Query         047291
Match_columns 511
No_of_seqs    195 out of 2034
Neff          11.2
Searched_HMMs 29240
Date          Mon Mar 25 16:50:53 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047291.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047291hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3s79_A Cytochrome P450 19A1; o 100.0 2.2E-77 7.5E-82  595.1  34.1  486    1-510     1-496 (503)
  2 3pm0_A Cypib1, cytochrome P450 100.0 4.6E-77 1.6E-81  593.5  34.3  463   40-510     4-484 (507)
  3 3tbg_A Cytochrome P450 2D6; mo 100.0 1.4E-76 4.8E-81  586.0  36.7  457   43-511     8-477 (479)
  4 3swz_A Steroid 17-alpha-hydrox 100.0 6.3E-76 2.1E-80  582.7  40.2  459   41-510     4-479 (494)
  5 3nxu_A Cytochrome P450 3A4; al 100.0 1.3E-76 4.4E-81  586.8  31.3  453   44-510    13-475 (485)
  6 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.1E-75 3.7E-80  580.1  37.5  448   37-509    16-482 (482)
  7 2fdv_A Cytochrome P450 2A6; CY 100.0 1.2E-74 4.2E-79  570.2  38.1  453   43-510     8-473 (476)
  8 1po5_A Cytochrome P450 2B4; ox 100.0 1.7E-74   6E-79  569.1  39.0  454   43-510     8-473 (476)
  9 2hi4_A Cytochrome P450 1A2; CY 100.0   4E-75 1.4E-79  576.2  34.4  458   41-509    12-487 (495)
 10 3qz1_A Steroid 21-hydroxylase; 100.0 3.4E-75 1.2E-79  578.3  33.6  448   39-511    23-485 (496)
 11 3e6i_A CYPIIE1, P450-J, cytoch 100.0   3E-74   1E-78  568.6  39.3  455   41-511     6-473 (476)
 12 3ld6_A Lanosterol 14-alpha dem 100.0 1.2E-75 4.2E-80  574.9  27.4  441   44-510    10-454 (461)
 13 1r9o_A Cytochrome P450 2C9; mo 100.0 3.4E-74 1.2E-78  567.5  36.5  454   43-510     9-474 (477)
 14 3czh_A Cytochrome P450 2R1; vi 100.0 4.7E-74 1.6E-78  566.1  36.2  455   42-510     9-476 (481)
 15 2ve3_A Putative cytochrome P45 100.0 1.3E-73 4.4E-78  557.2  36.1  436   41-510     8-444 (444)
 16 3n9y_A Cholesterol SIDE-chain  100.0 1.9E-73 6.6E-78  564.3  33.0  453   40-511     4-476 (487)
 17 2cib_A Cytochrome P450 51; hem 100.0 5.6E-72 1.9E-76  547.3  31.4  441   45-510     4-449 (455)
 18 3gw9_A Sterol 14alpha-demethyl 100.0 5.2E-72 1.8E-76  548.8  27.7  439   44-510     2-450 (450)
 19 3mdm_A Cholesterol 24-hydroxyl 100.0 6.1E-71 2.1E-75  541.6  33.1  426   63-510     9-442 (456)
 20 2ij2_A Cytochrome P450 BM3; mo 100.0 1.6E-70 5.3E-75  539.1  35.3  440   45-510     3-452 (470)
 21 3dbg_A Putative cytochrome P45 100.0 8.2E-72 2.8E-76  548.7  24.7  436   44-510    22-462 (467)
 22 3i3k_A Lanosterol 14-alpha dem 100.0 8.7E-71   3E-75  541.0  27.4  442   42-508     8-453 (461)
 23 3v8d_A Cholesterol 7-alpha-mon 100.0 3.1E-68 1.1E-72  526.9  20.2  446   40-509     8-485 (491)
 24 3dax_A Cytochrome P450 7A1; ch 100.0 8.8E-68   3E-72  524.3  23.2  448   42-510    10-486 (491)
 25 2cd8_A Cytochrome P450 monooxy 100.0   5E-65 1.7E-69  493.3  32.3  402   41-511    22-430 (436)
 26 3b6h_A Prostacyclin synthase;  100.0 1.8E-65 6.3E-70  508.2  27.7  448   39-510    12-490 (498)
 27 3b98_A Prostaglandin I2 syntha 100.0 9.1E-66 3.1E-70  507.7  22.7  440   40-511    13-472 (475)
 28 1izo_A P450bsbeta, cytochrome  100.0 3.9E-63 1.3E-67  479.2  34.2  403   53-510     8-416 (417)
 29 1jfb_A Nitric-oxide reductase  100.0 8.6E-63   3E-67  474.7  36.1  375   46-480     2-382 (404)
 30 1ued_A P450 OXYC, P450 monooxy 100.0 1.5E-62   5E-67  472.2  32.1  386   43-505     8-405 (406)
 31 3awm_A Fatty acid alpha-hydrox 100.0 2.5E-62 8.5E-67  473.2  33.4  405   47-510     4-414 (415)
 32 1n97_A CYP175A1; electron tran 100.0 5.7E-64   2E-68  479.8  19.5  383   49-509     3-386 (389)
 33 2zbx_A Cytochrome P450-SU1; be 100.0 8.9E-61   3E-65  460.7  35.5  370   45-480     5-384 (412)
 34 1cpt_A Cytochrome P450-TERP; o 100.0 2.2E-61 7.4E-66  467.7  29.5  382   43-479     4-405 (428)
 35 3aba_A Cytochrome P450; oxidor 100.0   1E-60 3.4E-65  458.9  33.7  381   61-510    16-403 (403)
 36 2jjn_A Cytochrome P450 113A1;  100.0 3.9E-61 1.4E-65  463.3  28.8  371   35-479     9-381 (411)
 37 3a4g_A Vitamin D hydroxylase;  100.0 2.6E-60 8.8E-65  456.6  33.3  380   61-511    17-403 (411)
 38 1odo_A Putative cytochrome P45 100.0 1.3E-60 4.5E-65  459.2  30.8  384   61-508    12-407 (408)
 39 3abb_A CYP105D6, cytochrome P4 100.0 6.8E-61 2.3E-65  461.2  28.8  380   60-510    20-408 (408)
 40 2zwu_A Camphor 5-monooxygenase 100.0   1E-60 3.4E-65  459.7  28.7  392   41-510     7-411 (415)
 41 1s1f_A Putative cytochrome P45 100.0 4.2E-60 1.4E-64  455.1  31.5  388   45-506     8-404 (406)
 42 4fb2_A P450CIN; heme, monooxyg 100.0 1.3E-60 4.3E-65  458.1  27.5  352   61-481    16-371 (398)
 43 3ejb_B Biotin biosynthesis cyt 100.0   5E-60 1.7E-64  455.4  31.3  381   62-510    11-397 (404)
 44 3tyw_A Putative cytochrome P45 100.0 3.7E-59 1.3E-63  450.5  35.8  355   61-480    26-389 (417)
 45 1gwi_A CYP154C1, cytochrome P4 100.0 2.9E-60 9.9E-65  456.6  27.7  382   61-510    14-410 (411)
 46 2dkk_A Cytochrome P450; CYP158 100.0 6.4E-60 2.2E-64  453.5  29.5  376   63-510    26-411 (411)
 47 2xkr_A CYP142, putative cytoch 100.0 1.2E-59 4.1E-64  451.3  30.8  375   63-509    17-396 (398)
 48 3nc3_A Cytochrome P450 CYPX; c 100.0 1.9E-60 6.5E-65  461.5  25.3  386   63-507    52-439 (441)
 49 2y5n_A MYCG, P-450-like protei 100.0 3.1E-59 1.1E-63  449.6  33.5  377   61-505    34-416 (417)
 50 1q5d_A P450 epoxidase; cytochr 100.0 1.5E-59 5.1E-64  453.2  31.0  384   62-511    24-418 (419)
 51 3buj_A CALO2; heme, iron, meta 100.0 1.4E-59 4.8E-64  450.7  29.9  377   63-510    12-397 (397)
 52 3ivy_A Cytochrome P450 CYP125; 100.0 4.5E-60 1.6E-64  458.5  26.2  394   44-510    17-429 (433)
 53 2z36_A MOXA, cytochrome P450 t 100.0 6.5E-59 2.2E-63  447.2  32.7  368   44-480     6-385 (413)
 54 2z3t_A Cytochrome P450; monoxy 100.0   3E-59   1E-63  451.2  30.1  381   62-509    18-416 (425)
 55 2uuq_A CYP130, cytochrome P450 100.0 1.8E-59 6.2E-64  451.2  28.2  376   63-509    24-413 (414)
 56 1z8o_A 6-deoxyerythronolide B  100.0 6.8E-59 2.3E-63  446.7  31.3  374   62-506    12-402 (404)
 57 3dsk_A Cytochrome P450 74A, ch 100.0 2.8E-60 9.7E-65  470.6  20.6  407   42-479    25-471 (495)
 58 3tkt_A Cytochrome P450; aromat 100.0 5.9E-59   2E-63  452.6  29.4  364   66-479    47-427 (450)
 59 2xbk_A PIMD protein; epoxidati 100.0   3E-58   1E-62  440.5  33.2  368   62-505    24-403 (404)
 60 2wm5_A CYP124, putative cytoch 100.0 2.4E-58   8E-63  446.0  32.8  358   64-479    44-414 (435)
 61 3lxh_A Cytochrome P450; heme,  100.0 1.6E-58 5.5E-63  446.6  29.8  379   63-510    37-418 (421)
 62 3mgx_A Putative P450 monooxyge 100.0 5.7E-59 1.9E-63  447.1  26.5  373   63-509    36-415 (415)
 63 3oft_A Cytochrome P450, CYP101 100.0 9.3E-59 3.2E-63  445.4  26.9  353   61-481    21-375 (396)
 64 3dan_A Cytochrome P450 74A2; A 100.0 5.6E-59 1.9E-63  459.0  25.8  406   41-479     5-453 (473)
 65 3r9b_A Cytochrome P450 164A2;  100.0   3E-58   1E-62  445.1  30.4  384   61-510    26-418 (418)
 66 3oo3_A OXY protein; cytochrome 100.0 7.7E-58 2.6E-62  437.1  32.3  348   61-480     9-361 (384)
 67 1lfk_A OXYB, P450 monooxygenas 100.0 2.2E-58 7.4E-63  442.3  27.3  346   67-479    16-375 (398)
 68 1n40_A P450 MT2, cytochrome P4 100.0 1.4E-57 4.7E-62  436.1  29.1  373   61-505    13-395 (396)
 69 3rwl_A Cytochrome P450 alkane  100.0 1.2E-56 4.2E-61  432.8  33.9  358   63-480    37-405 (426)
 70 3p3o_A Cytochrome P450; monoox 100.0 3.4E-56 1.2E-60  429.0  23.9  365   53-480    24-394 (416)
 71 1io7_A Cytochrome P450 CYP119; 100.0 1.1E-55 3.8E-60  418.9  26.8  357   66-510     1-368 (368)
 72 3b4x_A 367AA long hypothetical 100.0   1E-55 3.5E-60  418.3  26.3  355   66-508     1-366 (367)
 73 2wiy_A XPLA-heme, cytochrome P 100.0 2.6E-55 8.8E-60  419.8  28.7  354   63-479    19-373 (394)
 74 2rfb_A Cytochrome P450; heme,  100.0   2E-55 6.8E-60  413.0  25.7  320   75-480     2-324 (343)
 75 4dnj_A Putative cytochrome P45 100.0 2.5E-53 8.5E-58  407.9  27.7  386   51-508    18-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 1.2E-48 4.2E-53  374.2  29.3  356   63-480    36-393 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.8E-46   6E-51  350.7   1.9  312   46-480    35-361 (381)
 78 1m46_B IQ4, IQ4 motif from MYO  53.4      10 0.00035   18.0   1.9   13  334-346     8-20  (26)
 79 2krb_A Eukaryotic translation   32.3      88   0.003   20.5   5.1   38   68-105    22-66  (81)
 80 1use_A VAsp, vasodilator-stimu  32.2      36  0.0012   19.7   2.3   28  334-374    15-42  (45)
 81 2diu_A KIAA0430 protein; struc  29.8   1E+02  0.0034   21.6   4.8   49   56-105    14-65  (96)
 82 1s79_A Lupus LA protein; RRM,   24.3 1.7E+02  0.0059   20.4   5.6   41   66-106    24-72  (103)

No 1  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=2.2e-77  Score=595.06  Aligned_cols=486  Identities=20%  Similarity=0.277  Sum_probs=357.8

Q ss_pred             ChHHHHHHHHHHHHhhhhhchhhhHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCcccccccCCC----CCcHHHHHHHHh
Q 047291            1 MAFVTLLVQLVQELHFATLLKPVPLSLLLLFLLILFKFIKGGNHNLPPCPPKLPIIGNLHQLGN----LPHRSLRALSKK   76 (511)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~iG~~~~~~~----~~~~~~~~~~~k   76 (511)
                      |+..++++.+++.+++.+...++++.++++++.++++..+..+.+.||||+++|++||++.+..    ..+..+.++++|
T Consensus         1 ~~~~~~~~~~~~~~s~~~~~~~~~~~llll~~~~~~~~~~~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~   80 (503)
T 3s79_A            1 MVLEMLNPIHYNITSIVPEAMPAATMPVLLLTGLFLLVWNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRV   80 (503)
T ss_dssp             --------------------------------------------CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             CchhhcccccccchhcchhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHH
Confidence            5667778888887777765444444433333334444445556789999999999999988732    345688899999


Q ss_pred             hCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc-hhhhccCCceeEecCCchhHHHHHHHhhhccCChhHH
Q 047291           77 YGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA-ADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRV  155 (511)
Q Consensus        77 yG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l  155 (511)
                      ||+||++++|+.++++|+||+++++|++++  .|..++.... ......++.+.+++.+|+.|+++|+. +.+.|+...+
T Consensus        81 yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~-~~~~f~~~~l  157 (503)
T 3s79_A           81 YGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKTTRPF-FMKALSGPGL  157 (503)
T ss_dssp             SCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCHHHHHHHTCTTSSSTTCCCHHHHHHHHHH-HHHHTSTHHH
T ss_pred             hCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhhhhhhhhccCCCceeeCCCccHHHHHHHh-hhHhhChHHH
Confidence            999999999999999999999999999643  4555543322 22222334456667789999999999 5789999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHHhcccc-cccccccc
Q 047291          156 QYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGKKANEESKFGTISRRLTTQLQAF-SFGDVFPA  234 (511)
Q Consensus       156 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~  234 (511)
                      +.+.+.+.+.++++++.+.+..++++.+|+.++++.+++++++.++||.++++.+ +.............. .....++.
T Consensus       158 ~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  236 (503)
T 3s79_A          158 VRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSNTLFLRIPLDESA-IVVKIQGYFDAWQALLIKPDIFFK  236 (503)
T ss_dssp             HHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHHHHHHTCCCCCHHH-HHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHHHHHHcCcccCchh-HHHHHHHHHHHHHHHhcCcHHHhh
Confidence            9999999999999999887765566789999999999999999999999886433 222222222221111 11111111


Q ss_pred             chhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCC-ccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhh
Q 047291          235 LGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDD-KSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVG  313 (511)
Q Consensus       235 l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~a  313 (511)
                      +      +...++..+..+.+.+++.+.++++++....+. .....|+++.++++..+    .+++++++.+++..+++|
T Consensus       237 ~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~A  306 (503)
T 3s79_A          237 I------SWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKR----GDLTRENVNQCILEMLIA  306 (503)
T ss_dssp             S------GGGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTCCHHHHHHHHHHT----TSSCHHHHHHHHHHHHHH
T ss_pred             c------chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHhccc----CCCCHHHHHHHHHHHHHH
Confidence            1      122355677888899999999988876543221 12345999999987533    369999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceec
Q 047291          314 GTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMG  393 (511)
Q Consensus       314 g~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~  393 (511)
                      |+|||+++++|++++|++||++|+|+++||+++++ ++.++.+++++||||+|||+|+||++|+++... |.+.+|++++
T Consensus       307 G~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~-r~~~~d~~~~  384 (503)
T 3s79_A          307 APDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVM-RKALEDDVID  384 (503)
T ss_dssp             HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEE-EECSSCEEET
T ss_pred             cccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-CCCCCHHHHhcCHHHHHHHHhhhccCCCccccc-ccccCCeeEC
Confidence            99999999999999999999999999999999998 567899999999999999999999999999876 9999999999


Q ss_pred             CeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhc
Q 047291          394 GYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWF  473 (511)
Q Consensus       394 g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f  473 (511)
                      ||.||||+.|+++.+++|+| ++|+||++|+||||+++.     ....++|||+|+|.|+|++||.+|++++++.|+++|
T Consensus       385 g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~~-----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f  458 (503)
T 3s79_A          385 GYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNV-----PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRF  458 (503)
T ss_dssp             TEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSCC-----CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTE
T ss_pred             CEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCCC-----CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhe
Confidence            99999999999999999998 999999999999999752     345799999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCccccCceecccCc---eeEEeeccC
Q 047291          474 DWKLPGDTVGEDLDMTETFGLTVFKKIP---LYLVPVMYS  510 (511)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~r~  510 (511)
                      +++++++...+  +.....+.+..|+..   +.+++++|+
T Consensus       459 ~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~v~~~~R~  496 (503)
T 3s79_A          459 HVKTLQGQCVE--SIQKIHDLSLHPDETKNMLEMIFTPRN  496 (503)
T ss_dssp             EEEESTTCCTT--TSCEEESSSEEECTTSCCCCEEEEECC
T ss_pred             EEEeCCCCCcc--ccccccceeecCCCccceeeEEeccCC
Confidence            99988765332  344445666677665   888888886


No 2  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.6e-77  Score=593.53  Aligned_cols=463  Identities=23%  Similarity=0.412  Sum_probs=352.7

Q ss_pred             hCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccch
Q 047291           40 KGGNHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAA  119 (511)
Q Consensus        40 ~~~~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~  119 (511)
                      ++++.+.||||+++|++||++.+..+++..+.++++|||+||++++++.++++|+||+++++|+.++...|.+++.....
T Consensus         4 ~~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~   83 (507)
T 3pm0_A            4 KTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF   83 (507)
T ss_dssp             ------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred             ccCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence            34456789999999999999999888999999999999999999999999999999999999998777778777665544


Q ss_pred             hhhccCCceeEecCCchhHHHHHHHhhhccCChhH------HhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHH
Q 047291          120 DIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQR------VQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVT  193 (511)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~------l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~  193 (511)
                      .... ++.+.+++.+|+.|+++|+.+ .+.|+...      ++.+.+.+.+.++.+++.+.+...++..+|+.+++..++
T Consensus        84 ~~~~-~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~  161 (507)
T 3pm0_A           84 RVVS-GGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAV  161 (507)
T ss_dssp             HHGG-GGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHH
T ss_pred             Hhhc-CCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHH
Confidence            3333 344555677799999999994 55544322      234889999999999999987655678899999999999


Q ss_pred             HHhhhhhhccccccchh-hHHHH---HHHHHHhccccccccccccchhhhhc-cCchHHHHHHHHHHHHHHHHHHHHHHh
Q 047291          194 NDTVGRCVFGKKANEES-KFGTI---SRRLTTQLQAFSFGDVFPALGWMDHL-TGLIPCVKATFRSLDAFFDDVIAEHRN  268 (511)
Q Consensus       194 ~~~~~~~~fG~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~p~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~  268 (511)
                      +++++.++||.+++..+ ++...   ...+........+...+|++.++... ....+...+..+.+.+++.+.++++++
T Consensus       162 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  241 (507)
T 3pm0_A          162 ANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCE  241 (507)
T ss_dssp             HHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999986433 22222   22333333333455566766554211 112455667778888899999988876


Q ss_pred             ccCCCCccccccHHHHHHHhcccccc------ccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHH
Q 047291          269 LERPDDKSVAKDFVDILLQVQKDATT------KHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEE  342 (511)
Q Consensus       269 ~~~~~~~~~~~~~~~~ll~~~~~~~~------~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~E  342 (511)
                      ....  .....|+++.+++.......      ...++++++.+++..+++||+|||+++++|++++|++||++|+|||+|
T Consensus       242 ~~~~--~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~E  319 (507)
T 3pm0_A          242 SLRP--GAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAE  319 (507)
T ss_dssp             HCCT--TCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             cccc--ccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            5432  23467899999965433211      125899999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCC
Q 047291          343 VRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEE  422 (511)
Q Consensus       343 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  422 (511)
                      |++++++++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++
T Consensus       320 i~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~  399 (507)
T 3pm0_A          320 LDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPEN  399 (507)
T ss_dssp             HHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSSSS
T ss_pred             HHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccCCCcCc
Confidence            99999888889999999999999999999999999998778999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCCCCCCCC-CCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCc
Q 047291          423 FIPERFYNNPVNFMG-EDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIP  501 (511)
Q Consensus       423 F~p~R~~~~~~~~~~-~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (511)
                      |+||||++++..... .+..++|||+|+|.|+|++||.+|++++++.|+++|||++.++..   .+.....+++..|+ +
T Consensus       400 F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~-~  475 (507)
T 3pm0_A          400 FDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP---AKMNFSYGLTIKPK-S  475 (507)
T ss_dssp             CCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCC---SCCCEEESSSEEEC-S
T ss_pred             cCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCC---CCCCCCCCccccCC-C
Confidence            999999986543211 235799999999999999999999999999999999999876532   33444456555554 5


Q ss_pred             eeEEeeccC
Q 047291          502 LYLVPVMYS  510 (511)
Q Consensus       502 ~~~~~~~r~  510 (511)
                      +.|++++|+
T Consensus       476 ~~v~~~~R~  484 (507)
T 3pm0_A          476 FKVNVTLRE  484 (507)
T ss_dssp             CCEEEEESS
T ss_pred             cEEEEEEcc
Confidence            678888775


No 3  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=1.4e-76  Score=585.96  Aligned_cols=457  Identities=24%  Similarity=0.404  Sum_probs=352.2

Q ss_pred             CCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhh
Q 047291           43 NHNLPPCPPKLPIIGNLHQL-GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADI  121 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~  121 (511)
                      +.+.||||+++|++||++.+ ..+++..+.+|++|||+||++++|+.++|+|+||+++++|+.++...|..++.......
T Consensus         8 ~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~   87 (479)
T 3tbg_A            8 KGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI   87 (479)
T ss_dssp             -CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGG
T ss_pred             CCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHH
Confidence            34689999999999999988 46778899999999999999999999999999999999999888888887776655554


Q ss_pred             hccC--CceeEecCCchhHHHHHHHhhhccCChhHHh--hhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhh
Q 047291          122 FLYG--CIDIAFSPYGEYWREIRRIGVHELLSPQRVQ--YFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTV  197 (511)
Q Consensus       122 ~~~~--~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~  197 (511)
                      ...+  +.+.+++.+|+.|+++|+. +.+.|+...+.  .+.+.+......+...+...  +++.+|+.+++..++++++
T Consensus        88 ~~~~~~~~~~~~~~~g~~w~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~  164 (479)
T 3tbg_A           88 LGFGPRSQGVFLARYGPAWREQRRF-SVSTLRNLGLGKKSLEQWVTEEAACLCAAFANH--SGRPFRPNGLLDKAVSNVI  164 (479)
T ss_dssp             GTCBTTBCCSTTCCSSHHHHHHHHH-HHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTT--TTCCBCTHHHHHHHHHHHH
T ss_pred             hccCCCCCceeeCCCCHHHHHHHHH-HHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhc--cCCcccHHHHHHHHHHHHH
Confidence            4333  2345667789999999999 45666655543  34555666666666655543  4578999999999999999


Q ss_pred             hhhhccccccchh-hHHHHHHHHHHhcccc-----ccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 047291          198 GRCVFGKKANEES-KFGTISRRLTTQLQAF-----SFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLER  271 (511)
Q Consensus       198 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (511)
                      +.++||.+++..+ ................     ......|+..++   .....+.....+...+.+.+.+++......
T Consensus       165 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (479)
T 3tbg_A          165 ASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI---PALAGKVLRFQKAFLTQLDELLTEHRMTWD  241 (479)
T ss_dssp             HHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS---HHHHHHHTHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc---hhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999987543 2222222221111110     111112222221   122233444555666666666666655432


Q ss_pred             CCCccccccHHHHHHHhccc--cccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcC
Q 047291          272 PDDKSVAKDFVDILLQVQKD--ATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGK  349 (511)
Q Consensus       272 ~~~~~~~~~~~~~ll~~~~~--~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  349 (511)
                      .  .....|+.+.++.....  ......++++++.+++.++++||+|||+++++|++++|++||++|+|||+||+++++.
T Consensus       242 ~--~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~  319 (479)
T 3tbg_A          242 P--AQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ  319 (479)
T ss_dssp             T--TSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS
T ss_pred             c--ccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhh
Confidence            2  23345555555533221  1223579999999999999999999999999999999999999999999999999998


Q ss_pred             CCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcC
Q 047291          350 KLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFY  429 (511)
Q Consensus       350 ~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~  429 (511)
                      ++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||+
T Consensus       320 ~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl  399 (479)
T 3tbg_A          320 VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL  399 (479)
T ss_dssp             SSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGB
T ss_pred             ccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccC
Confidence            88899999999999999999999999999999878889999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          430 NNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       430 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      +.+.+. .++..|+|||+|+|.|+|++||++|+++++|.||++|||+++++..  .+......+++..| .++.+++++|
T Consensus       400 ~~~~~~-~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~P-~~~~v~~~pR  475 (479)
T 3tbg_A          400 DAQGHF-VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQP--RPSHHGVFAFLVSP-SPYELCAVPR  475 (479)
T ss_dssp             CTTCCB-CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSC--CCCSCEEESSSEEE-CCCCBEEEEC
T ss_pred             CCCccc-CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCC--CccccccceeeecC-CCeEEEEEEC
Confidence            876443 3567899999999999999999999999999999999999887643  23344455666655 4788888888


Q ss_pred             CC
Q 047291          510 SA  511 (511)
Q Consensus       510 ~~  511 (511)
                      +.
T Consensus       476 s~  477 (479)
T 3tbg_A          476 HH  477 (479)
T ss_dssp             --
T ss_pred             CC
Confidence            73


No 4  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=6.3e-76  Score=582.73  Aligned_cols=459  Identities=24%  Similarity=0.404  Sum_probs=367.8

Q ss_pred             CCCCCCCCCCCCCCcccccccCC--CCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc
Q 047291           41 GGNHNLPPCPPKLPIIGNLHQLG--NLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA  118 (511)
Q Consensus        41 ~~~~~~~pgp~~~p~iG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~  118 (511)
                      +++.+.||||+++|++||++.+.  +.++..+.+|++|||+||++++|+.++++|+||+++++|+.++...|.+++....
T Consensus         4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~   83 (494)
T 3swz_A            4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT   83 (494)
T ss_dssp             --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred             CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence            34567899999999999999884  3567889999999999999999999999999999999999988888888877655


Q ss_pred             hhhhccCCceeEecCCchhHHHHHHHhhhccCCh--hHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHh
Q 047291          119 ADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSP--QRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDT  196 (511)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~  196 (511)
                      ......++.+.+++.+|+.|+.+|+. ..+.|+.  ..++.+.+.+.+.++.+++.+...  +++.+|+..++..+++++
T Consensus        84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~-~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~t~dv  160 (494)
T 3swz_A           84 LDIASNNRKGIAFADSGAHWQLHRRL-AMATFALFKDGDQKLEKIICQEISTLCDMLATH--NGQSIDISFPVFVAVTNV  160 (494)
T ss_dssp             HHHHTTTTCSSSSSCSSHHHHHHHHH-HHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT--TTEEECCHHHHHHHHHHH
T ss_pred             HHHhccCCCCeEeCCCCHHHHHHHHH-HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHc--CCCcccHHHHHHHHHHHH
Confidence            54444334455667679999999999 5666763  456778999999999999998763  467899999999999999


Q ss_pred             hhhhhccccccchhhHHHHHH----HHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 047291          197 VGRCVFGKKANEESKFGTISR----RLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERP  272 (511)
Q Consensus       197 ~~~~~fG~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (511)
                      ++.++||.+++..++....+.    .+........+.+.+|++.+++.  ...+..++..+.+.++++..++++++... 
T Consensus       161 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  237 (494)
T 3swz_A          161 ISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN--KTLEKLKSHVKIRNDLLNKILENYKEKFR-  237 (494)
T ss_dssp             HHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC--SHHHHHHHHHHHHHHHHHHHHHHHTTTCC-
T ss_pred             HHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc--HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            999999998865433222222    22233333456667787765532  23455667777888888888887765432 


Q ss_pred             CCccccccHHHHHHHhccccc--------cccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 047291          273 DDKSVAKDFVDILLQVQKDAT--------TKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVR  344 (511)
Q Consensus       273 ~~~~~~~~~~~~ll~~~~~~~--------~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  344 (511)
                        .....|+++.|+++..+..        ....++++++..++..+++||+|||+++++|++++|++||++|+|+++||+
T Consensus       238 --~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  315 (494)
T 3swz_A          238 --SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEID  315 (494)
T ss_dssp             --TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             --ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence              2345789999998643211        123589999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCC
Q 047291          345 RVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFI  424 (511)
Q Consensus       345 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  424 (511)
                      ++++.++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+
T Consensus       316 ~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~  395 (494)
T 3swz_A          316 QNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFM  395 (494)
T ss_dssp             HHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCC
T ss_pred             HhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCC
Confidence            99998888999999999999999999999999999988899999999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCCC-CCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCcee
Q 047291          425 PERFYNNPVNF-MGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLY  503 (511)
Q Consensus       425 p~R~~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (511)
                      ||||++++... ...+..++|||+|+|.|+|++||.+|++++++.|+++|+|+++++..  .+......+.+.. +.+++
T Consensus       396 PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~-p~~~~  472 (494)
T 3swz_A          396 PERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ--LPSLEGIPKVVFL-IDSFK  472 (494)
T ss_dssp             GGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCC--CCCCSCEESSSEE-CCCCC
T ss_pred             cccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCC--CCCCCCccceeec-CCCcE
Confidence            99999765432 12456899999999999999999999999999999999999876543  2233334455444 45777


Q ss_pred             EEeeccC
Q 047291          504 LVPVMYS  510 (511)
Q Consensus       504 ~~~~~r~  510 (511)
                      +++++|+
T Consensus       473 v~~~~R~  479 (494)
T 3swz_A          473 VKIKVRQ  479 (494)
T ss_dssp             EEEEECH
T ss_pred             EEEEEcC
Confidence            8877774


No 5  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=1.3e-76  Score=586.78  Aligned_cols=453  Identities=23%  Similarity=0.347  Sum_probs=355.2

Q ss_pred             CCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhc-CcccccCCCccchhhh
Q 047291           44 HNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTH-DIIFSNRPKTTAADIF  122 (511)
Q Consensus        44 ~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~-~~~~~~~~~~~~~~~~  122 (511)
                      .+.+|||+++|++||++.+..+++.++.++++|||+||++++|+.++|+|+||+++++|+.++ ...|..++........
T Consensus        13 ~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~~   92 (485)
T 3nxu_A           13 KLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM   92 (485)
T ss_dssp             HHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGGG
T ss_pred             hCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccccc
Confidence            346999999999999999987889999999999999999999999999999999999999876 4556655443322211


Q ss_pred             ccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhc
Q 047291          123 LYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVF  202 (511)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  202 (511)
                         + +.+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++.+++.+.+...+++++|+.+++..+++++++.++|
T Consensus        93 ---~-~~l~~~~g~~w~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~f  167 (485)
T 3nxu_A           93 ---K-SAISIAEDEEWKRLRSL-LSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSF  167 (485)
T ss_dssp             ---G-GSTTTCCHHHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             ---c-cCccccCCcHHHHHHhh-cChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHc
Confidence               1 34556689999999999 578999999999999999999999999987655678999999999999999999999


Q ss_pred             cccccch----hhHHHHHHHHHHhccc---cccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 047291          203 GKKANEE----SKFGTISRRLTTQLQA---FSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDK  275 (511)
Q Consensus       203 G~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  275 (511)
                      |.+++..    +.+.............   ......+|++.++..........+...+.+.+++++.++++.+..    .
T Consensus       168 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  243 (485)
T 3nxu_A          168 GVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT----Q  243 (485)
T ss_dssp             SCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred             CCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhcc----C
Confidence            9998642    2232222211100000   001123343322211111111112334455555666665554321    3


Q ss_pred             cccccHHHHHHHhccccc--cccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcC
Q 047291          276 SVAKDFVDILLQVQKDAT--TKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKV  353 (511)
Q Consensus       276 ~~~~~~~~~ll~~~~~~~--~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  353 (511)
                      ....|+++.++++..+..  ....++++++.++++.+++||+|||+++++|++++|++||++|+||++||++++++++.+
T Consensus       244 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  323 (485)
T 3nxu_A          244 KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP  323 (485)
T ss_dssp             --CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCCC
T ss_pred             CCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCCC
Confidence            445799999998754321  124699999999999999999999999999999999999999999999999999888889


Q ss_pred             CcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCC
Q 047291          354 EASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPV  433 (511)
Q Consensus       354 ~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~  433 (511)
                      +.+++++||||+|||+|+||++|+++. .+|++.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++++.
T Consensus       324 ~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~  402 (485)
T 3nxu_A          324 TYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK  402 (485)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHHH
T ss_pred             CHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCcc
Confidence            999999999999999999999999987 5699999999999999999999999999999999999999999999997532


Q ss_pred             CCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          434 NFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       434 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      . ...+..++|||+|+|.|+|++||++|++++++.|+++|+|++.++..   .+.....+.+..|+.++.+++++|+
T Consensus       403 ~-~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~r~  475 (485)
T 3nxu_A          403 D-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ---IPLKLSLGGLLQPEKPVVLKVESRD  475 (485)
T ss_dssp             T-TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCC---SSCCBCSSSSCCBSSCCEEEEEEC-
T ss_pred             c-cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCC---CCcccCCCeeccCCCCeEEEEEEcc
Confidence            2 22456799999999999999999999999999999999999876532   1233344556788899999999986


No 6  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=1.1e-75  Score=580.11  Aligned_cols=448  Identities=18%  Similarity=0.266  Sum_probs=360.0

Q ss_pred             HHhhCCCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccc
Q 047291           37 KFIKGGNHNLPPCPPKLPIIGNLHQL-----GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFS  111 (511)
Q Consensus        37 ~~~~~~~~~~~pgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~  111 (511)
                      +....++++.+|||+++|++||++.+     .++++..+.++++|||+||++++|+.+.|+++||+++++|+.++ ..|.
T Consensus        16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~   94 (482)
T 3k9v_A           16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHP   94 (482)
T ss_dssp             ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSC
T ss_pred             cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCC
Confidence            44455788899999999999998876     23567889999999999999999999999999999999999864 4566


Q ss_pred             cCCCccch---hhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhcc-CCCceeHHH
Q 047291          112 NRPKTTAA---DIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASL-KGASVNLSE  187 (511)
Q Consensus       112 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~vdl~~  187 (511)
                      +++.....   .... +...++++.+|+.|+++|+.+.+.++++..++.+.+.+.+.++.+++.+.+... +++++|+.+
T Consensus        95 ~r~~~~~~~~~~~~~-~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~  173 (482)
T 3k9v_A           95 QRLEIKPWKAYRDHR-NEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYS  173 (482)
T ss_dssp             CCCCCHHHHHHHHHH-TCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHH
T ss_pred             CCCCchHHHHHHHhc-CCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHH
Confidence            65543221   1111 122445666799999999996544568888999999999999999999987643 466899999


Q ss_pred             HHHHHHHHhhhhhhccccccc--------hhhHHHHHHHHHHhccccccccccc--cchhhhhccCchHHHHHHHHHHHH
Q 047291          188 MLLTVTNDTVGRCVFGKKANE--------ESKFGTISRRLTTQLQAFSFGDVFP--ALGWMDHLTGLIPCVKATFRSLDA  257 (511)
Q Consensus       188 ~~~~~~~~~~~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p--~l~~l~~~~~~~~~~~~~~~~~~~  257 (511)
                      ++..+++++++.++||.+++.        ...+...+........   ....+|  +..++.  ....+...+..+.+.+
T Consensus       174 ~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~l~--~~~~~~~~~~~~~~~~  248 (482)
T 3k9v_A          174 ELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFG---KMMVTPVELHKRLN--TKVWQAHTLAWDTIFK  248 (482)
T ss_dssp             HHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGG---GGSSSCHHHHHHHT--CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHH---HHHhhhHHHHHhcC--CHHHHHHHHHHHHHHH
Confidence            999999999999999998842        1234444444333222   222233  111221  1123345566677778


Q ss_pred             HHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHH
Q 047291          258 FFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMK  337 (511)
Q Consensus       258 ~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~  337 (511)
                      ++.+.++++++....   ....|++..+++.       ..++++++.+++..+++||+|||+++++|++++|++||++|+
T Consensus       249 ~~~~~i~~r~~~~~~---~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~  318 (482)
T 3k9v_A          249 SVKPCIDNRLQRYSQ---QPGADFLCDIYQQ-------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQR  318 (482)
T ss_dssp             HHHHHHHHHHHHTTT---CTTSCHHHHHHHH-------TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred             HHHHHHHHHHHHhcc---CCchHHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHH
Confidence            888888888765322   2346778777763       258999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCC
Q 047291          338 KAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLW  417 (511)
Q Consensus       338 ~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~  417 (511)
                      ||++||++++++++.++.+++++||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|+++.+.+|+||++|
T Consensus       319 kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~  397 (482)
T 3k9v_A          319 RLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFT-TRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNF  397 (482)
T ss_dssp             HHHHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEE-EEECSSCEEETTEEECTTCEEEEECSGGGGCTTTC
T ss_pred             HHHHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCc-ccccCCceeeCCEEECCCCEEEEccccccCCCccC
Confidence            99999999998888899999999999999999999999999984 69999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceec
Q 047291          418 DNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVF  497 (511)
Q Consensus       418 ~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  497 (511)
                      +||++|+||||++++..  ..+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.+   +  +.....+..
T Consensus       398 ~~p~~F~PeRfl~~~~~--~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~--~~~~~~~~~  470 (482)
T 3k9v_A          398 EDSHKFRPERWLQKEKK--INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEP---V--EMLHLGILV  470 (482)
T ss_dssp             SSTTSCCGGGGTCTTSC--CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCC---C--CEEESSSEE
T ss_pred             CCcCccCccccCCCCCC--CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCC---c--ccccceeec
Confidence            99999999999986542  3567899999999999999999999999999999999999865432   2  233455678


Q ss_pred             ccCceeEEeecc
Q 047291          498 KKIPLYLVPVMY  509 (511)
Q Consensus       498 ~~~~~~~~~~~r  509 (511)
                      |+.++.+++++|
T Consensus       471 p~~~~~~~~~~R  482 (482)
T 3k9v_A          471 PSRELPIAFRPR  482 (482)
T ss_dssp             ESSSCCEEEEEC
T ss_pred             CCCCcceEEeeC
Confidence            999999999887


No 7  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=1.2e-74  Score=570.18  Aligned_cols=453  Identities=25%  Similarity=0.413  Sum_probs=361.5

Q ss_pred             CCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhh
Q 047291           43 NHNLPPCPPKLPIIGNLHQL-GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADI  121 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~  121 (511)
                      +.+.||||+++|++||++.+ ..+++..+.+++++||+||++++++.+.++|+||+++++|+.++...|+.++.......
T Consensus         8 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~   87 (476)
T 2fdv_A            8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW   87 (476)
T ss_dssp             CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH
T ss_pred             cCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh
Confidence            34679999999999999988 56788999999999999999999999999999999999999766666665544332222


Q ss_pred             hccCCceeEecCCchhHHHHHHHhhhccCChhHH--hhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhh
Q 047291          122 FLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRV--QYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGR  199 (511)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~  199 (511)
                      .. ++.+ ++..+|+.|+++|+. +.+.|+...+  +.+.+.+.+.++.+++.+.+.  +++++|+.+++..+++++++.
T Consensus        88 ~~-~~~~-l~~~~g~~~~~~Rr~-~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~  162 (476)
T 2fdv_A           88 VF-KGYG-VVFSNGERAKQLRRF-SIATLRDFGVGKRGIEERIQEEAGFLIDALRGT--GGANIDPTFFLSRTVSNVISS  162 (476)
T ss_dssp             HH-TTCS-SSSCCHHHHHHHHHH-HHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHH
T ss_pred             hc-CCCC-eEecCchHHHHHHHH-HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHH
Confidence            22 2333 445579999999999 5778877666  789999999999999999763  356899999999999999999


Q ss_pred             hhccccccch-hhHHHHHHHHHHhccc---c--cccccccc-chhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 047291          200 CVFGKKANEE-SKFGTISRRLTTQLQA---F--SFGDVFPA-LGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERP  272 (511)
Q Consensus       200 ~~fG~~~~~~-~~~~~~~~~~~~~~~~---~--~~~~~~p~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (511)
                      ++||.+++.. +++......+......   .  .+.+.+|+ +.++   ++..+...++.+.+.+++.+.++++++... 
T Consensus       163 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l---~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-  238 (476)
T 2fdv_A          163 IVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL---PGPQQQAFQLLQGLEDFIAKKVEHNQRTLD-  238 (476)
T ss_dssp             HHHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTS---CSHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred             HHcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhc---CcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            9999988632 2333333322222110   0  12234454 2222   233345667788899999999998876432 


Q ss_pred             CCccccccHHHHHHHhcccc--ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCC
Q 047291          273 DDKSVAKDFVDILLQVQKDA--TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKK  350 (511)
Q Consensus       273 ~~~~~~~~~~~~ll~~~~~~--~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  350 (511)
                        .....|+++.++++..+.  .....++++++++++..+++||+|||+++++|++++|++||++|++||+||+++++++
T Consensus       239 --~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  316 (476)
T 2fdv_A          239 --PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN  316 (476)
T ss_dssp             --TTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS
T ss_pred             --CCCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCC
Confidence              123479999999764321  1124689999999999999999999999999999999999999999999999999877


Q ss_pred             CcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCC
Q 047291          351 LKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYN  430 (511)
Q Consensus       351 ~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~  430 (511)
                      +.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++|+||++|+||++||||||++
T Consensus       317 ~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~  396 (476)
T 2fdv_A          317 RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLN  396 (476)
T ss_dssp             SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBC
T ss_pred             CCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCC
Confidence            77899999999999999999999999999767799999999999999999999999999999999999999999999997


Q ss_pred             CCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCcc-ccCceecccCceeEEeecc
Q 047291          431 NPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTE-TFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       431 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r  509 (511)
                      .+... ..+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++..  .++... ..+.+..| .++.+++++|
T Consensus       397 ~~~~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~v~~~~R  472 (476)
T 2fdv_A          397 EKGQF-KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPK--DIDVSPKHVGFATIP-RNYTMSFLPR  472 (476)
T ss_dssp             TTSCB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG--GCCCSCSEESSSEEC-CCCCEEEEEC
T ss_pred             CCCCC-CCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCC--CCCccccccceeecC-CceEEEEEec
Confidence            54332 2456899999999999999999999999999999999999876542  122333 45666666 6888998888


Q ss_pred             C
Q 047291          510 S  510 (511)
Q Consensus       510 ~  510 (511)
                      +
T Consensus       473 ~  473 (476)
T 2fdv_A          473 H  473 (476)
T ss_dssp             -
T ss_pred             c
Confidence            6


No 8  
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=1.7e-74  Score=569.08  Aligned_cols=454  Identities=24%  Similarity=0.413  Sum_probs=360.4

Q ss_pred             CCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhh
Q 047291           43 NHNLPPCPPKLPIIGNLHQL-GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADI  121 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~  121 (511)
                      +.+.||||+++|++||++.+ ..+++..+.+++++||+||++++++.+.++|+||+++++|+.++...|.+++.......
T Consensus         8 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~   87 (476)
T 1po5_A            8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDP   87 (476)
T ss_dssp             -CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCS
T ss_pred             CCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHh
Confidence            34679999999999999988 67788999999999999999999988999999999999999766666665543322222


Q ss_pred             hccCCceeEecCCchhHHHHHHHhhhccCChh--HHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhh
Q 047291          122 FLYGCIDIAFSPYGEYWREIRRIGVHELLSPQ--RVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGR  199 (511)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~  199 (511)
                      .. ++.+ ++..+|+.|+++|+. +.+.|++.  .++.+.+.+.+.++.+++.+.+.  .++++|+.+++..+++++++.
T Consensus        88 ~~-~~~~-l~~~~g~~w~~~Rr~-~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~  162 (476)
T 1po5_A           88 IF-QGYG-VIFANGERWRALRRF-SLATMRDFGMGKRSVEERIQEEARCLVEELRKS--KGALLDNTLLFHSITSNIICS  162 (476)
T ss_dssp             CC-SSCC-CCCSSHHHHHHHHHH-HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHH
T ss_pred             hc-CCCc-eEecCCcHHHHHHHH-HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHHHHH
Confidence            11 2333 445589999999998 56777766  45678999999999999999764  356899999999999999999


Q ss_pred             hhccccccch-hhHHHHHHHHHHhcccc-----ccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047291          200 CVFGKKANEE-SKFGTISRRLTTQLQAF-----SFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPD  273 (511)
Q Consensus       200 ~~fG~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  273 (511)
                      ++||.+++.. +++......+.......     .....+|++  +..++...++..+..+.+.+++.+.++++++...  
T Consensus       163 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~--~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--  238 (476)
T 1po5_A          163 IVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGF--LKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLD--  238 (476)
T ss_dssp             HHHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHH--HHTSSCSHHHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred             HHcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHH--HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            9999987633 34444444443333111     112234431  1122233355677788899999999998876432  


Q ss_pred             CccccccHHHHHHHhcccc--ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCC
Q 047291          274 DKSVAKDFVDILLQVQKDA--TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKL  351 (511)
Q Consensus       274 ~~~~~~~~~~~ll~~~~~~--~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  351 (511)
                       .....|+++.|+....+.  .....++++++.+++..+++||+|||+++++|++++|++||++|+||++||+++++.++
T Consensus       239 -~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  317 (476)
T 1po5_A          239 -PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR  317 (476)
T ss_dssp             -TTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS
T ss_pred             -CCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence             123468999998654321  11235889999999999999999999999999999999999999999999999998777


Q ss_pred             cCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCC
Q 047291          352 KVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNN  431 (511)
Q Consensus       352 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  431 (511)
                      .++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.
T Consensus       318 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~  397 (476)
T 1po5_A          318 PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA  397 (476)
T ss_dssp             CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCT
T ss_pred             CCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCC
Confidence            78999999999999999999999999997677999999999999999999999999999999999999999999999975


Q ss_pred             CCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCcc-ccCceecccCceeEEeeccC
Q 047291          432 PVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTE-TFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       432 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~  510 (511)
                      +.... .+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++..  .++... ..+++..| .++.+++++|+
T Consensus       398 ~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~v~~~~R~  473 (476)
T 1po5_A          398 NGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPE--DIDLTPRESGVGNVP-PSYQIRFLARH  473 (476)
T ss_dssp             TSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGG--GCCCCCCSTTSSCCC-CCCCBEEEECC
T ss_pred             CCCcc-CCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCC--CCCccCCcCceeecC-cceEEEEEecC
Confidence            43322 356899999999999999999999999999999999999876532  122223 44555555 67888888875


No 9  
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=4e-75  Score=576.19  Aligned_cols=458  Identities=24%  Similarity=0.431  Sum_probs=359.2

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchh
Q 047291           41 GGNHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAAD  120 (511)
Q Consensus        41 ~~~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~  120 (511)
                      .++.+.+|||+++|++|+++.+.++++..+.+++++||+||++++++.++++++||+++++|+.++...|++++......
T Consensus        12 ~~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~   91 (495)
T 2hi4_A           12 PKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTST   91 (495)
T ss_dssp             CTTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHH
T ss_pred             CCCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHH
Confidence            34455569999999999998887788899999999999999999999999999999999999987766676665443222


Q ss_pred             hhccCCceeEec-CCchhHHHHHHHhhhccCC---hhHH---h---hhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHH
Q 047291          121 IFLYGCIDIAFS-PYGEYWREIRRIGVHELLS---PQRV---Q---YFQFVRDEETADMINKLRRASLKGASVNLSEMLL  190 (511)
Q Consensus       121 ~~~~~~~~~~~~-~~~~~~~~~R~~~~~~~~~---~~~l---~---~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~  190 (511)
                      ... ++.+.+++ .+|+.|+++|+.+ .+.|+   ...+   +   .+.+.+.+.++.+++.+.+...+++++|+.+++.
T Consensus        92 ~~~-~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~  169 (495)
T 2hi4_A           92 LIT-DGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVV  169 (495)
T ss_dssp             TST-TSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHH
T ss_pred             Hhc-CCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHH
Confidence            221 23344444 3699999999994 55543   2222   2   6899999999999999987545567899999999


Q ss_pred             HHHHHhhhhhhccccccch-hhHHHHH---HHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHH
Q 047291          191 TVTNDTVGRCVFGKKANEE-SKFGTIS---RRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEH  266 (511)
Q Consensus       191 ~~~~~~~~~~~fG~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (511)
                      .+++++++.++||.+++.. +++....   ..+............+|++.++..  ...++..++.+.+.+++.+.|+++
T Consensus       170 ~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~r  247 (495)
T 2hi4_A          170 VSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN--PALQRFKAFNQRFLWFLQKTVQEH  247 (495)
T ss_dssp             HHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc--hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987632 2333322   222222222223455666544321  123456677888999999999988


Q ss_pred             HhccCCCCccccccHHHHHHHhcccc--ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 047291          267 RNLERPDDKSVAKDFVDILLQVQKDA--TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVR  344 (511)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  344 (511)
                      ++...   .....|+++.+++...+.  .....++++++.+++..+++||+|||+++++|++++|++||++|+||++||+
T Consensus       248 ~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  324 (495)
T 2hi4_A          248 YQDFD---KNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELD  324 (495)
T ss_dssp             HHTCC---TTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             HHhhc---ccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence            76532   123478999999653221  1123589999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCC
Q 047291          345 RVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFI  424 (511)
Q Consensus       345 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  424 (511)
                      ++++.++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+
T Consensus       325 ~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~  404 (495)
T 2hi4_A          325 TVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFR  404 (495)
T ss_dssp             HHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTSCC
T ss_pred             HhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCccC
Confidence            99988778999999999999999999999999999877899999999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCCCC--CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCce
Q 047291          425 PERFYNNPVNFM--GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPL  502 (511)
Q Consensus       425 p~R~~~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (511)
                      ||||++.+....  ..+..++|||+|+|.|+|++||++|++++++.|+++|++++.++..   .+.....+++..|+..+
T Consensus       405 PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~~~~  481 (495)
T 2hi4_A          405 PERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK---VDLTPIYGLTMKHARCE  481 (495)
T ss_dssp             GGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCC---CCCCCBCSSSCBCCCCC
T ss_pred             cccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCC---CCccccCCceecCCCcc
Confidence            999997543200  1345789999999999999999999999999999999999876532   22333446555555332


Q ss_pred             eEEeecc
Q 047291          503 YLVPVMY  509 (511)
Q Consensus       503 ~~~~~~r  509 (511)
                      .++++ |
T Consensus       482 ~v~~~-R  487 (495)
T 2hi4_A          482 HVQAR-R  487 (495)
T ss_dssp             CBEEE-C
T ss_pred             eEEEE-E
Confidence            66666 5


No 10 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=3.4e-75  Score=578.26  Aligned_cols=448  Identities=23%  Similarity=0.369  Sum_probs=351.1

Q ss_pred             hhCCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCcc
Q 047291           39 IKGGNHNLPPCPPKLPIIGNLHQL-GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTT  117 (511)
Q Consensus        39 ~~~~~~~~~pgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~  117 (511)
                      ++.++.+.||||++      ++.+ .++++..+.++++|||+||++++|+.++++|+||+++++|+.++...|++++...
T Consensus        23 ~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~   96 (496)
T 3qz1_A           23 WKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIP   96 (496)
T ss_dssp             ------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCT
T ss_pred             hhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcc
Confidence            34456788999986      3334 6788999999999999999999999999999999999999988877787776554


Q ss_pred             chhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhh
Q 047291          118 AADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTV  197 (511)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~  197 (511)
                      .......+..+.+++.+|+.|+++|+. +.+.|+.+.++.+.+.+.+.++.+++.+.+  .+++++|+.+++..++++++
T Consensus        97 ~~~~~~~~~~~l~~~~~g~~w~~~Rr~-~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi  173 (496)
T 3qz1_A           97 SYKLVSQRCQDISLGDYSLLWKAHKKL-TRSALLLGTRSSMEPWVDQLTQEFCERMRV--QAGAPVTIQKEFSLLTCSII  173 (496)
T ss_dssp             TTTTSCTTCCCSSSSCCSHHHHHHHHH-HHHHHHC--CCCHHHHHHHHHHHHHHHHHT--TCSCCCHHHHHHTHHHHHHT
T ss_pred             hHHHhcCCCCceEECCCCHHHHHHHHH-HHHHHhhccHhhHHHHHHHHHHHHHHHHHh--cCCCccCHHHHHHHHHHHHH
Confidence            433332222244444449999999999 577888777788999999999999999976  34678999999999999999


Q ss_pred             hhhhccccccchhhHHHHHHHHHHhccc-----cccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 047291          198 GRCVFGKKANEESKFGTISRRLTTQLQA-----FSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERP  272 (511)
Q Consensus       198 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (511)
                      +.++||.  .+++...............     ..+.+.+|++.++..  +..+...+..+.+.+++.+.++++++... 
T Consensus       174 ~~~~fG~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  248 (496)
T 3qz1_A          174 CYLTFGN--KEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN--PGLWRLKQAIENRDHMVEKQLRRHKESMV-  248 (496)
T ss_dssp             TTTSTTC--CCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHSCC-
T ss_pred             HHHhcCC--CCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence            9999999  2233333333333322221     123345565544421  23445677888899999999998887542 


Q ss_pred             CCccccccHHHHHHHhccccc--c-ccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcC
Q 047291          273 DDKSVAKDFVDILLQVQKDAT--T-KHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGK  349 (511)
Q Consensus       273 ~~~~~~~~~~~~ll~~~~~~~--~-~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  349 (511)
                        .....|+++.+++...+..  . ...++++++.+++..+++||+|||+++++|++++|++||++|+||++||++++++
T Consensus       249 --~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  326 (496)
T 3qz1_A          249 --AGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGP  326 (496)
T ss_dssp             --SSCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCS
T ss_pred             --CCCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence              2345789999998754331  1 1269999999999999999999999999999999999999999999999999986


Q ss_pred             ----CCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCC
Q 047291          350 ----KLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIP  425 (511)
Q Consensus       350 ----~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p  425 (511)
                          ++.+ .+++++||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+|
T Consensus       327 ~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P  405 (496)
T 3qz1_A          327 GASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRP  405 (496)
T ss_dssp             SSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCC
T ss_pred             CcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCc
Confidence                4556 89999999999999999999999998778999999999999999999999999999999999999999999


Q ss_pred             CCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccc--cCceecccCcee
Q 047291          426 ERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTET--FGLTVFKKIPLY  503 (511)
Q Consensus       426 ~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  503 (511)
                      |||++++     ....++|||+|+|.|+|++||.+|++++++.|+++|+++++++..  ..++...  .+++..|+ ++.
T Consensus       406 eR~l~~~-----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~  477 (496)
T 3qz1_A          406 DRFLEPG-----ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGA--LPSLQPDPYCGVNLKVQ-PFQ  477 (496)
T ss_dssp             CCCC--------CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCC--CCCSCCSCCCSSCCCCC-CCC
T ss_pred             ccccCCC-----CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCC--CCCCCcccCcceEecCC-ceE
Confidence            9999764     123789999999999999999999999999999999999875432  1223332  45555554 899


Q ss_pred             EEeeccCC
Q 047291          504 LVPVMYSA  511 (511)
Q Consensus       504 ~~~~~r~~  511 (511)
                      +++++|++
T Consensus       478 v~~~~R~~  485 (496)
T 3qz1_A          478 VRLQPRGV  485 (496)
T ss_dssp             CCCCCC--
T ss_pred             EEEEEecc
Confidence            99999973


No 11 
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=3e-74  Score=568.64  Aligned_cols=455  Identities=24%  Similarity=0.364  Sum_probs=360.3

Q ss_pred             CCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccch
Q 047291           41 GGNHNLPPCPPKLPIIGNLHQL-GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAA  119 (511)
Q Consensus        41 ~~~~~~~pgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~  119 (511)
                      +++.+.||||+++|++||++.+ ..+++..+.+|++|||+||++++++.++++|+||+++++|+.++...|++++.....
T Consensus         6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~   85 (476)
T 3e6i_A            6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF   85 (476)
T ss_dssp             ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred             cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence            3456789999999999999998 567889999999999999999999999999999999999999877777776654444


Q ss_pred             hhhccCCceeEecCCchhHHHHHHHhhhccCChhHH--hhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhh
Q 047291          120 DIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRV--QYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTV  197 (511)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~  197 (511)
                      .... ++  .++..+|+.|+++|+. ..+.++...+  +.+.+.+.+.++.+++.+.+.  +++++|+.+++..++++++
T Consensus        86 ~~~~-~~--~l~~~~g~~w~~~Rr~-~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~dvi  159 (476)
T 3e6i_A           86 HAHR-DR--GIIFNNGPTWKDIRRF-SLTTLRNYGMGKQGNESRIQREAHFLLEALRKT--QGQPFDPTFLIGCAPCNVI  159 (476)
T ss_dssp             GGGT-TS--SSTTCCSTTHHHHHHH-HHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHTHHHHHHH
T ss_pred             heec-CC--CEEecCCcHHHHHHHH-HHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHh--CCCCcChHHHHHHHHHHHH
Confidence            3332 22  4555679999999997 4555543322  346788899999999998763  4578999999999999999


Q ss_pred             hhhhccccccch-hhHHHHHHHHHHhcccc-----ccccccc-cchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047291          198 GRCVFGKKANEE-SKFGTISRRLTTQLQAF-----SFGDVFP-ALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLE  270 (511)
Q Consensus       198 ~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  270 (511)
                      +.++||.+++.. +++......+.......     .+...+| ++.+   +++..+...+..+.+.+++.+.++++++..
T Consensus       160 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---lp~~~~~~~~~~~~~~~~~~~~i~~~~~~~  236 (476)
T 3e6i_A          160 ADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHY---LPGSHRKVIKNVAEVKEYVSERVKEHHQSL  236 (476)
T ss_dssp             HHHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTT---SCSHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH---cCcHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999998743 33333333333222111     1223334 2222   233445567778889999999999888654


Q ss_pred             CCCCccccccHHHHHHHhccccc--cccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhc
Q 047291          271 RPDDKSVAKDFVDILLQVQKDAT--TKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVG  348 (511)
Q Consensus       271 ~~~~~~~~~~~~~~ll~~~~~~~--~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  348 (511)
                      ..   ....|+++.++....+..  .+..++++++.++++.+++||+|||+++++|++++|++||++|+||++||+++++
T Consensus       237 ~~---~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  313 (476)
T 3e6i_A          237 DP---NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIG  313 (476)
T ss_dssp             CT---TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred             CC---CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcC
Confidence            22   235689999987644321  2346899999999999999999999999999999999999999999999999998


Q ss_pred             CCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCc
Q 047291          349 KKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERF  428 (511)
Q Consensus       349 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~  428 (511)
                      +++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||
T Consensus       314 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~  393 (476)
T 3e6i_A          314 PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHF  393 (476)
T ss_dssp             TTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGG
T ss_pred             CCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhh
Confidence            88889999999999999999999999999998778999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccc-cCceecccCceeEEee
Q 047291          429 YNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTET-FGLTVFKKIPLYLVPV  507 (511)
Q Consensus       429 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  507 (511)
                      ++++... ..+..++|||+|+|.|+|++||.+|++++++.|+++|+|++..+.  ..++.... .+++.. +.++.++++
T Consensus       394 l~~~~~~-~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~-p~~~~~~~~  469 (476)
T 3e6i_A          394 LNENGKF-KYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDP--KDIDLSPIHIGFGCI-PPRYKLCVI  469 (476)
T ss_dssp             BCTTSSB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCT--TTCCCSCSEESSSEE-CCCCCEEEE
T ss_pred             cCCCCCc-cCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCC--CCCCCCcccCccccC-CCCeEEEEE
Confidence            9765432 245689999999999999999999999999999999999975432  22334332 444433 357888888


Q ss_pred             ccCC
Q 047291          508 MYSA  511 (511)
Q Consensus       508 ~r~~  511 (511)
                      +|+.
T Consensus       470 ~R~~  473 (476)
T 3e6i_A          470 PRSH  473 (476)
T ss_dssp             ECC-
T ss_pred             eccc
Confidence            8863


No 12 
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=1.2e-75  Score=574.89  Aligned_cols=441  Identities=19%  Similarity=0.322  Sum_probs=357.6

Q ss_pred             CCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhh
Q 047291           44 HNLPPCPPK-LPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIF  122 (511)
Q Consensus        44 ~~~~pgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~  122 (511)
                      .+.||+|++ +|+|||++.+.++++.++.++++|||+||++++++.++|+|+||+++++|+.++...+..++........
T Consensus        10 ~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~   89 (461)
T 3ld6_A           10 VKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTP   89 (461)
T ss_dssp             CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHH
T ss_pred             CCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhc
Confidence            446788765 9999999999889999999999999999999999999999999999999998877666655433332222


Q ss_pred             ccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhc
Q 047291          123 LYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVF  202 (511)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  202 (511)
                      .. +.+.+++.+++.|+++|+. +.+.|+...++.+.+.+.+.++++++.+.+    +..+|+.+++..+++++++.++|
T Consensus        90 ~~-g~~~~~~~~~~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~f  163 (461)
T 3ld6_A           90 VF-GKGVAYDVPNPVFLEQKKM-LKSGLNIAHFKQHVSIIEKETKEYFESWGE----SGEKNVFEALSELIILTASHCLH  163 (461)
T ss_dssp             HH-CTTSGGGSCHHHHHHHHHH-HHHHSSHHHHHHHHHHHHHHHHHHGGGGCS----EEEEEHHHHHHHHHHHHHHHHHT
T ss_pred             cC-CCccccCCCcHHHHHHHHh-ccccccHHHHhhhhHHHHHHHHHHHHHHhh----cCCccHHHHHHHHHHHHHHHHHc
Confidence            22 3456677789999999999 688999999999999999999888877643    46789999999999999999999


Q ss_pred             cccccc--hhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 047291          203 GKKANE--ESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKD  280 (511)
Q Consensus       203 G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  280 (511)
                      |.+++.  .+.+......+......  ....+|.+...    ....+..++.+.+.+++.+.+++++..     .+..+|
T Consensus       164 G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~i~~r~~~-----~~~~~d  232 (461)
T 3ld6_A          164 GKEIRSQLNEKVAQLYADLDGGFSH--AAWLLPGWLPL----PSFRRRDRAHREIKDIFYKAIQKRRQS-----QEKIDD  232 (461)
T ss_dssp             CHHHHHTCCHHHHHHHHHHHTTSSH--HHHHSCTTSCC----HHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCCCS
T ss_pred             Ccchhhhhhhhhhhhhhhhhhhhhh--HHHhhhhhccC----cHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCCcc
Confidence            988753  23333333333322211  11112221111    123445677788888899988887754     344578


Q ss_pred             HHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCC-cCCccccc
Q 047291          281 FVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKL-KVEASDIN  359 (511)
Q Consensus       281 ~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~-~~~~~~l~  359 (511)
                      +++.|+++..+++  ..++++++++++..+++||+|||+++++|++++|++||++|++||+|++++++++. .++.++++
T Consensus       233 ~l~~ll~~~~~~~--~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~l~  310 (461)
T 3ld6_A          233 ILQTLLDATYKDG--RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLK  310 (461)
T ss_dssp             HHHHHHTCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHH
T ss_pred             hhhhhHHhhhccc--CCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhHHHHH
Confidence            9999998765543  46999999999999999999999999999999999999999999999999998754 46788999


Q ss_pred             CchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 047291          360 QMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGED  439 (511)
Q Consensus       360 ~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~  439 (511)
                      +||||+|||+|+||++|+++... |.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++++... ..+
T Consensus       311 ~lpyl~avi~E~lRl~p~~~~~~-r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~-~~~  388 (461)
T 3ld6_A          311 DLNLLDRCIKETLRLRPPIMIMM-RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPAS-GEK  388 (461)
T ss_dssp             TCHHHHHHHHHHHHHSCSCCCEE-EEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHH-HSS
T ss_pred             HHhhhhheeeeccccCCchhccc-cccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCccc-CCC
Confidence            99999999999999999998875 9999999999999999999999999999999999999999999999875432 245


Q ss_pred             cceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          440 FHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       440 ~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ..|+|||+|+|.|+|++||++|++++++.||++|||+++++..+   ... ..+. ..++.++.|++++|+
T Consensus       389 ~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~---~~~-~~~~-~~~p~~~~v~~~~Rs  454 (461)
T 3ld6_A          389 FAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFP---TVN-YTTM-IHTPENPVIRYKRRS  454 (461)
T ss_dssp             SSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCC---CBC-CSSS-SCCBSSCEEEEEECC
T ss_pred             CccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCC---ccc-ccce-EEcCCceEEEEEECC
Confidence            67999999999999999999999999999999999999876431   122 2233 345567889999996


No 13 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=3.4e-74  Score=567.45  Aligned_cols=454  Identities=25%  Similarity=0.372  Sum_probs=350.6

Q ss_pred             CCCCCCCCCCCCcccccccC-CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhh
Q 047291           43 NHNLPPCPPKLPIIGNLHQL-GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADI  121 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~  121 (511)
                      +.+.||||+++|++|+++.+ ..+++..+.+++++||+||++++++.+.++|+||+++++|+.++...|.+++.......
T Consensus         9 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~   88 (477)
T 1r9o_A            9 RGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAER   88 (477)
T ss_dssp             CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCT
T ss_pred             CCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhh
Confidence            34579999999999999887 45678899999999999999999988999999999999999766666665543222222


Q ss_pred             hccCCceeEecCCchhHHHHHHHhhhccCChh--HHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhh
Q 047291          122 FLYGCIDIAFSPYGEYWREIRRIGVHELLSPQ--RVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGR  199 (511)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~  199 (511)
                      .. ++.+ ++..+|+.|+++|+. ..+.|++.  .++.+.+.+.+.++.+++.+.+.  .++++|+.+++..+++++++.
T Consensus        89 ~~-~~~~-l~~~~g~~w~~~Rr~-~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~  163 (477)
T 1r9o_A           89 AN-RGFG-IVFSNGKKWKEIRRF-SLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT--KASPCDPTFILGCAPCNVICS  163 (477)
T ss_dssp             TT-CTTS-STTCCHHHHHHHHHH-HHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHHHHHHHHHHH
T ss_pred             cc-CCCc-eEecCChHHHHHHHH-HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHH
Confidence            11 2233 445579999999998 56677765  44678999999999999999763  346899999999999999999


Q ss_pred             hhccccccch-hhHHHHHHHHHHhc---cc--cccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047291          200 CVFGKKANEE-SKFGTISRRLTTQL---QA--FSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPD  273 (511)
Q Consensus       200 ~~fG~~~~~~-~~~~~~~~~~~~~~---~~--~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  273 (511)
                      ++||.+++.. +++......+....   ..  ..+...+|++.+  .++...++..++.+.+.+++.+.++++++...  
T Consensus       164 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~--~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--  239 (477)
T 1r9o_A          164 IIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIID--YFPGTHNKLLKNVAFMKSYILEKVKEHQESMD--  239 (477)
T ss_dssp             HHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCS--CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--
T ss_pred             HHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHH--hcchHHHHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence            9999987633 23444433332222   11  112334554211  12222345667788889999999998876432  


Q ss_pred             CccccccHHHHHHHhcccc--ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCC
Q 047291          274 DKSVAKDFVDILLQVQKDA--TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKL  351 (511)
Q Consensus       274 ~~~~~~~~~~~ll~~~~~~--~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  351 (511)
                       .....|+++.++....+.  .....++++++++++..+++||+|||+++++|++++|++||++|+||++||++++++++
T Consensus       240 -~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  318 (477)
T 1r9o_A          240 -MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR  318 (477)
T ss_dssp             -TTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS
T ss_pred             -CCCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCC
Confidence             123468999998653321  11246999999999999999999999999999999999999999999999999998777


Q ss_pred             cCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCC
Q 047291          352 KVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNN  431 (511)
Q Consensus       352 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  431 (511)
                      .++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++.
T Consensus       319 ~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~  398 (477)
T 1r9o_A          319 SPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE  398 (477)
T ss_dssp             CCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCT
T ss_pred             CCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECC
Confidence            78999999999999999999999999997677999999999999999999999999999999999999999999999975


Q ss_pred             CCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCcc-ccCceecccCceeEEeeccC
Q 047291          432 PVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTE-TFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       432 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~  510 (511)
                      +.... .+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++..  .+.... ..+++..| .++.+++++|+
T Consensus       399 ~~~~~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~~~~~~R~  474 (477)
T 1r9o_A          399 GGNFK-KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPK--NLDTTPVVNGFASVP-PFYQLCFIPIH  474 (477)
T ss_dssp             TSCBC-CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG--GCCCCCBCCSSSCBC-CCCCEEEEECC
T ss_pred             CCCcC-ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCC--CCCccCCcCceeecC-CCeEEEEEEec
Confidence            43322 356899999999999999999999999999999999999876532  112222 34555555 67888888875


No 14 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=4.7e-74  Score=566.13  Aligned_cols=455  Identities=24%  Similarity=0.410  Sum_probs=357.6

Q ss_pred             CCCCCCCCCCCCCcccccccCCCC---CcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc
Q 047291           42 GNHNLPPCPPKLPIIGNLHQLGNL---PHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA  118 (511)
Q Consensus        42 ~~~~~~pgp~~~p~iG~~~~~~~~---~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~  118 (511)
                      ++.+.||||+++|++|+++.+...   ++..+.+++++||+|+++++++.++++|+||+++++|+.++...|++++....
T Consensus         9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~   88 (481)
T 3czh_A            9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL   88 (481)
T ss_dssp             ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred             CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence            445689999999999999877433   78899999999999999999998999999999999999877666776654333


Q ss_pred             hhhhccCCceeEecCCchhHHHHHHHhhhccCChhHH--hhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHh
Q 047291          119 ADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRV--QYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDT  196 (511)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~  196 (511)
                      ..... ++.+.+++.+|+.|+++|+. +.+.|++..+  +.+.+.+.+.++.+++.+.+.  +++++|+.+++..+++++
T Consensus        89 ~~~~~-~~~~~~~~~~g~~w~~~R~~-~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~v  164 (481)
T 3czh_A           89 FMKMT-KMGGLLNSRYGRGWVDHRRL-AVNSFRYFGYGQKSFESKILEETKFFNDAIETY--KGRPFDFKQLITNAVSNI  164 (481)
T ss_dssp             HHHHH-TTCSSTTCCSSHHHHHHHHH-HHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT--TTCCBCCHHHHHHHHHHH
T ss_pred             HHhhc-CCCCeEeCCCChHHHHHHHH-HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc--CCCCcCHHHHHHHHHHHH
Confidence            32222 22234556789999999999 5777775543  578999999999999999763  356799999999999999


Q ss_pred             hhhhhccccccc-hhhHHHHHHHHHHhc---cccc--cccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047291          197 VGRCVFGKKANE-ESKFGTISRRLTTQL---QAFS--FGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLE  270 (511)
Q Consensus       197 ~~~~~fG~~~~~-~~~~~~~~~~~~~~~---~~~~--~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  270 (511)
                      ++.++||.+++. ++++...........   ....  +...+|++.++..  ...+...++.+.+.+++.+.++++++..
T Consensus       165 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~  242 (481)
T 3czh_A          165 TNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPF--GKHQQLFRNAAVVYDFLSRLIEKASVNR  242 (481)
T ss_dssp             HHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS--SHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999998863 233333332222221   1111  3344665543321  2344566778888999999999887643


Q ss_pred             CCCCccccccHHHHHHHhccccc--cccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhc
Q 047291          271 RPDDKSVAKDFVDILLQVQKDAT--TKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVG  348 (511)
Q Consensus       271 ~~~~~~~~~~~~~~ll~~~~~~~--~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  348 (511)
                      .   .....|+++.|+++..+..  ....++++++++++..+++||+|||+++++|++++|++||++|+||++||+++++
T Consensus       243 ~---~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  319 (481)
T 3czh_A          243 K---PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG  319 (481)
T ss_dssp             C---TTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred             C---CCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcC
Confidence            2   1235689999997643311  1236999999999999999999999999999999999999999999999999998


Q ss_pred             CCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCc
Q 047291          349 KKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERF  428 (511)
Q Consensus       349 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~  428 (511)
                      .++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++|+||++|+||++||||||
T Consensus       320 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~  399 (481)
T 3czh_A          320 PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERF  399 (481)
T ss_dssp             SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGG
T ss_pred             CCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCce
Confidence            87789999999999999999999999999997777999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeec
Q 047291          429 YNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVM  508 (511)
Q Consensus       429 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (511)
                      ++.+.. ...+..++|||+|+|.|+|++||.+|++++++.|+++|+++++++..   .+.....+++.. +.+..+++++
T Consensus       400 l~~~~~-~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~-p~~~~~~~~~  474 (481)
T 3czh_A          400 LDSSGY-FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELV---PDLKPRLGMTLQ-PQPYLICAER  474 (481)
T ss_dssp             BCTTSC-BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCC---CCCCCCSSSSCC-CCCCCBEEEE
T ss_pred             eCCCCC-CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCC---CCcccCCCceec-CCceEEEEEe
Confidence            975432 13567899999999999999999999999999999999999865432   222223354433 3355666666


Q ss_pred             cC
Q 047291          509 YS  510 (511)
Q Consensus       509 r~  510 (511)
                      |+
T Consensus       475 ~~  476 (481)
T 3czh_A          475 RH  476 (481)
T ss_dssp             CC
T ss_pred             cc
Confidence            64


No 15 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=1.3e-73  Score=557.17  Aligned_cols=436  Identities=20%  Similarity=0.269  Sum_probs=350.9

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchh
Q 047291           41 GGNHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAAD  120 (511)
Q Consensus        41 ~~~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~  120 (511)
                      .++.+.||||+++|++||++.+..+++ ++.+++++||+||+++++|.+.++|+||+++++|+.++...|..... ....
T Consensus         8 ~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~-~~~~   85 (444)
T 2ve3_A            8 LNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP-LSTR   85 (444)
T ss_dssp             -CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC-HHHH
T ss_pred             CCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh-HHHH
Confidence            446678999999999999988755677 88899999999999998888899999999999999876554542211 1111


Q ss_pred             hhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhh
Q 047291          121 IFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRC  200 (511)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~  200 (511)
                      .. .+ ...+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+..    ++++|+.++++.+++++++.+
T Consensus        86 ~~-~g-~~~l~~~~g~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~vi~~~  158 (444)
T 2ve3_A           86 IL-LG-PNALATQMGEIHRSRRKI-LYQAFLPRTLDSYLPKMDGIVQGYLEQWGK----ANEVIWYPQLRRMTFDVAATL  158 (444)
T ss_dssp             HH-HC-TTSGGGCCHHHHHHHHHH-HHGGGCHHHHHTTHHHHHHHHHHHHHHHHH----SSEEEHHHHHHHHHHHHHHHH
T ss_pred             HH-hC-ccccccCCchHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHHHHHhcC----CCcEeHHHHHHHHHHHHHHHH
Confidence            11 12 223445679999999999 588999999999999999999999999853    568999999999999999999


Q ss_pred             hccccccch-hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 047291          201 VFGKKANEE-SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAK  279 (511)
Q Consensus       201 ~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  279 (511)
                      +|| +.... +++...+..+......  +...+|..        ..++..++.+.+.+++.+.++++++.     .....
T Consensus       159 ~fG-~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~~  222 (444)
T 2ve3_A          159 FMG-EKVSQNPQLFPWFETYIQGLFS--LPIPLPNT--------LFGKSQRARALLLAELEKIIKARQQQ-----PPSEE  222 (444)
T ss_dssp             HTC-HHHHSCTTHHHHHHHHHHHHSS--CCCCSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHTS-----CCCCS
T ss_pred             HcC-CCcccHHHHHHHHHHHHHHHhc--CCccCCCc--------HHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCcc
Confidence            999 33211 3344443333322211  11112211        12345567778889999999988754     23457


Q ss_pred             cHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCccccc
Q 047291          280 DFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDIN  359 (511)
Q Consensus       280 ~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~  359 (511)
                      |+++.|+++..+++  ..+++++++++++.+++||+|||+++++|++++|++||++|++||+|++.+++++ .++.++++
T Consensus       223 d~l~~ll~~~~~~~--~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~l~  299 (444)
T 2ve3_A          223 DALGILLAARDDNN--QPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETLK  299 (444)
T ss_dssp             SHHHHHHHCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCHHHHT
T ss_pred             CHHHHHHhccccCC--CCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CCChhhhh
Confidence            99999998754322  3699999999999999999999999999999999999999999999999998755 68999999


Q ss_pred             CchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 047291          360 QMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGED  439 (511)
Q Consensus       360 ~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~  439 (511)
                      +||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+++|+||++|+||++||||||++.+......+
T Consensus       300 ~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~  378 (444)
T 2ve3_A          300 KMPYLDQVLQEVLRLIPPVGGG-FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPP  378 (444)
T ss_dssp             TCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCT
T ss_pred             cChHHHHHHHHHHhcCCCccCc-cceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCCC
Confidence            9999999999999999999975 599999999999999999999999999999999999999999999997543222345


Q ss_pred             cceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          440 FHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       440 ~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ..++|||+|+|.|+|++||.+|++++++.|+++|++++.++..   .++  ..+.+..++.++.|++++|.
T Consensus       379 ~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~--~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          379 FAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQN---LEL--VVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             TSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCC---CCE--EESSSEEETTCCEEEEEEC-
T ss_pred             ceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCC---cce--eccccccCCCCceEEEEeCC
Confidence            6799999999999999999999999999999999999875532   222  33456788899999999884


No 16 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=1.9e-73  Score=564.32  Aligned_cols=453  Identities=21%  Similarity=0.247  Sum_probs=349.3

Q ss_pred             hCCCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCC
Q 047291           40 KGGNHNLPPCPPKLPIIGNLHQL-----GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRP  114 (511)
Q Consensus        40 ~~~~~~~~pgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~  114 (511)
                      +.++++.+|||++.|+. +++.+     ..+++..+.++++|||+||++++|+.+.|+|+||+++++|+.+++ .|++++
T Consensus         4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~   81 (487)
T 3n9y_A            4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERF   81 (487)
T ss_dssp             CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCC
T ss_pred             CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCC
Confidence            34577889999988875 65554     135678899999999999999999999999999999999997653 566665


Q ss_pred             Cccchh--hhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhc----cCCCceeHHHH
Q 047291          115 KTTAAD--IFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRAS----LKGASVNLSEM  188 (511)
Q Consensus       115 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~----~~~~~vdl~~~  188 (511)
                      ......  ....++..++++.+|+.|+++|+.+.+.+|+++.++.+.+.+.+.++++++.+.+..    +++.++|+.++
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~  161 (487)
T 3n9y_A           82 LIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD  161 (487)
T ss_dssp             CCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHH
T ss_pred             CCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHH
Confidence            433211  111122345667789999999999544469999999999999999999999997642    23457999999


Q ss_pred             HHHHHHHhhhhhhccccccc-----hhhHHHHHHHHHHhcccccccccccc--chhhhhccCchHHHHHHHHHHHHHHHH
Q 047291          189 LLTVTNDTVGRCVFGKKANE-----ESKFGTISRRLTTQLQAFSFGDVFPA--LGWMDHLTGLIPCVKATFRSLDAFFDD  261 (511)
Q Consensus       189 ~~~~~~~~~~~~~fG~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~l~~~~~~~~~~~~~~~~~~~~~~~  261 (511)
                      +..+++++++.++||.+++.     .......................+|.  +.++.  ....+...+..+.+.+++.+
T Consensus       162 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~--~~~~~~~~~~~~~~~~~~~~  239 (487)
T 3n9y_A          162 LFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFR--TKTWKDHVAAWDVIFSKADI  239 (487)
T ss_dssp             HHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHC--HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcc--cHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999852     11222222222222211112222332  11211  01122333444455555666


Q ss_pred             HHHHHHhccC--CCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHH
Q 047291          262 VIAEHRNLER--PDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKA  339 (511)
Q Consensus       262 ~i~~~~~~~~--~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  339 (511)
                      .++++.+..+  ........|+++.+++.       ..++++++.+++..+++||+|||+++++|++++|++||++|+||
T Consensus       240 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl  312 (487)
T 3n9y_A          240 YTQNFYWELRQKGSVHHDYRGILYRLLGD-------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDML  312 (487)
T ss_dssp             HHHHHHHHHHHHCCCCSSCCCHHHHHHHS-------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccchHHHHHHHHhc-------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHH
Confidence            6655433211  11123457899999863       25899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCC
Q 047291          340 QEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDN  419 (511)
Q Consensus       340 r~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~  419 (511)
                      ++||++++++++.++.+++++||||+|||+|+||++|+++. .+|.+.+|++++||.|||||.|+++.+++|+||++|+|
T Consensus       313 ~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~d  391 (487)
T 3n9y_A          313 RAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFD  391 (487)
T ss_dssp             HHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSS
T ss_pred             HHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCC
Confidence            99999999877667789999999999999999999999986 57999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceeccc
Q 047291          420 PEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKK  499 (511)
Q Consensus       420 p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (511)
                      |++|+||||++++..  ..+..++|||+|+|.|+|++||++|++++++.|+++|+|++.++.     ++....+.++.|+
T Consensus       392 p~~F~PeR~l~~~~~--~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-----~~~~~~~~~~~p~  464 (487)
T 3n9y_A          392 PENFDPTRWLSKDKN--ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS-----DVGTTFNLILMPE  464 (487)
T ss_dssp             TTSCCGGGGTCSCTT--SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC-----CCCEEESSSEEES
T ss_pred             cccCChhhcCCCCCC--CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc-----ccccceeeeecCC
Confidence            999999999975432  245689999999999999999999999999999999999987652     2334456778899


Q ss_pred             CceeEEeeccCC
Q 047291          500 IPLYLVPVMYSA  511 (511)
Q Consensus       500 ~~~~~~~~~r~~  511 (511)
                      .++.+++++|+.
T Consensus       465 ~~~~~~~~~r~~  476 (487)
T 3n9y_A          465 KPISFTFWPFNQ  476 (487)
T ss_dssp             SCCCEEEEEC--
T ss_pred             CCceeEEEECCc
Confidence            999999999863


No 17 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=5.6e-72  Score=547.34  Aligned_cols=441  Identities=18%  Similarity=0.297  Sum_probs=335.7

Q ss_pred             CCCCC-CCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhc
Q 047291           45 NLPPC-PPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFL  123 (511)
Q Consensus        45 ~~~pg-p~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~  123 (511)
                      +.||| |.++|++||+..+..+++.++.+++++||+||++++++.++++|+||+++++|+.++...|+.++........ 
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~-   82 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPI-   82 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHH-
T ss_pred             CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhh-
Confidence            56887 8889999999988888999999999999999999999989999999999999998765556655443222111 


Q ss_pred             cCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhcc
Q 047291          124 YGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFG  203 (511)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG  203 (511)
                      .+ .+ ++ .+++.|+++|+. +.+.|+++.++.+.+.+.+.++.+++.+..    ++.+|+.+++..+++++++.++||
T Consensus        83 ~g-~~-~~-~~~~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~~~~----~~~vd~~~~~~~~~~~vi~~~~fG  154 (455)
T 2cib_A           83 FG-EG-VV-FDASPERRKEML-HNAALRGEQMKGHAATIEDQVRRMIADWGE----AGEIDLLDFFAELTIYTSSACLIG  154 (455)
T ss_dssp             HC------------------------CCHHHHHHHHHHHHHHHHHHHTTCCS----EEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             cC-Cc-cc-cCcHHHHHHHhh-hccccCHHHHHHHHHHHHHHHHHHHHHhCC----CCcEeHHHHHHHHHHHHHHHHHcC
Confidence            12 22 33 358999999999 588999999999999999999999987642    357999999999999999999999


Q ss_pred             ccccc--hhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccH
Q 047291          204 KKANE--ESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDF  281 (511)
Q Consensus       204 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  281 (511)
                      .+++.  ++++...+..+.....  .....+|++..     ...++..++.+.+.+++.+.++++++....  .....|+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--~~~~~dl  225 (455)
T 2cib_A          155 KKFRDQLDGRFAKLYHELERGTD--PLAYVDPYLPI-----ESFRRRDEARNGLVALVADIMNGRIANPPT--DKSDRDM  225 (455)
T ss_dssp             HHHHTTCCHHHHHHHHHHHTTCC--GGGGTCTTCSC-----HHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCH
T ss_pred             CCcchhhhHHHHHHHHHHHhhhh--HHHHhcccCCC-----hhHHHHHHHHHHHHHHHHHHHHHHHhcccC--CCCcccH
Confidence            98754  2345555544432211  11223342211     112345567778888999999988764311  1123499


Q ss_pred             HHHHHHhccccccccC-CChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccC
Q 047291          282 VDILLQVQKDATTKHE-LSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQ  360 (511)
Q Consensus       282 ~~~ll~~~~~~~~~~~-l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~  360 (511)
                      ++.|+++..+++  .. +++++++++++.+++||+|||+++++|++++|++||++|++|++||+++++++..++.+++++
T Consensus       226 l~~ll~~~~~~~--~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~  303 (455)
T 2cib_A          226 LDVLIAVKAETG--TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQ  303 (455)
T ss_dssp             HHHHHHCBCTTS--SBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSC
T ss_pred             HHHHHHhhhhcC--CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhc
Confidence            999998754322  24 899999999999999999999999999999999999999999999999998766788999999


Q ss_pred             chhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 047291          361 MEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDF  440 (511)
Q Consensus       361 lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~  440 (511)
                      ||||+|||+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++.+......+.
T Consensus       304 lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~  382 (455)
T 2cib_A          304 IPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRW  382 (455)
T ss_dssp             CHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTT
T ss_pred             CHHHHHHHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCc
Confidence            99999999999999999986 46999999999999999999999999999999999999999999999975422111256


Q ss_pred             ceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCc-cccCceecccCceeEEeeccC
Q 047291          441 HYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMT-ETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       441 ~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      .++|||+|+|.|+|++||.+|++++++.|+++|++++..+.    .++. ...+.+..|+.++.|++++|.
T Consensus       383 ~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~~~~~~~~~~p~~~~~v~~~~R~  449 (455)
T 2cib_A          383 TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPP----ESYRNDHSKMVVQLAQPAAVRYRRRT  449 (455)
T ss_dssp             TCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCG----GGCCEECSSSSCEECSCCEEEEEEC-
T ss_pred             cccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCc----cccccccccccccCCCCceEEEEECc
Confidence            79999999999999999999999999999999999986321    1221 113445567778999988885


No 18 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=5.2e-72  Score=548.79  Aligned_cols=439  Identities=19%  Similarity=0.316  Sum_probs=356.8

Q ss_pred             CCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhC-CcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhh
Q 047291           44 HNLPPCPPK-LPIIGNLHQLGNLPHRSLRALSKKYG-PLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADI  121 (511)
Q Consensus        44 ~~~~pgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~  121 (511)
                      .+.||||++ +|++||++.+..+++.++.++++||| +||++++++.++++|+||+++++++.++...+..++.......
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~   81 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP   81 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred             CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence            467898654 99999999887889999999999999 9999999999999999999999999887777766654433322


Q ss_pred             hccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHH-HHHHhccCCCceeHHHHHHHHHHHhhhhh
Q 047291          122 FLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMIN-KLRRASLKGASVNLSEMLLTVTNDTVGRC  200 (511)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~l~~~~~~~~~vdl~~~~~~~~~~~~~~~  200 (511)
                      ..  +.+.+++.+++.|+++|+. +.+.|+++.++.+.+.+.++++++++ .+.+   +++.+|+.+++..+++++++.+
T Consensus        82 ~~--g~~~~~~~~~~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i~~~  155 (450)
T 3gw9_A           82 VF--GEGVAYAAPYPRMREQLNF-LAEELTIAKFQNFVPAIQHEVRKFMAANWDK---DEGEINLLEDCSTMIINTACQC  155 (450)
T ss_dssp             HH--CTTSGGGSCHHHHHHHHHH-HHHTTSGGGCTTHHHHHHHHHHHHHHHHSCS---SEEEEEHHHHHHHHHHHHHHHH
T ss_pred             Hh--cCCcccCCCcHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHHHHHHH
Confidence            22  2344555679999999999 68899999999999999999999988 5432   3467999999999999999999


Q ss_pred             hccccccch---hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 047291          201 VFGKKANEE---SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSV  277 (511)
Q Consensus       201 ~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  277 (511)
                      +||.+++..   ..+...+..+....  ......+|++.++..  ...++..++.+.+.+++.+.++++++..... ...
T Consensus       156 ~fG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-~~~  230 (450)
T 3gw9_A          156 LFGEDLRKRLDARRFAQLLAKMESSL--IPAAVFLPILLKLPL--PQSARCHEARTELQKILSEIIIARKEEEVNK-DSS  230 (450)
T ss_dssp             HSCHHHHHHSCHHHHHHHHHHHHHTC--CGGGGTCGGGGGSCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SCC
T ss_pred             HcCcchhhhhhhHHHHHHHHHHHhcc--ccchhcccchhccCC--chhHHHHHHHHHHHHHHHHHHHHHHHhhccc-CCc
Confidence            999987642   34444444443222  223345666554421  2234566778889999999998887542111 245


Q ss_pred             cccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHh--cCchHHHHHHHHHHHHhcCCCcCCc
Q 047291          278 AKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELV--KHPSTMKKAQEEVRRVVGKKLKVEA  355 (511)
Q Consensus       278 ~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~~~~~lr~Ei~~~~~~~~~~~~  355 (511)
                      ..|+++.++++..+++  ..++++++.++++.+++||+|||+.+++|++++|+  .||++|+++++||+++   ++.++.
T Consensus       231 ~~d~l~~ll~~~~~~~--~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~~~~~  305 (450)
T 3gw9_A          231 TSDLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNY  305 (450)
T ss_dssp             CCSHHHHHHHCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CSSCCH
T ss_pred             cchHHHHHHHhhccCC--CCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---cCCCCh
Confidence            6799999998754432  36999999999999999999999999999999999  9999999999999987   445788


Q ss_pred             ccc-cCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCC
Q 047291          356 SDI-NQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVN  434 (511)
Q Consensus       356 ~~l-~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~  434 (511)
                      +++ ++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|||+..    
T Consensus       306 ~~~~~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~~----  380 (450)
T 3gw9_A          306 NNVMDEMPFAERCARESIRRDPPLLML-MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK----  380 (450)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCS----
T ss_pred             HHHHHhcHHHHHHHHHHHHhCCchhcc-ccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCcC----
Confidence            888 99999999999999999999875 599999999999999999999999999999999999999999999321    


Q ss_pred             CCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceeccc-CceeEEeeccC
Q 047291          435 FMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKK-IPLYLVPVMYS  510 (511)
Q Consensus       435 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~  510 (511)
                         .+..++|||+|+|.|+|++||.+|++++++.|+++|||+++++..+ ...+   .+.+..|+ .++.|++++|.
T Consensus       381 ---~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~---~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          381 ---VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVP-DPDY---HTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             ---STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCC-CEET---TSSSCEECGGGCEEEEEECC
T ss_pred             ---CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCC-CCcc---ccceecCCCCceEeEeeecC
Confidence               2467999999999999999999999999999999999998754321 1112   23455676 89999999984


No 19 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=6.1e-71  Score=541.57  Aligned_cols=426  Identities=20%  Similarity=0.336  Sum_probs=340.3

Q ss_pred             CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc-hh-hhc--cCCceeEecCCchhH
Q 047291           63 GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA-AD-IFL--YGCIDIAFSPYGEYW  138 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~~~~~~~~~~  138 (511)
                      +..++..+.+|++|||+||++++++.+.|+|+||+++++|+.++  .+...+.... .. .+.  ..+.+.+++.+|+.|
T Consensus         9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w   86 (456)
T 3mdm_A            9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERW   86 (456)
T ss_dssp             CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred             cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence            34578889999999999999999999999999999999999643  2333221111 00 000  112344455589999


Q ss_pred             HHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhccccccch----hhHHH
Q 047291          139 REIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGKKANEE----SKFGT  214 (511)
Q Consensus       139 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~----~~~~~  214 (511)
                      +++|+. +.+.|+++.++.+.+.+.+.++.+++.+.....++.++|+.+++..+++++++.++||.+++..    +.+..
T Consensus        87 ~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~  165 (456)
T 3mdm_A           87 HKQRRV-IDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQ  165 (456)
T ss_dssp             HHHHHH-HGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHH
T ss_pred             HHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHH
Confidence            999999 6889999999999999999999999999887666779999999999999999999999998632    23444


Q ss_pred             HHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccccc
Q 047291          215 ISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATT  294 (511)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  294 (511)
                      .+.........    ...|++.+++......+...+..+.+.+++.++++++++....+ .....|+++.++++..    
T Consensus       166 ~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-~~~~~d~l~~ll~~~~----  236 (456)
T 3mdm_A          166 AVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRG-EEVPADILTQILKAEE----  236 (456)
T ss_dssp             HHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCCHHHHHHHHTS----
T ss_pred             HHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchhhHHHHHHHhcC----
Confidence            43333322211    01122222211111223455666777888888888877543222 2345699999998642    


Q ss_pred             ccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCC
Q 047291          295 KHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRL  374 (511)
Q Consensus       295 ~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  374 (511)
                       ..++++++.+++..+++||+|||+++++|++++|++||++|+||++||++++++++.++.+++++||||+|||+|+||+
T Consensus       237 -~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl  315 (456)
T 3mdm_A          237 -GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRL  315 (456)
T ss_dssp             -SCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHh
Confidence             3588999999999999999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             CCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCC
Q 047291          375 HAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPG  454 (511)
Q Consensus       375 ~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G  454 (511)
                      +|+++... |.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||+++..   .....++|||+|+|.|+|
T Consensus       316 ~p~~~~~~-r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~---~~~~~~~pFg~G~r~C~G  391 (456)
T 3mdm_A          316 YPPAWGTF-RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP---KPRFTYFPFSLGHRSCIG  391 (456)
T ss_dssp             CCSSCCEE-EEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC---CCSSSCCTTCCGGGSCTT
T ss_pred             CCCccccc-cccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC---CCCCcccCCCCCCcCCCC
Confidence            99999764 99999999999999999999999999999999999999999999997642   245679999999999999


Q ss_pred             chHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          455 TLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       455 ~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ++||.+|++++++.|+++|++++.++..   .++  ....+..|+.++.+++++|+
T Consensus       392 ~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~--~~~~~~~p~~~~~~~~~~r~  442 (456)
T 3mdm_A          392 QQFAQMEVKVVMAKLLQRLEFRLVPGQR---FGL--QEQATLKPLDPVLCTLRPRG  442 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEECTTCC---CCE--EESSSEEESSCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHhCeEEeCCCCc---cee--ecceEEecCCCeEEEEEEcC
Confidence            9999999999999999999999876532   223  23456788899999998885


No 20 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=1.6e-70  Score=539.09  Aligned_cols=440  Identities=22%  Similarity=0.322  Sum_probs=344.6

Q ss_pred             CCCCCCCCCCcccccccCC-CCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhh-
Q 047291           45 NLPPCPPKLPIIGNLHQLG-NLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIF-  122 (511)
Q Consensus        45 ~~~pgp~~~p~iG~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~-  122 (511)
                      +.+|||+++|++||++.+. .+++..+.+++++||+||++++++.+.++|+||+++++|+.++  .|..... ...... 
T Consensus         3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~~   79 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFVR   79 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHHH
T ss_pred             CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHHH
Confidence            5689999999999998884 4678889999999999999999999999999999999999642  2432221 111111 


Q ss_pred             ccCCceeEec-CCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhh
Q 047291          123 LYGCIDIAFS-PYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCV  201 (511)
Q Consensus       123 ~~~~~~~~~~-~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~  201 (511)
                      ...+.+.+++ .+++.|+++|+. +.+.|++..++.+.+.+.+.++++++.+... .+++.+|+.+++..+++++++.++
T Consensus        80 ~~~~~~l~~~~~~g~~w~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~  157 (470)
T 2ij2_A           80 DFAGDGLFTSWTHEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCG  157 (470)
T ss_dssp             HHHTTSGGGSCTTSHHHHHHHHH-HGGGGSTTTHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCceEEcCCCchHHHHHHHH-hccccCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHHHHH
Confidence            1112233333 479999999999 5789999999999999999999999998753 235689999999999999999999


Q ss_pred             ccccccch-----hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 047291          202 FGKKANEE-----SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKS  276 (511)
Q Consensus       202 fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  276 (511)
                      ||.+++..     ..+...+............  ..|++.++..  ...+...+..+.+.+++.+.++++++.     ..
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~  228 (470)
T 2ij2_A          158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQ--RANPDDPAYD--ENKRQFQEDIKVMNDLVDKIIADRKAS-----GE  228 (470)
T ss_dssp             HSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC-----CTTSGGGH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-----CC
T ss_pred             cCCcccccccCCCCHHHHHHHHHHHHHHHHHh--hhhhHhhccc--hHHHHHHHHHHHHHHHHHHHHHHHHhc-----cc
Confidence            99987532     2343333332221111000  0122222211  123445667778888999999888754     22


Q ss_pred             ccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcc
Q 047291          277 VAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEAS  356 (511)
Q Consensus       277 ~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~  356 (511)
                      ...|+++.|+++..+. ....++++++.+++..+++||+|||+++++|++++|++||++|+||++||+++++++ .++.+
T Consensus       229 ~~~dll~~ll~~~~~~-~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~  306 (470)
T 2ij2_A          229 QSDDLLTHMLNGKDPE-TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYK  306 (470)
T ss_dssp             CCSSHHHHHHHCCCTT-TCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSS-SCCHH
T ss_pred             CchhHHHHHHhccCcc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC-CCCHH
Confidence            3468999999865322 123699999999999999999999999999999999999999999999999998764 58999


Q ss_pred             cccCchhHHHHHhhhcCCCCCCccccccccCCcceecC-eeeCCCcEEEeehHHhhcCCCCC-CCCCCCCCCCcCCCCCC
Q 047291          357 DINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGG-YEIPAKTRVFANAWAIQRDPKLW-DNPEEFIPERFYNNPVN  434 (511)
Q Consensus       357 ~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g-~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~  434 (511)
                      ++++||||+|||+|+||++|+++.. +|.+.+|++++| |.||||+.|+++.+++||||++| +||++|+|||| ++ . 
T Consensus       307 ~~~~lpyl~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~-~-  382 (470)
T 2ij2_A          307 QVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN-P-  382 (470)
T ss_dssp             HHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS-G-
T ss_pred             HHhCCHHHHHHHHHHHhcCCCcccc-ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC-C-
Confidence            9999999999999999999999985 599999999999 99999999999999999999999 99999999999 32 1 


Q ss_pred             CCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          435 FMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       435 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ....+..++|||+|+|.|+|++||.+|++++++.|+++|+++ .++.    .+.....+++..|+ ++.+++++|+
T Consensus       383 ~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~----~~~~~~~~~~~~p~-~~~v~~~~R~  452 (470)
T 2ij2_A          383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTN----YELDIKETLTLKPE-GFVVKAKSKK  452 (470)
T ss_dssp             GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTC----CCCCEEESSSEEET-TCEEEEEECC
T ss_pred             CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCC----CccccccceEecCC-CeEEEEEEcc
Confidence            112346789999999999999999999999999999999998 3221    12333345566676 8899888885


No 21 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=8.2e-72  Score=548.67  Aligned_cols=436  Identities=20%  Similarity=0.353  Sum_probs=327.5

Q ss_pred             CCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCccc-ccCCCccchhhh
Q 047291           44 HNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIF-SNRPKTTAADIF  122 (511)
Q Consensus        44 ~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~-~~~~~~~~~~~~  122 (511)
                      ...||||+++|++||++.+..+++.++.++++ ||+||++++++.++++|+||+++++|+.++  .| ...+........
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~   98 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL   98 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred             CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh
Confidence            44688999999999999988889999999987 999999999999999999999999999866  34 222222111111


Q ss_pred             ccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhc
Q 047291          123 LYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVF  202 (511)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  202 (511)
                       . +...+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+    ++++|+.+++..+++++++.++|
T Consensus        99 -~-g~~~l~~~dg~~h~~~R~~-l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~vi~~~~~  171 (467)
T 3dbg_A           99 -L-GKEGVATANGPLHRRQRRT-IQPAFRLDAIPAYGPIMEEEAHALTERWQP----GKTVDATSESFRVAVRVAARCLL  171 (467)
T ss_dssp             -------------------CGG-GHHHHSTTTSTTTHHHHHHHHHHHHHHSCT----TSCEEHHHHHHHHHHHHHHHHHS
T ss_pred             -c-CCCCcccCCcHHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHhcc----CCcCcHHHHHHHHHHHHHHHHHh
Confidence             1 2234566789999999999 588999999999999999999999988753    57899999999999999999999


Q ss_pred             cccccc--hhhHHHHHHHHHHhcccccccccccc--chhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 047291          203 GKKANE--ESKFGTISRRLTTQLQAFSFGDVFPA--LGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVA  278 (511)
Q Consensus       203 G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  278 (511)
                      |.+++.  .+.+......+....   .....+|+  +.++.  ....+...++.+.+.+++.+.++++++.     ....
T Consensus       172 g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~  241 (467)
T 3dbg_A          172 RGQYMDERAERLCVALATVFRGM---YRRMVVPLGPLYRLP--LPANRRFNDALADLHLLVDEIIAERRAS-----GQKP  241 (467)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHC-----------------------------CCHHHHHHHHHHHHHHHTTC-----CSSC
T ss_pred             CCcccchhHHHHHHHHHHHHHHH---HHHhccchhhhhhCC--ChHhHHHHHHHHHHHHHHHHHHHHHHhc-----CCCc
Confidence            998864  233444433333222   11222332  12211  1123345566778888899999888754     2345


Q ss_pred             ccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccc
Q 047291          279 KDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDI  358 (511)
Q Consensus       279 ~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l  358 (511)
                      .|+++.|+++..+++  ..++++++.++++.+++||+|||+++++|++++|++||++|++||+|+++++++ ..++.+++
T Consensus       242 ~dll~~ll~~~~~~~--~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~l  318 (467)
T 3dbg_A          242 DDLLTALLEAKDDNG--DPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFEDV  318 (467)
T ss_dssp             CSHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCCHHHH
T ss_pred             hHHHHHHHhhccCCC--CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCHHHH
Confidence            799999997754432  359999999999999999999999999999999999999999999999999875 67899999


Q ss_pred             cCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCC
Q 047291          359 NQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGE  438 (511)
Q Consensus       359 ~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~  438 (511)
                      ++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|||+||++++.. ...
T Consensus       319 ~~l~yl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~-~~~  396 (467)
T 3dbg_A          319 RKLRHTGNVIVEAMRLRPAVWVL-TRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA-NVP  396 (467)
T ss_dssp             TTCHHHHHHHHHHHHHSCSCCCE-EEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHT-TSC
T ss_pred             hhCHHHHHHHHHHhhcCCCcccc-ceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccc-cCC
Confidence            99999999999999999999874 6999999999999999999999999999999999999999999999965322 224


Q ss_pred             CcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          439 DFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       439 ~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      +..++|||+|+|.|+|++||.+|++++++.|+++|++++.++..     .....++++.|+ ++.++...|+
T Consensus       397 ~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~~~~~~~~p~-~l~~~~~~~~  462 (467)
T 3dbg_A          397 KYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN-----DAVRVGITLRPH-DLLVRPVARH  462 (467)
T ss_dssp             TTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCE-----EEEEESSSEEEE-ECEEEEEECC
T ss_pred             CccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCC-----CccceeeEecCC-CCccchhhhh
Confidence            56799999999999999999999999999999999999876532     233446666665 7777777665


No 22 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=8.7e-71  Score=541.00  Aligned_cols=442  Identities=19%  Similarity=0.342  Sum_probs=352.8

Q ss_pred             CCCCCCCC-CCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchh
Q 047291           42 GNHNLPPC-PPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAAD  120 (511)
Q Consensus        42 ~~~~~~pg-p~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~  120 (511)
                      ++.+.||| |+++|++||++.+..+++.++.+++++||+||+++++|.+.++|++|+++++++.++...+.....+....
T Consensus         8 ~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~   87 (461)
T 3i3k_A            8 AGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT   87 (461)
T ss_dssp             --CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhh
Confidence            45678999 88999999999888889999999999999999999999999999999999999987655444322221111


Q ss_pred             hhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhh
Q 047291          121 IFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRC  200 (511)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~  200 (511)
                      .... +.+..++.+++.|+++|++ +.+.|++..++.+.+.+.++++++++.|.+    +..+|+.+++..+++++++.+
T Consensus        88 ~~~~-g~g~~~~~~g~~w~~~Rr~-~~~~f~~~~l~~~~~~~~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~~~~~  161 (461)
T 3i3k_A           88 TPVF-GKGVAYDVPNPVFLEQKKM-LKSGLNIAHFKQHVSIIEKETKEYFESWGE----SGEKNVFEALSELIILTASHC  161 (461)
T ss_dssp             HHHH-CTTSGGGSCHHHHHHHHHH-HHHHSSHHHHHHHHHHHHHHHHHHGGGGCS----EEEEEHHHHHHHHHHHHHHHH
T ss_pred             hhhc-CCeeeeCCCcHHHHHHHHH-HhhhhCHHHHHHHHHHHHHHHHHHHHHhhh----cCCcCHHHHHHHHHHHHHHHH
Confidence            1111 3345556679999999999 578899999999999999999999887753    346899999999999999999


Q ss_pred             hccccccc--hhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 047291          201 VFGKKANE--ESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVA  278 (511)
Q Consensus       201 ~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  278 (511)
                      +||.++..  .+.+......+......  ....+|.  |+.  ....++..++.+.+.+++.+.++++++.     .+..
T Consensus       162 ~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~--~l~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~  230 (461)
T 3i3k_A          162 LHGKEIRSQLNEKVAQLYADLDGGFSH--AAWLLPG--WLP--LPSFRRRDRAHREIKDIFYKAIQKRRQS-----QEKI  230 (461)
T ss_dssp             HTCHHHHHTCCHHHHHHHHHHHTTSSH--HHHHSCT--TSC--CHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCC
T ss_pred             HccHhhhhHHHHHHHHHHHHHHhcccc--chhhccc--ccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cccc
Confidence            99987753  22333333333222111  1112231  111  0123445677888888999999888754     2345


Q ss_pred             ccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCC-cCCccc
Q 047291          279 KDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKL-KVEASD  357 (511)
Q Consensus       279 ~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~-~~~~~~  357 (511)
                      .|+++.+++...+++  ..+++++++.+++.+++||+|||+.+++|++++|++||++|+++|+||+++++++. .++.++
T Consensus       231 ~d~l~~ll~~~~~~~--~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~  308 (461)
T 3i3k_A          231 DDILQTLLDATYKDG--RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQ  308 (461)
T ss_dssp             CSHHHHHHTCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHH
T ss_pred             ccHHHHHHHhhhccC--CCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence            789999998764432  35999999999999999999999999999999999999999999999999998753 458899


Q ss_pred             ccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCC
Q 047291          358 INQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMG  437 (511)
Q Consensus       358 l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~  437 (511)
                      ++++|||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++.+.. ..
T Consensus       309 ~~~l~~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~-~~  386 (461)
T 3i3k_A          309 LKDLNLLDRCIKETLRLRPPIMIM-MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA-SG  386 (461)
T ss_dssp             HHTCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHH-HH
T ss_pred             HhcChHHHHHHHHHHhcCCCcccc-ccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCC-CC
Confidence            999999999999999999999764 6999999999999999999999999999999999999999999999976432 12


Q ss_pred             CCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeec
Q 047291          438 EDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVM  508 (511)
Q Consensus       438 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (511)
                      .+..++|||+|+|.|||++||.+|++++++.|+++|||+++++..   +... ....+..|++++.++-++
T Consensus       387 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~-~~~~~~~p~~~~~~~~~~  453 (461)
T 3i3k_A          387 EKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYF---PTVN-YTTMIHTPENPVIRYKRR  453 (461)
T ss_dssp             SSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCC---CCBC-CSSSSCCBSSCEEEEEEC
T ss_pred             CCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCC---CCcc-cceeecCCCCceEEeecc
Confidence            456899999999999999999999999999999999999877642   2222 234456788888887654


No 23 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=3.1e-68  Score=526.93  Aligned_cols=446  Identities=17%  Similarity=0.232  Sum_probs=342.0

Q ss_pred             hCCCCCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCc-ccccCCCcc
Q 047291           40 KGGNHNLPPCPPK-LPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDI-IFSNRPKTT  117 (511)
Q Consensus        40 ~~~~~~~~pgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~-~~~~~~~~~  117 (511)
                      ++++.+.||||++ +|++||++.+..+++.++.+++++||+||++++++.++++|++|+++++|++++.. .+..+....
T Consensus         8 ~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~   87 (491)
T 3v8d_A            8 RRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFAL   87 (491)
T ss_dssp             CCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHH
T ss_pred             hccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHH
Confidence            3455678999998 69999999999999999999999999999999999999999999999999976541 222211111


Q ss_pred             chhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhcc---CCCceeHHHHHHHHHH
Q 047291          118 AADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASL---KGASVNLSEMLLTVTN  194 (511)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~---~~~~vdl~~~~~~~~~  194 (511)
                      ....+   +.+.+...+|+.|+++|+. +.+.|++..++.+.+.+.+.+.++++.+.....   .+..+++.+++..+++
T Consensus        88 ~~~~~---g~~~~~~~~g~~~~~~Rr~-~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~  163 (491)
T 3v8d_A           88 SAKAF---GHRSIDPMDGNTTENINDT-FIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMF  163 (491)
T ss_dssp             HHHHH---TCCCCCGGGSSBCCCHHHH-HHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHH
T ss_pred             HHHhc---CCcccccccchhHHHHHHH-HHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHH
Confidence            11222   2233344569999999998 678999999999999999999998875533222   3467899999999999


Q ss_pred             Hhhhhhhccccccchhh----HHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047291          195 DTVGRCVFGKKANEESK----FGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLE  270 (511)
Q Consensus       195 ~~~~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  270 (511)
                      ++++..+||.+..+.++    +......+..      +.+.+|.+.+... ....++..++.+.+.+++.+.+++++   
T Consensus       164 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~p-~~~~~~~~~a~~~l~~~~~~~~~~~~---  233 (491)
T 3v8d_A          164 EAGYLTIFGRDLTRRDTQKAHILNNLDNFKQ------FDKVFPALVAGLP-IHMFRTAHNAREKLAESLRHENLQKR---  233 (491)
T ss_dssp             HHHHHHHHCBCCSCGGGHHHHHHHHHHHHHH------HHHHHHHHHTTCC-GGGCHHHHHHHHHHHHHTSHHHHTTC---
T ss_pred             HHHHHHHcCccccccchhhhhhHHHHHHHHH------HHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence            99999999998764222    2222222221      2222333222111 12334556666666666655544332   


Q ss_pred             CCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCC
Q 047291          271 RPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKK  350 (511)
Q Consensus       271 ~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  350 (511)
                           ....|+++.+++...+.   +.+++++++.+++.+++||++||+++++|++++|++||++|++||+||+++++++
T Consensus       234 -----~~~~d~l~~l~~~~~~~---~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  305 (491)
T 3v8d_A          234 -----ESISELISLRMFLNDTL---STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENA  305 (491)
T ss_dssp             -----BSCCHHHHHHHHHHHHH---BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHT
T ss_pred             -----ccccHHHHHHHHHhhcc---CCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcc
Confidence                 23468899888765443   2589999999999999999999999999999999999999999999999998754


Q ss_pred             ----------CcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCccee----cCeeeCCCcEEEeehHHhhcCCCC
Q 047291          351 ----------LKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM----GGYEIPAKTRVFANAWAIQRDPKL  416 (511)
Q Consensus       351 ----------~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~~~~~~d~~~  416 (511)
                                ..++.++++++|||+|||+|+||++|+ +. .+|.+.+|+++    +||.||||+.|.++.+.+|+||++
T Consensus       306 ~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~  383 (491)
T 3v8d_A          306 GQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEI  383 (491)
T ss_dssp             TCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTT
T ss_pred             ccccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCccc
Confidence                      346778899999999999999999974 34 45999999999    999999999999999999999999


Q ss_pred             CCCCCCCCCCCcCCCCCCCC--------CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCC-CCCC
Q 047291          417 WDNPEEFIPERFYNNPVNFM--------GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVG-EDLD  487 (511)
Q Consensus       417 ~~~p~~F~p~R~~~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~-~~~~  487 (511)
                      |+||++|||+||++.+....        ..+..|+|||+|+|.|+|++||.+|++++++.|+++||++++++... .+.+
T Consensus       384 ~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~  463 (491)
T 3v8d_A          384 YPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLD  463 (491)
T ss_dssp             SSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBC
T ss_pred             CCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCC
Confidence            99999999999997653311        13567899999999999999999999999999999999999876421 1222


Q ss_pred             CccccCceecccCceeEEeecc
Q 047291          488 MTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      .......+..|+.+|.|+++=.
T Consensus       464 ~~~~~~~~~~p~~~i~v~~~~~  485 (491)
T 3v8d_A          464 QSRAGLGILPPLNDIEFKYKFK  485 (491)
T ss_dssp             GGGTBEEECCBSSCCEEEEEEC
T ss_pred             cccCcCcccCCCCCeEEEEEec
Confidence            2222334578899999988743


No 24 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=8.8e-68  Score=524.35  Aligned_cols=448  Identities=16%  Similarity=0.228  Sum_probs=327.4

Q ss_pred             CCCCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCcc-ch
Q 047291           42 GNHNLPPCPPK-LPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTT-AA  119 (511)
Q Consensus        42 ~~~~~~pgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~-~~  119 (511)
                      ...+.||||++ +|++||+..+..+++.++.++++|||+||++++++.++++|+||+++++|+.++.. +....... ..
T Consensus        10 ~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~~~   88 (491)
T 3dax_A           10 RQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFATS   88 (491)
T ss_dssp             CCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHHHH
T ss_pred             cCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHHHH
Confidence            34567899887 89999999988888999999999999999999999999999999999999976542 21111111 11


Q ss_pred             hhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHh---ccCCCceeHHHHHHHHHHHh
Q 047291          120 DIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRA---SLKGASVNLSEMLLTVTNDT  196 (511)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~~~vdl~~~~~~~~~~~  196 (511)
                      ... . +.+.+...+++.|+++|+.+ .+.|+...++.+.+.+.+.+.+.+......   ...+..+++..++..+++++
T Consensus        89 ~~~-~-g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  165 (491)
T 3dax_A           89 AKA-F-GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEA  165 (491)
T ss_dssp             HHH-H-TCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHH
T ss_pred             HHH-c-CCCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHH
Confidence            111 1 22223144688899888884 568888888888888877777776654322   12334689999999999999


Q ss_pred             hhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 047291          197 VGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKS  276 (511)
Q Consensus       197 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  276 (511)
                      ++.++||.+....++.......+.....  .+...+|.+.+... ....+...+..+.+.+.+   ++++.+.     ..
T Consensus       166 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~lp-~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~  234 (491)
T 3dax_A          166 GYLTIFGRDLTRRDTQKAHILNNLDNFK--QFDKVFPALVAGLP-IHMFRTAHNAREKLAESL---RHENLQK-----RE  234 (491)
T ss_dssp             HHHHHHCBCSTTGGGHHHHHHHHHHHHH--HHHHHHHHHHTTCC-GGGSHHHHHHHHHHHHHT---SHHHHTT-----CB
T ss_pred             hHHHHcCcccccccchhhhhhHHHHHHH--HHHHHhHHHHHhCC-HhhhhHHHHHHHHHHHHH---HHHHhhc-----cc
Confidence            9999999887644322222222222111  11233443322100 012223333333333322   2222221     23


Q ss_pred             ccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCC-----
Q 047291          277 VAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKL-----  351 (511)
Q Consensus       277 ~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~-----  351 (511)
                      ...|+++.+++...+.   ..++++++.++++.+++||+|||+++++|++++|++||++|+||++||+++++.++     
T Consensus       235 ~~~d~l~~ll~~~~~~---~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~  311 (491)
T 3dax_A          235 SISELISLRMFLNDTL---STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSL  311 (491)
T ss_dssp             SCCHHHHHHHHHHHHH---BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCS
T ss_pred             chhHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhcccccccc
Confidence            3568999888764432   24789999999999999999999999999999999999999999999999997643     


Q ss_pred             -----cCCcccccCchhHHHHHhhhcCCCCCCccccccccCCccee----cCeeeCCCcEEEeehHHhhcCCCCCCCCCC
Q 047291          352 -----KVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM----GGYEIPAKTRVFANAWAIQRDPKLWDNPEE  422 (511)
Q Consensus       352 -----~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  422 (511)
                           .++.+++++||||+|||+||||++|+ +. .+|.+.+|+++    +||.|||||.|+++.+.+|+||++|+||++
T Consensus       312 ~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~  389 (491)
T 3dax_A          312 EGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLT  389 (491)
T ss_dssp             SSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTTS
T ss_pred             CCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHHH
Confidence                 35889999999999999999999975 54 46999999999    789999999999999999999999999999


Q ss_pred             CCCCCcCCCCCCCC--------CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCcc-ccC
Q 047291          423 FIPERFYNNPVNFM--------GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTE-TFG  493 (511)
Q Consensus       423 F~p~R~~~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~-~~~  493 (511)
                      |+||||++.+....        ..+..++|||+|+|.|||++||++|+++++|.||++|||++.++.. ..++.+. ..+
T Consensus       390 F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~  468 (491)
T 3dax_A          390 FKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA-KCPPLDQSRAG  468 (491)
T ss_dssp             CCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTC-CCCCBCGGGTB
T ss_pred             cCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCC-CCCCCCccccc
Confidence            99999996542211        1356899999999999999999999999999999999999876532 1223332 123


Q ss_pred             c-eecccCceeEEeeccC
Q 047291          494 L-TVFKKIPLYLVPVMYS  510 (511)
Q Consensus       494 ~-~~~~~~~~~~~~~~r~  510 (511)
                      . +..|+.++.+++|.++
T Consensus       469 ~~~~~p~~~~~~~~r~~~  486 (491)
T 3dax_A          469 LGILPPLNDIEFKYKFKH  486 (491)
T ss_dssp             EEECCBSSCCEEEEEECC
T ss_pred             ccccCCCCCceEEEEecc
Confidence            3 5688899999998765


No 25 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=5e-65  Score=493.29  Aligned_cols=402  Identities=17%  Similarity=0.218  Sum_probs=311.8

Q ss_pred             CCCCCCCCCCCCCCcccccc-cCCCCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCCCccc
Q 047291           41 GGNHNLPPCPPKLPIIGNLH-QLGNLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA  118 (511)
Q Consensus        41 ~~~~~~~pgp~~~p~iG~~~-~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~  118 (511)
                      ++.++.||||+++|++|++. .+..+++..+.++ ++||+||++++ ++.++++|+||+++++|+.++  .|.+++....
T Consensus        22 ~~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~   98 (436)
T 2cd8_A           22 RRTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNST   98 (436)
T ss_dssp             ------------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCS
T ss_pred             chhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccc
Confidence            33456799999999999976 5567899999999 99999999997 778899999999999999865  4555432111


Q ss_pred             hhhh---ccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHH
Q 047291          119 ADIF---LYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTN  194 (511)
Q Consensus       119 ~~~~---~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~  194 (511)
                      ....   ...+ ..+++.+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+.+.  .++++|+.+++ ..+++
T Consensus        99 ~~~~~~~~~~~-~~l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~  174 (436)
T 2cd8_A           99 TPLTEAEAALN-HNMLESDPPRHTRLRKL-VAREFTMRRVELLRPRVQEIVDGLVDAMLAA--PDGRADLMESLAWPLPI  174 (436)
T ss_dssp             SCCCTTGGGTC-CSGGGCCTTHHHHHHHH-HGGGSSHHHHHTTHHHHHHHHHHHHHHHHTC--TTSCEEHHHHTTTHHHH
T ss_pred             ccccccccccc-ccccccCchHHHHHHHH-hHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCcchHHHHHHHHHH
Confidence            1100   1112 34556789999999999 5889999999999999999999999999742  35689999977 57999


Q ss_pred             HhhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 047291          195 DTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDD  274 (511)
Q Consensus       195 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  274 (511)
                      ++++. +||.+..+.+.+......+...      .   +         .  ++..++.+.+.+++.+.|+++++.     
T Consensus       175 ~vi~~-~~G~~~~~~~~~~~~~~~~~~~------~---~---------~--~~~~~~~~~~~~~~~~~i~~r~~~-----  228 (436)
T 2cd8_A          175 TVISE-LLGVPEPDRAAFRVWTDAFVFP------D---D---------P--AQAQTAMAEMSGYLSRLIDSKRGQ-----  228 (436)
T ss_dssp             HHHHH-HHTCCGGGHHHHHHHHHHHHSC------S---S---------T--THHHHHHHHHHHHHHHHHHHHTTS-----
T ss_pred             HHHHH-HhCCCHHHHHHHHHHHHHHhcc------C---C---------H--HHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence            99998 7999876555555444333210      0   0         0  335667788889999999888742     


Q ss_pred             ccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCC
Q 047291          275 KSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVE  354 (511)
Q Consensus       275 ~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~  354 (511)
                        ..+|+++.|+++..+.+  ..++++++.+++..+++||+|||+++++|++++|++||++|+||++|+           
T Consensus       229 --~~~d~l~~ll~~~~~~~--~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~-----------  293 (436)
T 2cd8_A          229 --DGEDLLSALVRTSDEDG--SRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM-----------  293 (436)
T ss_dssp             --CCCSHHHHHHHHHHHCT--TTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------
T ss_pred             --CCCCHHHHHHHhhhccC--CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh-----------
Confidence              23689999998654322  369999999999999999999999999999999999999999999983           


Q ss_pred             cccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCC
Q 047291          355 ASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVN  434 (511)
Q Consensus       355 ~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~  434 (511)
                             .|++|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||-     
T Consensus       294 -------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-----  361 (436)
T 2cd8_A          294 -------TLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT-----  361 (436)
T ss_dssp             -------GGHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC-----
T ss_pred             -------hhHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC-----
Confidence                   47999999999999999966679999999999999999999999999999999999999999999951     


Q ss_pred             CCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccCC
Q 047291          435 FMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYSA  511 (511)
Q Consensus       435 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  511 (511)
                           ..++|||+|+|.|+|++||++|++++++.|+++| ++++..+.  +++.+..  +.+..+..++.|++++|++
T Consensus       362 -----~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~--~~~~~~~~~l~v~~~~r~~  430 (436)
T 2cd8_A          362 -----AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSP--GELVWYP--NPMIRGLKALPIRWRRGRE  430 (436)
T ss_dssp             -----TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCG--GGCCBCC--CTTBCCBSCCEEC------
T ss_pred             -----CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCC--ccceecc--CcccCCcceeEEEEecCcc
Confidence                 3689999999999999999999999999999999 69986432  2233333  3334667788888888763


No 26 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=1.8e-65  Score=508.19  Aligned_cols=448  Identities=14%  Similarity=0.140  Sum_probs=319.7

Q ss_pred             hhCCCCCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCcc
Q 047291           39 IKGGNHNLPPCPPK-LPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTT  117 (511)
Q Consensus        39 ~~~~~~~~~pgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~  117 (511)
                      .+.++.+.||||++ +|++||++.+..+++.++.++++|||+||++++++.++++|+||+++++++.++...+...+...
T Consensus        12 ~~~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~   91 (498)
T 3b6h_A           12 RRTRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAI   91 (498)
T ss_dssp             -CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHH
T ss_pred             HhccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHH
Confidence            34455678999988 89999998887778999999999999999999999999999999999999976543222222111


Q ss_pred             chhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHh-ccCCCceeHHHHHHHHHHHh
Q 047291          118 AADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRA-SLKGASVNLSEMLLTVTNDT  196 (511)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~~vdl~~~~~~~~~~~  196 (511)
                      ....... +.+.+ ..+++.|+   +. ..+.|+...++.+.+.+.+.+...+...... ...+..+++..++..+++++
T Consensus        92 ~~~~~~~-g~~~~-~~~~~~~r---r~-~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~  165 (498)
T 3b6h_A           92 FLMERIF-DVQLP-HYSPSDEK---AR-MKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRA  165 (498)
T ss_dssp             HHHHHTS-CCCCT-TCCHHHHH---HH-HHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHc-CCCcc-ccCHHHHH---HH-HHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHH
Confidence            1111111 22222 44566664   44 3457888888888777777777776655332 22345689999999999999


Q ss_pred             hhhhhccccccchhh-----HHHHHHHHHHhccccccccccccchhhhhccC-chHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047291          197 VGRCVFGKKANEESK-----FGTISRRLTTQLQAFSFGDVFPALGWMDHLTG-LIPCVKATFRSLDAFFDDVIAEHRNLE  270 (511)
Q Consensus       197 ~~~~~fG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~  270 (511)
                      ++.++||.+++..+.     .............  .+.+.+|++.+. .+.. ..+...++.+.+.+   .+++++.++ 
T Consensus       166 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-  238 (498)
T 3b6h_A          166 GYLTLYGIEALPRTHESQAQDRVHSADVFHTFR--QLDRLLPKLARG-SLSVGDKDHMCSVKSRLWK---LLSPARLAR-  238 (498)
T ss_dssp             HHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHT-CCCHHHHHHHHHHHHHHHH---HTCHHHHTT-
T ss_pred             HHHhhcCcccccccccchhhHHHhhHHHHHHHH--HHHhhHHHHHHH-hcCchhhHHHHHHHHHHHH---HHHHHHHhc-
Confidence            999999997643221     2222222222211  122334433220 0110 01122222222222   222233221 


Q ss_pred             CCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCC
Q 047291          271 RPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKK  350 (511)
Q Consensus       271 ~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  350 (511)
                          .....|+++.+++...+.   +.++++++. +++.+++||++||+++++|++++|++||++|+||++||+++++++
T Consensus       239 ----~~~~~d~l~~ll~~~~~~---~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~  310 (498)
T 3b6h_A          239 ----RAHRSKWLESYLLHLEEM---GVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQA  310 (498)
T ss_dssp             ----CBSCCHHHHHHHHHHHHT---TCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC-
T ss_pred             ----cccHHHHHHHHHHHHHhC---CCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccc
Confidence                234568999988765432   246777777 888899999999999999999999999999999999999999865


Q ss_pred             Cc-------CCcccccCchhHHHHHhhhcCCCCCCccccccccCCccee-----cCeeeCCCcEEEeehHH-hhcCCCCC
Q 047291          351 LK-------VEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM-----GGYEIPAKTRVFANAWA-IQRDPKLW  417 (511)
Q Consensus       351 ~~-------~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i-----~g~~ip~G~~v~~~~~~-~~~d~~~~  417 (511)
                      +.       ++.+++++||||+|||+|+||++|+ +. .+|.+.+|+++     +||.||||+.|+++.+. +|+||++|
T Consensus       311 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~  388 (498)
T 3b6h_A          311 EQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIY  388 (498)
T ss_dssp             ---------CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS
T ss_pred             CCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCcccc
Confidence            42       5889999999999999999999985 54 46999999988     68999999999999999 99999999


Q ss_pred             CCCCCCCCCCcCCCCCCCC--------CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCc
Q 047291          418 DNPEEFIPERFYNNPVNFM--------GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMT  489 (511)
Q Consensus       418 ~~p~~F~p~R~~~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  489 (511)
                      +||++|+||||++.+....        ..+..++|||+|+|.|||++||.+|+++++|.|+++|||+++++.. ..+..+
T Consensus       389 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~  467 (498)
T 3b6h_A          389 TDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADV-EIPEFD  467 (498)
T ss_dssp             SSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTC-CCCCBC
T ss_pred             CChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCC-CCCCCC
Confidence            9999999999997543211        1356899999999999999999999999999999999999876532 112222


Q ss_pred             c--ccCceecccCceeEEeeccC
Q 047291          490 E--TFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       490 ~--~~~~~~~~~~~~~~~~~~r~  510 (511)
                      .  ....+..|+.++.|++++|-
T Consensus       468 ~~~~~~~~~~p~~~~~~~~~~~~  490 (498)
T 3b6h_A          468 LSRYGFGLMQPEHDVPVRYRIRP  490 (498)
T ss_dssp             GGGTBSSBCCBSSCCEEEEEECC
T ss_pred             ccccccccCCCCCCccEEEEecc
Confidence            2  22334688888999888773


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=9.1e-66  Score=507.72  Aligned_cols=440  Identities=15%  Similarity=0.183  Sum_probs=309.9

Q ss_pred             hCCCCCCCCCCCC-CCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCc-c
Q 047291           40 KGGNHNLPPCPPK-LPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKT-T  117 (511)
Q Consensus        40 ~~~~~~~~pgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~-~  117 (511)
                      ++++.+.||||++ +|++||++.+..+++.++.+++++||+||++++++.++++|++|+++++|+.++.. +...... .
T Consensus        13 ~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~   91 (475)
T 3b98_A           13 RTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQV   91 (475)
T ss_dssp             CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHH
T ss_pred             cccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHH
Confidence            3445678999988 99999999887789999999999999999999999999999999999999976542 2221111 1


Q ss_pred             chhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhc--cCCCceeHHHHHHHHHHH
Q 047291          118 AADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRAS--LKGASVNLSEMLLTVTND  195 (511)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~--~~~~~vdl~~~~~~~~~~  195 (511)
                      ..... . +.+. +..+++.|   |+. ..+.|++..++.+.+.+.+.+.++++.+....  .....+++..++..++++
T Consensus        92 ~~~~~-~-g~~~-~~~~~~~~---R~~-~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (475)
T 3b98_A           92 LMKRI-F-NMIL-PSHNPESE---KKR-AEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFK  164 (475)
T ss_dssp             HHHHT-T-CCCC-TTCCHHHH---HHH-HHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHH
T ss_pred             HHHHH-h-CCCC-CCCChHHH---HHH-HHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHH
Confidence            11111 1 2222 24456655   455 45688999999999999888888887654321  122357899999999999


Q ss_pred             hhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 047291          196 TVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDK  275 (511)
Q Consensus       196 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  275 (511)
                      +++...||.+....+.+......+...      .+.+|++.+ ..+ +  ....+......+.+.+.+.+...    ...
T Consensus       165 ~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~p~l~~-~~~-~--~~~~~~~~~~~~~~~~~~~~~~~----~~~  230 (475)
T 3b98_A          165 TGYLTVFGAENNNSAALTQIYEEFRRF------DKLLPKLAR-TTV-N--KEEKQIASAAREKLWKWLTPSGL----DRK  230 (475)
T ss_dssp             HHHHHHHCCTTSCHHHHHHHHHHHHHH------HHHHHHHHT-TCC-C--HHHHHHHHHHHHHHHHHHSCTTS----CCC
T ss_pred             HhhhheeCCccccchhcHHHHHHHHHH------HhhhHHHHH-Hhc-C--hhhhHHHHHHHHHHHHHHHHHHh----hcc
Confidence            999989996533322333333222211      122333221 001 1  11111111222222222211111    112


Q ss_pred             cccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCc
Q 047291          276 SVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEA  355 (511)
Q Consensus       276 ~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~  355 (511)
                      ....|+++.+++...+.   +.++++++. +++.+++||+|||+++++|++++|++||++|++||+|++  .+ +..++.
T Consensus       231 ~~~~d~l~~ll~~~~~~---~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~-~~~~~~  303 (475)
T 3b98_A          231 PREQSWLGSYVKQLQDE---GIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GG-KHLRLE  303 (475)
T ss_dssp             CCTTSHHHHHHHHHHHT---TCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-----------
T ss_pred             ccccHHHHHHHHHHHHc---CCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cC-CCCCCH
Confidence            34578999998765432   247788888 999999999999999999999999999999999999998  22 234688


Q ss_pred             ccccCchhHHHHHhhhcCCCCCCccccccccCCccee-----cCeeeCCCcEEEeehHH-hhcCCCCCCCCCCCCCCCcC
Q 047291          356 SDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM-----GGYEIPAKTRVFANAWA-IQRDPKLWDNPEEFIPERFY  429 (511)
Q Consensus       356 ~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~p~~F~p~R~~  429 (511)
                      +++++||||+|||+|+||++|+ +. .+|.+.+|+++     +||.||||+.|+++.++ +|+||++|+||++||||||+
T Consensus       304 ~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl  381 (475)
T 3b98_A          304 ERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFL  381 (475)
T ss_dssp             ----CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTB
T ss_pred             HHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhc
Confidence            9999999999999999999986 54 56999999999     88999999999999999 99999999999999999999


Q ss_pred             CCCCCC--------CCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCcc--ccCceeccc
Q 047291          430 NNPVNF--------MGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTE--TFGLTVFKK  499 (511)
Q Consensus       430 ~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~--~~~~~~~~~  499 (511)
                      +.+...        ...+..++|||+|+|.|+|++||.+|++++++.|+++|+++++++.. ..+..+.  ....+..|+
T Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~p~  460 (475)
T 3b98_A          382 NADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNA-TVPLVDPSRYGFGILQPA  460 (475)
T ss_dssp             CTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTC-CCCCBCGGGTBEEECCBS
T ss_pred             CCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCC-CCCCCCcccccccccCCC
Confidence            654321        11356899999999999999999999999999999999999876532 1122222  223456788


Q ss_pred             CceeEEeeccCC
Q 047291          500 IPLYLVPVMYSA  511 (511)
Q Consensus       500 ~~~~~~~~~r~~  511 (511)
                      .++.+++++|++
T Consensus       461 ~~~~~~~~~R~~  472 (475)
T 3b98_A          461 GDLEIRYRIRFH  472 (475)
T ss_dssp             SCCEEEEEEC--
T ss_pred             CCceEEEEeccc
Confidence            899999999964


No 28 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=3.9e-63  Score=479.20  Aligned_cols=403  Identities=15%  Similarity=0.195  Sum_probs=319.2

Q ss_pred             CCcccccccCCCCCcHHHHHHHHhhC-CcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc-hhhhccCCceeE
Q 047291           53 LPIIGNLHQLGNLPHRSLRALSKKYG-PLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA-ADIFLYGCIDIA  130 (511)
Q Consensus        53 ~p~iG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  130 (511)
                      .|++||+..+..+++.++.++++||| |||++.++|.+.+++++|++++.++. + ..|........ ...... +.+.+
T Consensus         8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~-g~~~l   84 (417)
T 1izo_A            8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLF-GVNAI   84 (417)
T ss_dssp             CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTT-CTTCG
T ss_pred             CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhc-cccce
Confidence            49999999887889999999999998 89999998899999999999986543 2 23443322111 111111 22345


Q ss_pred             ecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhccccccchh
Q 047291          131 FSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGKKANEES  210 (511)
Q Consensus       131 ~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~  210 (511)
                      ++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.|.+    ++++|+.+++..+++++++.+ ||.++++. 
T Consensus        85 ~~~dg~~h~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~-  157 (417)
T 1izo_A           85 QGMDGSAHIHRKML-FLSLMTPPHQKRLAELMTEEWKAAVTRWEK----ADEVVLFEEAKEILCRVACYW-AGVPLKET-  157 (417)
T ss_dssp             GGCCHHHHHHHHHH-HHHTSSHHHHHHHHHHHHHHHHHHHHHHTT----SSEEEHHHHHHHHHHHHHHHH-HTCCCCTT-
T ss_pred             eecCChHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH-cCCCCCch-
Confidence            66789999999999 688999999999999999999999998854    568999999999999999998 59987653 


Q ss_pred             hHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcc
Q 047291          211 KFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQK  290 (511)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~  290 (511)
                      ++......+........  ...|          ......++.+.+.+++.++|+++++...   ....+|+++.|+++..
T Consensus       158 ~~~~~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~~d~l~~ll~~~~  222 (417)
T 1izo_A          158 EVKERADDFIDMVDAFG--AVGP----------RHWKGRRARPRAEEWIEVMIEDARAGLL---KTTSGTALHEMAFHTQ  222 (417)
T ss_dssp             THHHHHHHHHHHHHHTT--CCSH----------HHHHHHHHHHHHHHHHHHHHHHHHTTSS---CCCTTSHHHHHHHCBC
T ss_pred             HHHHHHHHHHHHHhhcc--cCCc----------cchhHHHHHHHHHHHHHHHHHHHHhhcc---CCCcCCHHHHHHHhcc
Confidence            23333333322221110  0011          1123556778889999999999886431   1234689999998654


Q ss_pred             ccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhh
Q 047291          291 DATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKE  370 (511)
Q Consensus       291 ~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  370 (511)
                      .++  ..++++++..++..+ +||++||+++++|++++|++||++|++|++|                 ++||++|||+|
T Consensus       223 ~~g--~~l~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~~l~a~i~E  282 (417)
T 1izo_A          223 EDG--SQLDSRMAAIELINV-LRPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSREREMFVQE  282 (417)
T ss_dssp             TTS--CBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHHHHHHHHHH
T ss_pred             ccC--CCCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------CCHHHHHHHHH
Confidence            322  357888777777654 5999999999999999999999999999997                 48999999999


Q ss_pred             hcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCC--
Q 047291          371 SLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAG--  448 (511)
Q Consensus       371 ~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G--  448 (511)
                      +||++|+++. .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|||+||++.+    ..+..++|||+|  
T Consensus       283 ~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~----~~~~~~~~FG~G~r  357 (417)
T 1izo_A          283 VRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE----ENLFDMIPQGGGHA  357 (417)
T ss_dssp             HHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC----CCSSSCCTTCSSCT
T ss_pred             HhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC----CCCcceeCCCCCCC
Confidence            9999999998 469999999999999999999999999999999999999999999999753    245689999999  


Q ss_pred             --CCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          449 --RRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       449 --~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                        +|.|+|++||.+|++++++.|+++|+++++++.    ..+. ...++..|++++.+++++|+
T Consensus       358 ~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~----~~~~-~~~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          358 EKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS----LHYS-LARMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             TSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCC----CCCC-SSSSSCCCTTCCEEEEEEEC
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC----cCcc-cccCCCCCCCCceEeeeeCC
Confidence              599999999999999999999999999986542    2222 22456789999999999986


No 29 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=8.6e-63  Score=474.70  Aligned_cols=375  Identities=14%  Similarity=0.185  Sum_probs=301.7

Q ss_pred             CCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeec-CcCEEEecCHHHHHHHHHhcC-cccccCCCccchhh--
Q 047291           46 LPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWG-QTPTVIVSSADMAKEMMKTHD-IIFSNRPKTTAADI--  121 (511)
Q Consensus        46 ~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~vvv~~p~~i~~i~~~~~-~~~~~~~~~~~~~~--  121 (511)
                      .||||+++|++|++..   +++..+.+++ +||+|+++.++ |.+.++|++++++++++.++. ..+..++.......  
T Consensus         2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~   77 (404)
T 1jfb_A            2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG   77 (404)
T ss_dssp             ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred             CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence            4899999999998654   7899999986 69999999874 667788999999999998653 22222332221111  


Q ss_pred             -hccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhh
Q 047291          122 -FLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRC  200 (511)
Q Consensus       122 -~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~  200 (511)
                       ....+...+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+...+++++|+.+.+...+.++++..
T Consensus        78 ~~~~~~~~~l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~  156 (404)
T 1jfb_A           78 KQAAKAKPTFVDMDPPEHMHQRSM-VEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYT  156 (404)
T ss_dssp             HHHTTSCCCGGGCCTTHHHHHHTT-TGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHH
T ss_pred             cchhcccCcccccCchhHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHH
Confidence             01112234556689999999999 6899999999999999999999999999875434568999999999999999999


Q ss_pred             hccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 047291          201 VFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKD  280 (511)
Q Consensus       201 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  280 (511)
                      +||.+.++.+.+.....    ....           +.    ...+...++.+.+.+++.+.++++++.       ..+|
T Consensus       157 ~~G~~~~~~~~~~~~~~----~~~~-----------~~----~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d  210 (404)
T 1jfb_A          157 LLGVPFNDLEYLTQQNA----IRTN-----------GS----STAREASAANQELLDYLAILVEQRLVE-------PKDD  210 (404)
T ss_dssp             HHTCCGGGHHHHHHHHH----HHHC-----------TT----SCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSS
T ss_pred             HcCCCHHHHHHHHHHHH----HHhc-----------cC----cchHHHHHHHHHHHHHHHHHHHHHHhC-------CCCc
Confidence            99998754322222111    1100           00    122345667788889999999888753       2468


Q ss_pred             HHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccC
Q 047291          281 FVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQ  360 (511)
Q Consensus       281 ~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~  360 (511)
                      +++.|+++..++   ..++++++.+++..+++||+|||+++++|++++|++||++|+||+++                  
T Consensus       211 ~l~~ll~~~~~~---~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~------------------  269 (404)
T 1jfb_A          211 IISKLCTEQVKP---GNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN------------------  269 (404)
T ss_dssp             HHHHHHHHTTTT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC------------------
T ss_pred             HHHHHHHhhccC---CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC------------------
Confidence            999999654322   36999999999999999999999999999999999999999999982                  


Q ss_pred             chhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 047291          361 MEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDF  440 (511)
Q Consensus       361 lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~  440 (511)
                      .+|++|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+++        .
T Consensus       270 ~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~--------~  341 (404)
T 1jfb_A          270 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP--------Q  341 (404)
T ss_dssp             GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS--------S
T ss_pred             hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC--------C
Confidence            47999999999999999996667999999999999999999999999999999999999999999999853        1


Q ss_pred             ceeecCCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCC
Q 047291          441 HYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGD  480 (511)
Q Consensus       441 ~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~  480 (511)
                      .++|||+|+|.|+|++||++|++++++.|+++| ++++..+
T Consensus       342 ~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          342 DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence            489999999999999999999999999999999 7998643


No 30 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=1.5e-62  Score=472.18  Aligned_cols=386  Identities=16%  Similarity=0.232  Sum_probs=307.5

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEe----e-cC-cCEEEecCHHHHHHHH-HhcCcccccCCC
Q 047291           43 NHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIH----W-GQ-TPTVIVSSADMAKEMM-KTHDIIFSNRPK  115 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~----~-~~-~~~vvv~~p~~i~~i~-~~~~~~~~~~~~  115 (511)
                      +.+.||||+++|+.     +..+++..+.++ ++||+|++++    + ++ .++++|+||+++++|+ .++.  +.+++.
T Consensus         8 ~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~--~~~~~~   79 (406)
T 1ued_A            8 VAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEH--FTTRPQ   79 (406)
T ss_dssp             CCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSS--EECCCC
T ss_pred             CCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcc--cccccc
Confidence            45678999999986     567889999999 9999999999    6 78 8999999999999999 5432  444332


Q ss_pred             ccchh-hhc--cCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHH-
Q 047291          116 TTAAD-IFL--YGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLT-  191 (511)
Q Consensus       116 ~~~~~-~~~--~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~-  191 (511)
                      ..... ...  ....+.++..+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+..   +++++|+.+++.. 
T Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~  155 (406)
T 1ued_A           80 FTQSKSGAHVEAQFVGQISTYDPPEHTRLRKM-LTPEFTVRRIRRMEPAIQSLIDDRLDLLEA---EGPSADLQGLFADP  155 (406)
T ss_dssp             C---------CGGGTTCGGGCCTTHHHHHHHH-HGGGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCTTEEHHHHTHHH
T ss_pred             ccccccccccccccccccccCCCHHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHH
Confidence            11100 010  001123456689999999999 578999999999999999999999999975   3568999998875 


Q ss_pred             HHHHhhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 047291          192 VTNDTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLER  271 (511)
Q Consensus       192 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (511)
                      +++++++ .+||.+..+.+.+......+..    ..               ...+...++.+.+.+++.+.++++++.  
T Consensus       156 ~~~~vi~-~~~G~~~~~~~~~~~~~~~~~~----~~---------------~~~~~~~~~~~~~~~~~~~~i~~r~~~--  213 (406)
T 1ued_A          156 VGAHALC-ELLGIPRDDQREFVRRIRRNAD----LS---------------RGLKARAADSAAFNRYLDNLLARQRAD--  213 (406)
T ss_dssp             HHHHHHH-HHHTCCHHHHHHHHHHHHHCC----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             hHHHHHH-HHcCCCHHHHHHHHHHHHHHHh----cc---------------CCHHHHHHHHHHHHHHHHHHHHHHHhC--
Confidence            9999999 5799876433333333222111    00               012345677788889999999988753  


Q ss_pred             CCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCC
Q 047291          272 PDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKL  351 (511)
Q Consensus       272 ~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  351 (511)
                           ..+|+++.|+++. .    ..++++++.+++..+++||+|||+++++|++++|++||++|+||++|++       
T Consensus       214 -----~~~d~l~~ll~~~-~----~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------  276 (406)
T 1ued_A          214 -----PDDGLLGMIVRDH-G----DNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE-------  276 (406)
T ss_dssp             -----CCSSHHHHHHHHH-G----GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH-------
T ss_pred             -----CCCCHHHHHHHhc-C----CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH-------
Confidence                 2368999999764 1    3599999999999999999999999999999999999999999999853       


Q ss_pred             cCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCC
Q 047291          352 KVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNN  431 (511)
Q Consensus       352 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  431 (511)
                                 |++|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||   
T Consensus       277 -----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~---  342 (406)
T 1ued_A          277 -----------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA---  342 (406)
T ss_dssp             -----------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC---
T ss_pred             -----------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCC---
Confidence                       699999999999999997667999999999999999999999999999999999999999999998   


Q ss_pred             CCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEE
Q 047291          432 PVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLV  505 (511)
Q Consensus       432 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (511)
                             +..++|||+|+|.|+|++||++|++++++.|+++| ++++..+.  +++.+.  .+.+.++ ..+.|+
T Consensus       343 -------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~--~~~~~~~-~~lpv~  405 (406)
T 1ued_A          343 -------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPI--EEVKYR--SAFVDCP-DQVPVT  405 (406)
T ss_dssp             -------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCBC--CSSSCCB-SCCEEE
T ss_pred             -------CCCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCc--cccccc--ccccccC-Ceeeee
Confidence                   13689999999999999999999999999999999 79986432  223333  3334456 666664


No 31 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=2.5e-62  Score=473.21  Aligned_cols=405  Identities=17%  Similarity=0.197  Sum_probs=318.5

Q ss_pred             CCCCCCCCcccccccCCCCCcHHHHHHHHhh-CCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc-hhhhcc
Q 047291           47 PPCPPKLPIIGNLHQLGNLPHRSLRALSKKY-GPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA-ADIFLY  124 (511)
Q Consensus        47 ~pgp~~~p~iG~~~~~~~~~~~~~~~~~~ky-G~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~  124 (511)
                      ||||   |++||+..+..+++.++.+++++| |||+++.+++.+.+++++|++++ ++.++ ..|+....... ......
T Consensus         4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~   78 (415)
T 3awm_A            4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLL   78 (415)
T ss_dssp             --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTS
T ss_pred             CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhcc
Confidence            6666   899999988788999999999999 79999998888999999999987 66544 34544322211 101111


Q ss_pred             CCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhccc
Q 047291          125 GCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGK  204 (511)
Q Consensus       125 ~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~  204 (511)
                       +.+.+++.+++.|+++|+. +.+.|+++.++.+.+.+.+.++++++.|.+    ++++|+.+++..+++++++.+ ||.
T Consensus        79 -g~~~l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~-~G~  151 (415)
T 3awm_A           79 -GQGGVQGLDGETHRHRKQM-FMGLMTPERVRALAQLFEAEWRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW-AGV  151 (415)
T ss_dssp             -CSSSGGGCCHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-HTC
T ss_pred             -CCcceeecCcHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-cCC
Confidence             2234566789999999999 689999999999999999999999999975    358999999999999999999 799


Q ss_pred             cccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHH
Q 047291          205 KANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDI  284 (511)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  284 (511)
                      ++++. ++......+......+.      .+      ........++.+.+.+++.++|+++++...   ....+|+++.
T Consensus       152 ~~~~~-~~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~~d~l~~  215 (415)
T 3awm_A          152 PLPDD-EAGNRAGELRALFDAAG------SA------SPRHLWSRLARRRVDAWAKRIIEGIRAGSI---GSGSGTAAYA  215 (415)
T ss_dssp             CCCGG-GHHHHHHHHHHHHHSTT------CS------SHHHHHHHHHHHHHHHHHHHHHHHHHHTSS---CCCTTSHHHH
T ss_pred             CCCcc-hHHHHHHHHHHHHHHhc------cc------CchHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCCCCHHHH
Confidence            87653 33333333332222111      00      011233567778889999999998876431   1234689999


Q ss_pred             HHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhH
Q 047291          285 LLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYL  364 (511)
Q Consensus       285 ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l  364 (511)
                      |+++..+++  ..++++++..++..+ +||++||+++++|++++|++||++|++|++|                  +||+
T Consensus       216 ll~~~~~~g--~~~~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e------------------~~~l  274 (415)
T 3awm_A          216 IAWHRDRHD--DLLSPHVAAVELVNV-LRPTVAIAVYITFVAHALQTCSGIRAALVQQ------------------PDYA  274 (415)
T ss_dssp             HHHCBCTTS--CBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC------------------TTHH
T ss_pred             HHhhhhccC--CCCCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHhChHHHHHHHHH------------------HHHH
Confidence            998654322  358888888777755 4999999999999999999999999999996                  6999


Q ss_pred             HHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceee
Q 047291          365 KCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIP  444 (511)
Q Consensus       365 ~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~  444 (511)
                      +|||+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|||+||++.+    ..+..++|
T Consensus       275 ~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~----~~~~~~~~  349 (415)
T 3awm_A          275 ELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD----EDSFNFIP  349 (415)
T ss_dssp             HHHHHHHHHHSCCSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCC----CCSSSCCT
T ss_pred             HHHHHHHhhcCCCccc-cceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCC----CCCCCccC
Confidence            9999999999999998 469999999999999999999999999999999999999999999999753    14568999


Q ss_pred             cCCC----CCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          445 FGAG----RRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       445 Fg~G----~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ||+|    +|.|+|++||++|++++++.|+++|+++++++.    ..+. ...++..|++++.+++++.+
T Consensus       350 FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~----~~~~-~~~~~~~p~~~~~~~~~~~~  414 (415)
T 3awm_A          350 QGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD----LSID-FARLPALPKSGFVMRNVHIG  414 (415)
T ss_dssp             TCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCC----CCBC-TTSSSCCBTTCCEEEEEESC
T ss_pred             CCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCC----CCcC-cCCCccccCCCceEEEEeCC
Confidence            9999    599999999999999999999999999986542    2222 23456789999999998764


No 32 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=5.7e-64  Score=479.80  Aligned_cols=383  Identities=20%  Similarity=0.280  Sum_probs=302.2

Q ss_pred             CCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCC-CccchhhhccCCc
Q 047291           49 CPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRP-KTTAADIFLYGCI  127 (511)
Q Consensus        49 gp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~-~~~~~~~~~~~~~  127 (511)
                      ++..+|++||+..+..+++.++.+++++||+|++ ++++.++++|+||+++++|+.++  .|++++ .........  + 
T Consensus         3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g-   76 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--G-   76 (389)
T ss_dssp             ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--C-
T ss_pred             ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--C-
Confidence            3456899999988867789999999999999999 88988999999999999999866  566554 221121111  2 


Q ss_pred             eeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhcccccc
Q 047291          128 DIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGKKAN  207 (511)
Q Consensus       128 ~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~  207 (511)
                      ..+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.     ++++|+.+++..+++++++.++||.+++
T Consensus        77 ~~l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~fG~~~~  150 (389)
T 1n97_A           77 RGLLTDWGESWKEARKA-LKDPFLPKNVRGYREAMEEEARAFFGEWR-----GEERDLDHEMLALSLRLLGRALFGKPLS  150 (389)
T ss_dssp             SSTTTCCHHHHHHHHHH-HCGGGSHHHHHTTHHHHHHHHHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             CccccCCcHHHHHHHHH-hCcccCHHHHHHHHHHHHHHHHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHcCCcch
Confidence            23455689999999999 58899999999999999999999998875     4689999999999999999999999987


Q ss_pred             chhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHH
Q 047291          208 EESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQ  287 (511)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~  287 (511)
                      +  ++......+...... .   .++.+.|++.  ...++..++.+.+.+++.+.++++                  ++ 
T Consensus       151 ~--~~~~~~~~~~~~~~~-~---~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~i~~r------------------ll-  203 (389)
T 1n97_A          151 P--SLAEHALKALDRIMA-Q---TRSPLALLDL--AAEARFRKDRGALYREAEALIVHP------------------PL-  203 (389)
T ss_dssp             H--HHHHHHHHHHHHHHH-H---HHCGGGGGCH--HHHHHHHHHHHHHHHHHGGGTTST------------------TG-
T ss_pred             H--HHHHHHHHHHHHHHH-H---HhhHHHhcCC--chhHHHHHHHHHHHHHHHHHHHHH------------------hc-
Confidence            2  454444444332210 0   1111122210  011223333334443333332211                  22 


Q ss_pred             hccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHH
Q 047291          288 VQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCV  367 (511)
Q Consensus       288 ~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~  367 (511)
                              ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+.                  ||
T Consensus       204 --------~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------------------a~  257 (389)
T 1n97_A          204 --------SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AA  257 (389)
T ss_dssp             --------GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------------------HH
T ss_pred             --------ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------------------HH
Confidence                    1488999999999999999999999999999999999999999999998764                  99


Q ss_pred             HhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCC
Q 047291          368 IKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGA  447 (511)
Q Consensus       368 i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~  447 (511)
                      |+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++|+|  +|+||++||||||++++   ...+..++|||+
T Consensus       258 i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~---~~~~~~~~~FG~  331 (389)
T 1n97_A          258 FQEALRLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER---GTPSGRYFPFGL  331 (389)
T ss_dssp             HHHHHHHSCSSCCE-EEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC---CCCBTTBCTTCC
T ss_pred             HHHHHhcCCCcccc-ceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC---CCCCCCccCCCC
Confidence            99999999999986 7999999999999999999999999999999  99999999999998641   124568999999


Q ss_pred             CCCCCCCchHHHHHHHHHHHHhHhhcccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          448 GRRGCPGTLFGVTSAEGVVANLLYWFDWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       448 G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      |+|.|+|++||.+|++++++.|+++|++++.++..   .    ..+.+..|+.++.+++++|
T Consensus       332 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~----~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          332 GQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR---V----LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             STTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCC---E----EESSSEEETTCCEECCBC-
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCc---c----cceEEeeeCCCceEEEeec
Confidence            99999999999999999999999999999875532   1    3466678888888888776


No 33 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=8.9e-61  Score=460.71  Aligned_cols=370  Identities=16%  Similarity=0.229  Sum_probs=300.3

Q ss_pred             CCCCCCCCCCcccccccCCCCCcHHHHHHHHhh-CCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhh
Q 047291           45 NLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKY-GPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIF  122 (511)
Q Consensus        45 ~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~ky-G~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~  122 (511)
                      ..+|+|+++|.+.....+..+++..+.++ ++| |+|+++++ ++.+.++|+||+++++|+.++.  +++++....+...
T Consensus         5 ~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~   81 (412)
T 2zbx_A            5 ATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPAT   81 (412)
T ss_dssp             ---CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCCC
T ss_pred             CCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCccccccccc
Confidence            45778777886643345678899999999 788 99999997 8899999999999999998643  3333221111100


Q ss_pred             ------ccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHH-HHHH
Q 047291          123 ------LYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLT-VTND  195 (511)
Q Consensus       123 ------~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~-~~~~  195 (511)
                            .....+.+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+..   +++++|+.+++.. ++++
T Consensus        82 ~~~~~~~~~~~~~l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~  157 (412)
T 2zbx_A           82 SPRFEAVRESPQAFIGLDPPEHGTRRRM-TISEFTVKRIKGMRPEVEEVVHGFLDEMLA---AGPTADLVSQFALPVPSM  157 (412)
T ss_dssp             SGGGC----CCCCGGGCCTTHHHHHHTT-TGGGGSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHH
T ss_pred             ccccccccccccccccCCcHHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHH
Confidence                  0001123556689999999999 678899999999999999999999999975   2568999998874 8899


Q ss_pred             hhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 047291          196 TVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDK  275 (511)
Q Consensus       196 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  275 (511)
                      +++. +||.+.++.+.+......+...         .          .. +...++.+.+.+++.+.++++++.      
T Consensus       158 vi~~-~~G~~~~~~~~~~~~~~~~~~~---------~----------~~-~~~~~~~~~~~~~~~~~i~~r~~~------  210 (412)
T 2zbx_A          158 VICR-LLGVPYADHEFFQDASKRLVQS---------T----------DA-QSALTARNDLAGYLDGLITQFQTE------  210 (412)
T ss_dssp             HHHH-HHTCCGGGHHHHHHHHHHHHHC---------S----------SH-HHHHHHHHHHHHHHHHHHHHHHHS------
T ss_pred             HHHH-HcCCCHHHHHHHHHHHHHHhcc---------C----------cH-HHHHHHHHHHHHHHHHHHHHHHhC------
Confidence            9996 7999876544555444433210         0          11 345667788889999999988753      


Q ss_pred             cccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCc
Q 047291          276 SVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEA  355 (511)
Q Consensus       276 ~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~  355 (511)
                       ..+|+++.|+++..+   ...++++++.+++..+++||+|||+++++|++++|++||++|+||++|+            
T Consensus       211 -~~~d~l~~ll~~~~~---~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------  274 (412)
T 2zbx_A          211 -PGAGLVGALVADQLA---NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR------------  274 (412)
T ss_dssp             -CCSSHHHHHHHTTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------
T ss_pred             -CCCCHHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------
Confidence             236899999987542   2469999999999999999999999999999999999999999999974            


Q ss_pred             ccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCC
Q 047291          356 SDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNF  435 (511)
Q Consensus       356 ~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~  435 (511)
                            .|++|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||       
T Consensus       275 ------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~-------  341 (412)
T 2zbx_A          275 ------SLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRS-------  341 (412)
T ss_dssp             ------GGHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC-------
T ss_pred             ------HhHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCC-------
Confidence                  3799999999999999997667999999999999999999999999999999999999999999997       


Q ss_pred             CCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCC
Q 047291          436 MGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGD  480 (511)
Q Consensus       436 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~  480 (511)
                         +..++|||+|+|.|+|++||++|++++++.|+++| ++++..+
T Consensus       342 ---~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~  384 (412)
T 2zbx_A          342 ---ARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVP  384 (412)
T ss_dssp             ---CTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             ---CCCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence               13589999999999999999999999999999999 7998653


No 34 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=2.2e-61  Score=467.72  Aligned_cols=382  Identities=17%  Similarity=0.232  Sum_probs=299.4

Q ss_pred             CCCCCCCCCCCCcccccccCC-----CCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCCC-
Q 047291           43 NHNLPPCPPKLPIIGNLHQLG-----NLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRPK-  115 (511)
Q Consensus        43 ~~~~~pgp~~~p~iG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~-  115 (511)
                      +.+.|||     ++|++.+..     .+++..+.++++ ||||++++. |+.+.++|+++++++++++++ ..|+.++. 
T Consensus         4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~   76 (428)
T 1cpt_A            4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS   76 (428)
T ss_dssp             TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred             ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence            4567777     889865542     357788888876 799999998 678999999999999999754 45766654 


Q ss_pred             ccch---h-h-h--ccC----CceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCcee
Q 047291          116 TTAA---D-I-F--LYG----CIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVN  184 (511)
Q Consensus       116 ~~~~---~-~-~--~~~----~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd  184 (511)
                      ....   . . +  ..|    ....+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++.+++.+.+.   ++++|
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---~~~~d  152 (428)
T 1cpt_A           77 EILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGL-TLNWFQPASIRKLEENIRRIAQASVQRLLDF---DGECD  152 (428)
T ss_dssp             SSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHH-HHTTSSHHHHGGGHHHHHHHHHHHHHHHHTS---SSEEE
T ss_pred             ccCCcccccchhccccccccccccccccCChHHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHHHHh---CCCee
Confidence            2211   1 1 1  011    1234566689999999999 5889999999999999999999999998752   35799


Q ss_pred             HHHH-HHHHHHHhhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHH
Q 047291          185 LSEM-LLTVTNDTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVI  263 (511)
Q Consensus       185 l~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i  263 (511)
                      +.+. ...+++++++.+ ||.+.++.+.+......+.....  .....+|++.++.  ....++..++.+.+.+++.+.|
T Consensus       153 ~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~--~~~~~~~~~~~~~~~~~~~~~i  227 (428)
T 1cpt_A          153 FMTDCALYYPLHVVMTA-LGVPEDDEPLMLKLTQDFFGVHE--PDEQAVAAPRQSA--DEAARRFHETIATFYDYFNGFT  227 (428)
T ss_dssp             HHHHTTTTHHHHHHHHH-HTCCGGGHHHHHHHHHTTTCC--------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHhhhHHHHHHHH-cCCCHhHHHHHHHHHHHHHhccc--ccccccccccccc--hhhHHHHHHHHHHHHHHHHHHH
Confidence            9855 467999999999 99987654444443322211100  0111233332210  1222456677888899999999


Q ss_pred             HHHHhccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHH
Q 047291          264 AEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEV  343 (511)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  343 (511)
                      +++++.       ..+|+++.|+++..+   ...++++++.+++..+++||+|||+++++|++++|++||++|+||++|+
T Consensus       228 ~~r~~~-------~~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~  297 (428)
T 1cpt_A          228 VDRRSC-------PKDDVMSLLANSKLD---GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDP  297 (428)
T ss_dssp             HHHTTS-------CCSSHHHHHHHCBSS---SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG
T ss_pred             HHHHcC-------CCCcHHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhH
Confidence            888742       246899999987542   2369999999999999999999999999999999999999999999995


Q ss_pred             HHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCC
Q 047291          344 RRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEF  423 (511)
Q Consensus       344 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  423 (511)
                      +                  |++|||+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++||||++|+||++|
T Consensus       298 ~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F  358 (428)
T 1cpt_A          298 A------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEF  358 (428)
T ss_dssp             G------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSC
T ss_pred             H------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhc
Confidence            3                  899999999999999986 579999999999999999999999999999999999999999


Q ss_pred             CCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcc-cccCC
Q 047291          424 IPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFD-WKLPG  479 (511)
Q Consensus       424 ~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~-~~~~~  479 (511)
                      +||||.+          .++|||+|+|.|+|++||++|++++++.|+++|+ +++.+
T Consensus       359 ~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  405 (428)
T 1cpt_A          359 DITRFPN----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG  405 (428)
T ss_dssp             CTTCCSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS
T ss_pred             CCCCCCC----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC
Confidence            9999951          3799999999999999999999999999999997 88763


No 35 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=1e-60  Score=458.93  Aligned_cols=381  Identities=15%  Similarity=0.226  Sum_probs=307.5

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCCC--c-cchhhhcc-CCceeEecCCc
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRPK--T-TAADIFLY-GCIDIAFSPYG  135 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~--~-~~~~~~~~-~~~~~~~~~~~  135 (511)
                      .+..+++..+.++ ++||+|+++++ ++.+.++|+||+++++|+.++  .|++++.  . ........ .....+++.+|
T Consensus        16 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   92 (403)
T 3aba_A           16 SCPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQDE   92 (403)
T ss_dssp             SSTTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCCT
T ss_pred             ccccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCCc
Confidence            3567899999999 89999999997 889999999999999999864  3555431  1 11100100 01233556789


Q ss_pred             hhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhHHH
Q 047291          136 EYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKFGT  214 (511)
Q Consensus       136 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~  214 (511)
                      +.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+   +++++|+..++ ..+++++++. +||.+.++.+.+..
T Consensus        93 ~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~  167 (403)
T 3aba_A           93 PEHTSDRKL-LAKEFTVRRMQALRPNIQRIVDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVERRAEFQD  167 (403)
T ss_dssp             THHHHHHHH-HHHHSCHHHHHTTHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHH
T ss_pred             hhHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHH
Confidence            999999999 578899999999999999999999999975   25689998776 4799999998 79998765444444


Q ss_pred             HHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccccc
Q 047291          215 ISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATT  294 (511)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  294 (511)
                      ....+...    .    .+           .+...++.+.+.+++.+.++++++.       ..+|+++.|+++..+   
T Consensus       168 ~~~~~~~~----~----~~-----------p~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~---  218 (403)
T 3aba_A          168 IAEAMMRV----D----QD-----------AAATEAAGMRLGGLLYQLVQERRAN-------PGDDLISALITTEDP---  218 (403)
T ss_dssp             HHHHHSBS----S----SC-----------HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTSCCT---
T ss_pred             HHHHHHhc----c----Cc-----------HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhccC---
Confidence            33322110    0    00           1345667788889999999988753       235899999987532   


Q ss_pred             ccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCC
Q 047291          295 KHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRL  374 (511)
Q Consensus       295 ~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  374 (511)
                      ...++++++.+++..+++||+|||+++++|++++|++||++|++|++|+                  .|++|||+|+||+
T Consensus       219 ~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl  280 (403)
T 3aba_A          219 DGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDP------------------SLVGNAVEELLRY  280 (403)
T ss_dssp             TCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHhc
Confidence            2369999999999999999999999999999999999999999999984                  3799999999999


Q ss_pred             CCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCC
Q 047291          375 HAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPG  454 (511)
Q Consensus       375 ~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G  454 (511)
                      +|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++||||||.          ..++|||+|+|.|+|
T Consensus       281 ~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C~G  350 (403)
T 3aba_A          281 LTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------APHLAFGFGAHQCIG  350 (403)
T ss_dssp             HCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------CCCSTTCCGGGSCTT
T ss_pred             CCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC----------CCccCCCCCCccCcC
Confidence            9999966679999999999999999999999999999999999999999999983          257999999999999


Q ss_pred             chHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          455 TLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       455 ~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ++||++|++++++.|+++| ++++.++.  .++.+.  .+...+....+.|++++|+
T Consensus       351 ~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~--~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          351 QQLARIELQIVFETLFRRLPGLRLAKPV--EELRFR--HDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEESSCG--GGSCBC--TTBSSCCBSCCEEECCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceecCCc--cccccc--cCcccCCcceeEEEecCCC
Confidence            9999999999999999999 59987542  222333  3445678889999998885


No 36 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=3.9e-61  Score=463.32  Aligned_cols=371  Identities=18%  Similarity=0.248  Sum_probs=293.3

Q ss_pred             HHHHhhCCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCC
Q 047291           35 LFKFIKGGNHNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRP  114 (511)
Q Consensus        35 ~~~~~~~~~~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~  114 (511)
                      +.+.+..++++.+|||+.          ..+++.++.++++ ||||   +.++.+.++|++|+++++|+.++ ..|++++
T Consensus         9 ~iyr~~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~   73 (411)
T 2jjn_A            9 CCARRTLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDP   73 (411)
T ss_dssp             --------CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCG
T ss_pred             HhhhcccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcc
Confidence            344455567888899872          2467888889875 9998   45667899999999999999864 3566654


Q ss_pred             CccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHH-HHHHH
Q 047291          115 KTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEM-LLTVT  193 (511)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~-~~~~~  193 (511)
                      ... ...... +.+.++..+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.      .++++|+.++ ...++
T Consensus        74 ~~~-~~~~~~-~~~~~~~~~g~~~~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~------~~~~~d~~~~~~~~~~  144 (411)
T 2jjn_A           74 TRV-IEGASP-TPGMIHEIDPPEHRALRKV-VSSAFTPRTISDLEPRIRDVTRSLLAD------AGESFDLVDVLAFPLP  144 (411)
T ss_dssp             GGG-STTCCC-CTTCGGGCCTTHHHHHHHH-HHHHSCHHHHHTTHHHHHHHHHHHHHT------SCSEEEHHHHTTTHHH
T ss_pred             ccc-CCcccc-cccccccCCchHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHhc------CCCceeHHHHHHHHHH
Confidence            321 111111 1234556689999999999 578999999999999999999999887      2458999955 46899


Q ss_pred             HHhhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047291          194 NDTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPD  273 (511)
Q Consensus       194 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  273 (511)
                      +++++.+ ||.+.++.+.+......+....        .|.+  +.  +...++..++.+.+.+++.+.++++++.    
T Consensus       145 ~~vi~~~-fG~~~~~~~~~~~~~~~~~~~~--------~~~~--~~--p~~~~~~~~~~~~~~~~~~~~i~~r~~~----  207 (411)
T 2jjn_A          145 VTIVAEL-LGLPPMDHEQFGDWSGALVDIQ--------MDDP--TD--PALAERIADVLNPLTAYLKARCAERRAD----  207 (411)
T ss_dssp             HHHHHHH-HTCCSCCCSTTCCHHHHHHHSC--------CSCT--TC--HHHHHHHHHHHHHHHHHHHHHHHHHHHS----
T ss_pred             HHHHHHH-cCCCHHHHHHHHHHHHHHHhcc--------Cccc--cc--hHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence            9999998 9998765544444444333221        1111  00  1122345677788889999999888752    


Q ss_pred             CccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcC
Q 047291          274 DKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKV  353 (511)
Q Consensus       274 ~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  353 (511)
                         ..+|+++.|+++..++   ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++         
T Consensus       208 ---~~~d~l~~ll~~~~~~---~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------  272 (411)
T 2jjn_A          208 ---PGDDLISRLVLAEVDG---RALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG---------  272 (411)
T ss_dssp             ---CCSSHHHHHHHCCBTT---BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG---------
T ss_pred             ---CCCCHHHHHHhcccCC---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------
Confidence               2468999999875422   3699999999999999999999999999999999999999999999953         


Q ss_pred             CcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCC
Q 047291          354 EASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPV  433 (511)
Q Consensus       354 ~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~  433 (511)
                               |++|||+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++||||||.+   
T Consensus       273 ---------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---  339 (411)
T 2jjn_A          273 ---------RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG---  339 (411)
T ss_dssp             ---------GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS---
T ss_pred             ---------hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC---
Confidence                     899999999999999996 6799999999999999999999999999999999999999999999753   


Q ss_pred             CCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcc-cccCC
Q 047291          434 NFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFD-WKLPG  479 (511)
Q Consensus       434 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~-~~~~~  479 (511)
                           ...++|||+|+|.|+|++||++|++++++.|+++|+ +++.+
T Consensus       340 -----~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  381 (411)
T 2jjn_A          340 -----GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDR  381 (411)
T ss_dssp             -----SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECC
T ss_pred             -----CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECC
Confidence                 135899999999999999999999999999999996 99874


No 37 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=2.6e-60  Score=456.64  Aligned_cols=380  Identities=19%  Similarity=0.233  Sum_probs=306.9

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCcc-c----hhhhccCCceeEecCCc
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTT-A----ADIFLYGCIDIAFSPYG  135 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~  135 (511)
                      .+..+++.++.++ ++||+|+++++++.+.++|++|+++++|+.++.  |++++... .    .......+ ..++..+|
T Consensus        17 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~-~~l~~~~g   92 (411)
T 3a4g_A           17 TFWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPT-PMMILMDP   92 (411)
T ss_dssp             GGTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSS-CCGGGCCT
T ss_pred             hhhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccc-cccccCCc
Confidence            3567899999999 899999999999999999999999999998653  65554321 0    01111112 33556689


Q ss_pred             hhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHH-HHHHHHHhhhhhhccccccchhhHHH
Q 047291          136 EYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEM-LLTVTNDTVGRCVFGKKANEESKFGT  214 (511)
Q Consensus       136 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~  214 (511)
                      +.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+    ++++|+... ...+++++++.+ ||.+.++.+.+..
T Consensus        93 ~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~  166 (411)
T 3a4g_A           93 PDHTRLRKL-VGRSFTVRRMNELEPRITEIADGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAEDRDDFSA  166 (411)
T ss_dssp             THHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGGHHHHHH
T ss_pred             hHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHHHHHHHHH
Confidence            999999999 578999999999999999999999998864    357999755 568999999975 9998765444544


Q ss_pred             HHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccccc
Q 047291          215 ISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATT  294 (511)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  294 (511)
                      ....+...         .|         .  .+..++.+.+.+++.+.++++++.       ..+|+++.|+++..++  
T Consensus       167 ~~~~~~~~---------~p---------~--~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~~--  217 (411)
T 3a4g_A          167 WSSVLVDD---------SP---------A--DDKNAAMGKLHGYLSDLLERKRTE-------PDDALLSSLLAVSDED--  217 (411)
T ss_dssp             HHHHHTTS---------SC---------T--TTHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCCTT--
T ss_pred             HHHHHhcc---------CC---------H--HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhccC--
Confidence            43322110         11         0  134567778889999999988753       2368999999875422  


Q ss_pred             ccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCC
Q 047291          295 KHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRL  374 (511)
Q Consensus       295 ~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  374 (511)
                      ...++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                  .|++|||+|+||+
T Consensus       218 ~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl  279 (411)
T 3a4g_A          218 GDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDP------------------SLISSAVEEFLRF  279 (411)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCH------------------HHHHHHHHHHHHh
Confidence            2369999999999999999999999999999999999999999999984                  3899999999999


Q ss_pred             CCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCC
Q 047291          375 HAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPG  454 (511)
Q Consensus       375 ~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G  454 (511)
                      +|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|+||.          ..++|||+|+|.|+|
T Consensus       280 ~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G  349 (411)
T 3a4g_A          280 DSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA----------SGGVFFGHGIHFCLG  349 (411)
T ss_dssp             TCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCSTTCCTT
T ss_pred             cccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC----------CCCCCCCCCCccCCC
Confidence            9999966679999999999999999999999999999999999999999999973          257999999999999


Q ss_pred             chHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccCC
Q 047291          455 TLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYSA  511 (511)
Q Consensus       455 ~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  511 (511)
                      ++||++|++++++.|+++| ++++.++.  +++.+..  +.+.+....+.|++++|++
T Consensus       350 ~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~~--~~~~~~~~~lpv~~~~r~~  403 (411)
T 3a4g_A          350 AQLARLEGRVAIGRLFADRPELALAVGL--DELVYRE--STLVRGLSRMPVTMGPRSA  403 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCBCC--CTTBCCBSCCEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcEECCCc--ccccccc--CccccCcceeEEEecCcch
Confidence            9999999999999999999 69987532  2233333  3345677788888888764


No 38 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.3e-60  Score=459.22  Aligned_cols=384  Identities=20%  Similarity=0.285  Sum_probs=303.8

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCC--ccchhhhc-----cC--CceeEe
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPK--TTAADIFL-----YG--CIDIAF  131 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~--~~~~~~~~-----~~--~~~~~~  131 (511)
                      .+..+++..+.++ ++||+|+++++++.+.++|+||+++++|+.++.  ++..+.  +.......     .+  +.+.++
T Consensus        12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   88 (408)
T 1odo_A           12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF   88 (408)
T ss_dssp             TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred             cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc
Confidence            4567899999999 999999999988889999999999999997653  222211  11000000     00  113456


Q ss_pred             cCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHH-HHHHHhhhhhhccccccchh
Q 047291          132 SPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLL-TVTNDTVGRCVFGKKANEES  210 (511)
Q Consensus       132 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~  210 (511)
                      +.+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+.+. .+++++|+.+++. .+++++++. +||.+.++.+
T Consensus        89 ~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~  165 (408)
T 1odo_A           89 TAYGPNHRKLRRL-VAPAFSARRVDAMRPAVEAMVTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQDRRD  165 (408)
T ss_dssp             GCCHHHHHHHHHT-TGGGGSHHHHHHHHHHHHHHHHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHHHH
T ss_pred             ccCChHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHHHHH
Confidence            6789999999999 6789999999999999999999999999764 2357899999887 599999996 7999765444


Q ss_pred             hHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcc
Q 047291          211 KFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQK  290 (511)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~  290 (511)
                      .+......+...    .               ....+..++.+.+.+++.++++++++.       ..+|+++.|+++..
T Consensus       166 ~~~~~~~~~~~~----~---------------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~  219 (408)
T 1odo_A          166 GFRALVDGVFDT----T---------------LDQAEAQANTARLYEVLDQLIAAKRAT-------PGDDMTSLLIAARD  219 (408)
T ss_dssp             HHHHHHHHHHCT----T---------------CCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHHC
T ss_pred             HHHHHHHHHhcc----c---------------CCHHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCHHHHHHHhcc
Confidence            444443332210    0               011345667788889999999888753       23689999998754


Q ss_pred             ccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhh
Q 047291          291 DATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKE  370 (511)
Q Consensus       291 ~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  370 (511)
                      ++.....++++++.+++..+++||+|||+++++|++++|++||++|+||++|+                  +|++|||+|
T Consensus       220 ~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E  281 (408)
T 1odo_A          220 DEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE------------------VTWADVVEE  281 (408)
T ss_dssp             C-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS------------------SCHHHHHHH
T ss_pred             cccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHH
Confidence            32112469999999999999999999999999999999999999999999972                  369999999


Q ss_pred             hcCCCCCCccccccccCCcceec-CeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCC
Q 047291          371 SLRLHAPAPLLVHRETSSSVKMG-GYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGR  449 (511)
Q Consensus       371 ~lRl~~~~~~~~~R~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~  449 (511)
                      +||++|+++...+|.+.+|++++ ||.||||+.|+++.+++||||++|+||++|+||||          +..++|||+|+
T Consensus       282 ~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~pFG~G~  351 (408)
T 1odo_A          282 TLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT----------VKEHLAFGHGV  351 (408)
T ss_dssp             HHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS----------CCCCCTTCSST
T ss_pred             HHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC----------CCCCCCCCCCC
Confidence            99999999976679999999999 99999999999999999999999999999999993          23689999999


Q ss_pred             CCCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeec
Q 047291          450 RGCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVM  508 (511)
Q Consensus       450 r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (511)
                      |.|+|++||++|++++++.|+++| ++++..+.  .++.+.  .+.+.++...+.|++++
T Consensus       352 r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~--~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          352 HFCLGAPLARMEVTLALESLFGRFPDLRLADPA--EELPPV--PSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             TSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTT--SCCCBC--SCSSBCCBSCCEEECC-
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhCCcceecCCc--cccccc--cCccccCcccceEEecC
Confidence            999999999999999999999999 79986432  223332  34456777888887764


No 39 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=6.8e-61  Score=461.21  Aligned_cols=380  Identities=16%  Similarity=0.251  Sum_probs=302.6

Q ss_pred             ccCCCCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCCCccchhh---hcc---CCceeEec
Q 047291           60 HQLGNLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADI---FLY---GCIDIAFS  132 (511)
Q Consensus        60 ~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~  132 (511)
                      ..+..+++..+.++ ++||+|+++++ ++.+.++|+||+++++|+.++.  +.+++....+..   ...   ...+.+++
T Consensus        20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (408)
T 3abb_A           20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIG   96 (408)
T ss_dssp             CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTT
T ss_pred             cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCcccccccccccc
Confidence            34567899999999 89999999997 8889999999999999997643  333321001100   000   01123556


Q ss_pred             CCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHH-HHHHHhhhhhhccccccchhh
Q 047291          133 PYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLL-TVTNDTVGRCVFGKKANEESK  211 (511)
Q Consensus       133 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~  211 (511)
                      .+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+..   +++++|+.+++. .+++++++. +||.+.++.+.
T Consensus        97 ~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~  171 (408)
T 3abb_A           97 VDDPVHARQRRM-LIPSFGVKRMNAIRPRLQSLVDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYGDHDF  171 (408)
T ss_dssp             CCTTHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHH
T ss_pred             CCchHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHHHHH
Confidence            689999999999 578999999999999999999999999975   356899999886 488999997 79998765444


Q ss_pred             HHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccc
Q 047291          212 FGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKD  291 (511)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~  291 (511)
                      +......+...      .   +         .  +...++.+.+.+++.+.++++++.       ..+|+++.|+++..+
T Consensus       172 ~~~~~~~~~~~------~---~---------~--~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~  224 (408)
T 3abb_A          172 FEECSRNFVGA------A---T---------S--AEADAAFGELYTYLHGLVGRKQAE-------PEDGLLDELIARQLE  224 (408)
T ss_dssp             HHHHHHHHC--------------------------CCSSHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHHHT
T ss_pred             HHHHHHHHhcc------c---c---------h--HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhcccC
Confidence            54443322110      0   0         0  112345667788888888888753       236899999987542


Q ss_pred             cccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhh
Q 047291          292 ATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKES  371 (511)
Q Consensus       292 ~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~  371 (511)
                         ...++++++.+++..+++||+|||+++++|++++|++||++|++|++|+                  .|++|||+|+
T Consensus       225 ---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~  283 (408)
T 3abb_A          225 ---EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDP------------------GAVSGVVEEL  283 (408)
T ss_dssp             ---SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCH------------------HHHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HhHHHHHHHH
Confidence               2369999999999999999999999999999999999999999999874                  3799999999


Q ss_pred             cCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCC
Q 047291          372 LRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRG  451 (511)
Q Consensus       372 lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~  451 (511)
                      ||++|+++ ..+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||          +..++|||+|+|.
T Consensus       284 lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~~FG~G~r~  352 (408)
T 3abb_A          284 LRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN----------ARHHVGFGHGIHQ  352 (408)
T ss_dssp             HHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC----------CTTCCTTCCGGGC
T ss_pred             HHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC----------CCCCCCCCCCCcC
Confidence            99999999 567999999999999999999999999999999999999999999996          2358999999999


Q ss_pred             CCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          452 CPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       452 C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      |+|++||++|++++++.|+++| ++++..+.  +++.+..  +.+.+....+.|++++|+
T Consensus       353 C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~--~~~~~~~~~lpv~~~~~~  408 (408)
T 3abb_A          353 CLGQNLARAELEIALGGLFARIPGLRLAVPL--DEVPIKA--GHDAQGPIELPVVWHHHH  408 (408)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGSCBCC--TTSCCSBSCCEEECSCCC
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCccceecCCc--ccccccc--CcccCCcceeEEEeCCCC
Confidence            9999999999999999999999 89986432  2233332  344567788888888875


No 40 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=1e-60  Score=459.70  Aligned_cols=392  Identities=16%  Similarity=0.139  Sum_probs=311.0

Q ss_pred             CCCCCCCCCCCCCCcc--ccccc-----CCCCCcHHHHHHHHhhC--CcEEEeecCcCEEEecCHHHHHHHHHhcCcccc
Q 047291           41 GGNHNLPPCPPKLPII--GNLHQ-----LGNLPHRSLRALSKKYG--PLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFS  111 (511)
Q Consensus        41 ~~~~~~~pgp~~~p~i--G~~~~-----~~~~~~~~~~~~~~kyG--~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~  111 (511)
                      ..+.+.||||...|..  +.+-.     +..+++.++.+++ +||  +||++.+.| +.++|+||+++++|+.+ ...|+
T Consensus         7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f~   83 (415)
T 2zwu_A            7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHFS   83 (415)
T ss_dssp             ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTEE
T ss_pred             cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccccC
Confidence            4567889999998875  43211     2346788898985 899  999998433 68999999999999974 44566


Q ss_pred             cCC-CccchhhhccCCcee-EecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH
Q 047291          112 NRP-KTTAADIFLYGCIDI-AFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML  189 (511)
Q Consensus       112 ~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~  189 (511)
                      +++ ...... ... + .. ++..+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+.+.    +++|+.+++
T Consensus        84 ~~~~~~~~~~-~~~-~-~~~l~~~~g~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~----~~~d~~~~~  155 (415)
T 2zwu_A           84 SECPFIPREA-GEA-Y-DFIPTSMDPPEQRQFRAL-ANQVVGMPVVDKLENRIQELACSLIESLRPQ----GQCNFTEDY  155 (415)
T ss_dssp             TTSCSSSHHH-HHH-C-CCTTTTCCTTTTHHHHHH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHGGG----TEEEHHHHT
T ss_pred             CCcccCCCCc-ccc-c-cccCccCCCcHHHHHHHH-HHhhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccHHHHH
Confidence            664 222111 111 2 23 456679999999999 5789999999999999999999999998752    379999865


Q ss_pred             -HHHHHHhhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHh
Q 047291          190 -LTVTNDTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRN  268 (511)
Q Consensus       190 -~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  268 (511)
                       +.+++++++.+ ||.++++.+.+......+...        ..|.            +..++.+.+.+++.+.++++++
T Consensus       156 ~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~--------~~P~------------~~~~~~~~~~~~~~~~i~~r~~  214 (415)
T 2zwu_A          156 AEPFPIRIFMLL-AGLPEEDIPHLKYLTDQMTRP--------DGSM------------TFAEAKEALYDYLIPIIEQRRQ  214 (415)
T ss_dssp             TTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHHSC--------CSSS------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhc--------cCHH------------HHHHHHHHHHHHHHHHHHHHHh
Confidence             78999999999 999887655555544433221        0121            3456777888899999998875


Q ss_pred             ccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhc
Q 047291          269 LERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVG  348 (511)
Q Consensus       269 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  348 (511)
                      .       ...|+++.|++...+   ...++++++..++..+++||+|||+.+++|++++|++||++|+++++|++    
T Consensus       215 ~-------~~~dll~~ll~~~~~---~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~----  280 (415)
T 2zwu_A          215 K-------PGTDAISIVANGQVN---GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE----  280 (415)
T ss_dssp             S-------CCSSHHHHHHTCEET---TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG----
T ss_pred             C-------CCCCHHHHHHHhhhc---CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH----
Confidence            3       246899999976432   23599999999999999999999999999999999999999999999942    


Q ss_pred             CCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCc
Q 047291          349 KKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERF  428 (511)
Q Consensus       349 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~  428 (511)
                                    |++|||+|+||++|+++. . |.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||
T Consensus       281 --------------~l~a~i~E~lRl~p~~~~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~  344 (415)
T 2zwu_A          281 --------------RIPAACEELLRRFSLVAD-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQ  344 (415)
T ss_dssp             --------------GHHHHHHHHHHHTCCBCC-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCS
T ss_pred             --------------HHHHHHHHHHhhcCCcCC-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCCC
Confidence                          899999999999999995 6 999999999999999999999999999999999999999999995


Q ss_pred             CCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcc-cccCCCCCCCCCCCccccCceecccCceeEEee
Q 047291          429 YNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFD-WKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPV  507 (511)
Q Consensus       429 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (511)
                      -          ..++|||+|+|.|+|++||.+|++++++.|+++|+ +++.++.     .+. ..+.+......+.|+++
T Consensus       345 ~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~-~~~~~~~~~~~lpv~~~  408 (415)
T 2zwu_A          345 K----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGA-----QIQ-HKSGIVSGVQALPLVWD  408 (415)
T ss_dssp             S----------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTC-----CCC-EECSSBCEESCCEEECC
T ss_pred             C----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCc-----ccc-cCCccccCcceeEEEEe
Confidence            1          35799999999999999999999999999999998 9987531     231 12334456667777777


Q ss_pred             ccC
Q 047291          508 MYS  510 (511)
Q Consensus       508 ~r~  510 (511)
                      +|+
T Consensus       409 ~r~  411 (415)
T 2zwu_A          409 PAT  411 (415)
T ss_dssp             GGG
T ss_pred             cCC
Confidence            764


No 41 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=4.2e-60  Score=455.09  Aligned_cols=388  Identities=17%  Similarity=0.224  Sum_probs=306.5

Q ss_pred             CCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEee-cCcC-EEEecCHHHHHHHHHhcCcccccCCCccchhh-
Q 047291           45 NLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHW-GQTP-TVIVSSADMAKEMMKTHDIIFSNRPKTTAADI-  121 (511)
Q Consensus        45 ~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~-~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~-  121 (511)
                      +.+|+|+.+|+.++   ...+++.++.+++ +||+|+++.+ +|.+ .++|+||+++++|+.++  .|++++....... 
T Consensus         8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~   81 (406)
T 1s1f_A            8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQVTR   81 (406)
T ss_dssp             CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTBCB
T ss_pred             hhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCccc
Confidence            56778777888766   5578999999885 7999999996 6777 99999999999999853  4655543211110 


Q ss_pred             h---ccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhh
Q 047291          122 F---LYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTV  197 (511)
Q Consensus       122 ~---~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~  197 (511)
                      .   ..+....+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+   +++++|+.+++ ..++++++
T Consensus        82 ~~~~~~~~~~~l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi  157 (406)
T 1s1f_A           82 LAPHFIPARGAVGFLDPPDHTRLRRS-VAAAFTARGVERVRERSRGMLDELVDAMLR---AGPPADLTEAVLSPFPIAVI  157 (406)
T ss_dssp             SSSSCSSCTTSGGGCCTTHHHHHHHH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTHHHHHHH
T ss_pred             ccccccccccccccCCchHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHhhHhHHHHH
Confidence            0   1111233456689999999999 578899999999999999999999999974   24689998776 47999999


Q ss_pred             hhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 047291          198 GRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSV  277 (511)
Q Consensus       198 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  277 (511)
                      +. +||.+.++.+.+......+.....        |           .+...++.+.+.+++.+.++++++.       .
T Consensus       158 ~~-~~G~~~~~~~~~~~~~~~~~~~~~--------~-----------~~~~~~~~~~~~~~~~~~i~~r~~~-------~  210 (406)
T 1s1f_A          158 CE-LMGVPATDRHSMHTWTQLILSSSH--------G-----------AEVSERAKNEMNAYFSDLIGLRSDS-------A  210 (406)
T ss_dssp             HH-HHTCCGGGHHHHHHHHHHHHHHHT--------T-----------CCCCHHHHTHHHHHHHHHHHTSCCS-------C
T ss_pred             HH-HhCCCHHHHHHHHHHHHHHHhccC--------C-----------HHHHHHHHHHHHHHHHHHHHHHHhC-------C
Confidence            98 599987665555554443332110        1           0123456667788888888776532       2


Q ss_pred             cccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCccc
Q 047291          278 AKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASD  357 (511)
Q Consensus       278 ~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~  357 (511)
                      .+|+++.|+++..+    ..++++++.+++..+++|| |||+.+++|++++|++||++|+||++|+              
T Consensus       211 ~~d~l~~ll~~~~~----~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~--------------  271 (406)
T 1s1f_A          211 GEDVTSLLGAAVGR----DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEP--------------  271 (406)
T ss_dssp             CCSHHHHHHHHHHT----TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCG--------------
T ss_pred             CCCHHHHHHHhhcc----cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCH--------------
Confidence            46899999986432    3699999999999999999 9999999999999999999999999984              


Q ss_pred             ccCchhHHHHHhhhcCCCCCCc-cccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCC
Q 047291          358 INQMEYLKCVIKESLRLHAPAP-LLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFM  436 (511)
Q Consensus       358 l~~lp~l~a~i~E~lRl~~~~~-~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~  436 (511)
                          .|++|||+|+||++|+++ ...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.       
T Consensus       272 ----~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------  340 (406)
T 1s1f_A          272 ----EIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP-------  340 (406)
T ss_dssp             ----GGHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC---------
T ss_pred             ----HHHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC-------
Confidence                379999999999999999 45679999999999999999999999999999999999999999999995       


Q ss_pred             CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEe
Q 047291          437 GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVP  506 (511)
Q Consensus       437 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (511)
                         ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++.  .++.+..  +...+....+.|+.
T Consensus       341 ---~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~--~~~~~~~~~lpv~~  404 (406)
T 1s1f_A          341 ---NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP--EDVPFKK--GALIRGPEALPVTW  404 (406)
T ss_dssp             ---CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGSCBCS--SCSBCCBSCCEEEC
T ss_pred             ---CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCC--ccceecc--CcccCCcceeEEee
Confidence               2479999999999999999999999999999999 79987652  1223332  33345666666654


No 42 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.3e-60  Score=458.12  Aligned_cols=352  Identities=17%  Similarity=0.193  Sum_probs=293.6

Q ss_pred             cCCCCCcHHHHHHHHhh--CCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCchhH
Q 047291           61 QLGNLPHRSLRALSKKY--GPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYW  138 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~ky--G~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (511)
                      .+..+++.++.+++++|  |||+++.+++ +.++|+||+++++|++ +...|++++........ .++...+++.+|+.|
T Consensus        16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~-~~~~~~~~~~~g~~~   92 (398)
T 4fb2_A           16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYET-GEFELMMAGQDDPVH   92 (398)
T ss_dssp             CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC-----CCCTTTTCCTTHH
T ss_pred             hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCC-cccccCcccCCchHH
Confidence            45678999999999999  9999999886 5999999999999995 44566665543321111 122234566789999


Q ss_pred             HHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhHHHHHH
Q 047291          139 REIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKFGTISR  217 (511)
Q Consensus       139 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~  217 (511)
                      +++|+. +.+.|+++.++.+.+.+.+.++++++.+.+    ++.+|+..++ ..+++++++. +||.+..+.+.+.....
T Consensus        93 ~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~  166 (398)
T 4fb2_A           93 KKYRQL-VAKPFSPEATDLFTEQLRQSTNDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPEDGDTYRRWVW  166 (398)
T ss_dssp             HHHHHH-HHTTTCHHHHHTTHHHHHHHHHHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGGGHHHHHHHHH
T ss_pred             HHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHH
Confidence            999999 588999999999999999999999988754    3468876555 6899999999 68988765555555444


Q ss_pred             HHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccC
Q 047291          218 RLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHE  297 (511)
Q Consensus       218 ~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~  297 (511)
                      .+...                    .......++.+.+.+++.+.++++++.       ..+|+++.|+++..++   ..
T Consensus       167 ~~~~~--------------------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~~---~~  216 (398)
T 4fb2_A          167 AITHV--------------------ENPEEGAEIFAELVAHARTLIAERRTN-------PGNDIMSRVIMSKIDG---ES  216 (398)
T ss_dssp             HHHHC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBTT---BC
T ss_pred             HHhcC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHcccCC---CC
Confidence            43320                    111246677888899999999988753       3468999999875532   35


Q ss_pred             CChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCC
Q 047291          298 LSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAP  377 (511)
Q Consensus       298 l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~  377 (511)
                      +++++++.++..+++||+|||+++++|++++|++||++|+||++|++                  +++|||+|+||++|+
T Consensus       217 l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~  278 (398)
T 4fb2_A          217 LSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE------------------LIPNAVDELLRFYGP  278 (398)
T ss_dssp             CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCC
T ss_pred             CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999999953                  689999999999999


Q ss_pred             CccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchH
Q 047291          378 APLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLF  457 (511)
Q Consensus       378 ~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  457 (511)
                      ++  .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|+||.          ..++|||+|+|.|+|++|
T Consensus       279 ~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G~~l  346 (398)
T 4fb2_A          279 AM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP----------NRHLSLGHGIHRCLGAHL  346 (398)
T ss_dssp             BC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCSTTCCTTHHH
T ss_pred             cC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC----------CCCCCCCCCCcCCCCHHH
Confidence            99  569999999999999999999999999999999999999999999972          367999999999999999


Q ss_pred             HHHHHHHHHHHhHhhc-ccccCCCC
Q 047291          458 GVTSAEGVVANLLYWF-DWKLPGDT  481 (511)
Q Consensus       458 A~~e~~~~la~ll~~f-~~~~~~~~  481 (511)
                      |.+|++++++.|+++| +++++++.
T Consensus       347 A~~e~~~~l~~ll~~f~~~~~~~~~  371 (398)
T 4fb2_A          347 IRVEARVAITEFLKRIPEFSLDPNK  371 (398)
T ss_dssp             HHHHHHHHHHHHHHHCCSCEECTTS
T ss_pred             HHHHHHHHHHHHHHhCCCcEECCCC
Confidence            9999999999999999 99998653


No 43 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=5e-60  Score=455.45  Aligned_cols=381  Identities=15%  Similarity=0.233  Sum_probs=300.8

Q ss_pred             CCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccch----hhhccCCceeEecCCchh
Q 047291           62 LGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAA----DIFLYGCIDIAFSPYGEY  137 (511)
Q Consensus        62 ~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  137 (511)
                      +..+++.++.++ ++||||+++++++.++++|++|++++++++++ ..|+.++.....    ......+ ..++..+|+.
T Consensus        11 ~~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~g~~   87 (404)
T 3ejb_B           11 FLKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQN-QMMLFQNQPD   87 (404)
T ss_dssp             HHHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHH-TSGGGCCTTH
T ss_pred             cccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhh-cchhhcCCch
Confidence            346788889888 58999999999999999999999999999866 456555431110    0001111 3346678999


Q ss_pred             HHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhHHHHH
Q 047291          138 WREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKFGTIS  216 (511)
Q Consensus       138 ~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~  216 (511)
                      |+++|+. +.+.|+++.++.+.+.+.+.++.+++.+.+    ++.+|+..++ ..++.++++.+ ||.+..+.+.+....
T Consensus        88 h~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~  161 (404)
T 3ejb_B           88 HRRLRTL-ASGAFTPRTTESYQPYIIETVHHLLDQVQG----KKKMEVISDFAFPLASFVIANI-IGVPEEDREQLKEWA  161 (404)
T ss_dssp             HHHHHHH-HHGGGSHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTHHHHHHHHHHHH-HTCCGGGHHHHHHHH
T ss_pred             HHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHHHHHhhh----cCCcchHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHH
Confidence            9999999 588999999999999999999999998864    4679987655 45888999884 898876655555554


Q ss_pred             HHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccccccc
Q 047291          217 RRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKH  296 (511)
Q Consensus       217 ~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~  296 (511)
                      ..+.....       .|...      ...+...+..+.+.+++.+.++++++.       ..+|+++.++ +..++   .
T Consensus       162 ~~~~~~~~-------~p~~~------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll-~~~~~---~  217 (404)
T 3ejb_B          162 ASLIQTID-------FTRSR------KALTEGNIMAVQAMAYFKELIQKRKRH-------PQQDMISMLL-KGREK---D  217 (404)
T ss_dssp             HHHHGGGS-------TTCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHH-HC-------
T ss_pred             HHHHHhcc-------CCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHhC-------CcchHHHHHH-hcccC---C
Confidence            44432221       12111      123445677888889999999888742       3468999999 43322   3


Q ss_pred             CCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCC
Q 047291          297 ELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHA  376 (511)
Q Consensus       297 ~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~  376 (511)
                      +++++++..++..+++||+|||+++++|++++|++||++|+||++|+                  .|++|||+|+||++|
T Consensus       218 ~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p  279 (404)
T 3ejb_B          218 KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENP------------------DLIGTAVEECLRYES  279 (404)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHHhCC
Confidence            69999999999999999999999999999999999999999999984                  379999999999999


Q ss_pred             CCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCch
Q 047291          377 PAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTL  456 (511)
Q Consensus       377 ~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  456 (511)
                      +++ ..+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|+||-          ..++|||+|+|.|+|++
T Consensus       280 ~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~----------~~~~~Fg~G~r~C~G~~  348 (404)
T 3ejb_B          280 PTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP----------NPHLSFGHGHHVCLGSS  348 (404)
T ss_dssp             SBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTCCTTHH
T ss_pred             ccc-ccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC----------CCCCCCCCcCccCcCHH
Confidence            999 5579999999999999999999999999999999999999999999982          25799999999999999


Q ss_pred             HHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          457 FGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       457 ~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ||++|++++++.|+++| +++++++.    +.+..  +...+....+.|++++|.
T Consensus       349 lA~~e~~~~l~~ll~~f~~~~l~~~~----~~~~~--~~~~~~~~~lpv~~~~~~  397 (404)
T 3ejb_B          349 LARLEAQIAINTLLQRMPSLNLADFE----WRYRP--LFGFRALEELPVTFEASW  397 (404)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEEC--C----CCBCS--CSSBCCBSCCEEECC---
T ss_pred             HHHHHHHHHHHHHHHhCcccccCCCC----ceecc--CcccCCcceeEEEEeccc
Confidence            99999999999999999 99997432    23333  334566677777777663


No 44 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=3.7e-59  Score=450.49  Aligned_cols=355  Identities=17%  Similarity=0.226  Sum_probs=298.1

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEeec-CcCEEEecCHHHHHHHHHhcCcccccCCC---ccchhhhc---cCCceeEecC
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHWG-QTPTVIVSSADMAKEMMKTHDIIFSNRPK---TTAADIFL---YGCIDIAFSP  133 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~vvv~~p~~i~~i~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~  133 (511)
                      .+..+++.++.+++++ |||++++++ |.+.++|++|+++++|+.++  .|+.++.   ........   ......+++.
T Consensus        26 ~~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  102 (417)
T 3tyw_A           26 GCPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRT  102 (417)
T ss_dssp             SSTTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGC
T ss_pred             ccccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhc
Confidence            4567999999999988 999999986 68999999999999999865  4555321   11111100   0122455667


Q ss_pred             CchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhH
Q 047291          134 YGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKF  212 (511)
Q Consensus       134 ~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~  212 (511)
                      +|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+   +++++|+.+++ ..++.++++.+ ||.+.++.+.+
T Consensus       103 dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~  177 (417)
T 3tyw_A          103 DAPEHTRYRRM-LLPAFTVRRVRAMRPAVQARVDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHDLEFF  177 (417)
T ss_dssp             CHHHHHHHHHH-HGGGGCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTTTHH
T ss_pred             CCcHHHHHHHH-HHhhhCHHHHHHHHHHHHHHHHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHHHHH
Confidence            89999999999 579999999999999999999999999986   35679999988 57899999987 89988766666


Q ss_pred             HHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccc
Q 047291          213 GTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDA  292 (511)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~  292 (511)
                      ......+....                   .......++.+.+.+++.+.++++++.       ..+|+++.+++...++
T Consensus       178 ~~~~~~~~~~~-------------------~~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~~  231 (417)
T 3tyw_A          178 RDVTRISGSRN-------------------STAEQVSEALGGLFGLLGGLVAERREE-------PRDDLISKLVTDHLVP  231 (417)
T ss_dssp             HHHHHHHHSSS-------------------SCTTHHHHHHHHHHHHHHHHHHHHHSS-------CCSSHHHHHHHHTTTT
T ss_pred             HHHHHHHhccc-------------------CCHHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCHHHHHHHhcccC
Confidence            55544332111                   112346677888899999999988753       3479999999876543


Q ss_pred             ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhc
Q 047291          293 TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESL  372 (511)
Q Consensus       293 ~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  372 (511)
                         .++++++++.++..+++||+|||+++++|++++|++||++|+||++|+                  .||+|||+|+|
T Consensus       232 ---~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~l  290 (417)
T 3tyw_A          232 ---GNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDP------------------DLMPAAVDELL  290 (417)
T ss_dssp             ---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCG------------------GGHHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhCh------------------HHHHHHHHHHH
Confidence               369999999999999999999999999999999999999999999984                  37999999999


Q ss_pred             CCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCC
Q 047291          373 RLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGC  452 (511)
Q Consensus       373 Rl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C  452 (511)
                      |++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|+||.          ..++|||+|+|.|
T Consensus       291 Rl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C  360 (417)
T 3tyw_A          291 RVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD----------NHHVAFGYGVHQC  360 (417)
T ss_dssp             HHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC----------CCCCTTCCSTTCC
T ss_pred             HhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC----------CCCCCCCCCCccC
Confidence            999999987679999999999999999999999999999999999999999999993          3589999999999


Q ss_pred             CCchHHHHHHHHHHHHhHhhc-ccccCCC
Q 047291          453 PGTLFGVTSAEGVVANLLYWF-DWKLPGD  480 (511)
Q Consensus       453 ~G~~~A~~e~~~~la~ll~~f-~~~~~~~  480 (511)
                      +|++||.+|++++++.|+++| +++++.+
T Consensus       361 ~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          361 VGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence            999999999999999999999 9998754


No 45 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=2.9e-60  Score=456.62  Aligned_cols=382  Identities=19%  Similarity=0.231  Sum_probs=307.2

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCC-Cccchh--hhc--------cCCce
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRP-KTTAAD--IFL--------YGCID  128 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~-~~~~~~--~~~--------~~~~~  128 (511)
                      .+..+++..+.++ ++||+|+++++ ++.+.++|+||+++++|+.++.  ++..+ ......  ...        ....+
T Consensus        14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (411)
T 1gwi_A           14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR   90 (411)
T ss_dssp             TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred             cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence            4567889999999 99999999997 8889999999999999998653  22222 111000  000        01023


Q ss_pred             eEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHH-HHHHHhhhhhhcccccc
Q 047291          129 IAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLL-TVTNDTVGRCVFGKKAN  207 (511)
Q Consensus       129 ~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~  207 (511)
                      .+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+   +++++|+.+++. .+++++++. +||.+.+
T Consensus        91 ~l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~  165 (411)
T 1gwi_A           91 SMLTVDGAEHRRLRTL-VAQALTVRRVEHMRGRITELTDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEEA  165 (411)
T ss_dssp             SGGGCCHHHHHHHHHH-HTTTSCHHHHHTTHHHHHHHHHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred             ccccCCcHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCHH
Confidence            4566789999999999 578999999999999999999999998863   357899998886 599999996 7999876


Q ss_pred             chhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHH
Q 047291          208 EESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQ  287 (511)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~  287 (511)
                      +.+.+......+...    .               ....+..++.+.+.+++.+.++++++.       ..+|+++.|++
T Consensus       166 ~~~~~~~~~~~~~~~----~---------------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~  219 (411)
T 1gwi_A          166 RLPRLKVLFEKFFST----Q---------------TPPEEVVATLTELASIMTDTVAAKRAA-------PGDDLTSALIQ  219 (411)
T ss_dssp             GHHHHHHHHHHHHCT----T---------------SCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHH
T ss_pred             HHHHHHHHHHHHhcc----C---------------CChHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHH
Confidence            544555444433221    0               011345667788889999999888753       23689999998


Q ss_pred             hccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHH
Q 047291          288 VQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCV  367 (511)
Q Consensus       288 ~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~  367 (511)
                      +..+   ...++++++.+++..+++||+|||+++++|++++|++||++|++|++|+                  +|++||
T Consensus       220 ~~~~---~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~  278 (411)
T 1gwi_A          220 ASEN---GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE------------------AEWSAV  278 (411)
T ss_dssp             CCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS------------------SCHHHH
T ss_pred             hccc---CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh------------------HHHHHH
Confidence            7542   2369999999999999999999999999999999999999999999972                  469999


Q ss_pred             HhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCcceeecC
Q 047291          368 IKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLW-DNPEEFIPERFYNNPVNFMGEDFHYIPFG  446 (511)
Q Consensus       368 i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg  446 (511)
                      |+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++| +||++|+||||.+         ..++|||
T Consensus       279 i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~---------~~~lpFG  349 (411)
T 1gwi_A          279 VEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG---------NRHISFG  349 (411)
T ss_dssp             HHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS---------SCCCTTC
T ss_pred             HHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC---------CCcccCC
Confidence            99999999999976679999999999999999999999999999999999 9999999999952         3689999


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          447 AGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       447 ~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      +|+|.|+|++||++|++++++.|+++| ++++..+.  .++.+.  .+.+.++...+.|++++|.
T Consensus       350 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~--~~~~~~~~~~lpv~~~~r~  410 (411)
T 1gwi_A          350 HGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPA--AELRNK--PVVTQNDLFELPVRLAHHH  410 (411)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCBC--SCTTBCCBSCCEEESSCC-
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCc--cccccc--ccccccCcceeEEEecCCC
Confidence            999999999999999999999999999 79986432  122332  2344578889999999885


No 46 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=6.4e-60  Score=453.53  Aligned_cols=376  Identities=16%  Similarity=0.173  Sum_probs=302.3

Q ss_pred             CCCCcHHHHHHHHhhCCcEEEeecC--cCEEEecCHHHHHHHHHhcCcccccCCCccc----hhhhccCC-ceeEecCCc
Q 047291           63 GNLPHRSLRALSKKYGPLMLIHWGQ--TPTVIVSSADMAKEMMKTHDIIFSNRPKTTA----ADIFLYGC-IDIAFSPYG  135 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~~~~~~~--~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~  135 (511)
                      +++++.++.+++ +||||+++.+++  .+.++|++|+++++|+.++  .|.+.+....    .... .+. ...+++.++
T Consensus        26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~-~~~~~~~l~~~dg  101 (411)
T 2dkk_A           26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPH-FKPRPGSLAFADQ  101 (411)
T ss_dssp             SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSC-CCCCTTCSTTCCT
T ss_pred             cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccc-hhccccccccCCc
Confidence            456779999987 899999999754  7899999999999999753  4544432211    1111 110 234566789


Q ss_pred             hhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHH-HHHHHhhhhhhccccccchhhHHH
Q 047291          136 EYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLL-TVTNDTVGRCVFGKKANEESKFGT  214 (511)
Q Consensus       136 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~  214 (511)
                      +.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+.   +.++|+.+++. .+++++++. +||.+.++.+.+..
T Consensus       102 ~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~  176 (411)
T 2dkk_A          102 PDHNRLRRA-VAGAFTVGATKRLRPRAQEILDGLVDGILAE---GPPADLVERVLEPFPIAVVSE-VMGVPAADRERVHS  176 (411)
T ss_dssp             THHHHHHHH-HGGGSSHHHHHHHHHHHHHHHHHHHHHHHHH---CSCEEHHHHTTTHHHHHHHHH-HHTCCSSHHHHHHH
T ss_pred             hHHHHHHHH-hhHhhCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeehHHHHHHHHHHHHHHH-HhCCCHHHHHHHHH
Confidence            999999999 6889999999999999999999999999763   45899998776 699999998 59998764333332


Q ss_pred             HHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccccc
Q 047291          215 ISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATT  294 (511)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  294 (511)
                      ..    .....     ..+          ..+...++.+.+.+++.+.++++++.       ..+|+++.|+++ .++  
T Consensus       177 ~~----~~~~~-----~~~----------~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~dll~~ll~~-~~~--  227 (411)
T 2dkk_A          177 WT----RQIIS-----TSG----------GAEAAERAKRGLYGWITETVRARAGS-------EGGDVYSMLGAA-VGR--  227 (411)
T ss_dssp             HH----GGGCS-----SCS----------CSHHHHHHHHHHHHHHHHHHHTTTTC-------CSSCHHHHHHHH-HHT--
T ss_pred             HH----HHHHh-----ccc----------hHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHh-cCC--
Confidence            22    11111     011          12345667788888888888877642       246899999987 322  


Q ss_pred             ccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCC
Q 047291          295 KHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRL  374 (511)
Q Consensus       295 ~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  374 (511)
                       ..++++++++++..+++|| |||+.+++|++++|++||++|++|++|+                  .|++|||+|+||+
T Consensus       228 -~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl  287 (411)
T 2dkk_A          228 -GEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERP------------------GARGTALDELLRW  287 (411)
T ss_dssp             -TSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCT------------------TCCHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHHHhh
Confidence             3699999999999999999 9999999999999999999999999985                  2789999999999


Q ss_pred             CCCCccc-cccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCC
Q 047291          375 HAPAPLL-VHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCP  453 (511)
Q Consensus       375 ~~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~  453 (511)
                      +|+++.. .+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|||+||.          ..++|||+|+|.|+
T Consensus       288 ~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~----------~~~l~FG~G~r~C~  357 (411)
T 2dkk_A          288 ISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP----------NPHLAYGNGHHFCT  357 (411)
T ss_dssp             SCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS----------CCCCTTCCSTTSCT
T ss_pred             CCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC----------CCCCCCCCCCCCCc
Confidence            9999955 679999999999999999999999999999999999999999999995          25799999999999


Q ss_pred             CchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          454 GTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       454 G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      |++||++|++++++.|+++| ++++.++.  .++.+..  +.+.+....+.|++++|+
T Consensus       358 G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~--~~~~~~~~~lpv~~~~R~  411 (411)
T 2dkk_A          358 GAVLARMQTELLVDTLLERLPGLRLAVPA--EQVAWRR--KTMIRGPRTLPCTWHHHH  411 (411)
T ss_dssp             THHHHHHHHHHHHHHHHHHSTTCEESSCG--GGCCBCC--SSSBCCBSCCEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCcEECCCc--ccccccc--CcccCCcceeEEEeccCC
Confidence            99999999999999999999 89987642  1223332  344577889999999986


No 47 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.2e-59  Score=451.35  Aligned_cols=375  Identities=18%  Similarity=0.224  Sum_probs=299.6

Q ss_pred             CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCchhHHHHH
Q 047291           63 GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIR  142 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  142 (511)
                      ..+++.++.++++ |||||++.   .+.++|++|+++++|+.++. .|++++... ....  ++ +.++..+|+.|+++|
T Consensus        17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~~-~~l~~~~g~~h~~~R   87 (398)
T 2xkr_A           17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--AL-PMMIDMDDPAHLLRR   87 (398)
T ss_dssp             CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--CC-SSGGGCCTTHHHHHH
T ss_pred             ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--cc-ccccccCchHHHHHH
Confidence            4678899999987 99999875   37899999999999997653 566654322 1111  12 345566899999999


Q ss_pred             HHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHH-HHHHHHHHhhhhhhccccccchhhHHHHHHHHHH
Q 047291          143 RIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSE-MLLTVTNDTVGRCVFGKKANEESKFGTISRRLTT  221 (511)
Q Consensus       143 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~  221 (511)
                      +. +.+.|++..++.+.+.+.+.++++++.+.+    ++++|+.. +...+++++++.+ ||.+.++.+.+......+..
T Consensus        88 ~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~~~~~  161 (398)
T 2xkr_A           88 KL-VNAGFTRKRVKDKEASIAALCDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQRDMFLRWSDDLVT  161 (398)
T ss_dssp             HH-HGGGSCHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHHH
T ss_pred             HH-hhhhhCHHHHHHHHHHHHHHHHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHh
Confidence            99 588999999999999999999999998864    24799994 4568999999998 99987665555555444433


Q ss_pred             hccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCChH
Q 047291          222 QLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQE  301 (511)
Q Consensus       222 ~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~  301 (511)
                      ...    ..+.|         ...++..++.+.+.+++.+.++++++.       ..+|+++.|+++..++   ..++++
T Consensus       162 ~~~----~~~~p---------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~~---~~ls~~  218 (398)
T 2xkr_A          162 FLS----SHVSQ---------EDFQITMDAFAAYNDFTRATIAARRAD-------PTDDLVSVLVSSEVDG---ERLSDD  218 (398)
T ss_dssp             HHT----SCCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBTT---BCCCHH
T ss_pred             ccC----cccch---------hhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhccC---CCCCHH
Confidence            211    00111         122345677788889999999888752       2468999999875422   369999


Q ss_pred             HHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccc
Q 047291          302 NLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLL  381 (511)
Q Consensus       302 ~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~  381 (511)
                      ++.+++..+++||+|||+++++|++++|++||++|++|++|++                  |++|||+|+||++|+++. 
T Consensus       219 ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-  279 (398)
T 2xkr_A          219 ELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPGAIEEMLRWTAPVKN-  279 (398)
T ss_dssp             HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBCE-
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhcccccC-
Confidence            9999999999999999999999999999999999999999963                  899999999999999997 


Q ss_pred             cccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHH
Q 047291          382 VHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTS  461 (511)
Q Consensus       382 ~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e  461 (511)
                      .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||..          .++|||+|+|.|+|++||.+|
T Consensus       280 ~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e  349 (398)
T 2xkr_A          280 MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN----------SHLAFGFGTHFCLGNQLARLE  349 (398)
T ss_dssp             EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC----------CCCTTCCSTTCCTTHHHHHHH
T ss_pred             cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC----------CCCcCCCCCcCCcCHHHHHHH
Confidence            6799999999999999999999999999999999999999999999742          379999999999999999999


Q ss_pred             HHHHHHHhHhhc-ccccCCCCCCCCCCC---ccccCceecccCceeEEeecc
Q 047291          462 AEGVVANLLYWF-DWKLPGDTVGEDLDM---TETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       462 ~~~~la~ll~~f-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      ++++++.|+++| ++++.++.     .+   ............+|.+++++|
T Consensus       350 ~~~~l~~ll~~f~~~~~~~~~-----~~~~~~~~~~~~~~~~lpv~~~p~~r  396 (398)
T 2xkr_A          350 LSLMTERVLRRLPDLRLVADD-----SVLPLRPANFVSGLESMPVVFTPSPP  396 (398)
T ss_dssp             HHHHHHHHHHHSTTCEESCTT-----CCCCBCCCSSBCCBSCCEEECCCCCC
T ss_pred             HHHHHHHHHHhCCCceECCCc-----ceecccCcccccCccceeEEecCCCC
Confidence            999999999999 59986432     13   222333334444555555555


No 48 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=1.9e-60  Score=461.53  Aligned_cols=386  Identities=19%  Similarity=0.245  Sum_probs=294.9

Q ss_pred             CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCchhHHHHH
Q 047291           63 GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIR  142 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  142 (511)
                      ..+++.++.++ ++||||+++..++  .++|++|+++++|+.++.. |+.++........ . +.+.+++.+|+.|+++|
T Consensus        52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~-~-~~~~l~~~dg~~h~~~R  125 (441)
T 3nc3_A           52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPV-M-RGPVLAQMHGKEHSAKR  125 (441)
T ss_dssp             HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCS-C-C-------------CCH
T ss_pred             hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccccc-c-CCCccccCCcHHHHHHH
Confidence            45788888776 6899999987665  8999999999999987644 6655443322221 1 22446677899999999


Q ss_pred             HHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHH-HHHHHHHhhhhhhccccccchhhHHHHHHHHHH
Q 047291          143 RIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEM-LLTVTNDTVGRCVFGKKANEESKFGTISRRLTT  221 (511)
Q Consensus       143 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~  221 (511)
                      +. +.+.|++..++.+.+.+.+.++++++.|.+    ++.+|+... ...++.++++. +||.+..+.+.+......+..
T Consensus       126 r~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~~~~~~~~  199 (441)
T 3nc3_A          126 RI-VVRSFIGDALDHLSPLIKQNAENLLAPYLE----RGKSDLVNDFGKTFAVCVTMD-MLGLDKRDHEKISEWHSGVAD  199 (441)
T ss_dssp             HH-HHHHHHHTHHHHHHHHHHHHHHHHHTTTTT----TTEEECCCCCHHHHHHHHHHH-HTTCCGGGHHHHHHHHHHHHH
T ss_pred             HH-HHhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCcHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHH
Confidence            99 589999999999999999999999988754    467997544 45689999998 589987666666666555544


Q ss_pred             hccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCChH
Q 047291          222 QLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQE  301 (511)
Q Consensus       222 ~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~  301 (511)
                      .......    +  .      .......++.+.+.+++.++|+++++       ...+|+++.|+++..++   ..++++
T Consensus       200 ~~~~~~~----~--~------~~~~~~~~~~~~l~~~~~~~i~~rr~-------~~~~Dll~~Ll~~~~~~---~~ls~~  257 (441)
T 3nc3_A          200 FITSISQ----S--P------EARAHSLWCSEQLSQYLMPVIKERRV-------NPGSDLISILCTSEYEG---MALSDK  257 (441)
T ss_dssp             HHHCSCC----C--H------HHHHHHHHHHHHHHHHHHHHHHHHTT-------SCCSSHHHHHCC---------CCCHH
T ss_pred             hcccccC----C--h------HHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhhccC---CCCCHH
Confidence            4322110    0  0      11234567778889999999998874       23468999998765432   369999


Q ss_pred             HHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccc
Q 047291          302 NLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLL  381 (511)
Q Consensus       302 ~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~  381 (511)
                      ++++++..+++||+|||+.+++|++++|++||++|++|++|                  ++|+++||+|+||++|+++. 
T Consensus       258 el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E------------------~~~l~a~i~E~LRl~pp~~~-  318 (441)
T 3nc3_A          258 DILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD------------------RSLVPRAIAETLRYKPPVQL-  318 (441)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHC------------------GGGHHHHHHHHHHHSCSBCE-
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhC------------------HHHHHHHHHHhhhcCCcccC-
Confidence            99999999999999999999999999999999999999997                  37999999999999999998 


Q ss_pred             cccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHH
Q 047291          382 VHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTS  461 (511)
Q Consensus       382 ~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e  461 (511)
                      .+|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||+.+.......+..++|||+|+|.|+|++||++|
T Consensus       319 ~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e  398 (441)
T 3nc3_A          319 IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNE  398 (441)
T ss_dssp             EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHHH
T ss_pred             ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHHH
Confidence            56999999999999999999999999999999999999999999999765433222356899999999999999999999


Q ss_pred             HHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEee
Q 047291          462 AEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPV  507 (511)
Q Consensus       462 ~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (511)
                      ++++++.|+++| +++++++.    ..+..  +.+.+....+.|+.+
T Consensus       399 ~~~~l~~ll~~f~~~~l~~~~----~~~~~--~~~~~~~~~lpv~~~  439 (441)
T 3nc3_A          399 IEIVANIVLDKMRNIRLEEDF----CYAES--GLYTRGPVSLLVAFD  439 (441)
T ss_dssp             HHHHHHHHHHHSTTCEECTTC----CCCEE--CSSBCEESCCEEECC
T ss_pred             HHHHHHHHHHhCcccEECCCC----ccccc--CccccCcceeEEEEe
Confidence            999999999999 99987642    22322  334455666666654


No 49 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=3.1e-59  Score=449.60  Aligned_cols=377  Identities=17%  Similarity=0.216  Sum_probs=298.3

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCCCc-cchhhhcc-CCceeEecCCchh
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRPKT-TAADIFLY-GCIDIAFSPYGEY  137 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~  137 (511)
                      .+..+++.++.++ ++||||+++++ ++.+.++|+||+++++|+.++  .|.+++.. ..+..... .+...+++.+|+.
T Consensus        34 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  110 (417)
T 2y5n_A           34 VHGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPE  110 (417)
T ss_dssp             SSSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCTTH
T ss_pred             hhccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCchH
Confidence            3567899999999 89999999997 899999999999999999864  25444322 11110100 0123355668999


Q ss_pred             HHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHH-HHHHHhhhhhhccccccchhhHHHHH
Q 047291          138 WREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLL-TVTNDTVGRCVFGKKANEESKFGTIS  216 (511)
Q Consensus       138 ~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~  216 (511)
                      |+++|+. +.+.|+++.++.+.+.+.+.++++++.+..   ++.++|+.+++. .+++++++. +||.+.++.+.+....
T Consensus       111 h~~~R~~-l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~  185 (417)
T 2y5n_A          111 HSRLRRL-VVKAFTARRAESLRPRAREIAHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSADHDRFTRWS  185 (417)
T ss_dssp             HHHHHHH-HHHHSCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred             HHHHHHH-HhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHHHHHHHHH
Confidence            9999999 578899999999999999999999999974   223799997764 699999998 6999876544443332


Q ss_pred             HHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccccccc
Q 047291          217 RRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKH  296 (511)
Q Consensus       217 ~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~  296 (511)
                      ..+    ..  ...  +          ..++..++...+.+++.+.++++++.       ..+|+++.|+++..+   ..
T Consensus       186 ~~~----~~--~~~--~----------~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~---~~  237 (417)
T 2y5n_A          186 GAF----LS--TAE--V----------TAEEMQEAAEQAYAYMGDLIDRRRKE-------PTDDLVSALVQARDQ---QD  237 (417)
T ss_dssp             HTT----ST--TCC--C----------CHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBT---TB
T ss_pred             HHH----hc--ccC--C----------CHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhhcc---CC
Confidence            211    11  000  0          11345677788889999999988753       236899999987542   23


Q ss_pred             CCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCC
Q 047291          297 ELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHA  376 (511)
Q Consensus       297 ~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~  376 (511)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+||++|+                  .|++|||+|+||++|
T Consensus       238 ~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p  299 (417)
T 2y5n_A          238 SLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRP------------------ELIPSAVEELTRWVP  299 (417)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHCC
T ss_pred             CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHHhcC
Confidence            69999999999999999999999999999999999999999999984                  379999999999999


Q ss_pred             CCc-cccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCc
Q 047291          377 PAP-LLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGT  455 (511)
Q Consensus       377 ~~~-~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~  455 (511)
                      +++ ...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.          ..++|||+|+|.|+|+
T Consensus       300 ~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r~C~G~  369 (417)
T 2y5n_A          300 LGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP----------NQHLGFGHGVHHCLGA  369 (417)
T ss_dssp             CBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS----------CCCCTTCCSTTSCTTH
T ss_pred             CccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC----------CCcCCCCCCCcCCcCH
Confidence            999 55679999999999999999999999999999999999999999999983          2579999999999999


Q ss_pred             hHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEE
Q 047291          456 LFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLV  505 (511)
Q Consensus       456 ~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (511)
                      +||++|++++++.|+++| ++++.++.  .++.+..  +.+.+....+.|+
T Consensus       370 ~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~~--~~~~~~~~~lpv~  416 (417)
T 2y5n_A          370 PLARVELQVALEVLLQRLPGIRLGIPE--TQLRWSE--GMLLRGPLELPVV  416 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCBCC--CSSBCCBSCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCcEeCCCC--ccceecc--CcccCCcceeEEe
Confidence            999999999999999999 59987542  2233333  2333455555543


No 50 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=1.5e-59  Score=453.18  Aligned_cols=384  Identities=16%  Similarity=0.214  Sum_probs=308.8

Q ss_pred             CCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCC-----cc-c--hhhhccCCceeEecC
Q 047291           62 LGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPK-----TT-A--ADIFLYGCIDIAFSP  133 (511)
Q Consensus        62 ~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~-----~~-~--~~~~~~~~~~~~~~~  133 (511)
                      +..+++.++.++ ++||+|++ + ++.+.++|++|+++++|+.++.  |++++.     .. .  ...+.......++..
T Consensus        24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   98 (419)
T 1q5d_A           24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGL   98 (419)
T ss_dssp             TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred             hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccC
Confidence            457899999999 79999999 5 7789999999999999998664  766541     11 0  011110002335566


Q ss_pred             CchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHH-HHHHHHHhhhhhhccccccchhhH
Q 047291          134 YGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEM-LLTVTNDTVGRCVFGKKANEESKF  212 (511)
Q Consensus       134 ~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~  212 (511)
                      +|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+..    ++++|+..+ ...+++++++.+ ||.+.++.+.+
T Consensus        99 ~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~  172 (419)
T 1q5d_A           99 PPEDHARVRKL-VNPSFTSRAIDLLRAEIQRTVDQLLDARSG----QEEFDVVRDYAEGIPMRAISAL-LKVPAECDEKF  172 (419)
T ss_dssp             CHHHHHHHHHH-HGGGGSHHHHGGGHHHHHHHHHHHHHHHTT----SSCEETTTTTGGGSHHHHHHHH-TTCCGGGHHHH
T ss_pred             CchHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH-hCCCHHHHHHH
Confidence            89999999999 588999999999999999999999999864    247999865 489999999998 99988765556


Q ss_pred             HHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccc-cHHHHHHHhccc
Q 047291          213 GTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAK-DFVDILLQVQKD  291 (511)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~ll~~~~~  291 (511)
                      ......+.....    ...+|+.      ....++..++...+.+++.+.++++++.       ..+ |+++.|+++..+
T Consensus       173 ~~~~~~~~~~~~----~~~~P~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~~dll~~ll~~~~~  235 (419)
T 1q5d_A          173 RRFGSATARALG----VGLVPRV------DEETKTLVASVTEGLALLHGVLDERRRN-------PLENDVLTMLLQAEAD  235 (419)
T ss_dssp             HHHHHHHHHHTT----TTTSSCC------CSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSCHHHHHHHHHHS
T ss_pred             HHHHHHHHHhcc----cccccCC------hHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCCHHHHHHhhhcc
Confidence            555554443221    1123321      1223456677888999999999988753       234 899999987432


Q ss_pred             cccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhh
Q 047291          292 ATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKES  371 (511)
Q Consensus       292 ~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~  371 (511)
                         ...++++++.+++..+++||+|||+++++|++++|++||++|+||++|+                  .|++|||+|+
T Consensus       236 ---~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~  294 (419)
T 1q5d_A          236 ---GSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP------------------GLMRNALDEV  294 (419)
T ss_dssp             ---STTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHH
Confidence               2369999999999999999999999999999999999999999999983                  4899999999


Q ss_pred             cCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCC
Q 047291          372 LRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRG  451 (511)
Q Consensus       372 lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~  451 (511)
                      ||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||-          ..++|||+|+|.
T Consensus       295 lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~  364 (419)
T 1q5d_A          295 LRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDT----------SASLAYGRGPHV  364 (419)
T ss_dssp             HHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCGGGC
T ss_pred             HHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCCC----------CCCCCCCCCCCc
Confidence            9999999966679999999999999999999999999999999999999999999941          357999999999


Q ss_pred             CCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccCC
Q 047291          452 CPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYSA  511 (511)
Q Consensus       452 C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  511 (511)
                      |+|++||++|++++++.|+++| ++++.++.     .+.  .+.+..+..++.|++++|++
T Consensus       365 C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~--~~~~~~~~~~l~v~~~~r~~  418 (419)
T 1q5d_A          365 CPGVSLARLEAEIAVGTIFRRFPEMKLKETP-----VFG--YHPAFRNIESLNVILKPSKA  418 (419)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEECSCC-----EEC--CCSSBCCEEECEEESSCC--
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCeEECCCc-----ccc--cccccCCCceeEEEEecCCC
Confidence            9999999999999999999999 79987641     122  23456778899999999874


No 51 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=1.4e-59  Score=450.67  Aligned_cols=377  Identities=17%  Similarity=0.213  Sum_probs=301.5

Q ss_pred             CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchh------hhccCC-ceeEecCCc
Q 047291           63 GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAAD------IFLYGC-IDIAFSPYG  135 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~  135 (511)
                      ..+++.++.++ ++||||++ +  |.+.++|++|+++++|+.++  .|..++......      ... +. ...+++.+|
T Consensus        12 ~~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g   84 (397)
T 3buj_A           12 RRDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLA-EIVGDIILFQDE   84 (397)
T ss_dssp             HHCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHH-HHHTTCGGGCCT
T ss_pred             ccCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccc-cccccccccCCc
Confidence            35788888877 59999999 6  58899999999999999752  354432111000      111 10 123456679


Q ss_pred             hhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHH-HHHHHHHhhhhhhccccccchhhHHH
Q 047291          136 EYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEM-LLTVTNDTVGRCVFGKKANEESKFGT  214 (511)
Q Consensus       136 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~  214 (511)
                      +.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+..    ++++|+... ...+++++++.+ ||.+.++.+.+..
T Consensus        85 ~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~  158 (397)
T 3buj_A           85 PDHGRLRGV-VGPAFSPSALRRLEPVIAGTVDDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAADWGAVGR  158 (397)
T ss_dssp             THHHHHHHH-HGGGSSTTTTGGGHHHHHHHHHHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGHHHHHH
T ss_pred             hhHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHHHHHHHH
Confidence            999999999 578999999999999999999999999874    358998755 578999999998 9998866555555


Q ss_pred             HHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccccc
Q 047291          215 ISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATT  294 (511)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  294 (511)
                      ....+......        .+.+     ...++..++.+.+.+++.+.++++++.       ..+|+++.|+++..+ + 
T Consensus       159 ~~~~~~~~~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~-~-  216 (397)
T 3buj_A          159 WSRDVGRTLDR--------GASA-----EDMRRGHAAIAEFADYVERALARRRRE-------GGEDLLALMLDAHDR-G-  216 (397)
T ss_dssp             HHHHHHGGGCS--------SCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCSHHHHHHHHHHT-T-
T ss_pred             HHHHHHhhcCC--------CCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHcC-------CCCCHHHHHHHhhhc-C-
Confidence            54443332110        0111     112345677788899999999988753       246899999987422 1 


Q ss_pred             ccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCC
Q 047291          295 KHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRL  374 (511)
Q Consensus       295 ~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  374 (511)
                        .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                  .|++|||+|+||+
T Consensus       217 --~ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl  276 (397)
T 3buj_A          217 --LMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP------------------DLLAQAVEECLRY  276 (397)
T ss_dssp             --SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG------------------GGHHHHHHHHHHH
T ss_pred             --CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH------------------HHHHHHHHHHHhh
Confidence              29999999999999999999999999999999999999999999984                  3899999999999


Q ss_pred             CCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCC
Q 047291          375 HAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPG  454 (511)
Q Consensus       375 ~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G  454 (511)
                      +|+++ ..+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.          ..++|||+|+|.|+|
T Consensus       277 ~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G  345 (397)
T 3buj_A          277 DPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP----------VPSMSFGAGMRYCLG  345 (397)
T ss_dssp             SCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC----------CCCSTTCCGGGCCTT
T ss_pred             cCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC----------CCCCCCCCCCccCCC
Confidence            99999 5679999999999999999999999999999999999999999999995          246999999999999


Q ss_pred             chHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          455 TLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       455 ~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      ++||++|++++++.| ++| ++++.++.  .++.+.  .+.+.+++.++.|++++|+
T Consensus       346 ~~lA~~e~~~~l~~l-~~f~~~~~~~~~--~~~~~~--~~~~~~~~~~l~v~~~~rg  397 (397)
T 3buj_A          346 SYLARTQLRAAVAAL-ARLPGLRLGCAS--DALAYQ--PRTMFRGLASLPIAFTPGG  397 (397)
T ss_dssp             HHHHHHHHHHHHHHH-HTSTTCEESSCS--TTCCBC--SCSSCCCBSCCEEECCTTC
T ss_pred             HHHHHHHHHHHHHHH-hcCCCceeCCCC--cccccc--cccccCCCcceeEEecCCC
Confidence            999999999999999 999 89987652  122332  3445678889999999985


No 52 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=4.5e-60  Score=458.48  Aligned_cols=394  Identities=15%  Similarity=0.161  Sum_probs=302.7

Q ss_pred             CCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEe--------ecCcCEEEecCHHHHHHHHHhcCcccccCCC
Q 047291           44 HNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIH--------WGQTPTVIVSSADMAKEMMKTHDIIFSNRPK  115 (511)
Q Consensus        44 ~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~--------~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~  115 (511)
                      ...||.|..+++++....-..+|+.++.++ ++||||+++.        +|+.++++|++|+++++|++++ ..|+.++.
T Consensus        17 ~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~   94 (433)
T 3ivy_A           17 VPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYEN   94 (433)
T ss_dssp             ---CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTT
T ss_pred             cCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcc
Confidence            345667777777766554456799999999 7899999998        4457899999999999999754 55665543


Q ss_pred             ccchh--------hhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHH
Q 047291          116 TTAAD--------IFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSE  187 (511)
Q Consensus       116 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~  187 (511)
                      .....        ... +....+++.+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+..    ++++|+..
T Consensus        95 ~~~~~~~~~~~~~~~~-~~~~~l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~  168 (433)
T 3ivy_A           95 GVIPRFKNDIAREDIE-VQRFVMLNMDAPHHTRLRKI-ISRGFTPRAVGRLHDELQERAQKIAAEAAA----AGSGDFVE  168 (433)
T ss_dssp             CSCCCCCTTCCHHHHH-GGGGSGGGCCTTHHHHHHHH-HGGGSCHHHHHTTHHHHHHHHHHHHHHHHH----HCEEEHHH
T ss_pred             cccccccccccccccc-cccCCccccChHHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHhh----CCCeeHHH
Confidence            32211        111 12244567789999999999 589999999999999999999999999975    35799999


Q ss_pred             HH-HHHHHHhhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHH
Q 047291          188 ML-LTVTNDTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEH  266 (511)
Q Consensus       188 ~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (511)
                      ++ ..+++++++.+ ||.+..+.+.+...    .....    ....|.+..        ....++.+.+.+++.++++++
T Consensus       169 ~~~~~~~~~vi~~l-~G~~~~~~~~~~~~----~~~~~----~~~~p~~~~--------~~~~~~~~~~~~~~~~~i~~r  231 (433)
T 3ivy_A          169 QVSCELPLQAIAGL-LGVPQEDRGKLFHW----SNEMT----GNEDPEYAH--------IDPKASSAELIGYAMKMAEEK  231 (433)
T ss_dssp             HTTSHHHHHHHHHH-HTCCHHHHHHHHHH----HTTCS----CCCCGGGTT--------CCHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHH-cCCCHHHHHHHHHH----HHHHh----ccCCchhhh--------HHHHHHHHHHHHHHHHHHHHH
Confidence            98 99999999996 89754332222221    11111    111221110        135677788889999998887


Q ss_pred             HhccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 047291          267 RNLERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRV  346 (511)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  346 (511)
                      ++       +..+|+++.|+++..++   .+++++++.+++..+++||+|||+++++|++++|++||++|++|++|++  
T Consensus       232 ~~-------~~~~dll~~ll~~~~~~---~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~--  299 (433)
T 3ivy_A          232 AK-------NPADDIVTQLIQADIDG---EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP--  299 (433)
T ss_dssp             --------------CHHHHHSCC--C---CCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC--
T ss_pred             hc-------CCCCcHHHHHHhhhcCC---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc--
Confidence            63       23568999999875432   3699999999999999999999999999999999999999999999963  


Q ss_pred             hcCCCcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCC
Q 047291          347 VGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPE  426 (511)
Q Consensus       347 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  426 (511)
                                        ++||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+
T Consensus       300 ------------------~a~i~E~LRl~p~~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~  360 (433)
T 3ivy_A          300 ------------------ETAADEIVRWATPVTAF-QRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNIL  360 (433)
T ss_dssp             ------------------TTHHHHHHHHHCSBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTT
T ss_pred             ------------------cchhHHHhhhCcchhce-eeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCC
Confidence                              78999999999999985 69999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCCCCCCCcceeecC-CCCCCCCCchHHHHHHHHHHHHhHhhcc-cccCCCCCCCCCCCccccCceecccCceeE
Q 047291          427 RFYNNPVNFMGEDFHYIPFG-AGRRGCPGTLFGVTSAEGVVANLLYWFD-WKLPGDTVGEDLDMTETFGLTVFKKIPLYL  504 (511)
Q Consensus       427 R~~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~A~~e~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (511)
                      ||.          ..++||| +|+|.|+|++||.+|++++++.|+++|+ ++++++..     +....  .......+.|
T Consensus       361 R~~----------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-----~~~~~--~~~g~~~lpv  423 (433)
T 3ivy_A          361 RNP----------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPE-----RLRSG--WLNGIKHWQV  423 (433)
T ss_dssp             CCS----------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCE-----ECCCS--SBCCEEECEE
T ss_pred             CCC----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCc-----eeccC--cccCcceeEE
Confidence            983          2579999 9999999999999999999999999999 99875421     11111  2233446667


Q ss_pred             EeeccC
Q 047291          505 VPVMYS  510 (511)
Q Consensus       505 ~~~~r~  510 (511)
                      ++++|.
T Consensus       424 ~~~~R~  429 (433)
T 3ivy_A          424 DYTGRC  429 (433)
T ss_dssp             ESCC--
T ss_pred             EEeccc
Confidence            777764


No 53 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=6.5e-59  Score=447.18  Aligned_cols=368  Identities=17%  Similarity=0.226  Sum_probs=293.7

Q ss_pred             CCCCCCCCCCCcccccccCCCCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCCCccchh--
Q 047291           44 HNLPPCPPKLPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAAD--  120 (511)
Q Consensus        44 ~~~~pgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~--  120 (511)
                      ....+||.. |+ .  ..+..+++.++.+++ +||||+++++ ++.+.++|++|+++++|+.++  .|+.++......  
T Consensus         6 ~~~~~g~~~-~~-~--~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~   78 (413)
T 2z36_A            6 ADELAGLEL-PV-E--RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLF   78 (413)
T ss_dssp             ----CCCEE-CC-C--CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCS
T ss_pred             HHHhccccC-CC-C--cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccc
Confidence            344566652 43 2  235678999999997 8899999997 889999999999999999863  455543221110  


Q ss_pred             ---hhcc----CCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHH-HH
Q 047291          121 ---IFLY----GCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLL-TV  192 (511)
Q Consensus       121 ---~~~~----~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~-~~  192 (511)
                         ....    ++.+.++..+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+.+.  +++++|+.+.+. .+
T Consensus        79 ~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~~~~d~~~~~~~~~  155 (413)
T 2z36_A           79 TLDAATLQQLRSQPPLMLGMDGAEHSAARRP-VIGEFTVKRLAALRPRIQDIVDHFIDDMLAT--DQRPVDLVQALSLPV  155 (413)
T ss_dssp             SCCHHHHHHHTTSCCCGGGCCHHHHHHHHHH-HHGGGSHHHHHHHHHHHHHHHHHHHHHHTTC--SCSSEEHHHHTTTHH
T ss_pred             ccccccccccccccccccccCchHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCccHHHHHhhhh
Confidence               0111    12231556689999999999 5788999999999999999999999998641  256899987665 68


Q ss_pred             HHHhhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 047291          193 TNDTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERP  272 (511)
Q Consensus       193 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (511)
                      ++++++.+ ||.+.++.+.+......+    ..  .   .          . .+...++.+.+.+++.+.++++++.   
T Consensus       156 ~~~vi~~~-~G~~~~~~~~~~~~~~~~----~~--~---~----------~-~~~~~~~~~~~~~~~~~~i~~r~~~---  211 (413)
T 2z36_A          156 PSLVICEL-LGVPYTDHDFFQSRTTMM----VS--R---T----------S-MEDRRRAFAELRAYIDDLITRKESE---  211 (413)
T ss_dssp             HHHHHHHH-HTCCGGGHHHHHHHHHHT----TC--S---S----------C-HHHHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred             HHHHHHHH-hCCCHHHHHHHHHHHHHH----hc--c---c----------C-cHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence            99999984 899876544443332211    10  0   0          0 0345667788889999999888743   


Q ss_pred             CCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCc
Q 047291          273 DDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLK  352 (511)
Q Consensus       273 ~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  352 (511)
                          ..+|+++.|+++..++   ..++++++.+++..+++||+|||+++++|++++|++||++|+||++|+         
T Consensus       212 ----~~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~---------  275 (413)
T 2z36_A          212 ----PGDDLFSRQIARQRQE---GTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP---------  275 (413)
T ss_dssp             ----CCSSHHHHHHHHHHHH---SCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------
T ss_pred             ----CCCCHHHHHHHhhcCC---CCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhCh---------
Confidence                2468999999864322   369999999999999999999999999999999999999999999984         


Q ss_pred             CCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCC
Q 047291          353 VEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNP  432 (511)
Q Consensus       353 ~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~  432 (511)
                               .|++|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.   
T Consensus       276 ---------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---  343 (413)
T 2z36_A          276 ---------GRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA---  343 (413)
T ss_dssp             ---------GGHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC---
T ss_pred             ---------HHHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC---
Confidence                     37999999999999999966679999999999999999999999999999999999999999999983   


Q ss_pred             CCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCC
Q 047291          433 VNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGD  480 (511)
Q Consensus       433 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~  480 (511)
                             ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus       344 -------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~  385 (413)
T 2z36_A          344 -------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVP  385 (413)
T ss_dssp             -------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred             -------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence                   2479999999999999999999999999999999 5898764


No 54 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=3e-59  Score=451.24  Aligned_cols=381  Identities=15%  Similarity=0.164  Sum_probs=296.6

Q ss_pred             CCCCCcHHHHHHHHhhCCcEEEeec--CcCEEEecCHHHHHHHHHhcCcccccCCCc--------c-chh-----hhccC
Q 047291           62 LGNLPHRSLRALSKKYGPLMLIHWG--QTPTVIVSSADMAKEMMKTHDIIFSNRPKT--------T-AAD-----IFLYG  125 (511)
Q Consensus        62 ~~~~~~~~~~~~~~kyG~v~~~~~~--~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~--------~-~~~-----~~~~~  125 (511)
                      +..+++.++.+++ +||||+++++|  +.+.++|+||+++++|+.++  .|++++..        . ...     ....+
T Consensus        18 ~~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (425)
T 2z3t_A           18 DIADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVV   94 (425)
T ss_dssp             HHHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHH
T ss_pred             hhcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccc
Confidence            3457899999986 59999999987  78899999999999999864  56665431        1 000     00111


Q ss_pred             CceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccc
Q 047291          126 CIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGK  204 (511)
Q Consensus       126 ~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~  204 (511)
                      + ..++..+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+   . +++|+..++ ..+++++++.+ ||.
T Consensus        95 ~-~~l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~-g~~dl~~~~~~~~~~~vi~~~-~G~  167 (425)
T 2z3t_A           95 E-NWLVFLDPPHHTELRSL-LTTEFSPSIVTGLRPRIAELASALLDRLRA---Q-RRPDLVEGFAAPLPILVISAL-LGI  167 (425)
T ss_dssp             T-TCGGGCCHHHHHHHHHH-HHGGGSHHHHHHHHHHHHHHHHHHHHHHTT---S-SSCBHHHHTTTHHHHHHHHHH-HTC
T ss_pred             c-cccccCCchHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHh---c-CCccHHHHHHHHHHHHHHHHH-hCC
Confidence            1 23455679999999999 588999999999999999999999999865   2 379998755 78999999998 999


Q ss_pred             cccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHH
Q 047291          205 KANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDI  284 (511)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  284 (511)
                      +.++.+.+......+....      +.+| +.+     ...++..++.+.+.+++.+.++++++.       ..+|+++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~------~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~  228 (425)
T 2z3t_A          168 PEEDHTWLRANAVALQEAS------TTRA-RDG-----RGYARAEAASQEFTRYFRREVDRRGGD-------DRDDLLTL  228 (425)
T ss_dssp             CGGGHHHHHHHHHHHHTTC------TTCC-C--------HHHHHHHHHHHHHHHHHHHHCC--------------CHHHH
T ss_pred             CHHHHHHHHHHHHHHHhhc------cccC-CCH-----HHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHH
Confidence            8765555555444333211      1112 111     122345667777888888887766532       34689999


Q ss_pred             HHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhH
Q 047291          285 LLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYL  364 (511)
Q Consensus       285 ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l  364 (511)
                      |+++..+   ...++++++.+++..+++||+|||+++++|++++|++||++|+||++|+                  .|+
T Consensus       229 ll~~~~~---~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l  287 (425)
T 2z3t_A          229 LVRARDT---GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP------------------EST  287 (425)
T ss_dssp             HHHHHHT---TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGH
T ss_pred             HHHhhcc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------HhH
Confidence            9987543   2369999999999999999999999999999999999999999999984                  389


Q ss_pred             HHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceee
Q 047291          365 KCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIP  444 (511)
Q Consensus       365 ~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~  444 (511)
                      +|||+|+||++|+++ ..+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.          ..++|
T Consensus       288 ~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~  356 (425)
T 2z3t_A          288 PAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA----------ERQVG  356 (425)
T ss_dssp             HHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS----------SCCCT
T ss_pred             HHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC----------CCCCC
Confidence            999999999999999 5679999999999999999999999999999999999999999999995          25799


Q ss_pred             cCCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          445 FGAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       445 Fg~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      ||+|+|.|+|++||++|++++++.|+++| +++ .++..  . .+.  .+.+.++...+.|++.+.
T Consensus       357 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~--~-~~~--~~~~~~~~~~lpv~~~~~  416 (425)
T 2z3t_A          357 FGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHE--V-EYA--DDMVFHGPTRLLLDLPDA  416 (425)
T ss_dssp             TCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEE--E-EEC--SCSSBCCEEEEEECCC--
T ss_pred             CCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCc--c-ccc--cccccCCcceeeEEecch
Confidence            99999999999999999999999999999 899 65421  1 232  233456777777776654


No 55 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=1.8e-59  Score=451.16  Aligned_cols=376  Identities=18%  Similarity=0.213  Sum_probs=300.1

Q ss_pred             CCCCcHHHHHHHHhhCCcE-----EEeecCcCEEEecCHHHHHHHHHhcCcccccCCCcc-chh--hh-c-cCCceeEec
Q 047291           63 GNLPHRSLRALSKKYGPLM-----LIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTT-AAD--IF-L-YGCIDIAFS  132 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~-----~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~  132 (511)
                      ..+++.++.+++ +||||+     ++.+  .+.++|+||+++++|+.++ ..|++++... ...  .+ . .++ ..++.
T Consensus        24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-~~l~~   98 (414)
T 2uuq_A           24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDT-PPMVM   98 (414)
T ss_dssp             TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSS-CCGGG
T ss_pred             ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccc-ccccc
Confidence            467899999885 799999     8876  6799999999999999865 5576665432 111  21 1 222 33455


Q ss_pred             CCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHH-HHHHHHHHHhhhhhhccccccchhh
Q 047291          133 PYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLS-EMLLTVTNDTVGRCVFGKKANEESK  211 (511)
Q Consensus       133 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG~~~~~~~~  211 (511)
                      .+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+.+.    +++|+. ++++.+++++++. +||.+.++.+.
T Consensus        99 ~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~~~  172 (414)
T 2uuq_A           99 QDPPVHTEFRKL-VSRGFTPRQVETVEPTVRKFVVERLEKLRAN----GGGDIVTELFKPLPSMVVAH-YLGVPEEDWTQ  172 (414)
T ss_dssp             CCTTHHHHHHHH-HHTTSSHHHHHHHHHHHHHHHHHHHHHHHHT----TEEEHHHHTTTHHHHHHHHH-HTTCCGGGHHH
T ss_pred             CCchhHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccHHHHHHHHhHHHHHHH-HhCCCHHHHHH
Confidence            689999999999 5789999999999999999999999999762    469997 5668999999999 68998875555


Q ss_pred             HHHHHHHHHHhcccccccccc-ccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcc
Q 047291          212 FGTISRRLTTQLQAFSFGDVF-PALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQK  290 (511)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~-p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~  290 (511)
                      +......+...       ..+ |..          ....++...+.+++.+.++++++.       ..+|+++.|+++..
T Consensus       173 ~~~~~~~~~~~-------~~~~p~~----------~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~  228 (414)
T 2uuq_A          173 FDGWTQAIVAA-------NAVDGAT----------TGALDAVGSMMAYFTGLIERRRTE-------PADDAISHLVAAGV  228 (414)
T ss_dssp             HHHHHHHHHHH-------HHC---------------CCHHHHHHHHHHHHHHHHHHTTS-------CCSSHHHHHHHTTT
T ss_pred             HHHHHHHHHhh-------cccCCch----------hHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhccc
Confidence            55544433221       011 210          123456677888889999887642       24689999998753


Q ss_pred             ccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhh
Q 047291          291 DATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKE  370 (511)
Q Consensus       291 ~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  370 (511)
                      + .....++++++.+++..+++||+|||+++++|++++|++||++|+||++|+                  +|++|||+|
T Consensus       229 ~-~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E  289 (414)
T 2uuq_A          229 G-ADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------------------EGIPDAVEE  289 (414)
T ss_dssp             T-CTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHH
T ss_pred             c-cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHH
Confidence            1 012358999999999999999999999999999999999999999999984                  489999999


Q ss_pred             hcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCcceeecCCCC
Q 047291          371 SLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLW-DNPEEFIPERFYNNPVNFMGEDFHYIPFGAGR  449 (511)
Q Consensus       371 ~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~  449 (511)
                      +||++|+++ ..+|.+.+|++++||.||||+.|+++.+++|+||++| +||++|+||||.          ..++|||+|+
T Consensus       290 ~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~----------~~~~~FG~G~  358 (414)
T 2uuq_A          290 LLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP----------RNILTFSHGA  358 (414)
T ss_dssp             HHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC----------CSCCTTCSST
T ss_pred             HHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC----------CCCcCCCCCC
Confidence            999999999 5679999999999999999999999999999999999 999999999985          2579999999


Q ss_pred             CCCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          450 RGCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       450 r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      |.|+|++||++|++++++.|+++| ++++.++    ++.+.  .+.+.++..++.|++++|
T Consensus       359 r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~----~~~~~--~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          359 HHCLGAAAARMQCRVALTELLARCPDFEVAES----RIVWS--GGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG----GCEEC--CCSSBCCEEECEEEEC--
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhCcccEECCC----Ccccc--ccccccCcceeEEEecCC
Confidence            999999999999999999999999 6998732    22233  234456777888888776


No 56 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=6.8e-59  Score=446.68  Aligned_cols=374  Identities=20%  Similarity=0.265  Sum_probs=302.6

Q ss_pred             CCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCc--c----chh---hh--c---cCCc
Q 047291           62 LGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKT--T----AAD---IF--L---YGCI  127 (511)
Q Consensus        62 ~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~--~----~~~---~~--~---~~~~  127 (511)
                      +..+++.++.++ ++||||+++++++.+.++|++|+++++|+.++  .|++++..  .    ...   ..  .   ..+ 
T Consensus        12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   87 (404)
T 1z8o_A           12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFA-   87 (404)
T ss_dssp             GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHS-
T ss_pred             cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcc-
Confidence            456889999999 99999999999989999999999999999865  46555432  1    110   11  0   012 


Q ss_pred             eeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccc
Q 047291          128 DIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKA  206 (511)
Q Consensus       128 ~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~  206 (511)
                      ..++..+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+.+    ++++|+.+++ ..+++++++.+ ||.+.
T Consensus        88 ~~l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~  161 (404)
T 1z8o_A           88 TNMGTSDPPTHTRLRKL-VSQEFTVRRVEAMRPRVEQITAELLDEVGD----SGVVDIVDRFAHPLPIKVICEL-LGVDE  161 (404)
T ss_dssp             SSGGGCCTTHHHHHHHH-HHTTSCHHHHHHTHHHHHHHHHHHHHTSCS----SSEEEHHHHTTTHHHHHHHHHH-TTCCG
T ss_pred             cccccCCCcHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHhhhh----cCCcchHHHHhHHHHHHHHHHH-hCCCH
Confidence            23456689999999999 578999999999999999999999988753    5689998765 68999999984 99987


Q ss_pred             cchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHH
Q 047291          207 NEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILL  286 (511)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll  286 (511)
                      ++.+.+......+.. .   .    .|         . .+...++.+.+.+++.+.++++++.       ..+|+++.|+
T Consensus       162 ~~~~~~~~~~~~~~~-~---~----~p---------~-~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll  216 (404)
T 1z8o_A          162 KYRGEFGRWSSEILV-M---D----PE---------R-AEQRGQAAREVVNFILDLVERRRTE-------PGDDLLSALI  216 (404)
T ss_dssp             GGTTTHHHHHHHHHC-C---C----GG---------G-HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHhc-c---C----Ch---------h-HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHH
Confidence            655556555444322 0   0    01         1 2345677788889999999988753       2368999999


Q ss_pred             Hh-ccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHH
Q 047291          287 QV-QKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLK  365 (511)
Q Consensus       287 ~~-~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~  365 (511)
                      ++ ..+   ...++++++.+++..+++||+|||+++++|++++|++||++|+||++|+                  .|++
T Consensus       217 ~~~~~~---~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~  275 (404)
T 1z8o_A          217 RVQDDD---DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP------------------SALP  275 (404)
T ss_dssp             HCEETT---TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHH
T ss_pred             hhhccc---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HhHH
Confidence            86 332   1359999999999999999999999999999999999999999999984                  3799


Q ss_pred             HHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeec
Q 047291          366 CVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPF  445 (511)
Q Consensus       366 a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~F  445 (511)
                      |||+|+||++|+++ ..+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.          ..++||
T Consensus       276 a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~----------~~~~~F  344 (404)
T 1z8o_A          276 NAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT----------RGHLSF  344 (404)
T ss_dssp             HHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTT
T ss_pred             HHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC----------CCccCC
Confidence            99999999999999 5679999999999999999999999999999999999999999999983          257999


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEe
Q 047291          446 GAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVP  506 (511)
Q Consensus       446 g~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (511)
                      |+|+|.|+|++||.+|++++++.|+++| ++++.++.  .++.+..  +.+.+....+.|+.
T Consensus       345 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~--~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          345 GQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDA--DDVVWRR--SLLLRGIDHLPVRL  402 (404)
T ss_dssp             CSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCCCC--CSSSCCCSCCEEET
T ss_pred             CCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCC--Ccceecc--ccccCCcceeEEEe
Confidence            9999999999999999999999999999 59987542  2233433  34456677777765


No 57 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=2.8e-60  Score=470.60  Aligned_cols=407  Identities=14%  Similarity=0.155  Sum_probs=295.8

Q ss_pred             CCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHHhhCC-cEEEeecCcCE-------EEecCHHHHHHHHHhcC-
Q 047291           42 GNHNLPPCPPKLPIIGNLHQL-----GNLPHRSLRALSKKYGP-LMLIHWGQTPT-------VIVSSADMAKEMMKTHD-  107 (511)
Q Consensus        42 ~~~~~~pgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~~p~~i~~i~~~~~-  107 (511)
                      .+.+.||||++||++|+++.+     ..+++.++.++++|||+ ||++++++.++       +++.+++..+.++.... 
T Consensus        25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v  104 (495)
T 3dsk_A           25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKV  104 (495)
T ss_dssp             CCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTE
T ss_pred             CCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccc
Confidence            467789999999999998766     47889999999999999 99999988887       67777777666664321 


Q ss_pred             ---cccccCCCccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCcee
Q 047291          108 ---IIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVN  184 (511)
Q Consensus       108 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd  184 (511)
                         ..+..... .....++......+++.+|+.|+++|+. +.+.|++.. +.+.+.+.+.++++++.|.+...+++++|
T Consensus       105 ~k~~~~~~~~~-~~~~l~g~~~~~~~~~~~g~~h~~~R~~-~~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~vd  181 (495)
T 3dsk_A          105 EKKDLLTGTYM-PSTELTGGYRILSYLDPSEPKHEKLKNL-LFFLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGKAD  181 (495)
T ss_dssp             ECSSCTTSSSC-CCGGGGTTCCCGGGCCTTSHHHHHHHHH-HHHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSSEE
T ss_pred             cccccccccCC-CCccccCCCcceeeeCCCchHHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence               11111111 1112222112234455689999999999 567787754 88999999999999999977544457899


Q ss_pred             HHHHHHHHHHHhhhhhhccccccchh---hHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHH
Q 047291          185 LSEMLLTVTNDTVGRCVFGKKANEES---KFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDD  261 (511)
Q Consensus       185 l~~~~~~~~~~~~~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~  261 (511)
                      +.++++.+++++++.++||.++...+   .+......+............+|                       .++..
T Consensus       182 l~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p-----------------------~~~~~  238 (495)
T 3dsk_A          182 FGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVLFNLHPLLSIGLP-----------------------RVIEE  238 (495)
T ss_dssp             SHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSSC-----------------------HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHhhhhHhHhccH-----------------------HHHHH
Confidence            99999999999999999999876432   23333332221110000000111                       01111


Q ss_pred             HHHHHHhccCC-------CCccccccHHHHHHHhccccccccCCChHHHHHHHHHHH-hhchhhHHHHHHHHHHHHhc-C
Q 047291          262 VIAEHRNLERP-------DDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMF-VGGTDSTSTTMEWAMAELVK-H  332 (511)
Q Consensus       262 ~i~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~  332 (511)
                      ++.++++....       ...+.-.+.++.+++...+    .++++++++.+++.++ +||++||+.+++|++++|+. |
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~  314 (495)
T 3dsk_A          239 PLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEADK----LGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAG  314 (495)
T ss_dssp             HHHSSSCCCGGGGHHHHHHHHHHHHHHCHHHHHHHHH----TTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhhcccchhhhhhHHHHHHHHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC
Confidence            11111100000       0000001222344444322    4699999998776665 99999999999999999995 9


Q ss_pred             chHHHHHHHHHHHHhcCC-CcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCccee----cCeeeCCCcEEEeeh
Q 047291          333 PSTMKKAQEEVRRVVGKK-LKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM----GGYEIPAKTRVFANA  407 (511)
Q Consensus       333 p~~~~~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~  407 (511)
                      |++|++||+|++++++++ +.++.+++++||||+|||+|+||++|+++... |.+.+|+++    +||.||||+.|+++.
T Consensus       315 P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~-r~a~~d~~l~~~~~g~~IpkG~~v~~~~  393 (495)
T 3dsk_A          315 HQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEMLYGYQ  393 (495)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEH
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccc-eeecCCeEeccCCCceEECCCCEEEecc
Confidence            999999999999998764 56899999999999999999999999999987 778999999    499999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCCcCCCCCCCC------CCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhcccccCC
Q 047291          408 WAIQRDPKLWDNPEEFIPERFYNNPVNFM------GEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWFDWKLPG  479 (511)
Q Consensus       408 ~~~~~d~~~~~~p~~F~p~R~~~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~  479 (511)
                      +.+|+||++|+||++|+|+||++.+....      +....++|||+|+|.|+|++||.+|++++++.|+++|++...+
T Consensus       394 ~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  471 (495)
T 3dsk_A          394 PLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE  471 (495)
T ss_dssp             HHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             HHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCC
Confidence            99999999999999999999997521100      1112345555666999999999999999999999999987643


No 58 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=5.9e-59  Score=452.63  Aligned_cols=364  Identities=19%  Similarity=0.262  Sum_probs=291.1

Q ss_pred             CcHHHHHHHHhhCCcE--EEe-ecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhc--------c-C---CceeE
Q 047291           66 PHRSLRALSKKYGPLM--LIH-WGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFL--------Y-G---CIDIA  130 (511)
Q Consensus        66 ~~~~~~~~~~kyG~v~--~~~-~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~--------~-~---~~~~~  130 (511)
                      ++..+.++ ++||||+  ++. +++.++++|++++++++|++++ ..|++++.........        . +   ..+.+
T Consensus        47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l  124 (450)
T 3tkt_A           47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL  124 (450)
T ss_dssp             HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred             chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence            77888888 6899999  998 7889999999999999999765 5666665432211100        0 0   11356


Q ss_pred             ecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccch
Q 047291          131 FSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEE  209 (511)
Q Consensus       131 ~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~  209 (511)
                      ++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+.   ++++|+.+++ ..+++++++.+ ||.+..+.
T Consensus       125 ~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~---~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~~  199 (450)
T 3tkt_A          125 VQMDAPKHPKLRRL-TQDWFMPKNLARLDGEIRKIANEAIDRMLGA---GEEGDFMALVAAPYPLHVVMQI-LGVPPEDE  199 (450)
T ss_dssp             GGCCTTHHHHHHHH-HHTTTSHHHHGGGHHHHHHHHHHHHHHHHHT---CSEEEHHHHTTTHHHHHHHHHH-TTCCGGGH
T ss_pred             ccCCCHHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEeeHHHHHHHHHHHHHHHH-cCCChhHH
Confidence            67789999999999 6899999999999999999999999999762   6789998888 69999999985 89876554


Q ss_pred             hhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhc
Q 047291          210 SKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQ  289 (511)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~  289 (511)
                      +.+......+...    ......++..++.......+...++.+.+.+++.++++++++.       ..+|+++.|+++.
T Consensus       200 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~  268 (450)
T 3tkt_A          200 PKMLFLTQQMFGG----QDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN-------PTDDVATVIANAV  268 (450)
T ss_dssp             HHHHHHHHTTSCC----C----------------HHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTCE
T ss_pred             HHHHHHHHHHhcc----ccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhcc
Confidence            4444443332211    1112222222221112234556778888999999999988753       2468999999875


Q ss_pred             cccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHh
Q 047291          290 KDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIK  369 (511)
Q Consensus       290 ~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~  369 (511)
                      .++   ..++++++.+++..+++||+|||+++++|++++|++||++|+||++|+                  +|++|||+
T Consensus       269 ~~~---~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~  327 (450)
T 3tkt_A          269 VDG---EPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR------------------NLLPGIVE  327 (450)
T ss_dssp             ETT---EECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHH
T ss_pred             ccC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH------------------HHHHHHHH
Confidence            432   369999999999999999999999999999999999999999999984                  48999999


Q ss_pred             hhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCC
Q 047291          370 ESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGR  449 (511)
Q Consensus       370 E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~  449 (511)
                      |+||++|+++. .+|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||.          ..++|||+|+
T Consensus       328 E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~----------~~~l~FG~G~  396 (450)
T 3tkt_A          328 EAIRWTTPVQH-FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA----------NRHLAFGAGS  396 (450)
T ss_dssp             HHHHHHCSBCE-EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT----------TCSSTTCCST
T ss_pred             HHHHhCCCccC-cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC----------CCCCCCCCcC
Confidence            99999999995 569999999999999999999999999999999999999999999942          2579999999


Q ss_pred             CCCCCchHHHHHHHHHHHHhHhhcc-cccCC
Q 047291          450 RGCPGTLFGVTSAEGVVANLLYWFD-WKLPG  479 (511)
Q Consensus       450 r~C~G~~~A~~e~~~~la~ll~~f~-~~~~~  479 (511)
                      |.|+|++||.+|++++++.|+++|+ +++.+
T Consensus       397 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  427 (450)
T 3tkt_A          397 HQCLGLHLARLEMRVLLDVLLDRVDSLELAG  427 (450)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHEEEEEESS
T ss_pred             ccCccHHHHHHHHHHHHHHHHHhCCCceeCC
Confidence            9999999999999999999999998 77763


No 59 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=3e-58  Score=440.52  Aligned_cols=368  Identities=18%  Similarity=0.232  Sum_probs=294.4

Q ss_pred             CCCCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCCCccc-hhhhccCCcee-EecCCc---
Q 047291           62 LGNLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA-ADIFLYGCIDI-AFSPYG---  135 (511)
Q Consensus        62 ~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~---  135 (511)
                      +..+++.++.++ ++||||+++++ ++.+.++|+||+++++|+.++  .|.+++.... ..... .+.+. +++.+|   
T Consensus        24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~   99 (404)
T 2xbk_A           24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISDADAE   99 (404)
T ss_dssp             BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBCSCHH
T ss_pred             cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeCCCCC
Confidence            456799999999 89999999997 789999999999999999864  3554433221 11111 12231 455678   


Q ss_pred             ---hhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhh
Q 047291          136 ---EYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESK  211 (511)
Q Consensus       136 ---~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~  211 (511)
                         +.|+++|+. +.+.|++..++.+.+.+.+.++++++.+..   +++++|+.+++ ..+++++++. +||.+.++.+.
T Consensus       100 ~~~~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~  174 (404)
T 2xbk_A          100 SGRRQHAETRRL-LTPLFSARRVLEMQPKVEEAADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQRRAE  174 (404)
T ss_dssp             HHHHHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGGHHH
T ss_pred             CCCchHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHHHHH
Confidence               999999999 678999999999999999999999999975   35689998766 5699999997 79998765444


Q ss_pred             HHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccc
Q 047291          212 FGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKD  291 (511)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~  291 (511)
                      +......+...      .  .|            ++..++.+.+.+++.+.++++++.       ..+|+++.| +    
T Consensus       175 ~~~~~~~~~~~------~--~~------------p~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~l-~----  222 (404)
T 2xbk_A          175 LTTLLAGIAKL------D--DR------------EGAVRAQDDLFGYVAGLVEHKRAE-------PGPDIISRL-N----  222 (404)
T ss_dssp             HHHHHHHHTBS------S--CH------------HHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHH-H----
T ss_pred             HHHHHHHHHhc------c--Cc------------HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHh-h----
Confidence            44443322110      0  00            135567778888999999988753       235888888 2    


Q ss_pred             cccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhh
Q 047291          292 ATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKES  371 (511)
Q Consensus       292 ~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~  371 (511)
                      .  . .++++++..++..+++||+|||+.+++|++++|++||++|+||++|++                  |++|||+|+
T Consensus       223 ~--~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~  281 (404)
T 2xbk_A          223 D--G-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------------VMARAVEEV  281 (404)
T ss_dssp             S--S-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH------------------HHHHHHHHH
T ss_pred             c--C-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHH
Confidence            1  1 599999999999999999999999999999999999999999999863                  799999999


Q ss_pred             cCCCCCCc-cccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCC
Q 047291          372 LRLHAPAP-LLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRR  450 (511)
Q Consensus       372 lRl~~~~~-~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r  450 (511)
                      ||++|+++ ...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.          ..++|||+|+|
T Consensus       282 lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r  351 (404)
T 2xbk_A          282 LRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP----------NPHLTFGHGIW  351 (404)
T ss_dssp             HHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS----------CCCCTTEETTE
T ss_pred             HHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC----------CCCCCCCCCCc
Confidence            99999999 55679999999999999999999999999999999999999999999983          25799999999


Q ss_pred             CCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEE
Q 047291          451 GCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLV  505 (511)
Q Consensus       451 ~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (511)
                      .|+|++||++|++++++.|+++| ++++.++.  +++.+..  +.+.+....+.|+
T Consensus       352 ~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~~--~~~~~~~~~lpv~  403 (404)
T 2xbk_A          352 HCIGAPLARLELRTMFTKLFTRLPELRPELPV--EQLRLKE--GQLSGGFAELRVV  403 (404)
T ss_dssp             ECTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCBCS--SBTTCCBSCCEEE
T ss_pred             CCCcHHHHHHHHHHHHHHHHHhCCcceecCCC--Ccceecc--CcccCCcceeeee
Confidence            99999999999999999999999 79987542  2233333  3333455555543


No 60 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=2.4e-58  Score=446.02  Aligned_cols=358  Identities=13%  Similarity=0.152  Sum_probs=295.6

Q ss_pred             CCCcHHHHHHHHhhCCcEEEeec-------CcCEEEecCHHHHHHHHHhcCcccccCCCc--c-chhhhccCCceeEecC
Q 047291           64 NLPHRSLRALSKKYGPLMLIHWG-------QTPTVIVSSADMAKEMMKTHDIIFSNRPKT--T-AADIFLYGCIDIAFSP  133 (511)
Q Consensus        64 ~~~~~~~~~~~~kyG~v~~~~~~-------~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~  133 (511)
                      .+++.++.+++ +||||+++.++       +.++++|+||+++++|+.++ ..|++++..  . ....+...+ ..++..
T Consensus        44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~-~~l~~~  120 (435)
T 2wm5_A           44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYF-GSMIVL  120 (435)
T ss_dssp             HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHH-HGGGGC
T ss_pred             CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhc-cccccC
Confidence            46788888985 79999999986       67899999999999999865 456666431  1 111111012 334556


Q ss_pred             CchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhH
Q 047291          134 YGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKF  212 (511)
Q Consensus       134 ~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~  212 (511)
                      +|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+.+. +++.++|+.+++ ..+++++++.+ ||.+.++.+.+
T Consensus       121 dg~~h~~~R~~-l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~~~~  197 (435)
T 2wm5_A          121 DDPRHQRLRSI-VSRAFTPKVVARIEAAVRDRAHRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MGIPKADHQRI  197 (435)
T ss_dssp             CTTHHHHHHHH-HHHTCCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHH
T ss_pred             CcHHHHHHHHH-hHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence            79999999999 5789999999999999999999999999864 224589999876 78999999999 99988765556


Q ss_pred             HHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccc
Q 047291          213 GTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDA  292 (511)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~  292 (511)
                      ......+....        .|.+  .    ...++..++.+.+.+++.+.++++++.       ..+|+++.|+++..+ 
T Consensus       198 ~~~~~~~~~~~--------~p~~--~----~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~-  255 (435)
T 2wm5_A          198 FHWTNVILGFG--------DPDL--A----TDFDEFMQVSADIGAYATALAEDRRVN-------HHDDLTSSLVEAEVD-  255 (435)
T ss_dssp             HHHHHHHHHTT--------CTTS--C----CCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBT-
T ss_pred             HHHHHHHhccC--------Ccch--h----hhHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCHHHHHHhhhcc-
Confidence            55554443221        1221  1    122456677888999999999988753       246899999987543 


Q ss_pred             ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhc
Q 047291          293 TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESL  372 (511)
Q Consensus       293 ~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  372 (511)
                        ...++++++..++..+++||+|||+.+++|++++|++||++|++|++|++                 +|++|||+|+|
T Consensus       256 --~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~~l~a~i~E~l  316 (435)
T 2wm5_A          256 --GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-----------------GLAPTAVEEIV  316 (435)
T ss_dssp             --TBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-----------------HHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-----------------hHHHHHHHHHH
Confidence              23699999999999999999999999999999999999999999999975                 38999999999


Q ss_pred             CCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCC-CCCC
Q 047291          373 RLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGA-GRRG  451 (511)
Q Consensus       373 Rl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~-G~r~  451 (511)
                      |++|+++ ..+|.+.+|++++||.||||+.|+++.+++|+||++|+||++||||||          +..++|||+ |+|.
T Consensus       317 Rl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~----------~~~~lpFG~~G~r~  385 (435)
T 2wm5_A          317 RWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN----------PNPHLGFGGGGAHF  385 (435)
T ss_dssp             HHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC----------SCCCCTTCSSSTTC
T ss_pred             hhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC----------CCCCCCCCCCCCCC
Confidence            9999999 567999999999999999999999999999999999999999999993          135899999 9999


Q ss_pred             CCCchHHHHHHHHHHHHhHhhcc-cccCC
Q 047291          452 CPGTLFGVTSAEGVVANLLYWFD-WKLPG  479 (511)
Q Consensus       452 C~G~~~A~~e~~~~la~ll~~f~-~~~~~  479 (511)
                      |+|++||.+|++++++.|+++|+ +++.+
T Consensus       386 C~G~~lA~~e~~~~la~ll~~f~~~~l~~  414 (435)
T 2wm5_A          386 CLGANLARREIRVAFDELRRQMPDVVATE  414 (435)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEECS
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCCccEECC
Confidence            99999999999999999999997 99875


No 61 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=1.6e-58  Score=446.61  Aligned_cols=379  Identities=15%  Similarity=0.160  Sum_probs=299.2

Q ss_pred             CCCCcHHHHHHHHhhC-CcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCchhHHHH
Q 047291           63 GNLPHRSLRALSKKYG-PLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREI  141 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (511)
                      ..+++.++.++++++| ||+++..++ +.++|+||+++++|++ +...|++++.......... +...+++.+|+.|+++
T Consensus        37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~-~~~~~~~~dg~~h~~~  113 (421)
T 3lxh_A           37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEA-YDMVPTKLDPPEHTPY  113 (421)
T ss_dssp             GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHH-CCCTTTTCCTTTHHHH
T ss_pred             hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccc-cccCCccCCcHHHHHH
Confidence            4578999999987766 899998776 5899999999999995 4456666553222111111 1234566789999999


Q ss_pred             HHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhHHHHHHHHH
Q 047291          142 RRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKFGTISRRLT  220 (511)
Q Consensus       142 R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~  220 (511)
                      |+. +.+.|++..++.+.+.+.+.++++++.+..    ++.+|+...+ ..++.++++. +||.+..+.+.+......+.
T Consensus       114 R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~~~~~~~~  187 (421)
T 3lxh_A          114 RKA-IDKGLNLAEIRKLEDQIRTIAVEIIEGFAD----RGHCEFGSEFSTVFPVRVFLA-LAGLPVEDATKLGLLANEMT  187 (421)
T ss_dssp             HHH-HHHHHSHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHHHHHHHHH
T ss_pred             HHH-HhhhcCHHHHHHHHHHHHHHHHHHHHHHhh----cCCeehHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHh
Confidence            999 688999999999999999999999998764    3579987665 5577777765 58988766555555554443


Q ss_pred             HhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCCh
Q 047291          221 TQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQ  300 (511)
Q Consensus       221 ~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~  300 (511)
                      ...      ..+|.        ...+...++.+.+.+++.+.++++++.       ..+|+++.|+++..++   .++++
T Consensus       188 ~~~------~~~p~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~~---~~l~~  243 (421)
T 3lxh_A          188 RPS------GNTPE--------EQGRSLEAANKGFFEYVAPIIAARRGG-------SGTDLITRILNVEIDG---KPMPD  243 (421)
T ss_dssp             SCC------CSSHH--------HHHHHHHHHHHHHHHHHHHHHHHHTTC-------CCCSHHHHHHTSCBTT---BCCCH
T ss_pred             ccc------cCCCc--------hhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhhccC---CCCCH
Confidence            211      11111        113456778888999999999988743       4568999999875432   36999


Q ss_pred             HHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCcc
Q 047291          301 ENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPL  380 (511)
Q Consensus       301 ~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~  380 (511)
                      ++++.+++.+++||+|||+++++|++++|++||++|++|++|++                  |++|||+|+||++|++ .
T Consensus       244 ~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~-~  304 (421)
T 3lxh_A          244 DRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------KLQRGVEELFRRFAVV-S  304 (421)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------HHHHHHHHHHHHCCCB-E
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhcCcc-C
Confidence            99999999999999999999999999999999999999999975                  7899999999999999 4


Q ss_pred             ccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHH
Q 047291          381 LVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVT  460 (511)
Q Consensus       381 ~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~  460 (511)
                       .+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|+||          +..++|||+|+|.|+|++||.+
T Consensus       305 -~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~C~G~~lA~~  373 (421)
T 3lxh_A          305 -DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR----------DVTHSTFAQGPHRCAGMHLARL  373 (421)
T ss_dssp             -EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHHHHH
T ss_pred             -CceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC----------CCCCCCCCCcCccCcCHHHHHH
Confidence             56999999999999999999999999999999999999999999994          3478999999999999999999


Q ss_pred             HHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          461 SAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       461 e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      |++++++.|+++| ++++.++..   ..+..  +. .+....+.|++++|.
T Consensus       374 e~~~~l~~ll~~fp~~~l~~~~~---~~~~~--~~-~~~~~~lpv~~~p~~  418 (421)
T 3lxh_A          374 EVTVMLQEWLARIPEFRLKDRAV---PIYHS--GI-VAAVENIPLEWEPQR  418 (421)
T ss_dssp             HHHHHHHHHHHHCCCCEECTTCC---CEEEC--SS-BCEEECCEEECCCC-
T ss_pred             HHHHHHHHHHHhCCCcEECCCCC---ceecc--cc-ccCceeeeEEEeccc
Confidence            9999999999999 999986532   22322  22 233345666666653


No 62 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=5.7e-59  Score=447.11  Aligned_cols=373  Identities=18%  Similarity=0.210  Sum_probs=296.2

Q ss_pred             CCCCcHHHHHHHHhhCCcEEEeecC--cCEEEecCHHHHHHHHHhcCcccccCCCccchhhhc--cCC-ceeEecCCchh
Q 047291           63 GNLPHRSLRALSKKYGPLMLIHWGQ--TPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFL--YGC-IDIAFSPYGEY  137 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~~~~~~~--~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~  137 (511)
                      ..+|+..+.++++ ||||+++...|  .+.++|++++++++|+++. ..|++++.........  ... .+.+++.+|+.
T Consensus        36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  113 (415)
T 3mgx_A           36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ  113 (415)
T ss_dssp             STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred             cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHH
Confidence            4578999999886 99999997555  7899999999999999654 4566554322211100  001 24456778999


Q ss_pred             HHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhHHHHH
Q 047291          138 WREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKFGTIS  216 (511)
Q Consensus       138 ~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~  216 (511)
                      |+++|+. +.+.|++..++.+.+.+.+.++++++.+.+    ++++|+.+++ ..+++++++. +||.+..+.+.+....
T Consensus       114 h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~~~  187 (415)
T 3mgx_A          114 HRKLRKL-VGPLLSRAAARKLAERVRIEVGDVLGRVLD----GEVCDAATAIGPRIPAAVVCE-ILGVPAEDEDMLIDLT  187 (415)
T ss_dssp             HHHHHHH-HGGGSSHHHHHHSHHHHHHHHHHHTTTSSS----SSCEESTTTTTTHHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred             HHHHHHH-hHhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHH
Confidence            9999999 689999999999999999999999988754    3479999887 6799999998 5898765544554444


Q ss_pred             HHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccccccc
Q 047291          217 RRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKH  296 (511)
Q Consensus       217 ~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~  296 (511)
                      ..+....    .....|            ....++.+.+.+++.+.++++++.       ..+|+++.|+++.       
T Consensus       188 ~~~~~~~----~~~~~~------------~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~ll~~~-------  237 (415)
T 3mgx_A          188 NHAFGGE----DELFDG------------MTPRQAHTEILVYFDELITARRKE-------PGDDLVSTLVTDD-------  237 (415)
T ss_dssp             HHHTSCC----C----C------------CCHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCT-------
T ss_pred             HHHHccc----Ccccch------------HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhCC-------
Confidence            4332211    000011            012366778889999999988753       3468999999753       


Q ss_pred             CCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCC
Q 047291          297 ELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHA  376 (511)
Q Consensus       297 ~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~  376 (511)
                      +++++++..++..+++||+|||+++++|++++|++||++|++|++|+                  ||++|||+|+||++|
T Consensus       238 ~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~p  299 (415)
T 3mgx_A          238 DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------------------ADVDTVVEEVLRWTS  299 (415)
T ss_dssp             TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS------------------SCHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHHhcC
Confidence            58999999999999999999999999999999999999999999984                  899999999999999


Q ss_pred             CCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCch
Q 047291          377 PAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTL  456 (511)
Q Consensus       377 ~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  456 (511)
                      +++. .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|||+||.          ..++|||+|+|.|+|++
T Consensus       300 p~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~----------~~~l~FG~G~r~C~G~~  368 (415)
T 3mgx_A          300 PAMH-VLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP----------NRHITFGHGMHHCLGSA  368 (415)
T ss_dssp             CBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCGGGCCTTHH
T ss_pred             cccc-cceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC----------CCCCCCCCCCccCcCHH
Confidence            9996 469999999999999999999999999999999999999999999973          25799999999999999


Q ss_pred             HHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeecc
Q 047291          457 FGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMY  509 (511)
Q Consensus       457 ~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  509 (511)
                      ||.+|++++++.|+++| +++++++.     .+..  +...+....+.|+.++|
T Consensus       369 lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~~~--~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          369 LARIELSVVLRVLAERVSRVDLEREP-----AWLR--AIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             HHHHHHHHHHHHHHHHEEEEEECSCC-----EECS--CSSBCCEEECEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCCccCCCc-----cccc--CCcccCceeeeEEEecC
Confidence            99999999999999999 89987432     1221  22234445666666665


No 63 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=9.3e-59  Score=445.38  Aligned_cols=353  Identities=14%  Similarity=0.157  Sum_probs=290.4

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCchhHHH
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWRE  140 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (511)
                      .+..+++.++.+++++ |||+++..++ +.++|+||+++++|++++ ..|++++......... .....+++.+|+.|++
T Consensus        21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~h~~   96 (396)
T 3oft_A           21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGK-VMQFIPLQQDGAEHKA   96 (396)
T ss_dssp             TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHH-HHCCTTTTCCHHHHHH
T ss_pred             hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCcccc-ccccCccccCCcHHHH
Confidence            3457899999999999 9999998874 589999999999999654 4566655322111111 1123456678999999


Q ss_pred             HHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhHHHHHHHH
Q 047291          141 IRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKFGTISRRL  219 (511)
Q Consensus       141 ~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~  219 (511)
                      +|+. +.+.|++..++.+.+.+.+.++++++.+.+    ++.+|+...+ ..++.++++. +||.+..+.+.+......+
T Consensus        97 ~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~~~~~~~  170 (396)
T 3oft_A           97 FRTP-VMKGLASRFVVALEPKVQAVARKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPLEDRPRLRQLGVQL  170 (396)
T ss_dssp             HHHH-HHHHTCHHHHHHHHHHHHHHHHHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCGGGHHHHHHHHHHH
T ss_pred             HHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHH
Confidence            9999 578999999999999999999999999875    3478987666 4566666665 6898765555554444333


Q ss_pred             HHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCC
Q 047291          220 TTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELS  299 (511)
Q Consensus       220 ~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~  299 (511)
                      ....                    ......++.+.+.+++.+.++++++.       ..+|+++.|+++..++   .+++
T Consensus       171 ~~~~--------------------~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~~---~~l~  220 (396)
T 3oft_A          171 TRPD--------------------GSMTVEQLKQAADDYLWPFIEKRMAQ-------PGDDLFSRILSEPVGG---RPWT  220 (396)
T ss_dssp             HSCC--------------------SSCCHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTSCBTT---BCCC
T ss_pred             hCCC--------------------CHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhccC---CCCC
Confidence            2110                    01235677888899999999988754       3468999999875432   3699


Q ss_pred             hHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCc
Q 047291          300 QENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAP  379 (511)
Q Consensus       300 ~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~  379 (511)
                      +++++.++..+++||+|||+++++|++++|++||++|+||++|++                  |++|||+|+||++|++ 
T Consensus       221 ~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~-  281 (396)
T 3oft_A          221 VDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD------------------LIPAAADELMRRYPTV-  281 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHCCCB-
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHHHhcCcc-
Confidence            999999999999999999999999999999999999999999953                  7999999999999999 


Q ss_pred             cccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHH
Q 047291          380 LLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGV  459 (511)
Q Consensus       380 ~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~  459 (511)
                      . .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|+||+.        +..++|||+|+|.|+|++||.
T Consensus       282 ~-~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~--------~~~~~~FG~G~r~C~G~~lA~  352 (396)
T 3oft_A          282 A-VSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA--------PIRHTTMGVGAHRCVGAGLAR  352 (396)
T ss_dssp             E-EEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC--------GGGSSTTCCGGGCCTTHHHHH
T ss_pred             c-CceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC--------CCCcccCCCCCccCcCHHHHH
Confidence            4 5699999999999999999999999999999999999999999999973        357899999999999999999


Q ss_pred             HHHHHHHHHhHhhc-ccccCCCC
Q 047291          460 TSAEGVVANLLYWF-DWKLPGDT  481 (511)
Q Consensus       460 ~e~~~~la~ll~~f-~~~~~~~~  481 (511)
                      +|++++++.|+++| +++++++.
T Consensus       353 ~e~~~~l~~ll~~~~~~~l~~~~  375 (396)
T 3oft_A          353 MEVIVFLREWLGGMPEFALAPDK  375 (396)
T ss_dssp             HHHHHHHHHHHHHSCCEEECSSS
T ss_pred             HHHHHHHHHHHHhCCCceECCCC
Confidence            99999999999999 99998653


No 64 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=5.6e-59  Score=458.98  Aligned_cols=406  Identities=15%  Similarity=0.197  Sum_probs=292.6

Q ss_pred             CCCCCCCCCCCCCCcccccccC-----CC-CCcHHHHHHHHhhCC-cEEEeec-------CcCEEEecCHHHHHHHHHh-
Q 047291           41 GGNHNLPPCPPKLPIIGNLHQL-----GN-LPHRSLRALSKKYGP-LMLIHWG-------QTPTVIVSSADMAKEMMKT-  105 (511)
Q Consensus        41 ~~~~~~~pgp~~~p~iG~~~~~-----~~-~~~~~~~~~~~kyG~-v~~~~~~-------~~~~vvv~~p~~i~~i~~~-  105 (511)
                      ..+++.+|||+++|++|++..+     .. +++.++.++++|||+ ||+++++       +...+++.+.+..+.++.. 
T Consensus         5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~   84 (473)
T 3dan_A            5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS   84 (473)
T ss_dssp             GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred             CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence            3577889999999999998765     45 788999999999999 9999986       3455556666555455431 


Q ss_pred             ---cCcccccCCCccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCc
Q 047291          106 ---HDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGAS  182 (511)
Q Consensus       106 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~  182 (511)
                         +...+..... ......+......++..+++.|+++|+. +.+.|+++ ++.+.+.+.+.++++++.|.....++++
T Consensus        85 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~h~~~R~~-~~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~~  161 (473)
T 3dan_A           85 KVEKKDLFTGTYM-PSTKLTGGYRVLSYLDPSEPRHAQLKNL-LFFMLKNS-SNRVIPQFETTYTELFEGLEAELAKNGK  161 (473)
T ss_dssp             TEECSSCTTSSSC-CCGGGGTTSCCGGGCCTTSHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             ceecccccccccc-CCccccCCCcceeeeCCCcHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence               1111111111 1111121111234456789999999999 57888884 8999999999999999999765444578


Q ss_pred             eeHHHHHHHHHHHhhhhhhccccccch---hhHHHHHHHHHHhccccccccccccchhhhhc-cCch----HHHHHHHHH
Q 047291          183 VNLSEMLLTVTNDTVGRCVFGKKANEE---SKFGTISRRLTTQLQAFSFGDVFPALGWMDHL-TGLI----PCVKATFRS  254 (511)
Q Consensus       183 vdl~~~~~~~~~~~~~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~-~~~~----~~~~~~~~~  254 (511)
                      +|+.++++.+++++++.++||.++...   +.+......+........+...+|.  ++..+ ....    ....+..+.
T Consensus       162 vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~--~~~~~~~~~~~~~~~~~~~~~~~  239 (473)
T 3dan_A          162 AAFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWVLFNLAPTLDLGLPW--FLQEPLLHTFRLPAFLIKSTYNK  239 (473)
T ss_dssp             EECHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSCCH--HHHHHHHSSSCCCGGGTHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCCCchhhhhhHHHHHHHHHHHhccchhhhcchH--HHHHHHhhhccchHhhhhhchhh
Confidence            999999999999999999999988652   1222222222111000000001110  00000 0000    000111111


Q ss_pred             HHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHH-hhchhhHHHHHHHHHHHHhc-C
Q 047291          255 LDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMF-VGGTDSTSTTMEWAMAELVK-H  332 (511)
Q Consensus       255 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~  332 (511)
                      +.+++                   .++++.+++...+    .++++++++.+++.++ ++|++||+++++|++++|++ |
T Consensus       240 ~~~~~-------------------~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~  296 (473)
T 3dan_A          240 LYDYF-------------------QSVATPVMEQAEK----LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAG  296 (473)
T ss_dssp             HHHHH-------------------HHHCHHHHHHHHH----HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hHHHH-------------------HHHHHHHHHhHhh----cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcC
Confidence            11111                   2334445553322    3699999998887666 88899999999999999999 7


Q ss_pred             chHHHHHHHHHHHHhcC-C-CcCCcccccCchhHHHHHhhhcCCCCCCccccccccCCccee----cCeeeCCCcEEEee
Q 047291          333 PSTMKKAQEEVRRVVGK-K-LKVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKM----GGYEIPAKTRVFAN  406 (511)
Q Consensus       333 p~~~~~lr~Ei~~~~~~-~-~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~  406 (511)
                      |++|++||+|+++++++ + +.++.+++++||||+|||+|+||++|+++... |.+.+|+++    +||.||||+.|+++
T Consensus       297 P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~~~~~g~~Ip~G~~v~~~  375 (473)
T 3dan_A          297 ENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKKGEMLFGY  375 (473)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCccccc-ccccCCcEeecCCCceEeCCCCEEEec
Confidence            99999999999999765 3 57899999999999999999999999999987 668999999    99999999999999


Q ss_pred             hHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecC---------CCCCCCCCchHHHHHHHHHHHHhHhhccccc
Q 047291          407 AWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFG---------AGRRGCPGTLFGVTSAEGVVANLLYWFDWKL  477 (511)
Q Consensus       407 ~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg---------~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~  477 (511)
                      .+.+|+||++|+||++|||+||++.+.    ....+++||         +|+|.|+|++||.+|++++++.|+++|++..
T Consensus       376 ~~~~~~dp~~~~dp~~F~p~R~~~~~~----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~  451 (473)
T 3dan_A          376 QPFATKDPKVFDRPEEYVPDRFVGDGE----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFE  451 (473)
T ss_dssp             HHHHTTCTTTSSSTTSCCTTTTSGGGG----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred             hHHhhCCchhcCCcccCCccccCCCcc----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEE
Confidence            999999999999999999999997621    223444555         4559999999999999999999999999765


Q ss_pred             CC
Q 047291          478 PG  479 (511)
Q Consensus       478 ~~  479 (511)
                      .+
T Consensus       452 ~~  453 (473)
T 3dan_A          452 IE  453 (473)
T ss_dssp             EE
T ss_pred             cc
Confidence            43


No 65 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=3e-58  Score=445.07  Aligned_cols=384  Identities=19%  Similarity=0.265  Sum_probs=302.2

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhcc-------CCceeEecC
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLY-------GCIDIAFSP  133 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  133 (511)
                      .+..+++.++.++ ++||||+++.+|   .++|++|+++++|++++ ..++.++..........       .....++..
T Consensus        26 ~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  100 (418)
T 3r9b_A           26 ATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFL  100 (418)
T ss_dssp             GGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGC
T ss_pred             hhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhc
Confidence            3468899999988 588999998765   89999999999999764 33344432221111110       112345667


Q ss_pred             CchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhH
Q 047291          134 YGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKF  212 (511)
Q Consensus       134 ~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~  212 (511)
                      +|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++ +.+    ++++|+...+ ..+++++++. +||.+..+.+.+
T Consensus       101 dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~-l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~  173 (418)
T 3r9b_A          101 DPPDHTRLRGL-VSKAFAPRVIKRLEPEITALVDQLLD-AVD----GPEFNLIDNLAYPLPVAVICR-LLGVPIEDEPKF  173 (418)
T ss_dssp             CTTHHHHHHHH-HHGGGSHHHHGGGHHHHHHHHHHHHH-TCC----SSEEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHH
T ss_pred             CCchHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHh-hhc----cCCeehHHHHhCcCCHHHHHH-HcCCCHHHHHHH
Confidence            89999999999 57999999999999999999999998 642    4589987655 6899999999 899988766556


Q ss_pred             HHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccc
Q 047291          213 GTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDA  292 (511)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~  292 (511)
                      ......+......      .+.+.++  .....+...++.+.+.+++.+.++++++.       ..+|+++.|+++..++
T Consensus       174 ~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~~  238 (418)
T 3r9b_A          174 SRASALLAAALDP------FLALTGE--TSDLFDEQMKAGMWLRDYLRALIDERRRT-------PGEDLMSGLVAVEESG  238 (418)
T ss_dssp             HHHHHHHHHTTSC------HHHHHSS--CCTTHHHHHHHHHHHHHHHHHHHHHTTTS-------CCSSHHHHHHHHHHHS
T ss_pred             HHHHHHHHhhcCc------ccccccc--CHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCccHHHHHHHhhhcc
Confidence            5555544332211      1111111  01334567788888999999999887643       3568999999874332


Q ss_pred             ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhc
Q 047291          293 TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESL  372 (511)
Q Consensus       293 ~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  372 (511)
                         .+++++++++++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|+|
T Consensus       239 ---~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~l  297 (418)
T 3r9b_A          239 ---DQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------------------RASAVIEETM  297 (418)
T ss_dssp             ---SSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG------------------GHHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------hHHHHHHHHH
Confidence               3699999999999999999999999999999999999999999999843                  7999999999


Q ss_pred             CCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCC
Q 047291          373 RLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGC  452 (511)
Q Consensus       373 Rl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C  452 (511)
                      |++|+++... |.+.+|++++||.||||+.|+++.+++|+||++|+||++|||+|+          +..++|||+|+|.|
T Consensus       298 Rl~p~~~~~~-R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~----------~~~~~~FG~G~r~C  366 (418)
T 3r9b_A          298 RYDPPVQLVS-RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA----------QIRHLGFGKGAHFC  366 (418)
T ss_dssp             HHSCSBCCEE-EEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGCC
T ss_pred             HhCCccccce-eEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC----------CCCCcCCCCcCccC
Confidence            9999999865 999999999999999999999999999999999999999999991          23579999999999


Q ss_pred             CCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          453 PGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       453 ~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      +|++||.+|++++++.|+++| +++++++     ..+  ..+.+.+....+.|++++|.
T Consensus       367 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-----~~~--~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          367 LGAPLARLEATVALPALAARFPEARLSGE-----PEY--KRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCTTCEECSC-----CEE--CSCSSBCCEEECEEEC----
T ss_pred             ccHHHHHHHHHHHHHHHHHhCccceeCCC-----Ccc--ccCCcccCcceeEEEecCCC
Confidence            999999999999999999999 7998754     112  23445677888888888874


No 66 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=7.7e-58  Score=437.14  Aligned_cols=348  Identities=16%  Similarity=0.182  Sum_probs=292.3

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEeecC----cCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCch
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHWGQ----TPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGE  136 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~~~----~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (511)
                      .+..+++.++.++ ++||||+++++++    .++++|+||+++++|++ +...|++++......... .+.+.+++.+|+
T Consensus         9 ~~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~   85 (384)
T 3oo3_A            9 RLRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADRA-LLPGILQAYDPP   85 (384)
T ss_dssp             EETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-----C-CCTTCGGGCCTT
T ss_pred             ccccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCcccccccccc-ccccccccCCCh
Confidence            3467899999999 5999999999876    89999999999999995 445677665543222111 123456677899


Q ss_pred             hHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhccccccchhhHHHHH
Q 047291          137 YWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGKKANEESKFGTIS  216 (511)
Q Consensus       137 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~  216 (511)
                      .|+++|+. +.+.|+++.++.+.+.+.+.++++++.+.+   +++++|+.+++...+.+.+...+||.+.++.+.+....
T Consensus        86 ~~~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~  161 (384)
T 3oo3_A           86 DHTRLRRT-VAPAYSARRMERLRPRIEEIVEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQAELSRMI  161 (384)
T ss_dssp             HHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHH
T ss_pred             hHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            99999999 588999999999999999999999999976   46789999999998888888889999877665665555


Q ss_pred             HHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccccccc
Q 047291          217 RRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKH  296 (511)
Q Consensus       217 ~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~  296 (511)
                      ..+..                    ....+...++.+.+.+++.+.++++++.       ..+|+++.+++..  +   .
T Consensus       162 ~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~d~l~~ll~~~--~---~  209 (384)
T 3oo3_A          162 RESRE--------------------SRLPRQRTLSGLGIVNYTKRLTSGKRRD-------PGDGMIGVIVREH--G---A  209 (384)
T ss_dssp             HHHHH--------------------CSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHH--G---G
T ss_pred             HHHhc--------------------cCChHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhc--C---C
Confidence            54432                    0123446677888899999999887642       3468999999861  1   3


Q ss_pred             CCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCC
Q 047291          297 ELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHA  376 (511)
Q Consensus       297 ~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~  376 (511)
                      +++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++.                  ++|||+|+||++|
T Consensus       210 ~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------l~a~i~E~lRl~p  271 (384)
T 3oo3_A          210 EISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------IDSATEEVLRHAS  271 (384)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------HHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------HHHHHHHHHHhCC
Confidence            6999999999999999999999999999999999999999999999753                  8999999999999


Q ss_pred             CCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCch
Q 047291          377 PAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTL  456 (511)
Q Consensus       377 ~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  456 (511)
                      +++...+|.+.+|++++||.||||+.|+++.+++|+     +||++|+|+||          +..++|||+|+|.|+|++
T Consensus       272 ~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~----------~~~~~~FG~G~r~C~G~~  336 (384)
T 3oo3_A          272 IVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITRE----------KATHMAFGHGIHHCIGAP  336 (384)
T ss_dssp             SCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCS----------CCCCCTTCCSTTSCTTHH
T ss_pred             cccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCC----------CCCcCCCCCCCcCCCCHH
Confidence            999777799999999999999999999999999999     89999999995          346899999999999999


Q ss_pred             HHHHHHHHHHHHhHhhc-ccccCCC
Q 047291          457 FGVTSAEGVVANLLYWF-DWKLPGD  480 (511)
Q Consensus       457 ~A~~e~~~~la~ll~~f-~~~~~~~  480 (511)
                      ||.+|++++++.|+++| |+++.++
T Consensus       337 lA~~e~~~~l~~ll~~f~~~~l~~~  361 (384)
T 3oo3_A          337 LARLQLRVALPAVVGRFPSLRLAVP  361 (384)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             HHHHHHHHHHHHHHHhCCCCeeCCC
Confidence            99999999999999999 9998765


No 67 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=2.2e-58  Score=442.30  Aligned_cols=346  Identities=16%  Similarity=0.228  Sum_probs=278.4

Q ss_pred             cHHHHHHHHhhCCcEEEeec-Cc---CEEEecCHHHHHHHHHhcCcccccCCCc------cchhhh--ccCCceeEecCC
Q 047291           67 HRSLRALSKKYGPLMLIHWG-QT---PTVIVSSADMAKEMMKTHDIIFSNRPKT------TAADIF--LYGCIDIAFSPY  134 (511)
Q Consensus        67 ~~~~~~~~~kyG~v~~~~~~-~~---~~vvv~~p~~i~~i~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~  134 (511)
                      +..+.+++++ |||+++.++ |.   ++++|+||+++++|+.++. .|+.++..      ......  ...+ ..+++.+
T Consensus        16 ~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~   92 (398)
T 1lfk_A           16 LDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELV-GNLMDYD   92 (398)
T ss_dssp             TEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCT-TCGGGCC
T ss_pred             CChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccc-cCccccC
Confidence            3344557766 999999875 55   8999999999999993232 35554431      101100  1112 2345567


Q ss_pred             chhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHH-HHHHhhhhhhccccccchhhHH
Q 047291          135 GEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLT-VTNDTVGRCVFGKKANEESKFG  213 (511)
Q Consensus       135 ~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~-~~~~~~~~~~fG~~~~~~~~~~  213 (511)
                      |+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+.+   +++++|+.+++.. ++.++++. +||.+.++.+.+.
T Consensus        93 g~~~~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~  167 (398)
T 1lfk_A           93 PPEHTRLRRK-LTPGFTLRKMQRMAPYIEQIVNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRDDRDMFM  167 (398)
T ss_dssp             TTHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHH
T ss_pred             CHHHHHHHHH-HHhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHH
Confidence            9999999999 578899999999999999999999999975   3568999999987 88999987 5899876544444


Q ss_pred             HHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccc
Q 047291          214 TISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDAT  293 (511)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~  293 (511)
                      .....+.    .     .          .+..++..++.+.+.+++.+.|+++++.       ..+|+++.|+++. +  
T Consensus       168 ~~~~~~~----~-----~----------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~-~--  218 (398)
T 1lfk_A          168 KLCHGHL----D-----A----------SLSQKRRAALGDKFSRYLLAMIARERKE-------PGEGMIGAVVAEY-G--  218 (398)
T ss_dssp             HHHHHTT----C-----T----------TSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHH-G--
T ss_pred             HHHHHHH----h-----c----------ccchHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhc-C--
Confidence            3332211    0     0          0122446677888899999999988753       2468999999765 1  


Q ss_pred             cccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcC
Q 047291          294 TKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLR  373 (511)
Q Consensus       294 ~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  373 (511)
                        ..++++++.+++..+++||+|||+++++|++++|++||++|+||++|++                  |++|||+|+||
T Consensus       219 --~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR  278 (398)
T 1lfk_A          219 --DDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ------------------SAQRAVDELIR  278 (398)
T ss_dssp             --GGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH------------------HHHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHH
Confidence              3699999999999999999999999999999999999999999999864                  79999999999


Q ss_pred             CCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCC
Q 047291          374 LHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCP  453 (511)
Q Consensus       374 l~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~  453 (511)
                      ++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.          ..++|||+|+|.|+
T Consensus       279 l~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~  348 (398)
T 1lfk_A          279 YLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP----------IPHVAFGHGVHHCL  348 (398)
T ss_dssp             HHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC----------CCCCTTCCSTTSCT
T ss_pred             hCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC----------CCCCCCCCCCCcCC
Confidence            99999966679999999999999999999999999999999999999999999983          24799999999999


Q ss_pred             CchHHHHHHHHHHHHhHhhc-ccccCC
Q 047291          454 GTLFGVTSAEGVVANLLYWF-DWKLPG  479 (511)
Q Consensus       454 G~~~A~~e~~~~la~ll~~f-~~~~~~  479 (511)
                      |++||++|++++++.|+++| ++++.+
T Consensus       349 G~~lA~~e~~~~l~~ll~~f~~~~l~~  375 (398)
T 1lfk_A          349 GAALARLELRTVFTELWRRFPALRLAD  375 (398)
T ss_dssp             THHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCEeCC
Confidence            99999999999999999999 899864


No 68 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=1.4e-57  Score=436.10  Aligned_cols=373  Identities=16%  Similarity=0.185  Sum_probs=289.1

Q ss_pred             cCCCCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccc-c-CCCc--cchh--hh-ccCCceeEec
Q 047291           61 QLGNLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFS-N-RPKT--TAAD--IF-LYGCIDIAFS  132 (511)
Q Consensus        61 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~-~-~~~~--~~~~--~~-~~~~~~~~~~  132 (511)
                      .+..+++..+.++ ++||||+++++ ++.+.++|+||+++++++.++.  |. + ++..  ....  .. ...+.+.+++
T Consensus        13 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   89 (396)
T 1n40_A           13 ARGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVVNNMGNI   89 (396)
T ss_dssp             CCSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGGGHHHHH
T ss_pred             ccccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhhhhhhhH
Confidence            3567899999999 99999999997 7889999999999999998642  44 3 3221  1110  00 0012222222


Q ss_pred             CCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhh
Q 047291          133 PYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESK  211 (511)
Q Consensus       133 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~  211 (511)
                          .|+++|+. +.+.|++. ++.+.+.+.+.++++++.+.+.   ++++|+.+++ ..+++++++. +||.+.++.+.
T Consensus        90 ----~h~~~R~~-~~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~---~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~  159 (396)
T 1n40_A           90 ----ADAGLRKA-VMKAITPK-APGLEQFLRDTANSLLDNLITE---GAPADLRNDFADPLATALHCK-VLGIPQEDGPK  159 (396)
T ss_dssp             ----HHTTCHHH-HHHHTSSC-STTHHHHHHHHHHHHHHHHHHH---CSCEETTTTTHHHHHHHHHHH-HHTCCGGGHHH
T ss_pred             ----HHHHHHHH-HHHhhChH-HHHhHHHHHHHHHHHHHHHHhc---CCCccHHHHHHHHhHHHHHHH-HhCCChhhHHH
Confidence                89999999 57789999 9999999999999999999762   5689998665 4799999998 89998765444


Q ss_pred             HHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccc
Q 047291          212 FGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKD  291 (511)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~  291 (511)
                      +......+....   .   ..|           .++..++.+.+ +++.+.++    +     ....+|+++.|+++..+
T Consensus       160 ~~~~~~~~~~~~---~---~~p-----------~~~~~~~~~~~-~~~~~~i~----~-----~~~~~dll~~ll~~~~~  212 (396)
T 1n40_A          160 LFRSLSIAFMSS---A---DPI-----------PAAKINWDRDI-EYMAGILE----N-----PNITTGLMGELSRLRKD  212 (396)
T ss_dssp             HHHTHHHHTBCC---S---SCC-----------HHHHHHHHHHH-HHHHHHHH----C-----TTCCSHHHHHHHHHHTS
T ss_pred             HHHHHHHHhccc---c---CCC-----------HHHHHHHHHHH-HHHHHHHh----C-----CCCCCCHHHHHHHhhcc
Confidence            444433321110   0   011           12345556666 77777766    1     12346899999986411


Q ss_pred             cccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhh
Q 047291          292 ATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKES  371 (511)
Q Consensus       292 ~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~  371 (511)
                      . ....++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|+                  .|++|||+|+
T Consensus       213 ~-~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~  273 (396)
T 1n40_A          213 P-AYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP------------------ELIPAGVEEL  273 (396)
T ss_dssp             G-GGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHH
T ss_pred             c-ccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH------------------HHHHHHHHHH
Confidence            0 12369999999999999999999999999999999999999999999984                  3799999999


Q ss_pred             cCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCC
Q 047291          372 LRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRG  451 (511)
Q Consensus       372 lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~  451 (511)
                      ||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.+         ..++|||+|+|.
T Consensus       274 lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---------~~~~~FG~G~r~  344 (396)
T 1n40_A          274 LRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP---------TSHLAFGRGQHF  344 (396)
T ss_dssp             HHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST---------TCSSTTCCGGGC
T ss_pred             HhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC---------CCCCCCCCCCcC
Confidence            99999999666799999999999999999999999999999999999999999999973         257999999999


Q ss_pred             CCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEE
Q 047291          452 CPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLV  505 (511)
Q Consensus       452 C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (511)
                      |+|++||++|++++++.|+++| ++++.++.  .++.+..  +.+.+....+.|+
T Consensus       345 C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~~--~~~~~~~~~lpv~  395 (396)
T 1n40_A          345 CPGSALGRRHAQIGIEALLKKMPGVDLAVPI--DQLVWRT--RFQRRIPERLPVL  395 (396)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCBCC--SBSBCCBSCCEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCccccccCCc--ccccccc--ccccCCcceeeee
Confidence            9999999999999999999999 59987542  1223332  3334555555554


No 69 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=1.2e-56  Score=432.79  Aligned_cols=358  Identities=19%  Similarity=0.240  Sum_probs=287.2

Q ss_pred             CCCCcHHHHHHHHhhCCcEEEee-cCcCEEEecCHHHHHHHHHhcCcccccCCC---ccchh-----hhccCCceeEecC
Q 047291           63 GNLPHRSLRALSKKYGPLMLIHW-GQTPTVIVSSADMAKEMMKTHDIIFSNRPK---TTAAD-----IFLYGCIDIAFSP  133 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~  133 (511)
                      ..+|+.++.+++++ |||+++.. ++.++++|++++++++|+++.. .|+..+.   .....     .......+.+++.
T Consensus        37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  114 (426)
T 3rwl_A           37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM  114 (426)
T ss_dssp             TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred             cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCcccccccccccccccCccccc
Confidence            35688999999876 99999986 5677999999999999998653 3444321   11100     0000122345677


Q ss_pred             CchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhH
Q 047291          134 YGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKF  212 (511)
Q Consensus       134 ~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~  212 (511)
                      +|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+.    +++++|+..++ ..++.++++. +||.+..+.+.+
T Consensus       115 dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~  188 (426)
T 3rwl_A          115 DRPRHDEQRKA-VSPIVAPANLAALEGTIRERVSKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFDFPFEERRKL  188 (426)
T ss_dssp             CTTHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGGTHHH
T ss_pred             CchHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcCCCHHHHHHH
Confidence            89999999999 68999999999999999999999998873    35789988777 5778887776 899876555444


Q ss_pred             HHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhcccc
Q 047291          213 GTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDA  292 (511)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~  292 (511)
                      ........    ....    +.  .    ........++.+.+.+++.+++++++.      ....+|+++.|+++..++
T Consensus       189 ~~~~~~~~----~~~~----~~--~----~~~~~~~~~~~~~~~~~~~~~i~~r~~------~~~~~dll~~ll~~~~~~  248 (426)
T 3rwl_A          189 TRWSDVTT----AAPG----GG--V----VESWDQRKTELLECAAYFQVLWNERVN------KDPGNDLISMLAHSPATR  248 (426)
T ss_dssp             HHHHHHHT----CCTT----SS--S----CSSHHHHHHHHHHHHHHHHHHHHHHHT------SCCCSSHHHHHHHCGGGG
T ss_pred             HHHHHHHH----hccC----cc--c----cccHHHHHHHHHHHHHHHHHHHHHHhh------cCCCCCHHHHHHhcccCC
Confidence            44322211    1000    00  0    122334566778889999999988742      234579999999875432


Q ss_pred             ccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhc
Q 047291          293 TTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESL  372 (511)
Q Consensus       293 ~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  372 (511)
                          ++++++++++++.+++||+|||+++++|++++|++||++|++|++|                  ++|+++||+|+|
T Consensus       249 ----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E------------------~~~l~a~i~E~L  306 (426)
T 3rwl_A          249 ----NMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN------------------PALVETMVPEII  306 (426)
T ss_dssp             ----GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGGHHHHHHHHH
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhC------------------hHhHHHHHHHHH
Confidence                4899999999999999999999999999999999999999999998                  358999999999


Q ss_pred             CCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCC
Q 047291          373 RLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGC  452 (511)
Q Consensus       373 Rl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C  452 (511)
                      |++|+++. .+|.+++|++++||.||||+.|+++.+++|+||++|+||++|||+||..         ..++|||+|+|.|
T Consensus       307 Rl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~---------~~~l~FG~G~r~C  376 (426)
T 3rwl_A          307 RWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP---------RQHLSFGFGIHRC  376 (426)
T ss_dssp             HHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT---------TCCSTTCCSTTSC
T ss_pred             HhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC---------CCccCCCCCCcCC
Confidence            99999998 4699999999999999999999999999999999999999999999943         3689999999999


Q ss_pred             CCchHHHHHHHHHHHHhHhhc-ccccCCC
Q 047291          453 PGTLFGVTSAEGVVANLLYWF-DWKLPGD  480 (511)
Q Consensus       453 ~G~~~A~~e~~~~la~ll~~f-~~~~~~~  480 (511)
                      +|++||.+|++++++.|+++| ++++.++
T Consensus       377 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  405 (426)
T 3rwl_A          377 VGNRLAEMQLRILWEEILTRFSRIEVMAE  405 (426)
T ss_dssp             SSHHHHHHHHHHHHHHHHTTCSEEEECSC
T ss_pred             ccHHHHHHHHHHHHHHHHHhCccCeeCCC
Confidence            999999999999999999999 9998754


No 70 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=3.4e-56  Score=429.02  Aligned_cols=365  Identities=18%  Similarity=0.253  Sum_probs=285.9

Q ss_pred             CCcccccccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchh----hhccCCce
Q 047291           53 LPIIGNLHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAAD----IFLYGCID  128 (511)
Q Consensus        53 ~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~  128 (511)
                      +|.+++.  ...+|+.+  ++.++||+++++.++... ++|++++++++|++++...+..+.......    .......+
T Consensus        24 lp~~~~~--~~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (416)
T 3p3o_A           24 LPFLDFT--DPNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMVD   98 (416)
T ss_dssp             CCBCCTT--STTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHHHH
T ss_pred             CCCCCcc--cccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhhcC
Confidence            4554432  35678887  555689999999886556 999999999999987542211110000000    00000124


Q ss_pred             eEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhcccccc
Q 047291          129 IAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKAN  207 (511)
Q Consensus       129 ~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~  207 (511)
                      .+++.+|+.|+++|+. +.+.|++..++.+.+.+.+.++++++.+ .    ++.+|+...+ ..++.++++. +||.+..
T Consensus        99 ~l~~~dg~~h~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l-~----~g~~d~~~~~~~~~~~~vi~~-l~G~~~~  171 (416)
T 3p3o_A           99 FLQSLDGADHRRLRGL-ATHPFTPRRITAVQPFVRSTVEQLIDKL-P----QGDFDFVQHFPHPLPALVMCQ-LLGFPLE  171 (416)
T ss_dssp             SGGGCCHHHHHHHHHT-TCGGGSHHHHHHHHHHHHHHHHHHHHTC-C----SSSEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred             ccccCCchHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHhh-c----cCCccHHHHHHHHHHHHHHHH-HhCCCHH
Confidence            5667789999999999 5799999999999999999999999988 3    2459976555 5699999998 5898765


Q ss_pred             chhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHH
Q 047291          208 EESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQ  287 (511)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~  287 (511)
                      +.+.+......+...         +....    .....+...++.+.+.+++.+.++++++.       ..+|+++.|++
T Consensus       172 ~~~~~~~~~~~~~~~---------~~~~~----~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~ll~  231 (416)
T 3p3o_A          172 DYDTVGRLSIETNLG---------LALSN----DQDILVKVEQGLGRMFDYLVAAIEKRKVE-------PGDDLTSDIVR  231 (416)
T ss_dssp             GHHHHHHHHHTTCGG---------GTTCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHhh---------ccccc----chhhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCccHHHHHHH
Confidence            544443332221111         00000    01223456778888999999999988753       35689999998


Q ss_pred             hccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHH
Q 047291          288 VQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCV  367 (511)
Q Consensus       288 ~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~  367 (511)
                      +..++    +++++++.+++..+++||+|||+++++|++++|++||++|++|++|++                  |+++|
T Consensus       232 ~~~~~----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~  289 (416)
T 3p3o_A          232 AFHDG----VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LAPQA  289 (416)
T ss_dssp             HHHTT----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHH
T ss_pred             hhccC----CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHH
Confidence            75432    699999999999999999999999999999999999999999999852                  79999


Q ss_pred             HhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCC
Q 047291          368 IKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGA  447 (511)
Q Consensus       368 i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~  447 (511)
                      |+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+||.+         ..++|||+
T Consensus       290 i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~---------~~~l~FG~  360 (416)
T 3p3o_A          290 VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE---------APSIAFGG  360 (416)
T ss_dssp             HHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS---------SCCCTTCC
T ss_pred             HHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC---------CCeecCCC
Confidence            999999999997777899999999999999999999999999999999999999999999742         35899999


Q ss_pred             CCCCCCCchHHHHHHHHHHHHhHhhcc-cccCCC
Q 047291          448 GRRGCPGTLFGVTSAEGVVANLLYWFD-WKLPGD  480 (511)
Q Consensus       448 G~r~C~G~~~A~~e~~~~la~ll~~f~-~~~~~~  480 (511)
                      |+|.|+|++||.+|++++++.|+++|+ +++.++
T Consensus       361 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  394 (416)
T 3p3o_A          361 GPHFCLGTALARLELTEAVAALATRLDPPQIAGE  394 (416)
T ss_dssp             STTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSC
T ss_pred             CCccCcCHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence            999999999999999999999999995 888643


No 71 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=1.1e-55  Score=418.87  Aligned_cols=357  Identities=17%  Similarity=0.230  Sum_probs=278.1

Q ss_pred             CcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCC-----ccch--hh--hccCCceeEecCCch
Q 047291           66 PHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPK-----TTAA--DI--FLYGCIDIAFSPYGE  136 (511)
Q Consensus        66 ~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~-----~~~~--~~--~~~~~~~~~~~~~~~  136 (511)
                      |+..+.++ ++||||+++   | +.+++++|+++++|+.++ ..|++++.     ....  ..  ........++..+|+
T Consensus         1 p~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~   74 (368)
T 1io7_A            1 MYDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPP   74 (368)
T ss_dssp             CHHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTT
T ss_pred             CCHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCCh
Confidence            45667777 599999987   3 589999999999999864 45666653     1100  01  110011345566899


Q ss_pred             hHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhHHHH
Q 047291          137 YWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKFGTI  215 (511)
Q Consensus       137 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~  215 (511)
                      .|+++|+. +.+.|+++.++.+.+.+.+.++++++.+ +   + +++|+.+++ +.+++++++.+ ||.+.++.+.+...
T Consensus        75 ~h~~~R~~-~~~~f~~~~~~~~~~~i~~~~~~l~~~l-~---~-g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~  147 (368)
T 1io7_A           75 LHDELRSM-SADIFSPQKLQTLETFIRETTRSLLDSI-D---P-REDDIVKKLAVPLPIIVISKI-LGLPIEDKEKFKEW  147 (368)
T ss_dssp             HHHHHHGG-GTTTTCHHHHHHHHHHHHHHHHHHHHTC-C---T-TSEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHH
T ss_pred             HHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHHHHHh-h---c-CCccHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHH
Confidence            99999999 6789999999999999999999999988 4   2 379999876 78999999999 99987654333222


Q ss_pred             HHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccc
Q 047291          216 SRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTK  295 (511)
Q Consensus       216 ~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~  295 (511)
                      .    ...... ..  .|.         ..++..++.+.+.+++.+.+            ...+|+++.|+++       
T Consensus       148 ~----~~~~~~-~~--~p~---------~~~~~~~~~~~~~~~~~~~i------------~~~~d~l~~ll~~-------  192 (368)
T 1io7_A          148 S----DLVAFR-LG--KPG---------EIFELGKKYLELIGYVKDHL------------NSGTEVVSRVVNS-------  192 (368)
T ss_dssp             G----GGCTTS-CC--CTT---------CHHHHHHHHHHHHHHHHHHT------------TSSCHHHHHHHTS-------
T ss_pred             H----HHHHhc-cC--ChH---------HHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHhc-------
Confidence            1    111110 00  121         11334556666677666665            1235899999864       


Q ss_pred             cCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCC
Q 047291          296 HELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLH  375 (511)
Q Consensus       296 ~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~  375 (511)
                       .++++++.+++..+++||+|||+++++|++++|++|| +|+|+++| +                  |++|||+|+||++
T Consensus       193 -~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~------------------~l~a~i~E~lRl~  251 (368)
T 1io7_A          193 -NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N------------------LYLKAIEEALRYS  251 (368)
T ss_dssp             -SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T------------------CHHHHHHHHHHHS
T ss_pred             -cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c------------------hHHHHHHHHHHhC
Confidence             4899999999999999999999999999999999999 99999998 2                  6899999999999


Q ss_pred             CCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCc
Q 047291          376 APAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGT  455 (511)
Q Consensus       376 ~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~  455 (511)
                      |+++ ..+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|||+          +..++|||+|+|.|+|+
T Consensus       252 p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~~~FG~G~r~C~G~  320 (368)
T 1io7_A          252 PPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN----------PNPHLSFGSGIHLCLGA  320 (368)
T ss_dssp             CSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC----------SCCCCTTCCGGGSCTTH
T ss_pred             cccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC----------CCCCcCCCCCccCCCCH
Confidence            9999 567999999999999999999999999999999999999999999993          12579999999999999


Q ss_pred             hHHHHHHHHHHHHhHhhcc-cccCCCCCCCCCCCccccCceecccCceeEEeeccC
Q 047291          456 LFGVTSAEGVVANLLYWFD-WKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVMYS  510 (511)
Q Consensus       456 ~~A~~e~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  510 (511)
                      +||.+|++++++.|+++|+ +++.+ .     .+..  +...+....+.|++++|.
T Consensus       321 ~lA~~e~~~~l~~ll~~f~~~~~~~-~-----~~~~--~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          321 PLARLEARIAIEEFSKRFRHIEILD-T-----EKVP--NEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEE-E-----EECC--CSSBCCEEEEEEEEEC--
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEecC-c-----eecc--CCcccCCceeEEEeccCC
Confidence            9999999999999999996 99864 1     1222  233456677888888874


No 72 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=1e-55  Score=418.33  Aligned_cols=355  Identities=14%  Similarity=0.185  Sum_probs=279.4

Q ss_pred             CcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCC-cc-ch-----hhhccCC--ceeEecCCch
Q 047291           66 PHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPK-TT-AA-----DIFLYGC--IDIAFSPYGE  136 (511)
Q Consensus        66 ~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~-~~-~~-----~~~~~~~--~~~~~~~~~~  136 (511)
                      |+..+.++ ++||||+++.  |  .++|++|+++++|+.++ ..|++++. .. ..     .....+.  ...++..+|+
T Consensus         1 p~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~   74 (367)
T 3b4x_A            1 MYDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPP   74 (367)
T ss_dssp             CHHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTT
T ss_pred             CCHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCch
Confidence            35567777 5899999997  3  79999999999999865 35665532 21 11     1011121  1334566899


Q ss_pred             hHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhHHHH
Q 047291          137 YWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKFGTI  215 (511)
Q Consensus       137 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~  215 (511)
                      .|+++|+. +.+.|+++.++.  +.+.+.++++++.+.     + ++|+.+++ ..+++++++. +||.+ ++.+.+...
T Consensus        75 ~h~~~R~~-~~~~fs~~~l~~--~~i~~~~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~~~~~~~~  143 (367)
T 3b4x_A           75 LHDELRNL-TADAFNPSNLPV--DFVREVTVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-PDVKKVKDW  143 (367)
T ss_dssp             HHHHHHHT-TGGGGSGGGSCH--HHHHHHHHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-CCHHHHHHH
T ss_pred             hHHHHHHH-HHHhcCHhhhcc--hHHHHHHHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-CcHHHHHHH
Confidence            99999999 678999999988  888899998888775     2 49999765 7999999999 79998 655555555


Q ss_pred             HHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccc
Q 047291          216 SRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTK  295 (511)
Q Consensus       216 ~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~  295 (511)
                      ...+.....      ..|..         .+.. ++.+.+.+++.+.++++++.       ..+|+++.|+++       
T Consensus       144 ~~~~~~~~~------~~p~~---------~~~~-~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~-------  193 (367)
T 3b4x_A          144 SDLVALRLG------RADEI---------FSIG-RKYLELISFSKKELDSRKGK-------EIVDLTGKIANS-------  193 (367)
T ss_dssp             HHHHHTTTT------STTGG---------GCCC-HHHHHHHHHHHHHHHHHTTT-------CCSSHHHHHHTS-------
T ss_pred             HHHHHhccC------CChhh---------HHHH-HHHHHHHHHHHHHHHHHhcC-------CCCCHHHHHHhc-------
Confidence            444332211      01211         1112 56677888889998887642       346899999865       


Q ss_pred             cCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCC
Q 047291          296 HELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLH  375 (511)
Q Consensus       296 ~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~  375 (511)
                       +++++++.+++..+++||+|||+++++|++++|++ |++|++|++|++                    +|||+|+||++
T Consensus       194 -~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~--------------------~a~i~E~lRl~  251 (367)
T 3b4x_A          194 -NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA--------------------LKAVEEALRFS  251 (367)
T ss_dssp             -SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS--------------------HHHHHHHHHHS
T ss_pred             -cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc--------------------hHHHHHHHHhc
Confidence             48999999999999999999999999999999999 999999999942                    89999999999


Q ss_pred             CCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCc
Q 047291          376 APAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGT  455 (511)
Q Consensus       376 ~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~  455 (511)
                      |+++ ..+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|||+||.          ..++|||+|+|.|+|+
T Consensus       252 p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~  320 (367)
T 3b4x_A          252 PPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP----------NPHLSFGSGIHLCLGA  320 (367)
T ss_dssp             CSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTSCTTH
T ss_pred             Cccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC----------CCCcCCCCCCccCccH
Confidence            9999 5679999999999999999999999999999999999999999999984          2579999999999999


Q ss_pred             hHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeec
Q 047291          456 LFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVM  508 (511)
Q Consensus       456 ~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (511)
                      +||++|++++++.|+++| ++++.++      .+..  +...+....+.|+.++
T Consensus       321 ~lA~~e~~~~l~~ll~~f~~~~l~~~------~~~~--~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          321 PLARLEARIALEEFAKKFRVKEIVKK------EKID--NEVLNGYRKLVVRVER  366 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHEEEEEEEEE------EECC--CSSBCSEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCceeCCc------cccc--cccccCcceEEEEecC
Confidence            999999999999999999 7998653      1322  2234555566666543


No 73 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=2.6e-55  Score=419.76  Aligned_cols=354  Identities=19%  Similarity=0.250  Sum_probs=282.7

Q ss_pred             CCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCchhHHHHH
Q 047291           63 GNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIR  142 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  142 (511)
                      ..+|+..+.++++ +|||+++..|   .++|+++++++++++++  .|+..+......... ...+.+++.+|+.|+++|
T Consensus        19 ~~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~-~~~~~l~~~dg~~h~~~R   91 (394)
T 2wiy_A           19 RNNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWA-VASDTALGSDPPHHTVLR   91 (394)
T ss_dssp             HHCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGG-GGGGSGGGCCTTHHHHHH
T ss_pred             ccCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccch-hcccccccCCchHHHHHH
Confidence            3478888988865 5899988643   68999999999999753  233221111011111 112345677899999999


Q ss_pred             HHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHHh
Q 047291          143 RIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGKKANEESKFGTISRRLTTQ  222 (511)
Q Consensus       143 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~  222 (511)
                      +. +.+.|+++.++.+.+.+.+.++++++.+.    +++++|+.+.+..++.++++..+||.+.++.+.+..........
T Consensus        92 ~~-~~~~fs~~~~~~~~~~i~~~~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~  166 (394)
T 2wiy_A           92 RQ-TNKWFTPKLVDGWVRTTRELVGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAMFEAMLM  166 (394)
T ss_dssp             HH-HHTTCSHHHHHHHTHHHHHHHHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHGG
T ss_pred             HH-HHhccCHHHHHHHHHHHHHHHHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHHh
Confidence            99 68999999999999999999999888764    35689999999999999999999999765544444333221110


Q ss_pred             ccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCChHH
Q 047291          223 LQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQEN  302 (511)
Q Consensus       223 ~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~  302 (511)
                            ....|..       .......++...+.+++.+.++++++.       +.+|+++.|+++..+    +.+++++
T Consensus       167 ------~~~~p~~-------~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~Ll~~~~~----~~ls~~e  222 (394)
T 2wiy_A          167 ------QSAEPAD-------GDVDRAAVAFGYLSARVAEMLEDKRVN-------PGDGLADSLLDAARA----GEITESE  222 (394)
T ss_dssp             ------GSSSCCT-------THHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHHHT----TSSCHHH
T ss_pred             ------ccCCccc-------hHHHHHHHHHHHHHHHHHHHHHHhhcC-------CCCcHHHHHHHhhhc----CCCCHHH
Confidence                  0111211       112334556677888889999888743       235899999976532    2599999


Q ss_pred             HHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCcccc
Q 047291          303 LKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLLV  382 (511)
Q Consensus       303 l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~  382 (511)
                      +.++++.+++||+|||+++++|++++|++||++|++|++|+                  +|+++||+|+||++|+++.. 
T Consensus       223 l~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~LRl~pp~~~~-  283 (394)
T 2wiy_A          223 AIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE------------------SARAAIINEMVRMDPPQLSF-  283 (394)
T ss_dssp             HHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCEE-
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHhhCCCccCe-
Confidence            99999999999999999999999999999999999999974                  57999999999999999864 


Q ss_pred             ccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHH
Q 047291          383 HRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSA  462 (511)
Q Consensus       383 ~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~  462 (511)
                      +|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||++.        ..++|||+|+|.|+|++||++|+
T Consensus       284 ~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~--------~~~l~FG~G~r~C~G~~lA~~e~  355 (394)
T 2wiy_A          284 LRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA--------SRNLSFGLGPHSCAGQIISRAEA  355 (394)
T ss_dssp             EEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG--------SCCSTTCCGGGSCTTHHHHHHHH
T ss_pred             eEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC--------CCccCCCCCCCcCCcHHHHHHHH
Confidence            5999999999999999999999999999999999999999999999842        25899999999999999999999


Q ss_pred             HHHHHHhHhhcc-cccCC
Q 047291          463 EGVVANLLYWFD-WKLPG  479 (511)
Q Consensus       463 ~~~la~ll~~f~-~~~~~  479 (511)
                      +++++.|+++|+ +++.+
T Consensus       356 ~~~l~~ll~~~~~~~l~~  373 (394)
T 2wiy_A          356 TTVFAVLAERYERIELAE  373 (394)
T ss_dssp             HHHHHHHHHHCSCEEESS
T ss_pred             HHHHHHHHHhCCCceECC
Confidence            999999999998 99875


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=2e-55  Score=412.98  Aligned_cols=320  Identities=16%  Similarity=0.217  Sum_probs=256.8

Q ss_pred             HhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCchhHHHHHHHhhhccCChhH
Q 047291           75 KKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQR  154 (511)
Q Consensus        75 ~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~  154 (511)
                      ++||||+++   |  .++|++|+++++|+.++ ..|++++.......   ++ ..++..+|+.|+++|+. +.+.|++..
T Consensus         2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~---~~-~~l~~~~g~~~~~~R~~-~~~~fs~~~   70 (343)
T 2rfb_A            2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA---GG-ISFITMDNPEHKEFRDI-SAPYFLPSK   70 (343)
T ss_dssp             -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------C-CGGGGCCHHHHHHHHHH-HHHHHSHHH
T ss_pred             CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc---cc-cccccCCchHHHHHHHH-hhhhcCHHH
Confidence            689999987   3  89999999999999865 35666542111111   22 33456689999999999 578999999


Q ss_pred             HhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HHHHHHhhhhhhccccccchhhHHHHHHHHHHhccccccccccc
Q 047291          155 VQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LTVTNDTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFP  233 (511)
Q Consensus       155 l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  233 (511)
                      ++.+.+.+.+.++++++.+.       ++|+.+++ ..+++++++.+ ||.+.++.+.+......+...        ..|
T Consensus        71 l~~~~~~i~~~~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~--------~~p  134 (343)
T 2rfb_A           71 INDYKDFIEETSNDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDSDMPLFKLWSDYIIGN--------KRD  134 (343)
T ss_dssp             HGGGHHHHHHHHHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHHTS--------CCS
T ss_pred             HHHHHHHHHHHHHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHHHHHHHHHHHHHHhhc--------cCc
Confidence            99999999999999988764       68998865 89999999998 999876555555544333221        012


Q ss_pred             cchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhh
Q 047291          234 ALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVG  313 (511)
Q Consensus       234 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~a  313 (511)
                      .+.       ..++. ++.+.+.+++.+.+              .+| ++.|+++..+   ...++++++.+++..+++|
T Consensus       135 ~~~-------~~~~~-~~~~~~~~~~~~~i--------------~~d-l~~ll~~~~~---~~~l~~~ei~~~~~~~~~A  188 (343)
T 2rfb_A          135 ENF-------NYVNN-RMVSRLLEIFKSDS--------------HGI-INVLAGSSLK---NRKLTMDEKIKYIMLLIIG  188 (343)
T ss_dssp             SHH-------HHHHH-HHHHHHHHHHHSCC--------------SSH-HHHHHTCBCS---SSBCCHHHHHHHHHHHHHH
T ss_pred             chh-------hHHHH-HHHHHHHHHHHHHH--------------hcc-HHHHHhhhcC---CCCCCHHHHHHHHHHHHHH
Confidence            210       01122 34444444444332              246 8888876432   2369999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCC-ccccccccCCccee
Q 047291          314 GTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPA-PLLVHRETSSSVKM  392 (511)
Q Consensus       314 g~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~-~~~~~R~~~~d~~i  392 (511)
                      |+|||+++++|++++|++||++|+|+++|+                     +|||+|+||++|++ + ..+|.+.+|+++
T Consensus       189 G~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p~~~~-~~~R~~~~d~~~  246 (343)
T 2rfb_A          189 GNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYSPIQF-LPHRFAAEDSYI  246 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSCSBCC-BCCCEESSCEEE
T ss_pred             hhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCccccc-ccceEECCCeEE
Confidence            999999999999999999999999999984                     89999999999999 8 567999999999


Q ss_pred             cCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhh
Q 047291          393 GGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYW  472 (511)
Q Consensus       393 ~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~  472 (511)
                      +||.||||+.|+++.+++|+||++|+||++|+||||           ..++|||+|+|.|+|++||++|++++++.|+++
T Consensus       247 ~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~  315 (343)
T 2rfb_A          247 NNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-----------EMHLAFGIGIHMCLGAPLARLEASIALNDILNH  315 (343)
T ss_dssp             TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-----------CCCccCCCCCccCCChHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999994           257999999999999999999999999999999


Q ss_pred             cc-cccCCC
Q 047291          473 FD-WKLPGD  480 (511)
Q Consensus       473 f~-~~~~~~  480 (511)
                      |+ +++.++
T Consensus       316 f~~~~~~~~  324 (343)
T 2rfb_A          316 FKRIKIDYK  324 (343)
T ss_dssp             CSCCCBCTT
T ss_pred             CCCceeCCC
Confidence            96 998763


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=2.5e-53  Score=407.89  Aligned_cols=386  Identities=16%  Similarity=0.194  Sum_probs=279.6

Q ss_pred             CCCCcccc---cccCCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccc---hhhhcc
Q 047291           51 PKLPIIGN---LHQLGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTA---ADIFLY  124 (511)
Q Consensus        51 ~~~p~iG~---~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~---~~~~~~  124 (511)
                      .++|.+|-   ..++..||+.++.+++ ++|||+++  .+...++|++++++++|+++.. .|+.......   ......
T Consensus        18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR-~~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~   93 (412)
T 4dnj_A           18 AGVPHLGIDPFALDYFADPYPEQETLR-EAGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKPW   93 (412)
T ss_dssp             TTSCEECCCTTSHHHHHSCHHHHHHHH-HHCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCCS
T ss_pred             CCCCccCCCCCCHHHHhCcHHHHHHHH-hcCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCccccccccccccc
Confidence            45777762   2234568999998886 57999866  4567899999999999997543 3433221111   111111


Q ss_pred             CCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHH-HHHHHHHHHhhhhhhcc
Q 047291          125 GCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLS-EMLLTVTNDTVGRCVFG  203 (511)
Q Consensus       125 ~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG  203 (511)
                      ...+.+++.+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++++..   .++++|+. ++...+..++++.++ |
T Consensus        94 ~~~~~~~~~Dg~~H~r~R~~-~~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~---~~~~~D~v~~~~~~~~~~~i~~l~-g  168 (412)
T 4dnj_A           94 RPPSLILEADPPAHTRTRAV-LSKVLSPATMKRLRDGFAAAADAKIDELLA---RGGNIDAIADLAEAYPLSVFPDAM-G  168 (412)
T ss_dssp             SCCCTTTTCCTTHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHHHHHHHHH---TTSEEETCCCCCCHHHHHHHHHHH-T
T ss_pred             cCCCccccCChHHHHHHHhh-cccccCHHHHHHhhHHHHHHHHHHHHhhhc---cCCCceeHHHHHhhhhHhHHHHHc-C
Confidence            22345667789999999999 689999999999999999999999999876   35677754 455667777777654 6


Q ss_pred             ccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHH
Q 047291          204 KKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVD  283 (511)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  283 (511)
                      .+..+.+.+.............         .          ....+........+...+.+..++.     ....+.++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~---------~----------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  224 (412)
T 4dnj_A          169 LKQEGRENLLPYAGLVFNAFGP---------P----------NELRQSAIERSAPHQAYVAEQCQRP-----NLAPGGFG  224 (412)
T ss_dssp             CCSTTGGGHHHHHHHHHHHTSC---------S----------SHHHHHHHHTCHHHHHHHHHHTSGG-----GSCTTSHH
T ss_pred             Cchhhhhhhhhhhhcccccccc---------c----------HHHHHHHHHHHHHHHHHHHHHHHhh-----ccccccch
Confidence            5544444444443333222110         0          0011111111122222333333221     12223455


Q ss_pred             HHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchh
Q 047291          284 ILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEY  363 (511)
Q Consensus       284 ~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~  363 (511)
                      .++....++   .+++++++.+++..+++||+|||+++++|++++|++||++|+||++|                  ..+
T Consensus       225 ~l~~~~~~~---~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~------------------~~~  283 (412)
T 4dnj_A          225 ACIHAFSDT---GEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD------------------PSL  283 (412)
T ss_dssp             HHHHHTTTT---TSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGG
T ss_pred             hhhHhhhhc---cchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhC------------------ccc
Confidence            555544433   36999999999999999999999999999999999999999999986                  467


Q ss_pred             HHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCccee
Q 047291          364 LKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYI  443 (511)
Q Consensus       364 l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~  443 (511)
                      +.++++|++|++|+++.. +|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||.          ..++
T Consensus       284 ~~~~~eE~lR~~pp~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~----------~~~l  352 (412)
T 4dnj_A          284 ARNAFEEAVRFESPVQTF-FRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT----------SGHV  352 (412)
T ss_dssp             HHHHHHHHHHHHCSBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC----------TTCC
T ss_pred             cccccceeeeecCCcccc-cccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC----------CCCC
Confidence            899999999999999886 49999999999999999999999999999999999999999999973          2579


Q ss_pred             ecCCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCCCCCCCCCCccccCceecccCceeEEeec
Q 047291          444 PFGAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGDTVGEDLDMTETFGLTVFKKIPLYLVPVM  508 (511)
Q Consensus       444 ~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (511)
                      |||+|+|.|+|++||++|++++++.|+++| ++++.++     +.+..  +.+++....+.|+++|
T Consensus       353 pFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~-----~~~~~--~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          353 GFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP-----LKRRF--NNTLRGLESLPIQLTP  411 (412)
T ss_dssp             TTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC-----CEEEE--CSSBEEEEECEEEEEE
T ss_pred             CcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC-----Ceeec--CCCccCCcceeEEEEe
Confidence            999999999999999999999999999999 8998753     22332  3334555556665543


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=1.2e-48  Score=374.18  Aligned_cols=356  Identities=12%  Similarity=0.135  Sum_probs=266.5

Q ss_pred             CCCCcHHHHHHHHhhC-CcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCccchhhhccCCceeEecCCchhHHHH
Q 047291           63 GNLPHRSLRALSKKYG-PLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTTAADIFLYGCIDIAFSPYGEYWREI  141 (511)
Q Consensus        63 ~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (511)
                      ..+++..+.+++++.+ +++....+ ...++|++++++++|+++.. .|+......... ........+...|+++|+++
T Consensus        36 ~~~~~~~~~~lr~~~~~~~~~~~~~-gg~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~-~~~~~~~~~~~~D~p~H~r~  112 (417)
T 4dxy_A           36 EDGYHEAWKKVQHPGIPDLIWTPFT-GGHWIATNGDTVKEVYSDPT-RFSSEVIFLPKE-AGEKAQMVPTKMDPPEHTPY  112 (417)
T ss_dssp             GGCHHHHHHHHSCTTCCSEEEESST-TSEEEECSHHHHHHHHTCTT-TEESSCCSSSTT-SSCSSCTTTTTCCTTTHHHH
T ss_pred             hcChHHHHHHHHhhCCCCEEecCCC-CCEEEECCHHHHHHHHcCch-hccCCCcccccc-cccccccCcccCCcHHHHHH
Confidence            3467777877776554 45554433 35789999999999997543 354432221111 11112233456689999999


Q ss_pred             HHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHH
Q 047291          142 RRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEMLLTVTNDTVGRCVFGKKANEESKFGTISRRLTT  221 (511)
Q Consensus       142 R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~  221 (511)
                      |+. +.+.|+++.++.+.+.+.+.++++++.+..    ++++|+...+.......+...++|.+..+.+.+......+..
T Consensus       113 Rrl-l~~~Fs~~~l~~~~~~i~~~~~~lld~l~~----~g~~D~v~~~a~~l~~~vi~~llg~~~~d~~~~~~~~~~~~~  187 (417)
T 4dxy_A          113 RKA-LDKGLNLAKIRKVEDKVREVASSLIDSFAA----RGECDFAAEYAELFPVHVFMALADLPLEDIPVLSEYARQMTR  187 (417)
T ss_dssp             HHH-HHHHHCHHHHHTTHHHHHHHHHHHHHHHHT----TSEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHS
T ss_pred             HHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHhhh----cCCeeeHHHHHhhhHHHHHHHHcCCCHHHHHHHHhhhhhhcc
Confidence            999 689999999999999999999999998875    467898766654444444445678876555555444433321


Q ss_pred             hccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccHHHHHHHhccccccccCCChH
Q 047291          222 QLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLERPDDKSVAKDFVDILLQVQKDATTKHELSQE  301 (511)
Q Consensus       222 ~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~  301 (511)
                      ....      .|        .........+...+..++.++++++++       ...+|+++.|+.+..++   ..++++
T Consensus       188 ~~~~------~~--------~~~~~~~~~~~~~~~~~~~~li~~rr~-------~~~ddl~s~L~~~~~~~---~~~~~~  243 (417)
T 4dxy_A          188 PEGN------TP--------EEMATDLEAGNNGFYAYVDPIIRARVG-------GDGDDLITLMVNSEING---ERIAHD  243 (417)
T ss_dssp             CCCS------SH--------HHHHHHHHHHHHHHHHHHHHHHHHHTT-------CCCCSHHHHHHTCEETT---EECCHH
T ss_pred             cccc------Ch--------HHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCccchhhhhccccccC---Cccchh
Confidence            1100      00        012234556777888888888888763       34568999998775543   368999


Q ss_pred             HHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCCCCCCccc
Q 047291          302 NLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRLHAPAPLL  381 (511)
Q Consensus       302 ~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~  381 (511)
                      ++.+++..+++||+|||+++++|++++|++||++++++++|...+                  ..++ |.+|++++.+..
T Consensus       244 e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------------~~av-ee~~~~~~~~~~  304 (417)
T 4dxy_A          244 KAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MRGA-EEMFRRFPVVSE  304 (417)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------------HHTH-HHHHHHSCCBEE
T ss_pred             HHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------------ccce-eeeecccccccc
Confidence            999999999999999999999999999999999999999985433                  1233 444444444443


Q ss_pred             cccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCcceeecCCCCCCCCCchHHHHH
Q 047291          382 VHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNNPVNFMGEDFHYIPFGAGRRGCPGTLFGVTS  461 (511)
Q Consensus       382 ~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e  461 (511)
                       .|.+++|++++|+.||+|+.|+++.+++||||++|+||++|||+|+          +..++|||+|+|.|+|++||++|
T Consensus       305 -~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~----------~~~~l~FG~G~r~ClG~~LA~~E  373 (417)
T 4dxy_A          305 -ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR----------SISHSTFGGGPHRCAGMHLARME  373 (417)
T ss_dssp             -EEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHHHHHH
T ss_pred             -ccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC----------CCCCCCcCCCcccCccHHHHHHH
Confidence             5999999999999999999999999999999999999999999992          34579999999999999999999


Q ss_pred             HHHHHHHhHhhc-ccccCCC
Q 047291          462 AEGVVANLLYWF-DWKLPGD  480 (511)
Q Consensus       462 ~~~~la~ll~~f-~~~~~~~  480 (511)
                      ++++++.|+++| +++++++
T Consensus       374 ~~i~l~~Ll~rfp~~~l~~~  393 (417)
T 4dxy_A          374 VIVTLEEWLKRIPEFSFKEG  393 (417)
T ss_dssp             HHHHHHHHHHHCSSCEECTT
T ss_pred             HHHHHHHHHHhCCCceeCCC
Confidence            999999999999 8998765


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.8e-46  Score=350.73  Aligned_cols=312  Identities=15%  Similarity=0.131  Sum_probs=214.3

Q ss_pred             CCCC-CCCCCccccccc-----CCCCCcHHHHHHHHhhCCcEEEeecCcCEEEecCHHHHHHHHHhcCcccccCCCcc-c
Q 047291           46 LPPC-PPKLPIIGNLHQ-----LGNLPHRSLRALSKKYGPLMLIHWGQTPTVIVSSADMAKEMMKTHDIIFSNRPKTT-A  118 (511)
Q Consensus        46 ~~pg-p~~~p~iG~~~~-----~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~i~~i~~~~~~~~~~~~~~~-~  118 (511)
                      .||| ++++|++|+...     +..+++.++.+++++  ||+++.   .+.++|++++++++|+.++  .|+..+... .
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~  107 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE  107 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence            4566 446899997643     456899999999866  998875   4689999999999999863  455443211 0


Q ss_pred             h------hhhccCCceeEecCCchhHHHHHHHhhhccCChhHHhhhHHHHHHHHHHHHHHHHHhccCCCceeHHHHH-HH
Q 047291          119 A------DIFLYGCIDIAFSPYGEYWREIRRIGVHELLSPQRVQYFQFVRDEETADMINKLRRASLKGASVNLSEML-LT  191 (511)
Q Consensus       119 ~------~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~-~~  191 (511)
                      .      ..... + ..++..+++.|        .+.|+     . .+.+.+.++++++.+.      +++|+..++ ..
T Consensus       108 ~~~~~~~~~~~~-~-~~l~~~dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~------g~~Dl~~~~a~~  165 (381)
T 2yjn_B          108 WMRAAGAPPAEW-A-QPFRDVHAASW--------EGEVP-----D-VGELAESFAGLLPGAG------ARLDLVGDFAWQ  165 (381)
T ss_dssp             HHHHHTCCHHHH-T-HHHHHHHHCCC--------CSCCC-----C-CSCHHHHTSTTSCC------------CCCCCCTH
T ss_pred             cccccccccchh-h-hhhhhCCchhh--------hhccC-----C-hHHHHHHHHHHHHhcc------CcchHHHHHHHH
Confidence            0      00001 1 22344568888        45666     3 6677888888887764      368988665 69


Q ss_pred             HHHHhhhhhhccccccchhhHHHHHHHHHHhccccccccccccchhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 047291          192 VTNDTVGRCVFGKKANEESKFGTISRRLTTQLQAFSFGDVFPALGWMDHLTGLIPCVKATFRSLDAFFDDVIAEHRNLER  271 (511)
Q Consensus       192 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (511)
                      +++++++++ ||.+.++.    .....+....      + .+    +.  ...   ..+..                   
T Consensus       166 l~~~vi~~l-~G~~~~~~----~~~~~~~~~~------~-~~----~~--~~~---~~~~~-------------------  205 (381)
T 2yjn_B          166 VPVQGMTAV-LGAAGVLR----GAAWDARVSL------D-AQ----LS--PQQ---LAVTE-------------------  205 (381)
T ss_dssp             HHHHHHHTC------CCH----HHHHHHTTHH------H-HT----TS--CCC---HHHHH-------------------
T ss_pred             HHHHHHHHH-cCCCHHHH----HHHHHHHHhc------c-CC----CC--HHH---HHHHH-------------------
Confidence            999999995 99987543    1111110000      0 00    00  000   00000                   


Q ss_pred             CCCccccccHHHHHHHhccccccccCCChHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhcCCC
Q 047291          272 PDDKSVAKDFVDILLQVQKDATTKHELSQENLKAILLDMFVGGTDSTSTTMEWAMAELVKHPSTMKKAQEEVRRVVGKKL  351 (511)
Q Consensus       272 ~~~~~~~~~~~~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  351 (511)
                                 + .+..         +.+    ++++.+++||+|||+++++|++++|++||+++++|++|+        
T Consensus       206 -----------~-~~~~---------l~~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~--------  252 (381)
T 2yjn_B          206 -----------A-AVAA---------LPA----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDP--------  252 (381)
T ss_dssp             -----------H-HHHH---------CC------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC--------
T ss_pred             -----------H-HHHH---------HHH----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCH--------
Confidence                       0 0000         111    678889999999999999999999999999999999984        


Q ss_pred             cCCcccccCchhHHHHHhhhcCCCCCCccccccccCCcceecCeeeCCCcEEEeehHHhhcCCCCCCCCCCCCCCCcCCC
Q 047291          352 KVEASDINQMEYLKCVIKESLRLHAPAPLLVHRETSSSVKMGGYEIPAKTRVFANAWAIQRDPKLWDNPEEFIPERFYNN  431 (511)
Q Consensus       352 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  431 (511)
                                .|++++|+|+||++|+++.. +|.+.+|++++|+.||||+.|+++.+++|+||++|+||++|||+||.+ 
T Consensus       253 ----------~~l~~~i~E~LR~~pp~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~-  320 (381)
T 2yjn_B          253 ----------AAAQRTVAEVLRLHPALHLE-RRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA-  320 (381)
T ss_dssp             ----------C--HHHHHHHHHHSCSCSEE-EEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC-
T ss_pred             ----------HHHHHHhCeeeeecCCCcce-eEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC-
Confidence                      28999999999999999974 599999999999999999999999999999999999999999999974 


Q ss_pred             CCCCCCCCcceeecCCCCCCCCCchHHHHHHHHHHHHhHhhc-ccccCCC
Q 047291          432 PVNFMGEDFHYIPFGAGRRGCPGTLFGVTSAEGVVANLLYWF-DWKLPGD  480 (511)
Q Consensus       432 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f-~~~~~~~  480 (511)
                              ..++|||+| |.|+|++||++|++++++.|+++| ++++.++
T Consensus       321 --------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~  361 (381)
T 2yjn_B          321 --------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGP  361 (381)
T ss_dssp             --------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----C
T ss_pred             --------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence                    358999999 999999999999999999999999 9998754


No 78 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=53.36  E-value=10  Score=18.01  Aligned_cols=13  Identities=23%  Similarity=0.373  Sum_probs=10.5

Q ss_pred             hHHHHHHHHHHHH
Q 047291          334 STMKKAQEEVRRV  346 (511)
Q Consensus       334 ~~~~~lr~Ei~~~  346 (511)
                      ++|.++|.|+.+-
T Consensus         8 nlqkkirkelkqr   20 (26)
T 1m46_B            8 NLQKKIRKELKQR   20 (26)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5799999998753


No 79 
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=32.35  E-value=88  Score=20.50  Aligned_cols=38  Identities=13%  Similarity=0.132  Sum_probs=29.3

Q ss_pred             HHHHHHHHhhCCcEEEeec-------CcCEEEecCHHHHHHHHHh
Q 047291           68 RSLRALSKKYGPLMLIHWG-------QTPTVIVSSADMAKEMMKT  105 (511)
Q Consensus        68 ~~~~~~~~kyG~v~~~~~~-------~~~~vvv~~p~~i~~i~~~  105 (511)
                      ..+.+...+||+|..+.+.       |.-+|-..+++.++..+..
T Consensus        22 ~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~   66 (81)
T 2krb_A           22 NVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN   66 (81)
T ss_dssp             HHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred             HHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence            6688888999999888764       3446777888888887753


No 80 
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=32.17  E-value=36  Score=19.75  Aligned_cols=28  Identities=14%  Similarity=0.374  Sum_probs=18.1

Q ss_pred             hHHHHHHHHHHHHhcCCCcCCcccccCchhHHHHHhhhcCC
Q 047291          334 STMKKAQEEVRRVVGKKLKVEASDINQMEYLKCVIKESLRL  374 (511)
Q Consensus       334 ~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  374 (511)
                      ++++.+|.||+.+             +-..++|+-.|-.|-
T Consensus        15 EIL~E~RkElqK~-------------K~EIIeAi~~El~~~   42 (45)
T 1use_A           15 ELLEEVKKELQKV-------------KEEIIEAFVQELRKR   42 (45)
T ss_dssp             HHHHHHHHHHHHH-------------HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHH-------------HHHHHHHHHHHHHhc
Confidence            5677777777766             334567776665553


No 81 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.84  E-value=1e+02  Score=21.61  Aligned_cols=49  Identities=24%  Similarity=0.248  Sum_probs=36.1

Q ss_pred             ccccccCCC--CCcHHHHHHHHhhC-CcEEEeecCcCEEEecCHHHHHHHHHh
Q 047291           56 IGNLHQLGN--LPHRSLRALSKKYG-PLMLIHWGQTPTVIVSSADMAKEMMKT  105 (511)
Q Consensus        56 iG~~~~~~~--~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~p~~i~~i~~~  105 (511)
                      ++|+..-..  .....+.++..+|| +|..+ .+|+-+|...+.+.++..++.
T Consensus        14 V~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~   65 (96)
T 2diu_A           14 VYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKR   65 (96)
T ss_dssp             EESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred             EeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHH
Confidence            677654322  12345778999995 99888 568999999999999888753


No 82 
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.30  E-value=1.7e+02  Score=20.40  Aligned_cols=41  Identities=17%  Similarity=0.246  Sum_probs=31.5

Q ss_pred             CcHHHHHHHHhhCCcEEEeec--------CcCEEEecCHHHHHHHHHhc
Q 047291           66 PHRSLRALSKKYGPLMLIHWG--------QTPTVIVSSADMAKEMMKTH  106 (511)
Q Consensus        66 ~~~~~~~~~~kyG~v~~~~~~--------~~~~vvv~~p~~i~~i~~~~  106 (511)
                      -...+.++..+||+|..+.+.        |.-+|...+++.++..+..+
T Consensus        24 te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~   72 (103)
T 1s79_A           24 TLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP   72 (103)
T ss_dssp             CHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSS
T ss_pred             CHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcC
Confidence            346688888999999877653        44578888999999888743


Done!