Citrus Sinensis ID: 047290


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170--
MGNDEEEQGIKLFGKTITLHGRQVKEEQNQRGSDQPQAVVDKRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGRGLPDGCLYDVASGDHHHQLLHHQLDQFDLEGVFVEDWHPAAAAHGYGGFQNAFPVKRRRSNSGGQLC
cccccHHccccccccccccccccccHHHccccccccccccccccccccccccccccccccEEEcccccccccHHcccccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCECcccccccc
**************KTI****************************KIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVG*****************************************GVFVEDWHPAAAAHGYGGFQNAF**************
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MGNDEEEQGIKLFGKTITLHGRQVKEEQNQRGSDQPQAVVDKRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGRGLPDGCLYDVASGDHHHQLLHHQLDQFDLEGVFVEDWHPAAAAHGYGGFQNAFPVKRRRSNSGGQLC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dof zinc finger protein DOF1.5 Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Acts as a negative regulator in the phytochrome-mediated light responses. Controls phyB-mediated end-of-day response and the phyA-mediated anthocyanin accumulation.probableP68350

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1QYP, chain A
Confidence level:probable
Coverage over the Query: 44-84
View the alignment between query and template
View the model in PyMOL