Query 047299
Match_columns 411
No_of_seqs 141 out of 822
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 17:00:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047299.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047299hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bm3a1 b.2.2.2 (A:5-166) Scaf 22.1 8.5 0.00062 32.5 -0.1 19 87-105 31-52 (162)
2 d2h8pc1 f.14.1.1 (C:22-78) Pot 18.8 13 0.00091 26.1 0.2 30 166-197 25-54 (57)
3 d1iray2 b.1.1.4 (Y:102-204) Ty 15.7 34 0.0025 25.3 2.2 26 277-302 57-82 (103)
4 d1zv9a1 b.2.2.2 (A:3-173) Cell 14.8 16 0.0011 31.0 -0.1 14 92-105 39-52 (171)
5 d1tyja1 b.2.2.2 (A:2-171) Cell 14.6 18 0.0013 30.5 0.2 14 92-105 37-50 (170)
6 d1f2qa2 b.1.1.4 (A:86-174) IgE 13.3 41 0.003 23.8 2.0 30 275-304 46-75 (89)
7 d1f97a1 b.1.1.1 (A:27-128) Jun 12.0 41 0.003 23.8 1.6 24 280-303 67-90 (102)
8 d1x44a1 b.1.1.4 (A:8-97) Myosi 11.9 94 0.0069 21.5 3.6 19 279-297 58-76 (90)
9 d2c9aa1 b.1.1.4 (A:184-279) Re 11.8 46 0.0033 23.4 1.8 20 280-299 62-81 (96)
10 d1cs6a3 b.1.1.4 (A:209-299) Ax 11.5 56 0.0041 22.8 2.2 26 274-299 51-76 (91)
No 1
>d2bm3a1 b.2.2.2 (A:5-166) Scaffolding dockerin binding protein A, SdbA {Clostridium thermocellum [TaxId: 1515]}
Probab=22.10 E-value=8.5 Score=32.47 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=15.4
Q ss_pred Hhhhh---hccCcceeeecChH
Q 047299 87 AVGGI---KKATSTITNAINPW 105 (411)
Q Consensus 87 ~i~~~---i~~~p~vl~A~~P~ 105 (411)
-++|. |++||.||+|+||.
T Consensus 31 nfAGyQ~NIKYDP~vLQ~Vn~~ 52 (162)
T d2bm3a1 31 NFAGFQVNIVYDPKVLMAVDPE 52 (162)
T ss_dssp TEEEEEEEEECCTTTEEEECTT
T ss_pred ccceeEEeeeeCHHHhcccccC
Confidence 34555 99999999999985
No 2
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=18.83 E-value=13 Score=26.11 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=20.1
Q ss_pred ccccccCcccccccccccccCchhHHHHHHHH
Q 047299 166 ASVLVKHPEYASDALYKYVLDPLYWSMVVMAI 197 (411)
Q Consensus 166 ~A~ll~~p~~~~n~f~~~~P~~~~~p~~vlAt 197 (411)
+.|+..+.. +|.-|.++|+.++|-++-+.|
T Consensus 25 ~~y~~E~~~--~~~~f~sip~a~WWaivT~TT 54 (57)
T d2h8pc1 25 LAVLAERGA--PGAQLITYPRALWWACETATT 54 (57)
T ss_dssp HHHHHHTTS--TTCCCCSHHHHHHHHHHHHTT
T ss_pred HHHHHhcCC--CCccccccchhhhhheeeeec
Confidence 334454433 344599999999999886654
No 3
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.66 E-value=34 Score=25.34 Aligned_cols=26 Identities=27% Similarity=0.645 Sum_probs=22.0
Q ss_pred CCeEEEEEecCCCCCEEEEEEEEeec
Q 047299 277 EERFIFCKLEPKKINMYRCVTRYGYM 302 (411)
Q Consensus 277 ~eRf~v~rlg~k~~g~yRvv~RYGYm 302 (411)
+..+.+..+...+.|.|+|.+++.+.
T Consensus 57 ~~~L~I~~v~~~D~G~Y~C~a~n~~~ 82 (103)
T d1iray2 57 KDRLIVMNVAEKHRGNYTCHASYTYL 82 (103)
T ss_dssp TTEEEESSCCGGGCEEEEEEEEEEET
T ss_pred CCEEEEcccccccCcEEEEEEEECcC
Confidence 45688888888889999999998764
No 4
>d1zv9a1 b.2.2.2 (A:3-173) Cellulosomal scaffoldin adaptor protein B, ScaB {Acetivibrio cellulolyticus [TaxId: 35830]}
Probab=14.81 E-value=16 Score=30.96 Aligned_cols=14 Identities=7% Similarity=0.100 Sum_probs=11.8
Q ss_pred hccCcceeeecChH
Q 047299 92 KKATSTITNAINPW 105 (411)
Q Consensus 92 i~~~p~vl~A~~P~ 105 (411)
|++||+||+|++|.
T Consensus 39 IKYDP~vLQ~V~~t 52 (171)
T d1zv9a1 39 MKYDPAVLQPVTSS 52 (171)
T ss_dssp EECCTTTEEEECTT
T ss_pred eeeChHHeeccCCC
Confidence 88888888888873
No 5
>d1tyja1 b.2.2.2 (A:2-171) Cellulosomal scaffoldin ScaA {Bacteroides cellulosolvens [TaxId: 35825]}
Probab=14.61 E-value=18 Score=30.54 Aligned_cols=14 Identities=14% Similarity=0.029 Sum_probs=12.2
Q ss_pred hccCcceeeecChH
Q 047299 92 KKATSTITNAINPW 105 (411)
Q Consensus 92 i~~~p~vl~A~~P~ 105 (411)
|++||+||+|+||.
T Consensus 37 IKYDP~vLQ~V~p~ 50 (170)
T d1tyja1 37 IKYNTTYLQPWDTI 50 (170)
T ss_dssp EECCTTTEEEEETT
T ss_pred eeeChHHeecccCC
Confidence 88999999998885
No 6
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.29 E-value=41 Score=23.79 Aligned_cols=30 Identities=10% Similarity=0.145 Sum_probs=23.8
Q ss_pred CCCCeEEEEEecCCCCCEEEEEEEEeecCC
Q 047299 275 QLEERFIFCKLEPKKINMYRCVTRYGYMDV 304 (411)
Q Consensus 275 p~~eRf~v~rlg~k~~g~yRvv~RYGYmD~ 304 (411)
.....+.+..+...+.|.|+|.++.++.+.
T Consensus 46 ~~~~~l~i~~~~~~dsG~Y~C~a~n~~~~~ 75 (89)
T d1f2qa2 46 YENHNISITNATVEDSGTYYCTGKVWQLDY 75 (89)
T ss_dssp CCSSEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred cccceEEEeeeeeecCcEEEEEEEeCCCCe
Confidence 345678888888888899999999886543
No 7
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=12.04 E-value=41 Score=23.83 Aligned_cols=24 Identities=17% Similarity=0.253 Sum_probs=18.9
Q ss_pred EEEEEecCCCCCEEEEEEEEeecC
Q 047299 280 FIFCKLEPKKINMYRCVTRYGYMD 303 (411)
Q Consensus 280 f~v~rlg~k~~g~yRvv~RYGYmD 303 (411)
+.+.++...|.|.|+|.++-.+..
T Consensus 67 L~I~~v~~~D~G~Y~C~a~n~~g~ 90 (102)
T d1f97a1 67 ITFSSVTRKDNGEYTCMVSEEGGQ 90 (102)
T ss_dssp EEESCCCGGGCEEEEEEEEETTSS
T ss_pred EEEeECCccCCEEEEEEEEECCCC
Confidence 567777788889999999876544
No 8
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.86 E-value=94 Score=21.49 Aligned_cols=19 Identities=16% Similarity=0.130 Sum_probs=16.7
Q ss_pred eEEEEEecCCCCCEEEEEE
Q 047299 279 RFIFCKLEPKKINMYRCVT 297 (411)
Q Consensus 279 Rf~v~rlg~k~~g~yRvv~ 297 (411)
++.+..+...+.|.|+|++
T Consensus 58 ~L~I~~v~~~D~G~Y~C~a 76 (90)
T d1x44a1 58 ILIIEGATKADAAEYSVMT 76 (90)
T ss_dssp EEEEEEECTTTCSEEEEEE
T ss_pred EEEECccccccCEEEEEEE
Confidence 5788889889999999987
No 9
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.79 E-value=46 Score=23.37 Aligned_cols=20 Identities=25% Similarity=0.539 Sum_probs=16.4
Q ss_pred EEEEEecCCCCCEEEEEEEE
Q 047299 280 FIFCKLEPKKINMYRCVTRY 299 (411)
Q Consensus 280 f~v~rlg~k~~g~yRvv~RY 299 (411)
+.+..+...+.|.|+|++.=
T Consensus 62 L~I~~v~~~D~G~Y~C~a~N 81 (96)
T d2c9aa1 62 FNVVNTTKRDAGKYRCMIRT 81 (96)
T ss_dssp EEECSCCGGGCSEEEEEEEE
T ss_pred EEECCCCHHHCeEEEEEEEe
Confidence 66777777888999999974
No 10
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=11.54 E-value=56 Score=22.80 Aligned_cols=26 Identities=12% Similarity=0.231 Sum_probs=20.8
Q ss_pred cCCCCeEEEEEecCCCCCEEEEEEEE
Q 047299 274 IQLEERFIFCKLEPKKINMYRCVTRY 299 (411)
Q Consensus 274 Vp~~eRf~v~rlg~k~~g~yRvv~RY 299 (411)
+..+..+.+..+...+.|.|+|++.=
T Consensus 51 ~~~~~~L~I~~v~~~D~G~Y~C~a~N 76 (91)
T d1cs6a3 51 LSSEPLLHIQNVDFEDEGTYECEAEN 76 (91)
T ss_dssp SBSSSEEEECSCCGGGCEEEEEEEEE
T ss_pred eeeeeEEEeCCCCccCCEEEEEEEEE
Confidence 34455688888988889999999983
Done!