BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047293
(246 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q946Y7|SYP61_ARATH Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1
Length = 245
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/246 (73%), Positives = 206/246 (83%), Gaps = 1/246 (0%)
Query: 1 MSSAQDPFYIVKEEIQDSINKLQSTFHQWENSASDPGEQVHLKKELLAGCESIEWQVDEL 60
MSSAQDPFYIVKEEIQDSI+KLQSTFH+WE + D G+Q H+ KEL+A C SIEWQVDEL
Sbjct: 1 MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDEL 60
Query: 61 DKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASGMRR 120
+KAI VA++DPSWYGID+ ELEKRRRWTS ARTQV ++K VL+G + G AS +RR
Sbjct: 61 EKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSS-GAGHASEVRR 119
Query: 121 ELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLT 180
ELMR+PNS +A +D+D F+QSESDRQ+LL+KQQDEELDELS SVQRIGGVGLT
Sbjct: 120 ELMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLT 179
Query: 181 IHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMILFLIALFIVLF 240
IHDELVAQE IIDEL TEMDST NRL+FVQKKV MVMKKA AKGQ+MMI FL+ LFI+LF
Sbjct: 180 IHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILF 239
Query: 241 VLVFLT 246
VLVFLT
Sbjct: 240 VLVFLT 245
>sp|Q5R6Q2|STX6_PONAB Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1
Length = 255
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 121/260 (46%), Gaps = 56/260 (21%)
Query: 3 SAQDPFYIVKEEIQDSINKLQSTFHQWENSASDPGEQVH-----LKKELLAGCESIEWQV 57
S +DPF++VK E+Q ++N Q F +W DP EL SIEW +
Sbjct: 2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDL 61
Query: 58 DELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMK-----------------K 100
++LD+ I + +P + +D EL R+ + ++ R V MK +
Sbjct: 62 EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNRQ 121
Query: 101 AVL--SGGAN-GVGTMSASG-MRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLL 156
A+L SG N GT G + REL R NSH FI+ + +Q L+
Sbjct: 122 ALLGDSGSQNWSTGTTDKYGRLDRELQR-ANSH---------------FIEEQQAQQQLI 165
Query: 157 VKQQDEELDELSASV-------QRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFV 209
V+QQDE+L+ +S S+ QRIGG EL Q ++++ E++ST +RLD V
Sbjct: 166 VEQQDEQLELVSGSIGVLKNMSQRIGG-------ELEEQAVMLEDFSHELESTQSRLDNV 218
Query: 210 QKKVAMVMKKASAKGQIMMI 229
KK+A V S + Q I
Sbjct: 219 MKKLAKVSHMTSDRRQWCAI 238
>sp|O43752|STX6_HUMAN Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1
Length = 255
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 121/260 (46%), Gaps = 56/260 (21%)
Query: 3 SAQDPFYIVKEEIQDSINKLQSTFHQWENSASDPGEQVH-----LKKELLAGCESIEWQV 57
S +DPF++VK E+Q ++N Q F +W DP EL SIEW +
Sbjct: 2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDL 61
Query: 58 DELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMK-----------------K 100
++LD+ I + +P + +D EL R+ + ++ R V MK +
Sbjct: 62 EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNRQ 121
Query: 101 AVL--SGGAN-GVGTMSASG-MRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLL 156
A+L SG N GT G + REL R NSH FI+ + +Q L+
Sbjct: 122 ALLGDSGSQNWSTGTTDKYGRLDRELQR-ANSH---------------FIEEQQAQQQLI 165
Query: 157 VKQQDEELDELSASV-------QRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFV 209
V+QQDE+L+ +S S+ QRIGG EL Q ++++ E++ST +RLD V
Sbjct: 166 VEQQDEQLELVSGSIGVLKNMSQRIGG-------ELEEQAVMLEDFSHELESTQSRLDNV 218
Query: 210 QKKVAMVMKKASAKGQIMMI 229
KK+A V S + Q I
Sbjct: 219 MKKLAKVSHMTSDRRQWCAI 238
>sp|Q5ZL19|STX6_CHICK Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1
Length = 254
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 41/248 (16%)
Query: 3 SAQDPFYIVKEEIQDSINKLQSTFHQWENSASDPG----EQVH-LKKELLAGCESIEWQV 57
S +DPF++VK E+Q ++N Q F +W DP E++ EL SIEW +
Sbjct: 2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSIATREEIDWTTNELRNNLRSIEWDL 61
Query: 58 DELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGV------- 110
++LD+ I + +P + +D EL R+ + ++ R V MK + + +
Sbjct: 62 EDLDETISIVEANPRKFNLDATELGIRKSFITSTRQVVREMKDQMSNSSMQALAERKNRQ 121
Query: 111 -------------GTMSASGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLV 157
G S + REL +L NSH FI+ + +Q L+V
Sbjct: 122 ALLGESSSQSWSSGPDKYSRLDREL-QLANSH---------------FIEEQQAQQQLIV 165
Query: 158 KQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVM 217
+QQDE+L+ +S S+ + + I EL Q ++D+ E+DST +RLD V KK+A V
Sbjct: 166 EQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELDSTHSRLDNVMKKLAKVS 225
Query: 218 KKASAKGQ 225
S + Q
Sbjct: 226 HMTSDRRQ 233
>sp|Q63635|STX6_RAT Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1
Length = 255
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 3 SAQDPFYIVKEEIQDSINKLQSTFHQWENSASDPGEQVH-----LKKELLAGCESIEWQV 57
S +DPF++VK E+Q ++N Q F +W P EL SIEW +
Sbjct: 2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDL 61
Query: 58 DELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASG 117
++LD+ I + +P + +D EL R+ + ++ R V MK + A+ V ++
Sbjct: 62 EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQM---SASSVQALAERK 118
Query: 118 MRRELMRLPNSHQ---AKSNQYAAAQD-----NDDFIQSESDRQLLLVKQQDEELDELSA 169
R+ L+ +S +++Y N FI+ + +Q L+V+QQDE+L+ +S
Sbjct: 119 NRQALLGDSSSQNWDAGVTDRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSG 178
Query: 170 SVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMI 229
S+ + + I EL Q ++D+ E++ST +RLD V KK+A V S + Q I
Sbjct: 179 SIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAI 238
>sp|Q9JKK1|STX6_MOUSE Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1
Length = 255
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 3 SAQDPFYIVKEEIQDSINKLQSTFHQWENSASDPGEQVH-----LKKELLAGCESIEWQV 57
S +DPF++VK E+Q ++N Q F +W P EL SIEW +
Sbjct: 2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDL 61
Query: 58 DELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASG 117
++LD+ I + +P + +D EL R+ + ++ R V MK + A+ V ++
Sbjct: 62 EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQM---SASSVQALAERK 118
Query: 118 MRRELMRLPNS---HQAKSNQYAAAQD-----NDDFIQSESDRQLLLVKQQDEELDELSA 169
R+ L+ +S + +++Y N FI+ + +Q L+V+QQDE+L+ +S
Sbjct: 119 NRQALLGDSSSQSWNAGVADRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSG 178
Query: 170 SVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMI 229
S+ + + I EL Q ++D+ E++ST +RLD V KK+A V S + Q I
Sbjct: 179 SIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAI 238
>sp|O60499|STX10_HUMAN Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1
Length = 249
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 120/234 (51%), Gaps = 10/234 (4%)
Query: 3 SAQDPFYIVKEEIQDSINKLQSTFHQW-----ENSASDPGEQVHLKKELLAGCESIEWQV 57
S +DPF++V+ E+Q ++N + + +W E++A E EL G SIEW +
Sbjct: 2 SLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDL 61
Query: 58 DELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASG 117
++L++ IG+ +P + + +L++R+ + R V MK ++S A V + +
Sbjct: 62 EDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTA--VAFLERNN 119
Query: 118 MRRELMRLPNSHQAKSN--QYAAAQDNDDFIQSESDRQLLLVKQQDEELDELSASVQRIG 175
R L P + ++ S+ +A +I+ + Q L++ +QD++L+ +S S+Q +
Sbjct: 120 -REILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLK 178
Query: 176 GVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMI 229
+ + +EL Q ++D EMD T +R+D V +K+A V S + Q I
Sbjct: 179 HMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAI 232
>sp|P83528|STX5_CAEEL Putative syntaxin C15C7.1 OS=Caenorhabditis elegans GN=C15C7.1 PE=3
SV=1
Length = 122
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 152 RQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQK 211
RQ ++++QD+EL+ + SV+ + G+ I DEL Q ++D+LG EM+ + RLD K
Sbjct: 29 RQEQIIQEQDDELELVGNSVRTLRGMSSMIGDELDQQSTMLDDLGQEMEYSETRLDTAMK 88
Query: 212 KVAMVMKKASAKGQIMMILFLIA 234
K+A + Q MI+ L A
Sbjct: 89 KMAKLTHLEDESSQCKMIMVLSA 111
>sp|Q9SA23|SYP51_ARATH Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1
Length = 232
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 76 IDDIELEKRRRWTSTARTQVSSMKKAV-LSGGANGVGTMSASGMRRELMRLPNSHQAKSN 134
I + E+ +R+ R++ + M A+ +S AN R+ + P+ S
Sbjct: 72 ISEKEMNRRKDMVGNLRSKANQMANALNMSNFAN-----------RDSLLGPDIKPDDSM 120
Query: 135 QYAAAQDNDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDE 194
DN + + RQ++ ++QDE L++L +V + L + +EL Q +ID+
Sbjct: 121 SRVTGMDNQGIVGYQ--RQVM--REQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDD 176
Query: 195 LGTEMDSTSNRLDFVQKKVAMVMKK----ASAKGQIMMILFLIALFIVLFVLV 243
L +D T +RL VQK +A++ K S ++ +L ++ L +V+++LV
Sbjct: 177 LDYHVDVTDSRLRRVQKSLAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLV 229
>sp|Q94KK7|SYP52_ARATH Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1
Length = 233
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 28/142 (19%)
Query: 130 QAKSNQYAAAQDNDDFIQSES------------------DRQLLLV------KQQDEELD 165
++K+NQ A+A + +F +S D Q ++V ++QDE L+
Sbjct: 89 RSKTNQVASALNMSNFANRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQDEGLE 148
Query: 166 ELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKK----AS 221
+L +V + L +++EL Q +ID+L ++D T +RL VQK +A++ K S
Sbjct: 149 KLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLRRVQKSLALMNKSMKSGCS 208
Query: 222 AKGQIMMILFLIALFIVLFVLV 243
++ +L ++ L +V+++LV
Sbjct: 209 CMSMLLSVLGIVGLALVIWLLV 230
>sp|Q553P5|STX8A_DICDI Syntaxin-8A OS=Dictyostelium discoideum GN=syn8A PE=1 SV=1
Length = 152
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 157 VKQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMV 216
+++QD+ LD LS S+ R+ +TI+ Q +++DEL +DSTS R+ K + +
Sbjct: 63 MEEQDKMLDALSGSISRVKDTAITINKTAQEQTDMLDELDVHVDSTSARMRNTTKNLITL 122
Query: 217 MKKASAKGQIMMILF 231
+++ G I F
Sbjct: 123 TQQSKTTGYCSAICF 137
>sp|Q94CG2|BET12_ARATH Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4
Length = 130
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 158 KQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVM 217
+ DE L+ L V + V IH+E+ ++D++G +MDS + + +V
Sbjct: 37 RDNDEALENLQDRVSFLKRVTGDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVF 96
Query: 218 KKASAKGQIMMILFLIALFIVLFVLVFL 245
+K S + +I + + LF++++ L+ L
Sbjct: 97 EKKSNRKSCKLIAYFVLLFLIMYYLIRL 124
>sp|Q9HGN3|TLG1_SCHPO t-SNARE affecting a late Golgi compartment protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tlg1 PE=3 SV=1
Length = 225
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 5 QDPFYIVKEEIQDS---INKLQSTFHQWENSASDPGEQVHLKKELLAGCESIEWQVDELD 61
+DPFY VK + + + KL ++F NS + EL + + + +L
Sbjct: 2 EDPFYEVKADASNQMEQVRKLYNSFMAARNSGV-----LSPNTELTYAIDELSETLKDLK 56
Query: 62 KAIGVASRDPSWYGIDDIELEKRRRWTS 89
A+ +A ++ +G+D+ EL+ RRR+ S
Sbjct: 57 AAVEIAMKNSEHFGLDEEELKSRRRFVS 84
>sp|Q9UNK0|STX8_HUMAN Syntaxin-8 OS=Homo sapiens GN=STX8 PE=1 SV=2
Length = 236
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 161 DEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKA 220
D LD LS+ + R +G I +EL Q IID+L +++T +L ++V MV +K+
Sbjct: 152 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRVNMVDRKS 211
Query: 221 SAKGQIMMI 229
++ G IM+I
Sbjct: 212 ASCGMIMVI 220
>sp|O14222|FSV1_SCHPO Syntaxin-like protein fsv1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=fsv1 PE=2 SV=3
Length = 247
Score = 38.5 bits (88), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 156 LVKQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAM 215
++ +Q+E L + ASVQR +G ++ EL Q ++D + + D R D + ++
Sbjct: 161 MLNEQEESLGGIEASVQRQKRMGYAMNTELSEQNVLLDNMNNDADRIERRFDHAKNRLNK 220
Query: 216 VMKKASAKGQIMMI 229
V +KA + +I
Sbjct: 221 VSRKAKQYPRCFII 234
>sp|O88983|STX8_MOUSE Syntaxin-8 OS=Mus musculus GN=Stx8 PE=1 SV=1
Length = 236
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 161 DEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKA 220
D LD LS+ + R +G I +EL Q IID+L +++T +L ++V +V +K+
Sbjct: 152 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTEARRVTLVDRKS 211
Query: 221 SAKGQIMMI 229
++ G IM+I
Sbjct: 212 TSCGMIMVI 220
>sp|Q9Z2Q7|STX8_RAT Syntaxin-8 OS=Rattus norvegicus GN=Stx8 PE=1 SV=1
Length = 236
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 161 DEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKA 220
D LD LS+ + R +G I +EL Q IID+L +++T +L ++V +V +K+
Sbjct: 152 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTEARRVTLVDRKS 211
Query: 221 SAKGQIMMI 229
++ G IM+I
Sbjct: 212 ASCGMIMVI 220
>sp|Q3T075|STX8_BOVIN Syntaxin-8 OS=Bos taurus GN=STX8 PE=2 SV=1
Length = 236
Score = 37.7 bits (86), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 161 DEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKA 220
D LD LS+ + R +G I +EL Q IID+L +++T +L ++V +V +K+
Sbjct: 152 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTETRRVNLVDRKS 211
Query: 221 SAKGQIMMI 229
++ G IM+I
Sbjct: 212 TSCGMIMVI 220
>sp|P32912|VAM7_YEAST Vacuolar morphogenesis protein 7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=VAM7 PE=1 SV=1
Length = 316
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 89 STARTQVSSMKKAVLSGGANGVGTMSASGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQS 148
ST T+ +++ +++L + +GT + + R L+ + S + + + + N+D Q
Sbjct: 191 STEVTRRAALLRSLLKE-CDDIGTANIAQDRGRLLGVATSDNSSTTE-VQGRTNNDLQQG 248
Query: 149 ESDRQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDF 208
Q+ +V+ Q++EL L +Q G+ L +++EL Q ++ L ++D+T RL
Sbjct: 249 ----QMQMVRDQEQELVALHRIIQAQRGLALEMNEELQTQNELLTALEDDVDNTGRRLQI 304
Query: 209 VQKKV 213
KK
Sbjct: 305 ANKKA 309
>sp|Q9M2J9|BET11_ARATH Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1
Length = 122
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 33/63 (52%)
Query: 181 IHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMILFLIALFIVLF 240
I++E+ ++D +G +MDS+ L + V + S++ + ++ + LF+V++
Sbjct: 59 INEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIY 118
Query: 241 VLV 243
L
Sbjct: 119 YLT 121
>sp|O15155|BET1_HUMAN BET1 homolog OS=Homo sapiens GN=BET1 PE=1 SV=1
Length = 118
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 157 VKQQDEELDE-LSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAM 215
++++E L E L + V I + + I E+ Q ++ E+ ++ DST+ L K+ +
Sbjct: 28 CEEENERLTESLRSKVTAIKSLSIEIGHEVKTQNKLLAEMDSQFDSTTGFLGKTMGKLKI 87
Query: 216 VMKKASAKGQIMMILFLIALFIVLFVLV 243
+ + + K M+LF + +F +++ ++
Sbjct: 88 LSRGSQTKLLCYMMLFSLFVFFIIYWII 115
>sp|A9AXP4|DNLJ_HERA2 DNA ligase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM
785) GN=ligA PE=3 SV=1
Length = 673
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 33/154 (21%)
Query: 76 IDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASGMRRELMRLPNSHQAKSNQ 135
++ IE KRR + + + + G NGVGT++A+ + R LP QA Q
Sbjct: 500 LNAIEESKRR-----------PLDRVITALGINGVGTVAAADLARYFRSLPALAQATIEQ 548
Query: 136 YAA--------AQDNDDFIQSESDRQL------LLVKQQDEELDELSASVQRIGGVGLTI 181
A AQ DF + +++QL L +K + E+ EL + R+ G I
Sbjct: 549 LTAIEGIGGSTAQSVVDFFNTPANQQLIAELLALGLKAEPSEVAELQS--DRLAGKSFVI 606
Query: 182 HDELV-----AQENIIDELGTEM-DSTSNRLDFV 209
L A + +I+ G ++ S S + D++
Sbjct: 607 TGTLPGISREAAQALIEAHGGKVGGSVSKKTDYL 640
>sp|Q0II86|SNP29_BOVIN Synaptosomal-associated protein 29 OS=Bos taurus GN=SNAP29 PE=2
SV=1
Length = 258
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 99 KKAVLSGGANGVGTMSASGMRRELMRLPNSHQAKSNQYAAA-------QDNDDF------ 145
K A NG T SG ++ + NS + + QY A+ QD+D
Sbjct: 126 KPAETPSAQNGTLTPQPSGRLKDAI---NSSKEQEAQYQASHPNLRKLQDSDSIPGGAGS 182
Query: 146 -IQSES---DRQLLLVKQQ-DEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMD 200
+ SE+ + L Q+ D LDELS + R+ + L I E+ Q++I+D L +++D
Sbjct: 183 AVSSEAYPRNPHLRACHQRIDSNLDELSVGLGRLKDIALGIQTEIDEQDDILDRLTSKVD 242
Query: 201 STSNRLDFVQKKV 213
+ ++KV
Sbjct: 243 KLDVSITSTERKV 255
>sp|Q9Z2P6|SNP29_RAT Synaptosomal-associated protein 29 OS=Rattus norvegicus GN=Snap29
PE=1 SV=1
Length = 257
Score = 34.7 bits (78), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 161 DEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKV 213
D LDELS + R+ + L + E+ Q++I+D L T++D + +KKV
Sbjct: 202 DSNLDELSVGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTEKKV 254
>sp|Q6LMT5|TRUD_PHOPR tRNA pseudouridine synthase D OS=Photobacterium profundum GN=truD
PE=3 SV=2
Length = 352
Score = 34.7 bits (78), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 12 KEEIQDSINKLQSTFHQWENSASD-PGEQVHLKKELLAGCESIEWQVDELDKAIGVASRD 70
K Q I L F EN + G+ H ++ E+ ++ V+EL KA GV SRD
Sbjct: 14 KPTCQGQIKALPEHFIVKENLGFEFAGKGEHFMVKIRKVGENTKYVVNELAKACGVKSRD 73
Query: 71 PSWYGIDD 78
SW G+ D
Sbjct: 74 VSWAGLKD 81
>sp|Q03322|TLG1_YEAST T-SNARE affecting a late Golgi compartment protein 1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TLG1 PE=1 SV=1
Length = 224
Score = 34.7 bits (78), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 1 MSSAQDPFYIVKEEIQDSINKLQSTFHQWENSASDPGEQVHLKKELLAGCESIEWQVDEL 60
M++++DPF V ++ ++ +N++ + + N+A D ++ ++ L + +E + +L
Sbjct: 1 MNNSEDPFQQVVKDTKEQLNRI-NNYITRHNTAGDDDQEEEIQDIL----KDVEETIVDL 55
Query: 61 DKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASGMRR 120
D++I V RD + ++ R + Q+ ++K T
Sbjct: 56 DRSIIVMKRDENE------DVSGREAQVKNIKQQLDALKLRFDRRIQESTQTT------- 102
Query: 121 ELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLT 180
+ L + + + + A++ND + + Q+L ++QD LD + ++Q + T
Sbjct: 103 --IPLEETVENSTLNTSMAENNDGGMSNPFQEQML--REQDVHLDGIHKTMQNLHIQAQT 158
Query: 181 IHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAK 223
+ DEL Q ++D + MD N+L ++++ V +K K
Sbjct: 159 MGDELENQGQLLDNMDEGMDGVVNKLARGRRQLEWVYEKNKEK 201
>sp|Q08144|TLG2_YEAST T-SNARE affecting a late Golgi compartment protein 2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TLG2 PE=1 SV=1
Length = 397
Score = 34.7 bits (78), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 157 VKQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKV--A 214
++++DEE+ +L+ V + + + D +V Q I+D + +++T L K++ A
Sbjct: 247 LRERDEEITQLARGVLEVSTIFREMQDLVVDQGTIVDRIDYNLENTVVELKSADKELNKA 306
Query: 215 MVMKKASAKGQIMMILFLIALFIVLFVLV 243
+K + K +++++L L + + FV++
Sbjct: 307 THYQKRTQKCKVILLLTLCVIALFFFVML 335
>sp|Q87LQ4|TRUD_VIBPA tRNA pseudouridine synthase D OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=truD PE=3 SV=1
Length = 347
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 37 GEQVHLKKELLAGCESIEWQVDELDKAIGVASRDPSWYGIDD 78
GE HL + E+ + +EL KA GV S+D SW G+ D
Sbjct: 40 GEGEHLMVRIRKTGENTSFVANELAKACGVKSKDVSWAGLKD 81
>sp|Q5R5K4|SNP29_PONAB Synaptosomal-associated protein 29 OS=Pongo abelii GN=SNAP29 PE=2
SV=1
Length = 258
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 161 DEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKV 213
D LDELS + R+ + L + E+ Q++I+D L T++D + ++KV
Sbjct: 203 DSNLDELSVGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKV 255
>sp|Q94KK6|SYP72_ARATH Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 SV=1
Length = 267
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 140 QDNDD--FIQSESDRQL-----LLVKQQDEELDELSASVQRIGGVGLTIHDELVAQENII 192
+D DD F QSE Q + K+QDE LD +S + + + +++EL Q ++
Sbjct: 152 EDMDDGFFQQSEESSQFRQEYEMRRKKQDEGLDIISEGLDALKNLARDMNEELDKQVPLM 211
Query: 193 DELGTEMDSTSNRLD--FVQKKVAMVMKKASAKGQIMMILFLIALFIVLFV 241
+E+ T++D ++ L V+ K +V ++S I +IL + L IV ++
Sbjct: 212 EEMETKVDGATSDLKNTNVRLKKQLVQMRSSRNFCIDIILLCVILGIVSYI 262
>sp|A7MTT9|TRUD_VIBHB tRNA pseudouridine synthase D OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=truD PE=3 SV=1
Length = 347
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 37 GEQVHLKKELLAGCESIEWQVDELDKAIGVASRDPSWYGIDD 78
GE HL + E+ + +EL KA GV S+D SW G+ D
Sbjct: 40 GEGEHLLVRIRKTGENTSFVANELAKACGVKSKDVSWAGLKD 81
>sp|O95721|SNP29_HUMAN Synaptosomal-associated protein 29 OS=Homo sapiens GN=SNAP29 PE=1
SV=1
Length = 258
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 161 DEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKV 213
D LDELS + R+ + L + E+ Q++I+D L T++D + ++KV
Sbjct: 203 DSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKV 255
>sp|O35623|BET1_MOUSE BET1 homolog OS=Mus musculus GN=Bet1 PE=3 SV=1
Length = 118
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 44/86 (51%)
Query: 158 KQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVM 217
++ D + L + V I + + I E+ Q ++ E+ ++ DST+ L ++ ++
Sbjct: 30 EENDRLTESLRSKVTAIKSLSIEIGHEVKNQNKLLAEMDSQFDSTTGFLGKTMGRLKILS 89
Query: 218 KKASAKGQIMMILFLIALFIVLFVLV 243
+ + K M+LF + +F V++ ++
Sbjct: 90 RGSQTKLLCYMMLFSLFVFFVIYWII 115
>sp|Q62896|BET1_RAT BET1 homolog OS=Rattus norvegicus GN=Bet1 PE=1 SV=1
Length = 118
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 44/86 (51%)
Query: 158 KQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVM 217
++ D + L + V I + + I E+ Q ++ E+ ++ DST+ L ++ ++
Sbjct: 30 EENDRLTESLRSKVTAIKSLSIEIGHEVKNQNKLLAEMDSQFDSTTGFLGKTMGRLKILS 89
Query: 218 KKASAKGQIMMILFLIALFIVLFVLV 243
+ + K M+LF + +F V++ ++
Sbjct: 90 RGSQTKLLCYMMLFSLFVFFVIYWII 115
>sp|P23685|NAC1_CANFA Sodium/calcium exchanger 1 OS=Canis familiaris GN=SLC8A1 PE=1 SV=1
Length = 970
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 26/181 (14%)
Query: 50 CESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRW---TSTARTQVSSMKKAVLSGG 106
C +E+Q DE+ K I V IDD E EK + + R S KKA+L
Sbjct: 589 CGELEFQNDEIVKTISVKV-------IDDEEYEKNKTFFLEIGEPRLVEMSEKKALL--- 638
Query: 107 ANGVGTMSASGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLVKQQDEELDE 166
N +G + +G + L P + + ++ + D+Q L K+++E
Sbjct: 639 LNELGGFTITG--KYLYGQPVFRKVHAREHPIPSTVITIAEEYDDKQPLTSKEEEE---- 692
Query: 167 LSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAKGQI 226
+RI +G I E E II+E E ST ++L + +A+V+ S + Q
Sbjct: 693 -----RRIAEMGRPILGEHTKLEVIIEE-SYEFKSTVDKL-IKKTNLALVVGTNSWREQF 745
Query: 227 M 227
+
Sbjct: 746 I 746
>sp|P22804|BET1_YEAST Protein transport protein BET1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BET1 PE=1 SV=1
Length = 142
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 156 LVKQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAM 215
L Q +E++ + ++ + + L + DE+ ID+LG +TS +L ++
Sbjct: 54 LESQSEEQMGAMGQRIKALKSLSLKMGDEIRGSNQTIDQLGDTFHNTSVKL---KRTFGN 110
Query: 216 VMKKASAKGQIMMILFLIALFI--VLFVLVFLT 246
+M+ A G I + +LI F+ VLF V++T
Sbjct: 111 MMEMARRSG-ISIKTWLIIFFMVGVLFFWVWIT 142
>sp|Q9ERB0|SNP29_MOUSE Synaptosomal-associated protein 29 OS=Mus musculus GN=Snap29 PE=1
SV=1
Length = 260
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 161 DEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKV 213
D LDELS + + + L + E+ Q++I+D L T++D + +KKV
Sbjct: 205 DSNLDELSVGLGHLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTEKKV 257
>sp|Q9T1V0|VPS_BPMU Tail fiber protein OS=Enterobacteria phage Mu GN=S PE=3 SV=1
Length = 504
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 155 LLVKQQDEELDELSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVA 214
LL+K E+ AS QR L I+D + ++ ++ +L + DS S L K V
Sbjct: 83 LLIKNNLSEIKTAGASAQRTARENLDIYDASLNKKGLV-QLTSATDSPSETLAATAKAVK 141
Query: 215 MVMKKASAK 223
+ M A+A+
Sbjct: 142 IAMDNANAR 150
>sp|P32418|NAC1_HUMAN Sodium/calcium exchanger 1 OS=Homo sapiens GN=SLC8A1 PE=1 SV=3
Length = 973
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 26/181 (14%)
Query: 50 CESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRW---TSTARTQVSSMKKAVLSGG 106
C +E+Q DE+ K I V IDD E EK + + R S KKA+L
Sbjct: 592 CGELEFQNDEIVKTISVKV-------IDDEEYEKNKTFFLEIGEPRLVEMSEKKALL--- 641
Query: 107 ANGVGTMSASGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLVKQQDEELDE 166
N +G + +G + L P + + ++ D+Q L K+++E
Sbjct: 642 LNELGGFTITG--KYLFGQPVFRKVHAREHPILSTVITIADEYDDKQPLTSKEEEE---- 695
Query: 167 LSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAKGQI 226
+RI +G I E E II+E E ST ++L + +A+V+ S + Q
Sbjct: 696 -----RRIAEMGRPILGEHTKLEVIIEE-SYEFKSTVDKL-IKKTNLALVVGTNSWREQF 748
Query: 227 M 227
+
Sbjct: 749 I 749
>sp|Q7MHQ6|TRUD_VIBVY tRNA pseudouridine synthase D OS=Vibrio vulnificus (strain YJ016)
GN=truD PE=3 SV=2
Length = 347
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 37 GEQVHLKKELLAGCESIEWQVDELDKAIGVASRDPSWYGIDD 78
G HL + E+ + +EL KA GV S+D SW G+ D
Sbjct: 40 GSGEHLMVRIRKTGENTSFVANELAKACGVKSKDVSWAGLKD 81
>sp|Q8DC58|TRUD_VIBVU tRNA pseudouridine synthase D OS=Vibrio vulnificus (strain CMCP6)
GN=truD PE=3 SV=1
Length = 347
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 37 GEQVHLKKELLAGCESIEWQVDELDKAIGVASRDPSWYGIDD 78
G HL + E+ + +EL KA GV S+D SW G+ D
Sbjct: 40 GSGEHLMVRIRKTGENTSFVANELAKACGVKSKDVSWAGLKD 81
>sp|P48766|NAC1_CAVPO Sodium/calcium exchanger 1 OS=Cavia porcellus GN=SLC8A1 PE=2 SV=1
Length = 970
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 26/181 (14%)
Query: 50 CESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRW---TSTARTQVSSMKKAVLSGG 106
C +E+Q DE+ K I V IDD E EK + + R S KKA+L
Sbjct: 589 CGELEFQNDEIVKTISVKV-------IDDEEYEKNKTFFLEIGEPRLVEMSEKKALL--- 638
Query: 107 ANGVGTMSASGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLVKQQDEELDE 166
N +G + +G + L P + + + D+Q L K+++E
Sbjct: 639 LNELGGFTITG--KHLYGQPVLRKVHARDHPIPSTVITIADEYDDKQPLTSKEEEE---- 692
Query: 167 LSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAKGQI 226
+RI +G I E E II+E E ST ++L + +A+V+ S + Q
Sbjct: 693 -----RRIAELGRPILGEHTKLEVIIEE-SYEFKSTVDKL-IKKTNLALVVGTNSWREQF 745
Query: 227 M 227
+
Sbjct: 746 I 746
>sp|P48765|NAC1_BOVIN Sodium/calcium exchanger 1 OS=Bos taurus GN=SLC8A1 PE=1 SV=1
Length = 970
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 26/181 (14%)
Query: 50 CESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRW---TSTARTQVSSMKKAVLSGG 106
C +E+Q DE+ K I V IDD E EK + + R S KKA+L
Sbjct: 589 CGELEFQNDEIVKTISVKV-------IDDEEYEKNKTFFLEIGEPRLVEMSEKKALL--- 638
Query: 107 ANGVGTMSASGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLVKQQDEELDE 166
N +G + +G + L P + + ++ D+Q L K+++E
Sbjct: 639 LNELGGFTITG--KYLYGQPVFRKVHAREHPLPSTIITIADEYDDKQPLTSKEEEE---- 692
Query: 167 LSASVQRIGGVGLTIHDELVAQENIIDELGTEMDSTSNRLDFVQKKVAMVMKKASAKGQI 226
+RI +G I E E II+E E ST ++L + +A+V+ S + Q
Sbjct: 693 -----RRIAEMGRPILGEHTRLEVIIEE-SYEFKSTVDKL-IKKTNLALVVGTNSWREQF 745
Query: 227 M 227
+
Sbjct: 746 I 746
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,415,836
Number of Sequences: 539616
Number of extensions: 3106668
Number of successful extensions: 13259
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 13137
Number of HSP's gapped (non-prelim): 186
length of query: 246
length of database: 191,569,459
effective HSP length: 114
effective length of query: 132
effective length of database: 130,053,235
effective search space: 17167027020
effective search space used: 17167027020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)