Query         047291
Match_columns 511
No_of_seqs    195 out of 2034
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 09:38:04 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047291.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047291hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.3E-84 2.8E-89  617.9  46.0  460   40-510    21-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 9.5E-80 2.1E-84  607.3  48.3  481   27-509    10-498 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 1.4E-78   3E-83  600.9  46.3  463   42-509    54-533 (543)
  4 PLN02183 ferulate 5-hydroxylas 100.0 4.6E-78   1E-82  595.4  47.3  467   40-511    31-513 (516)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 9.3E-78   2E-82  593.4  46.2  465   43-510    32-509 (517)
  6 PLN02966 cytochrome P450 83A1  100.0 1.3E-77 2.7E-82  590.9  46.7  481   27-509    11-499 (502)
  7 PLN03112 cytochrome P450 famil 100.0 1.6E-77 3.4E-82  593.1  46.9  484   26-511    13-509 (514)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 2.1E-77 4.6E-82  587.1  46.8  474   30-510    16-497 (504)
  9 KOG0158 Cytochrome P450 CYP3/C 100.0 1.1E-77 2.3E-82  560.9  41.2  452   44-510    30-499 (499)
 10 PTZ00404 cytochrome P450; Prov 100.0 1.3E-75 2.8E-80  575.3  44.3  451   39-509    23-482 (482)
 11 PLN00168 Cytochrome P450; Prov 100.0 4.2E-75 9.2E-80  574.8  47.1  464   43-511    33-518 (519)
 12 PLN02394 trans-cinnamate 4-mon 100.0 6.2E-75 1.3E-79  573.6  47.2  464   40-511    25-503 (503)
 13 PLN02290 cytokinin trans-hydro 100.0 5.7E-74 1.2E-78  568.0  44.1  453   43-510    40-515 (516)
 14 PLN02655 ent-kaurene oxidase   100.0 6.2E-74 1.4E-78  559.4  42.9  450   47-511     1-465 (466)
 15 KOG0157 Cytochrome P450 CYP4/C 100.0 1.4E-73 2.9E-78  554.9  36.2  451   43-510    33-496 (497)
 16 KOG0159 Cytochrome P450 CYP11/ 100.0 1.5E-73 3.2E-78  519.8  34.0  447   44-511    49-519 (519)
 17 PLN03018 homomethionine N-hydr 100.0 9.3E-72   2E-76  547.7  48.0  462   44-510    39-524 (534)
 18 PLN02500 cytochrome P450 90B1  100.0 4.7E-72   1E-76  550.3  40.5  435   41-508    34-488 (490)
 19 PLN02774 brassinosteroid-6-oxi 100.0 8.1E-72 1.8E-76  544.0  39.7  435   38-508    24-462 (463)
 20 PLN03195 fatty acid omega-hydr 100.0 2.4E-71 5.2E-76  548.7  41.0  450   46-510    31-516 (516)
 21 PF00067 p450:  Cytochrome P450 100.0 1.2E-72 2.6E-77  557.5  26.6  449   47-505     1-462 (463)
 22 PLN02169 fatty acid (omega-1)- 100.0 2.5E-70 5.4E-75  535.9  41.7  446   45-509    31-499 (500)
 23 PLN02738 carotene beta-ring hy 100.0 1.9E-70 4.2E-75  543.7  39.9  438   57-510   143-595 (633)
 24 PLN02196 abscisic acid 8'-hydr 100.0 4.5E-70 9.7E-75  531.3  38.9  426   42-509    32-462 (463)
 25 KOG0684 Cytochrome P450 [Secon 100.0 5.7E-70 1.2E-74  483.5  32.3  442   45-510    31-485 (486)
 26 PLN02302 ent-kaurenoic acid ox 100.0 1.1E-68 2.4E-73  529.1  44.4  437   42-510    39-488 (490)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 5.1E-69 1.1E-73  523.2  38.3  434   41-510     3-450 (452)
 28 PLN02987 Cytochrome P450, fami 100.0 3.9E-68 8.4E-73  515.4  41.5  436   40-510    25-469 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 4.4E-68 9.5E-73  520.4  39.0  447   47-510    14-482 (489)
 30 PLN02426 cytochrome P450, fami 100.0 3.6E-66 7.7E-71  505.6  42.4  436   53-511    49-501 (502)
 31 PLN02648 allene oxide synthase 100.0 6.3E-60 1.4E-64  454.0  27.7  404   43-482    15-464 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.4E-54 3.1E-59  412.6  33.3  382   66-509    24-410 (411)
 33 PF12508 DUF3714:  Protein of u  59.2     3.1 6.6E-05   35.1  -0.0   44  360-405    51-94  (200)
 34 PF08492 SRP72:  SRP72 RNA-bind  56.6     8.5 0.00018   25.0   1.7    8  424-431    44-51  (59)
 35 PF12554 MOZART1:  Mitotic-spin  55.9      45 0.00097   20.7   4.6   43  301-343     5-47  (48)
 36 PF05261 Tra_M:  TraM protein,   52.2 1.1E+02  0.0023   23.6   8.4   95  255-349    12-123 (127)
 37 PRK06789 flagellar motor switc  50.8      19 0.00042   24.7   2.8   39  368-406    22-62  (74)
 38 PF05952 ComX:  Bacillus compet  45.0      18  0.0004   23.3   1.8   18  325-342     5-22  (57)
 39 PF10777 YlaC:  Inner membrane   39.1      25 0.00054   27.7   2.1   38  326-363   115-152 (155)
 40 COG0851 MinE Septum formation   36.8      75  0.0016   22.6   3.9   19  332-350    35-53  (88)
 41 PF07886 BA14K:  BA14K-like pro  34.5      39 0.00084   18.7   1.8   16  438-453    16-31  (31)
 42 PRK13713 conjugal transfer pro  34.5 2.1E+02  0.0045   21.8   8.9   90  255-344     5-103 (118)
 43 PF13993 YccJ:  YccJ-like prote  33.4      54  0.0012   21.2   2.5   31  312-342     8-39  (69)
 44 PF09926 DUF2158:  Uncharacteri  32.3      45 0.00098   21.2   2.1   18   77-94      3-20  (53)
 45 TIGR03779 Bac_Flav_CT_M Bacter  30.2      17 0.00037   34.6  -0.0   45  360-406   254-298 (410)
 46 PF08776 VASP_tetra:  VASP tetr  28.5      68  0.0015   18.8   2.2   28  333-373    10-37  (40)
 47 PF09201 SRX:  SRX;  InterPro:   27.3      60  0.0013   25.3   2.4   23  450-472    18-40  (148)
 48 PHA03162 hypothetical protein;  26.6      62  0.0013   24.9   2.3   24  446-469     2-25  (135)
 49 PRK05933 type III secretion sy  26.0      71  0.0015   29.2   3.0   43  364-406   317-362 (372)
 50 PF05084 GRA6:  Granule antigen  25.0 1.1E+02  0.0024   24.4   3.5   21   32-52    164-184 (215)
 51 KOG3506 40S ribosomal protein   24.9      33 0.00071   21.7   0.5   11  443-453    12-22  (56)
 52 PRK10174 hypothetical protein;  24.0 1.1E+02  0.0023   20.3   2.7   31  312-342    14-45  (75)
 53 PF14129 DUF4296:  Domain of un  23.3 2.8E+02  0.0061   19.7   5.7   50  298-347    29-78  (87)
 54 PF14483 Cut8_M:  Cut8 dimerisa  22.6 1.2E+02  0.0025   17.8   2.5   12  330-341    24-35  (38)
 55 PF10915 DUF2709:  Protein of u  22.6 1.8E+02  0.0039   24.2   4.4   51   52-106    89-147 (238)
 56 PF13625 Helicase_C_3:  Helicas  22.6 1.7E+02  0.0037   22.7   4.4   40   65-106    75-114 (129)
 57 COG3954 PrkB Phosphoribulokina  22.2 2.4E+02  0.0053   23.7   5.1   63  312-374    15-89  (289)
 58 COG1759 5-formaminoimidazole-4  21.9 1.1E+02  0.0024   28.0   3.4   70  364-466   275-351 (361)
 59 PRK10597 DNA damage-inducible   21.7 2.6E+02  0.0057   19.7   4.5   37   68-104    24-68  (81)
 60 PF11138 DUF2911:  Protein of u  21.5      72  0.0016   25.5   2.0   22  386-407    52-73  (145)
 61 PF11857 DUF3377:  Domain of un  21.2      96  0.0021   21.3   2.2   24   19-42     32-55  (74)
 62 PF13893 RRM_5:  RNA recognitio  21.0 2.3E+02  0.0049   17.7   5.0   35   70-104     1-39  (56)
 63 COG1886 FliN Flagellar motor s  20.1   1E+02  0.0022   24.4   2.6   41  366-406    84-126 (136)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-84  Score=617.92  Aligned_cols=460  Identities=47%  Similarity=0.833  Sum_probs=405.0

Q ss_pred             hCCCCCCCCCCCCCCcccccccCCCC-CcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCC-cc
Q 047291           40 KGGNHNLPPCPPKLPIIGNLHQLGNL-PHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPK-TT  117 (511)
Q Consensus        40 ~~~~~~~~pgp~~~p~iG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~-~~  117 (511)
                      .+++.+.||||+++|+|||++.+... ++..+.++.++|||++.+++|..++|||+|+++++|++.+++..|.+|+. ..
T Consensus        21 ~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~  100 (489)
T KOG0156|consen   21 YRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTA  100 (489)
T ss_pred             ccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            33448899999999999999999776 99999999999999999999999999999999999999999999999987 33


Q ss_pred             chhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhh
Q 047291          118 AADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTV  197 (511)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~  197 (511)
                      ....+.+++.+.+++.+|+.|+.+||..+..+++...++.....-.++++.+++.+.+ ..+++++|+.+.+..++.+++
T Consensus       101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI  179 (489)
T KOG0156|consen  101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVI  179 (489)
T ss_pred             hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHH
Confidence            4566666778899998999999999999999999999999888889999999999987 323389999999999999999


Q ss_pred             hhhhccccccch--h---hHHHHHHHHHHhccccccccccc-cchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 047291          198 GRCVFGKKANEE--S---KFGTISRRLTTQLQAFSFGDVFP-ALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLER  271 (511)
Q Consensus       198 ~~~~fG~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (511)
                      ++.+||.++.+.  +   ++..++.+...........+++| ++.++....+..+..+....++..++++.|+++++.. 
T Consensus       180 ~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-  258 (489)
T KOG0156|consen  180 CRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-  258 (489)
T ss_pred             HHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Confidence            999999999852  2   36677777777788888889999 5666654345666677777779999999999998765 


Q ss_pred             CCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCC
Q 047291          272 PDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKL  351 (511)
Q Consensus       272 ~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  351 (511)
                      +.  +...|+++.+++..+++.... ++++++...++++++||+|||++++.|++.+|++||++|+|+++||+++++.++
T Consensus       259 ~~--~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r  335 (489)
T KOG0156|consen  259 GD--EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGR  335 (489)
T ss_pred             cc--CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence            21  222899999999876554333 999999999999999999999999999999999999999999999999999988


Q ss_pred             cCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCC
Q 047291          352 KVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNN  431 (511)
Q Consensus       352 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  431 (511)
                      .++.+|+.+||||+|+|+|++|+||++|...||.+.+|+.|+||.|||||.|+++.|++|+||++|+||++|+||||+++
T Consensus       336 ~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~  415 (489)
T KOG0156|consen  336 LVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDS  415 (489)
T ss_pred             CCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             CCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          432 PVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       432 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      + +.......++|||.|+|.|||..+|.+|+.++++.|+++||++++++    ++++... +.++..+.++...+.+|.
T Consensus       416 ~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  416 N-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             c-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcceeeeecCC
Confidence            5 22336789999999999999999999999999999999999998866    2345445 377788889888888875


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=9.5e-80  Score=607.27  Aligned_cols=481  Identities=42%  Similarity=0.731  Sum_probs=388.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCCCCCCCcccccccCCC-CCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHh
Q 047291           27 LLLLFLLILFKFIKGGNHNLPPCPPKLPIIGNLHQLGN-LPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKT  105 (511)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~pgp~~~p~iG~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~  105 (511)
                      +++++++++.+...+++.+.||||+++|++||+..+.. ++..++.+++++||++|++++|+.++++++||+++++|+.+
T Consensus        10 l~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~   89 (499)
T PLN03234         10 LVAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKT   89 (499)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHh
Confidence            33333444444444556788999999999999988844 68899999999999999999999999999999999999998


Q ss_pred             cCcccccCCCccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeH
Q 047291          106 HDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNL  185 (511)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl  185 (511)
                      +...|..++...........+....+..+++.|+++|+.+..++|+++++..+.+.+.+.++++++.+.+...+++++|+
T Consensus        90 ~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~  169 (499)
T PLN03234         90 QDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDL  169 (499)
T ss_pred             CCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEH
Confidence            87777777654333322222223334556899999999866789999999999999999999999999876556778999


Q ss_pred             HHHHHHHHHHhhhhhhccccccchh----hHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHH
Q 047291          186 SEMLLTVTNDTVGRCVFGKKANEES----KFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDD  261 (511)
Q Consensus       186 ~~~~~~~~~~~~~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~  261 (511)
                      .+++..+++++++.++||.+++..+    .+.....+.........+...+|++.++..+.+..++..++.+.+.+++.+
T Consensus       170 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~  249 (499)
T PLN03234        170 SELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQE  249 (499)
T ss_pred             HHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999886432    232323222222222233344555444433333445677888999999999


Q ss_pred             HHHHHHhccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHH
Q 047291          262 VIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQE  341 (511)
Q Consensus       262 ~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~  341 (511)
                      .++++++..+.  ....+|+++.+++...+++....++++++.+++.++++||+|||+++++|++++|++||++|+|+|+
T Consensus       250 ~i~~~~~~~~~--~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~  327 (499)
T PLN03234        250 LLDETLDPNRP--KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQD  327 (499)
T ss_pred             HHHHHHhhccc--CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            99987654321  2235689999887654332223589999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCC-CCC
Q 047291          342 EVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLW-DNP  420 (511)
Q Consensus       342 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p  420 (511)
                      ||++++++++.++.+++++|||++|||+|++|++|+++...+|.+.+|++++||.|||||.|+++.+.+||||++| +||
T Consensus       328 Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P  407 (499)
T PLN03234        328 EVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNP  407 (499)
T ss_pred             HHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCCh
Confidence            9999998777789999999999999999999999999997679999999999999999999999999999999999 899


Q ss_pred             CCCCCCCcCCCCCC--CCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecc
Q 047291          421 EEFIPERFYNNPVN--FMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFK  498 (511)
Q Consensus       421 ~~F~p~R~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  498 (511)
                      ++||||||++++..  ....+..++|||+|+|.|+|+++|++|+++++|.|+++|+|++.++..++.+.....++++..+
T Consensus       408 ~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  487 (499)
T PLN03234        408 NEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHK  487 (499)
T ss_pred             hhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccccc
Confidence            99999999975432  2234678999999999999999999999999999999999999876444556666678888889


Q ss_pred             cCceeEEeecc
Q 047291          499 KIPLYLVPVMY  509 (511)
Q Consensus       499 ~~~~~~~~~~r  509 (511)
                      ++.+.+.+++|
T Consensus       488 ~~~~~~~~~~~  498 (499)
T PLN03234        488 KEHLVLAPTKH  498 (499)
T ss_pred             CCCeEEEeecC
Confidence            99999999987


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.4e-78  Score=600.92  Aligned_cols=463  Identities=28%  Similarity=0.531  Sum_probs=368.9

Q ss_pred             CCCCCCCCCCCCCcccccccCCCC--CcHHHHHHHHhhC-CcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc
Q 047291           42 GNHNLPPCPPKLPIIGNLHQLGNL--PHRSLRALSKKYG-PLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA  118 (511)
Q Consensus        42 ~~~~~~pgp~~~p~iG~~~~~~~~--~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~  118 (511)
                      ++.+.||||+++|++|+++.+..+  .+.++.++.++|| ++|++++|+.++|+|+||+++++|+.++...|..++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            355689999999999999877332  3678899999999 8999999999999999999999999988888888775443


Q ss_pred             hhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhh
Q 047291          119 ADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVG  198 (511)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~  198 (511)
                      ...++.+..+.+++.+|+.|+++|+.+..+++++..++.+.+.+.++++.+.+.+.+...+++++|+.+.++++++++++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            33333332346788889999999999767788887788888999999999988887654456789999999999999999


Q ss_pred             hhhccccccc------hh---hHHHHHHHHHHhcc---ccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHH
Q 047291          199 RCVFGKKANE------ES---KFGTISRRLTTQLQ---AFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEH  266 (511)
Q Consensus       199 ~~~fG~~~~~------~~---~~~~~~~~~~~~~~---~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (511)
                      +++||.++..      ++   +.............   ...+.+++|++.++. +.+..+..++..+.+.+++.+.++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999987631      11   12222333222111   112334455544431 11233445556777888888888887


Q ss_pred             HhccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 047291          267 RNLERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRV  346 (511)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  346 (511)
                      ++..+.+......|+++.|++...+++ ...++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++
T Consensus       293 ~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v  371 (543)
T PLN02971        293 IKMWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRV  371 (543)
T ss_pred             HHHHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            654322212234699999998643221 1249999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCC
Q 047291          347 VGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPE  426 (511)
Q Consensus       347 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  426 (511)
                      +++++.++.+++++|||++|||+|+||++|++|...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||
T Consensus       372 ~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~Pe  451 (543)
T PLN02971        372 VGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPE  451 (543)
T ss_pred             hCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcc
Confidence            98877899999999999999999999999999987789999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCC--CCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeE
Q 047291          427 RFYNNPVN--FMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYL  504 (511)
Q Consensus       427 R~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (511)
                      ||+++..+  ....+..++|||+|+|.|+|++||+.|+++++|+|+++|++++.++.  ...++...++ ++..++++++
T Consensus       452 Rfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~  528 (543)
T PLN02971        452 RHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLVM  528 (543)
T ss_pred             cCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-ccccccccee
Confidence            99975322  11245689999999999999999999999999999999999987643  2355666666 6656778888


Q ss_pred             Eeecc
Q 047291          505 VPVMY  509 (511)
Q Consensus       505 ~~~~r  509 (511)
                      .+++|
T Consensus       529 ~~~~~  533 (543)
T PLN02971        529 VGELR  533 (543)
T ss_pred             eeeec
Confidence            88887


No 4  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=4.6e-78  Score=595.42  Aligned_cols=467  Identities=39%  Similarity=0.731  Sum_probs=374.0

Q ss_pred             hCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccch
Q 047291           40 KGGNHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAA  119 (511)
Q Consensus        40 ~~~~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~  119 (511)
                      ..++.+.||||+++|++|++..+....+.++.+++++||++|++++++.++|+|+||+++++|+.++...|+.++.....
T Consensus        31 ~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~  110 (516)
T PLN02183         31 LRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI  110 (516)
T ss_pred             ccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence            34456789999999999998877555678899999999999999999999999999999999999877777766543333


Q ss_pred             hhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhh
Q 047291          120 DIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGR  199 (511)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~  199 (511)
                      .....++.+++++.+|+.|+++|+.++.++|+...++.+.+.+ ++++.+++.+...  .++++|+.++++.++++++++
T Consensus       111 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~vi~~  187 (516)
T PLN02183        111 SYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN--IGKPVNIGELIFTLTRNITYR  187 (516)
T ss_pred             hccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHh
Confidence            3232223466788889999999998667899999999988864 6789999988652  367899999999999999999


Q ss_pred             hhccccccch-hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCC-----
Q 047291          200 CVFGKKANEE-SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPD-----  273 (511)
Q Consensus       200 ~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----  273 (511)
                      ++||.+.+.. +++.+....+............+|++.++.. ....++..+..+.+.+++.+.++++.++...+     
T Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  266 (516)
T PLN02183        188 AAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADND  266 (516)
T ss_pred             HhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            9999977542 3455555554443333334455665544311 12344566677788888888888775432211     


Q ss_pred             CccccccHHHHHHHhccccc---------cccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 047291          274 DKSVAKDFVDILLQVQKDAT---------TKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVR  344 (511)
Q Consensus       274 ~~~~~~~~~~~ll~~~~~~~---------~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  344 (511)
                      ......|+++.++++..++.         ....++++++.+++.++++||+|||+.+++|++++|++||++|+|+++||+
T Consensus       267 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~  346 (516)
T PLN02183        267 SEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELA  346 (516)
T ss_pred             cccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            01234689999998643211         112589999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCC
Q 047291          345 RVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFI  424 (511)
Q Consensus       345 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  424 (511)
                      ++++.++.++.+++++||||+|||+||||++|++|... |.+.+|++++||.|||||.|.++.+++||||++|+||++|+
T Consensus       347 ~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~  425 (516)
T PLN02183        347 DVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFK  425 (516)
T ss_pred             HHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccC
Confidence            99986667899999999999999999999999999976 99999999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCC-CCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCcee
Q 047291          425 PERFYNNPVN-FMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLY  503 (511)
Q Consensus       425 p~R~~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (511)
                      ||||++++.. ...+...++|||+|+|.|+|++||++|+++++|+|+++|++++.++...+..+....++.+..++.++.
T Consensus       426 PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (516)
T PLN02183        426 PSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLV  505 (516)
T ss_pred             chhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcE
Confidence            9999975432 123456899999999999999999999999999999999999876543233444445566666777999


Q ss_pred             EEeeccCC
Q 047291          504 LVPVMYSA  511 (511)
Q Consensus       504 ~~~~~r~~  511 (511)
                      +.+++|.+
T Consensus       506 ~~~~~r~~  513 (516)
T PLN02183        506 AVPTYRLQ  513 (516)
T ss_pred             EEeecCCC
Confidence            99999853


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=9.3e-78  Score=593.40  Aligned_cols=465  Identities=38%  Similarity=0.717  Sum_probs=378.1

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhh
Q 047291           43 NHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIF  122 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~  122 (511)
                      +.+.||||.++|++|+++.+..+++..+.+++++||++|++++|+.++++++||+++++++.++...|.+++........
T Consensus        32 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~  111 (517)
T PLN02687         32 KRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHM  111 (517)
T ss_pred             CCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhh
Confidence            34578999999999999888777899999999999999999999999999999999999999877778777654433333


Q ss_pred             ccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhc
Q 047291          123 LYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVF  202 (511)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  202 (511)
                      ...+.+.+++.+|+.|+++|+.+..+.|+.++++.+.+.+.+.++.+++.+.+.. +++++|+.++++.+++|+++.++|
T Consensus       112 ~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~~f  190 (517)
T PLN02687        112 AYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRAMV  190 (517)
T ss_pred             ccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHh
Confidence            3223466778789999999999644889999999999999999999999997643 356899999999999999999999


Q ss_pred             cccccc---h---hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 047291          203 GKKANE---E---SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKS  276 (511)
Q Consensus       203 G~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  276 (511)
                      |.++..   .   +.+...+..+............+|++.|+.. .+..++..+..+.+.+++.+.++++++..... ..
T Consensus       191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-~~  268 (517)
T PLN02687        191 GRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG-SE  268 (517)
T ss_pred             CccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-Cc
Confidence            988642   1   2344444444333222222345565544321 12234456677888889999999887653221 23


Q ss_pred             ccccHHHHHHHhcccc---ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcC
Q 047291          277 VAKDFVDILLQVQKDA---TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKV  353 (511)
Q Consensus       277 ~~~~~~~~ll~~~~~~---~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  353 (511)
                      ...|+++.+++...+.   .....++++++++++..+++||+|||+++++|++++|++||++|+|+++||+++.+.++.+
T Consensus       269 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  348 (517)
T PLN02687        269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLV  348 (517)
T ss_pred             ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCC
Confidence            4579999999875432   1123699999999999999999999999999999999999999999999999999877778


Q ss_pred             CcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCC
Q 047291          354 EASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPV  433 (511)
Q Consensus       354 ~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~  433 (511)
                      +.+++++||||+||++|+||++|+++...+|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+||||+++..
T Consensus       349 ~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~  428 (517)
T PLN02687        349 SESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGE  428 (517)
T ss_pred             CHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCC
Confidence            99999999999999999999999999877899999999999999999999999999999999999999999999997532


Q ss_pred             CC----CCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          434 NF----MGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       434 ~~----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      ..    ...+..++|||+|+|.|+|++||++|+++++|+|+++|++++.++..+++++....++.++.+..++.+++++|
T Consensus       429 ~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        429 HAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             ccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccC
Confidence            11    12356899999999999999999999999999999999999876543333444445667777888999999998


Q ss_pred             C
Q 047291          510 S  510 (511)
Q Consensus       510 ~  510 (511)
                      +
T Consensus       509 ~  509 (517)
T PLN02687        509 L  509 (517)
T ss_pred             C
Confidence            5


No 6  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.3e-77  Score=590.91  Aligned_cols=481  Identities=39%  Similarity=0.703  Sum_probs=375.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHh
Q 047291           27 LLLLFLLILFKFIKGGNHNLPPCPPKLPIIGNLHQL-GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKT  105 (511)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~pgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~  105 (511)
                      +++++++.++....++..+.||||+++|++||++.+ ..+++.++.+++++||++|++++++.++++++||+++++|+.+
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~   90 (502)
T PLN02966         11 LAAVLLFFLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKT   90 (502)
T ss_pred             HHHHHHHHHHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHh
Confidence            333444444444445566789999999999999887 4468899999999999999999999999999999999999987


Q ss_pred             cCcccccCCCccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeH
Q 047291          106 HDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNL  185 (511)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl  185 (511)
                      +...|.+++..........+.....++.+|+.|+++|+.++.++|++++++.+.+.+.+.++++++.|.+...+++.+|+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl  170 (502)
T PLN02966         91 QDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDI  170 (502)
T ss_pred             CcccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeH
Confidence            77666655443332222223333445667999999999977889999999999999999999999999876555678999


Q ss_pred             HHHHHHHHHHhhhhhhccccccch-hhHHHHHH---HHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHH
Q 047291          186 SEMLLTVTNDTVGRCVFGKKANEE-SKFGTISR---RLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDD  261 (511)
Q Consensus       186 ~~~~~~~~~~~~~~~~fG~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~  261 (511)
                      .++++.+++++++.++||.+++.. ++......   ..........+..++|++..+..+.+..+......+...+++.+
T Consensus       171 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (502)
T PLN02966        171 SELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQE  250 (502)
T ss_pred             HHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999987642 22222222   22222222233444554332222222233344556667777777


Q ss_pred             HHHHHHhccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHH
Q 047291          262 VIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQE  341 (511)
Q Consensus       262 ~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~  341 (511)
                      .++++......  .....++++.+++..++......++++++.++++++++||+|||+.+++|++|+|++||++|+|+++
T Consensus       251 ~i~~~~~~~~~--~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~  328 (502)
T PLN02966        251 VVNETLDPKRV--KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQA  328 (502)
T ss_pred             HHHHHHhcccc--ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHH
Confidence            77766543211  1234689999997654432224589999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCC--CcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCC-C
Q 047291          342 EVRRVVGKK--LKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLW-D  418 (511)
Q Consensus       342 Ei~~~~~~~--~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~  418 (511)
                      ||+++++++  ..++.+++++||||+||++|+||++|+++...+|.+.+|++++||.|||||.|.++.+.+||||++| +
T Consensus       329 Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~  408 (502)
T PLN02966        329 EVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGP  408 (502)
T ss_pred             HHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccC
Confidence            999998753  3478899999999999999999999999987779999999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecc
Q 047291          419 NPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFK  498 (511)
Q Consensus       419 ~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  498 (511)
                      ||++|+||||++++.+....+..++|||+|+|+|+|++||.+|+++++|.|+++|+|++.++...+.++.+...|++..+
T Consensus       409 dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~  488 (502)
T PLN02966        409 NPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHK  488 (502)
T ss_pred             ChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeecc
Confidence            99999999999754332234568999999999999999999999999999999999998876544455556666777656


Q ss_pred             cCceeEEeecc
Q 047291          499 KIPLYLVPVMY  509 (511)
Q Consensus       499 ~~~~~~~~~~r  509 (511)
                      +.++.++.+|-
T Consensus       489 ~~~~~~~~~~~  499 (502)
T PLN02966        489 SQHLKLVPEKV  499 (502)
T ss_pred             CCCeEEEEEeC
Confidence            66776666554


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.6e-77  Score=593.11  Aligned_cols=484  Identities=36%  Similarity=0.660  Sum_probs=385.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHh
Q 047291           26 SLLLLFLLILFKFIKGGNHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKT  105 (511)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~  105 (511)
                      +++.++++.+.+..++++.+.||||+++|++||++.+..+++.++.++++|||++|++++++.+.++++||+++++|+.+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~   92 (514)
T PLN03112         13 LIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLR   92 (514)
T ss_pred             HHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHh
Confidence            33334444444444456677899999999999998887778999999999999999999999999999999999999988


Q ss_pred             cCcccccCCCccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeH
Q 047291          106 HDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNL  185 (511)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl  185 (511)
                      +...|+.++.........++...++++.+|+.|+++|+.+.++.|+.++++.+.+.+.+.++.+++.+.+...+++++|+
T Consensus        93 ~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~  172 (514)
T PLN03112         93 QDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNL  172 (514)
T ss_pred             CCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeH
Confidence            87778776553322222223334566778999999999976788999999999999999999999987665445678999


Q ss_pred             HHHHHHHHHHhhhhhhccccccc--------hhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHH
Q 047291          186 SEMLLTVTNDTVGRCVFGKKANE--------ESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDA  257 (511)
Q Consensus       186 ~~~~~~~~~~~~~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~  257 (511)
                      .++++.+++++++.++||.++..        ..++......+........+...+|.+.++.. .+..++.++..+.+.+
T Consensus       173 ~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~  251 (514)
T PLN03112        173 REVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREVEKRVDE  251 (514)
T ss_pred             HHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHHHHHHHH
Confidence            99999999999999999998631        11233333333322222223344565544322 1233556677888888


Q ss_pred             HHHHHHHHHHhccCCCC-ccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHH
Q 047291          258 FFDDVIAEHRNLERPDD-KSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTM  336 (511)
Q Consensus       258 ~~~~~i~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~  336 (511)
                      +++..++++++..+... .....|+++.++++..+++ +..++++++.+++..+++||+|||+++++|++++|++||++|
T Consensus       252 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq  330 (514)
T PLN03112        252 FHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVL  330 (514)
T ss_pred             HHHHHHHHHHHhhcccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHH
Confidence            89999888765432111 1234689999998654322 235899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCC
Q 047291          337 KKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKL  416 (511)
Q Consensus       337 ~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  416 (511)
                      +|+++||++++++++.++.+++++|||++|||+||+|++|+++...+|.+.+|++++||.|||||.|.++.+.+|+||++
T Consensus       331 ~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~  410 (514)
T PLN03112        331 RKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKI  410 (514)
T ss_pred             HHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCccc
Confidence            99999999999877778999999999999999999999999998777999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcCCCCCCC----CCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCcccc
Q 047291          417 WDNPEEFIPERFYNNPVNF----MGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETF  492 (511)
Q Consensus       417 ~~~p~~F~p~R~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  492 (511)
                      |+||++|+||||+.+....    ...+..++|||+|+|.|+|++||++|++++++.|+++|||++.++...+++.....+
T Consensus       411 ~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  490 (514)
T PLN03112        411 WDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVY  490 (514)
T ss_pred             CCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCcccc
Confidence            9999999999987542210    123457999999999999999999999999999999999998755433344555566


Q ss_pred             CceecccCceeEEeeccCC
Q 047291          493 GLTVFKKIPLYLVPVMYSA  511 (511)
Q Consensus       493 ~~~~~~~~~~~~~~~~r~~  511 (511)
                      +++.++++++.+++.||++
T Consensus       491 ~~~~~~~~~~~~~~~~r~~  509 (514)
T PLN03112        491 GMTMPKAKPLRAVATPRLA  509 (514)
T ss_pred             CcccccCCCeEEEeecCCc
Confidence            7777889999999999974


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.1e-77  Score=587.06  Aligned_cols=474  Identities=35%  Similarity=0.686  Sum_probs=383.5

Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcc
Q 047291           30 LFLLILFKFIKGGNHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDII  109 (511)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~  109 (511)
                      +..+++-++....+.+.||||+++|++|+++.+..+++.++.+++++||++|++++|+.++|+|+||+++++++.++...
T Consensus        16 ~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~   95 (504)
T PLN00110         16 ITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDIN   95 (504)
T ss_pred             HHHHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchh
Confidence            33444545555667788999999999999887766788999999999999999999999999999999999999987777


Q ss_pred             cccCCCccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH
Q 047291          110 FSNRPKTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML  189 (511)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~  189 (511)
                      |..++..........++.+++++.+|+.|+++|+.+..++|+++.++.+.+.+.++++.+++.+.+...+++++|+.+++
T Consensus        96 f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~  175 (504)
T PLN00110         96 FSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEML  175 (504)
T ss_pred             hcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHH
Confidence            87776544333233334467778889999999999655689999999999999999999999987765567789999999


Q ss_pred             HHHHHHhhhhhhcccccc-----chhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHH
Q 047291          190 LTVTNDTVGRCVFGKKAN-----EESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIA  264 (511)
Q Consensus       190 ~~~~~~~~~~~~fG~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~  264 (511)
                      ..++.++++.++||.++.     +.+++...............+...+|.+.|+.. .+..+..++..+.+.+++.+.++
T Consensus       176 ~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~  254 (504)
T PLN00110        176 TFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDI-QGIERGMKHLHKKFDKLLTRMIE  254 (504)
T ss_pred             HHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCc-chHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998762     123455555544433322233345665554321 12334456667778888888888


Q ss_pred             HHHhccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 047291          265 EHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVR  344 (511)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  344 (511)
                      ++++....  .....|+++.+++...+. ....++++++.++++.+++||+|||+.+++|++++|++||++|+|+++|++
T Consensus       255 ~~~~~~~~--~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  331 (504)
T PLN00110        255 EHTASAHE--RKGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMD  331 (504)
T ss_pred             HHHhhccc--cccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            77654321  123468999999764322 124699999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCC
Q 047291          345 RVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFI  424 (511)
Q Consensus       345 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  424 (511)
                      ++++++..++.+++++|||++|||+||||++|+++...+|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+
T Consensus       332 ~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~  411 (504)
T PLN00110        332 QVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFR  411 (504)
T ss_pred             HHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCC
Confidence            99987777899999999999999999999999999877899999999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCCCC---CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCc
Q 047291          425 PERFYNNPVNFM---GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIP  501 (511)
Q Consensus       425 p~R~~~~~~~~~---~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (511)
                      ||||+++.....   .....++|||+|+|.|+|++||+.|+++++|+|+++||+++.++.   ++.....+++++.|+.+
T Consensus       412 PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~  488 (504)
T PLN00110        412 PERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVP  488 (504)
T ss_pred             cccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCC
Confidence            999996532211   123579999999999999999999999999999999999987653   23333456778889999


Q ss_pred             eeEEeeccC
Q 047291          502 LYLVPVMYS  510 (511)
Q Consensus       502 ~~~~~~~r~  510 (511)
                      +.+++++|.
T Consensus       489 ~~~~~~~r~  497 (504)
T PLN00110        489 LSAMVTPRL  497 (504)
T ss_pred             ceEeeccCC
Confidence            999999884


No 9  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-77  Score=560.91  Aligned_cols=452  Identities=27%  Similarity=0.437  Sum_probs=358.8

Q ss_pred             CCCCCCCCCCCcccccccCC--CCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCC--Cccch
Q 047291           44 HNLPPCPPKLPIIGNLHQLG--NLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRP--KTTAA  119 (511)
Q Consensus        44 ~~~~pgp~~~p~iG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~--~~~~~  119 (511)
                      .+.+|+|+++|++|++..+.  +.+.....+...+||+++.+..+.++.++|+||+++++|+.++..+|.++.  .....
T Consensus        30 rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~  109 (499)
T KOG0158|consen   30 RRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDP  109 (499)
T ss_pred             cCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCC
Confidence            44899999999999998873  223444444445559999999999999999999999999999988888843  22211


Q ss_pred             hhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhh
Q 047291          120 DIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGR  199 (511)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~  199 (511)
                      ..  .-....++...|+.||++|.. +.|.||..+++.+.+.+.+.++++++.+.+....+..+++.+.+..++.|+|++
T Consensus       110 ~~--~l~~~~Lf~~~g~~WK~lR~~-lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~  186 (499)
T KOG0158|consen  110 ED--PLSALNLFFLRGERWKRLRTK-LSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGS  186 (499)
T ss_pred             CC--cccccCchhccCchHHHHHHh-hccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhH
Confidence            11  112245677789999999999 689999999999999999999999999998654446889999999999999999


Q ss_pred             hhccccccc----hhhHHHHHHHHHHh-ccccc----cccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047291          200 CVFGKKANE----ESKFGTISRRLTTQ-LQAFS----FGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLE  270 (511)
Q Consensus       200 ~~fG~~~~~----~~~~~~~~~~~~~~-~~~~~----~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  270 (511)
                      ++||.+.+.    ..++.......... .....    ....+|.+...  + ..........+.+.+.+...++.|... 
T Consensus       187 ~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~--l-~~~~~~~~~~~~~~~~v~~~v~~R~~~-  262 (499)
T KOG0158|consen  187 CAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP--L-RVKLFPEDVTDFFRKLVNSRVEQREKE-  262 (499)
T ss_pred             hhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh--h-hcccChHHHHHHHHHHHHHHHHHHHhc-
Confidence            999998763    23454433333332 11111    11122222211  0 111123445555666666666666221 


Q ss_pred             CCCCccccccHHHHHHHhcccc---cccc-CCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 047291          271 RPDDKSVAKDFVDILLQVQKDA---TTKH-ELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRV  346 (511)
Q Consensus       271 ~~~~~~~~~~~~~~ll~~~~~~---~~~~-~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  346 (511)
                          ...++|+++.++++..+.   .... .+|.+|++++++.+++||.||||++++.++|+||+||++|+|||+||+++
T Consensus       263 ----~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~  338 (499)
T KOG0158|consen  263 ----NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEV  338 (499)
T ss_pred             ----CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence                356789999999987541   1122 59999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceec-CeeeCCCcEEEeehHHhhcCCCCCCCCCCCCC
Q 047291          347 VGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMG-GYEIPAKTRVFANAWAIQRDPKLWDNPEEFIP  425 (511)
Q Consensus       347 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p  425 (511)
                      ..+...++++.+.+|+||++||+||||+||+++.. .|.+++|++++ ++.||||+.|+++++++||||++||||++|+|
T Consensus       339 ~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~P  417 (499)
T KOG0158|consen  339 LEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKP  417 (499)
T ss_pred             hcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCC
Confidence            77655599999999999999999999999999995 59999999999 99999999999999999999999999999999


Q ss_pred             CCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEE
Q 047291          426 ERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLV  505 (511)
Q Consensus       426 ~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (511)
                      |||.+.+.+ ..++..|+|||.|||.|+|++||.+|+|+.|++||++|+++..+.+. .. ......+.++.|+++|.++
T Consensus       418 ERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~-~~-~~~~~~~~~l~pk~gi~Lk  494 (499)
T KOG0158|consen  418 ERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTI-IP-LEGDPKGFTLSPKGGIWLK  494 (499)
T ss_pred             ccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCccc-Cc-ccCCccceeeecCCceEEE
Confidence            999987654 44678999999999999999999999999999999999999887433 22 2222236778999999999


Q ss_pred             eeccC
Q 047291          506 PVMYS  510 (511)
Q Consensus       506 ~~~r~  510 (511)
                      ..+|.
T Consensus       495 l~~r~  499 (499)
T KOG0158|consen  495 LEPRD  499 (499)
T ss_pred             EEeCC
Confidence            99985


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.3e-75  Score=575.29  Aligned_cols=451  Identities=26%  Similarity=0.425  Sum_probs=356.9

Q ss_pred             hhCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc
Q 047291           39 IKGGNHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA  118 (511)
Q Consensus        39 ~~~~~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~  118 (511)
                      .++.+.+.+|||+++|++|++..+..+++..+.+++++||++|++++++.++|+++||+++++|+.++...|..++....
T Consensus        23 ~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         23 YKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             hhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            33456778999999999999988877889999999999999999999999999999999999999877666665554333


Q ss_pred             hhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhh
Q 047291          119 ADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVG  198 (511)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~  198 (511)
                      ...... + .++++.+|+.|+++|+. +.+.|++..++.+.+.+.+.++.+++.|.+..++++.+|+.++++++++|+++
T Consensus       103 ~~~~~~-~-~~l~~~~g~~w~~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  179 (482)
T PTZ00404        103 IKHGTF-Y-HGIVTSSGEYWKRNREI-VGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMF  179 (482)
T ss_pred             eeeecc-C-CceeccChHHHHHHHHH-HHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHH
Confidence            221111 2 34566789999999999 68899999999999999999999999997655456779999999999999999


Q ss_pred             hhhccccccch--------hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047291          199 RCVFGKKANEE--------SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLE  270 (511)
Q Consensus       199 ~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  270 (511)
                      .++||.+++..        .++...+...........+...++++...  +........+..+.+.+++.+.++++++..
T Consensus       180 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  257 (482)
T PTZ00404        180 KYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL--YYQYLEHTDKNFKKIKKFIKEKYHEHLKTI  257 (482)
T ss_pred             HHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            99999987532        12333333333322211122222222111  001112234556677777777777665432


Q ss_pred             CCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCC
Q 047291          271 RPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKK  350 (511)
Q Consensus       271 ~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  350 (511)
                      .   .....|+++.++++..+.   .....+++++++..+++||+|||+++++|++++|++||++|+||++||+++++++
T Consensus       258 ~---~~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~  331 (482)
T PTZ00404        258 D---PEVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGR  331 (482)
T ss_pred             C---CCCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC
Confidence            1   123568999999864221   1223345889999999999999999999999999999999999999999999876


Q ss_pred             CcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCccee-cCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcC
Q 047291          351 LKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM-GGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFY  429 (511)
Q Consensus       351 ~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~  429 (511)
                      ..++.+++++||||+||++||||++|+++...+|.+.+|+++ +||.||||+.|.++.+++|+||++|+||++|+||||+
T Consensus       332 ~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl  411 (482)
T PTZ00404        332 NKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFL  411 (482)
T ss_pred             CCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccC
Confidence            678999999999999999999999999997667999999999 9999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          430 NNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       430 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      +..     .+..++|||+|+|.|+|++||++|++++++.|+++|++++.++..   .......+.++. +.++.+++++|
T Consensus       412 ~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        412 NPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---IDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             CCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CCcccccceeec-CCCceeeeecC
Confidence            642     456899999999999999999999999999999999999865432   222334566666 66799998887


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=4.2e-75  Score=574.77  Aligned_cols=464  Identities=28%  Similarity=0.453  Sum_probs=364.8

Q ss_pred             CCCCCCCCCCCCcccccccCC---CCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccch
Q 047291           43 NHNLPPCPPKLPIIGNLHQLG---NLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAA  119 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~  119 (511)
                      ..+.||||+++|++|++..+.   .+++..+.+++++||++|++++|+.+.++++||+++++++.++...|..++.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            456789999999999987653   34678899999999999999999999999999999999999887777776653332


Q ss_pred             hhhccCCceeEe-cCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhh
Q 047291          120 DIFLYGCIDIAF-SPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVG  198 (511)
Q Consensus       120 ~~~~~~~~~~~~-~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~  198 (511)
                      ...+.++ +.+. +.+|+.|+++||.++.++|++++++.+.+.+.+.++.+++.+.+....++.+|+.++++.++.++++
T Consensus       113 ~~~~~~~-~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~  191 (519)
T PLN00168        113 RLLGESD-NTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLV  191 (519)
T ss_pred             hhhccCC-CceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence            3332211 2332 3679999999986689999999999999999999999999998754445578999999999999999


Q ss_pred             hhhccccccchh--hHHHHHHHHHHh-ccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC---
Q 047291          199 RCVFGKKANEES--KFGTISRRLTTQ-LQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERP---  272 (511)
Q Consensus       199 ~~~fG~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---  272 (511)
                      .++||.++++..  .+.......... .....+...+|.+.+... .+..++..+..+.+.+++..+++++++..+.   
T Consensus       192 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  270 (519)
T PLN00168        192 LMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLF-RGRLQKALALRRRQKELFVPLIDARREYKNHLGQ  270 (519)
T ss_pred             HHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            999999886421  222222222111 112223344554432211 1223345567788888999998887654210   


Q ss_pred             -CC-c----cccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 047291          273 -DD-K----SVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRV  346 (511)
Q Consensus       273 -~~-~----~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  346 (511)
                       +. .    ....|+++.|++....+..+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++
T Consensus       271 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v  350 (519)
T PLN00168        271 GGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAK  350 (519)
T ss_pred             cCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence             00 0    11468999999764322222469999999999999999999999999999999999999999999999999


Q ss_pred             hcCC-CcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCC
Q 047291          347 VGKK-LKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIP  425 (511)
Q Consensus       347 ~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p  425 (511)
                      ++++ +.++.+++++||||+||++|+||++|+++...+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|
T Consensus       351 ~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~P  430 (519)
T PLN00168        351 TGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVP  430 (519)
T ss_pred             hCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCc
Confidence            9753 568999999999999999999999999998878999999999999999999999999999999999999999999


Q ss_pred             CCcCCCCCC-----CCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccC
Q 047291          426 ERFYNNPVN-----FMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKI  500 (511)
Q Consensus       426 ~R~~~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (511)
                      |||++....     ....+..++|||+|+|+|+|++||++|+++++++|+++|+|++.++..   .+.....+++..+++
T Consensus       431 eRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~  507 (519)
T PLN00168        431 ERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDFAEKREFTTVMAK  507 (519)
T ss_pred             ccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CChhhhceeEEeecC
Confidence            999974221     112346899999999999999999999999999999999999876532   223233455667888


Q ss_pred             ceeEEeeccCC
Q 047291          501 PLYLVPVMYSA  511 (511)
Q Consensus       501 ~~~~~~~~r~~  511 (511)
                      ++.+++++|++
T Consensus       508 ~~~~~~~~R~~  518 (519)
T PLN00168        508 PLRARLVPRRT  518 (519)
T ss_pred             CcEEEEEeccC
Confidence            99999999974


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=6.2e-75  Score=573.59  Aligned_cols=464  Identities=32%  Similarity=0.576  Sum_probs=357.6

Q ss_pred             hCCCCCCCCCCCCCCcccccccCCCC-CcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc
Q 047291           40 KGGNHNLPPCPPKLPIIGNLHQLGNL-PHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA  118 (511)
Q Consensus        40 ~~~~~~~~pgp~~~p~iG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~  118 (511)
                      ..++.+.||||+++|++|+++.+..+ .+..+.+++++||++|++++|++++|+|+||+++++|+.++...|.+++....
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            44667899999999999999887544 46899999999999999999999999999999999999877666766654333


Q ss_pred             hhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhcc-CCCceeHHHHHHHHHHHhh
Q 047291          119 ADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASL-KGASVNLSEMLLTVTNDTV  197 (511)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~vdl~~~~~~~~~~~~  197 (511)
                      ...+...+.+.+++.+|+.|+++|+.+..++|+++.++.+.+.+.+.++.+++.+.+..+ .++.+|+.++++.+++|++
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi  184 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM  184 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence            333322234567777899999999996568999999999999999999999999976532 2456999999999999999


Q ss_pred             hhhhccccccchh-h-HHH---HHHHHHHhccc--cccccccccchhhhhccCchHHHHHHHHHHHH-HHHHHHHHHHhc
Q 047291          198 GRCVFGKKANEES-K-FGT---ISRRLTTQLQA--FSFGDVFPALGWMDHLTGLIPCVKATFRSLDA-FFDDVIAEHRNL  269 (511)
Q Consensus       198 ~~~~fG~~~~~~~-~-~~~---~~~~~~~~~~~--~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~  269 (511)
                      +.++||.+++..+ . +..   ...........  ......+|++.+.  +....+........... +.+..++++++.
T Consensus       185 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (503)
T PLN02394        185 YRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERKKL  262 (503)
T ss_pred             HHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999886322 1 111   11111111111  1122333433221  11111112222222222 333455555442


Q ss_pred             cCC--CCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Q 047291          270 ERP--DDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVV  347 (511)
Q Consensus       270 ~~~--~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  347 (511)
                      .+.  .......|+++.++++..+    +.++++++..++..+++||+|||+++++|++|+|++||++|+|||+||++++
T Consensus       263 ~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~  338 (503)
T PLN02394        263 MSAKGMDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVL  338 (503)
T ss_pred             hhhccCCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence            211  1122347899999986543    3589999999999999999999999999999999999999999999999999


Q ss_pred             cCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCC
Q 047291          348 GKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPER  427 (511)
Q Consensus       348 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  427 (511)
                      +++..++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|.++.+.+|+||++|+||++|+|||
T Consensus       339 ~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeR  418 (503)
T PLN02394        339 GPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPER  418 (503)
T ss_pred             CCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccc
Confidence            87667889999999999999999999999999988899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCC--CCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccC-ceecccCceeE
Q 047291          428 FYNNPVN--FMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFG-LTVFKKIPLYL  504 (511)
Q Consensus       428 ~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  504 (511)
                      |++++.+  .......++|||+|+|.|+|++||++|+++++|.|+++|++++.++..  .++....++ .+...+.+.++
T Consensus       419 wl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  496 (503)
T PLN02394        419 FLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHSTV  496 (503)
T ss_pred             cCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCCceE
Confidence            9965421  122456899999999999999999999999999999999999876542  233333343 55657779999


Q ss_pred             EeeccCC
Q 047291          505 VPVMYSA  511 (511)
Q Consensus       505 ~~~~r~~  511 (511)
                      ++.+|++
T Consensus       497 ~~~~r~~  503 (503)
T PLN02394        497 VFKPRSA  503 (503)
T ss_pred             EeecCCC
Confidence            9999975


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=5.7e-74  Score=568.05  Aligned_cols=453  Identities=21%  Similarity=0.343  Sum_probs=356.5

Q ss_pred             CCCCCCCCCCCCcccccccCC-------------------CCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHH
Q 047291           43 NHNLPPCPPKLPIIGNLHQLG-------------------NLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMM  103 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~~-------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~  103 (511)
                      ....||||+++|++||++.+.                   ......+.+|+++||++|++++|+.++++++||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            455799999999999987652                   1233457889999999999999999999999999999999


Q ss_pred             HhcCcccccCCCccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCC-Cc
Q 047291          104 KTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKG-AS  182 (511)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~-~~  182 (511)
                      .++.. +..++...........+ +.+++.+|+.|+++|+. +.+.|++.+++.+.+.+.+.++.+++.+.+...++ ..
T Consensus       120 ~~~~~-~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKYNT-VTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHI-AAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcCCC-CCCCcchhhhHHHHHhc-CCccccCchHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            87633 33343221111111112 23556679999999999 57899999999999999999999999998754333 57


Q ss_pred             eeHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHH
Q 047291          183 VNLSEMLLTVTNDTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDV  262 (511)
Q Consensus       183 vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  262 (511)
                      +|+.++++.++++++++++||.++...+++...................+|++.+++  .+..+..++..+.+.+++.+.
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~~~~~~~~~~~~~~~  274 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREIKSLKGEVERLLMEI  274 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988654444444433332221111112234333321  122344566777888999999


Q ss_pred             HHHHHhccCCC-CccccccHHHHHHHhcccc-ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHH
Q 047291          263 IAEHRNLERPD-DKSVAKDFVDILLQVQKDA-TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQ  340 (511)
Q Consensus       263 i~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~-~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr  340 (511)
                      ++++++..+.+ ......|+++.++++..+. .....++++++.+++.++++||+|||+++++|++++|++||++|+|+|
T Consensus       275 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~  354 (516)
T PLN02290        275 IQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVR  354 (516)
T ss_pred             HHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            98887643221 1123579999999764322 112358899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCC-CC
Q 047291          341 EEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLW-DN  419 (511)
Q Consensus       341 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~  419 (511)
                      +||+++++++ .++.+++++||||+|||+||||++|+++. .+|.+.+|++++||.|||||.|+++.+++|+||++| +|
T Consensus       355 ~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~d  432 (516)
T PLN02290        355 AEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKD  432 (516)
T ss_pred             HHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCC
Confidence            9999999865 78999999999999999999999999986 579999999999999999999999999999999999 89


Q ss_pred             CCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceeccc
Q 047291          420 PEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKK  499 (511)
Q Consensus       420 p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (511)
                      |++|+||||++++.   ..+..++|||.|+|.|+|++||++|++++++.|+++|++++.++..     .....+++..|+
T Consensus       433 P~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~~~~~~~~~p~  504 (516)
T PLN02290        433 ANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HAPVVVLTIKPK  504 (516)
T ss_pred             hhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cCccceeeecCC
Confidence            99999999995421   1345799999999999999999999999999999999999876532     112235778999


Q ss_pred             CceeEEeeccC
Q 047291          500 IPLYLVPVMYS  510 (511)
Q Consensus       500 ~~~~~~~~~r~  510 (511)
                      +++.+++++|+
T Consensus       505 ~~~~~~~~~~~  515 (516)
T PLN02290        505 YGVQVCLKPLN  515 (516)
T ss_pred             CCCeEEEEeCC
Confidence            99999999986


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.2e-74  Score=559.35  Aligned_cols=450  Identities=28%  Similarity=0.455  Sum_probs=360.8

Q ss_pred             CCCCCCCCcccccccCC-CCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccC
Q 047291           47 PPCPPKLPIIGNLHQLG-NLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYG  125 (511)
Q Consensus        47 ~pgp~~~p~iG~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~  125 (511)
                      ||||+++|++||++.+. .+++..+.+++++||++|++++++.++++|+||+++++|+.++...|..++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999998884 45889999999999999999999999999999999999999888777776544333323222


Q ss_pred             CceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhcc--CCCceeHHHHHHHHHHHhhhhhhcc
Q 047291          126 CIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASL--KGASVNLSEMLLTVTNDTVGRCVFG  203 (511)
Q Consensus       126 ~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~~vdl~~~~~~~~~~~~~~~~fG  203 (511)
                      +....+..+|+.|+++|+.+.+++++...++.+.+.+.+.++.+++.+.+...  +++.+|+.++++.+++++++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22234445699999999987888999888899999999999999988876533  3577999999999999999999999


Q ss_pred             ccccch--h----------hHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 047291          204 KKANEE--S----------KFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLER  271 (511)
Q Consensus       204 ~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (511)
                      .+++..  +          .+......+........+.+.+|.+.|+.. ....+...+....+.+++..+++++++...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            986531  1          122222333222222233456666555421 112222333344556777788877765432


Q ss_pred             CCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCC
Q 047291          272 PDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKL  351 (511)
Q Consensus       272 ~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  351 (511)
                      .+  ....|+++.+++..      ..++++++.++++++++||+|||+++++|++++|++||++|+|+|+||+++++.+.
T Consensus       240 ~~--~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~  311 (466)
T PLN02655        240 RG--EERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER  311 (466)
T ss_pred             CC--CCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC
Confidence            22  23468999999753      24899999999999999999999999999999999999999999999999998654


Q ss_pred             cCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCC
Q 047291          352 KVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNN  431 (511)
Q Consensus       352 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  431 (511)
                       ++.++++++|||+||++||||++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||+++
T Consensus       312 -~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~  390 (466)
T PLN02655        312 -VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGE  390 (466)
T ss_pred             -CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCC
Confidence             8999999999999999999999999999878999999999999999999999999999999999999999999999976


Q ss_pred             CCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccCC
Q 047291          432 PVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYSA  511 (511)
Q Consensus       432 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  511 (511)
                      ... ......++|||+|+|.|||++||..|++++++.||++|++++.++...    .....+++..+++++.+++++|+.
T Consensus       391 ~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        391 KYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEE----KEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             Ccc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCcc----ccchhheeEeecCCcEEEEeecCC
Confidence            422 123468999999999999999999999999999999999998765321    223457778899999999999874


No 15 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.4e-73  Score=554.95  Aligned_cols=451  Identities=29%  Similarity=0.484  Sum_probs=359.9

Q ss_pred             CCCCCCCCCCCCcccccccCCC---CCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCcc-c
Q 047291           43 NHNLPPCPPKLPIIGNLHQLGN---LPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTT-A  118 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~~~---~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~-~  118 (511)
                      ....+|||.++|++|++..+..   +...++.++..+||++|+.++++.++++++||+.+++|+.++.....+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            5678999999999999988832   46678899999999999999999999999999999999976655555554444 3


Q ss_pred             hhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhh
Q 047291          119 ADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVG  198 (511)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~  198 (511)
                      ...+.  |.+.+++. |+.|+++|++ +.+.|+...++.+...+.+....+...+..... ++.+|+.+.++++++|+++
T Consensus       113 ~~~~l--G~gll~~~-g~~W~~~Rk~-~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPWL--GDGLLFSD-GEKWHKHRKL-LTPAFHFEILKSFVPVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHh--cCccccCC-chHHHHHHhh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHH
Confidence            32322  33555555 9999999999 689999999999999999988888887776432 3339999999999999999


Q ss_pred             hhhccccc-c-chhhHHHHHHHHHHhccccccccccc-cchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 047291          199 RCVFGKKA-N-EESKFGTISRRLTTQLQAFSFGDVFP-ALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDK  275 (511)
Q Consensus       199 ~~~fG~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  275 (511)
                      .++||... + ...+.....+.+.............| +..++..+ +..++.+++.+.+.+++++.|+++++....+..
T Consensus       188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~  266 (497)
T KOG0157|consen  188 KTAMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGL-KSERKLKKARKILHDFLEKIIRERREELEKEGS  266 (497)
T ss_pred             HHhcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999222 2 12222233333332222222333344 33333332 256778899999999999999999875432211


Q ss_pred             ---cccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCc
Q 047291          276 ---SVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLK  352 (511)
Q Consensus       276 ---~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  352 (511)
                         ....|+++.+.....     ..++++++++++.++++||+|||+++++|++++|+.||++|+|+++|++++++++..
T Consensus       267 ~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~  341 (497)
T KOG0157|consen  267 GEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDD  341 (497)
T ss_pred             cccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCC
Confidence               345677775332211     469999999999999999999999999999999999999999999999999975433


Q ss_pred             -CCcccccCchhHHHHHhhhcCCCCCCccccccccCCccee-cCeeeCCCcEEEeehHHhhcCCCCCC-CCCCCCCCCcC
Q 047291          353 -VEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM-GGYEIPAKTRVFANAWAIQRDPKLWD-NPEEFIPERFY  429 (511)
Q Consensus       353 -~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~p~R~~  429 (511)
                       .+..+.++|+||++||+|||||||++|... |.+.+|+++ +||.||||+.|.++++++|||+++|+ ||++|+||||+
T Consensus       342 ~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~  420 (497)
T KOG0157|consen  342 KWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFL  420 (497)
T ss_pred             CCChhhhhhhHHHHHHHHHHhccCCCCchhh-cccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccC
Confidence             333444469999999999999999999987 999999999 58999999999999999999999995 99999999999


Q ss_pred             CCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          430 NNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       430 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      ++......+++.|+|||+|+|.|+|++||++|||+++++++++|++++..+..     ....+..++++++++.|++++|
T Consensus       421 ~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v~~~~r  495 (497)
T KOG0157|consen  421 DGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKVKLRPR  495 (497)
T ss_pred             CCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEEEEEeC
Confidence            76544345678999999999999999999999999999999999999876532     4456788999999999999999


Q ss_pred             C
Q 047291          510 S  510 (511)
Q Consensus       510 ~  510 (511)
                      .
T Consensus       496 ~  496 (497)
T KOG0157|consen  496 G  496 (497)
T ss_pred             C
Confidence            6


No 16 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-73  Score=519.81  Aligned_cols=447  Identities=23%  Similarity=0.354  Sum_probs=371.1

Q ss_pred             CCCCCCCCCCCcccccccC----CCCCcHHHHHHHHhhCCcEEEe-ecCcCEEEecCHHHHHHHHHhcCcccccCC-Ccc
Q 047291           44 HNLPPCPPKLPIIGNLHQL----GNLPHRSLRALSKKYGPLMLIH-WGQTPTVIVSSADMAKEMMKTHDIIFSNRP-KTT  117 (511)
Q Consensus        44 ~~~~pgp~~~p~iG~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~-~~~  117 (511)
                      ...+|||.++|++|.++.+    ..+.++...+.++|||+||+.. +|+.+.|.|.+|++++.+++..+ .++.++ ...
T Consensus        49 ~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~  127 (519)
T KOG0159|consen   49 FEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIE  127 (519)
T ss_pred             hhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccc
Confidence            4468999999999998843    3567788899999999999999 89999999999999999999654 346664 111


Q ss_pred             --chhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhcc---CCCceeHHHHHHHH
Q 047291          118 --AADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASL---KGASVNLSEMLLTV  192 (511)
Q Consensus       118 --~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~---~~~~vdl~~~~~~~  192 (511)
                        ....-.+++..++++.+|++|++.|..+.+.+++++.++.|.+.+++++++++..++...+   +..+.|+.+.+.++
T Consensus       128 ~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~w  207 (519)
T KOG0159|consen  128 PWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRW  207 (519)
T ss_pred             hhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence              1112233455677788899999999999888999999999999999999999999988755   33567999999999


Q ss_pred             HHHhhhhhhccccccc--------hhhHHHHHHHHHHhccccccccccc-cchhhhhccCchHHHHHHHHHHHHHHHHHH
Q 047291          193 TNDTVGRCVFGKKANE--------ESKFGTISRRLTTQLQAFSFGDVFP-ALGWMDHLTGLIPCVKATFRSLDAFFDDVI  263 (511)
Q Consensus       193 ~~~~~~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i  263 (511)
                      ++++++.++||.+++-        .+.+..+++.++.....+.   ..| +++++.  ++..++..++.+.+.++.+..|
T Consensus       208 slEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~~--t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  208 SLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYFP--TKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhCC--ChHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999871        1356666666655543322   223 333332  3566778888899999999999


Q ss_pred             HHHHhccCCCCcc--cc-ccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHH
Q 047291          264 AEHRNLERPDDKS--VA-KDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQ  340 (511)
Q Consensus       264 ~~~~~~~~~~~~~--~~-~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr  340 (511)
                      +++.++.+.+...  +. ..+...|.+        +.++.+++..+++++++||+|||++++.|++|+|++||++|++|+
T Consensus       283 d~~l~~l~~~~~~~~~~~~~l~~~L~~--------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~  354 (519)
T KOG0159|consen  283 DNALEELEKQDSAGSEYTGSLLELLLR--------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR  354 (519)
T ss_pred             HHHHHHHHhccccccchhHHHHHHHHH--------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence            8887765433221  22 333444443        248899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcC-CCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCC
Q 047291          341 EEVRRVVGK-KLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDN  419 (511)
Q Consensus       341 ~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~  419 (511)
                      +|+.++.+. +..++.+++.++|||.||||||+||||.+|... |+..+|.+++||.|||||.|.++.+.+.+||+.|++
T Consensus       355 ~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~  433 (519)
T KOG0159|consen  355 EEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPD  433 (519)
T ss_pred             HHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhCCC
Confidence            999999987 567888999999999999999999999999987 999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceeccc
Q 047291          420 PEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKK  499 (511)
Q Consensus       420 p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (511)
                      |++|+||||++++. ...++..++|||.|+|+|+||.||.+||.++||.++++|+++..++.+     ....+.+++.|.
T Consensus       434 p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p-----v~~~~~~il~P~  507 (519)
T KOG0159|consen  434 PEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP-----VEYVYRFILVPN  507 (519)
T ss_pred             ccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC-----ccceeEEEEcCC
Confidence            99999999999864 345889999999999999999999999999999999999999877532     445566778899


Q ss_pred             CceeEEeeccCC
Q 047291          500 IPLYLVPVMYSA  511 (511)
Q Consensus       500 ~~~~~~~~~r~~  511 (511)
                      .++.++.++|..
T Consensus       508 ~~l~f~f~~r~~  519 (519)
T KOG0159|consen  508 RPLRFKFRPRNE  519 (519)
T ss_pred             CCcceeeeeCCC
Confidence            999999998863


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=9.3e-72  Score=547.68  Aligned_cols=462  Identities=24%  Similarity=0.444  Sum_probs=350.8

Q ss_pred             CCCCCCCCCCCcccccccCC-CCCc-HHHHHHHHhh-CCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchh
Q 047291           44 HNLPPCPPKLPIIGNLHQLG-NLPH-RSLRALSKKY-GPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAAD  120 (511)
Q Consensus        44 ~~~~pgp~~~p~iG~~~~~~-~~~~-~~~~~~~~ky-G~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~  120 (511)
                      .+.||||+++|++|+++.+. ..+. .++.+..++| |+||++++|++++|+|+||+++++++.++...|+.++......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            34689999999999998873 2333 4566777776 7999999999999999999999999998877788776544444


Q ss_pred             hhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhh
Q 047291          121 IFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRC  200 (511)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~  200 (511)
                      ....++.+.+++.+|+.|+++|+.+.+.+++......+.+....+++.+++.+.+...++.++|+.++++.+++++++++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            33322334566667999999999965444555555566667777888999998765444567999999999999999999


Q ss_pred             hccccccc-------hhhHHH----HHHHHHHhcc---ccccccccc-cchhhhhccCchHHHHHHHHHHHHHHHHHHHH
Q 047291          201 VFGKKANE-------ESKFGT----ISRRLTTQLQ---AFSFGDVFP-ALGWMDHLTGLIPCVKATFRSLDAFFDDVIAE  265 (511)
Q Consensus       201 ~fG~~~~~-------~~~~~~----~~~~~~~~~~---~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~  265 (511)
                      +||.+++.       +..+..    ..........   .....+.+| ++.++ .+.+...+.......+.+++++.+++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~  277 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGW-NIDGQEERAKVNVNLVRSYNNPIIDE  277 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhh-cccchHHHHHHHHHHHHHHHHHHHHH
Confidence            99998642       111111    1111111111   111112222 22211 01122233445566788888888888


Q ss_pred             HHhccCCC-CccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 047291          266 HRNLERPD-DKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVR  344 (511)
Q Consensus       266 ~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  344 (511)
                      +++..... ......|+++.+++...+.+ ...++++++++++.++++||+|||+.+++|++++|++||++|+|+++||+
T Consensus       278 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  356 (534)
T PLN03018        278 RVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELD  356 (534)
T ss_pred             HHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            76532111 11234689999997653322 11489999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCC
Q 047291          345 RVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFI  424 (511)
Q Consensus       345 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  424 (511)
                      ++++.++.++.+++.+||||+||++|+||++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+
T Consensus       357 ~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~  436 (534)
T PLN03018        357 EVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYE  436 (534)
T ss_pred             HHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccC
Confidence            99987777899999999999999999999999999887799999999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCCC-----CCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceeccc
Q 047291          425 PERFYNNPVNF-----MGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKK  499 (511)
Q Consensus       425 p~R~~~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (511)
                      ||||++++...     ...+..++|||+|+|.|+|++||.+|+++++|+|+++|++++.++..  +++.....+.+. .+
T Consensus       437 PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~-~p  513 (534)
T PLN03018        437 PERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDDASLL-MA  513 (534)
T ss_pred             CccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCcccccccee-cC
Confidence            99999654221     12456899999999999999999999999999999999999865431  233333335444 55


Q ss_pred             CceeEEeeccC
Q 047291          500 IPLYLVPVMYS  510 (511)
Q Consensus       500 ~~~~~~~~~r~  510 (511)
                      .++.+++++|.
T Consensus       514 ~~~~v~~~~R~  524 (534)
T PLN03018        514 KPLLLSVEPRL  524 (534)
T ss_pred             CCeEEEEEecc
Confidence            79999999985


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=4.7e-72  Score=550.25  Aligned_cols=435  Identities=20%  Similarity=0.314  Sum_probs=335.2

Q ss_pred             CCCCCCCCCCCCCCcccccccCC-----CCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCC
Q 047291           41 GGNHNLPPCPPKLPIIGNLHQLG-----NLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPK  115 (511)
Q Consensus        41 ~~~~~~~pgp~~~p~iG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~  115 (511)
                      .++.+.||||+++|++||++.+.     +.++.++.+++++||++|++++|++++|+++||+++++|+.+++..|..+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            34567899999999999976431     3456788999999999999999999999999999999999877666643322


Q ss_pred             ccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhh-hHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHH
Q 047291          116 TTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQY-FQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTN  194 (511)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~  194 (511)
                      ......+  ++ ..++..+|+.|+++|+.+ .+.|++..++. +.+.+.+.+..+++.+..    +..+|+.+.++.+++
T Consensus       114 ~~~~~~~--g~-~~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~~~~~~~~  185 (490)
T PLN02500        114 RSIGGIL--GK-WSMLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWKE----NSTFSAQDEAKKFTF  185 (490)
T ss_pred             hHHHHHh--Cc-ccccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCC----CCCEEehHHHHHHHH
Confidence            1111111  22 234455799999999994 68899888876 466777777777666532    457999999999999


Q ss_pred             Hhhhhhhccccccch--hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 047291          195 DTVGRCVFGKKANEE--SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERP  272 (511)
Q Consensus       195 ~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (511)
                      +++++++||.+.++.  +++...+.........  ....+|..        ..++..++.+.+.+++.+.++++++..+.
T Consensus       186 ~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  255 (490)
T PLN02500        186 NLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS--APLNFPGT--------AYRKALKSRATILKFIERKMEERIEKLKE  255 (490)
T ss_pred             HHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc--chhcCCCc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            999999999876432  2222222222221110  00112211        12344566788888888888887654322


Q ss_pred             CC-ccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhc---
Q 047291          273 DD-KSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVG---  348 (511)
Q Consensus       273 ~~-~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~---  348 (511)
                      +. .....|+++.+++.       ..++++++++++.++++||+|||+++++|++++|++||++|+|+++||+++.+   
T Consensus       256 ~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~  328 (490)
T PLN02500        256 EDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKK  328 (490)
T ss_pred             ccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccc
Confidence            11 12346899998873       24899999999999999999999999999999999999999999999999874   


Q ss_pred             --CCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCC
Q 047291          349 --KKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPE  426 (511)
Q Consensus       349 --~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  426 (511)
                        .++.++.+|+++|||++|||+||||++|+++.. +|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||
T Consensus       329 ~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~Pe  407 (490)
T PLN02500        329 QSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPW  407 (490)
T ss_pred             cCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChh
Confidence              234578999999999999999999999999986 59999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCCCC------CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccC
Q 047291          427 RFYNNPVNFM------GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKI  500 (511)
Q Consensus       427 R~~~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (511)
                      ||++++....      ..+..++|||+|+|.|+|++||.+|+++++|+|+++|+|++.++...    ..  +.. ..+++
T Consensus       408 Rfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~----~~--~~~-~~~~~  480 (490)
T PLN02500        408 RWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA----FA--FPF-VDFPK  480 (490)
T ss_pred             hccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc----ee--ccc-ccCCC
Confidence            9997542211      24568999999999999999999999999999999999998765321    11  112 24456


Q ss_pred             ceeEEeec
Q 047291          501 PLYLVPVM  508 (511)
Q Consensus       501 ~~~~~~~~  508 (511)
                      ++.+++.+
T Consensus       481 ~l~~~~~~  488 (490)
T PLN02500        481 GLPIRVRR  488 (490)
T ss_pred             CceEEEEe
Confidence            88888765


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=8.1e-72  Score=544.03  Aligned_cols=435  Identities=17%  Similarity=0.247  Sum_probs=340.9

Q ss_pred             HhhCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCcc
Q 047291           38 FIKGGNHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTT  117 (511)
Q Consensus        38 ~~~~~~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~  117 (511)
                      ..+..+.+.||||+++|++||++.+..++..++.+++++||++|++++++.++++++||+++++|+.++...+.......
T Consensus        24 ~~~~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  103 (463)
T PLN02774         24 EVRYSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQS  103 (463)
T ss_pred             hhccCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHH
Confidence            34445567789999999999998886677889999999999999999999999999999999999987665553322211


Q ss_pred             chhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhh-hHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHh
Q 047291          118 AADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQY-FQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDT  196 (511)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~  196 (511)
                      ....  .|+ +++++.+|+.|+++|+.+ .+.|++..++. +.+.+.+.+++++++|..    ++++|+.+.++.+++++
T Consensus       104 ~~~~--lg~-~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~  175 (463)
T PLN02774        104 MLDI--LGT-CNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLS  175 (463)
T ss_pred             HHHH--hCc-cchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHH
Confidence            1122  222 344556799999999995 78899998875 788888888888777642    36799999999999999


Q ss_pred             hhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 047291          197 VGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKS  276 (511)
Q Consensus       197 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  276 (511)
                      ++.++||.+.+..  .......+........   .+|.  +++.  ...++..++.+.+.+++.+.++++++.     ..
T Consensus       176 ~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~---~~~~--~lp~--~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~  241 (463)
T PLN02774        176 ALKQIAGTLSKPI--SEEFKTEFFKLVLGTL---SLPI--DLPG--TNYRSGVQARKNIVRMLRQLIQERRAS-----GE  241 (463)
T ss_pred             HHHHHcCCCChHH--HHHHHHHHHHHhcccc---cCCc--CCCC--hhhhHHHHHHHHHHHHHHHHHHHHHhc-----CC
Confidence            9999999865421  1112222222211100   1111  1100  112345567888889999998887643     22


Q ss_pred             ccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcC---CCcC
Q 047291          277 VAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGK---KLKV  353 (511)
Q Consensus       277 ~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~~  353 (511)
                      ..+|+++.+++...+   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++.+.   +..+
T Consensus       242 ~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~  318 (463)
T PLN02774        242 THTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPI  318 (463)
T ss_pred             CcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCC
Confidence            347999999874322   2358999999999999999999999999999999999999999999999999864   3457


Q ss_pred             CcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCC
Q 047291          354 EASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPV  433 (511)
Q Consensus       354 ~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~  433 (511)
                      +.++++++|||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++++.
T Consensus       319 ~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~  397 (463)
T PLN02774        319 DWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL  397 (463)
T ss_pred             CHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc
Confidence            8999999999999999999999999866 499999999999999999999999999999999999999999999997542


Q ss_pred             CCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeec
Q 047291          434 NFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVM  508 (511)
Q Consensus       434 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (511)
                      +   ....++|||+|+|.|||++||.+|++++++.|+++|++++.++....     .  ..+..|++++.+++++
T Consensus       398 ~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~-----~--~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        398 E---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM-----K--FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             C---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc-----c--CCCCCCCCCceEEeee
Confidence            1   12369999999999999999999999999999999999987653211     1  1234478888888764


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.4e-71  Score=548.74  Aligned_cols=450  Identities=19%  Similarity=0.269  Sum_probs=339.8

Q ss_pred             CCCCCCCCCcccccccCCCCCcHHHHHHHHhh---CCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhh
Q 047291           46 LPPCPPKLPIIGNLHQLGNLPHRSLRALSKKY---GPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIF  122 (511)
Q Consensus        46 ~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~  122 (511)
                      .+|||+++|++||++.+..+ +..+.++.++|   |++|++++++.+.++++||+++++|+.++...|.....+......
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~  109 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV  109 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence            47899999999998765433 44567777788   899999999999999999999999998764445443222111111


Q ss_pred             ccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHH-HHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhh
Q 047291          123 LYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVR-DEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCV  201 (511)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~  201 (511)
                      .. + +.+++.+|+.|+++|+. +.+.|+.++++.+.+.+ .+.++.+.+.+.+...+++.+|+.++++.+++++++.++
T Consensus       110 ~~-g-~~l~~~~g~~w~~~Rr~-l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        110 LL-G-DGIFNVDGELWRKQRKT-ASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             Hh-c-CeeeccCcHHHHHHHHh-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence            11 2 33566789999999999 58889999999998876 666777777776543446789999999999999999999


Q ss_pred             ccccccch------hhHHHHHHHHHHhccccccccccccchhhhhc-cCchHHHHHHHHHHHHHHHHHHHHHHhccCCC-
Q 047291          202 FGKKANEE------SKFGTISRRLTTQLQAFSFGDVFPALGWMDHL-TGLIPCVKATFRSLDAFFDDVIAEHRNLERPD-  273 (511)
Q Consensus       202 fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  273 (511)
                      ||.+++..      ..+...+........   .....|.+.....+ ....+...+..+.+.+++.+.++++++....+ 
T Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  263 (516)
T PLN03195        187 FGVEIGTLSPSLPENPFAQAFDTANIIVT---LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEAR  263 (516)
T ss_pred             hCCCccccccCCCccHHHHHHHHHHHHHH---HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99987531      134333332221110   00011211110001 11123345677788888888888776543211 


Q ss_pred             --CccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcC--
Q 047291          274 --DKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGK--  349 (511)
Q Consensus       274 --~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~--  349 (511)
                        .....+|+++.++++..+.  +..+++++++++++++++||+|||+++++|++|+|++||++|+||++||+++.++  
T Consensus       264 ~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  341 (516)
T PLN03195        264 KSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERA  341 (516)
T ss_pred             cccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccc
Confidence              0123568999999764322  2369999999999999999999999999999999999999999999999998643  


Q ss_pred             ------------------CCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCccee-cCeeeCCCcEEEeehHHh
Q 047291          350 ------------------KLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM-GGYEIPAKTRVFANAWAI  410 (511)
Q Consensus       350 ------------------~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~  410 (511)
                                        ++.++.+++++||||+|||+||||++|+++... |.+.+|.++ +||.||||+.|.++.+.+
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~  420 (516)
T PLN03195        342 KEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSM  420 (516)
T ss_pred             ccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHhh
Confidence                              235788999999999999999999999999986 656666555 999999999999999999


Q ss_pred             hcCCCCC-CCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCc
Q 047291          411 QRDPKLW-DNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMT  489 (511)
Q Consensus       411 ~~d~~~~-~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  489 (511)
                      |+||++| +||++|+||||++++......+..++|||+|+|.|+|++||++|+++++|.|+++|++++.++..   ..  
T Consensus       421 h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~--  495 (516)
T PLN03195        421 GRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP---VK--  495 (516)
T ss_pred             ccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc---ce--
Confidence            9999999 99999999999964321122456799999999999999999999999999999999999865421   22  


Q ss_pred             cccCceecccCceeEEeeccC
Q 047291          490 ETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      .....+..|+.++.|++++|.
T Consensus       496 ~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        496 YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeeeeEEecCCCEEEEEEeCC
Confidence            233445789999999999884


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.2e-72  Score=557.49  Aligned_cols=449  Identities=33%  Similarity=0.567  Sum_probs=358.1

Q ss_pred             CCCCCCCCcccccccCC--CCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhh--h
Q 047291           47 PPCPPKLPIIGNLHQLG--NLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADI--F  122 (511)
Q Consensus        47 ~pgp~~~p~iG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~--~  122 (511)
                      ||||+++|++||+..+.  ++++.++.++++|||+||++++++.++++|+||+++++|+.++...+..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999885  6788899999999999999999999999999999999999987666655433222222  1


Q ss_pred             ccCCceeEecCCchhHHHHHHHhhhccCChh-HHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhh
Q 047291          123 LYGCIDIAFSPYGEYWREIRRIGVHELLSPQ-RVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCV  201 (511)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~  201 (511)
                      ...+ ..++..+++.|+.+|+. +.+.|+.. .+ .+.+.+.+.++.+++.+.+....++.+|+.++++.+++++++.++
T Consensus        81 ~~~~-~~l~~~~~~~~~~~R~~-~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGG-KGLFFSDGERWRRQRRL-LAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTT-TSSTTSSHHHHHHHHHH-HHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             cccc-ccccccccccccccccc-ccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            1223 34555668999999999 46677776 66 899999999999999999976655679999999999999999999


Q ss_pred             ccccccc--h---hhHHHHHHHHHHhccc--cccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 047291          202 FGKKANE--E---SKFGTISRRLTTQLQA--FSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDD  274 (511)
Q Consensus       202 fG~~~~~--~---~~~~~~~~~~~~~~~~--~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  274 (511)
                      ||.+++.  +   .++.............  ..+...+|++.++.  ....+...++.+.+.+++...++++++..... 
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  234 (463)
T PF00067_consen  158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP--TPLFRRFKRARDRLRKYIKEIIEERREELDDG-  234 (463)
T ss_dssp             HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS-
T ss_pred             ccceeeecccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccc-
Confidence            9998761  1   1344444444332211  12333445333321  12345566677888999999999988765332 


Q ss_pred             ccccccHHHHHHHhc-cccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcC
Q 047291          275 KSVAKDFVDILLQVQ-KDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKV  353 (511)
Q Consensus       275 ~~~~~~~~~~ll~~~-~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  353 (511)
                      .....|+++.+++.. ...+ +.++++++++++++.+++||+|||+.+++|++++|++||++|++|++||+++.++++.+
T Consensus       235 ~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  313 (463)
T PF00067_consen  235 DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREI  313 (463)
T ss_dssp             SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSH
T ss_pred             cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            245789999999886 2222 13799999999999999999999999999999999999999999999999999777778


Q ss_pred             CcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCC
Q 047291          354 EASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPV  433 (511)
Q Consensus       354 ~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~  433 (511)
                      +.+++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++.+.
T Consensus       314 ~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~  393 (463)
T PF00067_consen  314 TFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG  393 (463)
T ss_dssp             HHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999666799999999999999999999999999999999999999999999999865


Q ss_pred             CCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEE
Q 047291          434 NFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLV  505 (511)
Q Consensus       434 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (511)
                      .....+..++|||.|+|.|+|++||+.|+++++|.||++|||++.++....+  .....+ ...|+.+++|+
T Consensus       394 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~  462 (463)
T PF00067_consen  394 ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP--QEQQNG-FLLPPKPLKVK  462 (463)
T ss_dssp             TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE--EECSCS-SSEEESSSEEE
T ss_pred             ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC--ccccCc-eEeeCCCcEEe
Confidence            3335678999999999999999999999999999999999999976543221  111113 34555566554


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.5e-70  Score=535.91  Aligned_cols=446  Identities=16%  Similarity=0.294  Sum_probs=338.1

Q ss_pred             CCCCCCCCCCcccccccCCCCCc---HHHHHHHHhhCCcEE---EeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc
Q 047291           45 NLPPCPPKLPIIGNLHQLGNLPH---RSLRALSKKYGPLML---IHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA  118 (511)
Q Consensus        45 ~~~pgp~~~p~iG~~~~~~~~~~---~~~~~~~~kyG~v~~---~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~  118 (511)
                      +..|||+++|++|++..+..+..   +.+.+..++||..++   +++|+.++++|+||+++++|+.++...|+++.....
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            35889999999999876632222   334444445887665   577899999999999999999887666665432222


Q ss_pred             hhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhh--hHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHh
Q 047291          119 ADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQY--FQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDT  196 (511)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~  196 (511)
                      ...  ..+ +++++.+|+.|+++|+. +.+.|+...+..  +.+.+.+.++.+++.+.+.+.++..+|+.+.+.++++|+
T Consensus       111 ~~~--~~g-~gl~~~~g~~Wr~~Rk~-l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dv  186 (500)
T PLN02169        111 IFD--VLG-EGILTVDFELWEDLRKS-NHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDT  186 (500)
T ss_pred             HHH--hhc-CcccccCcHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHH
Confidence            111  113 34556679999999999 579999887764  346677778888888876555567899999999999999


Q ss_pred             hhhhhccccccch------hhHHHHHHHHHHhccccccccccccchh-h-hhc-cCchHHHHHHHHHHHHHHHHHHHHHH
Q 047291          197 VGRCVFGKKANEE------SKFGTISRRLTTQLQAFSFGDVFPALGW-M-DHL-TGLIPCVKATFRSLDAFFDDVIAEHR  267 (511)
Q Consensus       197 ~~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p~l~~-l-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~  267 (511)
                      ++.++||.+.+..      .++...........   ......|++.+ + ..+ .+..++..++.+.+.+++.+.|++++
T Consensus       187 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~  263 (500)
T PLN02169        187 SSILMTGYDPMSLSIEMLEVEFGEAADIGEEAI---YYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRR  263 (500)
T ss_pred             HHhheeCCCccccCCCCCCCHHHHHHHHHHHHH---HhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999876421      23444333322211   11122343221 1 111 13345677888999999999999887


Q ss_pred             hccCCC--CccccccHHHHHHHhcccccc-ccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 047291          268 NLERPD--DKSVAKDFVDILLQVQKDATT-KHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVR  344 (511)
Q Consensus       268 ~~~~~~--~~~~~~~~~~~ll~~~~~~~~-~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  344 (511)
                      +.....  .++..+|+++.+++...+... ...++++++.+++.++++||+|||+++++|++|+|++||++|+|+++||+
T Consensus       264 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~  343 (500)
T PLN02169        264 KEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEIN  343 (500)
T ss_pred             HHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            542111  012246899999976432111 12478899999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCc-ceecCeeeCCCcEEEeehHHhhcCCCCC-CCCCC
Q 047291          345 RVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSS-VKMGGYEIPAKTRVFANAWAIQRDPKLW-DNPEE  422 (511)
Q Consensus       345 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d-~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~  422 (511)
                      +++      +.+++++||||+||++||||++|++|... |.+.+| +.++||.||||+.|+++.+++||||++| +||++
T Consensus       344 ~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~  416 (500)
T PLN02169        344 TKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALD  416 (500)
T ss_pred             hhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhh
Confidence            873      56899999999999999999999999987 665555 4459999999999999999999999999 89999


Q ss_pred             CCCCCcCCCCCCCC-CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCc
Q 047291          423 FIPERFYNNPVNFM-GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIP  501 (511)
Q Consensus       423 F~p~R~~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (511)
                      |+||||++++.+.. ..+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++..     .....+.++.|+++
T Consensus       417 F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~g  491 (500)
T PLN02169        417 FKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHK-----IEAIPSILLRMKHG  491 (500)
T ss_pred             cCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCC-----cccccceEEecCCC
Confidence            99999997543321 2367899999999999999999999999999999999999875432     23345677899999


Q ss_pred             eeEEeecc
Q 047291          502 LYLVPVMY  509 (511)
Q Consensus       502 ~~~~~~~r  509 (511)
                      +.+++++|
T Consensus       492 l~l~l~~~  499 (500)
T PLN02169        492 LKVTVTKK  499 (500)
T ss_pred             EEEEEEeC
Confidence            99999987


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.9e-70  Score=543.67  Aligned_cols=438  Identities=24%  Similarity=0.401  Sum_probs=336.2

Q ss_pred             cccccC-CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCc
Q 047291           57 GNLHQL-GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYG  135 (511)
Q Consensus        57 G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (511)
                      |++..+ .+..+..+.++++|||+||++++|..++++|+||+.+++|+.++...|.+..........  .+ ..+++.++
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g-~~l~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MG-KGLIPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cC-CceecCCc
Confidence            333344 455678899999999999999999889999999999999998776656554322111111  12 23456679


Q ss_pred             hhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhccccccc---hhhH
Q 047291          136 EYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGKKANE---ESKF  212 (511)
Q Consensus       136 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~---~~~~  212 (511)
                      +.|+.+|+. +.+.|+...++.+.+.+.+.++.+++.+.+...+++.+|+.+.++.+++|+++.++||.+++.   ++++
T Consensus       220 e~wr~rRr~-l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~  298 (633)
T PLN02738        220 EIWRVRRRA-IVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGI  298 (633)
T ss_pred             HHHHHHHHh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHH
Confidence            999999999 688999999999999999999999999987666678999999999999999999999998863   2233


Q ss_pred             HHHHHHHHHhccccccccccccch-hhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC-------C-CccccccHHH
Q 047291          213 GTISRRLTTQLQAFSFGDVFPALG-WMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERP-------D-DKSVAKDFVD  283 (511)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~p~l~-~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~-~~~~~~~~~~  283 (511)
                      ...+..............+.++.. .+..+....++..+..+.+.++...+++.+++..++       . ......|+++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~  378 (633)
T PLN02738        299 VEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILH  378 (633)
T ss_pred             HHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHH
Confidence            333332222111101111111111 111111222334445555666666665544321110       0 0123458899


Q ss_pred             HHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchh
Q 047291          284 ILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEY  363 (511)
Q Consensus       284 ~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~  363 (511)
                      .|++..      ..++++++.++++.+++||+|||+.+++|++|+|++||++|+|||+||++++++ ..++.+++++|||
T Consensus       379 ~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPY  451 (633)
T PLN02738        379 FLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKY  451 (633)
T ss_pred             HHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHH
Confidence            888652      248999999999999999999999999999999999999999999999999874 5688999999999


Q ss_pred             HHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCC--CCCCCCcc
Q 047291          364 LKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPV--NFMGEDFH  441 (511)
Q Consensus       364 l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~--~~~~~~~~  441 (511)
                      |+|||+|+||++|+++... |.+.+|.+++||.|||||.|.++.+.+||||++|+||++|+||||+.++.  ........
T Consensus       452 L~AVIkEtLRL~p~~p~~~-R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~  530 (633)
T PLN02738        452 TTRVINESLRLYPQPPVLI-RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFS  530 (633)
T ss_pred             HHHHHHHHHhcCCCccccc-eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCc
Confidence            9999999999999999965 88999999999999999999999999999999999999999999985422  11224568


Q ss_pred             eeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          442 YIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       442 ~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ++|||.|+|.|+|++||++|+++++|.|+++|+|++.++..  +  .....+.+..+++++.+++++|.
T Consensus       531 ~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~--~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        531 YLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--P--VKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             eeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--C--cccccceEEeeCCCcEEEEEECC
Confidence            99999999999999999999999999999999999876532  1  22334567788999999999885


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=4.5e-70  Score=531.26  Aligned_cols=426  Identities=21%  Similarity=0.360  Sum_probs=342.4

Q ss_pred             CCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchh
Q 047291           42 GNHNLPPCPPKLPIIGNLHQL-GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAAD  120 (511)
Q Consensus        42 ~~~~~~pgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~  120 (511)
                      .+.+.||||+++|++|++..+ ..+++.++.+++++||++++++++++++|+++||+++++|+.++...+.  +......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHH
Confidence            456678888889999998765 5788999999999999999999999999999999999999987766552  2222221


Q ss_pred             hhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhh
Q 047291          121 IFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRC  200 (511)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~  200 (511)
                      ....| ...+++.+|+.|+++|+. ..+.|++++++.+.+.+.+.++++++.|.     ++.+|+.++++.+++++++.+
T Consensus       110 ~~~~g-~~~l~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~  182 (463)
T PLN02196        110 ERMLG-KQAIFFHQGDYHAKLRKL-VLRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALLS  182 (463)
T ss_pred             HHHcC-cccccccCcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHH
Confidence            22222 235556679999999999 56789999999999999999999888763     357999999999999999999


Q ss_pred             hccccccc-hhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 047291          201 VFGKKANE-ESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAK  279 (511)
Q Consensus       201 ~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  279 (511)
                      +||.+... .+.+...........      ..+|+.  +.  ....++..++.+.+.+++.+.++++++.     .....
T Consensus       183 ~fG~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~p--~~~~~~~~~a~~~~~~~~~~~i~~~~~~-----~~~~~  247 (463)
T PLN02196        183 IFGKDEVLYREDLKRCYYILEKGY------NSMPIN--LP--GTLFHKSMKARKELAQILAKILSKRRQN-----GSSHN  247 (463)
T ss_pred             HcCCCCchHHHHHHHHHHHHhcch------hccccc--CC--CccchHHHHHHHHHHHHHHHHHHHHhhc-----CCCcc
Confidence            99997532 222222222211111      112211  10  0123456677888889999888877653     22346


Q ss_pred             cHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcC---CCcCCcc
Q 047291          280 DFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGK---KLKVEAS  356 (511)
Q Consensus       280 ~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~~~~~  356 (511)
                      |+++.+++..      .+++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+.   ++.++.+
T Consensus       248 d~l~~ll~~~------~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~  321 (463)
T PLN02196        248 DLLGSFMGDK------EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWE  321 (463)
T ss_pred             cHHHHHHhcC------CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHH
Confidence            8888888531      358999999999999999999999999999999999999999999999998864   3457889


Q ss_pred             cccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCC
Q 047291          357 DINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFM  436 (511)
Q Consensus       357 ~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~  436 (511)
                      +++++|||+||++|+||++|+++... |.+.+|++++||.||||+.|+++.+.+|+|+++|+||++|+||||+++.    
T Consensus       322 ~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~----  396 (463)
T PLN02196        322 DTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP----  396 (463)
T ss_pred             HHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC----
Confidence            99999999999999999999999976 9999999999999999999999999999999999999999999999642    


Q ss_pred             CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          437 GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       437 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                       .+..++|||+|+|.|+|+++|+.|++++++.|+++|+|++.++..    ..  ....+..|++++.|++..+
T Consensus       397 -~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~----~~--~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        397 -KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN----GI--QYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             -CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC----ce--EEcccccCCCCceEEEecC
Confidence             356899999999999999999999999999999999999875431    12  2333456888988887653


No 25 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.7e-70  Score=483.51  Aligned_cols=442  Identities=22%  Similarity=0.368  Sum_probs=362.3

Q ss_pred             CCCCCCC-CCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhc
Q 047291           45 NLPPCPP-KLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFL  123 (511)
Q Consensus        45 ~~~pgp~-~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~  123 (511)
                      ..||.-+ ++|++|++..|+++|..+++++++|||+||++.++|+.+.++.+|+....++..+...++....+.......
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            4777765 589999999999999999999999999999999999999999999999999987644333332222222222


Q ss_pred             cCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHH-HHHhccCCCceeHHHHHHHHHHHhhhhhhc
Q 047291          124 YGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINK-LRRASLKGASVNLSEMLLTVTNDTVGRCVF  202 (511)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  202 (511)
                      + |.+.+....+....++.+. ....+....++++.+.+.+++++.++. +.+   +|....+.++.+.+++.+.-..+|
T Consensus       111 F-g~~v~~d~~~~~~~e~~~~-~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll~  185 (486)
T KOG0684|consen  111 F-GKGVVYDVPNHVMMEQKKF-FKSALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLLG  185 (486)
T ss_pred             c-CCCccccCCCchHHHHHHH-HHHHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhhh
Confidence            2 3456666667777788777 577888999999999999999999887 333   566667778888888877777788


Q ss_pred             cccccc-hhhHHHHHHHHHHhccccccccccc-cchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 047291          203 GKKANE-ESKFGTISRRLTTQLQAFSFGDVFP-ALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKD  280 (511)
Q Consensus       203 G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  280 (511)
                      |+.... +++....+.+....+..  +...|| ++++     ...+...++++.+.+.+...+.++++..    +...+|
T Consensus       186 ~e~r~~~d~~~a~l~~dLd~~F~~--~d~~FP~~LP~-----~~~r~~~ra~~~i~k~f~~~i~~rr~s~----s~~~~d  254 (486)
T KOG0684|consen  186 GEVRDQLDADVAKLYHDLDQGFQP--FDFLFPYNLPI-----PLLRRRDRARKKISKIFSKIILDRRASI----SKWDND  254 (486)
T ss_pred             hhhhhhhcchHHHHHHHHhccccc--hHhhcccCCCc-----chhhhHHHHHHHHHHHHHHHHHHHHhcc----ccccHH
Confidence            876654 45666667666665543  444466 3322     3345566889999999999999998764    456678


Q ss_pred             HHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCc-CCccccc
Q 047291          281 FVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLK-VEASDIN  359 (511)
Q Consensus       281 ~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~-~~~~~l~  359 (511)
                      +++.+++..+++   .+.+++|++..++.++|||+.||+++.+|++++|++|||+++++++|++++++++.. ++.+.++
T Consensus       255 mlq~l~~~y~dg---~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~  331 (486)
T KOG0684|consen  255 MLQSLMEKYKDG---RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLK  331 (486)
T ss_pred             HHHHHHHHhhcC---CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHh
Confidence            899998843333   368999999999999999999999999999999999999999999999999988765 8999999


Q ss_pred             CchhHHHHHhhhcCCCCCCccccccccCCcceecC----eeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCC
Q 047291          360 QMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGG----YEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNF  435 (511)
Q Consensus       360 ~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~  435 (511)
                      ++|.|++||+|||||+||.+... |.+.+|.++.+    |.||+|..|.+++..+|+||++|+||++|+|+||++++.+.
T Consensus       332 ~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~  410 (486)
T KOG0684|consen  332 DLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGES  410 (486)
T ss_pred             cchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCccc
Confidence            99999999999999999888877 99999999965    99999999999999999999999999999999999766543


Q ss_pred             C----CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          436 M----GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       436 ~----~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      .    .-.+.++|||+|.|.|||++||.+|++.++..+|++||+++.++.. +++++..   .++.|..+|.|+.+.|+
T Consensus       411 ~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~-P~~d~s~---~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  411 KKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPF-PEVDYSR---MVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             ccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCC-CCCCHHH---hhcCCCCCceEEEeecC
Confidence            1    1245679999999999999999999999999999999999998632 3344433   37899999999999986


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.1e-68  Score=529.13  Aligned_cols=437  Identities=22%  Similarity=0.350  Sum_probs=342.9

Q ss_pred             CCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCC--cEEEeecCcCEEEecCHHHHHHHHHhcCcccccCC
Q 047291           42 GNHNLPPCPPKLPIIGNLHQL-----GNLPHRSLRALSKKYGP--LMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRP  114 (511)
Q Consensus        42 ~~~~~~pgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~  114 (511)
                      ...+.||||+++|++|+++.+     ..+++.++.++++|||+  +|++++++.+.++++||+++++|+.++ ..|....
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence            455789999999999998766     34688899999999997  789999999999999999999999865 4444332


Q ss_pred             CccchhhhccCCceeEecCCchhHHHHHHHhhhccC-ChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHH
Q 047291          115 KTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELL-SPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVT  193 (511)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~  193 (511)
                      .......  .| .+.+...+|+.|+++|+.+ .+.| +++.++.+.+.+.+.++++++.+..    ++.+|+.++++.++
T Consensus       118 ~~~~~~~--~g-~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~  189 (490)
T PLN02302        118 PESTVEL--IG-RKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRKLT  189 (490)
T ss_pred             chhHHHH--hc-cccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHHHH
Confidence            2111221  22 2344556799999999995 5666 5788999999999999999988753    34699999999999


Q ss_pred             HHhhhhhhccccccch-hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 047291          194 NDTVGRCVFGKKANEE-SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERP  272 (511)
Q Consensus       194 ~~~~~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (511)
                      ++++++++||.+++.. +.+.............  ....+|..        ...+..++.+.+.+++.+.++++++....
T Consensus       190 ~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  259 (490)
T PLN02302        190 FKIIMYIFLSSESELVMEALEREYTTLNYGVRA--MAINLPGF--------AYHRALKARKKLVALFQSIVDERRNSRKQ  259 (490)
T ss_pred             HHHHHHHHcCCCChHHHHHHHHHHHHHHHHhhh--CCcCCCch--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999999999986532 2222222211111111  11111211        12234456677888888888888654322


Q ss_pred             CCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCC--
Q 047291          273 DDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKK--  350 (511)
Q Consensus       273 ~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~--  350 (511)
                      .......|+++.++++..+++  ..+++++++++++.+++||+|||+.+++|++++|++||++|+|+++|++++.+..  
T Consensus       260 ~~~~~~~d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~  337 (490)
T PLN02302        260 NISPRKKDMLDLLLDAEDENG--RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPP  337 (490)
T ss_pred             cCCCCcCCHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCC
Confidence            212345799999998754332  3589999999999999999999999999999999999999999999999998642  


Q ss_pred             --CcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCc
Q 047291          351 --LKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERF  428 (511)
Q Consensus       351 --~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~  428 (511)
                        ..++.+++++||||+|||+|++|++|+++.. +|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+||||
T Consensus       338 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~  416 (490)
T PLN02302        338 GQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRW  416 (490)
T ss_pred             CCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhc
Confidence              1278899999999999999999999999886 4999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeec
Q 047291          429 YNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVM  508 (511)
Q Consensus       429 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (511)
                      ++..    ..+..++|||+|+|.|+|++||..|+++++++|+++|++++.++..    ++.  ...+..|.+++.+++++
T Consensus       417 ~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~----~~~--~~~~~~p~~~~~~~~~~  486 (490)
T PLN02302        417 DNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC----KVM--YLPHPRPKDNCLARITK  486 (490)
T ss_pred             CCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC----cce--eCCCCCCCCCceEEEEe
Confidence            9653    2456899999999999999999999999999999999999875421    122  22236888999999987


Q ss_pred             cC
Q 047291          509 YS  510 (511)
Q Consensus       509 r~  510 (511)
                      |.
T Consensus       487 ~~  488 (490)
T PLN02302        487 VA  488 (490)
T ss_pred             cc
Confidence            75


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=5.1e-69  Score=523.22  Aligned_cols=434  Identities=20%  Similarity=0.290  Sum_probs=338.5

Q ss_pred             CCCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCC
Q 047291           41 GGNHNLPPCPPKLPIIGNLHQL-----GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPK  115 (511)
Q Consensus        41 ~~~~~~~pgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~  115 (511)
                      .++.+.||||.++|++|+++.+     ..+++.++.+++++||+||++++++.++++++||+++++++.++...+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4566789999999999998876     24688999999999999999999999999999999999999887766654421


Q ss_pred             ccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhh-hHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHH
Q 047291          116 TTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQY-FQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTN  194 (511)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~  194 (511)
                       ...... .| .+.+++.+|+.|+++|+.+ .+.|+...+.. +.+.+.+.++++++.+.    ++..+|+.+.+..+++
T Consensus        83 -~~~~~l-~g-~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         83 -KSLTEL-MG-KSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAF  154 (452)
T ss_pred             -hhHHHH-hC-cccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHH
Confidence             112222 22 2345666799999999994 66777666654 34555555555555442    3568999999999999


Q ss_pred             Hhhhhhhccccccch-hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047291          195 DTVGRCVFGKKANEE-SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPD  273 (511)
Q Consensus       195 ~~~~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  273 (511)
                      +++++++||.+.++. +.+...+..+......  +...+|..        ...+..++.+.+.+++.+.|+++++..+.+
T Consensus       155 ~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  224 (452)
T PLN03141        155 EVLVKALISLEPGEEMEFLKKEFQEFIKGLMS--LPIKLPGT--------RLYRSLQAKKRMVKLVKKIIEEKRRAMKNK  224 (452)
T ss_pred             HHHHHHHcCCCchHHHHHHHHHHHHHhhhHHh--CccCCCch--------HhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999876432 2222222222221111  11111111        112344678889999999998887653221


Q ss_pred             Cc---cccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhc--
Q 047291          274 DK---SVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVG--  348 (511)
Q Consensus       274 ~~---~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~--  348 (511)
                      ..   ....|+++.++++..     ..+++++++.+++.+++||+|||+.+++|++++|++||++|+++++|++++.+  
T Consensus       225 ~~~~~~~~~d~l~~ll~~~~-----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~  299 (452)
T PLN03141        225 EEDETGIPKDVVDVLLRDGS-----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLK  299 (452)
T ss_pred             CccccCChhhHHHHHHhcCC-----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhcc
Confidence            11   124689999887531     35899999999999999999999999999999999999999999999998863  


Q ss_pred             --CCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCC
Q 047291          349 --KKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPE  426 (511)
Q Consensus       349 --~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  426 (511)
                        .+..++.+++.+||||+|||+|++|++|+++.. +|.+.+|++++||.||||+.|+++.+.+|+|+++|+||++|+||
T Consensus       300 ~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~Pe  378 (452)
T PLN03141        300 ADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPW  378 (452)
T ss_pred             CCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcc
Confidence              234578889999999999999999999999755 69999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEe
Q 047291          427 RFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVP  506 (511)
Q Consensus       427 R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (511)
                      ||++++.    .+..|+|||+|+|.|+|++||.+|+++++|+|+++|++++.++..   .     ...++.|+.++.+++
T Consensus       379 Rfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~---~-----~~~~~~~~~~~~~~~  446 (452)
T PLN03141        379 RWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI---V-----NFPTVRMKRKLPIWV  446 (452)
T ss_pred             cccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe---e-----ecccccCCCCceEEE
Confidence            9997532    356899999999999999999999999999999999999765421   1     124678999999999


Q ss_pred             eccC
Q 047291          507 VMYS  510 (511)
Q Consensus       507 ~~r~  510 (511)
                      .+|.
T Consensus       447 ~~~~  450 (452)
T PLN03141        447 TRID  450 (452)
T ss_pred             EeCC
Confidence            9985


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3.9e-68  Score=515.40  Aligned_cols=436  Identities=19%  Similarity=0.285  Sum_probs=335.8

Q ss_pred             hCCCCCCCCCCCCCCcccccccCC-----CCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCC
Q 047291           40 KGGNHNLPPCPPKLPIIGNLHQLG-----NLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRP  114 (511)
Q Consensus        40 ~~~~~~~~pgp~~~p~iG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~  114 (511)
                      +..+...||||.++|++|++..+.     .++..++.+++++||++|+++++++++++|+||+++++++.++...|..+.
T Consensus        25 ~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~  104 (472)
T PLN02987         25 RYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSY  104 (472)
T ss_pred             ccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecC
Confidence            334556789999999999987752     457888999999999999999999999999999999999988777665443


Q ss_pred             CccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHH
Q 047291          115 KTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTN  194 (511)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~  194 (511)
                      .......+  |+ +++++.+|+.|+++|+++ .++++.+.++.+.   .+.+.++++...+..  .+++++.+.++++++
T Consensus       105 ~~~~~~~l--g~-~~l~~~~g~~wr~~R~~~-~~f~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~v~~~~~~~~~t~  175 (472)
T PLN02987        105 PGSISNLL--GK-HSLLLMKGNLHKKMHSLT-MSFANSSIIKDHL---LLDIDRLIRFNLDSW--SSRVLLMEEAKKITF  175 (472)
T ss_pred             cHHHHHHh--Cc-ccccccCcHHHHHHHHHH-HHhcChHHHHHHH---HHHHHHHHHHHHHhh--ccceehHHHHHHHHH
Confidence            22222222  22 344455799999999994 5555545544432   122333333222211  146999999999999


Q ss_pred             Hhhhhhhccccccch-hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047291          195 DTVGRCVFGKKANEE-SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPD  273 (511)
Q Consensus       195 ~~~~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  273 (511)
                      +++++++||.+.... +.+...+.......    +...+|++      ....++..++.+.+.+++.+.++++++..+.+
T Consensus       176 ~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~----~~~~~p~l------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  245 (472)
T PLN02987        176 ELTVKQLMSFDPGEWTESLRKEYVLVIEGF----FSVPLPLF------STTYRRAIQARTKVAEALTLVVMKRRKEEEEG  245 (472)
T ss_pred             HHHHHHHcCCCChHHHHHHHHHHHHHHhhh----hcCCCcCC------CchHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999876432 22222222221111    11223332      12345567788899999999999887653221


Q ss_pred             CccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhc---CC
Q 047291          274 DKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVG---KK  350 (511)
Q Consensus       274 ~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~---~~  350 (511)
                       ....+|+++.+++..      .++++++++++++.+++||+|||+.+++|++++|++||++|+++++|++++.+   ++
T Consensus       246 -~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~  318 (472)
T PLN02987        246 -AEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDS  318 (472)
T ss_pred             -CcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCC
Confidence             123579999999753      15899999999999999999999999999999999999999999999999875   23


Q ss_pred             CcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCC
Q 047291          351 LKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYN  430 (511)
Q Consensus       351 ~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~  430 (511)
                      ..++.+++++|||++||++|+||++|+++.. +|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++
T Consensus       319 ~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~  397 (472)
T PLN02987        319 YSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQS  397 (472)
T ss_pred             CCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCC
Confidence            4578889999999999999999999999865 599999999999999999999999999999999999999999999997


Q ss_pred             CCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          431 NPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       431 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ++.. ...+..++|||+|+|.|+|++||..|++++++.|+++|++++.++..   +    .+..+++|.+++.+++++|.
T Consensus       398 ~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~----~~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        398 NSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK---L----VFFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc---e----eecccccCCCCceEEEEecc
Confidence            5422 12346799999999999999999999999999999999999875432   1    12347889999999999985


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=4.4e-68  Score=520.37  Aligned_cols=447  Identities=24%  Similarity=0.384  Sum_probs=349.7

Q ss_pred             CCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhh
Q 047291           47 PPCPPKLPIIGNLHQL-----GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADI  121 (511)
Q Consensus        47 ~pgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~  121 (511)
                      -.|-.|||.+|..+.+     .+.++..+.+++++||++|++++|+.++++++||+++++|+.+....|.++........
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~   93 (489)
T PLN02936         14 WGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEF   93 (489)
T ss_pred             CCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHH
Confidence            3466789999987766     56788999999999999999999999999999999999999876666665432222111


Q ss_pred             hccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHH-HHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhh
Q 047291          122 FLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQF-VRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRC  200 (511)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~  200 (511)
                      . . + +.+++.+|+.|+++|+. +.+.|+..+++.+.+ .+.+.++.+++.+.+...++.++|+.++++.+++++++.+
T Consensus        94 ~-~-~-~~i~~~~g~~wk~~Rk~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~  169 (489)
T PLN02936         94 L-F-G-SGFAIAEGELWTARRRA-VVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLS  169 (489)
T ss_pred             H-h-c-CccccCCchHHHHHHHh-hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHH
Confidence            1 1 2 34555679999999999 688899888887654 7888999999999876555678999999999999999999


Q ss_pred             hccccccch---hhHHHHHHHHHHhccccccccccccchh--hhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCC-
Q 047291          201 VFGKKANEE---SKFGTISRRLTTQLQAFSFGDVFPALGW--MDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDD-  274 (511)
Q Consensus       201 ~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~l~~--l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-  274 (511)
                      +||.+++..   .++...+......... .....+|++.+  +..+.+..+...++.+.+.+++.+.++++++..++.. 
T Consensus       170 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~  248 (489)
T PLN02936        170 VFNYNFDSLTTDSPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGE  248 (489)
T ss_pred             HcCCCccccccCcHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            999998632   2333333332221111 11223333211  1111112334567778888888888877664321100 


Q ss_pred             --------ccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 047291          275 --------KSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRV  346 (511)
Q Consensus       275 --------~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  346 (511)
                              .....|+++.|++..      .+++++++.++++.+++||+|||+.+++|++|+|++||++|+++|+||+++
T Consensus       249 ~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~  322 (489)
T PLN02936        249 VIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRV  322 (489)
T ss_pred             ccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence                    123467888888643      248899999999999999999999999999999999999999999999999


Q ss_pred             hcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCC
Q 047291          347 VGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPE  426 (511)
Q Consensus       347 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  426 (511)
                      ++.+ .++.+++++||||+||++||||++|+++...+|.+.+|+.++||.||||+.|+++.+.+|+||++|+||++|+||
T Consensus       323 ~~~~-~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~Pe  401 (489)
T PLN02936        323 LQGR-PPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPE  401 (489)
T ss_pred             hcCC-CCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcc
Confidence            8753 478899999999999999999999999998877778888889999999999999999999999999999999999


Q ss_pred             CcCCCCCC--CCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeE
Q 047291          427 RFYNNPVN--FMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYL  504 (511)
Q Consensus       427 R~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (511)
                      ||+.++..  ....+..++|||.|+|.|||++||++|+++++++|+++|+++++++..   .  ....+++..|++++.|
T Consensus       402 Rwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~---~--~~~~~~~~~~~~~~~v  476 (489)
T PLN02936        402 RFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQD---I--VMTTGATIHTTNGLYM  476 (489)
T ss_pred             ccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCc---c--ceecceEEeeCCCeEE
Confidence            99965321  122345899999999999999999999999999999999999876432   2  2234566778899999


Q ss_pred             EeeccC
Q 047291          505 VPVMYS  510 (511)
Q Consensus       505 ~~~~r~  510 (511)
                      ++++|.
T Consensus       477 ~~~~R~  482 (489)
T PLN02936        477 TVSRRR  482 (489)
T ss_pred             EEEeee
Confidence            999885


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3.6e-66  Score=505.61  Aligned_cols=436  Identities=20%  Similarity=0.265  Sum_probs=336.0

Q ss_pred             CCcccccccCCCCCcHHHHHHHHhhC-CcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc-hhhhccCCceeE
Q 047291           53 LPIIGNLHQLGNLPHRSLRALSKKYG-PLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA-ADIFLYGCIDIA  130 (511)
Q Consensus        53 ~p~iG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  130 (511)
                      .++.|+......+....+..+.++++ .+++++..+.  ++++||+++++|+.++...|++...+.. .... . + +++
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~-~-g-~gi  123 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL-L-G-RGI  123 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh-c-C-Cce
Confidence            55778877655556777777888887 5778776554  8999999999999877656654433221 1111 1 2 345


Q ss_pred             ecCCchhHHHHHHHhhhccCChhHHhhhH--HHHHHHHHHHHHHHHHhccC--CCceeHHHHHHHHHHHhhhhhhccccc
Q 047291          131 FSPYGEYWREIRRIGVHELLSPQRVQYFQ--FVRDEETADMINKLRRASLK--GASVNLSEMLLTVTNDTVGRCVFGKKA  206 (511)
Q Consensus       131 ~~~~~~~~~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~~~~--~~~vdl~~~~~~~~~~~~~~~~fG~~~  206 (511)
                      ++.+|+.|+++||. +.+.|+.+.++.+.  +.+.+..+.+++.+.+.+++  +..+|+.++++.+++|+++.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~-l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKM-ASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHH-hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            66789999999999 58899998888764  67778788888888765322  367999999999999999999999987


Q ss_pred             cch------hhHHHHHHHHHHhccccccccccccchhhhh-c-cCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 047291          207 NEE------SKFGTISRRLTTQLQAFSFGDVFPALGWMDH-L-TGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVA  278 (511)
Q Consensus       207 ~~~------~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~-~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  278 (511)
                      +..      .++...+......... ......|++.++.. + .+..++..++.+.+.+++.+.|+++++..    ....
T Consensus       203 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~----~~~~  277 (502)
T PLN02426        203 GCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG----FSAS  277 (502)
T ss_pred             cccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc----cCCc
Confidence            521      2344443332211110 11112232221111 1 12235567788899999999999887542    2235


Q ss_pred             ccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCC-CcCCccc
Q 047291          279 KDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKK-LKVEASD  357 (511)
Q Consensus       279 ~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~  357 (511)
                      .|+++.++++.        .+++++.+++.++++||+|||+.+++|++|+|++||++|+||++||+++.+++ ..++.++
T Consensus       278 ~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~  349 (502)
T PLN02426        278 KDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEE  349 (502)
T ss_pred             chHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHH
Confidence            78999999752        36789999999999999999999999999999999999999999999998754 3578999


Q ss_pred             ccCchhHHHHHhhhcCCCCCCccccccccCCccee-cCeeeCCCcEEEeehHHhhcCCCCC-CCCCCCCCCCcCCCCCCC
Q 047291          358 INQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM-GGYEIPAKTRVFANAWAIQRDPKLW-DNPEEFIPERFYNNPVNF  435 (511)
Q Consensus       358 l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~~  435 (511)
                      +++||||+|||+|+||++|+++... |.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++...
T Consensus       350 l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~  428 (502)
T PLN02426        350 MKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFV  428 (502)
T ss_pred             HhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcC
Confidence            9999999999999999999999876 999888777 9999999999999999999999999 999999999999743211


Q ss_pred             CCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccCC
Q 047291          436 MGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYSA  511 (511)
Q Consensus       436 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  511 (511)
                      ...+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++.. ..  .....++++.|++++.+++++|..
T Consensus       429 ~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~--~~~~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        429 PENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN-RA--PRFAPGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             CCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC-CC--CcccceeEEecCCCEEEEEEEccC
Confidence            23456799999999999999999999999999999999999864321 11  222346788999999999999863


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=6.3e-60  Score=454.02  Aligned_cols=404  Identities=19%  Similarity=0.244  Sum_probs=294.6

Q ss_pred             CCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCC-cEEEeecCcCE-------EEecCHHHHHHHHHh----
Q 047291           43 NHNLPPCPPKLPIIGNLHQL-----GNLPHRSLRALSKKYGP-LMLIHWGQTPT-------VIVSSADMAKEMMKT----  105 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~~p~~i~~i~~~----  105 (511)
                      +.+.|||+.++|++|+++.+     ..++..++.+.++|||+ ||++.++|.+.       |++++|++++.++..    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            45679999999999999864     45668999999999998 99999998655       999999999999974    


Q ss_pred             cCcccccCCCccchhhhccCCc--eeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCce
Q 047291          106 HDIIFSNRPKTTAADIFLYGCI--DIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASV  183 (511)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~v  183 (511)
                      ++..+..... ....  ..|+.  ..+++.+|+.|+++|++ +.+.|+ ..++.+.+.+.+.++++++.|.....++.++
T Consensus        95 ~~~~~~~~~~-~~~~--l~G~~~~~s~~~~~g~~H~r~Rrl-l~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         95 KRDVFTGTYM-PSTA--FTGGYRVLSYLDPSEPKHAKLKSF-LFELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             ccccceeeec-cCcc--ccCCceeeeecCCCCchHHHHHHH-HHHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence            3332332111 1122  22222  16667789999999999 578888 4778899999999999999996543345679


Q ss_pred             eHHHHHHHHHHHhhhhhhccccccch---hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHH
Q 047291          184 NLSEMLLTVTNDTVGRCVFGKKANEE---SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFD  260 (511)
Q Consensus       184 dl~~~~~~~~~~~~~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~  260 (511)
                      |+.+.++.++++++++++||.+.+..   +.+......+....       .+|....                .+...++
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~~~l~~~~~~~~~~~~~~~-------~~p~~~~----------------~l~~~~~  226 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSETALGSDGPALIQKWLALQ-------LAPLAST----------------GLPHVLE  226 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcchhhhccchhHHHHHHHHHH-------hhHHHHc----------------CchHHHH
Confidence            99999999999999999999976541   11111221111100       0011000                0000111


Q ss_pred             HHHHHHHhccCCCCccccc-------cHHHHHHHhccccccccCCChHHHHHHHHH-HHhhchhhHHHHHHHHHHHHhcC
Q 047291          261 DVIAEHRNLERPDDKSVAK-------DFVDILLQVQKDATTKHELSQENLKAILLD-MFVGGTDSTSTTMEWAMAELVKH  332 (511)
Q Consensus       261 ~~i~~~~~~~~~~~~~~~~-------~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~  332 (511)
                      +.+.++.............       +.+..+++...+    .+++++++.++++. +.+++++|++.+++|++|+|++|
T Consensus       227 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~  302 (480)
T PLN02648        227 ELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRA  302 (480)
T ss_pred             HHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence            1111000000000000001       112234433222    25999999999875 44667788888999999999999


Q ss_pred             ch-HHHHHHHHHHHHhcC-CCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceec----CeeeCCCcEEEee
Q 047291          333 PS-TMKKAQEEVRRVVGK-KLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMG----GYEIPAKTRVFAN  406 (511)
Q Consensus       333 p~-~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~----g~~ip~G~~v~~~  406 (511)
                      |+ +|++|++||+++.+. ++.++.+++++||||++|++|+||++|+++... |.+.+|++++    ||.||||+.|+++
T Consensus       303 p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~~~  381 (480)
T PLN02648        303 GEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLFGY  381 (480)
T ss_pred             CHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEEEC
Confidence            95 999999999999863 456899999999999999999999999999887 8889999996    7999999999999


Q ss_pred             hHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeec---------CCCCCCCCCchHHHHHHHHHHHHhHhhcc-cc
Q 047291          407 AWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPF---------GAGRRGCPGTLFGVTSAEGVVANLLYWFD-WK  476 (511)
Q Consensus       407 ~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~e~~~~la~ll~~f~-~~  476 (511)
                      .+.+|+||++|+||++|||+||++++.+   ....+++|         |+|+|.|+|++||+.|++++++.|+++|+ ++
T Consensus       382 ~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~  458 (480)
T PLN02648        382 QPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFE  458 (480)
T ss_pred             hHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEe
Confidence            9999999999999999999999865322   11233444         67789999999999999999999999998 99


Q ss_pred             cCCCCC
Q 047291          477 LPGDTV  482 (511)
Q Consensus       477 ~~~~~~  482 (511)
                      +.++..
T Consensus       459 l~~~~~  464 (480)
T PLN02648        459 IEVDTS  464 (480)
T ss_pred             ecCCcc
Confidence            876643


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.4e-54  Score=412.55  Aligned_cols=382  Identities=25%  Similarity=0.395  Sum_probs=306.1

Q ss_pred             CcHHHHHHHHhhCCcEEEeecCcC--EEEecCHHHHHHHHHhcCcccccCCCccch---hhhccCCceeEecCCchhHHH
Q 047291           66 PHRSLRALSKKYGPLMLIHWGQTP--TVIVSSADMAKEMMKTHDIIFSNRPKTTAA---DIFLYGCIDIAFSPYGEYWRE  140 (511)
Q Consensus        66 ~~~~~~~~~~kyG~v~~~~~~~~~--~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  140 (511)
                      +......+.+.||.++.+...++.  +++++++++++++++++. .+++.......   ..... +...+++.+|+.|++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVL-GDGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhc-cccceeecCCHHHHH
Confidence            455666778889988888776665  899999999999998764 12222111111   11121 233367778999999


Q ss_pred             HHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHH
Q 047291          141 IRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGKKANEESKFGTISRRLT  220 (511)
Q Consensus       141 ~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~  220 (511)
                      +|+. +.+.|+++.++.+.+.+.+.++++++.+ .   .+...++.+.+..++.++++ .+||.+.++...+........
T Consensus       102 ~Rkl-~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~---~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~  175 (411)
T COG2124         102 LRKL-LAPAFTPRALRGYRPLIREIADRLLDDL-W---QGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALL  175 (411)
T ss_pred             HHHH-hccccCHHHHHHHHHHHHHHHHHHHHhc-c---cCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHH
Confidence            9999 6899999999999999999999999998 3   22678899999999999999 999998876655544444333


Q ss_pred             HhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCCh
Q 047291          221 TQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQ  300 (511)
Q Consensus       221 ~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~  300 (511)
                      ....        |....    .....+..++...+.+++..+|++++       ....+|+++.++.+..+++  ..+|+
T Consensus       176 ~~~~--------~~~~~----~~~~~~~~~a~~~~~~~~~~li~~rR-------~~~~~dlls~l~~a~~~~~--~~lsd  234 (411)
T COG2124         176 LRLD--------PDLGP----EEPWRRARAARRELDAYLRALIAERR-------AAPRDDLLSLLLSAEDDGG--GRLSD  234 (411)
T ss_pred             hccC--------cccCC----cccHHHHHHHHHHHHHHHHHHHHHhc-------cCCcccHHHHHHHHhhCCC--CcCCH
Confidence            3210        11110    12234578889999999999999998       3566899999998876654  25999


Q ss_pred             HHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCcc
Q 047291          301 ENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPL  380 (511)
Q Consensus       301 ~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~  380 (511)
                      +|+.++++++++||+|||+++++|++|.|++||++++++++|.+.                ||++++++|+||++|+++.
T Consensus       235 ~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~  298 (411)
T COG2124         235 DEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL  298 (411)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc
Confidence            999999999999999999999999999999999999999998643                8999999999999999999


Q ss_pred             ccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHH
Q 047291          381 LVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVT  460 (511)
Q Consensus       381 ~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~  460 (511)
                       .+|.+.+|++++|+.||||+.|+++.+.+||||++|+||++|||+||.          ..++|||+|+|.|+|.+||++
T Consensus       299 -~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~  367 (411)
T COG2124         299 -ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARL  367 (411)
T ss_pred             -cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHH
Confidence             679999999999999999999999999999999999999999999988          468999999999999999999


Q ss_pred             HHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          461 SAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       461 e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      |++++++.++++|++....+ . ...    ....+..+..+..+.++.|
T Consensus       368 E~~~~l~~ll~r~~~~~~~~-~-~~~----~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         368 ELKVALAELLRRFPLLLLAE-P-PPL----VRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHhCchhhcCC-C-CCc----cccccccCCCcceeeeecC
Confidence            99999999999999876554 1 111    1233345555666666554


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=59.25  E-value=3.1  Score=35.14  Aligned_cols=44  Identities=14%  Similarity=0.330  Sum_probs=32.6

Q ss_pred             CchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEe
Q 047291          360 QMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFA  405 (511)
Q Consensus       360 ~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~  405 (511)
                      .-....|||.|+.-+....-.-+  ...+|+.++|..|||||.+.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vrl--RLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVRL--RLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEEE--EEcCceEECCEEeCCCCEEEE
Confidence            34567789999988766554432  345789999999999997755


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=56.59  E-value=8.5  Score=25.02  Aligned_cols=8  Identities=38%  Similarity=0.650  Sum_probs=6.5

Q ss_pred             CCCCcCCC
Q 047291          424 IPERFYNN  431 (511)
Q Consensus       424 ~p~R~~~~  431 (511)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            88999864


No 35 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=55.89  E-value=45  Score=20.69  Aligned_cols=43  Identities=14%  Similarity=0.210  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHH
Q 047291          301 ENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEV  343 (511)
Q Consensus       301 ~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  343 (511)
                      -++...+..++-.|.|..+-.++-.+.+.--||+....+..|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            4567777778888888888888888888889999888887775


No 36 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=52.16  E-value=1.1e+02  Score=23.55  Aligned_cols=95  Identities=17%  Similarity=0.245  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcc------ccccccCCChHHHHHHHHHHHhhchhhHHHHHHHH--H
Q 047291          255 LDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQK------DATTKHELSQENLKAILLDMFVGGTDSTSTTMEWA--M  326 (511)
Q Consensus       255 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~------~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~--l  326 (511)
                      ..+-+..+++++++....+.+..-.+..+.|++.-.      .+..+++++.++.-..++.-......+++..|...  .
T Consensus        12 v~~~I~~iVe~r~qeGA~~~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~~~~ILg~~~ls   91 (127)
T PF05261_consen   12 VLEEINDIVEERRQEGATEKDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFTVSKILGMSSLS   91 (127)
T ss_dssp             HHHHHHHHHHHHHCCT-TTTT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            344566788888887654434444566677775421      11124678888888888887777777777766654  3


Q ss_pred             HHHhcCch---------HHHHHHHHHHHHhcC
Q 047291          327 AELVKHPS---------TMKKAQEEVRRVVGK  349 (511)
Q Consensus       327 ~~L~~~p~---------~~~~lr~Ei~~~~~~  349 (511)
                      -++..+|.         +.++++++++..+++
T Consensus        92 ~~v~~~~~~ey~~m~~~I~~~v~e~m~~FFpe  123 (127)
T PF05261_consen   92 PEVKGNPKFEYENMVEKIREKVSEEMERFFPE  123 (127)
T ss_dssp             HHHCCHCGG-HHHHHHHHHHHHHHHHHHHS-C
T ss_pred             HhhccCCcccHHHHHHHHHHHHHHHHHhcCCC
Confidence            56666654         334445555555443


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=50.83  E-value=19  Score=24.69  Aligned_cols=39  Identities=15%  Similarity=0.181  Sum_probs=31.8

Q ss_pred             HhhhcCCCCCCccccccccCCc--ceecCeeeCCCcEEEee
Q 047291          368 IKESLRLHAPAPLLVHRETSSS--VKMGGYEIPAKTRVFAN  406 (511)
Q Consensus       368 i~E~lRl~~~~~~~~~R~~~~d--~~i~g~~ip~G~~v~~~  406 (511)
                      ++|.+.+.+.+....-|.+.++  +.++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            6788999998887777777765  45599999999988765


No 38 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=45.04  E-value=18  Score=23.26  Aligned_cols=18  Identities=28%  Similarity=0.482  Sum_probs=15.9

Q ss_pred             HHHHHhcCchHHHHHHHH
Q 047291          325 AMAELVKHPSTMKKAQEE  342 (511)
Q Consensus       325 ~l~~L~~~p~~~~~lr~E  342 (511)
                      ++.+|.+||++.++|.+.
T Consensus         5 iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHChHHHHHHHcC
Confidence            578999999999999875


No 39 
>PF10777 YlaC:  Inner membrane protein YlaC;  InterPro: IPR019713  The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis []. 
Probab=39.10  E-value=25  Score=27.72  Aligned_cols=38  Identities=13%  Similarity=0.442  Sum_probs=31.5

Q ss_pred             HHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchh
Q 047291          326 MAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEY  363 (511)
Q Consensus       326 l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~  363 (511)
                      +-.|+++|++-+.+.++|++++...+.+++.|+-.+.|
T Consensus       115 i~~iL~~p~V~~~~K~~i~~i~~~Kgei~FYDVy~la~  152 (155)
T PF10777_consen  115 IDKILQSPQVPDEIKQGIQRIISTKGEISFYDVYSLAY  152 (155)
T ss_pred             HHHHHcCCCCCHHHHHHHHHHHHhCCceeEEEeEEeec
Confidence            34578999999999999999999888888887665544


No 40 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=36.85  E-value=75  Score=22.62  Aligned_cols=19  Identities=21%  Similarity=0.480  Sum_probs=16.3

Q ss_pred             CchHHHHHHHHHHHHhcCC
Q 047291          332 HPSTMKKAQEEVRRVVGKK  350 (511)
Q Consensus       332 ~p~~~~~lr~Ei~~~~~~~  350 (511)
                      .|++.+.+|+||.+++.+.
T Consensus        35 ~pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851          35 QPDYLEQLRKEILEVISKY   53 (88)
T ss_pred             CcchHHHHHHHHHHHHHHH
Confidence            3899999999999998654


No 41 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=34.55  E-value=39  Score=18.68  Aligned_cols=16  Identities=38%  Similarity=0.710  Sum_probs=12.9

Q ss_pred             CCcceeecCCCCCCCC
Q 047291          438 EDFHYIPFGAGRRGCP  453 (511)
Q Consensus       438 ~~~~~~~Fg~G~r~C~  453 (511)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3457999999999994


No 42 
>PRK13713 conjugal transfer protein TraM; Provisional
Probab=34.54  E-value=2.1e+02  Score=21.78  Aligned_cols=90  Identities=12%  Similarity=0.250  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHhccCCCCccccccHHHHHHHhc------cccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHH--
Q 047291          255 LDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQ------KDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAM--  326 (511)
Q Consensus       255 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~------~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l--  326 (511)
                      ..+-+..+++++++....+.+..-.+..+.|++.-      .....+++++..+.-..++....-...+++..+....  
T Consensus         5 v~e~I~~iVe~RrqEGA~~~Dvs~SSv~sMLLELGLRVYeaQ~erkes~Fnq~eFnK~lLE~v~kt~~~~~~IL~~~~ls   84 (118)
T PRK13713          5 VYEKINAIVEERRQEGAREKDVSFSSVASMLLELGLRVYEAQMERKESGFNQTEFNKLLLECVVKTQSTVAKILGIESLS   84 (118)
T ss_pred             HHHHHHHHHHHHHHcCCCccCccHHHHHHHHHHHhHHHHHHHHHhhcCcccHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence            34456678888888765443333445556666431      1111235688888777777777776666665554333  


Q ss_pred             HHHhcCch-HHHHHHHHHH
Q 047291          327 AELVKHPS-TMKKAQEEVR  344 (511)
Q Consensus       327 ~~L~~~p~-~~~~lr~Ei~  344 (511)
                      -++..+|. -.+.+.++|+
T Consensus        85 p~v~~~~~~ey~~mv~~I~  103 (118)
T PRK13713         85 PHVSGNPKFEYANMVEDIR  103 (118)
T ss_pred             HhhcCCCcccHHHHHHHHH
Confidence            46677765 2333444443


No 43 
>PF13993 YccJ:  YccJ-like protein
Probab=33.41  E-value=54  Score=21.22  Aligned_cols=31  Identities=26%  Similarity=0.250  Sum_probs=24.8

Q ss_pred             hhchhhHHHHHHHHHHHHhcCchHH-HHHHHH
Q 047291          312 VGGTDSTSTTMEWAMAELVKHPSTM-KKAQEE  342 (511)
Q Consensus       312 ~ag~~tt~~~l~~~l~~L~~~p~~~-~~lr~E  342 (511)
                      +|..-.|+.-++-++++|+.+.+.+ +++.+|
T Consensus         8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWee   39 (69)
T PF13993_consen    8 WANVRETSIEIAEAIFELANNDEVLAEKIWEE   39 (69)
T ss_pred             HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHc
Confidence            5666778888999999999998854 567776


No 44 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=32.32  E-value=45  Score=21.20  Aligned_cols=18  Identities=11%  Similarity=0.272  Sum_probs=16.0

Q ss_pred             hCCcEEEeecCcCEEEec
Q 047291           77 YGPLMLIHWGQTPTVIVS   94 (511)
Q Consensus        77 yG~v~~~~~~~~~~vvv~   94 (511)
                      -|++++++-||+.++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            489999999999999974


No 45 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=30.17  E-value=17  Score=34.57  Aligned_cols=45  Identities=11%  Similarity=0.251  Sum_probs=33.1

Q ss_pred             CchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEee
Q 047291          360 QMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFAN  406 (511)
Q Consensus       360 ~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~  406 (511)
                      .-..+.|||.|+.-+.-..-.-  =...+|+.++|..|||||.+.-.
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEEE
Confidence            3456788999998887554333  23457899999999999977553


No 46 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=28.49  E-value=68  Score=18.84  Aligned_cols=28  Identities=18%  Similarity=0.401  Sum_probs=17.6

Q ss_pred             chHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcC
Q 047291          333 PSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLR  373 (511)
Q Consensus       333 p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  373 (511)
                      .++.+.+|.|++.+             +-..++|+..|-.|
T Consensus        10 qEIL~EvrkEl~K~-------------K~EIIeA~~~eL~r   37 (40)
T PF08776_consen   10 QEILEEVRKELQKV-------------KEEIIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHH-------------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-------------HHHHHHHHHHHHhc
Confidence            35667777777765             23456777666554


No 47 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=27.28  E-value=60  Score=25.32  Aligned_cols=23  Identities=22%  Similarity=0.411  Sum_probs=17.0

Q ss_pred             CCCCCchHHHHHHHHHHHHhHhh
Q 047291          450 RGCPGTLFGVTSAEGVVANLLYW  472 (511)
Q Consensus       450 r~C~G~~~A~~e~~~~la~ll~~  472 (511)
                      -.|.|+.||...+-.+++.++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999873


No 48 
>PHA03162 hypothetical protein; Provisional
Probab=26.63  E-value=62  Score=24.92  Aligned_cols=24  Identities=21%  Similarity=0.429  Sum_probs=20.3

Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHh
Q 047291          446 GAGRRGCPGTLFGVTSAEGVVANL  469 (511)
Q Consensus       446 g~G~r~C~G~~~A~~e~~~~la~l  469 (511)
                      ++|.+.|||+...+-|+..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            579999999999999988777655


No 49 
>PRK05933 type III secretion system protein; Validated
Probab=26.00  E-value=71  Score=29.15  Aligned_cols=43  Identities=12%  Similarity=0.108  Sum_probs=34.3

Q ss_pred             HHHHHhhhcCCCCCCcccccccc-CC--cceecCeeeCCCcEEEee
Q 047291          364 LKCVIKESLRLHAPAPLLVHRET-SS--SVKMGGYEIPAKTRVFAN  406 (511)
Q Consensus       364 l~a~i~E~lRl~~~~~~~~~R~~-~~--d~~i~g~~ip~G~~v~~~  406 (511)
                      ...-|+|.++|.+.+..-..|.+ .+  |+.++|..|.+|..|.++
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            45678999999998887775554 33  677799999999999875


No 50 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=25.02  E-value=1.1e+02  Score=24.45  Aligned_cols=21  Identities=19%  Similarity=0.510  Sum_probs=11.8

Q ss_pred             HHHHHHHhhCCCCCCCCCCCC
Q 047291           32 LLILFKFIKGGNHNLPPCPPK   52 (511)
Q Consensus        32 ~~~~~~~~~~~~~~~~pgp~~   52 (511)
                      ..+++++.++...+.||-|.+
T Consensus       164 A~L~~~F~RR~~rrsppepsg  184 (215)
T PF05084_consen  164 AMLTWFFLRRTGRRSPPEPSG  184 (215)
T ss_pred             HHHHHHHHHhhccCCCCCCCC
Confidence            344555555555566776653


No 51 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=24.88  E-value=33  Score=21.68  Aligned_cols=11  Identities=45%  Similarity=0.984  Sum_probs=9.0

Q ss_pred             eecCCCCCCCC
Q 047291          443 IPFGAGRRGCP  453 (511)
Q Consensus       443 ~~Fg~G~r~C~  453 (511)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999999983


No 52 
>PRK10174 hypothetical protein; Provisional
Probab=24.00  E-value=1.1e+02  Score=20.27  Aligned_cols=31  Identities=23%  Similarity=0.172  Sum_probs=24.9

Q ss_pred             hhchhhHHHHHHHHHHHHhcCchHH-HHHHHH
Q 047291          312 VGGTDSTSTTMEWAMAELVKHPSTM-KKAQEE  342 (511)
Q Consensus       312 ~ag~~tt~~~l~~~l~~L~~~p~~~-~~lr~E  342 (511)
                      +|..-.|+.-++-++++++.+.+++ +++.+|
T Consensus        14 WA~vR~TS~EIAeAIFE~A~~dE~lAe~IWee   45 (75)
T PRK10174         14 WASLRNTSPEIAEAIFEVAGYDEKLAEKIWEE   45 (75)
T ss_pred             HHHHhhCCHHHHHHHHHHhcccHHHHHHHHHh
Confidence            5667788888999999999998854 567765


No 53 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=23.32  E-value=2.8e+02  Score=19.72  Aligned_cols=50  Identities=12%  Similarity=0.117  Sum_probs=41.4

Q ss_pred             CChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Q 047291          298 LSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVV  347 (511)
Q Consensus       298 l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  347 (511)
                      .+.+.........++-=+..++..+.-++.+-++||+..+++.+.+..-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34556666677788888999999999999999999999999999887654


No 54 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=22.61  E-value=1.2e+02  Score=17.76  Aligned_cols=12  Identities=17%  Similarity=0.462  Sum_probs=9.4

Q ss_pred             hcCchHHHHHHH
Q 047291          330 VKHPSTMKKAQE  341 (511)
Q Consensus       330 ~~~p~~~~~lr~  341 (511)
                      .+||++++.+++
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            389998888765


No 55 
>PF10915 DUF2709:  Protein of unknown function (DUF2709);  InterPro: IPR024484 Members of this family appear restricted to Chlamydiales. Their function is unknown.
Probab=22.57  E-value=1.8e+02  Score=24.21  Aligned_cols=51  Identities=12%  Similarity=0.166  Sum_probs=38.1

Q ss_pred             CCCcccccccC--CCCCcHHHHHHHHhhC-Cc-----EEEeecCcCEEEecCHHHHHHHHHhc
Q 047291           52 KLPIIGNLHQL--GNLPHRSLRALSKKYG-PL-----MLIHWGQTPTVIVSSADMAKEMMKTH  106 (511)
Q Consensus        52 ~~p~iG~~~~~--~~~~~~~~~~~~~kyG-~v-----~~~~~~~~~~vvv~~p~~i~~i~~~~  106 (511)
                      -+|+.|-.+.=  ..+|.+.+.+|..++. +.     +|+    ..+.|--||+.|++.....
T Consensus        89 ICPFTGKVF~DNt~~nPQDAIYDWvSkCPeN~ER~~G~rV----KRF~VSeDPevIk~Yi~~~  147 (238)
T PF10915_consen   89 ICPFTGKVFGDNTHPNPQDAIYDWVSKCPENTERQGGVRV----KRFFVSEDPEVIKEYIVPR  147 (238)
T ss_pred             EcCCcCccccCCCCCChHHHHHHHHhhCCccchhccCeEE----EEEeecCCHHHHHHhccCC
Confidence            38999976654  5789999999988875 22     333    4567888999999988543


No 56 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=22.57  E-value=1.7e+02  Score=22.70  Aligned_cols=40  Identities=13%  Similarity=0.282  Sum_probs=30.6

Q ss_pred             CCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhc
Q 047291           65 LPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTH  106 (511)
Q Consensus        65 ~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~  106 (511)
                      +-...+.+|.++||.+--..  +...+...|++.++++...+
T Consensus        75 ~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence            34467899999999875432  46678899999999998753


No 57 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=22.17  E-value=2.4e+02  Score=23.70  Aligned_cols=63  Identities=17%  Similarity=0.199  Sum_probs=37.8

Q ss_pred             hhchhhHHHHHHHHHHHHhcCchHHH----------HHHHHHHHHhcCCCcCCc--ccccCchhHHHHHhhhcCC
Q 047291          312 VGGTDSTSTTMEWAMAELVKHPSTMK----------KAQEEVRRVVGKKLKVEA--SDINQMEYLKCVIKESLRL  374 (511)
Q Consensus       312 ~ag~~tt~~~l~~~l~~L~~~p~~~~----------~lr~Ei~~~~~~~~~~~~--~~l~~lp~l~a~i~E~lRl  374 (511)
                      .||..||+-+.--++-.+--++.+.+          ..+.+|.+....+..+++  ...++++.|+.++.|--|-
T Consensus        15 GAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~~GrhisyFgpeANdf~~LE~~f~eYg~~   89 (289)
T COG3954          15 GAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQS   89 (289)
T ss_pred             CCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHHcCCcceecCccccchHHHHHHHHHhccc
Confidence            46777777777777766665554432          223333333333333433  4567899999999887664


No 58 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=21.90  E-value=1.1e+02  Score=27.99  Aligned_cols=70  Identities=11%  Similarity=0.240  Sum_probs=43.3

Q ss_pred             HHHHHhhhcCCCCCC---ccccccccCCccee---c-CeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCC
Q 047291          364 LKCVIKESLRLHAPA---PLLVHRETSSSVKM---G-GYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFM  436 (511)
Q Consensus       364 l~a~i~E~lRl~~~~---~~~~~R~~~~d~~i---~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~  436 (511)
                      -+.+++.|..+.||.   |.++.-..+.|..+   + .-+|..||.|.++.                             
T Consensus       275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~G-----------------------------  325 (361)
T COG1759         275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMGG-----------------------------  325 (361)
T ss_pred             HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccCC-----------------------------
Confidence            355778888888865   44444444555433   1 34677888765541                             


Q ss_pred             CCCcceeecCCCCCCCCCchHHHHHHHHHH
Q 047291          437 GEDFHYIPFGAGRRGCPGTLFGVTSAEGVV  466 (511)
Q Consensus       437 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l  466 (511)
                       +++.++-||.+  +-.||.+|. |+|.++
T Consensus       326 -spYs~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         326 -SPYSNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             -CcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence             34455555544  567999998 777654


No 59 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=21.69  E-value=2.6e+02  Score=19.74  Aligned_cols=37  Identities=14%  Similarity=0.231  Sum_probs=27.4

Q ss_pred             HHHHHHHHhhCCc---EEEeecCcCEEEecCH-----HHHHHHHH
Q 047291           68 RSLRALSKKYGPL---MLIHWGQTPTVIVSSA-----DMAKEMMK  104 (511)
Q Consensus        68 ~~~~~~~~kyG~v---~~~~~~~~~~vvv~~p-----~~i~~i~~  104 (511)
                      +..++++++|.++   +++..++.+-+-|.+.     +.+.+|+.
T Consensus        24 EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq   68 (81)
T PRK10597         24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ   68 (81)
T ss_pred             HHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence            4556778999987   8999998888887543     55666554


No 60 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=21.53  E-value=72  Score=25.49  Aligned_cols=22  Identities=27%  Similarity=0.327  Sum_probs=18.0

Q ss_pred             cCCcceecCeeeCCCcEEEeeh
Q 047291          386 TSSSVKMGGYEIPAKTRVFANA  407 (511)
Q Consensus       386 ~~~d~~i~g~~ip~G~~v~~~~  407 (511)
                      ..+|+.++|..||+|++-+...
T Consensus        52 f~~dv~igGk~l~AG~Ysl~ti   73 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTI   73 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEe
Confidence            3579999999999999776643


No 61 
>PF11857 DUF3377:  Domain of unknown function (DUF3377);  InterPro: IPR021805  This domain is functionally uncharacterised and found at the C terminus of peptidases belonging to MEROPS peptidase family M10A, membrane-type matrix metallopeptidases (clan MA). ; GO: 0004222 metalloendopeptidase activity
Probab=21.20  E-value=96  Score=21.26  Aligned_cols=24  Identities=25%  Similarity=0.495  Sum_probs=12.9

Q ss_pred             hchhhhHHHHHHHHHHHHHHhhCC
Q 047291           19 LLKPVPLSLLLLFLLILFKFIKGG   42 (511)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~   42 (511)
                      .++.+.+.+++.++..++.....+
T Consensus        32 vaVviPl~L~LCiLvl~yai~~fk   55 (74)
T PF11857_consen   32 VAVVIPLVLLLCILVLIYAIFQFK   55 (74)
T ss_pred             EEEeHHHHHHHHHHHHHHHhheee
Confidence            444555555665555555555443


No 62 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=20.96  E-value=2.3e+02  Score=17.72  Aligned_cols=35  Identities=23%  Similarity=0.219  Sum_probs=24.7

Q ss_pred             HHHHHHhhCCcEEEeecC----cCEEEecCHHHHHHHHH
Q 047291           70 LRALSKKYGPLMLIHWGQ----TPTVIVSSADMAKEMMK  104 (511)
Q Consensus        70 ~~~~~~kyG~v~~~~~~~----~~~vvv~~p~~i~~i~~  104 (511)
                      +.+...+||+|-.+.+..    .-+|-..+++..+....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            356778999998887543    34666778888888775


No 63 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=20.07  E-value=1e+02  Score=24.36  Aligned_cols=41  Identities=17%  Similarity=0.170  Sum_probs=32.7

Q ss_pred             HHHhhhcCCCCCCccccccccCCccee--cCeeeCCCcEEEee
Q 047291          366 CVIKESLRLHAPAPLLVHRETSSSVKM--GGYEIPAKTRVFAN  406 (511)
Q Consensus       366 a~i~E~lRl~~~~~~~~~R~~~~d~~i--~g~~ip~G~~v~~~  406 (511)
                      .-++|-+++...+.....+.+.+.+.|  +|+.|-+|..|.+.
T Consensus        84 ~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          84 MPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            457888999988887777777765544  99999999988764


Done!