Your job contains 1 sequence.
>047297
MAQQPSSGGAVANLVPVISPQYCCPHPIDLAIVRKVTVLSSGNIDVKDTNDVSPLMERRR
VLLGGVGNRIVTLRLNTITQHNRWQVFRGESTERRHLIFSAKISSGWFSRTTKLDVFLAN
NTRKDACDFRVVKSSSRLSEPPSCTIYAGESSTIVDQCIPTLIVALILILDEINHARSSS
SSIGGVGGGVIGGFI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047297
(195 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081481 - symbol:AT3G11740 "AT3G11740" species... 244 7.9e-24 2
TAIR|locus:2181082 - symbol:AT5G01750 "AT5G01750" species... 272 1.1e-23 1
TAIR|locus:2055250 - symbol:LURP1 "AT2G14560" species:370... 235 9.2e-20 1
TAIR|locus:2086062 - symbol:AT3G16900 "AT3G16900" species... 171 5.6e-13 1
TAIR|locus:2078506 - symbol:AT3G56180 "AT3G56180" species... 147 2.0e-10 1
>TAIR|locus:2081481 [details] [associations]
symbol:AT3G11740 "AT3G11740" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AC016795 EMBL:BX825412
IPI:IPI00545966 RefSeq:NP_187780.2 UniGene:At.50173
ProteinModelPortal:Q9SF24 SMR:Q9SF24 PRIDE:Q9SF24
EnsemblPlants:AT3G11740.1 GeneID:820346 KEGG:ath:AT3G11740
TAIR:At3g11740 HOGENOM:HOG000242212 OMA:DINREDS
Genevestigator:Q9SF24 InterPro:IPR007612 InterPro:IPR025659
Pfam:PF04525 SUPFAM:SSF54518 Uniprot:Q9SF24
Length = 194
Score = 244 (91.0 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 58/149 (38%), Positives = 80/149 (53%)
Query: 17 VISPQYCCPHPIDLAIVRKVTVLSSGNIDVKDTND------VSPLMEXXXXXXXXXX--N 68
++SP +C P+PI+L IVRKV L+ GN V D N PL
Sbjct: 3 IVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAYDT 62
Query: 69 RIVTLRLNTITQHNRWQVFRGESTERRHLIFSAKISSGWFSRTTKLDVFLANNTRKDACD 128
I+TLR N ++ H+RW V+RG+ST++ L+++ K SS KLD+FLA+N CD
Sbjct: 63 PILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICD 122
Query: 129 FRVVKSSSRLSEPPSCTIYAGESSTIVDQ 157
F V S + SC +YAG+S IV Q
Sbjct: 123 FHV--KGSWIDR--SCVVYAGKSDAIVAQ 147
Score = 44 (20.5 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 9/12 (75%), Positives = 12/12 (100%)
Query: 163 IVALILILDEIN 174
IV+LI+ILD+IN
Sbjct: 177 IVSLIVILDDIN 188
>TAIR|locus:2181082 [details] [associations]
symbol:AT5G01750 "AT5G01750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0006569 "tryptophan catabolic process"
evidence=RCA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0009684 "indoleacetic acid
biosynthetic process" evidence=RCA] [GO:0030003 "cellular cation
homeostasis" evidence=RCA] [GO:0070838 "divalent metal ion
transport" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 EMBL:AL162351 HOGENOM:HOG000242212 InterPro:IPR007612
InterPro:IPR025659 Pfam:PF04525 SUPFAM:SSF54518 EMBL:AF372877
EMBL:AY142034 EMBL:AY085369 IPI:IPI00516693 IPI:IPI00533737
PIR:T48196 RefSeq:NP_568095.1 RefSeq:NP_850751.1 UniGene:At.21392
PDB:1ZXU PDB:2Q4M PDBsum:1ZXU PDBsum:2Q4M ProteinModelPortal:Q9LZX1
SMR:Q9LZX1 IntAct:Q9LZX1 STRING:Q9LZX1 PaxDb:Q9LZX1 PRIDE:Q9LZX1
DNASU:831684 EnsemblPlants:AT5G01750.2 GeneID:831684
KEGG:ath:AT5G01750 TAIR:At5g01750 eggNOG:NOG242955
InParanoid:Q9LZX1 OMA:TEMDIFL PhylomeDB:Q9LZX1
ProtClustDB:CLSN2689401 EvolutionaryTrace:Q9LZX1
Genevestigator:Q9LZX1 GermOnline:AT5G01750 Uniprot:Q9LZX1
Length = 217
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 67/164 (40%), Positives = 89/164 (54%)
Query: 2 AQQPSSGGAVANLVPVISPQYCCPHPIDLAIVRKVTVLSSGNIDVKDTND------VSPL 55
A P +GG V + P+YC P+PID+AIVRK+ L+ GN + D N P+
Sbjct: 18 APTPQAGGVV------VDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPV 71
Query: 56 --MEXXXXXXXXXXNRIVTLRLNTITQHNRWQVFRGESTERRHLIFSAKISSGWFSRTTK 113
+ +VTLR ++ H+RWQVFRG ST++R L+++ K SS TK
Sbjct: 72 FGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSS-MLQLKTK 130
Query: 114 LDVFLANNTRKDACDFRVVKSSSRLSEPPSCTIYAGESSTIVDQ 157
LDVFL +N + CDFRV S L SC +YAGES IV Q
Sbjct: 131 LDVFLGHNKDEKRCDFRV--KGSWLER--SCVVYAGESDAIVAQ 170
>TAIR|locus:2055250 [details] [associations]
symbol:LURP1 "AT2G14560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP] [GO:0050832
"defense response to fungus" evidence=RCA;IMP] [GO:0000165 "MAPK
cascade" evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0010310
"regulation of hydrogen peroxide metabolic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0043069 "negative regulation of programmed cell
death" evidence=RCA] [GO:0043900 "regulation of multi-organism
process" evidence=RCA] [GO:0045088 "regulation of innate immune
response" evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0050832 GO:GO:0009751 EMBL:AC006067 HOGENOM:HOG000242212
InterPro:IPR007612 InterPro:IPR025659 Pfam:PF04525 SUPFAM:SSF54518
EMBL:AY070390 EMBL:BT015680 EMBL:AK317043 IPI:IPI00542354
IPI:IPI00544053 PIR:F84518 RefSeq:NP_179062.1 RefSeq:NP_973456.1
UniGene:At.28628 ProteinModelPortal:Q9ZQR8 SMR:Q9ZQR8 STRING:Q9ZQR8
PRIDE:Q9ZQR8 EnsemblPlants:AT2G14560.1 GeneID:815943
KEGG:ath:AT2G14560 TAIR:At2g14560 eggNOG:euNOG08032
InParanoid:Q9ZQR8 PhylomeDB:Q9ZQR8 ProtClustDB:CLSN2679323
Genevestigator:Q9ZQR8 Uniprot:Q9ZQR8
Length = 207
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 55/147 (37%), Positives = 81/147 (55%)
Query: 17 VISPQYCCPHPIDLAIVRKVTVLSSGNIDVKDTNDV------SPLMEXXXXXXXXXXN-- 68
++ +YC P+P+ LAIVRKV ++ GN + + PL +
Sbjct: 7 IVGSKYCSPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSLHGKRILLDCSGA 66
Query: 69 RIVTLRLNTITQHNRWQVFRGESTERRHLIFSAKISSGWFSRTTKLDVFLANNTRKDACD 128
+++TLR +T H+RWQVFRG STE L+++ K SS KL+VFLANN + CD
Sbjct: 67 KVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSS-MIQLAPKLEVFLANNVEEKICD 125
Query: 129 FRVVKSSSRLSEPPSCTIYAGESSTIV 155
F+V + L + SC +YAG+S TI+
Sbjct: 126 FKV--KGAWLDD--SCVVYAGDSDTII 148
>TAIR|locus:2086062 [details] [associations]
symbol:AT3G16900 "AT3G16900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB026636
HOGENOM:HOG000242212 InterPro:IPR007612 InterPro:IPR025659
Pfam:PF04525 SUPFAM:SSF54518 IPI:IPI00524859 RefSeq:NP_188315.1
UniGene:At.53343 ProteinModelPortal:Q9LSQ1 SMR:Q9LSQ1 DNASU:820945
EnsemblPlants:AT3G16900.1 GeneID:820945 KEGG:ath:AT3G16900
TAIR:At3g16900 eggNOG:NOG307293 InParanoid:Q9LSQ1 OMA:KRACTIY
PhylomeDB:Q9LSQ1 ProtClustDB:CLSN2913458 Genevestigator:Q9LSQ1
Uniprot:Q9LSQ1
Length = 185
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 1 MAQQ-PSSGGAVANLVPVISPQYCCPHPIDLAIVRKVTVLSSGNIDVKDTNDVSPLMEXX 59
MA+Q P+S ++P++ ++ P P+DL I ++GN K +PL
Sbjct: 1 MAKQDPTSSNT---MLPLVGSEFVRPQPLDLTITGDTVKDATGN---KVFKVKTPLFGLH 54
Query: 60 XXXXXXXXNR--IVTLRLNTITQHNRWQVFRGESTERRHLIFSAKISSGWFSRTTKLDVF 117
N IVT+++ ++H+RWQV+RG + + IF+ K SS T+++VF
Sbjct: 55 NKRILVDPNDSPIVTMKMKVTSKHDRWQVYRGSDLDDK--IFTVKRSST-VQLKTRVEVF 111
Query: 118 LANN-TRKDACDFRVVKSSSRLSEPPSCTIYAGESSTIVDQ 157
L +N TR+ +CDF + R + +CTIY +S+ I+ Q
Sbjct: 112 LKHNQTRESSCDFTI---KGRFMKR-ACTIYVADSTKIIAQ 148
>TAIR|locus:2078506 [details] [associations]
symbol:AT3G56180 "AT3G56180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL163763
HOGENOM:HOG000242212 InterPro:IPR007612 InterPro:IPR025659
Pfam:PF04525 SUPFAM:SSF54518 EMBL:AK229670 IPI:IPI00527930
PIR:T47735 RefSeq:NP_191177.2 UniGene:At.34959
ProteinModelPortal:Q9LYM3 SMR:Q9LYM3 EnsemblPlants:AT3G56180.1
GeneID:824784 KEGG:ath:AT3G56180 TAIR:At3g56180 eggNOG:NOG329211
InParanoid:Q9LYM3 OMA:FLPENNN PhylomeDB:Q9LYM3
Genevestigator:Q9LYM3 Uniprot:Q9LYM3
Length = 204
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 15 VPVISPQYCCPHPIDLAIVRKVTVLSSGNIDVKDTNDVSPLMEXXXXXXXXXXNR----- 69
+ V+S Q+C P+P+DL + RKV S +V D + + L++ R
Sbjct: 16 ISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSG-NLLLQIDGQAWGFNRKRVMRDP 74
Query: 70 ----IVTLRLNTITQHNRWQVFRGESTERRHLIFSAKISSGWFSRTTKLDVFLA--NNTR 123
I+++R + N+W+V GES ER L+F+ + S S T +DVFL NN +
Sbjct: 75 AGFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQA-VSLKTSVDVFLPENNNVK 133
Query: 124 K-DACDFRVVKSSSRLS 139
K + CDF S +S
Sbjct: 134 KTNTCDFHASGGYSNIS 150
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 195 169 0.00082 108 3 11 22 0.36 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 585 (62 KB)
Total size of DFA: 149 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.98u 0.15s 13.13t Elapsed: 00:00:01
Total cpu time: 12.98u 0.15s 13.13t Elapsed: 00:00:01
Start: Sat May 11 02:41:03 2013 End: Sat May 11 02:41:04 2013