 RQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 999999999985 4789999999998886 59999876
No 452
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.71 E-value=3.4e-17 Score=165.42 Aligned_cols=117 Identities=23% Similarity=0.315 Sum_probs=88.2
Q ss_pred cccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc-------------H---HHH--------------
Q 047286 499 RGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI-------------Y---SWI-------------- 539 (632)
Q Consensus 499 ~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~-------------~---~~~-------------- 539 (632)
.-+|.-++++||+||||||||||+++|.|++.|++ +. . ...
T Consensus 20 s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 99 (252)
T TIGR03005 20 NFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLF 99 (252)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchhHHHHHhhCeEEEecCcccC
Confidence 33555567999999999999999999999987743 10 0 000
Q ss_pred --------H----------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------
Q 047286 540 --------I----------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------- 581 (632)
Q Consensus 540 --------~----------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------- 581 (632)
+ ..+.+.+..+ |++........+||||||||++||||+..
T Consensus 100 ~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~L 177 (252)
T TIGR03005 100 PHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMV--GLADKADHMPAQLSGGQQQRVAIARALAMRPKVMLFDEVTSAL 177 (252)
T ss_pred CCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CChhHhhcChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccC
Confidence 0 0112233332 45555566778999999999999999554
Q ss_pred -----------------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -----------------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -----------------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+. .||+|++|++|++++.|+++++.+.
T Consensus 178 D~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 237 (252)
T TIGR03005 178 DPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEIFRQ 237 (252)
T ss_pred CHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 68899999884 6999999999999999999999865
No 453
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.71 E-value=2.1e-17 Score=163.35 Aligned_cols=113 Identities=18% Similarity=0.214 Sum_probs=81.1
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------c---HHHH---------------------H------
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------I---YSWI---------------------I------ 540 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~---~~~~---------------------~------ 540 (632)
-+|.-++++||+||+|||||||+++|.|++.|++. . .... +
T Consensus 21 ~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 100 (220)
T cd03265 21 FRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGWENLYIHARL 100 (220)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecCCccccccCcHHHHHHHHHHH
Confidence 34555568999999999999999999999877430 0 0000 0
Q ss_pred ---------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------------
Q 047286 541 ---------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------------ 581 (632)
Q Consensus 541 ---------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------------ 581 (632)
..+.+.+..+ |++........+||||||||++||||++.
T Consensus 101 ~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~ 178 (220)
T cd03265 101 YGVPGAERRERIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLK 178 (220)
T ss_pred cCCCHHHHHHHHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHH
Confidence 0111222222 33333334456899999999999999554
Q ss_pred -------hccccchhhhh-cCCEEEEEeCCeEeeecChHHH
Q 047286 582 -------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDAL 614 (632)
Q Consensus 582 -------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL 614 (632)
+++||+++.+. .||+|++|++|+|++.|+.+++
T Consensus 179 ~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 179 EEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 77899999876 5999999999999999998875
No 454
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=99.71 E-value=2.7e-17 Score=164.91 Aligned_cols=118 Identities=25% Similarity=0.295 Sum_probs=88.1
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc---H--HHH----------------------H-
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI---Y--SWI----------------------I- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---~--~~~----------------------~- 540 (632)
+.-+|.-++++||+||+|||||||+++|.|++.|++ +. . ... +
T Consensus 20 ~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~ 99 (240)
T PRK09493 20 IDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVM 99 (240)
T ss_pred eeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcHHHHHH
Confidence 333555567999999999999999999999987743 00 0 000 0
Q ss_pred ---------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------
Q 047286 541 ---------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------ 581 (632)
Q Consensus 541 ---------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------ 581 (632)
..+.+.+..+ |++.........||||||||++||||+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~ 177 (240)
T PRK09493 100 FGPLRVRGASKEEAEKQARELLAKV--GLAERAHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLK 177 (240)
T ss_pred hHHHHhcCCCHHHHHHHHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 0111223332 55555556677899999999999999654
Q ss_pred ------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+. .||+|++|++|++++.|+++++++.
T Consensus 178 ~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 178 VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 78899999985 5999999999999999999999864
No 455
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=99.71 E-value=3.5e-17 Score=150.30 Aligned_cols=122 Identities=25% Similarity=0.252 Sum_probs=82.0
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh----hcceEEEcccCcccccccccccccccCCCCCCHHHH
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE----QEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHI 160 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~----r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~ 160 (632)
.++|++++||+++|+||||||||||+++|.|+......++ +..++|++| .+.-+.
T Consensus 18 ~~~~~~~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~~~~~i~~~~~---------------------lS~G~~ 76 (144)
T cd03221 18 DISLTINPGDRIGLVGRNGAGKSTLLKLIAGELEPDEGIVTWGSTVKIGYFEQ---------------------LSGGEK 76 (144)
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCeEEEEEEcc---------------------CCHHHH
Confidence 3899999999999999999999999999985532221111 235667766 011111
Q ss_pred HHHHHHccchhhHhhCCcccccccccCCCCHHHHHHHHHHHHHHhCCceEEEEecCchHHhh-cCeEEEEeCCe
Q 047286 161 RPAVQLANAEKSIDKLPLGLDTVVATNAVDAQSERIVQAAMVKLVTNQTVVIVANCLITIRN-ADCIIMVSKGK 233 (632)
Q Consensus 161 ~~~~~~~~l~~~i~~l~~g~~~~v~ts~LD~~~~~~i~~~l~~~~~~~tviiitH~~~~~~~-aD~i~vl~~G~ 233 (632)
+++. +..-+..-|.=+---=++++||+.++..+.+.++++ ++|++++||+++.+.. ||++++|++|+
T Consensus 77 ~rv~----laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~--~~til~~th~~~~~~~~~d~v~~l~~g~ 144 (144)
T cd03221 77 MRLA----LAKLLLENPNLLLLDEPTNHLDLESIEALEEALKEY--PGTVILVSHDRYFLDQVATKIIELEDGK 144 (144)
T ss_pred HHHH----HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEeCCC
Confidence 1110 000111111000000048999999999999999887 4799999999998865 99999999985
No 456
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=99.71 E-value=4.3e-17 Score=165.94 Aligned_cols=124 Identities=24% Similarity=0.252 Sum_probs=92.4
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc---HH---HH------------------------H
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI---YS---WI------------------------I 540 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---~~---~~------------------------~ 540 (632)
-+|.-+++++|+||+|||||||+++|.|+++|++ +. .. .. +
T Consensus 33 ~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l 112 (268)
T PRK10419 33 LSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREII 112 (268)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHH
Confidence 3455556999999999999999999999987743 00 00 00 0
Q ss_pred ----------------HHHHHHHhcCCCccCc-ccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 541 ----------------IKCTNFIASLPQGSDL-NVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 541 ----------------~~~~~~i~~lp~g~dt-~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
..+.+.+..+ |+++ ........||||||||++||||++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~ 190 (268)
T PRK10419 113 REPLRHLLSLDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGV 190 (268)
T ss_pred HHHHHhhccCCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHH
Confidence 0122333333 5653 4566778999999999999999554
Q ss_pred ---------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhHHHH
Q 047286 582 ---------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYASLT 626 (632)
Q Consensus 582 ---------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~ 626 (632)
+++||++..+. .||+|++|++|++++.|+++++... ++.|..-+
T Consensus 191 ~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 250 (268)
T PRK10419 191 IRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKLTF-SSPAGRVL 250 (268)
T ss_pred HHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhccCC-CCHHHHHH
Confidence 78899999987 5999999999999999999999975 66665443
No 457
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=99.71 E-value=2.5e-17 Score=165.47 Aligned_cols=117 Identities=26% Similarity=0.246 Sum_probs=84.9
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cH---HHH------------------H-HH
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IY---SWI------------------I-IK 542 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~---~~~------------------~-~~ 542 (632)
+++-+|.-++++||+||+|||||||+++|.|+++|++ + .. ... + .+
T Consensus 20 ~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~ 99 (243)
T TIGR02315 20 NINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLTVLEN 99 (243)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccccccHHHH
Confidence 3334556667999999999999999999999987743 0 00 000 0 00
Q ss_pred --------------------------HHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------
Q 047286 543 --------------------------CTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------- 581 (632)
Q Consensus 543 --------------------------~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------- 581 (632)
+.+.+..+ |++........+||||||||++||||+..
T Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD 177 (243)
T TIGR02315 100 VLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIARALAQQPDLILADEPIASLD 177 (243)
T ss_pred HhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 01111111 33334455678899999999999999554
Q ss_pred ----------------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHh
Q 047286 582 ----------------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALM 615 (632)
Q Consensus 582 ----------------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~ 615 (632)
+++||++..+. .||+|++|++|++++.|+++++.
T Consensus 178 ~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 178 PKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 67899999884 69999999999999999999974
No 458
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=99.71 E-value=2.7e-17 Score=173.49 Aligned_cols=116 Identities=22% Similarity=0.256 Sum_probs=87.2
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc-------H-HHH---------------------H--
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI-------Y-SWI---------------------I-- 540 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~-------~-~~~---------------------~-- 540 (632)
+|.-++.+||+||||||||||+++|.|+++|++ +. . ... +
T Consensus 20 ~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~ 99 (352)
T PRK11144 20 TLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKVRGNLRY 99 (352)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcHHHHHHh
Confidence 344456899999999999999999999988753 00 0 000 0
Q ss_pred -------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------------
Q 047286 541 -------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------------- 581 (632)
Q Consensus 541 -------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------------- 581 (632)
..+.+.+..+ |++........+||||||||++||||+..
T Consensus 100 ~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~ 177 (352)
T PRK11144 100 GMAKSMVAQFDKIVALL--GIEPLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE 177 (352)
T ss_pred hhhhhhHHHHHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh
Confidence 0112233332 45555556678999999999999999544
Q ss_pred -----hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccC
Q 047286 582 -----CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKIT 618 (632)
Q Consensus 582 -----~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~ 618 (632)
+++||.++.+. .||+|++|++|+|++.|+++++..++
T Consensus 178 ~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 178 INIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 78899998764 59999999999999999999999863
No 459
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.71 E-value=2.9e-17 Score=164.81 Aligned_cols=115 Identities=26% Similarity=0.233 Sum_probs=84.4
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---c---HHHH------------------H-HH---
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---I---YSWI------------------I-IK--- 542 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~---~~~~------------------~-~~--- 542 (632)
-+|.-++++||+||||||||||+++|.|+++|++ + . .... + .+
T Consensus 22 ~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~ 101 (241)
T cd03256 22 LSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERLSVLENVLS 101 (241)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccccCcHHHHHHh
Confidence 3455566899999999999999999999987743 0 0 0000 0 00
Q ss_pred -----------------------HHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------
Q 047286 543 -----------------------CTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------ 581 (632)
Q Consensus 543 -----------------------~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------ 581 (632)
+.+.+..+ |++........+||||||||++||||+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~ 179 (241)
T cd03256 102 GRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPAS 179 (241)
T ss_pred hhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHH
Confidence 01112221 34334455678999999999999999554
Q ss_pred -------------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhc
Q 047286 582 -------------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMK 616 (632)
Q Consensus 582 -------------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~ 616 (632)
+++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 180 ~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (241)
T cd03256 180 SRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELTD 234 (241)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhhH
Confidence 68899999987 799999999999999999999743
No 460
>PRK13409 putative ATPase RIL; Provisional
Probab=99.71 E-value=2.6e-17 Score=184.20 Aligned_cols=151 Identities=16% Similarity=0.175 Sum_probs=114.0
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHH--hhcceEEEcccCcccc-cccccccccccCCCCC-CHHHHH
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEA--EQEKIGLVSKEPIFLF-CDFNEGQYIPYGKQNA-SDEHIR 161 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~--~r~~i~~v~Q~~~~~~-~~~~~~~~i~~~~~~~-~~~~~~ 161 (632)
++++|++||+++|+||||||||||+++|.|+...+... +...++|++|++.++. .++.+ |+.++.... ......
T Consensus 358 ~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~~~i~y~~Q~~~~~~~~tv~e--~l~~~~~~~~~~~~~~ 435 (590)
T PRK13409 358 EGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPELKISYKPQYIKPDYDGTVED--LLRSITDDLGSSYYKS 435 (590)
T ss_pred cceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEeeeEEEecccccCCCCCcHHH--HHHHHhhhcChHHHHH
Confidence 67788999999999999999999999999654322111 1246899999976432 23433 555432111 233456
Q ss_pred HHHHHccchh----hHhhCCcccccccc-----------------cCCCCHHHHHHHHHHHHHHhC--CceEEEEecCch
Q 047286 162 PAVQLANAEK----SIDKLPLGLDTVVA-----------------TNAVDAQSERIVQAAMVKLVT--NQTVVIVANCLI 218 (632)
Q Consensus 162 ~~~~~~~l~~----~i~~l~~g~~~~v~-----------------ts~LD~~~~~~i~~~l~~~~~--~~tviiitH~~~ 218 (632)
++++..++.+ .+.+||+|.+++++ |++||+.++..+.+.|+++.+ ++|+|++|||+.
T Consensus 436 ~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~ 515 (590)
T PRK13409 436 EIIKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY 515 (590)
T ss_pred HHHHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 7777777643 46789999988883 999999999999999999853 789999999999
Q ss_pred HHhh-cCeEEEEeCCeEEEecC
Q 047286 219 TIRN-ADCIIMVSKGKIVEKGT 239 (632)
Q Consensus 219 ~~~~-aD~i~vl~~G~i~~~g~ 239 (632)
.+.. ||++++|++ ++...|+
T Consensus 516 ~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 516 MIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred HHHHhCCEEEEEcC-cceeeee
Confidence 8865 999999965 8877776
No 461
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.71 E-value=3.7e-17 Score=167.98 Aligned_cols=118 Identities=26% Similarity=0.286 Sum_probs=87.1
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc-----HHHH-------------------H-HH
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI-----YSWI-------------------I-IK 542 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~-----~~~~-------------------~-~~ 542 (632)
+++.+|.-++++||+||+|||||||+++|.|+++|++ +. .... + .+
T Consensus 25 ~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~ 104 (287)
T PRK13637 25 NVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKD 104 (287)
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHhhceEEEecCchhccccccHHHH
Confidence 3444666667999999999999999999999987743 00 0000 0 00
Q ss_pred ------------------HHHHHhcCCCccC--cccccCCCCCChHHHHHHHHHHHHhh---------------------
Q 047286 543 ------------------CTNFIASLPQGSD--LNVGERGLQLSGGLKQRIARTRARNY--------------------- 581 (632)
Q Consensus 543 ------------------~~~~i~~lp~g~d--t~vge~G~~LSgGQrQRiaiARA~~~--------------------- 581 (632)
+.+.+..+ |++ +.......+||||||||++||||+..
T Consensus 105 l~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~ 182 (287)
T PRK13637 105 IAFGPINLGLSEEEIENRVKRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDE 182 (287)
T ss_pred HHhHHHHCCCCHHHHHHHHHHHHHHc--CCCchhhccCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHH
Confidence 11112221 443 34556678999999999999999544
Q ss_pred ----------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhc
Q 047286 582 ----------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMK 616 (632)
Q Consensus 582 ----------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~ 616 (632)
+++||.+..+ +.||+|++|++|++++.|+.+++.+
T Consensus 183 l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 183 ILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 7789999987 5699999999999999999999875
No 462
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=99.71 E-value=3.1e-17 Score=173.29 Aligned_cols=117 Identities=26% Similarity=0.287 Sum_probs=87.4
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc-------H-HHH---------------------HH-
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI-------Y-SWI---------------------II- 541 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~-------~-~~~---------------------~~- 541 (632)
+|.-+++++|+||||||||||+++|.|+++|++ +. . ... +.
T Consensus 19 ~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~ 98 (354)
T TIGR02142 19 TLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSVRGNLRY 98 (354)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcHHHHHHH
Confidence 344456899999999999999999999988743 00 0 000 00
Q ss_pred ------------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------------
Q 047286 542 ------------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------------- 581 (632)
Q Consensus 542 ------------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------------- 581 (632)
.+.+.+..+ |++........+||||||||++||||+..
T Consensus 99 ~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~ 176 (354)
T TIGR02142 99 GMKRARPSERRISFERVIELL--GIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLER 176 (354)
T ss_pred HhhccChhHHHHHHHHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHH
Confidence 012223322 45555566678999999999999999554
Q ss_pred ---------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCC
Q 047286 582 ---------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITD 619 (632)
Q Consensus 582 ---------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~ 619 (632)
+++||.+..+. .||+|++|++|+|++.|+++++...++
T Consensus 177 l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 224 (354)
T TIGR02142 177 LHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPD 224 (354)
T ss_pred HHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcC
Confidence 78899999875 599999999999999999999987643
No 463
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.71 E-value=5.4e-17 Score=162.23 Aligned_cols=69 Identities=23% Similarity=0.213 Sum_probs=58.9
Q ss_pred ccccCCCCCChHHHHHHHHHHHHhh-------------------------------------hccccchhhhh-cCCEEE
Q 047286 557 NVGERGLQLSGGLKQRIARTRARNY-------------------------------------CGCGSPPYHYK-NADITS 598 (632)
Q Consensus 557 ~vge~G~~LSgGQrQRiaiARA~~~-------------------------------------~~iahrl~~~~-~aD~I~ 598 (632)
.+..-..+||||||||+.||=|+.. +.|||.+..+. -||+|+
T Consensus 146 ~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~ 225 (316)
T COG0444 146 RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVA 225 (316)
T ss_pred HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEE
Confidence 4556678999999999999999433 89999999884 799999
Q ss_pred EEeCCeEeeecChHHHhccCCchhHHH
Q 047286 599 VVKNGVIAEKGRHDALMKITDGTYASL 625 (632)
Q Consensus 599 vl~~G~ive~G~h~eL~~~~~g~y~~l 625 (632)
||.+|+|||+|+-+++.+++.-.|.+.
T Consensus 226 VMYaG~iVE~g~~~~i~~~P~HPYT~~ 252 (316)
T COG0444 226 VMYAGRIVEEGPVEEIFKNPKHPYTRG 252 (316)
T ss_pred EEECcEEEEeCCHHHHhcCCCChHHHH
Confidence 999999999999999998866566543
No 464
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.71 E-value=1.9e-17 Score=162.94 Aligned_cols=120 Identities=24% Similarity=0.231 Sum_probs=86.5
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc--H-HHHHH-----------------HHHHHHh
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI--Y-SWIII-----------------KCTNFIA 548 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~--~-~~~~~-----------------~~~~~i~ 548 (632)
..-+|+-++.++|+|+||||||||+++|.|++.|+. .. . ...+. ...+.|.
T Consensus 23 v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~eva 102 (235)
T COG1122 23 VSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVA 102 (235)
T ss_pred eEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcHHHHHh
Confidence 334555566999999999999999999999998864 00 0 00000 0001111
Q ss_pred cCC--------------------CccCcccccCCCCCChHHHHHHHHHHHHhh---------------------------
Q 047286 549 SLP--------------------QGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------------- 581 (632)
Q Consensus 549 ~lp--------------------~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------------- 581 (632)
--| -|+.........+||||||||+|||-++..
T Consensus 103 fg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~ 182 (235)
T COG1122 103 FGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLK 182 (235)
T ss_pred hchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 101 033333445667999999999999999432
Q ss_pred ----------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ----------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ----------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
|++||++..+.. ||+++||++|+++.+|+++|+.+.
T Consensus 183 ~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 183 KLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 788999999987 999999999999999999999875
No 465
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.71 E-value=2.1e-17 Score=161.49 Aligned_cols=107 Identities=28% Similarity=0.270 Sum_probs=86.6
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh--------------------------------cHHH--H---H
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV--------------------------------IYSW--I---I 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~--------------------------------~~~~--~---~ 540 (632)
++-+|.-++.++|+||+|||||||+++|.|+++|++. .... . .
T Consensus 24 ~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~ 103 (204)
T cd03250 24 INLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKA 103 (204)
T ss_pred eeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHH
Confidence 3334555669999999999999999999999887430 0000 0 1
Q ss_pred HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------------------hc
Q 047286 541 IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------------------CG 583 (632)
Q Consensus 541 ~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------------------~~ 583 (632)
..+.+++..+|.|+++.+.+.+.+||+|||||++||||+.. ++
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~ 183 (204)
T cd03250 104 CALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRIL 183 (204)
T ss_pred cCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEE
Confidence 13457888999999999999999999999999999999443 77
Q ss_pred cccchhhhhcCCEEEEEeCCe
Q 047286 584 CGSPPYHYKNADITSVVKNGV 604 (632)
Q Consensus 584 iahrl~~~~~aD~I~vl~~G~ 604 (632)
+||+++.++.||+|++|++|+
T Consensus 184 ~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 184 VTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EeCCHHHHhhCCEEEEEeCCC
Confidence 899999998899999999985
No 466
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.70 E-value=4.1e-17 Score=167.76 Aligned_cols=120 Identities=18% Similarity=0.208 Sum_probs=87.4
Q ss_pred CcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc-------HHHH--------------------
Q 047286 496 STVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI-------YSWI-------------------- 539 (632)
Q Consensus 496 ~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~-------~~~~-------------------- 539 (632)
.+++.+|.-++++||+||+|||||||+++|.|++.|++ +. ....
T Consensus 23 ~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv 102 (288)
T PRK13643 23 FDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFEETV 102 (288)
T ss_pred eeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHHHHhhEEEEecCcchhcccchH
Confidence 34445666677999999999999999999999988743 10 0000
Q ss_pred HHH------------------HHHHHhcCCCccC-cccccCCCCCChHHHHHHHHHHHHhh-------------------
Q 047286 540 IIK------------------CTNFIASLPQGSD-LNVGERGLQLSGGLKQRIARTRARNY------------------- 581 (632)
Q Consensus 540 ~~~------------------~~~~i~~lp~g~d-t~vge~G~~LSgGQrQRiaiARA~~~------------------- 581 (632)
..+ +.+.+..+ |++ ........+||||||||++||||+..
T Consensus 103 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~ 180 (288)
T PRK13643 103 LKDVAFGPQNFGIPKEKAEKIAAEKLEMV--GLADEFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKAR 180 (288)
T ss_pred HHHHHhHHHHcCCCHHHHHHHHHHHHHHc--CCChhhccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHH
Confidence 000 11112211 342 22355667899999999999999554
Q ss_pred -----------------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -----------------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -----------------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.+..+ +.||+|++|++|+|++.|+++++..+
T Consensus 181 ~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 181 IEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 7889999977 56999999999999999999998763
No 467
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.70 E-value=4.5e-17 Score=166.05 Aligned_cols=118 Identities=20% Similarity=0.240 Sum_probs=86.0
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cHHHH-------------------HH-----
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IYSWI-------------------II----- 541 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~~~~-------------------~~----- 541 (632)
+.-+|.-++++||+||+|||||||+++|.|+++|++ + ..... +.
T Consensus 28 isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~ 107 (269)
T PRK13648 28 VSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAF 107 (269)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccccHHHHHHh
Confidence 334555667999999999999999999999988743 0 00000 00
Q ss_pred --------------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 542 --------------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 542 --------------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
.+.+.+..+ |+.........+||||||||++||||++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L 185 (269)
T PRK13648 108 GLENHAVPYDEMHRRVSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLV 185 (269)
T ss_pred hHHhcCCCHHHHHHHHHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 001111111 23223344567899999999999999554
Q ss_pred -----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+..||+|++|++|+|++.|+++++...
T Consensus 186 ~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 186 RKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 688999998888999999999999999999999874
No 468
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.70 E-value=3e-17 Score=161.47 Aligned_cols=110 Identities=24% Similarity=0.265 Sum_probs=79.6
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------cH--HHH---------------------H-----
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------IY--SWI---------------------I----- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~~--~~~---------------------~----- 540 (632)
+.-+|.-++++||+||+|||||||+++|.|+++|++. .. ... +
T Consensus 19 vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~ 98 (213)
T cd03259 19 LSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAENIAFGLK 98 (213)
T ss_pred eeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHHHHHHhHHH
Confidence 3335555678999999999999999999999877430 00 000 0
Q ss_pred ----------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------------
Q 047286 541 ----------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------------- 581 (632)
Q Consensus 541 ----------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------------- 581 (632)
..+.+++..+ |++........+||||||||++||||+..
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~ 176 (213)
T cd03259 99 LRGVPKAEIRARVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKEL 176 (213)
T ss_pred HcCCCHHHHHHHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHH
Confidence 0122333333 45444555667899999999999999554
Q ss_pred --------hccccchhhhh-cCCEEEEEeCCeEeeec
Q 047286 582 --------CGCGSPPYHYK-NADITSVVKNGVIAEKG 609 (632)
Q Consensus 582 --------~~iahrl~~~~-~aD~I~vl~~G~ive~G 609 (632)
+++||+++.+. .||+|++|++|++++.|
T Consensus 177 ~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 177 QRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 68899998764 59999999999999876
No 469
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.70 E-value=4e-17 Score=166.97 Aligned_cols=118 Identities=21% Similarity=0.162 Sum_probs=86.6
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------c---HHHH--------------------HHHH--
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------I---YSWI--------------------IIKC-- 543 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~---~~~~--------------------~~~~-- 543 (632)
+.-+|.-++++||+|++|||||||+++|.|+++|++. . .... ..++
T Consensus 26 v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~ 105 (277)
T PRK13642 26 VSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAF 105 (277)
T ss_pred eEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccCCHHHHHHh
Confidence 3345666679999999999999999999999887430 0 0000 0001
Q ss_pred ----------------HHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 544 ----------------TNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 544 ----------------~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
.+.+..+ |++.........||||||||++||||+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l 183 (277)
T PRK13642 106 GMENQGIPREEMIKRVDEALLAV--NMLDFKTREPARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVI 183 (277)
T ss_pred hHHHcCCCHHHHHHHHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 0111111 33333444567899999999999999554
Q ss_pred -----------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -----------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -----------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+..||+|++|++|++++.|+++++++.
T Consensus 184 ~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 184 HEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 788999999989999999999999999999999875
No 470
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.70 E-value=3e-17 Score=155.25 Aligned_cols=128 Identities=17% Similarity=0.139 Sum_probs=84.3
Q ss_pred EEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcHHh---hcceEEEcccCcccccccccccccccCCCCCCHHHHHHH
Q 047286 87 LQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPEAE---QEKIGLVSKEPIFLFCDFNEGQYIPYGKQNASDEHIRPA 163 (632)
Q Consensus 87 ~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~~~---r~~i~~v~Q~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (632)
++++++||+++|+||||||||||+++|.|+...+..++ ...++|++|++. +.- .++.+-.
T Consensus 19 ~~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~q~~~-----------LSg------Gq~qrv~ 81 (177)
T cd03222 19 LGVVKEGEVIGIVGPNGTGKTTAVKILAGQLIPNGDNDEWDGITPVYKPQYID-----------LSG------GELQRVA 81 (177)
T ss_pred CcEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCcEEEECCEEEEEEcccCC-----------CCH------HHHHHHH
Confidence 37899999999999999999999999996533222111 124677777642 000 1110111
Q ss_pred HHHccchhhHhhCCcccccccccCCCCHHHHHHHHHHHHHHh-CC-ceEEEEecCchHHhh-cCeEEEEeCCeEEE
Q 047286 164 VQLANAEKSIDKLPLGLDTVVATNAVDAQSERIVQAAMVKLV-TN-QTVVIVANCLITIRN-ADCIIMVSKGKIVE 236 (632)
Q Consensus 164 ~~~~~l~~~i~~l~~g~~~~v~ts~LD~~~~~~i~~~l~~~~-~~-~tviiitH~~~~~~~-aD~i~vl~~G~i~~ 236 (632)
+..+ +..-|.=+-.-=+|++||+.+++.+.+.++++. ++ .|+|++||++..+.. ||++++|+++-.+.
T Consensus 82 lara-----l~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~~~~~~ 152 (177)
T cd03222 82 IAAA-----LLRNATFYLFDEPSAYLDIEQRLNAARAIRRLSEEGKKTALVVEHDLAVLDYLSDRIHVFEGEPGVY 152 (177)
T ss_pred HHHH-----HhcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHhCCEEEEEcCCCccc
Confidence 1111 111111000001489999999999999999875 33 899999999998875 99999999876553
No 471
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=99.70 E-value=4.8e-17 Score=165.74 Aligned_cols=128 Identities=23% Similarity=0.211 Sum_probs=87.6
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc---HH---HHHH---------------HHHHHHh-
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI---YS---WIII---------------KCTNFIA- 548 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---~~---~~~~---------------~~~~~i~- 548 (632)
-+|.-++++||+||+|||||||+++|.|+++|++ +. .. .... .+.+.+.
T Consensus 28 l~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~ 107 (269)
T PRK11831 28 LTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAY 107 (269)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCCHHHHHHH
Confidence 3455556999999999999999999999988743 10 00 0000 0001110
Q ss_pred ---c---CC--------------CccCcccccCCCCCChHHHHHHHHHHHHhh---------------------------
Q 047286 549 ---S---LP--------------QGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------------- 581 (632)
Q Consensus 549 ---~---lp--------------~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------------- 581 (632)
. ++ -|++........+||||||||++||||++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 187 (269)
T PRK11831 108 PLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLIS 187 (269)
T ss_pred HHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHH
Confidence 0 00 022222233446899999999999999654
Q ss_pred ----------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhHHHHH
Q 047286 582 ----------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYASLTA 627 (632)
Q Consensus 582 ----------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~ 627 (632)
+++||.+..+. .||+|++|++|+|++.|+++++++.....++.++.
T Consensus 188 ~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~ 244 (269)
T PRK11831 188 ELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPDPRVRQFLD 244 (269)
T ss_pred HHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCcHHHHHHHH
Confidence 68899998875 59999999999999999999998753344555554
No 472
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.70 E-value=4.3e-17 Score=166.46 Aligned_cols=120 Identities=20% Similarity=0.227 Sum_probs=89.2
Q ss_pred CcccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---c-HHHH-------------------H-H-
Q 047286 496 STVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---I-YSWI-------------------I-I- 541 (632)
Q Consensus 496 ~~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~-~~~~-------------------~-~- 541 (632)
.+++-+|.-++++||+||+|||||||+++|+|+++|++ + . .... + .
T Consensus 19 ~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~en 98 (274)
T PRK13644 19 ENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVEED 98 (274)
T ss_pred eeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHHHH
Confidence 34444666677999999999999999999999987743 0 0 0000 0 0
Q ss_pred -----------------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 542 -----------------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 542 -----------------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
.+.+.+..+ |++.........||||||||++||||+..
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~ 176 (274)
T PRK13644 99 LAFGPENLCLPPIEIRKRVDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVL 176 (274)
T ss_pred HHhhHHHcCCCHHHHHHHHHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 011122222 44444455678899999999999999554
Q ss_pred -------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.+..+..||+|++|++|++++.|+.+++...
T Consensus 177 ~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 177 ERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 788999999999999999999999999999998764
No 473
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=99.70 E-value=4e-17 Score=169.01 Aligned_cols=116 Identities=22% Similarity=0.289 Sum_probs=86.1
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------cH--HHH----------------------H----
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------IY--SWI----------------------I---- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~~--~~~----------------------~---- 540 (632)
++-+|+-++++||+||+|||||||+++|+|++.|++. .. ... +
T Consensus 26 vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~ 105 (306)
T PRK13537 26 LSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFG 105 (306)
T ss_pred ceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHH
Confidence 3335555678999999999999999999999887540 00 000 0
Q ss_pred -----------HHHHHHHh--cCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 541 -----------IKCTNFIA--SLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 541 -----------~~~~~~i~--~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
..+.+.+. .|++..++.++ +||||||||++||||++.
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l 181 (306)
T PRK13537 106 RYFGLSAAAARALVPPLLEFAKLENKADAKVG----ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERL 181 (306)
T ss_pred HHcCCCHHHHHHHHHHHHHHcCCchHhcCchh----hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHH
Confidence 01112222 24445555554 799999999999999654
Q ss_pred ----------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ----------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ----------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.++.+. .||+|++|++|+|++.|+.+++.+.
T Consensus 182 ~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 182 RSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 67799999885 5999999999999999999999764
No 474
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.70 E-value=2.1e-17 Score=166.25 Aligned_cols=149 Identities=17% Similarity=0.153 Sum_probs=106.5
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC------------------cH-------Hhh---cceEEEcccCcc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA------------------PE-------AEQ---EKIGLVSKEPIF 137 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~------------------~~-------~~r---~~i~~v~Q~~~~ 137 (632)
+++ +++|++++|+||||||||||+++|+|+.... .. ..+ ..++|++|++..
T Consensus 20 i~~-i~~Ge~~~IvG~nGsGKSTLlk~l~Gl~~p~~G~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ 98 (255)
T cd03236 20 LPV-PREGQVLGLVGPNGIGKSTALKILAGKLKPNLGKFDDPPDWDEILDEFRGSELQNYFTKLLEGDVKVIVKPQYVDL 98 (255)
T ss_pred CCC-CCCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEeeccccchhhhhccCchhhhhhHHhhhcccceeeecchhcc
Confidence 664 8999999999999999999999998653210 00 011 136788887654
Q ss_pred cccccccccccccC-CCCCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHH
Q 047286 138 LFCDFNEGQYIPYG-KQNASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSER 195 (632)
Q Consensus 138 ~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~ 195 (632)
+..++.. ++... ......+++.++++..++.+ ....+|.|..+++ +|++||+.+++
T Consensus 99 ~~~~~~~--~i~~~l~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPts~LD~~~~~ 176 (255)
T cd03236 99 IPKAVKG--KVGELLKKKDERGKLDELVDQLELRHVLDRNIDQLSGGELQRVAIAAALARDADFYFFDEPSSYLDIKQRL 176 (255)
T ss_pred CchHHHH--HHHHHhchhHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEECCCCCCCHHHHH
Confidence 4422222 22221 11112356777888887654 4567888988777 39999999999
Q ss_pred HHHHHHHHHhC-CceEEEEecCchHHhh-cCeEEEEeCCeEEEec
Q 047286 196 IVQAAMVKLVT-NQTVVIVANCLITIRN-ADCIIMVSKGKIVEKG 238 (632)
Q Consensus 196 ~i~~~l~~~~~-~~tviiitH~~~~~~~-aD~i~vl~~G~i~~~g 238 (632)
.+.+.++++.+ ++|+|++||+++.+.. ||+|++| +|++.+.|
T Consensus 177 ~l~~~l~~l~~~~~tIIiiSHd~~~~~~~ad~i~~l-~~~~~~~~ 220 (255)
T cd03236 177 NAARLIRELAEDDNYVLVVEHDLAVLDYLSDYIHCL-YGEPGAYG 220 (255)
T ss_pred HHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE-CCCCCcce
Confidence 99999998864 7899999999998875 9999999 46676544
No 475
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.70 E-value=7e-16 Score=176.94 Aligned_cols=160 Identities=15% Similarity=0.242 Sum_probs=113.9
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCC----------CC---cH--HhhcceEEEcccCcccccccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRF----------YA---PE--AEQEKIGLVSKEPIFLFCDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~----------~~---~~--~~r~~i~~v~Q~~~~~~~~~~~~~~i~ 149 (632)
+++.-+++|+.+.++||.|||||||++.+.|... |+ .. .-++.++|.+|+...+ +.++..+-+.
T Consensus 133 ~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~-p~lTVreTld 211 (1391)
T KOG0065|consen 133 DISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHF-PELTVRETLD 211 (1391)
T ss_pred CcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEecccccccc-ceeEEeehhh
Confidence 4888999999999999999999999999975321 00 00 1257799999987543 3333332333
Q ss_pred cCC---------CCCCHHH-----HHHHHHHccch---------hhHhhCCcccccccc-----------------cCCC
Q 047286 150 YGK---------QNASDEH-----IRPAVQLANAE---------KSIDKLPLGLDTVVA-----------------TNAV 189 (632)
Q Consensus 150 ~~~---------~~~~~~~-----~~~~~~~~~l~---------~~i~~l~~g~~~~v~-----------------ts~L 189 (632)
+.. ++.++++ .+.+++..|++ +.++..++|.+.+|. |.||
T Consensus 212 Fa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 212 FAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred HHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 311 1122222 22455555553 456778889988873 7899
Q ss_pred CHHHHHHHHHHHHHHhC--CceEEEEecCc--hHHhhcCeEEEEeCCeEEEecChhHHhc
Q 047286 190 DAQSERIVQAAMVKLVT--NQTVVIVANCL--ITIRNADCIIMVSKGKIVEKGTHDELIE 245 (632)
Q Consensus 190 D~~~~~~i~~~l~~~~~--~~tviiitH~~--~~~~~aD~i~vl~~G~i~~~g~~~el~~ 245 (632)
|..+.-++.++|+++.+ +.|.++.-++. +.....|.|++|.+|+++.+|+.++.+.
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~ 351 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLP 351 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHH
Confidence 99999999999999854 56777776765 3456699999999999999999998753
No 476
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.70 E-value=5.5e-17 Score=162.02 Aligned_cols=115 Identities=23% Similarity=0.265 Sum_probs=85.1
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHHH--------------------H--------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSWI--------------------I-------- 540 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~~--------------------~-------- 540 (632)
+|.-++++||+||+|||||||+++|.|+++|++- +.... +
T Consensus 21 ~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~ 100 (235)
T cd03299 21 EVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKRK 100 (235)
T ss_pred EEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHHHHHHHHHcC
Confidence 4445569999999999999999999999887430 00000 0
Q ss_pred -------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------------
Q 047286 541 -------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------------- 581 (632)
Q Consensus 541 -------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------------- 581 (632)
..+.+.+..+ |+.-.+.....+||||||||++||||+..
T Consensus 101 ~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~ 178 (235)
T cd03299 101 VDKKEIERKVLEIAEML--GIDHLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKE 178 (235)
T ss_pred CCHHHHHHHHHHHHHHc--CChhHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHh
Confidence 0111222222 34333455567899999999999999554
Q ss_pred -----hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -----CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -----~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+. .||+|++|++|++++.|+++++++.
T Consensus 179 ~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 179 FGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 67899999876 5999999999999999999999875
No 477
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.70 E-value=4.6e-17 Score=166.79 Aligned_cols=118 Identities=21% Similarity=0.172 Sum_probs=87.3
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hcH----HHH-------------------HH-H--
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VIY----SWI-------------------II-K-- 542 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~~----~~~-------------------~~-~-- 542 (632)
+.-+|.-++++||+|++|||||||+++|.|++.|++ +.. ... +. +
T Consensus 29 vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~ 108 (280)
T PRK13633 29 VNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVA 108 (280)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHHhhheEEEecChhhhhccccHHHHHH
Confidence 334555567999999999999999999999988743 100 000 00 0
Q ss_pred ----------------HHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 543 ----------------CTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 543 ----------------~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
+.+.+.. -|+.........+||||||||++||||+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~--~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~ 186 (280)
T PRK13633 109 FGPENLGIPPEEIRERVDESLKK--VGMYEYRRHAPHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNT 186 (280)
T ss_pred hhHhhcCCCHHHHHHHHHHHHHH--CCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 0011111 144444455667999999999999999554
Q ss_pred ------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||+++.+..||+|++|++|+|++.|+++++.+.
T Consensus 187 l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 187 IKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 678999999988999999999999999999999864
No 478
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=99.70 E-value=6.3e-17 Score=163.28 Aligned_cols=128 Identities=22% Similarity=0.261 Sum_probs=90.6
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------c-----------HHHH------------------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------I-----------YSWI------------------ 539 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~-----------~~~~------------------ 539 (632)
+.-+|.-++++||+||+|||||||+++|.|++.|++. . ....
T Consensus 22 vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (250)
T PRK11264 22 IDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRT 101 (250)
T ss_pred ceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcccCCCCC
Confidence 3345566679999999999999999999999876431 0 0000
Q ss_pred -HHH-------------------HHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------
Q 047286 540 -IIK-------------------CTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------ 581 (632)
Q Consensus 540 -~~~-------------------~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------ 581 (632)
..+ +.+.+..+ |++........+||||||||++||||+..
T Consensus 102 v~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~ 179 (250)
T PRK11264 102 VLENIIEGPVIVKGEPKEEATARARELLAKV--GLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPEL 179 (250)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCcchhhCChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHH
Confidence 000 11122222 44444455678899999999999999654
Q ss_pred ------------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCC-chhHHHHH
Q 047286 582 ------------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITD-GTYASLTA 627 (632)
Q Consensus 582 ------------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~-g~y~~l~~ 627 (632)
+++||++..+. .||+|++|++|++++.|+++++.+.+. ...+.++.
T Consensus 180 ~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~~ 245 (250)
T PRK11264 180 VGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFADPQQPRTRQFLE 245 (250)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCCCCHHHHHHHH
Confidence 68899999885 599999999999999999999976422 23344444
No 479
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=99.70 E-value=4e-17 Score=169.16 Aligned_cols=116 Identities=24% Similarity=0.277 Sum_probs=84.1
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------c--HHHH----------------------HH---
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------I--YSWI----------------------II--- 541 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~--~~~~----------------------~~--- 541 (632)
+.-+|.-++++||+||+|||||||+++|.|++.|++. . .... +.
T Consensus 23 vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~ 102 (303)
T TIGR01288 23 LSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTVRENLLVFG 102 (303)
T ss_pred eeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcHHHHHHHHH
Confidence 3345566679999999999999999999999877430 0 0000 00
Q ss_pred ------------HHHHHHh--cCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 542 ------------KCTNFIA--SLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 542 ------------~~~~~i~--~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
.+.+.+. .+++.+++ ...+||||||||++||||+..
T Consensus 103 ~~~~~~~~~~~~~~~~ll~~~~l~~~~~~----~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l 178 (303)
T TIGR01288 103 RYFGMSTREIEAVIPSLLEFARLESKADV----RVALLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERL 178 (303)
T ss_pred HHcCCCHHHHHHHHHHHHHHCCChhHhcC----chhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHH
Confidence 0111111 22233333 345799999999999999654
Q ss_pred ----------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ----------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ----------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.++.+. .||+|++|++|++++.|+++++.+.
T Consensus 179 ~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 179 RSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 78899999885 5999999999999999999999764
No 480
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.70 E-value=3.1e-17 Score=159.00 Aligned_cols=140 Identities=11% Similarity=0.170 Sum_probs=104.7
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCCcH----------H-hhcceEEEcccCccc-ccccccccccccCCC
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYAPE----------A-EQEKIGLVSKEPIFL-FCDFNEGQYIPYGKQ 153 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~~~----------~-~r~~i~~v~Q~~~~~-~~~~~~~~~i~~~~~ 153 (632)
+||++++||+++|+||||||||||+++|+|....... . .++.++|++|++.++ ..++.+ |+.+...
T Consensus 19 vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~tv~~--~l~~~~~ 96 (195)
T PRK13541 19 LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIAKPYCTYIGHNLGLKLEMTVFE--NLKFWSE 96 (195)
T ss_pred EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhhhhhEEeccCCcCCCccCCHHH--HHHHHHH
Confidence 8999999999999999999999999999865321110 0 134589999987543 345554 5654321
Q ss_pred C-CCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHH-hCCceE
Q 047286 154 N-ASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKL-VTNQTV 210 (632)
Q Consensus 154 ~-~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~-~~~~tv 210 (632)
. ...+++.++++.+++.+ ....+|.|..+++ +|++||+.+++.+.+.+++. .++.|+
T Consensus 97 ~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rl~la~al~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~ti 176 (195)
T PRK13541 97 IYNSAETLYAAIHYFKLHDLLDEKCYSLSSGMQKIVAIARLIACQSDLWLLDEVETNLSKENRDLLNNLIVMKANSGGIV 176 (195)
T ss_pred hcccHHHHHHHHHHcCCHhhhccChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEE
Confidence 1 13456677777777654 4667889988777 38999999999999999765 357899
Q ss_pred EEEecCchHHhhcCeEE
Q 047286 211 VIVANCLITIRNADCII 227 (632)
Q Consensus 211 iiitH~~~~~~~aD~i~ 227 (632)
|++||+...++.||.+.
T Consensus 177 ii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 177 LLSSHLESSIKSAQILQ 193 (195)
T ss_pred EEEeCCccccchhheec
Confidence 99999999999888763
No 481
>COG1101 PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.70 E-value=3.9e-17 Score=152.46 Aligned_cols=155 Identities=19% Similarity=0.264 Sum_probs=110.5
Q ss_pred EEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC---------------cHHhhcceEEEcccCccc-ccccccccccc
Q 047286 86 FLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA---------------PEAEQEKIGLVSKEPIFL-FCDFNEGQYIP 149 (632)
Q Consensus 86 ~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~---------------~~~~r~~i~~v~Q~~~~~-~~~~~~~~~i~ 149 (632)
++++|++|+++.|+|.||||||||++.|.|....+ .......++-|+|+|..- .+.++..+|+.
T Consensus 25 ~sL~I~~g~FvtViGsNGAGKSTlln~iaG~l~~t~G~I~Idg~dVtk~~~~~RA~~larVfQdp~~gt~~~lTieENl~ 104 (263)
T COG1101 25 LSLEIAEGDFVTVIGSNGAGKSTLLNAIAGDLKPTSGQILIDGVDVTKKSVAKRANLLARVFQDPLAGTAPELTIEENLA 104 (263)
T ss_pred CceeecCCceEEEEcCCCccHHHHHHHhhCccccCCceEEECceecccCCHHHHhhHHHHHhcchhhCCcccccHHHHHH
Confidence 99999999999999999999999999998542221 111234588899999531 12333334654
Q ss_pred cCCCC------------CCHHHHHHHHHHcc------chhhHhhCCcccccccc-----------------cCCCCHHHH
Q 047286 150 YGKQN------------ASDEHIRPAVQLAN------AEKSIDKLPLGLDTVVA-----------------TNAVDAQSE 194 (632)
Q Consensus 150 ~~~~~------------~~~~~~~~~~~~~~------l~~~i~~l~~g~~~~v~-----------------ts~LD~~~~ 194 (632)
+.... ...+..++.+...+ +++.+..||+|+++.+. |++|||++.
T Consensus 105 la~~Rg~~rgl~~~ln~~~~~~f~~~l~~l~lgLenrL~~~iglLSGGQRQalsL~MAtl~~pkiLLLDEHTAALDPkta 184 (263)
T COG1101 105 LAESRGKKRGLSSALNERRRSSFRERLARLGLGLENRLSDRIGLLSGGQRQALSLLMATLHPPKILLLDEHTAALDPKTA 184 (263)
T ss_pred HHHhcCcccccchhhhHHHHHHHHHHHhhcccchhhhhcChhhhccchHHHHHHHHHHhcCCCcEEEecchhhcCCcchH
Confidence 32110 11122333344332 45667889999887663 899999999
Q ss_pred HHHHHHHHHHhC--CceEEEEecCchHH-hhcCeEEEEeCCeEEEecCh
Q 047286 195 RIVQAAMVKLVT--NQTVVIVANCLITI-RNADCIIMVSKGKIVEKGTH 240 (632)
Q Consensus 195 ~~i~~~l~~~~~--~~tviiitH~~~~~-~~aD~i~vl~~G~i~~~g~~ 240 (632)
..+++.-.++.+ +-|.+||||+++.+ .+.+|.++|++|+|+.+-+-
T Consensus 185 ~~vm~lT~kiV~~~klTtlMVTHnm~~Al~yG~RlImLh~G~IvlDv~g 233 (263)
T COG1101 185 EFVMELTAKIVEEHKLTTLMVTHNMEDALDYGNRLIMLHSGKIVLDVTG 233 (263)
T ss_pred HHHHHHHHHHHHhcCCceEEEeccHHHHHhhCCeEEEEeCCeEEEEccc
Confidence 999998888743 56999999999765 66999999999999976443
No 482
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.70 E-value=7.7e-17 Score=153.52 Aligned_cols=126 Identities=23% Similarity=0.310 Sum_probs=89.7
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH--HH--------------------HHH--
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI--II--------------------KCT-- 544 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~--~~--------------------~~~-- 544 (632)
+|.-++.+||+||||||||||++++.|+..|++ +....+ +. |..
T Consensus 30 ~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafp 109 (263)
T COG1127 30 DVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFP 109 (263)
T ss_pred eecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccccchhHhhhee
Confidence 455556789999999999999999999999865 111100 00 000
Q ss_pred --HHHhcCC--------------CccCcccc-cCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 545 --NFIASLP--------------QGSDLNVG-ERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 545 --~~i~~lp--------------~g~dt~vg-e~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
+. ..|| -|+...+. --.+.||||.|.|.|||||+-.
T Consensus 110 lre~-~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI 188 (263)
T COG1127 110 LREH-TKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELI 188 (263)
T ss_pred hHhh-ccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHH
Confidence 00 0111 13433322 2346899999999999999422
Q ss_pred -----------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhccCCchhHHHHH
Q 047286 582 -----------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKITDGTYASLTA 627 (632)
Q Consensus 582 -----------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~~ 627 (632)
+++||.++++.. ||+|+++.||+|+-+||.+||.+..+.+-+++++
T Consensus 189 ~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~P~v~qf~~ 246 (263)
T COG1127 189 RELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDDPWVRQFFN 246 (263)
T ss_pred HHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCCHHHHHHhc
Confidence 799999988864 7999999999999999999999975555666654
No 483
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.70 E-value=6.7e-17 Score=163.45 Aligned_cols=125 Identities=23% Similarity=0.263 Sum_probs=86.4
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChh-----h---------hc-----HHHH-----------------HH
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPE-----Q---------VI-----YSWI-----------------II 541 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~-----~---------~~-----~~~~-----------------~~ 541 (632)
+.-+|.-++++||+|+||||||||+++|.|+++|+ + +. .... +.
T Consensus 26 vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~tv~ 105 (254)
T PRK14273 26 INIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFLMSIY 105 (254)
T ss_pred eeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccccCcHH
Confidence 34456666799999999999999999999999862 1 10 0000 00
Q ss_pred -HH---------------HHHHh----c--CCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------
Q 047286 542 -KC---------------TNFIA----S--LPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------ 581 (632)
Q Consensus 542 -~~---------------~~~i~----~--lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------ 581 (632)
++ .+.+. . +..++.........+||||||||++||||++.
T Consensus 106 eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~ 185 (254)
T PRK14273 106 DNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPIS 185 (254)
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHH
Confidence 00 00111 0 10011112234567899999999999999654
Q ss_pred -----------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchh
Q 047286 582 -----------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTY 622 (632)
Q Consensus 582 -----------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y 622 (632)
++++|+++.+. .||+|++|++|+|++.|+++++.+.++-.|
T Consensus 186 ~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 244 (254)
T PRK14273 186 TGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFFNPKNTK 244 (254)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCChH
Confidence 67899999875 599999999999999999999986533333
No 484
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.70 E-value=6e-17 Score=159.33 Aligned_cols=125 Identities=20% Similarity=0.296 Sum_probs=91.2
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh------------hcHHHH-----------------------------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ------------VIYSWI----------------------------- 539 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~------------~~~~~~----------------------------- 539 (632)
+|.-++...|.|-||||||||++++.|+++|+. ++...+
T Consensus 50 ~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~f 129 (386)
T COG4175 50 DVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAF 129 (386)
T ss_pred eecCCeEEEEEecCCCCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhc
Confidence 455555679999999999999999999999964 111111
Q ss_pred ------------HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 540 ------------IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 540 ------------~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
...+.++++.. |++-.-.....+||||++||+.||||+-.
T Consensus 130 GLev~Gv~~~er~~~a~~~l~~V--gL~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeL 207 (386)
T COG4175 130 GLEVQGVPKAEREERALEALELV--GLEGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDEL 207 (386)
T ss_pred ceeecCCCHHHHHHHHHHHHHHc--CchhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHH
Confidence 01222333321 44444445567899999999999999322
Q ss_pred -----------hccccchh-hhhcCCEEEEEeCCeEeeecChHHHhccCCchh-HHHHH
Q 047286 582 -----------CGCGSPPY-HYKNADITSVVKNGVIAEKGRHDALMKITDGTY-ASLTA 627 (632)
Q Consensus 582 -----------~~iahrl~-~~~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y-~~l~~ 627 (632)
+.|||.|. .+|-.|||..|+||+||+.||++|.+.++-.-| +++++
T Consensus 208 l~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~Fv~ 266 (386)
T COG4175 208 LELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEILLNPANDYVRDFVR 266 (386)
T ss_pred HHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHHHcCccHHHHHHHHh
Confidence 78999986 568999999999999999999999998754444 44443
No 485
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.70 E-value=2.9e-17 Score=163.59 Aligned_cols=117 Identities=23% Similarity=0.189 Sum_probs=84.6
Q ss_pred cccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHH--H---------------------HH--
Q 047286 499 RGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSW--I---------------------II-- 541 (632)
Q Consensus 499 ~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~--~---------------------~~-- 541 (632)
.-+|.-++++||+||+|||||||+++|.|+++|++. .... . +.
T Consensus 20 s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~ 99 (230)
T TIGR03410 20 SLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVEENLLTG 99 (230)
T ss_pred eeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHH
Confidence 334555568999999999999999999999887430 0000 0 00
Q ss_pred ---------HHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------------
Q 047286 542 ---------KCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------------- 581 (632)
Q Consensus 542 ---------~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------------- 581 (632)
...+.+....++++........+||||||||++||||+..
T Consensus 100 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~ 179 (230)
T TIGR03410 100 LAALPRRSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRA 179 (230)
T ss_pred HHhcCcchHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH
Confidence 0111112222233334455667899999999999999554
Q ss_pred ------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHh
Q 047286 582 ------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALM 615 (632)
Q Consensus 582 ------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~ 615 (632)
+++||.+..+.. ||+|+++++|++++.|+++++.
T Consensus 180 ~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 180 EGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 688999998874 9999999999999999999984
No 486
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.70 E-value=6.5e-17 Score=163.81 Aligned_cols=115 Identities=21% Similarity=0.361 Sum_probs=86.1
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc----------------HHHH----------------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI----------------YSWI---------------- 539 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~----------------~~~~---------------- 539 (632)
+|.-++++||+|+||||||||+++|.|+++|++ +. ....
T Consensus 27 ~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 106 (257)
T PRK10619 27 QANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSH 106 (257)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccccchHHHHHhhceEEEecCcccCCC
Confidence 455556999999999999999999999987743 10 0000
Q ss_pred ---HHH-------------------HHHHHhcCCCccCccc-ccCCCCCChHHHHHHHHHHHHhh---------------
Q 047286 540 ---IIK-------------------CTNFIASLPQGSDLNV-GERGLQLSGGLKQRIARTRARNY--------------- 581 (632)
Q Consensus 540 ---~~~-------------------~~~~i~~lp~g~dt~v-ge~G~~LSgGQrQRiaiARA~~~--------------- 581 (632)
..+ +.+++..+ |+.... ......||||||||++||||++.
T Consensus 107 ~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 184 (257)
T PRK10619 107 MTVLENVMEAPIQVLGLSKQEARERAVKYLAKV--GIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALD 184 (257)
T ss_pred CcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc--CCChhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 001 11222222 444433 55677999999999999999654
Q ss_pred ---------------------hccccchhhhhc-CCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ---------------------CGCGSPPYHYKN-ADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ---------------------~~iahrl~~~~~-aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 185 ~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 242 (257)
T PRK10619 185 PELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQLFGN 242 (257)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhhhC
Confidence 788999999885 999999999999999999999864
No 487
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.70 E-value=5.7e-17 Score=166.31 Aligned_cols=117 Identities=20% Similarity=0.147 Sum_probs=86.2
Q ss_pred cccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc-----HHHH--------------------HHH--
Q 047286 499 RGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI-----YSWI--------------------IIK-- 542 (632)
Q Consensus 499 ~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~-----~~~~--------------------~~~-- 542 (632)
.-+|.-++++||+||+|||||||+++|+|+++|++ +. .... ..+
T Consensus 26 s~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~ 105 (283)
T PRK13636 26 NINIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVS 105 (283)
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhccccHHHHHH
Confidence 33555567999999999999999999999987743 10 0000 000
Q ss_pred ----------------HHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 543 ----------------CTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 543 ----------------~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
+.+.+..+ |++........+||||||||++||||++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~ 183 (283)
T PRK13636 106 FGAVNLKLPEDEVRKRVDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL 183 (283)
T ss_pred hHHHHcCCCHHHHHHHHHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH
Confidence 01111111 34334445678999999999999999654
Q ss_pred ------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.++.+. .||+|++|++|++++.|+++++++.
T Consensus 184 l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 184 LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 67899999986 6999999999999999999999874
No 488
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=99.70 E-value=4.7e-17 Score=163.28 Aligned_cols=118 Identities=17% Similarity=0.193 Sum_probs=87.4
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHH-H------------------H------
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSW-I------------------I------ 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~-~------------------~------ 540 (632)
.+-+|.-++++||+||+|||||||+++|.|++.|++. .... . +
T Consensus 22 ~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 101 (241)
T PRK10895 22 VSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMA 101 (241)
T ss_pred eeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCcHHHHHhh
Confidence 3345666679999999999999999999999877430 0000 0 0
Q ss_pred --------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 541 --------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 541 --------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
..+.+++..+ |++.........||||||||++||||+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~ 179 (241)
T PRK10895 102 VLQIRDDLSAEQREDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRI 179 (241)
T ss_pred hhhcccccCHHHHHHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH
Confidence 0122233333 45444556677899999999999999654
Q ss_pred -----------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -----------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -----------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+ +.||+|++|++|++++.|++++++..
T Consensus 180 l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 180 IEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred HHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 6889999766 56999999999999999999999863
No 489
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.69 E-value=6.3e-17 Score=162.45 Aligned_cols=116 Identities=22% Similarity=0.248 Sum_probs=86.6
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc---------HHHH-------------------HHH
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI---------YSWI-------------------IIK 542 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---------~~~~-------------------~~~ 542 (632)
-+|.-++++||+||||||||||+++|.|+++|++ +. .... ..+
T Consensus 23 l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~ 102 (242)
T PRK11124 23 LDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQN 102 (242)
T ss_pred eEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHHhheEEEecCccccCCCcHHHH
Confidence 3455567999999999999999999999987743 10 0000 001
Q ss_pred -------------------HHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 543 -------------------CTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 543 -------------------~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
+.+++..+ |++........+||||||||++||||+..
T Consensus 103 i~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l 180 (242)
T PRK11124 103 LIEAPCRVLGLSKDQALARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQI 180 (242)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHH
Confidence 11122222 55555566678999999999999999654
Q ss_pred --------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 --------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 --------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+. .||+|++|++|++++.|+++++.+.
T Consensus 181 ~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 231 (242)
T PRK11124 181 VSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQP 231 (242)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcCc
Confidence 68899999985 5999999999999999999998754
No 490
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.69 E-value=6.4e-17 Score=165.87 Aligned_cols=119 Identities=24% Similarity=0.253 Sum_probs=87.8
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh-----h-------c---HHHH-------------------H-H
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ-----V-------I---YSWI-------------------I-I 541 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~-----~-------~---~~~~-------------------~-~ 541 (632)
++.-+|.-++++||+||+|||||||+++|+|+++|++ + . .... + .
T Consensus 25 ~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e 104 (282)
T PRK13640 25 DISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGATVGD 104 (282)
T ss_pred eEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccCCHHH
Confidence 3444566667999999999999999999999998752 0 0 0000 0 0
Q ss_pred H------------------HHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------
Q 047286 542 K------------------CTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------- 581 (632)
Q Consensus 542 ~------------------~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------- 581 (632)
+ +.+.+..+ |++........+||||||||++||||+..
T Consensus 105 nl~~~~~~~~~~~~~~~~~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l 182 (282)
T PRK13640 105 DVAFGLENRAVPRPEMIKIVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQI 182 (282)
T ss_pred HHHhhHHhCCCCHHHHHHHHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHH
Confidence 0 11112211 34344455667999999999999999544
Q ss_pred ---------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ---------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ---------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||.++.+..||+|++|++|++++.|+++++++.
T Consensus 183 ~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 183 LKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 678999999999999999999999999999998763
No 491
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=99.69 E-value=5.8e-17 Score=157.52 Aligned_cols=141 Identities=12% Similarity=0.165 Sum_probs=103.1
Q ss_pred cEEEEeeCCCEEEEEcCCCchHHHHHHHHHhCCCCC--------------cHHhhcceEEEcccCcccc-cccccccccc
Q 047286 85 RFLQHVPSGTTVALVGQSGSGKSTVINLVESFRFYA--------------PEAEQEKIGLVSKEPIFLF-CDFNEGQYIP 149 (632)
Q Consensus 85 ~~~~~i~~Ge~~~ivG~sGsGKSTLl~ll~~~~~~~--------------~~~~r~~i~~v~Q~~~~~~-~~~~~~~~i~ 149 (632)
.+||++++|++++|+||||||||||+++|.|..... ....++.++|++|++.++. .++.+ |+.
T Consensus 18 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~--~l~ 95 (198)
T TIGR01189 18 GLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELSALE--NLH 95 (198)
T ss_pred eeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccchHHhhhheEEeccCcccccCCcHHH--HHH
Confidence 399999999999999999999999999998653211 1123467999999987654 34444 554
Q ss_pred cCCC--CCCHHHHHHHHHHccchh----hHhhCCccccccc-----------------ccCCCCHHHHHHHHHHHHHHh-
Q 047286 150 YGKQ--NASDEHIRPAVQLANAEK----SIDKLPLGLDTVV-----------------ATNAVDAQSERIVQAAMVKLV- 205 (632)
Q Consensus 150 ~~~~--~~~~~~~~~~~~~~~l~~----~i~~l~~g~~~~v-----------------~ts~LD~~~~~~i~~~l~~~~- 205 (632)
+... ....+++.++++..++.+ .+..||+|..+++ +|++||+.+++.+.+.|.++.
T Consensus 96 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~ 175 (198)
T TIGR01189 96 FWAAIHGGAQRTIEDALAAVGLTGFEDLPAAQLSAGQQRRLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLA 175 (198)
T ss_pred HHHHHcCCcHHHHHHHHHHcCCHHHhcCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh
Confidence 3211 112345777888877754 4567888988777 399999999999999999874
Q ss_pred CCceEEEEecCchHHhhcCeEEE
Q 047286 206 TNQTVVIVANCLITIRNADCIIM 228 (632)
Q Consensus 206 ~~~tviiitH~~~~~~~aD~i~v 228 (632)
++.|+|++||+...+ .|++++.
T Consensus 176 ~~~tii~~sH~~~~~-~~~~~~~ 197 (198)
T TIGR01189 176 RGGIVLLTTHQDLGL-VEARELR 197 (198)
T ss_pred CCCEEEEEEcccccc-cceEEee
Confidence 578999999988533 2466543
No 492
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.69 E-value=5.8e-17 Score=165.47 Aligned_cols=117 Identities=22% Similarity=0.189 Sum_probs=82.8
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc---HHHH--------------------HHHH-
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI---YSWI--------------------IIKC- 543 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~---~~~~--------------------~~~~- 543 (632)
+++-+|+-++++||+||||||||||+++|.|+++|++ +. .... ..++
T Consensus 23 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~ 102 (274)
T PRK13647 23 GLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVA 102 (274)
T ss_pred eEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHHHHHH
Confidence 3444566667999999999999999999999988743 00 0000 0000
Q ss_pred -----------------HHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 544 -----------------TNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 544 -----------------~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
.+.+..+ |+.-........||||||||++||||+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~--~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~ 180 (274)
T PRK13647 103 FGPVNMGLDKDEVERRVEEALKAV--RMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEI 180 (274)
T ss_pred hhHHHcCCCHHHHHHHHHHHHHHC--CCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH
Confidence 1111111 22222333456899999999999999554
Q ss_pred -----------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHh
Q 047286 582 -----------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALM 615 (632)
Q Consensus 582 -----------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~ 615 (632)
+++||+++.+ +.||+|++|++|+|++.|+.+++.
T Consensus 181 l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 181 LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 7889999988 569999999999999999987654
No 493
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.69 E-value=6.4e-17 Score=165.02 Aligned_cols=119 Identities=23% Similarity=0.270 Sum_probs=87.8
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cHHHH--------------------HHH--
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IYSWI--------------------IIK-- 542 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~~~~--------------------~~~-- 542 (632)
++..+|.-++.+||+||+|||||||+++|.|+++|++ + ..... ..+
T Consensus 27 ~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~ 106 (271)
T PRK13632 27 NVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVEDDIA 106 (271)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHHHHHH
Confidence 3334555567999999999999999999999987743 0 00000 000
Q ss_pred ----------------HHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-------------------------
Q 047286 543 ----------------CTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------- 581 (632)
Q Consensus 543 ----------------~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------- 581 (632)
+.+.+..+ |++........+||||||||++||||+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~ 184 (271)
T PRK13632 107 FGLENKKVPPKKMKDIIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKI 184 (271)
T ss_pred hHHHHcCCCHHHHHHHHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 11112222 44444556678999999999999999554
Q ss_pred ------------hccccchhhhhcCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 ------------CGCGSPPYHYKNADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 ------------~~iahrl~~~~~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||++..+..||+|++|++|++++.|+.+++++.
T Consensus 185 l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 185 MVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 677999998889999999999999999999998864
No 494
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=99.69 E-value=4.1e-17 Score=161.10 Aligned_cols=110 Identities=20% Similarity=0.232 Sum_probs=81.3
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------c--HHHH----------------------H----
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------I--YSWI----------------------I---- 540 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------~--~~~~----------------------~---- 540 (632)
..-+|.-++.+||+|++|||||||+++|.|+++|++. . .... +
T Consensus 24 ~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~ 103 (218)
T cd03266 24 VSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTARENLEYFA 103 (218)
T ss_pred eEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHHHHHHHH
Confidence 3345555679999999999999999999999877430 0 0000 0
Q ss_pred -----------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh----------------------------
Q 047286 541 -----------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY---------------------------- 581 (632)
Q Consensus 541 -----------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~---------------------------- 581 (632)
..+.+.+..+ |++........+||||||||++||||+..
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~ 181 (218)
T cd03266 104 GLYGLKGDELTARLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQ 181 (218)
T ss_pred HHcCCCHHHHHHHHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHH
Confidence 0112233333 55555667778999999999999999654
Q ss_pred --------hccccchhhhh-cCCEEEEEeCCeEeeec
Q 047286 582 --------CGCGSPPYHYK-NADITSVVKNGVIAEKG 609 (632)
Q Consensus 582 --------~~iahrl~~~~-~aD~I~vl~~G~ive~G 609 (632)
+++||++..+. .||+|++|++|++++.|
T Consensus 182 ~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 182 LRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 78899998875 59999999999999875
No 495
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.69 E-value=1e-16 Score=161.32 Aligned_cols=120 Identities=23% Similarity=0.246 Sum_probs=85.4
Q ss_pred ccccEEEeeEEEEEecCCCChHHHHHhhhcCCC---hhh---------h---cHHHH------------------HH---
Q 047286 498 VRGDIVFEHTVALVGENGNGKSTVISLAERFHN---PEQ---------V---IYSWI------------------II--- 541 (632)
Q Consensus 498 ~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~---~~~---------~---~~~~~------------------~~--- 541 (632)
+.-+|.-++.+||+||||||||||+++|.|+++ |++ + ..... ..
T Consensus 21 isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~~tv~eni~ 100 (246)
T PRK14269 21 INMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENIS 100 (246)
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCccccccHHHHhh
Confidence 334555567999999999999999999999974 221 0 00000 00
Q ss_pred -----------------HHHHHHhc--CCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------
Q 047286 542 -----------------KCTNFIAS--LPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------- 581 (632)
Q Consensus 542 -----------------~~~~~i~~--lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------- 581 (632)
.+.+.+.. ++..+.....+.+.+||||||||++||||+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~ 180 (246)
T PRK14269 101 YAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGV 180 (246)
T ss_pred hHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHH
Confidence 01111222 21111233456778999999999999999654
Q ss_pred --------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 --------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 --------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
+++||+++.+. .||+|++|++|+|++.|++++++..
T Consensus 181 l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 181 IEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 78899999774 6999999999999999999999864
No 496
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.69 E-value=8.6e-17 Score=164.14 Aligned_cols=119 Identities=20% Similarity=0.165 Sum_probs=84.7
Q ss_pred cccccEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------hc-----HHHH-------------------HH-H
Q 047286 497 TVRGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------VI-----YSWI-------------------II-K 542 (632)
Q Consensus 497 ~~~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~~-----~~~~-------------------~~-~ 542 (632)
++.-+|.-++.+||+||||||||||+++|.|+++|++ +. .... +. +
T Consensus 19 ~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~ 98 (271)
T PRK13638 19 GLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSD 98 (271)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheEEEeeChhhccccccHHHH
Confidence 3444566667999999999999999999999987743 10 0000 00 0
Q ss_pred H------------------HHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh-----------------------
Q 047286 543 C------------------TNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY----------------------- 581 (632)
Q Consensus 543 ~------------------~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~----------------------- 581 (632)
+ .+.+..+ |++........+||||||||++||||+..
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~ 176 (271)
T PRK13638 99 IAFSLRNLGVPEAEITRRVDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMI 176 (271)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 0 0111111 22222233457899999999999999654
Q ss_pred -------------hccccchhhhh-cCCEEEEEeCCeEeeecChHHHhcc
Q 047286 582 -------------CGCGSPPYHYK-NADITSVVKNGVIAEKGRHDALMKI 617 (632)
Q Consensus 582 -------------~~iahrl~~~~-~aD~I~vl~~G~ive~G~h~eL~~~ 617 (632)
++++|.+..+. .||+|++|++|+|++.|++++++..
T Consensus 177 ~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 177 AIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 67899999885 5999999999999999999998764
No 497
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=99.69 E-value=9.4e-17 Score=162.55 Aligned_cols=122 Identities=14% Similarity=0.089 Sum_probs=88.5
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh---------------------cHHHHHH-----------H----H
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV---------------------IYSWIII-----------K----C 543 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~---------------------~~~~~~~-----------~----~ 543 (632)
-.|.-++.+||+||+|||||||+++|+|+++|++. .....+. . +
T Consensus 45 ~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~ 124 (264)
T PRK13546 45 LKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRNGEVSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMT 124 (264)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHH
Confidence 34555668999999999999999999999887430 0000000 0 0
Q ss_pred HHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh------------------------------------hccccc
Q 047286 544 TNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY------------------------------------CGCGSP 587 (632)
Q Consensus 544 ~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~------------------------------------~~iahr 587 (632)
.+.+.. -+++..+......||||||||++||||+.. ++++|.
T Consensus 125 ~~~l~~--~~l~~~~~~~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~ 202 (264)
T PRK13546 125 PKIIEF--SELGEFIYQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHN 202 (264)
T ss_pred HHHHHH--cCCchhhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 111111 134444555677899999999999999654 788999
Q ss_pred hhhhh-cCCEEEEEeCCeEeeecChHHHhccCCchhHH
Q 047286 588 PYHYK-NADITSVVKNGVIAEKGRHDALMKITDGTYAS 624 (632)
Q Consensus 588 l~~~~-~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~ 624 (632)
+..+. .||+|++|++|+|++.|++++++.+ -+.|.+
T Consensus 203 ~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~ 239 (264)
T PRK13546 203 LGQVRQFCTKIAWIEGGKLKDYGELDDVLPK-YEAFLN 239 (264)
T ss_pred HHHHHHHcCEEEEEECCEEEEeCCHHHHHHH-hHHHHH
Confidence 99875 5999999999999999999999986 333433
No 498
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=99.69 E-value=6.1e-17 Score=172.23 Aligned_cols=122 Identities=20% Similarity=0.198 Sum_probs=87.1
Q ss_pred cEEEeeEEEEEecCCCChHHHHHhhhcCCChhh---------h---cHHHH----------------------H------
Q 047286 501 DIVFEHTVALVGENGNGKSTVISLAERFHNPEQ---------V---IYSWI----------------------I------ 540 (632)
Q Consensus 501 ~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~---------~---~~~~~----------------------~------ 540 (632)
+|.-++.++|+||+|||||||+++|.|+++|.+ + ..... +
T Consensus 25 ~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~ 104 (402)
T PRK09536 25 SVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTP 104 (402)
T ss_pred EECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccch
Confidence 445556899999999999999999999988743 0 10000 0
Q ss_pred -------------HHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh--------------------------
Q 047286 541 -------------IKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY-------------------------- 581 (632)
Q Consensus 541 -------------~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~-------------------------- 581 (632)
..+.+.+..+ |+.........+||||||||++||||+..
T Consensus 105 ~~~~~~~~~~~~~~~v~~~le~v--gl~~~~~~~~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL 182 (402)
T PRK09536 105 HRSRFDTWTETDRAAVERAMERT--GVAQFADRPVTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELV 182 (402)
T ss_pred hcccccCCCHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHH
Confidence 0011111111 23222334456899999999999999654
Q ss_pred ----------hccccchhhh-hcCCEEEEEeCCeEeeecChHHHhccCCchhHHHH
Q 047286 582 ----------CGCGSPPYHY-KNADITSVVKNGVIAEKGRHDALMKITDGTYASLT 626 (632)
Q Consensus 582 ----------~~iahrl~~~-~~aD~I~vl~~G~ive~G~h~eL~~~~~g~y~~l~ 626 (632)
++++|.++.+ +.||+|++|++|+|++.|+++|++.. ....+++
T Consensus 183 ~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~--~~l~~~~ 236 (402)
T PRK09536 183 RRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA--DTLRAAF 236 (402)
T ss_pred HHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc--HHHHHHh
Confidence 6779999998 57999999999999999999999864 4555554
No 499
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.69 E-value=6.1e-17 Score=160.11 Aligned_cols=111 Identities=24% Similarity=0.173 Sum_probs=81.1
Q ss_pred cccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhhc-----------------------------HHHH----------
Q 047286 499 RGDIVFEHTVALVGENGNGKSTVISLAERFHNPEQVI-----------------------------YSWI---------- 539 (632)
Q Consensus 499 ~g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~~-----------------------------~~~~---------- 539 (632)
.-+|.-++++||+||+|||||||+++|.|+++|++.. ....
T Consensus 24 s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~ 103 (220)
T cd03293 24 SLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQQDALLPWLTVLDNVALGLELQGV 103 (220)
T ss_pred eEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEecccccccCCCHHHHHHHHHHHcCC
Confidence 3355666799999999999999999999998774300 0000
Q ss_pred -----HHHHHHHHhcCCCccCcccccCCCCCChHHHHHHHHHHHHhh---------------------------------
Q 047286 540 -----IIKCTNFIASLPQGSDLNVGERGLQLSGGLKQRIARTRARNY--------------------------------- 581 (632)
Q Consensus 540 -----~~~~~~~i~~lp~g~dt~vge~G~~LSgGQrQRiaiARA~~~--------------------------------- 581 (632)
...+.+.+..+ |++........+||||||||++||||+..
T Consensus 104 ~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~ 181 (220)
T cd03293 104 PKAEARERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRET 181 (220)
T ss_pred CHHHHHHHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 00122333333 45444555667899999999999999554
Q ss_pred ----hccccchhhh-hcCCEEEEEe--CCeEeeecCh
Q 047286 582 ----CGCGSPPYHY-KNADITSVVK--NGVIAEKGRH 611 (632)
Q Consensus 582 ----~~iahrl~~~-~~aD~I~vl~--~G~ive~G~h 611 (632)
++++|+++.+ +.||+|++|+ +|+|+++++-
T Consensus 182 ~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 182 GKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 6889999876 4699999999 7999998864
No 500
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=99.69 E-value=6.1e-17 Score=154.83 Aligned_cols=108 Identities=25% Similarity=0.232 Sum_probs=78.8
Q ss_pred ccEEEeeEEEEEecCCCChHHHHHhhhcCCChhhh------------cHHHH---HHHHHHHHhcCCCccCcccccCCCC
Q 047286 500 GDIVFEHTVALVGENGNGKSTVISLAERFHNPEQV------------IYSWI---IIKCTNFIASLPQGSDLNVGERGLQ 564 (632)
Q Consensus 500 g~I~f~~~vaIVG~SGsGKSTL~~ll~r~y~~~~~------------~~~~~---~~~~~~~i~~lp~g~dt~vge~G~~ 564 (632)
-+|.-++.++|+||||||||||+++|.|+++|++. ..... +.-+.+++..+ |++........+
T Consensus 20 ~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~~q~l~~~--gl~~~~~~~~~~ 97 (180)
T cd03214 20 LSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYVPQALELL--GLAHLADRPFNE 97 (180)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHHHHHHHHc--CCHhHhcCCccc
Confidence 34555568999999999999999999999988651 11110 11111122222 344344556789
Q ss_pred CChHHHHHHHHHHHHhh-------------------------------------hccccchhhh-hcCCEEEEEeCCeEe
Q 047286 565 LSGGLKQRIARTRARNY-------------------------------------CGCGSPPYHY-KNADITSVVKNGVIA 606 (632)
Q Consensus 565 LSgGQrQRiaiARA~~~-------------------------------------~~iahrl~~~-~~aD~I~vl~~G~iv 606 (632)
||||||||++||||+.. ++++|+++.+ +.||+|++|++|+++
T Consensus 98 LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~ 177 (180)
T cd03214 98 LSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIV 177 (180)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999544 6789999987 679999999999998
Q ss_pred eec
Q 047286 607 EKG 609 (632)
Q Consensus 607 e~G 609 (632)
+.|
T Consensus 178 ~~~ 180 (180)
T cd03214 178 AQG 180 (180)
T ss_pred ecC
Confidence 765
Done!