BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047305
(767 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/739 (58%), Positives = 555/739 (75%), Gaps = 13/739 (1%)
Query: 7 EVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN 66
EV++IL PIEPALEPL+PFLSK +TSVI N Q+GFRFFIWA++R+RLRS S
Sbjct: 36 EVISILAKKKPIEPALEPLVPFLSKNIITSVIKDEVNRQLGFRFFIWASRRERLRSRESF 95
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
VI ML + NG DLYWQTL+EL+SG VSV S F VLIS Y K+G EKA+ESFG+MKE
Sbjct: 96 GLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKE 155
Query: 127 FDCQPDVYIYNAVLNIAFRKQLF-LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
FDC+PDV+ YN +L + R+++F +LA AVY EM+K NC PN+ TF +L++GL K G+T
Sbjct: 156 FDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTS 215
Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
A KM D+MT RGI PN+ TYTI+ISGLCQ AD+A +LF +M+ SG PD VA+NALL
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
+GFCKL R+ EA LLR FEKDGFV L YS LIDGLFRA+RY +A+ Y M ++ I+
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335
Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
PD++LY ++I+GLS+AGK++DA+KLLS M +GI PDTYCYNA+IK C GLL++ RSL
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395
Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
Q+E+ + +S P+ T TILIC MCRNG+V +A+++F ++EK+GC PSV FNALIDGLCK
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455
Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
+GEL++A LL +KME+G+ +LFLRLS GNR S TMVE +G I KAY+ L
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLSHSGNR-----SFDTMVE----SGSILKAYRDLA 506
Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
A++G+ PDI++YN LINGFC+ G+I+GALKL LQLKGL PDSVTY TLINGL RV
Sbjct: 507 HFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566
Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
REE+AF++F ++ SPAVY+SLMTWSCR+RK +AF+LW++YL+ IS DDE+
Sbjct: 567 REEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETAN 624
Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
IE+ ++GE E A++ L+E+D + ++ L PYTIWLIGLCQ G+ EAL +FSVL E K
Sbjct: 625 EIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKK 684
Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
+VTPPSCVKLIHGLCKR LD A++VFLYTL N F L PRVCNYLL SLL S + ++
Sbjct: 685 ILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIV 744
Query: 726 AYHLLCRMKSVGYDLDACL 744
+ L RM+ GY++D+ L
Sbjct: 745 S-QLTNRMERAGYNVDSML 762
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 255/488 (52%), Gaps = 13/488 (2%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
F L+S K+ E + +M+ D+Y Y+ +N R+ LALAV +M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
KL P+IVT S L+NG S + A+ ++D+M + G P+ FT+T +I GL N+A
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
EA L +M GC PD V Y ++NG CK +D AL+LL+ EK + Y+ +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
DGL + K D+A + +M + I PDV Y +I L G+ DA +LLSDM ER I
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
P+ ++ALI F G L +A L E+ KR P+ T++ LI G C + +D+A+ +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
F M CFP+V ++ LI G CKA +E+ ME LF +SQ G V +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEG------ME------LFREMSQRG-LVGN 432
Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
+ T++ + A A + Q+ G P+I+TYN L++G CK G + A+ +F+
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
LQ + PD TY +I G+ + + ED + +F + G +P+ Y ++++ CR+
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 581 KFSLAFSL 588
A SL
Sbjct: 553 SKEEADSL 560
Score = 259 bits (662), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 263/525 (50%), Gaps = 15/525 (2%)
Query: 55 AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
K + S + ++S + K N F+L +++++ +S + + I+ + +
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
AL KM + +PD+ +++LN + A+A+ +MV++ P+ TF+ L
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
I+GL K A+ ++D+M QRG P+ TY V++GLC+ D A L KM+
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
D V YN +++G CK + +D+AL L + G P + +YS LI L R+ +A
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
M E KI P+VV + +I + GK+ +A KL +M +R I PD + Y++LI GFC
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
LD+A+ + + +D PN T++ LI G C+ V++ +LF +M + G +
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
+ LI G +A + + A ++F +M +G +P + + +++ C
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL--------------TYNILLDGLCK 480
Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
G + KA + L S PDI TYN +I G CK G + +LF L LKG+ P+ +
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
Y T+I+G R +E+A + +M ++G P+ Y +L+ R
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Score = 239 bits (609), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 162/595 (27%), Positives = 291/595 (48%), Gaps = 57/595 (9%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+ ++ +MVK P+IV F+ L++ ++K K E+ I + ++M GI + +TY+I I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ ++ A + KM G PD V ++LLNG+C +R+ +A+AL+ + G+ P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+++ LI GLF + EA A +M + +PD+V YG ++ GL + G + A+ LL
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
M + I D YN +I G C +D A +L E+ + P+ T++ LI +C
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
G DA +L + M + P+V F+ALID K G+L +A L+ +M + +P +F
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-- 364
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
+ +++ +C + +A + + P+++TY++LI GFCK
Sbjct: 365 ------------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
+ ++LF+E+ +GL ++VTY TLI+G + ++A +F QM G P+ Y
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
L+ C+ K + A ++ E+LQ+ +E I
Sbjct: 473 ILLDGLCKNGKLAKAMVVF-------------------EYLQRSTMEPDIY--------- 504
Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLD 687
Y I + G+C+ G+V++ +F L K + P+ + +I G C++G +
Sbjct: 505 ------TYNIMIEGMCKAGKVEDGWELFCNL-SLKGV--SPNVIAYNTMISGFCRKGSKE 555
Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
A + ++G + N L+R+ L +D + + L+ M+S G+ DA
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARL--RDGDREASAELIKEMRSCGFAGDA 608
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 192/372 (51%)
Query: 68 AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
V++ L K DL L ++ G + ++ +I G K + AL F +M
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
+PDV+ Y+++++ + A + +M++ PN+VTFS LI+ K GK A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
K+ DEM +R I P+ FTY+ +I+G C +R DEA +F M C P+ V Y+ L+ G
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
FCK +RV+E + L R + G V +Y+ LI G F+A+ D A +++M + P+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
++ Y +++ GL + GK+ AM + ++ + PD Y YN +I+G C G ++ L
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
+ + PN + +I G CR G ++A L KM++ G P+ G +N LI + G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 428 ELEKANLLFYKM 439
+ E + L +M
Sbjct: 588 DREASAELIKEM 599
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/534 (26%), Positives = 230/534 (43%), Gaps = 51/534 (9%)
Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
L I + D+A LF M S P V +N LL+ K+ + + ++L + G
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
L +YS I+ R + A A KM + EPD+V ++ G + ++ DA+ L+
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
M E G PDT+ + LI G +A +L ++ +R P+ T+ ++ G+C+ G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRL 451
+D A L KMEK V ++N +IDGLCK ++ A LF +M+ G P +F
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF--- 294
Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
+ +++ C G A ++L + E P+++T+++LI+ F K G
Sbjct: 295 -----------TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
+ A KL+ E+ + + PD TY +LING DR ++A +F M C P+ Y +
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
L+ C+ + R +E M+ E Q+G V N +
Sbjct: 404 LIKGFCKAK------------------RVEEGMELFREMSQRGLVGNTVT---------- 435
Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
YT + G Q A +F +V + L+ GLCK G L AM
Sbjct: 436 ------YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
VF Y ++ + P + Y + K K + L C + G + Y
Sbjct: 490 VFEYLQRS--TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/479 (33%), Positives = 251/479 (52%), Gaps = 13/479 (2%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
F L+S K+ + + +M+ ++Y Y+ ++N R+ LALAV +M+
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
KL P+IVT + L+NG + A+ ++ +M + G P+ FT+ +I GL + NRA
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
EA L +M GC PD V Y ++NG CK +D AL+LL+ E+ P + Y+ +I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
D L K ++A + +M + I P+VV Y +IR L G+ DA +LLSDM ER I
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
P+ ++ALI F G L +A L E+ KR P+ T++ LI G C + +D+A+ +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
F M CFP+V +N LI G CKA +++ ME LF +SQ G V +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEG------ME------LFREMSQRG-LVGN 430
Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
+ T++ + A A + Q+ G LPDI+TY+ L++G C G + AL +F+
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
LQ + PD TY +I G+ + + ED + +F + G P+ Y ++M+ CR+
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Score = 256 bits (653), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 259/524 (49%), Gaps = 13/524 (2%)
Query: 55 AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
K + S S ++S + K N FDL +++++ +S + +LI+ + +
Sbjct: 73 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL 132
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
AL KM + +PD+ N++LN A+++ +MV++ P+ TF+ L
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
I+GL + + A+ ++D M +G P+ TY IV++GLC+ D A L KM+
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
P V YN +++ C + V++AL L + G P + +Y+ LI L R+ +A
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
M E KI P+VV + +I + GK+ +A KL +M +R I PD + Y++LI GFC
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
LD+A+ + + +D PN T+ LI G C+ VD+ +LF +M + G +
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
+ LI G +A E + A ++F +M +S G + D + +++ C
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQM-----------VSDG--VLPDIMTYSILLDGLCNN 479
Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
G + A + L S PDI TYN +I G CK G + LF L LKG++P+ VTY
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
T+++G R +E+A +F +M + G P Y +L+ R
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 246 bits (627), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 164/592 (27%), Positives = 288/592 (48%), Gaps = 51/592 (8%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+ ++ +MVK P+IV FS L++ ++K K ++ I + ++M GI N +TY+I+I+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ ++ A + KM G PD V N+LLNGFC R+ +A++L+ + G+ P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+++ LI GLFR R EA A +M + +PD+V YG+++ GL + G + A+ LL
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
M + I P YN +I C+ ++ A +L E+ + PN T+ LI +C
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
G DA +L + M + P+V F+ALID K G+L +A L+ +M + +P +F
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-- 362
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
+ +++ +C + +A + + P+++TYN+LI GFCK
Sbjct: 363 ------------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
++ ++LF+E+ +GL ++VTY TLI+G + ++A +F QM +G P Y
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
L+ C K A ++ E+LQ+ ++E I
Sbjct: 471 ILLDGLCNNGKVETALVVF-------------------EYLQRSKMEPDIY--------- 502
Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
Y I + G+C+ G+V++ ++F L + ++ G C++G + A
Sbjct: 503 ------TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
+F + G + N L+R+ L +D K + L+ M+S + DA
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHL--RDGDKAASAELIREMRSCRFVGDA 606
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 233/481 (48%), Gaps = 52/481 (10%)
Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
L++G+ A+ G+M E QPD + +N +++ FR A+A+ MV
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
C P++VT+ +++NGL K G ++A+ +L +M Q I P Y +I LC ++A
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL-------------------ALLRSF 264
LF +M + G P+ V YN+L+ C R +A AL+ +F
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 265 EKDGFV----------------PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
K+G + P + +YS LI+G R DEA + M + P+V
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
V Y +I+G +A +V + M+L +M +RG+V +T Y LI GF D A+ + +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
+ LP+ T++IL+ G+C NG V+ A +F ++++ P + +N +I+G+CKAG+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 429 LEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
+E LF + + G P + + TM+ +C GL +A + ++
Sbjct: 517 VEDGWDLFCSLSLKGVKPNV--------------VTYTTMMSGFCRKGLKEEADALFREM 562
Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ--RVD 545
E G LPD TYN+LI + G+ + +L +E++ D+ T G + N L R+D
Sbjct: 563 KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLD 622
Query: 546 R 546
+
Sbjct: 623 K 623
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 191/371 (51%)
Query: 69 VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
V++ L K DL L ++ G + ++ +I + AL F +M
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
+P+V YN+++ + A + +M++ PN+VTFS LI+ K GK A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
K+ DEM +R I P+ FTY+ +I+G C +R DEA +F M C P+ V YN L+ GF
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
CK +RVDE + L R + G V +Y+ LI G F+A+ D A +++M + + PD+
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
+ Y +++ GL GKV+ A+ + ++ + PD Y YN +I+G C G ++ L
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
+ + PN T+T ++ G CR G+ ++A LF +M++ G P G +N LI + G+
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 429 LEKANLLFYKM 439
+ L +M
Sbjct: 587 KAASAELIREM 597
Score = 38.1 bits (87), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ ++I G K G E + F + +P+V Y +++ RK L A A++ EM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
+ LP+ T++ LI + G + +++ EM + + T +V + + R
Sbjct: 563 KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV-TNMLHDGRL 621
Query: 220 DEAYRLFLKM 229
D++ FLKM
Sbjct: 622 DKS---FLKM 628
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 268 bits (686), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 251/500 (50%), Gaps = 22/500 (4%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
F L+S K+ + + +M+ + Y Y+ ++N R+ LALAV +M+
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
KL PNIVT S L+NG S + A+ ++D+M G PN T+ +I GL N+A
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
EA L +M GC PD V Y ++NG CK D A LL E+ P + Y+ +I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
DGL + K D+A +++M + I P+VV Y +I L G+ DA +LLSDM ER I
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
PD + ++ALI F G L +A L E+ KR P+ T++ LI G C + +D+A+++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----IGKNPT---LFLRLSQ 453
F M CFP V +N LI G CK +E+ +F +M +G T L L Q
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 454 GGN----------RVHDKA-----SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
G+ V D + T+++ C G + KA + L S P I T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
YN +I G CK G + LF L LKG++PD V Y T+I+G R +E+A +F +M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 559 QNGCTPSPAVYKSLMTWSCR 578
++G P+ Y +L+ R
Sbjct: 564 EDGTLPNSGCYNTLIRARLR 583
Score = 249 bits (637), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 168/595 (28%), Positives = 293/595 (49%), Gaps = 57/595 (9%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+A++ EMVK P+I+ FS L++ ++K K +V I + ++M GI N +TY+I+I+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ ++ A + KM G P+ V ++LLNG+C +R+ EA+AL+ G+ P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+++ LI GLF + EA A +M + +PD+V YGV++ GL + G A LL
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
+ M + + P YN +I G C +D A +L E+ + PN T++ LI +C
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
G DA +L + M + P V F+ALID K G+L +A L+ +M + +P++
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI--- 361
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
+ +++ +C + +A ++ + PD++TYN+LI GFCK
Sbjct: 362 -----------VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
+ +++F+E+ +GL ++VTY LI GL + + A IF +M +G P+ Y
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
+L+ C+ K A ++ E+LQ+ ++E I
Sbjct: 471 TLLDGLCKNGKLEKAMVVF-------------------EYLQRSKMEPTIY--------- 502
Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLD 687
Y I + G+C+ G+V++ ++F L K + P V +I G C++G +
Sbjct: 503 ------TYNIMIEGMCKAGKVEDGWDLFCNL-SLKGV--KPDVVAYNTMISGFCRKGSKE 553
Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
A +F ++G + N L+R+ L +D + + L+ M+S G+ DA
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARL--RDGDREASAELIKEMRSCGFAGDA 606
Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 157/551 (28%), Positives = 258/551 (46%), Gaps = 61/551 (11%)
Query: 56 KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
K + S S ++S + K N FD+ +++++ + + +LI+ + +
Sbjct: 74 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133
Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
AL GKM + +P++ +++LN + A+A+ +M PN VTF+ LI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
+GL K A+ ++D M +G P+ TY +V++GLC+ D A+ L KM+
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
P + YN +++G CK + +D+AL L + E G P + +YS LI L R+ +A
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI---------------- 339
M E KI PDV + +I + GK+ +A KL +M +R I
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 340 -------------------VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
PD YN LIKGFC +++ + E+ +R + NT T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
+ ILI G+ + G D AQ++F +M G P++ +N L+DGLCK G+LEKA ++F ++
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 441 IGK-NPT----------------------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
K PT LF LS G + D + TM+ +C G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK-PDVVAYNTMISGFCRKGSK 552
Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
+A + ++ E G LP+ YN+LI + G+ + +L KE++ G D+ T G +
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Query: 538 INGLQ--RVDR 546
N L R+D+
Sbjct: 613 TNMLHDGRLDK 623
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 1/368 (0%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+ +I L K D E+ + + + LIS G A M E
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
PDV+ ++A+++ ++ + A +Y EMVK + P+IVT+S LING + +
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A +M + M + P+ TY +I G C+ R +E +F +M G + V YN L+
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
G + D A + + DG P + +Y+ L+DGL + + ++A + + K+EP
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
+ Y +MI G+ +AGKV+D L ++ +G+ PD YN +I GFC G ++A +L
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
E+ + +LPN+ + LI R+G + + +L +M G F L+ +
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FAGDASTIGLVTNMLHD 618
Query: 427 GELEKANL 434
G L+K+ L
Sbjct: 619 GRLDKSFL 626
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 40/256 (15%)
Query: 40 KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
K K + G F ++R + + + + +I L + D+ + E+ S V
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ L+ G K G EKA+ F ++ +P +Y YN
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN---------------------- 505
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
++I G+ K+GK E + ++ +G+ P+ Y +ISG C+
Sbjct: 506 -------------IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD-EALA-LLRSFEKDGFVPRLGSYS 277
+EA LF +MK+ G P+ YN L+ +LR D EA A L++ GF +
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRA--RLRDGDREASAELIKEMRSCGFAGDASTIG 610
Query: 278 CLIDGLFRAKRYDEAY 293
L+ + R D+++
Sbjct: 611 -LVTNMLHDGRLDKSF 625
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 247/498 (49%), Gaps = 35/498 (7%)
Query: 116 KALESFGKMKEFD-------------CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
K L + KMK+FD ++Y YN ++N R+ ALA+ +M+KL
Sbjct: 70 KLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL 129
Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
P+IVT + L+NG + A+ ++D+M + G P+ T+T ++ GL Q N+A EA
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
L +M GC PD V Y A++NG CK D AL LL EK + YS +ID
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
L + + D+A + +M + I PDV Y +I L G+ DA +LLSDM ER I P+
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
+N+LI F G L +A L E+ +R PN T+ LI G C + +D+AQ++F
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----IGKNPTL------FLRLS 452
M C P V +N LI+G CKA ++ LF M +G T F + S
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 453 QGGNR-----------VH-DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
N VH + + T+++ C G + KA + L +S PDI TYN
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
+ G CK G + LF L LKG++PD + Y T+I+G + +E+A+ +F +M ++
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 561 GCTPSPAVYKSLMTWSCR 578
G P Y +L+ R
Sbjct: 550 GPLPDSGTYNTLIRAHLR 567
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 178/619 (28%), Positives = 305/619 (49%), Gaps = 60/619 (9%)
Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
NA+L++ + A+ ++ EMVK P+IV FS L++ ++K K ++ I ++M
Sbjct: 39 NALLHLKLDE-----AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI 93
Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
G+ N +TY I+I+ LC+ ++ A + KM G P V N+LLNGFC R+ E
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
A+AL+ + G+ P +++ L+ GLF+ + EA A +M + +PD+V YG +I
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
GL + G+ A+ LL+ M + I D Y+ +I C +D A +L E+ + P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
+ T++ LI +C G DA +L + M + P+V FN+LID K G+L +A LF
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
+M ++ S N V + +++ +C + +A +I + LPD+
Sbjct: 334 DEM---------IQRSIDPNIV----TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
+TYN+LINGFCK + ++LF+++ +GL ++VTY TLI+G + ++A +F Q
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
M +G P+ Y +L+ C+ K A ++ E+LQK ++
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-------------------EYLQKSKM 481
Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV-- 674
E I Y I G+C+ G+V++ ++F L K + P +
Sbjct: 482 EPDIY---------------TYNIMSEGMCKAGKVEDGWDLFCSL-SLKGV--KPDVIAY 523
Query: 675 -KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
+I G CK+G + A +F+ ++G + N L+R+ L +D K + L+ M
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL--RDGDKAASAELIKEM 581
Query: 734 KSVGYDLDACLYPKTKSLL 752
+S + DA Y +L
Sbjct: 582 RSCRFAGDASTYGLVTDML 600
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 193/372 (51%)
Query: 68 AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
AVI+ L K DL L+++ G + ++ +I K + AL F +M
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
+PDV+ Y+++++ + A + +M++ PN+VTF+ LI+ +K GK A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
K+ DEM QR I PN TY +I+G C +R DEA ++F M C PD V YN L+NG
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
FCK ++V + + L R + G V +Y+ LI G F+A D A +++M + + P+
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
++ Y ++ GL + GK++ AM + +++ + PD Y YN + +G C G ++ L
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
+ + P+ + +I G C+ G+ ++A LF KM++ G P G +N LI + G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 428 ELEKANLLFYKM 439
+ + L +M
Sbjct: 570 DKAASAELIKEM 581
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 179/370 (48%), Gaps = 8/370 (2%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKM 124
S VI L K D E+ N + DVF LIS G A M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEM--DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
E P+V +N++++ ++ + A ++ EM++ + PNIVT++ LING +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
+ A ++ M + LP+ TY +I+G C+ + + LF M G + V Y L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
++GF + D A + + DG P + +Y+ L+DGL + + ++A + + + K+
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
EPD+ Y +M G+ +AGKV+D L + +G+ PD YN +I GFC GL ++A +
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK---AGCFPSVGMFNALI- 420
L +++ + LP++ T+ LI R+G + +L +M AG + G+ ++
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 601
Query: 421 DGLCKAGELE 430
DG G LE
Sbjct: 602 DGRLDKGFLE 611
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 177/415 (42%), Gaps = 29/415 (6%)
Query: 303 KIEPDVVLYGVMIRGLSEAG-------------KVKDAMKLLSDMRERGIVPDTYCYNAL 349
K P L G+ GLS G K+ +A+ L +M + P ++ L
Sbjct: 12 KASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKL 71
Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
+ + D S ++ N +T+ I+I +CR + A + KM K G
Sbjct: 72 LSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGY 131
Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
PS+ N+L++G C + +A L +M E+G P D + T+V
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP--------------DTVTFTTLV 177
Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
+A ++ ++ G PD++TY ++ING CK G + AL L +++ +
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
D V Y T+I+ L + +DA +F +M G P Y SL++ C ++S A L
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 589 WLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
L R I+ I+ F ++G++ A + EM + D + Y + G C
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
++ EA IF+++V + + LI+G CK + M++F + G +
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 40/267 (14%)
Query: 29 LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
++ T+ + K K G F ++R + + + + +I + + D +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 89 LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
+ S V + L+ G K G EKA+ F +++ +PD+Y YN
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN----------- 489
Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
++ G+ K+GK E + ++ +G+ P+ Y
Sbjct: 490 ------------------------IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEK 266
+ISG C+ +EAY LF+KMK+ G PD YN L+ LR D+A + L++
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA--HLRDGDKAASAELIKEMRS 583
Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAY 293
F +Y + D + R D+ +
Sbjct: 584 CRFAGDASTYGLVTD-MLHDGRLDKGF 609
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 249/479 (51%), Gaps = 13/479 (2%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
F L+S K+ + + +M+ D+Y YN ++N R+ LALAV +M+
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
KL P+IVT S L+NG + A+ ++D+M PN T+ +I GL N+A
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
EA L +M GC PD Y ++NG CK +D AL+LL+ EK + Y+ +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
D L K ++A + +M + I P+VV Y +IR L G+ DA +LLSDM ER I
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
P+ ++ALI F G L +A L E+ KR P+ T++ LI G C + +D+A+ +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
F M CFP+V +N LI G CKA +E+ ME LF +SQ G V +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEG------ME------LFREMSQRG-LVGN 429
Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
+ T+++ AG A KI ++ G PDIITY+ L++G CK G + AL +F+
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
LQ + PD TY +I G+ + + ED + +F + G P+ +Y ++++ CR+
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 261/529 (49%), Gaps = 13/529 (2%)
Query: 50 FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
F + + L S + ++S + K N FDL + +++ +S + +LI+ +
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
+ AL GKM + +PD+ +++LN + A+A+ +M + PN V
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
TF+ LI+GL K A+ ++D M RG P+ FTY V++GLC+ D A L KM
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
+ D V Y +++ C + V++AL L + G P + +Y+ LI L R+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
+A M E KI P+VV + +I + GK+ +A KL +M +R I PD + Y++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
I GFC LD+A+ + + +D PN T+ LI G C+ V++ +LF +M + G
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
+ +N LI GL +AG+ + A +F KM P D + +++
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-------------DIITYSILLD 473
Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
C G + KA + L +S PDI TYN +I G CK G + LF L LKG++P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
+ + Y T+I+G R +E+A +F +M ++G P+ Y +L+ R
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 203/397 (51%), Gaps = 8/397 (2%)
Query: 68 AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
V++ L K DL L ++ G + ++ +I + AL F +M
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
+P+V YN+++ + A + +M++ PN+VTFS LI+ K GK A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
K+ DEM +R I P+ FTY+ +I+G C +R DEA +F M C P+ V YN L+ G
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
FCK +RV+E + L R + G V +Y+ LI GLF+A D A ++KM + + PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
++ Y +++ GL + GK++ A+ + +++ + PD Y YN +I+G C G ++ L
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
+ + PN +T +I G CR G+ ++A LF +M++ G P+ G +N LI + G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Query: 428 ELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHD 460
+ + L +M +G T+ + + N +HD
Sbjct: 585 DKAASAELIKEMRSCGFVGDASTISMVI----NMLHD 617
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/585 (26%), Positives = 271/585 (46%), Gaps = 64/585 (10%)
Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
K + A+ + EM Q LP+ + ++S + ++N+ D L +M++ S D +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
L+N FC+ ++ ALA+L K G+ P + + S L++G KR EA A +MF
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
+ +P+ V + +I GL K +A+ L+ M RG PD + Y ++ G C G +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
SL ++ K + +T +I +C V+DA LF +M+ G P+V +N+LI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 423 LCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG---------GNRVHDKA-------- 462
LC G A+ L M +I N F L +++D+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 463 --SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
+ +++ +C + +A + + P+++TYN+LI GFCK + ++LF+
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
E+ +GL ++VTY TLI GL + + A +IF +M +G P Y L+ C+
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
K A ++ E+LQK ++E I Y I
Sbjct: 480 KLEKALVVF-------------------EYLQKSKMEPDIY---------------TYNI 505
Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL 697
+ G+C+ G+V++ ++F L K + P+ + +I G C++G + A +F
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSL-SLKGV--KPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
++G + N L+R+ L +D K + L+ M+S G+ DA
Sbjct: 563 EDGTLPNSGTYNTLIRARL--RDGDKAASAELIKEMRSCGFVGDA 605
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 40/256 (15%)
Query: 40 KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
K K + G F ++R + + + + +I L + D+ + ++ S V
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ +L+ G K G EKAL F +++ +PD+Y YN
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN---------------------- 504
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
++I G+ K+GK E + ++ +G+ PN YT +ISG C+
Sbjct: 505 -------------IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
+EA LF +MK+ G P+ YN L+ +LR D+A + L++ GFV + S
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRA--RLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Query: 278 CLIDGLFRAKRYDEAY 293
+I+ + R +++Y
Sbjct: 610 MVIN-MLHDGRLEKSY 624
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/605 (26%), Positives = 291/605 (48%), Gaps = 35/605 (5%)
Query: 97 VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-KQLFLLALAV 155
S VF +++ Y ++ +KAL + P V YNAVL+ R K+ A V
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
+ EM++ PN+ T+++LI G +G +VA+ + D+M +G LPN TY +I G C+
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
+ + D+ ++L M G P+ ++YN ++NG C+ R+ E +L + G+ +
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
Y+ LI G + + +A + +M + P V+ Y +I + +AG + AM+ L MR
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
RG+ P+ Y L+ GF G +++A + E+ P+ T+ LI G C G ++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
DA + M++ G P V ++ ++ G C++ ++++A + +M E G P
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP--------- 483
Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
D + ++++ +C +A + ++ G PD TY +LIN +C G++
Sbjct: 484 -----DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
AL+L E+ KG+ PD VTY LINGL + R +A R+ ++ PS Y +L+
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
+C +F SL I+ F KG + A Q M K +
Sbjct: 599 -NCSNIEFKSVVSL------------------IKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
Y I + G C+ G +++A ++ +V+ ++ + + L+ L K G ++ V +
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 695 YTLKN 699
+ L++
Sbjct: 700 HVLRS 704
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 143/573 (24%), Positives = 270/573 (47%), Gaps = 38/573 (6%)
Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE-A 222
C F L++ S+ + A+ ++ G +P +Y V+ + R A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
+F +M +S SP+ YN L+ GFC +D AL L E G +P + +Y+ LIDG
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
+ ++ D+ + R M + +EP+++ Y V+I GL G++K+ +L++M RG D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
YN LIKG+C G QA + E+ + P+ T+T LI MC+ G ++ A + +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
+M G P+ + L+DG + G + +A + +M + G +P++
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV-------------- 415
Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
+ ++ +C G + A +L + E G PD+++Y+++++GFC+ +++ AL++ +E
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
+ KG++PD++TY +LI G R ++A ++ +M + G P Y +L+ C
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 582 FSLAFSLW------------LQYLRDISGRDDES-MKSIEEFLQKGEVENAI------QG 622
A L + Y I+G + +S + + L K E ++
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
L+E ++ + + G C G + EA +F ++ + +IHG C+
Sbjct: 596 LIE---NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
G + A ++ +K+GF+L L+++L
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/556 (25%), Positives = 259/556 (46%), Gaps = 31/556 (5%)
Query: 88 ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
E+ VS + +LI G+ G+ + AL F KM+ C P+V YN +++ + +
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
+ M PN+++++++INGL + G+ + +L EM +RG ++ TY
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
+I G C+ +A + +M G +P + Y +L++ CK ++ A+ L
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
G P +Y+ L+DG + +EAY R+M + P VV Y +I G GK++DA
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
+ +L DM+E+G+ PD Y+ ++ GFC +D+A ++ E+ ++ P+T T++ LI G
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
C +A L+ +M + G P + ALI+ C G+LEKA L +M E G P
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP- 553
Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN------ 500
D + ++ +A ++L++L ++P +TY+
Sbjct: 554 -------------DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 501 ---------SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
SLI GFC G + A ++F+ + K +PD Y +I+G R A+
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
++ +M ++G +L+ + K + S+ + LR + E K + E
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEIN 720
Query: 612 QK-GEVENAIQGLLEM 626
+ G ++ + L EM
Sbjct: 721 HREGNMDVVLDVLAEM 736
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 226/482 (46%), Gaps = 63/482 (13%)
Query: 47 GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
GF+ A + + S + VI+ L + L E+ S+ + LI
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
GY K G+ +AL ++ EM++ P
Sbjct: 319 GYCKEGNFHQAL-----------------------------------VMHAEMLRHGLTP 343
Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
+++T++ LI+ + K+G A++ LD+M RG+ PN+ TYT ++ G Q +EAYR+
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
+M D+G SP V YNAL+NG C ++++A+A+L ++ G P + SYS ++ G R+
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
DEA R+M E+ I+PD + Y +I+G E + K+A L +M G+ PD + Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
ALI +C G L++A L E+ ++ LP+ T+++LI G+ + +A++L K+
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 407 AGCFPSVGMFNALID---------------GLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
PS ++ LI+ G C G + +A+ +F M
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM------------ 631
Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
G N D + M+ +C AG I KAY + ++ +SG L +T +L+ K G
Sbjct: 632 -LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 512 IN 513
+N
Sbjct: 691 VN 692
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 203/437 (46%), Gaps = 33/437 (7%)
Query: 62 SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
S + +++I + K + + LD++R + + L+ G+ + G +A
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
+M + P V YNA++N A+AV +M + P++V++S +++G +S
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
+ A+++ EM ++GI P+ TY+ +I G C+ R EA L+ +M G PD Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
AL+N +C +++AL L + G +P + +YS LI+GL + R EA K+F
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
E+ P V Y +I S++ + +V +LIKGFC G++ +
Sbjct: 584 EESVPSDVTYHTLIEN-------------CSNIEFKSVV-------SLIKGFCMKGMMTE 623
Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
A + + ++ P+ + I+I G CR G + A L+ +M K+G AL+
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683
Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
L K G++ + N + + LR + + + + +VE G +
Sbjct: 684 ALHKEGKVNELNSVIVHV---------LRSCE----LSEAEQAKVLVEINHREGNMDVVL 730
Query: 482 KILMQLAESGNLPDIIT 498
+L ++A+ G LP+ I+
Sbjct: 731 DVLAEMAKDGFLPNGIS 747
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 258 bits (660), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 156/524 (29%), Positives = 261/524 (49%), Gaps = 13/524 (2%)
Query: 55 AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
K + L S + ++S + K FDL ++++ +S + +LI+ + +
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
AL GKM + +P + +++LN + A+A+ +MV++ P+ +TF+ L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
I+GL K A+ ++D M QRG PN TY +V++GLC+ D A+ L KM+ +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
D V +N +++ CK R VD+AL L + E G P + +YS LI L R+ +A
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
M E+KI P++V + +I + GK +A KL DM +R I PD + YN+LI GFC
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
LD+A+ + + +D P+ T+ LI G C++ V+D +LF +M G
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
+ LI GL G+ + A +F +M P D + +++ C
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-------------DIMTYSILLDGLCNN 408
Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
G + KA ++ + +S DI Y ++I G CK G ++ LF L LKG++P+ VTY
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
T+I+GL ++A+ + +M ++G P Y +L+ R
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Score = 253 bits (647), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 258/525 (49%), Gaps = 27/525 (5%)
Query: 116 KALESFGKMKEFD-------------CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
K L + KMK+FD ++Y YN ++N R+ LALA+ +M+KL
Sbjct: 15 KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 74
Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
P+IVT S L+NG + A+ ++D+M + G P+ T+T +I GL N+A EA
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
L +M GC P+ V Y ++NG CK +D A LL E + ++ +ID
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
L + + D+A +++M + I P+VV Y +I L G+ DA +LLSDM E+ I P+
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
+NALI F G +A L ++ KR P+ T+ LI G C + +D A+++F
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
M CFP + +N LI G CK+ +E LF +M S G V D
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM------------SHRG-LVGDTV 361
Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
+ T+++ G A K+ Q+ G PDI+TY+ L++G C G + AL++F +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
Q ++ D Y T+I G+ + + +D + +F + G P+ Y ++++ C +R
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 583 SLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
A++L + D D + + I L+ G+ + + + EM
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 164/588 (27%), Positives = 278/588 (47%), Gaps = 57/588 (9%)
Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
MVK LP+I F+ L++ ++K K ++ I + ++M + GI N +TY I+I+ C+ ++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
A L KM G P V ++LLNG+C +R+ +A+AL+ + G+ P +++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
LI GLF + EA A +M + +P++V YGV++ GL + G + A LL+ M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
I D +N +I C +D A +L E+ + PN T++ LI +C G DA
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR 457
+L + M + P++ FNALID K G+ +A L M + +P +F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF--------- 291
Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
+ +++ +C + KA ++ + PD+ TYN+LI GFCK + +
Sbjct: 292 -----TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
LF+E+ +GL D+VTY TLI GL ++A ++F QM +G P Y L+ C
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
K A ++ +++QK E++ +
Sbjct: 407 NNGKLEKALEVF-------------------DYMQKSEIK---------------LDIYI 432
Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFL 694
YT + G+C+ G+V + ++F L K + P+ V +I GLC + L A +
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSL-SLKGV--KPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
++G + N L+R+ L +D K + L+ M+S + DA
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHL--RDGDKAASAELIREMRSCRFVGDA 535
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 197/397 (49%), Gaps = 8/397 (2%)
Query: 68 AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
V++ L K DL + L+++ + + +F +I K + AL F +M+
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
+P+V Y+++++ + A + +M++ PN+VTF+ LI+ K GK A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
K+ D+M +R I P+ FTY +I+G C +R D+A ++F M C PD YN L+ G
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
FCK +RV++ L R G V +Y+ LI GLF D A +++M + + PD
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
++ Y +++ GL GK++ A+++ M++ I D Y Y +I+G C G +D L
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
+ + PN T+ +I G+C ++ +A L KM++ G P G +N LI + G
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 428 ELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHD 460
+ + L +M +G T+ L N +HD
Sbjct: 515 DKAASAELIREMRSCRFVGDASTIGLV----ANMLHD 547
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 40/256 (15%)
Query: 40 KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
K+K + G F + R + + + +I L D + ++ S V
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ +L+ G G EKALE F M++ + + D+YIY
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY----------------------- 433
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
+ +I G+ K+GK + + ++ +G+ PN TY +ISGLC
Sbjct: 434 ------------TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
EAY L KMK+ G PD YN L+ LR D+A + L+R FV +
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRA--HLRDGDKAASAELIREMRSCRFVGDASTIG 539
Query: 278 CLIDGLFRAKRYDEAY 293
L+ + R D+++
Sbjct: 540 -LVANMLHDGRLDKSF 554
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 243/477 (50%), Gaps = 26/477 (5%)
Query: 116 KALESFGKMKEFD-------------CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
K L + KMK+FD ++Y YN ++N R+ LALA+ +M+KL
Sbjct: 90 KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
P+IVT S L+NG + A+ ++D+M + G P+ T+T +I GL N+A EA
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
L +M GC P+ V Y ++NG CK +D A LL E + YS +ID
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
L + + D+A + +M + + P+V+ Y +I L + DA +LLSDM ER I P+
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
+NALI F G L +A L E+ KR P+ T++ LI G C + +D+A+ +F
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
M CFP+V +N LI+G CKA +++ LF +M SQ G V +
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM------------SQRG-LVGNTV 436
Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
+ T++ + A A + Q+ G P+I+TYN+L++G CK G + A+ +F+ L
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
Q + P TY +I G+ + + ED + +F + G P +Y ++++ CR+
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 259/520 (49%), Gaps = 15/520 (2%)
Query: 50 FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
F K + L S + ++S + K FDL ++++ +S + +LI+ +
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
+ AL GKM + +P + +++LN + A+A+ +MV++ P+ +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
TF+ LI+GL K A+ ++D M QRG PN TY +V++GLC+ D A+ L KM
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
+ + + V Y+ +++ CK R D+AL L E G P + +YS LI L +R+
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
+A M E KI P+VV + +I + GK+ +A KL +M +R I PD + Y++L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
I GFC LD+A+ + + +D PN T+ LI G C+ +D+ +LF +M + G
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
+ + LI G +A + + A ++F +M G +P + + T++
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM--------------TYNTLL 477
Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
+ C G + KA + L S P I TYN +I G CK G + LF L LKG++
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
PD + Y T+I+G R +E+A +F +M ++G P
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 230/521 (44%), Gaps = 27/521 (5%)
Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
Y +L ++D+A+ L K +P + ++ L+ + + K++D + KM
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
I ++ Y ++I ++ A+ LL M + G P ++L+ G+C +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
A +L ++ + P+T TFT LI G+ + +A L ++M + GC P++ + ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 421 DGLCKAGELEKANLLFYKMEIGKNPT-----------------------LFLRLSQGGNR 457
+GLCK G+++ A L KME K LF + G R
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
+ + +++ C A ++L + E P+++T+N+LI+ F K G + A K
Sbjct: 293 -PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
L+ E+ + + PD TY +LING DR ++A +F M C P+ Y +L+ C
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 578 RRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
+ ++ L+ + R + G I F Q + +NA +M +
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
Y L GLC++G++++A+ +F L K T + +I G+CK G ++ D+F
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
G ++P V Y F + K A L +M+ G
Sbjct: 532 SLKG--VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 35/209 (16%)
Query: 29 LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
++ T+ + K K G F ++R + + + + +I + D +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 89 LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
+ S V + L+ G K G EKA+ F ++ +P +Y YN
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN----------- 509
Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
++I G+ K+GK E + ++ +G+ P+ Y
Sbjct: 510 ------------------------IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPD 237
+ISG C+ +EA LF KM++ G PD
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPD 574
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/645 (27%), Positives = 317/645 (49%), Gaps = 34/645 (5%)
Query: 20 PALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF 79
P+L+ ++ +S + V+S+ +P+ F W ++ R + + A + LL NG+
Sbjct: 79 PSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGY 138
Query: 80 DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM---KEFDCQPDVYI- 135
V VV + ++I VGD L+ KM + F+ + + I
Sbjct: 139 --------------VGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIG 184
Query: 136 -YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
YN +LN R L VY EM++ PNI T++ ++NG K G E A + + ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
+ G+ P+ FTYT +I G CQ D A+++F +M GC + VAY L++G C RR+
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
DEA+ L + D P + +Y+ LI L ++R EA ++M E I+P++ Y V+
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
I L K + A +LL M E+G++P+ YNALI G+C G+++ A + + R
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
PNT T+ LI G C++ V A + NKM + P V +N+LIDG C++G + A
Sbjct: 425 SPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA-- 481
Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
Y++ L L V D+ + +M++ C + + +A + L + G P
Sbjct: 482 --YRL---------LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
+++ Y +LI+G+CK G ++ A + +++ K P+S+T+ LI+GL + ++A +
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQK 613
+M + G P+ + L+ + F A+S + Q L + D + + I+ + ++
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
G + +A + +M L Y+ + G GQ A ++
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/631 (27%), Positives = 295/631 (46%), Gaps = 52/631 (8%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ LI GY + D + A + F +M C+ + Y +++ + A+ ++ +M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
C P + T+++LI L S + A+ ++ EM + GI PN TYT++I LC +
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
++A L +M + G P+ + YNAL+NG+CK +++A+ ++ E P +Y+ L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
I G ++ + +A KM E K+ PDVV Y +I G +G A +LLS M +RG+
Sbjct: 435 IKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
VPD + Y ++I C +++A L + ++ PN +T LI G C+ G VD+A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
+ KM C P+ FNALI GLC G+L++A LL KM +IG PT+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV----------- 602
Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
++ ++ + G AY Q+ SG PD TY + I +C+ G + A +
Sbjct: 603 ---STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY----KSLMT 574
+++ G+ PD TY +LI G + + AF + +M GC PS + K L+
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 575 WSCRRRKFS----LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA------IQGLL 624
++K S A S +++ D ++ +E+ ++ NA I G+
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEF--------DTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 625 EM----------DFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
E+ D + ++P + L C+ + EA + ++ +
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831
Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
SC LI GL K+G + VF L+ G+
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 258/549 (46%), Gaps = 53/549 (9%)
Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
Y +++ L + DE +++++M + P+ YN ++NG+CKL V+EA +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
+ G P +Y+ LI G + K D A+ + +M + + V Y +I GL A ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
+AM L M++ P Y LIK C +A +L E+ + PN HT+T+LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
+C + A++L +M + G P+V +NALI+G CK G +E A + ME
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES---- 421
Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
R R +++ +++ YC + +HKA +L ++ E LPD++TYNSLI+G
Sbjct: 422 ----RKLSPNTRTYNE-----LIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
C+ GN + A +L + +GL PD TY ++I+ L + R E+A +F + Q G P+
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
+Y +L+ C+ +G+ DE+ +E+ L K + N++
Sbjct: 532 VVMYTALIDGYCK------------------AGKVDEAHLMLEKMLSKNCLPNSLT---- 569
Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
+ + GLC DG++KEA + +V+ T + LIH L K G
Sbjct: 570 ------------FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
D A F L +G +P Y + ++ + + A ++ +M+ G D Y
Sbjct: 618 FDHAYSRFQQMLSSG--TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 746 PKTKSLLPG 754
SL+ G
Sbjct: 676 ---SSLIKG 681
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 228/505 (45%), Gaps = 35/505 (6%)
Query: 89 LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
+ S +S + + LI GY K + KA+ KM E PDV YN++++ R
Sbjct: 419 MESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
F A + M +P+ T++ +I+ L KS + E A + D + Q+G+ PN YT
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
+I G C+ + DEA+ + KM C P+ + +NAL++G C ++ EA L K G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
P + + + LI L + +D AY+ +++M +PD Y I+ G++ DA
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI--- 385
+++ MRE G+ PD + Y++LIKG+ DLG + A + + P+ HTF LI
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 386 ---------------CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
C M D +L KM + P+ + LI G+C+ G L
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 431 KANLLFYKMEI--GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
A +F M+ G +P+ + ++ C ++A K++ +
Sbjct: 778 VAEKVFDHMQRNEGISPSELV--------------FNALLSCCCKLKKHNEAAKVVDDMI 823
Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
G+LP + + LI G K G +F+ L G D + + +I+G+ + E
Sbjct: 824 CVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE 883
Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLM 573
+ +F M +NGC S Y L+
Sbjct: 884 AFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 178/420 (42%), Gaps = 19/420 (4%)
Query: 40 KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
++ N +R R + + +++I L K + D L V+
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
++ LI GY K G ++A KM +C P+ +NA+++ A + +M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
VK+ P + T ++LI+ L K G + A +M G P+ TYT I C+ R
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
+A + KM+++G SPD Y++L+ G+ L + + A +L+ G P ++ L
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 280 IDGLFRAK------------------RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
I L K +D KM E + P+ Y +I G+ E
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 322 GKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
G ++ A K+ M R GI P +NAL+ C L ++A + ++ LP +
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
+LICG+ + G + +F + + G + + +IDG+ K G +E LF ME
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 142/310 (45%), Gaps = 19/310 (6%)
Query: 62 SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
+ ++++ +I LLK FD + ++ S + + I Y + G A +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL--S 179
KM+E PD++ Y++++ A V M C P+ TF LI L
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Query: 180 KSGKT----------------EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
K GK + +++L++M + + PN +Y +I G+C++ A
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 224 RLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
++F M ++ G SP + +NALL+ CKL++ +EA ++ G +P+L S LI G
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
L++ + + ++ + + D + + ++I G+ + G V+ +L + M + G
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFS 900
Query: 343 TYCYNALIKG 352
+ Y+ LI+G
Sbjct: 901 SQTYSLLIEG 910
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 256 bits (653), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 193/704 (27%), Positives = 325/704 (46%), Gaps = 98/704 (13%)
Query: 46 VGFRFFIWAAKRKRLRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVF 101
R F A+K+ +F+ A+ +L + FD + L++++S + + F
Sbjct: 65 AALRLFNLASKKP---NFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF 121
Query: 102 FVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
+LI Y + ++ L M EF +PD + YN +LN+ L + +M
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
P++ TF++LI L ++ + AI ML++M G++P++ T+T V+ G + D
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 241
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE-KDGFVPRLGSYSCL 279
A R+ +M + GCS V+ N +++GFCK RV++AL ++ +DGF P +++ L
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
++GL +A A M +E +PDV Y +I GL + G+VK+A+++L M R
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC--RN------ 391
P+T YN LI C +++A L + + LP+ TF LI G+C RN
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 392 ---------------------------GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
G +D+A + +ME +GC SV +N LIDG C
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
KA + +A +F +ME+ G +R + + T+++ C + + A +++
Sbjct: 482 KANKTREAEEIFDEMEV-----------HGVSR--NSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
Q+ G PD TYNSL+ FC+ G+I A + + + G PD VTYGTLI+GL +
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
R E A ++ + G +P Y ++ R+RK + A +L+
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLF--------------- 633
Query: 605 KSIEEFLQKGEV-ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ-DGQVKEALNIFSVLV 662
E L++ E +A+ Y I GLC G ++EA++ L+
Sbjct: 634 ---REMLEQNEAPPDAVS----------------YRIVFRGLCNGGGPIREAVDFLVELL 674
Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
E K V S + ++ G L L+M+ L L N + + R
Sbjct: 675 E-KGFVPEFSSLYML----AEGLLTLSMEETLVKLVNMVMQKAR 713
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 201/513 (39%), Gaps = 88/513 (17%)
Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMR------------------------------ 335
P+ LY ++ L +G D K+L DM+
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 336 ------ERGIVPDTYCY-----------------------------------NALIKGFC 354
E G+ PDT+ Y N LIK C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
L A + ++ +P+ TFT ++ G G +D A ++ +M + GC S
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
N ++ G CK G +E A L + E+ F D+ + T+V C A
Sbjct: 261 SVNVIVHGFCKEGRVEDA--LNFIQEMSNQDGFF----------PDQYTFNTLVNGLCKA 308
Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
G + A +I+ + + G PD+ TYNS+I+G CK+G + A+++ ++ + P++VTY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
TLI+ L + ++ E+A + + G P + SL+ C R +A L+ + +R
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF-EEMR 427
Query: 595 DISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
DE + I+ KG+++ A+ L +M+ + Y + G C+ + +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
EA IF + + LI GLCK ++ A + + G N LL
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
D KK A ++ M S G + D Y
Sbjct: 548 THFCRGGDIKK--AADIVQAMTSNGCEPDIVTY 578
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 122/276 (44%), Gaps = 10/276 (3%)
Query: 61 RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
RS + + +I K N + DE+ VS S + LI G K E A +
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
+M +PD Y YN++L R A + M C P+IVT+ LI+GL K
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFV 239
+G+ EVA K+L + +GI Y VI GL + + EA LF +M + + PD V
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 240 AYNALLNGFCK-LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
+Y + G C + EA+ L + GFVP S L +GL +E
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLS-MEETLVKLVN 706
Query: 299 MFEEKI---EPDVVLYGVMIRGLSEAGKVKDAMKLL 331
M +K E +V M++GL + K +DA+ L
Sbjct: 707 MVMQKARFSEEEV----SMVKGLLKIRKFQDALATL 738
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 255 bits (651), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 170/586 (29%), Positives = 282/586 (48%), Gaps = 56/586 (9%)
Query: 123 KMKEFDCQPDVYIYNAVLN---IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
+M E C P+V+ YN +L R Q L L + + P++V+++ +ING
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
K G ++ A EM RGILP+ TY +I+ LC+ D+A + M +G PD +
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
YN++L+G+C + EA+ L+ DG P + +YS L+D L + R EA + M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
+ ++P++ YG +++G + G + + LL M GI PD Y ++ LI + G +
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
DQA + ++ ++ PN T+ +I +C++G V+DA F +M G P ++N+L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 420 IDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
I GLC + E+A L +M I N F ++++ +C G
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFF----------------NSIIDSHCKEGR 491
Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
+ ++ K+ + G P++ITYN+LING+C G ++ A+KL + GL+P++VTY T
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
LING ++ R EDA +F +M +G +P Y ++ + R+ + A L++
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV------ 605
Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
R ES IE L+ Y I L GLC++ +AL
Sbjct: 606 --RITESGTQIE--------------------------LSTYNIILHGLCKNKLTDDALQ 637
Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
+F L + + +I L K G D A D+F+ NG +
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 257/537 (47%), Gaps = 44/537 (8%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
+ +I+G++K GD +KA ++ +M + PDV YN+++ + Q A+ V MV
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
K +P+ +T++ +++G SG+ + AI L +M G+ P+ TY++++ LC+ R
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
EA ++F M G P+ Y LL G+ + E LL ++G P +S LI
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
+ + D+A + KM ++ + P+ V YG +I L ++G+V+DAM M + G+
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
P YN+LI G C ++A L +E+ R NT F +I C+ G V +++KL
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498
Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
F M + G P+V +N LI+G C AG++++A L M +G P
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP-------------- 544
Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
+ + T++ YC + A + ++ SG PDIITYN ++ G + A +L+
Sbjct: 545 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 604
Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
+ G + + TY +++GL + +DA ++F QN C LM
Sbjct: 605 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMF----QNLC---------LMDLKLEA 651
Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV----------ENAI-QGLLE 625
R F++ L+ GR+DE+ F G V EN I QGLLE
Sbjct: 652 RTFNIMIDALLKV-----GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 151/628 (24%), Positives = 272/628 (43%), Gaps = 54/628 (8%)
Query: 29 LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
+S TTV + K + + + R L + +++I+ L K D + L+
Sbjct: 197 VSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT 256
Query: 89 LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
+ V + ++ GY G ++A+ KM+ +PDV Y+ +++ +
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
+ A ++ M K P I T+ L+ G + G +LD M + GI P+ + ++I
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
+I + + D+A +F KM+ G +P+ V Y A++ CK RV++A+ +G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
P Y+ LI GL +++ A +M + I + + + +I + G+V ++
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
KL M G+ P+ YN LI G+C G +D+A L + PNT T++ LI G
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
C+ ++DA LF +ME +G P + +N ++ G LF L+
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQG------------LFQTRRTAAAKELY 604
Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
+R+++ G ++ ++ TYN +++G CK
Sbjct: 605 VRITESGTQI------------------------------------ELSTYNIILHGLCK 628
Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
+ AL++F+ L L L+ ++ T+ +I+ L +V R ++A +F NG P+
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM 626
Y+ LM + + + D D M + + E LQ+GE+ A L +
Sbjct: 689 YR-LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747
Query: 627 DFKLNDFQLAPYTIWL-IGLCQDGQVKE 653
D K F L T L I L G+ +E
Sbjct: 748 DEK--HFSLEASTASLFIDLLSGGKYQE 773
Score = 169 bits (429), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 154/596 (25%), Positives = 272/596 (45%), Gaps = 43/596 (7%)
Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
E A + DE+ +RG + + ++ + + + A R + +M +G +PD Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90
Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY-RKMF 300
L+ C+ R+D A L + K GF +++ L+ GL KR +A R+M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL---SDMRERGIVPDTYCYNALIKGFCDLG 357
E P+V Y ++++GL + + ++A++LL +D R G PD Y +I GF G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
D+A S E+ R LP+ T+ +I +C+ +D A ++ N M K G P +N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNPT------LFLRLSQGG-----NRVHDK---- 461
+++ G C +G+ ++A KM G P L L + G ++ D
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 462 ------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
+ T+++ Y T G + + + +L + +G PD ++ LI + K G ++ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
+ +F +++ +GL P++VTYG +I L + R EDA F QM G +P VY SL+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 576 SCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEV---ENAIQGLLEMDFKLN 631
C K+ A L L+ L R I I+ ++G V E + ++ + K N
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
+ Y + G C G++ EA+ + S +V + LI+G CK ++ A+
Sbjct: 511 ---VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 692 VFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
+F +G + P + Y +L+ L ++ + A L R+ G ++ Y
Sbjct: 568 LFKEMESSG--VSPDIITYNIILQGLFQTR--RTAAAKELYVRITESGTQIELSTY 619
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 44/271 (16%)
Query: 77 NGFDLYWQTLDE---LRSGNVSVV----SDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
NG+ L + +DE L SG VSV + + LI+GY K+ E AL F +M+
Sbjct: 519 NGYCLAGK-MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
PD+ YN +L F+ + A +Y + + + T++++++GL K+ T+ A++
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEA------------------YRL------ 225
M + + T+ I+I L ++ R DEA YRL
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697
Query: 226 -----------FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
FL M+D+GC+ D N ++ + + A L ++ F
Sbjct: 698 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 757
Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
+ S ID L +Y E Y + + ++ IE
Sbjct: 758 TASLFID-LLSGGKYQEYYRFLPEKYKSFIE 787
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 191/686 (27%), Positives = 310/686 (45%), Gaps = 27/686 (3%)
Query: 24 PLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLY 82
PLLP VT+VI K+P F K + + ++ +VI L F+
Sbjct: 4 PLLP----KHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAM 59
Query: 83 WQTLDELRS--GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
+ L ++R GN ++ V+ + Y + G ++A+ F +M +DC+P V+ YNA++
Sbjct: 60 EEVLVDMRENVGN-HMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIM 118
Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
++ F A VY M P++ +F++ + K+ + A+++L+ M+ +G
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCE 178
Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
N Y V+ G + N E Y LF KM SG S +N LL CK V E L
Sbjct: 179 MNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
L K G +P L +Y+ I GL + D A + E+ +PDV+ Y +I GL +
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298
Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
K ++A L M G+ PD+Y YN LI G+C G++ A + + +P+ T
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANLLFYKM 439
+ LI G+C G + A LFN+ G P+V ++N LI GL G LE A L
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
E G P + + +V C G + A ++ + G PDI T+
Sbjct: 419 EKGLIPEV--------------QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
N LI+G+ + AL++ + G+ PD TY +L+NGL + + ED + M +
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM--KSIEEFLQKGEVE 617
GC P+ + L+ CR RK A L L+ +++ S D I+ F + G+++
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGL-LEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 618 NAIQGLLEMDFKLNDFQLAP-YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
A +M+ P Y I + + V A +F +V+ + +
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFI 702
+ G CK G ++L L ++NGFI
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENGFI 669
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/594 (25%), Positives = 274/594 (46%), Gaps = 51/594 (8%)
Query: 59 RLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
R++SF S +P+ + L+ + S + + ++ G+Y+ +
Sbjct: 152 RMKSFCKTS-------RPHA---ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
E FGKM + +N +L + +K + +++K LPN+ T++L I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
+ G+ + A++M+ + ++G P+ TY +I GLC+ ++ EA KM + G PD
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
YN L+ G+CK V A ++ +GFVP +Y LIDGL + A A + +
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
+ I+P+V+LY +I+GLS G + +A +L ++M E+G++P+ +N L+ G C +G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
+ A L + + P+ TF ILI G +++A ++ + M G P V +N+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLF---------------------LRLSQGGN 456
L++GLCK + E + M E G P LF L + +
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII-TYNSLINGFCKVGNINGA 515
D + T+++ +C G + AY + ++ E+ + TYN +I+ F + N+ A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621
Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
KLF+E+ + L PD TY +++G + ++ +M +NG PS ++
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
C + R E+ I +QKG V A+ + ++D K
Sbjct: 682 LC------------------VEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKK 717
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 138/580 (23%), Positives = 236/580 (40%), Gaps = 56/580 (9%)
Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR---ADEAYRLF 226
T+ +I L GK E ++L +M + + N + + + R EA +F
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99
Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
+M C P +YNA+++ D+A + G P + S++ + +
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159
Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
R A M + E +VV Y ++ G E + +L M G+ +
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219
Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
N L++ C G + + L ++ KR LPN T+ + I G+C+ G +D A ++ + +
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
G P V +N LI GLCK + ++A + KM G P D +
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP--------------DSYTYN 325
Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
T++ YC G++ A +I+ +G +PD TY SLI+G C G N AL LF E K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
G++P+ + Y TLI GL +A ++ +M + G P + L+ C+ S A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
L ++ + KG + + + I + G
Sbjct: 446 DGL------------------VKVMISKGYFPD----------------IFTFNILIHGY 471
Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
+++ AL I V+++ + L++GLCK + M+ + ++ G
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 706 RVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
N LL SL + K A LL MK+ + DA +
Sbjct: 532 FTFNILLESL--CRYRKLDEALGLLEEMKNKSVNPDAVTF 569
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 189/681 (27%), Positives = 321/681 (47%), Gaps = 52/681 (7%)
Query: 86 LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
L E+ S VS+ + + +LI G K + + A +M Y+Y+ + + +
Sbjct: 300 LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSK 359
Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
+ + A A++ M+ +P ++ LI G + ++L EM +R I+ + +T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419
Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
Y V+ G+C D AY + +M SGC P+ V Y L+ F + R +A+ +L+ +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
+ G P + Y+ LI GL +AKR DEA ++ +M E ++P+ YG I G EA +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
A K + +MRE G++P+ LI +C G + +A S + + L + T+T+L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
G+ +N VDDA+++F +M G P V + LI+G K G ++KA+ +F +M E G
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
P + + ++ +C +G I KA ++L +++ G P+ +TY ++I+
Sbjct: 660 PNVII--------------YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
G+CK G++ A +LF E++LKGL PDS Y TL++G R++ E A IFG + GC
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCAS 764
Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI-QGL 623
S A + +L+ W + K L K EV N + G
Sbjct: 765 STAPFNALINWVFKFGKTEL----------------------------KTEVLNRLMDGS 796
Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
+ K ND Y I + LC++G ++ A +F + + T + L++G K
Sbjct: 797 FDRFGKPND---VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
G VF + G + P Y + F K+ A L+ +M + D C
Sbjct: 854 GRRAEMFPVFDEAIAAG--IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 744 LYPKT--KSLLPGPWNTREME 762
+ ++LL G EME
Sbjct: 912 KLSISTCRALLSGFAKVGEME 932
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 247/542 (45%), Gaps = 59/542 (10%)
Query: 40 KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
+ KN + G+ + KR + S + V+ + D + + E+ +
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
++ LI + + A+ +MKE PD++ YN+
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS--------------------- 492
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
LI GLSK+ + + A L EM + G+ PN FTY ISG + +
Sbjct: 493 --------------LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
A + +M++ G P+ V L+N +CK +V EA + RS G + +Y+ L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
++GLF+ + D+A +R+M + I PDV YGV+I G S+ G ++ A + +M E G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
P+ YN L+ GFC G +++A+ L E+ + PN T+ +I G C++G + +A +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR-- 457
LF++M+ G P ++ L+DG C+ ++E+A +F G N+
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-----------------GTNKKG 761
Query: 458 -VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG----NLPDIITYNSLINGFCKVGNI 512
A ++ G ++L +L + P+ +TYN +I+ CK GN+
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
A +LF ++Q L P +TY +L+NG ++ R + F +F + G P +Y +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 573 MT 574
+
Sbjct: 882 IN 883
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 239/521 (45%), Gaps = 25/521 (4%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+ +I L+ + F + L E++ ++ + LI G K ++A +M E
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
+P+ + Y A ++ F A EM + LPN V + LIN K GK
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A M +GIL + TYT++++GL + ++ D+A +F +M+ G +PD +Y L+N
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
GF KL + +A ++ ++G P + Y+ L+ G R+ ++A +M + + P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
+ V Y +I G ++G + +A +L +M+ +G+VPD++ Y L+ G C L +++A ++
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI- 754
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG-----MFNALID 421
K+ +T F LI + + G + ++ N++ G F G +N +ID
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD-GSFDRFGKPNDVTYNIMID 813
Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
LCK G LE A LF++M Q N + + +++ Y G + +
Sbjct: 814 YLCKEGNLEAAKELFHQM-------------QNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV-----TYGT 536
+ + +G PD I Y+ +IN F K G AL L ++ K D T
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
L++G +V E A ++ M + P A L+ SC
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 153/637 (24%), Positives = 266/637 (41%), Gaps = 96/637 (15%)
Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
+FS L L G E A+ +++ M +R + +IV R + +
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIV--------RCSQEF------ 144
Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
G S D V + L +G+ ++EA+ + S VPRL L+D L R R
Sbjct: 145 --VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202
Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK---------------------DAM 328
D + Y+ M E + DV Y ++I AG V+ A+
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262
Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL---- 384
KL M +G+VP Y Y+ LI G C + L+ A+SL VE+ + HT+++L
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 385 -------------------------------ICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
IC M + G+++ A+ LF+ M +G P
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
+ +LI+G C+ + + L +M + N V + T+V+ C+
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEM-------------KKRNIVISPYTYGTVVKGMCS 429
Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
+G + AY I+ ++ SG P+++ Y +LI F + A+++ KE++ +G+ PD
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
Y +LI GL + R ++A +M +NG P+ Y + ++ +F+ A +++ +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYVKEM 548
Query: 594 RDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
R+ ++ + + I E+ +KG+V A M + YT+ + GL ++ +V
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 652 KEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
+A IF E + P LI+G K G + A +F ++ G L P V
Sbjct: 609 DDAEEIFR---EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVI 663
Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
Y + F + + A LL M G +A Y
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/597 (26%), Positives = 270/597 (45%), Gaps = 66/597 (11%)
Query: 43 NPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVF 101
N F W + R SF +I L F + L +++ + +F
Sbjct: 90 NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149
Query: 102 FVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
++ Y K G + +M+ + C+P YN VL I +A V+Y+M+
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
P + TF +++ + + A+ +L +MT+ G +PN Y +I L + NR +
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
EA +L +M GC PD +N ++ G CK R++EA ++ GF P +Y L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD-------------- 326
+GL + R D A + +F +P++V++ +I G G++ D
Sbjct: 330 NGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 327 ----------------------AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
A+++L DMR +G P+ Y Y L+ GFC LG +D+A +
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
+ E+ PNT F LI C+ + +A ++F +M + GC P V FN+LI GLC
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 425 KAGELEKA-----------------------NLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
+ E++ A N + EI + L + G+ + D+
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL-DE 564
Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
+ ++++ C AG + KA + ++ G+ P I+ N LING C+ G + A++ KE
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
+ L+G PD VT+ +LINGL R R ED +F ++ G P + +LM+W C+
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/563 (27%), Positives = 269/563 (47%), Gaps = 51/563 (9%)
Query: 62 SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
+F S + V+ +L+ N + ++ S + F V++ + V + + AL
Sbjct: 181 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLL 240
Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
M + C P+ IY +++ + AL + EM + C+P+ TF+ +I GL K
Sbjct: 241 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 300
Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--------- 232
+ A KM++ M RG P+ TY +++GLC+I R D A LF ++
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLI 360
Query: 233 -----------------------GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
G PD YN+L+ G+ K V AL +L G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
P + SY+ L+DG + + DEAY +M + ++P+ V + +I + ++ +A++
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
+ +M +G PD Y +N+LI G C++ + A L ++ + NT T+ LI
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
R G + +A+KL N+M G +N+LI GLC+AGE++KA LF KM L
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM---------L 591
Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
R + + S ++ C +G++ +A + ++ G+ PDI+T+NSLING C+
Sbjct: 592 RDGHAPSNI----SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
G I L +F++LQ +G+ PD+VT+ TL++ L + DA + + ++G P+ +
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 570 KSLMTWSC------RRRKFSLAF 586
L+ RRR ++ AF
Sbjct: 708 SILLQSIIPQETLDRRRFYNAAF 730
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 224/493 (45%), Gaps = 54/493 (10%)
Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
P +Y +V+ L N A +F M P + ++ FC + +D AL+L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
LR K G VP Y LI L + R +EA +MF PD + +I GL +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
++ +A K+++ M RG PD Y L+ G C +G +D A+ L I K P
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355
Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
F LI G +G +DDA+ + + M + G P V +N+LI G K G + A + + M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 440 E-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
G P ++ S +V+ +C G I +AY +L +++ G P+ +
Sbjct: 416 RNKGCKPNVY--------------SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
+N LI+ FCK I A+++F+E+ KG +PD T+ +LI+GL VD + A + M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
G + Y +L I FL++GE++
Sbjct: 522 SEGVVANTVTYNTL----------------------------------INAFLRRGEIKE 547
Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
A + + EM F+ + Y + GLC+ G+V +A ++F ++ + SC LI+
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 679 GLCKRGYLDLAMD 691
GLC+ G ++ A++
Sbjct: 608 GLCRSGMVEEAVE 620
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 245/550 (44%), Gaps = 57/550 (10%)
Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD---EAYRLF 226
+ +LI L +G+ + ++L +M GI+ F ++ IS + ++A + RL
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIV---FKESLFISIMRDYDKAGFPGQTTRLM 169
Query: 227 LKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
L+M++ C P F +YN +L A + P L ++ ++
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229
Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
D A + R M + P+ V+Y +I LS+ +V +A++LL +M G VPD
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
+N +I G C +++A + + R P+ T+ L+ G+C+ G VD A+ LF ++
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
K P + +FN LI G G L+ A + M V D +
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI------------VPDVCTYN 393
Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
+++ Y GL+ A ++L + G P++ +Y L++GFCK+G I+ A + E+
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
GL+P++V + LI+ + R +A IF +MP+ GC P + SL++ C + A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
LWL LRD+ + +G V N + Y +
Sbjct: 514 --LWL--LRDM--------------ISEGVVANTVT----------------YNTLINAF 539
Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
+ G++KEA + + +V + + + LI GLC+ G +D A +F L++G
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 706 RVCNYLLRSL 715
CN L+ L
Sbjct: 600 ISCNILINGL 609
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 252 bits (643), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 262/534 (49%), Gaps = 21/534 (3%)
Query: 61 RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNV------SVVSDVFFVLISGYYKVGDC 114
R+F+S S +L+ D+ L G V S+V F L+S K+
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE--FNKLLSAIAKMKKF 101
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
+ + KM+ + +Y YN ++N R+ LALA+ +M+KL P+IVT S L
Sbjct: 102 DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
+NG + A+ ++D+M + G P+ T+T +I GL N+A EA L +M GC
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
P+ V Y ++NG CK D AL LL E + ++ +ID L + + D+A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
+++M + I P+VV Y +I L G+ DA +LLSDM E+ I P+ +NALI F
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
G +A L ++ KR P+ T+ L+ G C + +D A+++F M CFP V
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
+N LI G CK+ +E LF +M S G V D + T+++
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREM------------SHRG-LVGDTVTYTTLIQGLFHD 448
Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
G A K+ Q+ G PDI+TY+ L++G C G + AL++F +Q ++ D Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
T+I G+ + + +D + +F + G P+ Y ++++ C +R A++L
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/595 (27%), Positives = 284/595 (47%), Gaps = 57/595 (9%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+ ++ MVK LP+IV F+ L++ ++K K +V I + ++M + I+ +TY I+I+
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ ++ A L KM G P V ++LLNG+C +R+ +A+AL+ + G+ P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+++ LI GLF + EA A +M + +P++V YGV++ GL + G A+ LL
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
+ M I D +N +I C +D A +L E+ + PN T++ LI +C
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
G DA +L + M + P++ FNALID K G+ +A L+ M + +P +F
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF-- 366
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
+ ++V +C + KA ++ + PD++TYN+LI GFCK
Sbjct: 367 ------------TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
+ +LF+E+ +GL D+VTY TLI GL ++A ++F QM +G P Y
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
L+ C K A ++ +++QK E++
Sbjct: 475 ILLDGLCNNGKLEKALEVF-------------------DYMQKSEIK------------- 502
Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLD 687
+ YT + G+C+ G+V + ++F L K + P+ V +I GLC + L
Sbjct: 503 --LDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGV--KPNVVTYNTMISGLCSKRLLQ 557
Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
A + ++G + N L+R+ L +D K + L+ M+S + DA
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHL--RDGDKAASAELIREMRSCRFVGDA 610
Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 157/556 (28%), Positives = 263/556 (47%), Gaps = 59/556 (10%)
Query: 50 FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
F K + L S + ++S + K FD+ ++++ + + +LI+ +
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
+ AL GKM + +P + +++LN + A+A+ +MV++ P+ +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
TF+ LI+GL K A+ ++D M QRG PN TY +V++GLC+ D A L KM
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
+ + D V +N +++ CK R VD+AL L + E G P + +YS LI L R+
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
+A M E+KI P++V + +I + GK +A KL DM +R I PD + YN+L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR------------------- 390
+ GFC LD+A+ + + +D P+ T+ LI G C+
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 391 ----------------NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
+G D+AQK+F +M G P + ++ L+DGLC G+LEKA
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 435 LF---YKMEIGKNPTLFLRLSQG---GNRVHDKASL----------------QTMVEQYC 472
+F K EI + ++ + +G +V D L TM+ C
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
+ L+ +AY +L ++ E G LP+ TYN+LI + G+ + +L +E++ D+
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 611
Query: 533 TYGTLINGLQ--RVDR 546
T G + N L R+D+
Sbjct: 612 TIGLVANMLHDGRLDK 627
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 40/256 (15%)
Query: 40 KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
K+K + G F + R + + + +I L D + ++ S V
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ +L+ G G EKALE F M++ + + D+YIY
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY----------------------- 508
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
+ +I G+ K+GK + + ++ +G+ PN TY +ISGLC
Sbjct: 509 ------------TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
EAY L KMK+ G P+ YN L+ LR D+A + L+R FV +
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRA--HLRDGDKAASAELIREMRSCRFVGDASTIG 614
Query: 278 CLIDGLFRAKRYDEAY 293
L+ + R D+++
Sbjct: 615 -LVANMLHDGRLDKSF 629
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 249 bits (637), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 154/524 (29%), Positives = 262/524 (50%), Gaps = 16/524 (3%)
Query: 55 AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
K + S + ++S + K N F+L +++++ +S + + I+ + +
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
AL KM + +PD+ +++LN + A+A+ +MV++ P+ TF+ L
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
I+GL K A+ ++D+M QRG P+ TY V++GLC+ D A L KM+ +
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI 254
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
+ V +N +++ CK R V+ A+ L E G P + +Y+ LI+ L R+ +A
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
M E+KI P+VV + +I + GK+ +A KL +M +R I PDT YN LI GFC
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
LD+A+ + + +D LPN T+ LI G C+ V+D +LF +M + G +
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
+ +I G +AG+ + A ++F +M + PT D + ++ C+
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT-------------DIMTYSILLHGLCSY 481
Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
G + A I L +S +I YN++I G CK G + A LF L +K PD VTY
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTY 538
Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
T+I+GL ++A +F +M ++G P+ Y +L+ + R
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 169/592 (28%), Positives = 284/592 (47%), Gaps = 54/592 (9%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+ ++ +MVK P+IV F+ L++ ++K K E+ I + ++M GI + +TY+I I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ ++ A + KM G PD V ++LLNG+C +R+ +A+AL+ + G+ P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+++ LI GLF + EA A +M + +PD+V YG ++ GL + G + A+ LL
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
+ M I + +N +I C ++ A L E+ + PN T+ LI +C
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
G DA +L + M + P+V FNALID K G+L +A L +M + +P
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP----- 361
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
D + ++ +C + +A ++ + LP+I TYN+LINGFCK
Sbjct: 362 ---------DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
+ ++LF+E+ +GL ++VTY T+I G + + A +F QM N Y
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
L+ C K A ++ ++LQK E+E L
Sbjct: 473 ILLHGLCSYGKLDTALVIF-------------------KYLQKSEME------------L 501
Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
N F Y + G+C+ G+V EA ++F L +VT + +I GLC + L A
Sbjct: 502 NIF---IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT---MISGLCSKRLLQEAD 555
Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
D+F ++G + N L+R+ L +D + + L+ M+S G+ DA
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANL--RDCDRAASAELIKEMRSSGFVGDA 605
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 237/505 (46%), Gaps = 21/505 (4%)
Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
I+ + L I + D+A LF M S P V +N LL+ K+ + + ++L +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
G L +YS I+ R + A A KM + EPD+V ++ G + ++ DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
+ L+ M E G PDT+ + LI G +A +L ++ +R P+ T+ ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPT 446
+C+ G +D A L NKME A +V +FN +ID LCK +E A LF +ME G P
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
+ + +++ C G A ++L + E P+++T+N+LI+ F
Sbjct: 293 V--------------VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
K G + A KL +E+ + + PD++TY LING +R ++A ++F M C P+
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
Y +L+ C+ ++ L+ + R + G I+ F Q G+ ++A +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
M + Y+I L GLC G++ AL IF L + + + +I G+CK G
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 686 LDLAMDVFLYTLKNGFILRPRVCNY 710
+ A D+F ++P V Y
Sbjct: 519 VGEAWDLFC-----SLSIKPDVVTY 538
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 159/331 (48%), Gaps = 4/331 (1%)
Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
LI+ G A M E P+V +NA+++ F++ + A ++ EM++ +
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
P+ +T++LLING + + A +M M + LPN TY +I+G C+ R ++
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
LF +M G + V Y ++ GF + D A + + + + +YS L+ GL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
+ D A ++ + + ++E ++ +Y MI G+ +AGKV +A L + I PD
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535
Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
YN +I G C LL +A L ++ + +LPN+ T+ LI R+ + +L +
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595
Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
M +G F +L+ + G L+K+ L
Sbjct: 596 MRSSG-FVGDASTISLVTNMLHDGRLDKSFL 625
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/654 (27%), Positives = 308/654 (47%), Gaps = 39/654 (5%)
Query: 12 LDTVTPIEPALEPLLPFLSKTTVTSVIMKTK-NPQVGFRFFIWAAKRKRLRSFASNSAVI 70
L P+ +L+P + V+MK K + ++ FF WA R R + S VI
Sbjct: 68 LRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR-RDSNLESLCIVI 126
Query: 71 SMLLKPNGFDLYWQTLD---ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
+ + + + E NV+ FF L+ YK
Sbjct: 127 HLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYK----------------- 169
Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG-KTEV 186
D D +++ + L A V+ +M+ + ++ + ++ + LSK KT
Sbjct: 170 DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
AI + E + G+ N +Y IVI +CQ+ R EA+ L L M+ G +PD ++Y+ ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
G+C+ +D+ L+ ++ G P Y +I L R + EA + +M + I P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
D V+Y +I G + G ++ A K +M R I PD Y A+I GFC +G + +A L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
E++ + P++ TFT LI G C+ G + DA ++ N M +AGC P+V + LIDGLCK
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
G+L+ AN L ++M +IG P +F + ++V C +G I +A K++
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIF--------------TYNSIVNGLCKSGNIEEAVKLVG 515
Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
+ +G D +TY +L++ +CK G ++ A ++ KE+ KGL+P VT+ L+NG
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
ED ++ M G P+ + SL+ C R A +++ G D ++ +
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 606 S-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
+ ++ + ++ A EM K ++ Y++ + G + + EA +F
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 222 bits (566), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 227/484 (46%), Gaps = 50/484 (10%)
Query: 86 LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
L EL+ V+S + +++GY + G+ +K + MK +P+ YIY +++ + R
Sbjct: 271 LMELKGYTPDVIS--YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
A + EM++ LP+ V ++ LI+G K G A K EM R I P+ T
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
YT +ISG CQI EA +LF +M G PD V + L+NG+CK + +A +
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
+ G P + +Y+ LIDGL + D A +M++ ++P++ Y ++ GL ++G ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
+A+KL+ + G+ DT Y L+ +C G +D+A+ + E+ + P TF +L+
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
G C +GM++D +KL N M G P+ FN+L+ C L+ A ++ M
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM------ 622
Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
C+ G+ PD TY +L+ G
Sbjct: 623 --------------------------CSRGV----------------GPDGKTYENLVKG 640
Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
CK N+ A LF+E++ KG TY LI G + + +A +F QM + G
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 566 PAVY 569
++
Sbjct: 701 KEIF 704
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 168/377 (44%), Gaps = 19/377 (5%)
Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
+D + F + + G++ +A+++F KM G SV N + L K
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 432 ANLLFYKM--EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
++ ++ E+G + AS ++ C G I +A+ +L+ +
Sbjct: 229 TAIIVFREFPEVGV--------------CWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
G PD+I+Y++++NG+C+ G ++ KL + ++ KGL+P+S YG++I L R+ + +
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIE 608
A F +M + G P VY +L+ C+R A + + + RDI+ I
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
F Q G++ A + EM K + +T + G C+ G +K+A + + +++
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
+ LI GLCK G LD A ++ K G L+P + Y K A
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 729 LLCRMKSVGYDLDACLY 745
L+ ++ G + D Y
Sbjct: 513 LVGEFEAAGLNADTVTY 529
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)
Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
+++G K G+ E+A++ G+ + D Y +++ + A + EM+
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
P IVTF++L+NG G E K+L+ M +GI PN T+ ++ C N A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
++ M G PD Y L+ G CK R + EA L + + GF + +YS LI G
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
+ K++ EA + +M E + D K+ SD + +G PDT
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAAD-----------------KEIFDFFSDTKYKGKRPDT 719
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 246 bits (628), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 244/480 (50%), Gaps = 16/480 (3%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
F L+S K+ + + +M+ ++Y Y+ +N R+ LALA+ +M+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
KL P+IVT + L+NG + A+ ++D+M + G P+ T+T ++ GL Q N+A
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
EA L +M GC PD V Y A++NG CK D AL LL EK + Y+ +I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
DGL + K D+A+ + KM + I+PDV Y +I L G+ DA +LLSDM E+ I
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWK-RDSLPNTHTFTILICGMCRNGMVDDAQK 399
PD +NALI F G L +A L E+ K + P+ + LI G C+ V++ +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
+F +M + G + + LI G +A + + A ++F +M +S G VH
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-----------VSDG---VH 423
Query: 460 -DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
D + +++ C G + A + + + DI+TY ++I CK G + L
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
F L LKG++P+ VTY T+++G R +E+A +F +M ++G P+ Y +L+ R
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/468 (29%), Positives = 235/468 (50%), Gaps = 25/468 (5%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+ ++ +MVK P+IV FS L++ ++K K ++ I + ++M GI N +TY+I I+
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ ++ A + KM G P V N+LLNGFC R+ EA+AL+ + G+ P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+++ L+ GLF+ + EA A +M + +PD+V YG +I GL + G+ A+ LL
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
+ M + I D YN +I G C +D A L ++ + P+ T+ LI +C
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------------ 439
G DA +L + M + P + FNALID K G+L +A L+ +M
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 440 ------------EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
+ + +F +SQ G V + + T++ + A A + Q+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRG-LVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
G PDI+TYN L++G C GN+ AL +F+ +Q + ++ D VTY T+I L + +
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
ED + +F + G P+ Y ++M+ CR+ A +L+++ D
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/572 (25%), Positives = 264/572 (46%), Gaps = 52/572 (9%)
Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
K + AI + +M + P+ ++ ++S + ++N+ D L +M++ G S + Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
+N FC+ ++ ALA+L K G+ P + + + L++G R EA A +M E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
+PD V + ++ GL + K +A+ L+ M +G PD Y A+I G C G D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
+L ++ K + + +I G+C+ +DDA LFNKME G P V +N LI
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
LC G A+ L M E NP L +++ + G + +A
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVF--------------FNALIDAFVKEGKLVEAE 340
Query: 482 KILMQLAESGN-LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
K+ ++ +S + PD++ YN+LI GFCK + +++F+E+ +GL ++VTY TLI+G
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
+ ++A +F QM +G P Y L+ C A ++
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF----------- 449
Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
E++QK D KL+ + YT + LC+ G+V++ ++F
Sbjct: 450 --------EYMQK------------RDMKLD---IVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
L + ++ G C++G + A +F+ ++G + N L+R+ L +D
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL--RD 544
Query: 721 NKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
+ + L+ M+S G+ DA + ++L
Sbjct: 545 GDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 36/376 (9%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
F L+ G ++ +A+ +M CQPD+ Y AV+N ++ LAL + +M
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
K ++V ++ +I+GL K + A + ++M +GI P+ FTY +IS LC R
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 220 DEAYRLFLKM------------------------------------KDSGCSPDFVAYNA 243
+A RL M K C PD VAYN
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
L+ GFCK +RV+E + + R + G V +Y+ LI G F+A+ D A +++M +
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
+ PD++ Y +++ GL G V+ A+ + M++R + D Y +I+ C G ++
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
L + + PN T+T ++ G CR G+ ++A LF +M++ G P+ G +N LI
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541
Query: 424 CKAGELEKANLLFYKM 439
+ G+ + L +M
Sbjct: 542 LRDGDEAASAELIKEM 557
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 179/368 (48%), Gaps = 2/368 (0%)
Query: 68 AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
AVI+ L K DL L+++ G + ++ +I G K + A + F KM+
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
+PDV+ YN +++ + A + +M++ N P++V F+ LI+ K GK A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 188 IKMLDEMTQ-RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
K+ DEM + + P+ Y +I G C+ R +E +F +M G + V Y L++
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
GF + R D A + + DG P + +Y+ L+DGL + A + M + ++
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
D+V Y MI L +AGKV+D L + +G+ P+ Y ++ GFC GL ++A +L
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
VE+ + LPN+ T+ LI R+G + +L +M G F L+ +
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHD 578
Query: 427 GELEKANL 434
G L+K+ L
Sbjct: 579 GRLDKSFL 586
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 246 bits (628), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 153/506 (30%), Positives = 259/506 (51%), Gaps = 21/506 (4%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-K 125
S++I FD + L +R N ++ F V+ Y K +KA++ F +M
Sbjct: 81 SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140
Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV----KLNCLPNIVTFSLLINGLSKS 181
EF C+ V +N+VLN+ + L+ L Y +V +N PN ++F+L+I L K
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
+ AI++ M +R LP+ +TY ++ GLC+ R DEA L +M+ GCSP V Y
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
N L++G CK + L+ + G VP +Y+ LI GL + D+A + +M
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
K P+ V YG +I GL + + DA++LLS M ERG + + Y+ LI G G ++
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
A SL ++ ++ PN +++L+ G+CR G ++A+++ N+M +GC P+ +++L+
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
G K G E+A ++ +M+ G +R +K +++ C G + +A
Sbjct: 441 GFFKTGLCEEAVQVWKEMD-----------KTGCSR--NKFCYSVLIDGLCGVGRVKEAM 487
Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL---QLKGLRPDSVTYGTLI 538
+ ++ G PD + Y+S+I G C +G+++ ALKL+ E+ + +PD VTY L+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTP 564
+GL A + M GC P
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDP 573
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 248/499 (49%), Gaps = 46/499 (9%)
Query: 57 RKRLRSFASN-SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
++ ++SF S + +I+ L G + Y ++ + N+S F ++I K+ +
Sbjct: 145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVD 204
Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
+A+E F M E C PD Y Y +++ +++ A+ + EM C P+ V +++LI
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264
Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
+GL K G K++D M +G +PN+ TY +I GLC + D+A L +M S C
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
P+ V Y L+NG K RR +A+ LL S E+ G+ YS LI GLF+ + +EA +
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
+RKM E+ +P++V+Y V++ GL GK +A ++L+ M G +P+ Y Y++L+KGF
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
GL ++A + E+ K N +++LI G+C G V +A +++KM G P
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
++++I GLC G ++ A L+++M + P SQ
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPK-----SQ---------------------- 537
Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
PD++TYN L++G C +I+ A+ L + +G PD +T
Sbjct: 538 ------------------PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCN 579
Query: 536 TLINGLQRVDREEDAFRIF 554
T +N L D R F
Sbjct: 580 TFLNTLSEKSNSCDKGRSF 598
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 197/398 (49%), Gaps = 3/398 (0%)
Query: 29 LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
LS V + K + F +RK L + ++ L K D LDE
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 89 LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
++S S ++ VLI G K GD + + M C P+ YN +++ K
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
A+++ MV C+PN VT+ LINGL K + A+++L M +RG N+ Y++
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
+ISGL + +A+EA L+ KM + GC P+ V Y+ L++G C+ + +EA +L G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
+P +YS L+ G F+ +EA +++M + + Y V+I GL G+VK+AM
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD---SLPNTHTFTILI 385
+ S M GI PDT Y+++IKG C +G +D A L E+ ++ S P+ T+ IL+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
G+C + A L N M GC P V N ++ L
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 209/465 (44%), Gaps = 55/465 (11%)
Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
T S +I + SG + K+L + + + ++ +V + + D+A LF +M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 230 KDS----------------------------------------GCSPDFVAYNALLNGFC 249
D SP+ +++N ++ C
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
KLR VD A+ + R + +P +Y L+DGL + +R DEA +M E P V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
+Y V+I GL + G + KL+ +M +G VP+ YN LI G C G LD+A SL +
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
+PN T+ LI G+ + DA +L + ME+ G + +++ LI GL K G+
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 430 EKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
E+A L+ KM E G P + + +V+ C G ++A +IL ++
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVV--------------YSVLVDGLCREGKPNEAKEILNRMI 424
Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
SG LP+ TY+SL+ GF K G A++++KE+ G + Y LI+GL V R +
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
+A ++ +M G P Y S++ C A L+ + L
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 200/411 (48%), Gaps = 25/411 (6%)
Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
I P+ +N +IK C L +D+A + + +R LP+ +T+ L+ G+C+ +D+A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
L ++M+ GC PS ++N LIDGLCK G+L + L M FL+ V
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM--------FLK-----GCV 289
Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
++ + T++ C G + KA +L ++ S +P+ +TY +LING K A++L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
++ +G + Y LI+GL + + E+A ++ +M + GC P+ VY L+ CR
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
K + A + + + + + S+ + F + G E A+Q EMD
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFL 694
Y++ + GLC G+VKEA+ ++S ++ I P V +I GLC G +D A+ ++
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKML---TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 695 YTL-KNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
L + +P V Y LL L KD + A LL M G D D
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISR--AVDLLNSMLDRGCDPDV 575
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
+ VLI G VG ++A+ + KM +PD Y++++ AL +Y+EM+
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 161 ---KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
+ P++VT+++L++GL A+ +L+ M RG P+ T ++ L + +
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
+ + R FL+ L+ K +RV A ++ P+ +++
Sbjct: 590 NSCDKGRSFLE--------------ELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWA 635
Query: 278 CLIDGLFRAKRYDEA 292
++ + + K+ + A
Sbjct: 636 MIVREICKPKKINAA 650
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 243 bits (620), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 234/428 (54%), Gaps = 13/428 (3%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A +++ EM++ +P+IV F+ ++ ++K K ++ I + +M GI + +++TI+I
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ +R A L KM G P V +LLNGFC+ R EA++L+ S + GFVP
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+ Y+ +I+GL + + + A + M ++ I D V Y +I GLS +G+ DA +LL
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
DM +R I P+ + ALI F G L +AR+L E+ +R +PN T+ LI G C +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
G + DA+ +F+ M GCFP V +N LI G CK+ +E LF +M
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---------- 352
Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
QG V D + T++ YC AG ++ A K+ ++ + G PDI+TYN L++ C G
Sbjct: 353 -QG--LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
I AL + ++LQ + D +TY +I GL R D+ ++A+ +F + + G P Y +
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 572 LMTWSCRR 579
+++ CR+
Sbjct: 470 MISGLCRK 477
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 233/456 (51%), Gaps = 15/456 (3%)
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
+ A F +M + P + + VL + + F + + +Y++M L ++ +F++L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
I+ + + +A+ +L +M + G P+ T +++G CQ NR EA L M G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
P+ V YN ++NG CK R ++ AL + EK G +Y+ LI GL + R+ +A
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
R M + KI+P+V+ + +I + G + +A L +M R +VP+ + YN+LI GFC
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
G L A+ + + + P+ T+ LI G C++ V+D KLF +M G
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
+N LI G C+AG+L A +F +M + G +P D + +++ C
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP--------------DIVTYNILLDCLCN 406
Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
G I KA ++ L +S DIITYN +I G C+ + A LF+ L KG++PD++
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
Y T+I+GL R + +A ++ +M ++G PS +Y
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 224/509 (44%), Gaps = 47/509 (9%)
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
D+A+ LF +M S P V + +L K+ + D + L E G L S++ L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
I R R A A KM + P +V G ++ G + + ++A+ L+ M G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
VP+ YN +I G C L+ A + + K+ + T+ LI G+ +G DA +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
L M K P+V F ALID K G L +A L+ +M +R S V
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM---------IRRSV----VP 287
Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
+ + +++ +C G + A + + G PD++TYN+LI GFCK + +KLF
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
E+ +GL D+ TY TLI+G + + A ++F +M G +P Y L+ C
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN- 406
Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
+G+ ++++ +E+ LQK E+ D + Y
Sbjct: 407 -----------------NGKIEKALVMVED-LQKSEM---------------DVDIITYN 433
Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
I + GLC+ ++KEA +F L + + +I GLC++G A + ++
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
GF+ R+ + LR S + + A H
Sbjct: 494 GFMPSERIYDETLRDHYTSLSAELIKAAH 522
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 214/458 (46%), Gaps = 15/458 (3%)
Query: 47 GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
F F + + + S + V++++ K N FD+ ++ + +S F +LI
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
+ + AL GKM + +P + ++LN + F A+++ M +P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
N+V ++ +INGL K+ A+++ M ++GI + TY +ISGL R +A RL
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
M P+ + + AL++ F K + EA L + + VP + +Y+ LI+G
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
+A + M + PDVV Y +I G ++ +V+D MKL +M +G+V D + Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
N LI G+C G L+ A+ + + P+ T+ IL+ +C NG ++ A + ++K
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
+ + +N +I GLC+ +L++A LF + G P D +
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP--------------DAIAYI 468
Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
TM+ C GL +A K+ ++ E G +P Y+ +
Sbjct: 469 TMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 8/271 (2%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
F LI + K G+ +A + +M P+V+ YN+++N A ++ MV
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
C P++VT++ LI G KS + E +K+ EMT +G++ + FTY +I G CQ + +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
A ++F +M D G SPD V YN LL+ C ++++AL ++ +K + +Y+ +I
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
GL R + EA+ +R + + ++PD + Y MI GL G ++A KL M+E G +
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
P Y D L D SL E+ K
Sbjct: 497 PSERIY--------DETLRDHYTSLSAELIK 519
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 157/555 (28%), Positives = 267/555 (48%), Gaps = 15/555 (2%)
Query: 71 SMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQ 130
S + K ++L ++ S ++ ++I+ + + A + GK+ + +
Sbjct: 96 SAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE 155
Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
PD I+N +LN + AL + MV++ P ++T + L+NGL +GK A+ +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
+D M + G PN+ TY V++ +C+ + A L KM++ D V Y+ +++G CK
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
+D A L E GF + +Y+ LI G A R+D+ R M + KI P+VV
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
+ V+I + GK+++A +LL +M +RGI P+T YN+LI GFC L++A + +
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
+ P+ TF ILI G C+ +DD +LF +M G + +N L+ G C++G+LE
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
A LF +M RV D S + +++ C G + KA +I ++ +
Sbjct: 456 VAKKLFQEMV--------------SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
S DI Y +I+G C ++ A LF L LKG++ D+ Y +I+ L R D
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
A +F +M + G P Y L+ + A L + D ++K +
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Query: 610 FLQKGEVENAIQGLL 624
L GE++ + +L
Sbjct: 622 MLSSGELDKSFLDML 636
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 241/503 (47%), Gaps = 14/503 (2%)
Query: 87 DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
D ++S + V D F L S K E L +M+ +Y + ++N R
Sbjct: 78 DMIQSRPLPTVID-FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136
Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
+ A + +++KL P+ V F+ L+NGL + A++++D M + G P T
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITL 196
Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
+++GLC + +A L +M ++G P+ V Y +LN CK + A+ LLR E+
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
YS +IDGL + D A+ + +M + + D++ Y +I G AG+ D
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
KLL DM +R I P+ ++ LI F G L +A L E+ +R PNT T+ LI
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
G C+ +++A ++ + M GC P + FN LI+G CKA ++ LF +M +
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL----- 431
Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
+ + + T+V+ +C +G + A K+ ++ PDI++Y L++G
Sbjct: 432 --------RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
C G + AL++F +++ + D Y +I+G+ + +DA+ +F +P G
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 567 AVYKSLMTWSCRRRKFSLAFSLW 589
Y +++ CR+ S A L+
Sbjct: 544 RAYNIMISELCRKDSLSKADILF 566
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 235/475 (49%), Gaps = 13/475 (2%)
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
+ A++ F M + P V +N + + + + + L LA+ +M +I T S++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
IN + K A + ++ + G P+ + +++GLC R EA L +M + G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
P + N L+NG C +V +A+ L+ + GF P +Y +++ + ++ + A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
RKM E I+ D V Y ++I GL + G + +A L ++M +G D YN LI GFC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
+ G D L ++ KR PN TF++LI + G + +A +L +M + G P+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
+N+LIDG CK LE+A + + L +S+G + D + ++ YC A
Sbjct: 370 TYNSLIDGFCKENRLEEAIQM-----------VDLMISKGCD--PDIMTFNILINGYCKA 416
Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
I ++ +++ G + + +TYN+L+ GFC+ G + A KLF+E+ + +RPD V+Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
L++GL E A IFG++ ++ +Y ++ C K A+ L+
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/564 (25%), Positives = 258/564 (45%), Gaps = 22/564 (3%)
Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
K + A+ + +M Q LP + + S + + + + L +M+ G + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
++N FC+ R++ A + + K G+ P ++ L++GL R EA +M E
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
+P ++ ++ GL GKV DA+ L+ M E G P+ Y ++ C G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
L ++ +R+ + ++I+I G+C++G +D+A LFN+ME G + +N LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 423 LCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
C AG + L M +I N F +++ + G + +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTF----------------SVLIDSFVKEGKLRE 351
Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
A ++L ++ + G P+ ITYNSLI+GFCK + A+++ + KG PD +T+ LIN
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
G + +R +D +F +M G + Y +L+ C+ K +A L+ + +
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 600 DDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
D S K + + L GE+E A++ +++ + + Y I + G+C +V +A ++F
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
L + + +I LC++ L A +F + G N L+R+ L
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHL-- 589
Query: 719 KDNKKVHAYHLLCRMKSVGYDLDA 742
D+ A L+ MKS G+ D
Sbjct: 590 GDDDATTAAELIEEMKSSGFPADV 613
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 182/401 (45%), Gaps = 36/401 (8%)
Query: 69 VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
V++++ K L + L ++ N+ + + + ++I G K G + A F +M+
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
+ D+ YN ++ + + +M+K PN+VTFS+LI+ K GK A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF---------- 238
++L EM QRGI PN TY +I G C+ NR +EA ++ M GC PD
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 239 -------------------------VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
V YN L+ GFC+ +++ A L + P +
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
SY L+DGL ++A + K+ + K+E D+ +Y ++I G+ A KV DA L
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
+ +G+ D YN +I C L +A L ++ + P+ T+ ILI +
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
A +L +M+ +G FP+ ++ + +GEL+K+ L
Sbjct: 594 ATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGELDKSFL 633
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 178/683 (26%), Positives = 309/683 (45%), Gaps = 102/683 (14%)
Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
P Y +N ++ A ++ EM + C PN TF +L+ G K+G T+ +++
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA---------- 240
L+ M G+LPNK Y ++S C+ R D++ ++ KM++ G PD V
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 241 -----------------------------YNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
YN +L GFCK+ +++A L S ++ +
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
L SY+ + GL R ++ EA ++M ++ I P + Y +++ GL + G + DA ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
M+ G+ PD Y L+ G+C +G +D A+SL E+ + + LPN +T IL+ + +
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
G + +A++L KM + G N ++DGLC +GEL+KA +EI K
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA------IEIVK-------- 490
Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
G RVH A+L + Y GL+ + L E+ LPD+ITY++L+NG CK G
Sbjct: 491 ---GMRVHGSAALGNLGNSY--IGLVDDS------LIENNCLPDLITYSTLLNGLCKAGR 539
Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
A LF E+ + L+PDSV Y I+ + + AFR+ M + GC S Y S
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 572 L-MTWSCRRRKFSL-----------------AFSLWLQYLRDISGRDDESMKSIEEFLQK 613
L + + + F + ++ +QYL + +D + ++E +QK
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED-ATNLLDEMMQK 658
Query: 614 GEVEN--AIQGLLEMDFKLNDFQLAP----------------YTIWLIGLCQDGQVKEAL 655
N + + L+E K+ DF +A Y++ L GQ+ +A
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718
Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
+ +++ + L+ LCK+ L++A + + G+ P ++ L
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Query: 716 LFSKDNKKVHAY-HLLCRMKSVG 737
+ K+ +++ + M SVG
Sbjct: 779 GKMGNKKEANSFADKMMEMASVG 801
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 269/582 (46%), Gaps = 58/582 (9%)
Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
P++ ++LL+ K + E + +M GI P +T+ ++I LC + D A L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
F +M + GC P+ + L+ G+CK D+ L LL + E G +P Y+ ++ R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV----P 341
R D++ KM EE + PD+V + I L + GKV DA ++ SDM + P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
++ YN ++KGFC +GLL+ A++L I + D L + ++ I + G+ R+G +A+ +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQG---- 454
+M G PS+ +N L+DGLCK G L A + M+ + + + L G
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 455 GNRVHDKASLQTMVEQYC---------------TAGLIHKAYKILMQLAESGNLPDIITY 499
G K+ LQ M+ C G I +A ++L ++ E G D +T
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLR-----------------------PDSVTYGT 536
N +++G C G ++ A+++ K +++ G PD +TY T
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
L+NGL + R +A +F +M P Y + C++ K S AF + L+D+
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF----RVLKDM 585
Query: 597 SGRD-DESMKSIEEFLQKGEVEN---AIQGLL-EMDFKLNDFQLAPYTIWLIGLCQDGQV 651
+ +S+++ + ++N I GL+ EM K + Y + LC+ +V
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
++A N+ +++ S LI CK D+A +VF
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/589 (28%), Positives = 285/589 (48%), Gaps = 36/589 (6%)
Query: 87 DELRSGNVSVVSD----VFFVLISG--YYKVGDCEKALESFGKMKEFD-----CQP---- 131
+ LRSG V + +D +F +I V D + + K K++D C+
Sbjct: 58 ERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 117
Query: 132 ----DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
++Y + ++N R + LA + +++KL PN +TFS LINGL G+ A
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
++++D M + G P+ T +++GLC + EA L KM + GC P+ V Y +LN
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
CK + A+ LLR E+ YS +IDGL + D A+ + +M + I +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
++ Y ++I G AG+ D KLL DM +R I P+ ++ LI F G L +A L
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
E+ R P+T T+T LI G C+ +D A ++ + M GC P++ FN LI+G CKA
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
++ LF KM + V D + T+++ +C G ++ A ++ ++
Sbjct: 418 RIDDGLELFRKMSL-------------RGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
P+I+TY L++G C G AL++F++++ + D Y +I+G+ +
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
+DA+ +F +P G P Y ++ C++ S A L+ + D D +
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI-WLIGLCQDGQVKEA 654
I L G+ +++ L+E + K F + TI +I + DG++K++
Sbjct: 585 IRAHLGDGDATKSVK-LIE-ELKRCGFSVDASTIKMVIDMLSDGRLKKS 631
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 170/600 (28%), Positives = 282/600 (47%), Gaps = 67/600 (11%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+ ++ +M+ LP ++ FS L + ++K+ + ++ + + +M +GI N +T +I+I+
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ + A+ K+ G P+ + ++ L+NG C RV EAL L+ + G P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
L + + L++GL + + EA KM E +P+ V YG ++ + ++G+ AM+LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
M ER I D Y+ +I G C G LD A +L E+ + N T+ ILI G C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
G DD KL M K P+V F+ LID K G+L +A L +M G P
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP----- 366
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
D + ++++ +C + KA +++ + G P+I T+N LING+CK
Sbjct: 367 ---------DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
I+ L+LF+++ L+G+ D+VTY TLI G + + A +F +M P+ YK
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
L+ C + ES K++E F E + +E+D +
Sbjct: 478 ILLDGLCD---------------------NGESEKALEIF------EKIEKSKMELDIGI 510
Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--------LIHGLCK 682
Y I + G+C +V +A ++F L P VK +I GLCK
Sbjct: 511 -------YNIIIHGMCNASKVDDAWDLFCSL--------PLKGVKPGVKTYNIMIGGLCK 555
Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
+G L A +F ++G N L+R+ L D K + L+ +K G+ +DA
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK--SVKLIEELKRCGFSVDA 613
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 175/366 (47%), Gaps = 1/366 (0%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
S +I L K D + +E+ ++ + +LI G+ G + + M +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
P+V ++ +++ ++ A ++ EM+ P+ +T++ LI+G K +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A +M+D M +G PN T+ I+I+G C+ NR D+ LF KM G D V YN L+
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
GFC+L +++ A L + P + +Y L+DGL ++A + K+ + K+E
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
D+ +Y ++I G+ A KV DA L + +G+ P YN +I G C G L +A L
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
++ + P+ T+ ILI +G + KL ++++ G +ID L
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SD 625
Query: 427 GELEKA 432
G L+K+
Sbjct: 626 GRLKKS 631
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 155/370 (41%), Gaps = 58/370 (15%)
Query: 390 RNGMVD----DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
R+G+VD DA LF M + P+V F+ L + K + + L +ME+
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK--- 117
Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
H+ +L M+ +C + A+ + ++ + G P+ IT+++LING
Sbjct: 118 ----------GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
C G ++ AL+L + G +PD +T TL+NGL +E +A + +M + GC P+
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
Y ++ C+ + +LA E L+K E E
Sbjct: 228 AVTYGPVLNVMCKSGQTALAM----------------------ELLRKME---------E 256
Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK-LIHGLCKRG 684
+ KL+ + Y+I + GLC+ G + A N+F+ + E K I T LI G C G
Sbjct: 257 RNIKLDAVK---YSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAG 312
Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
D + +K + P V + + F K+ K A L M G D
Sbjct: 313 RWDDGAKLLRDMIKRK--INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 745 YPKTKSLLPG 754
Y SL+ G
Sbjct: 371 YT---SLIDG 377
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 255/527 (48%), Gaps = 18/527 (3%)
Query: 48 FRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
F+ + R RL F S + S++ + +DL ++ ++ ++I+
Sbjct: 60 FQEMTRSRPRPRLIDF---SRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
+ A + GK+ + +PD ++ ++N + AL + MV++ P
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
++T + L+NGL +GK A+ ++D M + G PN+ TY V+ +C+ + A L
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
KM++ D V Y+ +++G CK +D A L E GF + Y+ LI G A
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
R+D+ R M + KI PDVV + +I + GK+++A +L +M +RGI PDT Y
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
+LI GFC LD+A + + + PN TF ILI G C+ ++DD +LF KM
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQT 466
G +N LI G C+ G+LE A LF +M RV D S +
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMV--------------SRRVRPDIVSYKI 462
Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
+++ C G KA +I ++ +S DI YN +I+G C ++ A LF L LKG
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
++PD TY +I GL + +A +F +M ++G +P+ Y L+
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 239/476 (50%), Gaps = 15/476 (3%)
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
+ A++ F +M +P + ++ + ++ R + + L L + +M N+ T S++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
IN + K +A + ++ + G P+ T++ +I+GLC R EA L +M + G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
P + NAL+NG C +V +A+ L+ + GF P +Y ++ + ++ + A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
RKM E KI+ D V Y ++I GL + G + +A L ++M +G D Y LI+GFC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
G D L ++ KR P+ F+ LI + G + +A++L +M + G P
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG-GNRVHDKASLQTMVEQYCT 473
+ +LIDG CK +L+KAN + L L +S+G G + + ++ YC
Sbjct: 354 TYTSLIDGFCKENQLDKANHM-----------LDLMVSKGCGPNIR---TFNILINGYCK 399
Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
A LI ++ +++ G + D +TYN+LI GFC++G + A +LF+E+ + +RPD V+
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
Y L++GL E A IF ++ ++ +Y ++ C K A+ L+
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Score = 182 bits (462), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 147/571 (25%), Positives = 260/571 (45%), Gaps = 36/571 (6%)
Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
K + A+ + EMT+ P ++ + S + + + D L +M+ G + + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
++N C+ R++ A + + K G+ P ++S LI+GL R EA +M E
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
+P ++ ++ GL GKV DA+ L+ M E G P+ Y ++K C G A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
L ++ +R + ++I+I G+C++G +D+A LFN+ME G + ++ LI G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
C AG + L M I + T D + +++ + G + +A +
Sbjct: 292 FCYAGRWDDGAKLLRDM-IKRKIT------------PDVVAFSALIDCFVKEGKLREAEE 338
Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
+ ++ + G PD +TY SLI+GFCK ++ A + + KG P+ T+ LING
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
+ + +D +F +M G Y +L+ C K +A L+ + + D
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 603 SMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
S K + + L GE E A++ +++ + + Y I + G+C +V +A ++F L
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 662 VECKAIVTPPSCVK--------LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--L 711
P VK +I GLCK+G L A +F ++G P C Y L
Sbjct: 519 --------PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH--SPNGCTYNIL 568
Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
+R+ L D K + L+ +K G+ +DA
Sbjct: 569 IRAHLGEGDATK--SAKLIEEIKRCGFSVDA 597
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 191/418 (45%), Gaps = 10/418 (2%)
Query: 17 PIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKP 76
P E P+L + K+ T++ M+ +RK S +I L K
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAME---------LLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 77 NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
D + +E+ ++ LI G+ G + + M + PDV +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
+A+++ ++ A ++ EM++ P+ VT++ LI+G K + + A MLD M
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
+G PN T+ I+I+G C+ N D+ LF KM G D V YN L+ GFC+L +++
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
A L + P + SY L+DGL ++A + K+ + K+E D+ +Y ++I
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
G+ A KV DA L + +G+ PD YN +I G C G L +A L ++ + P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
N T+ ILI G + KL ++++ G ++D L G L+K+ L
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSFL 617
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 239 bits (611), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 173/684 (25%), Positives = 304/684 (44%), Gaps = 50/684 (7%)
Query: 62 SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
+F++ + +I N D+ +++ +F LI G+ K G + AL
Sbjct: 167 AFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL 226
Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
+MK D+ +YN ++ + +A ++E+ P+ VT++ +I L K+
Sbjct: 227 DEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKA 286
Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
+ + A++M + + + +P + Y +I G + DEAY L + + G P +AY
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346
Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
N +L K+ +VDEAL + +KD P L +Y+ LID L RA + D A+ M +
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
+ P+V +M+ L ++ K+ +A + +M + PD + +LI G +G +D
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
A + ++ D N+ +T LI +G +D K++ M C P + + N +D
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
+ KAGE EK +F +++ + V D S ++ AG ++ Y
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARR-------------FVPDARSYSILIHGLIKAGFANETY 572
Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
++ + E G + D YN +I+GFCK G +N A +L +E++ KG P VTYG++I+GL
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
++DR ++A+ +F + + +Y SL+ + GR D
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK------------------VGRID 674
Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
E+ +EE +QKG N L + L L + ++ EAL F +
Sbjct: 675 EAYLILEELMQKGLTPN----------------LYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
E K + LI+GLCK + A + K G ++P +Y +K
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG--MKPSTISYTTMISGLAKAG 776
Query: 722 KKVHAYHLLCRMKSVGYDLDACLY 745
A L R K+ G D+ Y
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACY 800
Score = 223 bits (567), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 169/686 (24%), Positives = 310/686 (45%), Gaps = 87/686 (12%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+ +I K D LDE++S ++ ++ V I + KVG + A + F +++
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
+PD Y +++ + + A+ ++ + K +P ++ +I G +GK +
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A +L+ +G +P+ Y +++ L ++ + DEA ++F +MK +P+ YN L++
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILID 385
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
C+ ++D A L S +K G P + + + ++D L ++++ DEA A + +M + P
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF------------- 353
D + + +I GL + G+V DA K+ M + ++ Y +LIK F
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 354 -------C--DLGLL-------------DQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
C DL LL ++ R++ EI R +P+ +++ILI G+ +
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
G ++ +LF M++ GC +N +IDG CK G++ KA L +M+ G PT+
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLINGFCKV 509
G+ + A + + E Y +L + A+S + +++ Y+SLI+GF KV
Sbjct: 626 ----GSVIDGLAKIDRLDEAY-----------MLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
G I+ A + +EL KGL P+ T+ +L++ L + + +A F M + CTP+ Y
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
L+ C+ RKF+ AF W +E ++G + I
Sbjct: 731 GILINGLCKVRKFNKAFVFW------------------QEMQKQGMKPSTIS-------- 764
Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
YT + GL + G + EA +F + +I GL A
Sbjct: 765 --------YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816
Query: 690 MDVFLYTLKNGFILRPRVCNYLLRSL 715
+F T + G + + C LL +L
Sbjct: 817 FSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/567 (25%), Positives = 275/567 (48%), Gaps = 16/567 (2%)
Query: 29 LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
++ T++ V+ K F K +R+ + + +I FD + L+
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 89 LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
R+ + +++ K+G ++AL+ F +MK+ D P++ YN ++++ R
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGK 392
Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
A + M K PN+ T +++++ L KS K + A M +EM + P++ T+
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
+I GL ++ R D+AY+++ KM DS C + + Y +L+ F R ++ + +
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
P L + +D +F+A ++ A + ++ + PD Y ++I GL +AG +
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
+L M+E+G V DT YN +I GFC G +++A L E+ + P T+ +I G+
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTL 447
+ +D+A LF + + +V ++++LIDG K G +++A L+ + M+ G P L
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
+ + ++++ A I++A + E P+ +TY LING C
Sbjct: 693 Y--------------TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
KV N A ++E+Q +G++P +++Y T+I+GL + +A +F + NG P A
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLR 594
Y +++ + AFSL+ + R
Sbjct: 799 CYNAMIEGLSNGNRAMDAFSLFEETRR 825
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 246/557 (44%), Gaps = 50/557 (8%)
Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
++L EM+ G P+ T ++ G + N+ E Y + M+ P F AY L+ F
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178
Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
+ D L L + ++ G+ P + ++ LI G + R D A + +M ++ D+
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
VLY V I + GKV A K ++ G+ PD Y ++I C LD+A +
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
+ K +P T+ + +I G G D+A L + G PSV +N ++ L K G+
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
+++A +F +M+ P L ++ +++ C AG + A+++ +
Sbjct: 359 VDEALKVFEEMKKDAAPNL--------------STYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
++G P++ T N +++ CK ++ A +F+E+ K PD +T+ +LI+GL +V R +
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
DA++++ +M + C + VY SL I+
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSL----------------------------------IK 490
Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
F G E+ + +M + L ++ + + G+ ++ +F + + +
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
S LIHGL K G+ + ++F + G +L R N ++ F K K AY
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG--FCKCGKVNKAYQ 608
Query: 729 LLCRMKSVGYDLDACLY 745
LL MK+ G++ Y
Sbjct: 609 LLEEMKTKGFEPTVVTY 625
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 158/648 (24%), Positives = 283/648 (43%), Gaps = 58/648 (8%)
Query: 110 KVGDCEKALESF---GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
++ D +A+E F + E P+ Y N++L + R + F + EM P
Sbjct: 74 RLKDVNRAIEYFRWYERRTELPHCPESY--NSLLLVMARCRNFDALDQILGEMSVAGFGP 131
Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
++ T ++ G K+ K ++ M + P YT +I +N +D LF
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
+M++ G P + L+ GF K RVD AL+LL + + Y+ ID +
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
+ D A+ ++ ++ ++PD V Y MI L +A ++ +A+++ + + VP TY Y
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
N +I G+ G D+A SL + S+P+ + ++ + + G VD+A K+F +M+K
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
P++ +N LID LC+AG+L+ A L M+ LF + ++
Sbjct: 372 DAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQ---KAGLFPNVR----------TVNI 417
Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
MV++ C + + +A + ++ PD IT+ SLI+G KVG ++ A K+++++
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
R +S+ Y +LI R+ED +I+ M C+P + + M +
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK-------- 529
Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
+G ++ EE + V +A Y+I + GL
Sbjct: 530 ----------AGEPEKGRAMFEEIKARRFVPDA----------------RSYSILIHGLI 563
Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
+ G E +F + E ++ + +I G CK G ++ A + GF P
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF--EPT 621
Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
V Y +K ++ AY L KS +L+ +Y SL+ G
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY---SSLIDG 666
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 164/327 (50%)
Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
+K G+ EK F ++K PD Y+ +++ + ++Y M + C+ +
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
++++I+G K GK A ++L+EM +G P TY VI GL +I+R DEAY LF +
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
K + V Y++L++GF K+ R+DEA +L + G P L +++ L+D L +A+
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
+EA ++ M E K P+ V YG++I GL + K A +M+++G+ P T Y
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
+I G G + +A +L +P++ + +I G+ DA LF + + G
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Query: 409 CFPSVGMFNALIDGLCKAGELEKANLL 435
L+D L K LE+A ++
Sbjct: 828 LPIHNKTCVVLLDTLHKNDCLEQAAIV 854
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%)
Query: 68 AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
+VI L K + D + +E +S + + ++ LI G+ KVG ++A ++ +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
P++Y +N++L+ + + AL + M +L C PN VT+ +LINGL K K A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
EM ++G+ P+ +YT +ISGL + EA LF + K +G PD YNA++ G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
R +A +L + G + L+D L + ++A
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 226/439 (51%), Gaps = 16/439 (3%)
Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
LI G++ + + KA+ +++F QPDV+ YNA++N + A V M +
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
P+ VT++++I L GK ++A+K+L+++ P TYTI+I DEA
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
+L +M G PD YN ++ G CK VD A ++R+ E G P + SY+ L+ L
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
+++E KMF EK +P+VV Y ++I L GK+++AM LL M+E+G+ PD
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
Y Y+ LI FC G LD A + LP+ + ++ +C+NG D A ++F K
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
+ + GC P+ +N + L +G+ +A +++ M G +P D+
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP--------------DEI 474
Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
+ +M+ C G++ +A+++L+ + P ++TYN ++ GFCK I A+ + + +
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 523 QLKGLRPDSVTYGTLINGL 541
G RP+ TY LI G+
Sbjct: 535 VGNGCRPNETTYTVLIEGI 553
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 202/409 (49%), Gaps = 15/409 (3%)
Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
P++ ++ LING K + + A ++LD M + P+ TY I+I LC + D A ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
++ C P + Y L+ VDEAL L+ G P + +Y+ +I G+ +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
D A+ R + + EPDV+ Y +++R L GK ++ KL++ M P+
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
Y+ LI C G +++A +L + ++ P+ +++ LI CR G +D A + M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
GC P + +N ++ LCK G+ ++A +F K+ E+G +P + +S
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP--------------NSSSY 441
Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
TM ++G +A +++++ +G PD ITYNS+I+ C+ G ++ A +L +++
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
P VTY ++ G + R EDA + M NGC P+ Y L+
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 212/444 (47%), Gaps = 14/444 (3%)
Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
R ++ +L + MV+ P+++ + LI G A+++++ + + G P+ F
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
Y +I+G C++NR D+A R+ +M+ SPD V YN ++ C ++D AL +L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
D P + +Y+ LI+ DEA +M ++PD+ Y +IRG+ + G V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
A +++ ++ +G PD YN L++ + G ++ L +++ PN T++IL
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
I +CR+G +++A L M++ G P ++ LI C+ G L+ A M
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM----- 394
Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
+S G + D + T++ C G +A +I +L E G P+ +YN++ +
Sbjct: 395 ------ISDGC--LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
G+ AL + E+ G+ PD +TY ++I+ L R ++AF + M P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 565 SPAVYKSLMTWSCRRRKFSLAFSL 588
S Y ++ C+ + A ++
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINV 530
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 228/483 (47%), Gaps = 21/483 (4%)
Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
C+ E+ L M G +PD + L+ GF LR + +A+ ++ EK G P +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
+Y+ LI+G + R D+A +M + PD V Y +MI L GK+ A+K+L+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
+ P Y LI+ G +D+A L E+ R P+ T+ +I GMC+ GM
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLS 452
VD A ++ +E GC P V +N L+ L G+ E+ L KM K +P +
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV----- 333
Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
+ ++ C G I +A +L + E G PD +Y+ LI FC+ G +
Sbjct: 334 ---------VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
+ A++ + + G PD V Y T++ L + + + A IFG++ + GC+P+ + Y ++
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 573 MT--WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFK 629
+ WS + A + L+ + + D+ + S I ++G V+ A + L++M
Sbjct: 445 FSALWSSGDK--IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
+ Y I L+G C+ ++++A+N+ +V + LI G+ GY A
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Query: 690 MDV 692
M++
Sbjct: 563 MEL 565
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 187/375 (49%), Gaps = 4/375 (1%)
Query: 57 RKRLRSFASNSA----VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
R R + F+ ++ +I L DL + L++L S N + +LI G
Sbjct: 183 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
++AL+ +M +PD++ YN ++ ++ + A + + C P++++++
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
+L+ L GK E K++ +M PN TY+I+I+ LC+ + +EA L MK+
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
G +PD +Y+ L+ FC+ R+D A+ L + DG +P + +Y+ ++ L + + D+A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
+ K+ E P+ Y M L +G A+ ++ +M GI PD YN++I
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
C G++D+A L V++ + P+ T+ I++ G C+ ++DA + M GC P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542
Query: 413 VGMFNALIDGLCKAG 427
+ LI+G+ AG
Sbjct: 543 ETTYTVLIEGIGFAG 557
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 179/372 (48%), Gaps = 5/372 (1%)
Query: 63 FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
FA N A+I+ K N D + LD +RS + S + + ++I G + AL+
Sbjct: 159 FAYN-ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
++ +CQP V Y ++ + AL + EM+ P++ T++ +I G+ K G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
+ A +M+ + +G P+ +Y I++ L + +E +L KM C P+ V Y+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
L+ C+ +++EA+ LL+ ++ G P SY LI R R D A + M +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
PD+V Y ++ L + GK A+++ + E G P++ YN + G D+
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG--DKI 455
Query: 363 RSLQ--VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
R+L +E+ P+ T+ +I +CR GMVD+A +L M PSV +N ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 421 DGLCKAGELEKA 432
G CKA +E A
Sbjct: 516 LGFCKAHRIEDA 527
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 158/338 (46%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+ +I + G D + +DE+ S + + +I G K G ++A E ++
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
C+PDV YN +L + + + +M C PN+VT+S+LI L + GK E
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A+ +L M ++G+ P+ ++Y +I+ C+ R D A M GC PD V YN +L
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
CK + D+AL + + G P SY+ + L+ + A +M I+P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
D + Y MI L G V +A +LL DMR P YN ++ GFC ++ A ++
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
+ PN T+T+LI G+ G +A +L N +
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 199/465 (42%), Gaps = 58/465 (12%)
Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
R+ Y E+ M + PDV+L +I+G + A++++ + + G PD +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
YNALI GFC + +D A + + +D P+T T+ I+I +C G +D A K+ N++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
C P+V + LI+
Sbjct: 220 LSDNCQPTVITYTILIEA------------------------------------------ 237
Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
TM+E G + +A K++ ++ G PD+ TYN++I G CK G ++ A ++ + L+L
Sbjct: 238 -TMLE-----GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
KG PD ++Y L+ L + E+ ++ +M C P+ Y L+T CR K
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 585 AFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM--DFKLNDFQLAPYTI 640
A +L L+ +++ D I F ++G ++ AI+ L M D L D + Y
Sbjct: 352 AMNL-LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD--IVNYNT 408
Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
L LC++G+ +AL IF L E S + L G A+ + L + NG
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
+ P Y ++ A+ LL M+S + Y
Sbjct: 469 --IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 187/723 (25%), Positives = 308/723 (42%), Gaps = 108/723 (14%)
Query: 37 VIMKTKNPQVGFRFFIWAAKRKRLRSFASN---SAVISMLLKPNGFDLYWQTLDELRSGN 93
V + ++ ++G + F W + K+ F++ S+ + +L + F+ L LR+ N
Sbjct: 70 VFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNEN 129
Query: 94 VSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLA 152
V + + ++ Y + G KA+E + + E +D PDV N++L++ + + A
Sbjct: 130 VKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDA 189
Query: 153 LAVYYEMV----------------------------KL-------NCLPNIVTFSLLING 177
VY EM KL C+PNIV ++ +I G
Sbjct: 190 RKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGG 249
Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG---- 233
K G E A + E+ +G +P T+ +I+G C+ + RL ++K+ G
Sbjct: 250 YCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVS 309
Query: 234 -------------------------------CSPDFVAYNALLNGFCKLRRVDEALALLR 262
C PD YN L+N CK + + A+ L
Sbjct: 310 VWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLD 369
Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
K G +P SY+ LI ++K YD A +M E +PD+V YG++I GL +G
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429
Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
+ DA+ + + +RG+ PD YN L+ G C G A+ L E+ R+ LP+ + +
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
LI G R+G D+A+K+F+ + G V NA+I G C++G L++A +M
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM--- 546
Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
+ V DK + T+++ Y + A KI + ++ P+++TY SL
Sbjct: 547 ----------NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSL 596
Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE-EDAFRIFGQMPQNG 561
INGFC G+ A + FKE+QL+ L P+ VTY TLI L + E A + M N
Sbjct: 597 INGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNK 656
Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
C P+ + L+ ++ + L + G + EF + + +
Sbjct: 657 CVPNEVTFNCLLQGFVKKTSGKV--------LAEPDGSNHGQSSLFSEFFHRMKSDGWSD 708
Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
A Y L+ LC G VK A +V+ P S ++HG C
Sbjct: 709 ------------HAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Query: 682 KRG 684
G
Sbjct: 757 VVG 759
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 205/446 (45%), Gaps = 39/446 (8%)
Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
+I Y+ G ES G + DC+PDV YN ++N ++ +A+ E K
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375
Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
+PN ++++ LI KS + ++A K+L +M +RG P+ TY I+I GL D+A
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435
Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
+ +K+ D G SPD YN L++G CK R A L +P Y+ LIDG
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
R+ +DEA + E+ ++ DVV + MI+G +G + +A+ ++ M E +VPD
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
+ Y+ +I G+ + A + + K PN T+T LI G C G A++ F +
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 404 MEKAGCFPSVGMFNALIDGLCK-AGELEKA-------------------NLL---FYKME 440
M+ P+V + LI L K + LEKA N L F K
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKT 675
Query: 441 IGK---NP------------TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
GK P F R+ G H A+ + + C G++ A
Sbjct: 676 SGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDH-AAAYNSALVCLCVHGMVKTACMFQD 734
Query: 486 QLAESGNLPDIITYNSLINGFCKVGN 511
++ + G PD +++ ++++GFC VGN
Sbjct: 735 KMVKKGFSPDPVSFAAILHGFCVVGN 760
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 192/428 (44%), Gaps = 25/428 (5%)
Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
PDV+ ++ L ++ ++ DA K+ +M +RG D Y L+KG C+ G ++ R L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
W + +PN + +I G C+ G +++A +F +++ G P++ F +I+G CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 426 AGELEKANLLF----------------------YKMEIGKNPTLFLRLSQGGNRVHDKAS 463
G+ ++ L Y+ +P + + D A+
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
++ + C G A L + ++ G +P+ ++Y LI +CK + A KL ++
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
+G +PD VTYG LI+GL +DA + ++ G +P A+Y LM+ C+ +F
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 584 LAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
A L+ + L R+I I+ F++ G+ + A + K + + +
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
G C+ G + EAL + + E + + +I G K+ + A+ +F Y KN
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK-- 585
Query: 703 LRPRVCNY 710
+P V Y
Sbjct: 586 CKPNVVTY 593
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 161/398 (40%), Gaps = 51/398 (12%)
Query: 19 EPALEPLLPF-LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
E + + L+P LS + K+K + + + A+R + +I L+
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429
Query: 78 GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
D +L VS + ++ +L+SG K G A F +M + + PD Y+Y
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
+++ R F A V+ V+ ++V + +I G +SG + A+ ++ M +
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
++P+KFTY+ +I G + A ++F M+ + C P+ V Y +L+NGFC A
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609
Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFR-AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
+ + VP + +Y+ LI L + + ++A ++ M K P+ V + +++
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 317 G-------------------------------------------------LSEAGKVKDA 327
G L G VK A
Sbjct: 670 GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA 729
Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
M ++G PD + A++ GFC +G Q R++
Sbjct: 730 CMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 236 bits (603), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 226/422 (53%), Gaps = 13/422 (3%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
+L +++ MV+ LP+I FS L++ +SK K +V I + ++M GI N T I+++
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ ++ A KM G P V + +LLNGFC+ RV +AL + G+ P
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+ Y+ +IDGL ++K+ D A +M ++ I PDVV Y +I GL +G+ DA +++
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
S M +R I PD + +NALI G + +A E+ +R P+ T+++LI G+C
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
+D+A+++F M GCFP V ++ LI+G CK+ ++E LF +M
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM------------ 352
Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
SQ G V + + +++ YC AG ++ A +I ++ G P+IITYN L++G C G
Sbjct: 353 SQRG-VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
I AL + ++Q G+ D VTY +I G+ + DA+ I+ + G P Y +
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 572 LM 573
+M
Sbjct: 472 MM 473
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 219/451 (48%), Gaps = 36/451 (7%)
Query: 99 DVFFVLISG--YYKVGDCEKALESFGKMKEFDCQPDVYIY-----------------NAV 139
D+FF ++ + D + L + KMK++D V IY N +
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYD----VVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
LN R LAL+ +M+KL P+IVTF L+NG + + A+ M D+M G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
PN Y +I GLC+ + D A L +M+ G PD V YN+L++G C R +A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
++ K P + +++ LID + R EA +Y +M ++PD+V Y ++I GL
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
++ +A ++ M +G PD Y+ LI G+C ++ L E+ +R + NT
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
T+TILI G CR G ++ A+++F +M G P++ +N L+ GLC G++EKA ++ M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
Q D + ++ C AG + A+ I L G +PDI TY
Sbjct: 423 -------------QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPD 530
+++ G K G A LF++++ G+ P+
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 210/492 (42%), Gaps = 51/492 (10%)
Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
+ D++ LF M P ++ LL+ K+++ D + L + G L + +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
L++ R + A ++ KM + EP +V +G ++ G +V DA+ + M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
G P+ YN +I G C +D A L + K P+ T+ LI G+C +G DA
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
++ + M K +P V FNALID K G + +A + +M +R S
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM---------IRRSLD--- 288
Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
D + ++ C + +A ++ + G PD++TY+ LING+CK + +K
Sbjct: 289 -PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
LF E+ +G+ ++VTY LI G R + A IF +M G P+ Y L+ C
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
G++E A+ L +M D +
Sbjct: 408 ----------------------------------DNGKIEKALVILADMQKNGMDADIVT 433
Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP-SCVKLIHGLCKRGYLDLAMDVFLYT 696
Y I + G+C+ G+V +A +I+ L C+ ++ + ++ GL K+G L D
Sbjct: 434 YNIIIRGMCKAGEVADAWDIYCSL-NCQGLMPDIWTYTTMMLGLYKKG-LRREADALFRK 491
Query: 697 LKNGFILRPRVC 708
+K IL P C
Sbjct: 492 MKEDGIL-PNEC 502
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 212/516 (41%), Gaps = 79/516 (15%)
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
GFC RR + R ++G R + D++ + M + + P
Sbjct: 35 GFCFSRRAYSNGSDYREMLRNGI---------------RFMKLDDSLDLFFHMVQCRPLP 79
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
+ + ++ +S+ K + L M+ GI + N L+ FC L A S
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
++ K P+ TF L+ G CR V DA +F++M G P+V ++N +IDGLCK+
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
+++ A L +ME G P D + +++ C++G A +++
Sbjct: 200 KQVDNALDLLNRMEKDGIGP--------------DVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
+ + PD+ T+N+LI+ K G ++ A + ++E+ + L PD VTY LI GL
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
R ++A +FG M GC P Y L+ C+ +K + MK
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV------------------EHGMK 347
Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
E Q+G V N + YTI + G C+ G++ A IF +V C
Sbjct: 348 LFCEMSQRGVVRNTV----------------TYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
+ L+HGLC G ++ A+ + KNG N ++R + K +
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM--CKAGEVAD 449
Query: 726 AYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREM 761
A+ + C + G L+P W M
Sbjct: 450 AWDIYCSLNCQG-------------LMPDIWTYTTM 472
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 154/311 (49%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+ +I L K D L+ + + + LISG G A M +
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
+ PDV+ +NA+++ ++ A Y EM++ + P+IVT+SLLI GL + +
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A +M M +G P+ TY+I+I+G C+ + + +LF +M G + V Y L+
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
G+C+ +++ A + R G P + +Y+ L+ GL + ++A M + ++
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
D+V Y ++IRG+ +AG+V DA + + +G++PD + Y ++ G GL +A +L
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 367 VEIWKRDSLPN 377
++ + LPN
Sbjct: 490 RKMKEDGILPN 500
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 40 KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
K+K + G + F ++R +R+ + + +I + ++ + + V
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ VL+ G G EKAL M++ D+ YN ++ + A +Y
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY--- 454
Query: 160 VKLNC---LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
LNC +P+I T++ ++ GL K G A + +M + GILPN+
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 276/594 (46%), Gaps = 65/594 (10%)
Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
G ++A + KM+EF + Y YN ++++ + + A+ VY M+ P++ T+
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
S L+ GL K + + +L EM G+ PN +T+TI I L + + +EAY + +M D
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
GC PD V Y L++ C R++D A + + P +Y L+D + D
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
++ +M ++ PDVV + +++ L +AG +A L MR++GI+P+ + YN LI
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
G + LD A L + P +T+ + I ++G A + F KM+ G P
Sbjct: 407 GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 466
Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
++ NA + L KAG +A +FY + +IG P D + M++
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP--------------DSVTYNMMMKC 512
Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
Y G I +A K+L ++ E+G PD+I NSLIN K ++ A K+F ++ L+P
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
VTY TL+ GL + + ++A +F M Q GC P+ + +L C+ + +LA
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA----- 627
Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLC 646
L+M FK+ D P Y + GL
Sbjct: 628 ---------------------------------LKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 647 QDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKRGYLDLAMDV---FLY 695
++GQVKEA+ F + K +V P + L+ G+ K ++ A + FLY
Sbjct: 655 KNGQVKEAMCFFH---QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 191/708 (26%), Positives = 315/708 (44%), Gaps = 93/708 (13%)
Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY-EMVKLNCLPNIVTF 171
DC K E F KMK +PD Y +L+ F L ++ ++ EM K +P++VTF
Sbjct: 310 DCAK--EVFEKMKTGRHKPDRVTYITLLD-RFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
++L++ L K+G A LD M +GILPN TY +I GL +++R D+A LF M+
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
G P Y ++ + K AL + G P + + + + L +A R E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
A + + + + PD V Y +M++ S+ G++ +A+KLLS+M E G PD N+LI
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
+D+A + + + + P T+ L+ G+ +NG + +A +LF M + GC P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 412 SVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP------TLFLRLSQGGNRVH----- 459
+ FN L D LCK E+ A +LF M++G P T+ L + G
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 460 ---------DKASLQTMVEQYCTAGLIHKAYKILMQ---------------------LAE 489
D +L T++ A LI AYKI+ LAE
Sbjct: 667 HQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE 726
Query: 490 SGNLPDIITYNS--LINGFCKVG---------------NINGALKLFKELQLK-GLRPDS 531
+G + + ++++ + NG C+ G N++GA LF++ G++P
Sbjct: 727 AG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKL 785
Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
TY LI GL D E A +F Q+ GC P A Y L+ + K F L+
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELY-- 843
Query: 592 YLRDISGRDDESMK-----SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWL 642
+++S + E+ I ++ G V++A+ ++ ++D +P Y +
Sbjct: 844 --KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL---MSDRDFSPTACTYGPLI 898
Query: 643 IGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL 697
GL + G++ EA +F +++ C+ P+C LI+G K G D A +F +
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCR-----PNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
K G +RP + Y + + H +K G + D Y
Sbjct: 954 KEG--VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 169/705 (23%), Positives = 311/705 (44%), Gaps = 63/705 (8%)
Query: 48 FRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
+R I R L++++S ++ L K D L E+ + + F + I
Sbjct: 211 YRRMILEGFRPSLQTYSS---LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
+ G +A E +M + C PDV Y +++ + A V+ +M P+
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
VT+ L++ S + + + EM + G +P+ T+TI++ LC+ EA+
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
M+D G P+ YN L+ G ++ R+D+AL L + E G P +Y ID ++
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
A + KM + I P++V + L++AG+ ++A ++ +++ G+VPD+ YN
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
++K + +G +D+A L E+ + P+ LI + + VD+A K+F +M++
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
P+V +N L+ GL K G++++A LF M P + + T+
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP-------------NTITFNTL 614
Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
+ C + A K+L ++ + G +PD+ TYN++I G K G + A+ F +++ K +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLV 673
Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA-------------------- 567
PD VT TL+ G+ + EDA++I N C PA
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYN-CADQPANLFWEDLIGSILAEAGIDNA 732
Query: 568 ------------------VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--I 607
+ ++ +SC+ S A +L+ ++ +D+ + + I
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV--ECK 665
L+ +E A L++ +A Y L + G++ E ++ + EC+
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
A + V I GL K G +D A+D++ Y L + P C Y
Sbjct: 853 ANTITHNIV--ISGLVKAGNVDDALDLY-YDLMSDRDFSPTACTY 894
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 246/558 (44%), Gaps = 91/558 (16%)
Query: 93 NVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
++ +V D + +++ Y KVG+ ++A++ +M E C+PDV + N+++N ++
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
A ++ M ++ P +VT++ L+ GL K+GK + AI++ + M Q+G PN T+ +
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 211 SGLCQINRADEAYRLFLKMKDSGCS----------------------------------P 236
LC+ + A ++ KM D GC P
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP 675
Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKD---------------------------GF 269
DFV LL G K +++A ++ +F + F
Sbjct: 676 DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF 735
Query: 270 VPRLGSYSCLIDG------LFRAKRYDEAYAWYRKMFEE-----KIEPDVVLYGVMIRGL 318
RL + DG + R + R +FE+ ++P + Y ++I GL
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
EA ++ A + ++ G +PD YN L+ + G +D+ L E+ + NT
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 379 HTFTILICGMCRNGMVDDAQKLF-NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
T I+I G+ + G VDDA L+ + M P+ + LIDGL K+G L +A LF
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
M + G P A ++ + AG A + ++ + G PD+
Sbjct: 916 GMLDYGCRPNC--------------AIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
TY+ L++ C VG ++ L FKEL+ GL PD V Y +INGL + R E+A +F +
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 557 MPQN-GCTPSPAVYKSLM 573
M + G TP Y SL+
Sbjct: 1022 MKTSRGITPDLYTYNSLI 1039
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 168/322 (52%), Gaps = 2/322 (0%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ +LI G + E A + F ++K C PDV YN +L+ + +Y EM
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKML-DEMTQRGILPNKFTYTIVISGLCQINR 218
C N +T +++I+GL K+G + A+ + D M+ R P TY +I GL + R
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
EA +LF M D GC P+ YN L+NGF K D A AL + K+G P L +YS
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR-ER 337
L+D L R DE +++++ E + PDVV Y ++I GL ++ ++++A+ L ++M+ R
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
GI PD Y YN+LI G++++A + EI + PN TF LI G +G + A
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Query: 398 QKLFNKMEKAGCFPSVGMFNAL 419
++ M G P+ G + L
Sbjct: 1087 YAVYQTMVTGGFSPNTGTYEQL 1108
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 221/529 (41%), Gaps = 120/529 (22%)
Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL-------------- 162
AL+ KM + C PDV+ YN ++ + A+ +++M KL
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPG 686
Query: 163 -------------------NC---------------------LPNIVTFS--LLINGLSK 180
NC + N V+FS L+ NG+ +
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR 746
Query: 181 SGKTEV---------------AIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYR 224
G + + A + ++ T+ G+ P TY ++I GL + + + A
Sbjct: 747 DGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 806
Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
+FL++K +GC PD YN LL+ + K ++DE L + +++ +I GL
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 285 RAKRYDEAYA-WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
+A D+A +Y M + P YG +I GLS++G++ +A +L M + G P+
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
YN LI GF G D A +L + K P+ T+++L+ +C G VD+ F +
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
++++G P V +N +I+GL K+ LE+A +LF +M+ + T
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT----------------- 1029
Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
PD+ TYNSLI G + A K++ E+Q
Sbjct: 1030 ------------------------------PDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
GL P+ T+ LI G + E A+ ++ M G +P+ Y+ L
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/586 (26%), Positives = 277/586 (47%), Gaps = 41/586 (6%)
Query: 23 EPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR-----------LRSFASNS---- 67
+PL+PF+ T + + T++P + KR R +S A+++
Sbjct: 15 KPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKH 74
Query: 68 ------AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
+I L D L +++ D+F +IS Y +VG E+A+E F
Sbjct: 75 TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134
Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
++KEF C P V IYN VL+ + + VY +M + PN+ T+++L+ L K+
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
K + A K+L EM+ +G P+ +YT VIS +C++ E L + + P Y
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVY 249
Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
NAL+NG CK A L+R + G P + SYS LI+ L + + + A+++ +M +
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK 309
Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLD 360
P++ +++G G DA+ L + M R G+ P+ YN L++GFC G +
Sbjct: 310 RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369
Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
+A S+ + + PN T+ LI G + G +D A ++NKM +GC P+V ++ ++
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
+ LC+ + ++A L + + N + ++ C AG + A
Sbjct: 430 EALCRHSKFKEAESL-------------IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 481 YKILMQLAESGNLP-DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
K+ Q+ + P +I+TYN L++G K I A L +E+ ++G+ S TY TL++
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
G A ++ G+M +G +P ++ C++ K A
Sbjct: 537 GSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 256/505 (50%), Gaps = 25/505 (4%)
Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
K++ F C D++I +V+++ + L A+ ++Y + + C P++ ++ +++ L
Sbjct: 103 KLQGFHCSEDLFI--SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN 160
Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
+ ++ + +M + G PN FTY +++ LC+ N+ D A +L ++M + GC PD V+Y
Sbjct: 161 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220
Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
+++ C++ V E L FE P + Y+ LI+GL + Y A+ R+M E+
Sbjct: 221 TVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEK 275
Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
I P+V+ Y +I L +G+++ A L+ M +RG P+ Y ++L+KG G A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 363 RSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
L ++ + L PN + L+ G C +G + A +F+ ME+ GC P++ + +LI+
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
G K G L+ A ++ KM G P + + MVE C +A
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVV--------------YTNMVEALCRHSKFKEA 441
Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL-QLKGLRPDSVTYGTLIN 539
++ +++ P + T+N+ I G C G ++ A K+F+++ Q P+ VTY L++
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501
Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
GL + +R E+A+ + ++ G S + Y +L+ SC +A L + + D
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Query: 600 DDESMKS-IEEFLQKGEVENAIQGL 623
D+ +M I + ++G+ E A Q L
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQML 586
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 140/561 (24%), Positives = 245/561 (43%), Gaps = 71/561 (12%)
Query: 151 LALAVYYEMVKLNCLPNI-VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
LAL + + N + +TF ++I L+ G+ + +L +M +G ++ + V
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117
Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
IS Q+ A+ A +F ++K+ GC P YN +L
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVL------------------------ 153
Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
D L R Y YR M + EP+V Y V+++ L + KV A K
Sbjct: 154 -----------DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKK 202
Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
LL +M +G PD Y +I C++GL+ + R L P + LI G+C
Sbjct: 203 LLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLC 257
Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLF 448
+ A +L +M + G P+V ++ LI+ LC +G++E A + L ++ G +P ++
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFC 507
+L ++V+ G A + Q+ L P+++ YN+L+ GFC
Sbjct: 318 --------------TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
GNI A+ +F ++ G P+ TYG+LING + + A I+ +M +GC P+
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD--ESMKSIEEFLQKGEVENAIQGLLE 625
VY +++ CR KF A SL +I +++ S+ + F+ KG + E
Sbjct: 424 VYTNMVEALCRHSKFKEAESLI-----EIMSKENCAPSVPTFNAFI-KGLCDAGRLDWAE 477
Query: 626 MDFKLNDFQ------LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
F+ + Q + Y L GL + +++EA + + + + L+HG
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 680 LCKRGYLDLAMDVFLYTLKNG 700
C G +A+ + + +G
Sbjct: 538 SCNAGLPGIALQLVGKMMVDG 558
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 180/365 (49%), Gaps = 12/365 (3%)
Query: 65 SNSAVISMLLKPNGFDLYWQTLDE-LRSG---NVSVVSDVFFVLISGYYKVGDCEKALES 120
S S +I++L +L + L + L+ G N+ +S L+ G + G AL+
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS----LVKGCFLRGTTFDALDL 338
Query: 121 FGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
+ +M + F QP+V YN ++ + A++V+ M ++ C PNI T+ LING +
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
K G + A+ + ++M G PN YT ++ LC+ ++ EA L M C+P
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVP-RLGSYSCLIDGLFRAKRYDEAYAWYRK 298
+NA + G C R+D A + R E+ P + +Y+ L+DGL +A R +EAY R+
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
+F +E Y ++ G AG A++L+ M G PD N +I +C G
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Query: 359 LDQARSLQ--VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
++A + V +R P+ ++T +I G+CR+ +D L +M AG PS+ +
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638
Query: 417 NALID 421
+ LI+
Sbjct: 639 SVLIN 643
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 215/510 (42%), Gaps = 63/510 (12%)
Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
+VD LL+ + GF + +I + + A + ++ E +P V +Y
Sbjct: 91 QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 150
Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
++ L +++ + DM+ G P+ + YN L+K C +D A+ L VE+ +
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210
Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
P+ ++T +I MC G+V + ++L + E P V ++NALI+GLCK + + A
Sbjct: 211 GCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGA 265
Query: 433 NLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
L +M E G +P + S T++ C +G I A+ L Q+ + G
Sbjct: 266 FELMREMVEKGISPNVI--------------SYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKEL-QLKGLRPDSVTYGTLINGLQRVDREEDA 550
P+I T +SL+ G G AL L+ ++ + GL+P+ V Y TL+ G A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
+F M + GC+P+ Y SL+ +R A +W +
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW------------------NKM 413
Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
L G N + YT + LC+ + KEA ++ ++ + +
Sbjct: 414 LTSGCCPNVV----------------VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457
Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYH 728
P+ I GLC G LD A VF ++ P + Y LL L +K N+ AY
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVF-RQMEQQHRCPPNIVTYNELLDGL--AKANRIEEAYG 514
Query: 729 LLCRMKSVGYDLDACLYPKTKSLLPGPWNT 758
L + G + + Y +LL G N
Sbjct: 515 LTREIFMRGVEWSSSTY---NTLLHGSCNA 541
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 161/377 (42%), Gaps = 45/377 (11%)
Query: 18 IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRK-RLRSFASNSAVISMLLKP 76
+E + P +S +T+ +V+ + ++ F F KR + +S V L+
Sbjct: 273 VEKGISP--NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG 330
Query: 77 NGFDLY--WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
FD W + +R + + L+ G+ G+ KA+ F M+E C P++
Sbjct: 331 TTFDALDLWNQM--IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
Y +++N ++ A+ ++ +M+ C PN+V ++ ++ L + K + A +++ M
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRR 253
++ P+ T+ I GLC R D A ++F +M+ C P+ V YN LL+G K R
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDG-----------------LFRAKRYDE----- 291
++EA L R G +Y+ L+ G + K DE
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNM 568
Query: 292 ---AYAWYRK------MFE------EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
AY K M + K PDV+ Y +I GL + +D + LL M
Sbjct: 569 IILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMIS 628
Query: 337 RGIVPDTYCYNALIKGF 353
GIVP ++ LI F
Sbjct: 629 AGIVPSIATWSVLINCF 645
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 234/428 (54%), Gaps = 13/428 (3%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+ ++ +MVK P+IV F+ L++ + K K +V I + +M GI + +T+ IVI+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C + A + KM G PD V +L+NGFC+ RV +A++L+ + G+ P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+ +Y+ +ID L + KR ++A+ +++++ + I P+VV Y ++ GL + + DA +LL
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
SDM ++ I P+ Y+AL+ F G + +A+ L E+ + P+ T++ LI G+C +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
+D+A ++F+ M GC V +N LI+G CKA +E LF +M
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM------------ 356
Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
SQ G V + + T+++ + AG + KA + Q+ G PDI TYN L+ G C G
Sbjct: 357 SQRG-LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
+ AL +F+++Q + + D VTY T+I G+ + + E+A+ +F + G P Y +
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 572 LMTWSCRR 579
+M+ C +
Sbjct: 476 MMSGLCTK 483
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 230/446 (51%), Gaps = 15/446 (3%)
Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
A++ F M + P + +N +L+ + + + + +++ +M L ++ TF+++IN
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
+ +A+ +L +M + G P++ T +++G C+ NR +A L KM + G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
D VAYNA+++ CK +RV++A + E+ G P + +Y+ L++GL + R+ +A
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
M ++KI P+V+ Y ++ + GKV +A +L +M I PD Y++LI G C
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
+D+A + + + L + ++ LI G C+ V+D KLF +M + G + +
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 417 NALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
N LI G +AG+++KA F +M+ G +P ++ + ++ C G
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW--------------TYNILLGGLCDNG 414
Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
+ KA I + + DI+TY ++I G CK G + A LF L LKGL+PD VTY
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 536 TLINGLQRVDREEDAFRIFGQMPQNG 561
T+++GL + ++ +M Q G
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 215/433 (49%), Gaps = 13/433 (3%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
F L+S K+ + + KM+ + D+Y +N V+N LAL++ +M+
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
KL P+ VT L+NG + + A+ ++D+M + G P+ Y +I LC+ R +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
+A+ F +++ G P+ V Y AL+NG C R +A LL K P + +YS L+
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
D + + EA + +M I+PD+V Y +I GL ++ +A ++ M +G +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
D YN LI GFC ++ L E+ +R + NT T+ LI G + G VD AQ+
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
F++M+ G P + +N L+ GLC GELEKA ++F M Q D
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-------------QKREMDLD 434
Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
+ T++ C G + +A+ + L+ G PDI+TY ++++G C G ++ L+
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Query: 521 ELQLKGLRPDSVT 533
+++ +GL + T
Sbjct: 495 KMKQEGLMKNDCT 507
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 215/500 (43%), Gaps = 82/500 (16%)
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
AI + +M + P+ + ++S + ++ + D L KM+ G D +N ++N
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
FC +V AL++L K G+ P + L++G R R +A + KM E +P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
D+V Y +I L + +V DA ++ +GI P+ Y AL+ G C+ A L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
++ K+ PN T++ L+ +NG V +A++LF +M + P + +++LI+GLC
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC-- 306
Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
+HD+ I +A ++
Sbjct: 307 -------------------------------LHDR---------------IDEANQMFDL 320
Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
+ G L D+++YN+LINGFCK + +KLF+E+ +GL ++VTY TLI G +
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
+ A F QM G +P Y L+ C
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLC----------------------------- 411
Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
GE+E A+ +M + D + YT + G+C+ G+V+EA ++F L
Sbjct: 412 -----DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 667 IVTPPSCVKLIHGLCKRGYL 686
+ ++ GLC +G L
Sbjct: 467 KPDIVTYTTMMSGLCTKGLL 486
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 170/359 (47%), Gaps = 10/359 (2%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+A+I L K + + E+ + + L++G A M +
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
P+V Y+A+L+ + L A ++ EMV+++ P+IVT+S LINGL + +
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A +M D M +G L + +Y +I+G C+ R ++ +LF +M G + V YN L+
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
GF + VD+A + G P + +Y+ L+ GL ++A + M + +++
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
D+V Y +IRG+ + GKV++A L + +G+ PD Y ++ G C GLL + +L
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
++ + + N T + +G + + +L KM G PS + + G+CK
Sbjct: 494 TKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPS--LLKDIKSGVCK 542
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 154/360 (42%), Gaps = 56/360 (15%)
Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLF 448
R+ ++DA LF+ M K+ FPS+ FN L+ + K + + L KME+ G L+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 449 ----------------LRLSQGGNRVH-----DKASLQTMVEQYCTAGLIHKAYKILMQL 487
L LS G + D+ ++ ++V +C + A ++ ++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
E G PDI+ YN++I+ CK +N A FKE++ KG+RP+ VTY L+NGL R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
DA R+ M + TP+ Y +L+
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALL---------------------------------- 267
Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
+ F++ G+V A + EM D + Y+ + GLC ++ EA +F ++V +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
S LI+G CK ++ M +F + G + N L++ + D K +
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 232 bits (591), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 236/460 (51%), Gaps = 13/460 (2%)
Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
Y +L F AL ++ MV LP+I+ F+ L++ ++K + +V I + ++M
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
GI P T IV+ +C ++ A KM G PD V + +LLNG+C R++
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
+A+AL GF P + +Y+ LI L + + + A + +M P+VV Y ++
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
GL E G+ DA LL DM +R I P+ + ALI F +G L +A+ L + +
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
P+ T+ LI G+C G++D+A+++F ME+ GC+P+ ++ LI G CK+ +E +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
FY+M SQ G V + + +++ YC G A ++ Q++ PD
Sbjct: 351 FYEM------------SQKG-VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
I TYN L++G C G + AL +F+ ++ + + + VTY +I G+ ++ + EDAF +F
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
+ G P+ Y ++++ CRR A SL+ + D
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 228/454 (50%), Gaps = 13/454 (2%)
Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
AL+ F +M P + + +L++ + + + ++++ +M L P + T +++++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
+ S + A L +M + G P+ T+T +++G C NR ++A LF ++ G P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
+ V Y L+ CK R ++ A+ L +G P + +Y+ L+ GL R+ +A
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
R M + +IEP+V+ + +I + GK+ +A +L + M + + PD + Y +LI G C
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
GLLD+AR + + + PN +T LI G C++ V+D K+F +M + G + +
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
LI G C G + A +F +M + P D + +++ C G
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPP-------------DIRTYNVLLDGLCCNGK 413
Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
+ KA I + + +I+TY +I G CK+G + A LF L KG++P+ +TY T
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
+I+G R +A +F +M ++G P+ +VYK
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 238/493 (48%), Gaps = 31/493 (6%)
Query: 47 GFRFFI--WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
GF F+I +++ RK LR+ N L + DL+ + + S + + D F L
Sbjct: 40 GFCFWIRAFSSYRKILRNGLHN------LQFNDALDLFTRMV---HSRPLPSIID-FTRL 89
Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
+S K+ + + F +M+ P + N V++ A +M+KL
Sbjct: 90 LSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGF 149
Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
P++VTF+ L+NG + E AI + D++ G PN TYT +I LC+ + A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
LF +M +G P+ V YNAL+ G C++ R +A LLR K P + +++ LID
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
+ + EA Y M + + PDV YG +I GL G + +A ++ M G P+
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
Y LI GFC ++ + E+ ++ + NT T+T+LI G C G D AQ++FN+M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDK 461
P + +N L+DGLC G++EKA ++F M E+ N + + QG
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG------- 442
Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
C G + A+ + L G P++ITY ++I+GFC+ G I+ A LFK+
Sbjct: 443 ---------MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 522 LQLKGLRPDSVTY 534
++ G P+ Y
Sbjct: 494 MKEDGFLPNESVY 506
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 215/470 (45%), Gaps = 22/470 (4%)
Query: 238 FVAYNALL-NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
F +Y +L NG L+ ++AL L +P + ++ L+ + + RYD + +
Sbjct: 48 FSSYRKILRNGLHNLQ-FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106
Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
+M I P + +++ + + + A L M + G PD + +L+ G+C
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
++ A +L +I PN T+T LI +C+N ++ A +LFN+M G P+V +
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 417 NALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
NAL+ GLC+ G A L M I N F +++ +
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF----------------TALIDAFVK 270
Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
G + +A ++ + + PD+ TY SLING C G ++ A ++F ++ G P+ V
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
Y TLI+G + R ED +IF +M Q G + Y L+ C + +A ++ Q
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 594 RDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
+ D + + + L G+VE A+ M + D + YTI + G+C+ G+V+
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
+A ++F L + +I G C+RG + A +F ++GF+
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/659 (25%), Positives = 303/659 (45%), Gaps = 86/659 (13%)
Query: 26 LPFLSKTTVTSVIMKTKNPQVGFR-------FFIWAAKRKRLRSFASNSAVISMLLKPNG 78
LP L++ T +K K+ F+ FF + + + + + VI + ++ N
Sbjct: 62 LPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNR 121
Query: 79 FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK---ALESFGKMKEFDCQPDVYI 135
D+ ++ + + F +LI + DC K +L +FGK+ + QPDV
Sbjct: 122 PDVAISLYRKMEIRRIPLNIYSFNILIKCFC---DCHKLSFSLSTFGKLTKLGFQPDVVT 178
Query: 136 YNAVLN-IAFRKQL--------------FLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
+N +L+ + ++ FL A+A++ +MV++ P ++TF+ LINGL
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL 238
Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
G+ A ++++M +G+ + TY +++G+C++ A L KM+++ PD V
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
Y+A+++ CK +A L + G P + +Y+C+IDG R+ +A R M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
E +I PDV+ + +I + GK+ +A KL +M R I PDT YN++I GFC D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
A+ + + + P+ TF +I CR VD+ +L ++ + G + +N LI
Sbjct: 419 DAKHM----FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
G C+ L A LF +M
Sbjct: 475 HGFCEVDNLNAAQDLFQEM----------------------------------------- 493
Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
G PD IT N L+ GFC+ + AL+LF+ +Q+ + D+V Y +I+G
Sbjct: 494 -------ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
+ + + ++A+ +F +P +G P Y +++ C + S A ++ ++D
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA-NVLFHKMKDNGHEP 605
Query: 601 DESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG-LCQDGQVKEALN 656
D S + I L+ GE++ +I+ + EM + N F +TI ++ L DG++ ++ +
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEM--RSNGFSGDAFTIKMVADLITDGRLDKSFS 662
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 157/585 (26%), Positives = 264/585 (45%), Gaps = 59/585 (10%)
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
AI D M + VI ++NR D A L+ KM+ + ++N L+
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
FC ++ +L+ K GF P + +++ L+ GL R EA A
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA------------ 197
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
L+G M+ E G + +A+ L M E G+ P +N LI G C G + +A +L
Sbjct: 198 ---LFGYMV----ETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
++ + + T+ ++ GMC+ G A L +KME+ P V +++A+ID LCK
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
G A LF +M E G P +F + M++ +C+ G A ++L
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVF--------------TYNCMIDGFCSFGRWSDAQRLLR 355
Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
+ E PD++T+N+LI+ K G + A KL E+ + + PD+VTY ++I G + +
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
R +DA +F M +P + +++ CR ++ +Q LR+IS R +
Sbjct: 416 RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG----MQLLREISRRGLVANT 467
Query: 606 SIEEFLQKGEVE----NAIQGLLEMDFKLNDFQLAPYTI----WLIGLCQDGQVKEALNI 657
+ L G E NA Q L + ++ + P TI L G C++ +++EAL +
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQ---EMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
F V+ K + + +IHG+CK +D A D+F +G + P V Y + F
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG--VEPDVQTYNVMISGF 582
Query: 718 SKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
+ A L +MK G++ D Y +L+ G E++
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTY---NTLIRGCLKAGEID 624
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/699 (25%), Positives = 323/699 (46%), Gaps = 32/699 (4%)
Query: 29 LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK----PNGFDLYWQ 84
LS V ++ KNP+ F F A R +A ++ V +L+ + +
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSAT---RHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 85 TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLN-- 141
++ +RS DV +I Y K ++AL+ F +M+E F C+P + YN +LN
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
+ ++ + + +L Y+E + PN+ T+++LI K + E A LD M + G P
Sbjct: 125 VEAKQWVKVESLFAYFETAGV--APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP 182
Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
+ F+Y+ VI+ L + + D+A LF +M + G +PD YN L++GF K + A+ L
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 262 -RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
R E P + +++ +I GL + R D+ + +M + + E D+ Y +I GL +
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
AG V A + +++ ER D YN ++ GFC G + ++ L + ++S+ N +
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVS 361
Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
+ ILI G+ NG +D+A ++ M G + I GLC G + KA + ++E
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
S GG+ D + ++++ C + +A ++ ++++ G + N
Sbjct: 422 -----------SSGGHL--DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
+LI G + + A +E+ G RP V+Y LI GL + + +A +M +N
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVE 617
G P Y L+ CR RK LA LW Q+L+ SG + + M I G+++
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ--SGLETDVMMHNILIHGLCSVGKLD 586
Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
+A+ + M+ + L Y + G + G A I+ + + S ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
GLC + AM+ F +G N L+R+++
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 229 bits (583), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 221/423 (52%), Gaps = 14/423 (3%)
Query: 120 SFG-KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
SFG KM+ ++Y YN ++N R LALA+ +M+KL P+IVT + L+NG
Sbjct: 99 SFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGF 158
Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
+ A+ ++D+M + G P+ T+T +I GL N+A EA L +M GC PD
Sbjct: 159 CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218
Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
V Y A++NG CK D AL LL E + YS +ID L + + D+A + +
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278
Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
M + + P+V+ Y +I L G+ DA +LLSDM ER I P+ ++ALI F G
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
L +A L E+ KR PN T++ LI G C + +A+++ M + C P+V +N
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
LI+G CKA ++K ME LF +SQ G V + + T++ + A
Sbjct: 399 LINGFCKAKRVDKG------ME------LFREMSQRG-LVGNTVTYTTLIHGFFQARDCD 445
Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
A + Q+ G P+I+TYN L++G CK G + A+ +F+ LQ + PD TY +I
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 539 NGL 541
G+
Sbjct: 506 EGM 508
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 256/534 (47%), Gaps = 50/534 (9%)
Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
SF + + F + Y Y VL A+ ++ M + P+I+ FS L++ ++
Sbjct: 31 SFCRRRAFSGKTS-YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIA 89
Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
K K ++ I ++M GI N +TY I+I+ C+ +R A L KM G PD V
Sbjct: 90 KMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIV 149
Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
N+LLNGFC R+ +A+AL+ + G+ P +++ LI GLF + EA A +M
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209
Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
+ +PD+V YG ++ GL + G A+ LL+ M I + Y+ +I C
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269
Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
D A +L E+ + PN T++ LI +C G DA +L + M + P++ F+AL
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
ID K G+L KA L+ +M + +P +F + +++ +C +
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIF--------------TYSSLINGFCMLDRLG 375
Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
+A ++L + LP+++TYN+LINGFCK ++ ++LF+E+ +GL ++VTY TLI
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
+G + ++A +F QM G P+ Y L+ C+ K + A ++
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF--------- 486
Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
E+LQ+ +E I Y I + G+C+ G+ K
Sbjct: 487 ----------EYLQRSTMEPDIY---------------TYNIMIEGMCKAGKWK 515
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 220/499 (44%), Gaps = 49/499 (9%)
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
AI + M Q P+ ++ ++S + ++N+ D KM+ G S + YN L+N
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
FC+ R+ ALALL K G+ P + + + L++G R +A A +M E +P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
D V + +I GL K +A+ L+ M +RG PD Y A++ G C G D A +L
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
++ N ++ +I +C+ DDA LF +ME G P+V +++LI LC
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
G A+ L M E NP L + +++ + G + KA K+
Sbjct: 302 GRWSDASRLLSDMIERKINPNL--------------VTFSALIDAFVKKGKLVKAEKLYE 347
Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
++ + P+I TY+SLINGFC + + A ++ + + K P+ VTY TLING +
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407
Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
R + +F +M Q G + Y +L
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTL--------------------------------- 434
Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
I F Q + +NA +M + Y I L GLC++G++ +A+ +F L
Sbjct: 435 -IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 666 AIVTPPSCVKLIHGLCKRG 684
+ +I G+CK G
Sbjct: 494 MEPDIYTYNIMIEGMCKAG 512
Score = 172 bits (436), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 170/337 (50%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
F LI G + +A+ +M + CQPD+ Y AV+N ++ LAL + +M
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
N+V +S +I+ L K + A+ + EM +G+ PN TY+ +IS LC R
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
+A RL M + +P+ V ++AL++ F K ++ +A L K P + +YS L
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
I+G R EA M + P+VV Y +I G +A +V M+L +M +RG+
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
V +T Y LI GF D A+ + ++ PN T+ IL+ G+C+NG + A
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
+F ++++ P + +N +I+G+CKAG+ + + F
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 123/259 (47%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
S VI L K D E+ + V + LIS G A M E
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
P++ ++A+++ +K + A +Y EM+K + PNI T+S LING +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A +ML+ M ++ LPN TY +I+G C+ R D+ LF +M G + V Y L++
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
GF + R D A + + G P + +Y+ L+DGL + + +A + + +EP
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 307 DVVLYGVMIRGLSEAGKVK 325
D+ Y +MI G+ +AGK K
Sbjct: 497 DIYTYNIMIEGMCKAGKWK 515
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 199/445 (44%), Gaps = 25/445 (5%)
Query: 297 RKMFEEKIEPDVVLYGVMIR-GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
R+ F K D Y ++R GLS+ ++ DA+ L M + P ++ L+
Sbjct: 35 RRAFSGKTSYD---YREVLRTGLSDI-ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAK 90
Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
+ D S ++ N +T+ ILI CR + A L KM K G P +
Sbjct: 91 MNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVT 150
Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNP-TLFLRLSQGGNRVHDKASLQTMVEQYCT 473
N+L++G C + A L +M E+G P T+ G +H+KAS
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS---------- 200
Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
+A ++ ++ + G PD++TY +++NG CK G+ + AL L +++ + + V
Sbjct: 201 -----EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
Y T+I+ L + E+DA +F +M G P+ Y SL++ C ++S A L +
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 594 -RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
R I+ I+ F++KG++ A + EM + D + Y+ + G C ++
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
EA + +++ + + LI+G CK +D M++F + G + L+
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVG 737
++D +A + +M SVG
Sbjct: 436 HGFFQARDCD--NAQMVFKQMVSVG 458
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 179/425 (42%), Gaps = 22/425 (5%)
Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
D+A + M + + P ++ + ++ +++ K + M GI + Y YN L
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
I FC L A +L ++ K P+ T L+ G C + DA L ++M + G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
P F LI GL F + + L R+ Q G + D + +V
Sbjct: 180 KPDTVTFTTLIHGL------------FLHNKASEAVALIDRMVQRGCQ-PDLVTYGAVVN 226
Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
C G A +L ++ + +++ Y+++I+ CK + + AL LF E++ KG+RP
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
+ +TY +LI+ L R DA R+ M + P+ + +L+ ++ K A L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 590 LQYL-RDISGRDDESMKSIEEFL---QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
+ + R I I F + GE + ++ ++ D N + Y + G
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN---VVTYNTLINGF 403
Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
C+ +V + + +F + + + + LIHG + D A VF + G + P
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG--VHP 461
Query: 706 RVCNY 710
+ Y
Sbjct: 462 NILTY 466
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 253/518 (48%), Gaps = 35/518 (6%)
Query: 64 ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
++ S V++ L + +L + +E++ G + + +++ + K G E+A + F +
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
M+E C P+V Y A+++ + + A ++ M+ CLPNIVT+S LI+G K+G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 184 TEVAIKMLDEMT----------------QRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
E A ++ + M PN TY ++ G C+ +R +EA +L
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
M GC P+ + Y+AL++G CK+ ++DEA + + GF L +YS LID F+ K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
R D A KM E P+VV+Y MI GL + GK +A KL+ M E+G P+ Y
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
A+I GF +G ++ L + + PN T+ +LI C+NG +D A L +M++
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL-FLRLSQGGNRVHDKASLQT 466
+ +I+G K +E LL EIG++ T FL + +
Sbjct: 844 HWPTHTAGYRKVIEGFNKEF-IESLGLL---DEIGQDDTAPFLSV------------YRL 887
Query: 467 MVEQYCTAGLIHKAYKILMQLAE-SGNLPDI-ITYNSLINGFCKVGNINGALKLFKELQL 524
+++ A + A ++L ++A S L D TYNSLI C + A +LF E+
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 947
Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
KG+ P+ ++ +LI GL R + +A + + C
Sbjct: 948 KGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 985
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 172/734 (23%), Positives = 319/734 (43%), Gaps = 80/734 (10%)
Query: 29 LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFAS-NSAVISMLLKPNGFDLYWQTLD 87
LS++ V V+ P FF+WA ++ + A +A++ ++++ + + + L
Sbjct: 130 LSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQ 189
Query: 88 ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
++R + V + VL+ + + G ALE G++K+F +P YN ++ +
Sbjct: 190 QIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD 249
Query: 148 LFLLALAVYYEM---------VKLNC-----------------------LPNIVTFSLLI 175
A ++ EM L C +P+ V ++ LI
Sbjct: 250 RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLI 309
Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
+GL ++ E A+ L+ M LPN TY+ ++ G + R+ M GC
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369
Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG------------- 282
P +N+L++ +C A LL+ K G +P Y+ LI
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 283 ----------------------------LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
L A +Y++A++ R+M + PD Y +
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
+ L A K++ A L +M+ G+V D Y Y ++ FC GL++QAR E+ +
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
PN T+T LI + V A +LF M GC P++ ++ALIDG CKAG++EKA
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 435 LFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
+F +M K + ++ + + + + +++ +C + + +A K+L ++ G
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
P+ I Y++LI+G CKVG ++ A ++ E+ G TY +LI+ +V R++ A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEE 609
++ +M +N C P+ +Y ++ C+ K A+ L +Q + + + + + I+
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL-MQMMEEKGCQPNVVTYTAMIDG 788
Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
F G++E ++ L M K Y + + C++G + A N+ + +
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 670 PPSCVKLIHGLCKR 683
K+I G K
Sbjct: 849 TAGYRKVIEGFNKE 862
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 170/704 (24%), Positives = 308/704 (43%), Gaps = 111/704 (15%)
Query: 83 WQTLDELRSGNVSVVSDVFFV-LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
W+ L V VF+ LISG + E+A++ +M+ C P+V Y+ +L
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
K+ V M+ C P+ F+ L++ SG A K+L +M + G +P
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 405
Query: 202 NKFTYTIVISGLC-----------------------------QIN------------RAD 220
Y I+I +C +IN + +
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
+A+ + +M G PD Y+ +LN C +++ A L ++ G V + +Y+ ++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
D +A ++A W+ +M E P+VV Y +I +A KV A +L M G +
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 341 PDTYCYNALIKGFCDLGLLDQARSL-----------QVEIW-----KRDSLPNTHTFTIL 384
P+ Y+ALI G C G +++A + V+++ PN T+ L
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGK 443
+ G C++ V++A+KL + M GC P+ +++ALIDGLCK G+L++A + +M E G
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
TL+ + +++++Y A K+L ++ E+ P+++ Y +I
Sbjct: 706 PATLY--------------TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
+G CKVG + A KL + ++ KG +P+ VTY +I+G + + E + +M G
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQ------------YLRDISGRDDESMKSIEEFL 611
P+ Y+ L+ C+ +A +L + Y + I G + E ++S+
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLD 871
Query: 612 QKGE-------------VENAIQGL-LEMDFKLNDFQLAPYTIWLI-----------GLC 646
+ G+ ++N I+ LEM +L + ++A ++ L+ LC
Sbjct: 872 EIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE-EVATFSATLVDYSSTYNSLIESLC 930
Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
+V+ A +FS + + I S LI GL + + A+
Sbjct: 931 LANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 238/510 (46%), Gaps = 73/510 (14%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A +V EM+ +P+ T+S ++N L + K E+A + +EM + G++ + +TYTI++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ ++A + F +M++ GC+P+ V Y AL++ + K ++V A L + +G +P
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV----------------VLYGVMI 315
+ +YS LIDG +A + ++A + +M K PDV V YG ++
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
G ++ +V++A KLL M G P+ Y+ALI G C +G LD+A+ ++ E+ +
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706
Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
+T++ LI + D A K+ +KM + C P+V ++ +IDGLCK G+ ++A L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 436 FYKME--------------------IGKNPTLFLRLSQGGNR--VHDKASLQTMVEQYCT 473
ME IGK T L + G++ + + + +++ C
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 474 AGLIHKAYKILMQLAES---------------------------------GNLPDIITYN 500
G + A+ +L ++ ++ P + Y
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYR 886
Query: 501 SLINGFCKVGNINGALKLFKELQL--KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
LI+ K + AL+L +E+ L S TY +LI L ++ E AF++F +M
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
+ G P + SL+ R K S A L
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLL 976
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 213/509 (41%), Gaps = 56/509 (11%)
Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
N L+ C+ AL L + F P +Y+CLI +A R D A +R+M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
+ D L + GK ++A+ L+ VPDT Y LI G C+ L ++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
A + LPN T++ L+CG + +++ N M GC+PS +FN+L+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ--------------- 465
C +G+ A L KM + G P + G+ DK SL
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 466 ------------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
+ C+AG KA+ ++ ++ G +PD TY+ ++N C +
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
A LF+E++ GL D TY +++ + E A + F +M + GCTP+ Y +L+
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGL--------- 623
+ +K S A L+ L + + + + I+ + G+VE A Q
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620
Query: 624 --LEMDFKLNDF-----QLAPYTIWLIGLCQDGQVKEALNIFSVL----VECKAIVTPPS 672
++M FK D + Y L G C+ +V+EA + + E IV
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA- 679
Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
LI GLCK G LD A +V ++GF
Sbjct: 680 ---LIDGLCKVGKLDEAQEVKTEMSEHGF 705
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 172/680 (25%), Positives = 320/680 (47%), Gaps = 51/680 (7%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKM 124
SA++ L+K F L + +++ S V + DV+ +I ++ D +A E M
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVS--VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
+ C ++ YN +++ +KQ A+ + ++ + P++VT+ L+ GL K +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
E+ ++M+DEM P++ + ++ GL + + +EA L ++ D G SP+ YNAL
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
++ CK R+ EA L K G P +YS LID R + D A ++ +M + +
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
+ V Y +I G + G + A +++M + + P Y +L+ G+C G +++A
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
L E+ + P+ +TFT L+ G+ R G++ DA KLFN+M + P+ +N +I+G C
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 425 KAGELEKANLLFYKM-EIGKNP---------------------TLFLRLSQGGNRVHDKA 462
+ G++ KA +M E G P +F+ GN ++
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
++ +C G + +A + ++ + G D++ Y LI+G K + L KE+
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
+GL+PD V Y ++I+ + ++AF I+ M GC P+ Y +++ C+
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE--------NAI-QGLLEMDFKLNDF 633
+ A L + S + + + L KGEV+ NAI +GLL
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA-------- 785
Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAM 690
A Y + + G C+ G+++EA + + ++ P C+ +I+ LC+R + A+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMI---GDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 691 DVFLYTLKNGFILRPRVCNY 710
+++ + G +RP Y
Sbjct: 843 ELWNSMTEKG--IRPDRVAY 860
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 182/692 (26%), Positives = 316/692 (45%), Gaps = 54/692 (7%)
Query: 29 LSKTTVTSVIMKT-KNPQVGFRFFIWAAKRKRL-RSFASNSAVISMLLKPNGFDLYWQTL 86
L V +++ T +P++G RFF + + S AS +I L+K N L+W
Sbjct: 68 LKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKAN---LFWPAS 124
Query: 87 DELRSGNVSVV--SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
L++ + + SDVF VL S Y K FD Y+
Sbjct: 125 SLLQTLLLRALKPSDVFNVLFSCYEKC--------KLSSSSSFDLLIQHYV--------- 167
Query: 145 RKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
R + L + V+ M+ K++ LP + T S L++GL K +A+++ ++M GI P+
Sbjct: 168 RSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV 227
Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
+ YT VI LC++ A + M+ +GC + V YN L++G CK ++V EA+ + +
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287
Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
P + +Y L+ GL + + ++ +M + P ++ GL + GK
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
+++A+ L+ + + G+ P+ + YNALI C +A L + K PN T++I
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
LI CR G +D A +M G SV +N+LI+G CK G++ A +M K
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 444 -NPTLFLRLSQGGN-----------RVHDKA----------SLQTMVEQYCTAGLIHKAY 481
PT+ S G R++ + + T++ AGLI A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
K+ ++AE P+ +TYN +I G+C+ G+++ A + KE+ KG+ PD+ +Y LI+GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
+ +A + + C + Y L+ CR K A S+ + ++ D
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNI 657
+ + K + GLL+ +++D L P YT + + G KEA I
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLK---EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
+ +++ + + +I+GLCK G+++ A
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 216/435 (49%), Gaps = 17/435 (3%)
Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
L+ GY G KAL + +M P +Y + +L+ FR L A+ ++ EM + N
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
PN VT++++I G + G A + L EMT++GI+P+ ++Y +I GLC +A EA
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
+ C + + Y LL+GFC+ +++EAL++ + + G L Y LIDG
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
+ K + ++M + ++PD V+Y MI S+ G K+A + M G VP+
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD--DAQKLF 401
Y A+I G C G +++A L ++ S+PN T+ + + G VD A +L
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DILTKGEVDMQKAVELH 776
Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
N + K G + +N LI G C+ G +E+A+ L +M IG + D
Sbjct: 777 NAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRM-IGDGVS------------PDC 822
Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
+ TM+ + C + KA ++ + E G PD + YN+LI+G C G + A +L E
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 522 LQLKGLRPDSVTYGT 536
+ +GL P++ T T
Sbjct: 883 MLRQGLIPNNKTSRT 897
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/576 (25%), Positives = 248/576 (43%), Gaps = 50/576 (8%)
Query: 171 FSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
F LLI +S + + + M T+ +LP T + ++ GL + A LF M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
G PD Y ++ C+L+ + A ++ E G + Y+ LIDGL + ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
EA + + + ++PDVV Y ++ GL + + + ++++ +M P ++L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
++G G +++A +L + PN + LI +C+ +A+ LF++M K G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
P+ ++ LID C+ G+L+ A L F +G+ L+LS V+ SL +
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTA-LSF----LGEMVDTGLKLS-----VYPYNSL---IN 445
Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
+C G I A + ++ P ++TY SL+ G+C G IN AL+L+ E+ KG+ P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
T+ TL++GL R DA ++F +M + P+ Y ++ C S AF
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF- 564
Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
++E +KG V + Y + GLC G
Sbjct: 565 -----------------LKEMTEKGIVPDTYS----------------YRPLIHGLCLTG 591
Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
Q EA L + + L+HG C+ G L+ A+ V ++ G L
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
L+ L KD K + LL M G D +Y
Sbjct: 652 VLIDGSLKHKDRKLF--FGLLKEMHDRGLKPDDVIY 685
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 4/297 (1%)
Query: 86 LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
+D L GN + + L+ G+ + G E+AL +M + D+ Y +++ + +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
+ L + EM P+ V ++ +I+ SK+G + A + D M G +PN+ T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD--EALALLRS 263
YT VI+GLC+ +EA L KM+ P+ V Y L+ K VD +A+ L +
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNA 778
Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
K G + +Y+ LI G R R +EA +M + + PD + Y MI L
Sbjct: 779 ILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
VK A++L + M E+GI PD YN LI G C G + +A L+ E+ ++ +PN T
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/466 (31%), Positives = 226/466 (48%), Gaps = 22/466 (4%)
Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
+ D+Y ++N RK+ L A +V KL P+ +TFS L+NG G+ A+
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
++D M + P+ T + +I+GLC R EA L +M + G PD V Y +LN C
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
K AL L R E+ + YS +ID L + +D+A + + +M + I+ DVV
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
Y +I GL GK D K+L +M R I+PD ++ALI F G L +A+ L E+
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
R P+T T+ LI G C+ + +A ++F+ M GC P + ++ LI+ CKA +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 430 EKANLLFYKMEI-GKNP------TLFLRLSQGGNRVHDKASLQTMVEQ------------ 470
+ LF ++ G P TL L Q G K Q MV +
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 471 ---YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
C G ++KA +I ++ +S I YN +I+G C ++ A LF L KG+
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
+PD VTY +I GL + +A +F +M ++GCTP Y L+
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 219/439 (49%), Gaps = 13/439 (2%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
F L++G+ G +A+ +M E +PD+ + ++N K AL + M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
V+ P+ VT+ ++N L KSG + +A+ + +M +R I + Y+IVI LC+
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
D+A LF +M+ G D V Y++L+ G C + D+ +LR +P + ++S L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
ID + + EA Y +M I PD + Y +I G + + +A ++ M +G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
PD Y+ LI +C +D L EI + +PNT T+ L+ G C++G ++ A++
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
LF +M G PSV + L+DGLC GEL KA +F KM+ R++ G
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS-------RMTLG----- 489
Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
++ C A + A+ + L++ G PD++TYN +I G CK G+++ A LF
Sbjct: 490 -IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 520 KELQLKGLRPDSVTYGTLI 538
++++ G PD TY LI
Sbjct: 549 RKMKEDGCTPDDFTYNILI 567
Score = 217 bits (552), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 229/446 (51%), Gaps = 15/446 (3%)
Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
LI+G G +AL +M E+ QPD Y VLN + LAL ++ +M +
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
N ++V +S++I+ L K G + A+ + +EM +GI + TY+ +I GLC + D+
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
++ +M PD V ++AL++ F K ++ EA L G P +Y+ LIDG
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
+ EA + M + EPD+V Y ++I +A +V D M+L ++ +G++P+
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
T YN L+ GFC G L+ A+ L E+ R P+ T+ IL+ G+C NG ++ A ++F
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
KM+K+ +G++N +I G+C A +++ A +LF LS G + D
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDA------------WSLFCSLSDKGVK-PDVV 526
Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
+ M+ C G + +A + ++ E G PD TYN LI + +++L +E+
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 523 QLKGLRPDSVTYGTLINGL--QRVDR 546
++ G DS T +I+ L +R+D+
Sbjct: 587 KVCGFSADSSTIKMVIDMLSDRRLDK 612
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 157/594 (26%), Positives = 272/594 (45%), Gaps = 55/594 (9%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+ ++ M++ LP + F+ L + ++++ + ++ + M GI + +T TI+I+
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ + A+ + + G PD + ++ L+NGFC RV EA+AL+ + P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
L + S LI+GL R EA +M E +PD V YG ++ L ++G A+ L
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
M ER I Y+ +I C G D A SL E+ + + T++ LI G+C +
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
G DD K+ +M P V F+ALID K G+L +A L+ +M +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM-----------I 342
Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
++G D + ++++ +C +H+A ++ + G PDI+TY+ LIN +CK
Sbjct: 343 TRG--IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
++ ++LF+E+ KGL P+++TY TL+ G + + A +F +M G PS Y
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
L+ C GE+ A++ +M
Sbjct: 461 LLDGLC----------------------------------DNGELNKALEIFEKMQKSRM 486
Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDL 688
+ Y I + G+C +V +A ++F L + K + P V +I GLCK+G L
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD-KGV--KPDVVTYNVMIGGLCKKGSLSE 543
Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
A +F ++G N L+R+ L + + + L+ MK G+ D+
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHL--GGSGLISSVELIEEMKVCGFSADS 595
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 193/419 (46%), Gaps = 4/419 (0%)
Query: 5 LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
++E L ++D + +E +P ++ V + + K+ N + F +R S
Sbjct: 191 VSEALVLIDRM--VEYGFQP--DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 65 SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
S VI L K FD +E+ + + LI G G + + +M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
+ PDV ++A++++ ++ L A +Y EM+ P+ +T++ LI+G K
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
A +M D M +G P+ TY+I+I+ C+ R D+ RLF ++ G P+ + YN L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
+ GFC+ +++ A L + G P + +Y L+DGL ++A + KM + ++
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
+ +Y ++I G+ A KV DA L + ++G+ PD YN +I G C G L +A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
L ++ + P+ T+ ILI + + +L +M+ G +ID L
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 163/618 (26%), Positives = 285/618 (46%), Gaps = 77/618 (12%)
Query: 45 QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
+ + + + KR RL ++ S V S +G + Q + L SG + +
Sbjct: 39 SISSKIPLGSRKRNRLVLVSAASKVES-----SGLNGRAQKFETLSSGYSNSNGN----- 88
Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
G+Y + ALE D + + ++ V + L VY+ V
Sbjct: 89 --GHYSSVNSSFALE--------DVESNNHLRQMVRTGELEEGFKFLENMVYHGNV---- 134
Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
P+I+ + LI G + GKT A K+L+ + G +P+ TY ++ISG C+ + A
Sbjct: 135 -PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGSYSCLIDGL 283
+ +M SPD V YN +L C ++ +A+ +L R ++D + P + +Y+ LI+
Sbjct: 194 VLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIEAT 249
Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
R A +M + PDVV Y V++ G+ + G++ +A+K L+DM G P+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
+N +++ C G A L ++ ++ P+ TF ILI +CR G++ A + K
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
M + GC P+ +N L+ G CK ++++A +M +S+G D +
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM-----------VSRGC--YPDIVT 416
Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
TM+ C G + A +IL QL+ G P +ITYN++I+G K G A+KL E++
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
K L+PD++TY +L+ GL R + ++A + F + + G P+ + S+M C+ R+
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
A +L ++ + + +E+ YTI +
Sbjct: 537 RAID-FLVFMINRGCKPNET---------------------------------SYTILIE 562
Query: 644 GLCQDGQVKEALNIFSVL 661
GL +G KEAL + + L
Sbjct: 563 GLAYEGMAKEALELLNEL 580
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 203/401 (50%), Gaps = 17/401 (4%)
Query: 94 VSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
+SV DV + ++ G ++A+E +M + DC PDV Y ++ R
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A+ + EM C P++VT+++L+NG+ K G+ + AIK L++M G PN T+ I++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
+C R +A +L M G SP V +N L+N C+ + A+ +L + G P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
SY+ L+ G + K+ D A + +M PD+V Y M+ L + GKV+DA+++L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
+ + +G P YN +I G G +A L E+ +D P+T T++ L+ G+ R
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLR 450
G VD+A K F++ E+ G P+ FN+++ GLCK+ + ++A + L + + G P
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP----- 552
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
++ S ++E G+ +A ++L +L G
Sbjct: 553 ---------NETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/572 (25%), Positives = 252/572 (44%), Gaps = 67/572 (11%)
Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
R +L L++ A E LN F L +G S S + + N
Sbjct: 51 RNRLVLVSAASKVESSGLNGRAQ--KFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNH 108
Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
+V +G +E ++ M G PD + L+ GFC+L + +A +L
Sbjct: 109 LRQMVRTG-----ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL 163
Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
E G VP + +Y+ +I G +A + A + +M + PDVV Y ++R L ++GK+
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKL 220
Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
K AM++L M +R PD Y LI+ C + A L E+ R P+ T+ +L
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANLLFYKMEIGK 443
+ G+C+ G +D+A K N M +GC P+V N ++ +C G ++ LL + G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
+P++ + ++ C GL+ +A IL ++ + G P+ ++YN L+
Sbjct: 341 SPSV--------------VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
+GFCK ++ A++ + + +G PD VTY T++ L + + EDA I Q+ GC+
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
P Y ++ I+ + G+ AI+ L
Sbjct: 447 PVLITYNTV----------------------------------IDGLAKAGKTGKAIKLL 472
Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGL 680
EM K Y+ + GL ++G+V EA+ F E + + P+ V ++ GL
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH---EFERMGIRPNAVTFNSIMLGL 529
Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
CK D A+D ++ + G +P +Y +
Sbjct: 530 CKSRQTDRAIDFLVFMINRG--CKPNETSYTI 559
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 174/340 (51%)
Query: 69 VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
+I + +G + LDE+R + + VL++G K G ++A++ M
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
CQP+V +N +L ++ A + +M++ P++VTF++LIN L + G AI
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
+L++M Q G PN +Y ++ G C+ + D A +M GC PD V YN +L
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
CK +V++A+ +L G P L +Y+ +IDGL +A + +A +M + ++PD
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
+ Y ++ GLS GKV +A+K + GI P+ +N+++ G C D+A V
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
+ R PN ++TILI G+ GM +A +L N++ G
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 142/255 (55%), Gaps = 3/255 (1%)
Query: 87 DELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
D LR G + SVV+ F +LI+ + G +A++ KM + CQP+ YN +L+ +
Sbjct: 334 DMLRKGFSPSVVT--FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
++ A+ MV C P+IVT++ ++ L K GK E A+++L++++ +G P T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
Y VI GL + + +A +L +M+ PD + Y++L+ G + +VDEA+ FE
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
+ G P +++ ++ GL ++++ D A + M +P+ Y ++I GL+ G K
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 326 DAMKLLSDMRERGIV 340
+A++LL+++ +G++
Sbjct: 572 EALELLNELCNKGLM 586
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ +++ K G E A+E ++ C P + YN V++ + A+ + EM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
+ P+ +T+S L+ GLS+ GK + AIK E + GI PN T+ ++ GLC+ +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
D A + M + GC P+ +Y L+ G EAL LL G + +
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+ +++ L K + + L++L S S V + +I G K G KA++ +M+
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
D +PD Y++++ R+ A+ ++E ++ PN VTF+ ++ GL KS +T+
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
AI L M RG PN+ +YTI+I GL A EA L ++ + G
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 40/238 (16%)
Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
+ N+ + + G + K + + G PD + TLI G R+ + A +I
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL------------WLQYLRDI--SGRDDE 602
+ +G P Y +++ C+ + + A S+ + LR + SG+ +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
+M+ ++ LQ+ + I YTI + C+D V A+ + L
Sbjct: 223 AMEVLDRMLQRDCYPDVIT----------------YTILIEATCRDSGVGHAMKL---LD 263
Query: 663 ECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC--NYLLRSL 715
E + P V L++G+CK G LD A+ +G +P V N +LRS+
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG--CQPNVITHNIILRSM 319
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
D ES + + ++ GE+E + L M + N + P T + G C+ G+ ++A I
Sbjct: 102 DVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE 161
Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLF 717
+L A+ + +I G CK G ++ A+ V + + P V Y +LRSL
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVL-----DRMSVSPDVVTYNTILRSLCD 216
Query: 718 SKDNKKVHAYHLLCRM 733
S K A +L RM
Sbjct: 217 S--GKLKQAMEVLDRM 230
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 175/694 (25%), Positives = 314/694 (45%), Gaps = 29/694 (4%)
Query: 56 KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
KRK A+ + +I++L F+ + ++ + + ++ Y K G +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
A+E MK DV YN +++ R + +M K PN VT++ LI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
NG S GK +A ++L+EM G+ PN T+ +I G EA ++F M+ G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
P V+Y LL+G CK D A +++G +Y+ +IDGL + DEA
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
+M ++ I+PD+V Y +I G + G+ K A +++ + G+ P+ Y+ LI C
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
+G L +A + + + TF +L+ +C+ G V +A++ M G P+
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
F+ LI+G +GE KA +F +M ++G +PT F + ++++ C
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF--------------TYGSLLKGLCKG 591
Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
G + +A K L L D + YN+L+ CK GN+ A+ LF E+ + + PDS TY
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
+LI+GL R + A + G P+ +Y + + ++ ++ +
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG--IYFREQ 709
Query: 594 RDISGRDDESMKS---IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
D G + + + I+ + + G++E L EM + L Y I L G +
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
V + ++ ++ + +C L+ G+C+ L++ + + FI R +
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL-----KAFICRGVEVDR 824
Query: 711 LLRSLLFSK--DNKKVH-AYHLLCRMKSVGYDLD 741
++L SK N +++ A+ L+ M S+G LD
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 164/671 (24%), Positives = 283/671 (42%), Gaps = 74/671 (11%)
Query: 43 NPQVGFRFFIWAAKRKRLRSFASNSAV---ISMLLKPNGFDLYWQTLDELR--SGNVSVV 97
+ ++ +F W K+ L + V +L++ +D L EL SG S V
Sbjct: 49 HGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFV 108
Query: 98 --------------SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
V+ +LI Y + G + +LE F M + P VY NA+L
Sbjct: 109 FGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168
Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
+ + + EM+K P++ TF++LIN L G E + ++ +M + G P
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228
Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
TY V+ C+ R A L MK G D YN L++ C+ R+ + LLR
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288
Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
K P +Y+ LI+G + A +M + P+ V + +I G G
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
K+A+K+ M +G+ P Y L+ G C D AR + + + T+T
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL---FYKME 440
+I G+C+NG +D+A L N+M K G P + ++ALI+G CK G + A + Y++
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
+ N ++ T++ C G + +A +I + G+ D T+N
Sbjct: 469 LSPNGIIY----------------STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512
Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
L+ CK G + A + + + G+ P++V++ LING AF +F +M +
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 572
Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENA 619
G P+ Y SL+ C+ ++ E+FL+ V A
Sbjct: 573 GHHPTFFTYGSLLKGLCK----------------------GGHLREAEKFLKSLHAVPAA 610
Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
+ ++ Y L +C+ G + +A+++F +V+ + + LI G
Sbjct: 611 VDTVM-------------YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 680 LCKRGYLDLAM 690
LC++G +A+
Sbjct: 658 LCRKGKTVIAI 668
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 190/758 (25%), Positives = 318/758 (41%), Gaps = 102/758 (13%)
Query: 59 RLRSFASNSAVISMLLKPNGFD------LYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
R R N + L+ NGF + Q L+E+ S +S F LI G+ G
Sbjct: 290 RKRMIHPNEVTYNTLI--NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347
Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
+ ++AL+ F M+ P Y +L+ + F LA Y M + +T++
Sbjct: 348 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407
Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR-------------- 218
+I+GL K+G + A+ +L+EM++ GI P+ TY+ +I+G C++ R
Sbjct: 408 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467
Query: 219 ---------------------ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
EA R++ M G + D +N L+ CK +V EA
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527
Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
+R DG +P S+ CLI+G + +A++ + +M + P YG +++G
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
L + G +++A K L + DT YN L+ C G L +A SL E+ +R LP+
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647
Query: 378 THTFTILICGMCRNG-------MVDDAQKLFN---------------------------- 402
++T+T LI G+CR G +A+ N
Sbjct: 648 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707
Query: 403 -KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNR- 457
+M+ G P + NA+IDG + G++EK N L +M G N T + L G ++
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767
Query: 458 ------------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
+ DK + ++V C + ++ KIL G D T+
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
N LI+ C G IN A L K + G+ D T +++ L R R +++ + +M +
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
G +P Y L+ CR AF + + + + + ++ L K +
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947
Query: 620 IQGLLEMDFKLNDF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
LL K+ +A +T + C++G V EAL + V+ C + S LI
Sbjct: 948 ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLIT 1007
Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
GLC +G + LA +++ +GF+ L+R LL
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045
Score = 41.2 bits (95), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 35/196 (17%)
Query: 68 AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE------------ 115
A++S+L + + F L E+ +S S + LI+G +VGD +
Sbjct: 864 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Query: 116 -------------KALESFGKMKE----------FDCQPDVYIYNAVLNIAFRKQLFLLA 152
+AL GK E P + + ++++ + + A
Sbjct: 924 KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983
Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
L + M ++V++++LI GL G +A ++ +EM G L N TY +I G
Sbjct: 984 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Query: 213 LCQINRADEAYRLFLK 228
L A + LK
Sbjct: 1044 LLARETAFSGADIILK 1059
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 235/450 (52%), Gaps = 16/450 (3%)
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
E+ ++ F KM + P + ++ VL+ + + + L +++++ M ++ +++++
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
IN L + + +A+ ++ +M + G P+ T + +I+G CQ NR +A L KM++ G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
PD V YN +++G CK+ V++A+ L E+DG +Y+ L+ GL + R+ +A
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
R M I P+V+ + +I + GK +AMKL +M R + PD + YN+LI G C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
G +D+A+ + + + LP+ T+ LI G C++ VD+ KLF +M + G
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
+N +I G +AG + A +F +M+ N + L G C
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYG----------------LCMN 394
Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
+ KA + + +S DI TYN +I+G CK+GN+ A LF+ L KGL+PD V+Y
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
T+I+G R + + + ++ +M ++G P
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 219 bits (557), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 233/443 (52%), Gaps = 16/443 (3%)
Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
+ ++ +M++ LP+IV FS +++ ++KS ++ I + M GI + ++Y IVI+
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
LC+ +R A + KM G PD V ++L+NGFC+ RV +A+ L+ E+ GF P
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
+ Y+ +IDG + ++A + +M + + D V Y ++ GL +G+ DA +L+
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
DM R IVP+ + A+I F G +A L E+ +R P+ T+ LI G+C +G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
VD+A+++ + M GC P V +N LI+G CK+ +++ LF +M +
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM------------A 341
Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
Q G V D + T+++ Y AG A +I ++ P+I TY+ L+ G C +
Sbjct: 342 QRG-LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRV 397
Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
AL LF+ +Q + D TY +I+G+ ++ EDA+ +F + G P Y ++
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 573 MTWSCRRRKFSLAFSLWLQYLRD 595
++ CR+R++ + L+ + D
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQED 480
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 215/472 (45%), Gaps = 58/472 (12%)
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
+E LF KM S P V ++ +L+ K + D ++L E G L SY+ +
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
I+ L R R+ A + KM + EPDVV +I G + +V DA+ L+S M E G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
PD YN +I G C +GL++ A L + + + T+ L+ G+C +G DA +
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
L M P+V F A+ID K G+ +A L+ +M +P +F
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF---------- 280
Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
+ +++ C G + +A ++L + G LPD++TYN+LINGFCK ++ KL
Sbjct: 281 ----TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
F+E+ +GL D++TY T+I G + R + A IF +M P+ Y L+ C
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 393
Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
+ A L+ E +QK E+E + Y
Sbjct: 394 NWRVEKALVLF-------------------ENMQKSEIE---------------LDITTY 419
Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLD 687
I + G+C+ G V++A ++F L CK + P V +I G C++ D
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSL-SCKGL--KPDVVSYTTMISGFCRKRQWD 468
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 203/422 (48%), Gaps = 19/422 (4%)
Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
+E + KM + + P +V + ++ ++++ + L M GI D Y YN +
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
I C A S+ ++ K P+ T + LI G C+ V DA L +KME+ G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
P V ++N +IDG CK G + A LF +ME + G R D + ++V
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRME------------RDGVRA-DAVTYNSLVA 217
Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
C +G A +++ + +P++IT+ ++I+ F K G + A+KL++E+ + + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
D TY +LINGL R ++A ++ M GC P Y +L+ C+ ++ L+
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 590 LQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
+ R + G I+ + Q G + A + MD + N + Y+I L GLC +
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPN---IRTYSILLYGLCMN 394
Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
+V++AL +F + + + + + +IHG+CK G ++ A D+F G L+P V
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG--LKPDVV 452
Query: 709 NY 710
+Y
Sbjct: 453 SY 454
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 216/428 (50%), Gaps = 15/428 (3%)
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A A+++EMV LP+IV F+ L+ + + E I +M GI + +++TI+I
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
C+ +R A + KM G P V + +LL+GFC + R+ +A +L+ K G+ P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+ Y+ LIDGL + + A +M ++ + DVV Y ++ GL +G+ DA ++L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
DM +R I PD + ALI F G LD+A+ L E+ + PN T+ +I G+C +
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
G + DA+K F+ M GCFP+V +N LI G CK +++ LF +M G N +F
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF-- 352
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
+ T++ YC G + A I + PDIIT+ L++G C G
Sbjct: 353 ------------TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
I AL F +++ V Y +I+GL + D+ E A+ +F ++P G P Y
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 571 SLMTWSCR 578
++ C+
Sbjct: 461 IMILGLCK 468
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 184/405 (45%), Gaps = 13/405 (3%)
Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
KM+ + D+Y + +++ R AL+V +M+KL P+IVTF L++G
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
+ A ++ M + G PN Y +I GLC+ + A L +M+ G D V YN
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
LL G C R +A +LR K P + +++ LID + DEA Y++M +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
++P+ V Y +I GL G++ DA K M +G P+ YN LI GFC ++D+
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
L + + T+ LI G C+ G + A +F M P + L+ G
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
LC GE+E A + F M + + + M+ C A + KA++
Sbjct: 396 LCVNGEIESALVKFDDM-------------RESEKYIGIVAYNIMIHGLCKADKVEKAWE 442
Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
+ +L G PD TY +I G CK G A +L + ++ +G+
Sbjct: 443 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 191/392 (48%), Gaps = 15/392 (3%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
F +LI + + AL GKM + +P + + ++L+ A ++ MV
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
K PN+V ++ LI+GL K+G+ +A+++L+EM ++G+ + TY +++GLC R
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
+A R+ M +PD V + AL++ F K +DEA L + + P +Y+ +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
+GL R +A + M + P+VV Y +I G + V + MKL M G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
D + YN LI G+C +G L A + + R P+ T IL+ G+C NG ++ A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVH 459
F+ M ++ + + +N +I GLCKA ++EKA LF ++ + G P
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP-------------- 454
Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
D + M+ C G +A +++ ++ E G
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 158/309 (51%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
V+ LI G K G+ ALE +M++ DV YN +L + A + +M
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
+K + P++VTF+ LI+ K G + A ++ EM Q + PN TY +I+GLC R
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
+A + F M GC P+ V YN L++GFCK R VDE + L + +GF + +Y+ L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
I G + + A + M ++ PD++ + +++ GL G+++ A+ DMRE
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
YN +I G C +++A L + P+ T+TI+I G+C+NG +A +
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Query: 400 LFNKMEKAG 408
L +M++ G
Sbjct: 478 LIRRMKEEG 486
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 214/457 (46%), Gaps = 16/457 (3%)
Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
G + R+++A+A + +M + P +V + ++ + + + + M GI
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
D Y + LI FC L A S+ ++ K P+ TF L+ G C + DA L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
M K+G P+V ++N LIDGLCK GEL A L +ME + G D
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME---------KKGLGA----DV 211
Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
+ T++ C +G A ++L + + PD++T+ +LI+ F K GN++ A +L+KE
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
+ + P++VTY ++INGL R DA + F M GC P+ Y +L++ C+ R
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 582 FSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
L+ + + D + + I + Q G++ A+ M + + + I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
L GLC +G+++ AL F + E + + + +IHGLCK ++ A ++F G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
++P Y + L K+ + A L+ RMK G
Sbjct: 452 --VKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 142/309 (45%), Gaps = 35/309 (11%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+ +I L K ++ + L+E+ + + L++G G A M +
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
PDV + A++++ ++ A +Y EM++ + PN VT++ +INGL G+
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A K D M +G PN TY +ISG C+ DE +LF +M G + D YN L++
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 247 GFCKLRRVDEAL-------------------ALLRSFEKDGFVPR--------------- 272
G+C++ ++ AL LL +G +
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 273 -LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
+ +Y+ +I GL +A + ++A+ + ++ E ++PD Y +MI GL + G ++A +L+
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479
Query: 332 SDMRERGIV 340
M+E GI+
Sbjct: 480 RRMKEEGII 488
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 191/459 (41%), Gaps = 70/459 (15%)
Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
A + SD RE+ L GF + A +L E+ LP+ FT L+
Sbjct: 31 AARAFSDYREK-----------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLT 79
Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP 445
+ KME G + F LI C+ L A ++L M++G P
Sbjct: 80 ATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEP 139
Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
++ + +++ +C I A+ +++ + +SG P+++ YN+LI+G
Sbjct: 140 SI--------------VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
CK G +N AL+L E++ KGL D VTY TL+ GL R DA R+ M + P
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-----------------ISGRDDESMKSIE 608
+ +L+ ++ A L+ + ++ + GR ++ K+ +
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 609 EFLQKGEVENA------IQGLLE---MDFKLNDFQ----------LAPYTIWLIGLCQDG 649
KG N I G + +D + FQ + Y + G CQ G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 650 QVKEALNIFSVLVECKAIVTP---PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
+++ AL+IF +V + VTP C+ L+HGLC G ++ A+ F ++ +
Sbjct: 366 KLRVALDIFCWMVSRR--VTPDIITHCI-LLHGLCVNGEIESALVKFDDMRESEKYIGIV 422
Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
N ++ L K +K A+ L CR+ G DA Y
Sbjct: 423 AYNIMIHGL--CKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 90/173 (52%)
Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
LISG+ K ++ ++ F +M D++ YN +++ + +AL ++ MV
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
P+I+T +L++GL +G+ E A+ D+M + Y I+I GLC+ ++ ++A
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
+ LF ++ G PD Y ++ G CK EA L+R +++G + ++ +
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 222 bits (566), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 152/529 (28%), Positives = 256/529 (48%), Gaps = 17/529 (3%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
++VI +K D + DE+ S +S+ LI+G+ K D AL F KM++
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
P+ ++ ++ + AL Y +M L P++ +I G K K E
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A+K+ DE + G L N F ++S LC+ + DEA L KM+ G P+ V+YN ++
Sbjct: 428 ALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
G C+ + +D A + + + G P +YS LIDG FR A M IE
Sbjct: 487 GHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV 546
Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
+ V+Y +I GL + G+ A +LL++M E+ + YN++I GF G +D A +
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606
Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
E+ PN T+T L+ G+C+N +D A ++ ++M+ G + + ALIDG CK
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 426 AGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
+E A+ LF + +E G NP+ + +++ + G + A +
Sbjct: 667 RSNMESASALFSELLEEGLNPS--------------QPIYNSLISGFRNLGNMVAALDLY 712
Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
++ + G D+ TY +LI+G K GN+ A +L+ E+Q GL PD + Y ++NGL +
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
+ ++F +M +N TP+ +Y +++ R AF L + L
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 165/595 (27%), Positives = 282/595 (47%), Gaps = 27/595 (4%)
Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM-VKLNCLPNIVTFSLL 174
+ALE + E +PD +Y+ + + +A ++ EM K C+P+ T++ +
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
I K G + AI++ DEM GI N T +I+G C+ N A LF KM+ G
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
SP+ V ++ L+ F K +++AL + E G P + +I G + ++++EA
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
+ + FE + +V + ++ L + GK +A +LLS M RGI P+ YN ++ G C
Sbjct: 431 LFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
+D AR + I ++ PN +T++ILI G RN +A ++ N M + +
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
++ +I+GLCK G+ KA L M K RL S ++++ +
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEK------RLCVSC------MSYNSIIDGFFKE 597
Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
G + A ++ +G P++ITY SL+NG CK ++ AL++ E++ KG++ D Y
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
G LI+G + E A +F ++ + G PS +Y SL++ A L+ + L+
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 595 DISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDG 649
D D + + I+ L+ G + A + EM L P YT+ + GL + G
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA----VGLVPDEIIYTVIVNGLSKKG 773
Query: 650 QVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
Q + + +F + K VTP + +I G + G LD A + L G +
Sbjct: 774 QFVKVVKMFEEMK--KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 216/447 (48%), Gaps = 51/447 (11%)
Query: 97 VSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
+++VF ++S K G ++A E KM+ P+V YN V+ R++ LA
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
V+ +++ PN T+S+LI+G ++ + A+++++ MT I N Y +I+GLC
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 215 QINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
++ + +A L M ++ ++YN++++GF K +D A+A +G P +
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
+Y+ L++GL + R D+A +M + ++ D+ YG +I G + ++ A L S+
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679
Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
+ E G+ P YN+LI GF +LG + A L ++ K + T+T LI G+ ++G
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN 739
Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
+ A +L+ +M+ G P ++ +++GL K G+ K +F +M+ KN
Sbjct: 740 LILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK--KNNV------- 790
Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
P+++ YN++I G + GN++
Sbjct: 791 ---------------------------------------TPNVLIYNAVIAGHYREGNLD 811
Query: 514 GALKLFKELQLKGLRPDSVTYGTLING 540
A +L E+ KG+ PD T+ L++G
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 164/313 (52%), Gaps = 9/313 (2%)
Query: 84 QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-----FDCQPDVYIYNA 138
+ ++ + S N+ V V+ +I+G KVG KA E M E C YN+
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS----YNS 589
Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
+++ F++ A+A Y EM PN++T++ L+NGL K+ + + A++M DEM +G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
+ + Y +I G C+ + + A LF ++ + G +P YN+L++GF L + AL
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709
Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
L + KDG LG+Y+ LIDGL + A Y +M + PD ++Y V++ GL
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769
Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
S+ G+ +K+ +M++ + P+ YNA+I G G LD+A L E+ + LP+
Sbjct: 770 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 829
Query: 379 HTFTILICGMCRN 391
TF IL+ G N
Sbjct: 830 ATFDILVSGQVGN 842
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/556 (25%), Positives = 249/556 (44%), Gaps = 67/556 (12%)
Query: 222 AYRLFLKMKDSGCSPDFV----AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
A L K+ DS S F A+N LLN + K R+ D A+ ++ + +P +
Sbjct: 143 ASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVN 202
Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
+ L + EA Y +M ++ D V +++R K +A+++LS ER
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262
Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEI-WKRDSLPNTHTFTILICGMCRNGMVDD 396
G PD+ Y+ ++ C L A SL E+ K+ +P+ T+T +I + G +DD
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 397 AQK-----------------------------------LFNKMEKAGCFPSVGMFNALID 421
A + LF+KMEK G P+ F+ LI+
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 422 GLCKAGELEKANLLFYKMEI-GKNPTLF--LRLSQG--GNRVHDKA-------------- 462
K GE+EKA + KME+ G P++F + QG + H++A
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLAN 442
Query: 463 --SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
T++ C G +A ++L ++ G P++++YN+++ G C+ N++ A +F
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
+ KGL+P++ TY LI+G R E++A + M + + VY++++ C+
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 581 KFSLAFSLWLQYLRD----ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
+ S A L + + +S S+ I+ F ++GE+++A+ EM +
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSI--IDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
YT + GLC++ ++ +AL + + + P+ LI G CKR ++ A +F
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 697 LKNGFILRPRVCNYLL 712
L+ G + N L+
Sbjct: 681 LEEGLNPSQPIYNSLI 696
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 1/263 (0%)
Query: 56 KRKRL-RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
+ KRL S S +++I K D +E+ +S + L++G K
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
++ALE +MK + D+ Y A+++ ++ A A++ E+++ P+ ++ L
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
I+G G A+ + +M + G+ + TYT +I GL + A L+ +M+ G
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
PD + Y ++NG K + + + + +K+ P + Y+ +I G +R DEA+
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 815
Query: 295 WYRKMFEEKIEPDVVLYGVMIRG 317
+ +M ++ I PD + +++ G
Sbjct: 816 LHDEMLDKGILPDGATFDILVSG 838
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/575 (27%), Positives = 265/575 (46%), Gaps = 52/575 (9%)
Query: 19 EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN-SAVISMLLKPN 77
E ALE L + V S++ V +FF WA KR+ + S +I L +
Sbjct: 81 EKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEAR 140
Query: 78 GFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
+ ++T+ E+ R+ VSV V L+ + KAL F + K C+P Y
Sbjct: 141 LYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTY 200
Query: 137 NAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
N+V+ + ++ VY EM + +C P+ +T+S LI+ K G+ + AI++ DEM
Sbjct: 201 NSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK 260
Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
+ P + YT ++ ++ + ++A LF +MK +GCSP Y L+ G K RVD
Sbjct: 261 DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVD 320
Query: 256 EALALLRSFEKDGFVP-------------RLG----------------------SYSCLI 280
EA + +DG P ++G SY+ +I
Sbjct: 321 EAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVI 380
Query: 281 DGLFRAKRY-DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
LF +K + E +W+ KM + + P Y ++I G + +V+ A+ LL +M E+G
Sbjct: 381 KALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 440
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
P Y +LI + A L E+ + ++ + ++I + G + +A
Sbjct: 441 PPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
LFN+M+ G P V +NAL+ G+ KAG + +AN L KME + G R
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME------------ENGCRA- 547
Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
D S ++ + G+ +A ++ + SG PD +TYN+L+ F G A ++
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
+E++ KG D++TY ++++ + VD E+D F
Sbjct: 608 REMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 225/475 (47%), Gaps = 49/475 (10%)
Query: 4 TLNEVLTILDTVTPIEPA-LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS 62
T+ EV + +T + PA L L+ L + + S + F A RK +
Sbjct: 148 TIQEV--VRNTYVSVSPAVLSELVKALGRAKMVSKALSV---------FYQAKGRKCKPT 196
Query: 63 FASNSAVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
++ ++VI ML++ + + E+ G+ + + LIS Y K+G + A+ F
Sbjct: 197 SSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLF 256
Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
+MK+ QP IY +L I F+ AL ++ EM + C P + T++ LI GL K+
Sbjct: 257 DEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKA 316
Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
G+ + A +M + G+ P+ +++ L ++ R +E +F +M C+P V+Y
Sbjct: 317 GRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSY 376
Query: 242 NA------------------------------------LLNGFCKLRRVDEALALLRSFE 265
N L++G+CK RV++AL LL +
Sbjct: 377 NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMD 436
Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
+ GF P +Y LI+ L +AKRY+ A ++++ E +Y VMI+ + GK+
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
+A+ L ++M+ +G PD Y YNAL+ G G++++A SL ++ + + ++ I++
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
G R G+ A ++F ++ +G P +N L+ AG E+A + +M+
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/547 (21%), Positives = 231/547 (42%), Gaps = 58/547 (10%)
Query: 205 TYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
TY +I L + E YR ++ +++ S + L+ + + V +AL++
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAG 322
+ P +Y+ +I L + ++++ + Y +M E PD + Y +I + G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247
Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
+ A++L +M++ + P Y L+ + +G +++A L E+ + P +T+T
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307
Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
LI G+ + G VD+A + M + G P V N L++ L K G +E+ +F +M +
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMW 367
Query: 443 K-NPTLFLRLSQGGNRVHDKASLQTMVEQ-YCTAGLIHKAYKILMQLAESGNLPDIITYN 500
+ PT+ S T+++ + + + + ++ P TY+
Sbjct: 368 RCTPTV--------------VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
LI+G+CK + AL L +E+ KG P Y +LIN L + R E A +F ++ +N
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
S VY + I+ F + G++ A+
Sbjct: 474 FGNVSSRVYAVM----------------------------------IKHFGKCGKLSEAV 499
Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIH 678
EM + + + Y + G+ + G + EA ++ + E C+A + + + ++
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII--LN 557
Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
G + G A+++F +G ++P Y F+ A ++ MK G+
Sbjct: 558 GFARTGVPRRAIEMFETIKHSG--IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Query: 739 DLDACLY 745
+ DA Y
Sbjct: 616 EYDAITY 622
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/617 (26%), Positives = 279/617 (45%), Gaps = 45/617 (7%)
Query: 33 TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL-RS 91
TV + + V FF WA ++ R F LY T D L +
Sbjct: 96 TVVASLASESGSMVALCFFYWAVGFEKFRHF---------------MRLYLVTADSLLAN 140
Query: 92 GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
GN+ +V ++ + ++G +A+ M+ P N VL IA L
Sbjct: 141 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEY 200
Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
A V+ EM +P+ ++ L++ G + GK + A + L M QRG +P+ T T++++
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
LC+ + A F KM D G P+ + + +L++G CK + +A +L ++G+ P
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
+ +++ LIDGL + ++A+ + K+ + +P+V Y MI G + K+ A L
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
S M+E+G+ P+ Y LI G C G +A L + +PN +T+ I +C+
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
+A +L NK G + LI CK ++ +A F +M N T F
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM----NKTGF-- 494
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
+ R+++ ++ +C + ++ ++ + G +P TY S+I+ +CK G
Sbjct: 495 --EADMRLNN-----ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
+I+ ALK F ++ G PDS TYG+LI+GL + ++A +++ M G +P
Sbjct: 548 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 607
Query: 571 SLMTWSCRRRKFSLAF--------SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
+L C+R + A LW++ +R + R S K + G Q
Sbjct: 608 TLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLV-RKLCSEKKV------GVAALFFQK 660
Query: 623 LLEMDFKLNDFQLAPYT 639
LLE D + LA +T
Sbjct: 661 LLEKDSSADRVTLAAFT 677
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 208/465 (44%), Gaps = 58/465 (12%)
Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
+L F ++ R++EA+ ++ + G P + +C+++ + A + +M
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
+ PD Y +M+ G GK+++A + L+ M +RG +PD ++ C+ GL+++A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA- 271
Query: 364 SLQVEIWKRDSL------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
IW + PN FT LI G+C+ G + A ++ +M + G P+V
Sbjct: 272 -----IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
ALIDGLCK G EKA LF K+ +R VH S M+ YC +
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKL---------VRSDTYKPNVHTYTS---MIGGYCKEDKL 374
Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
++A + ++ E G P++ TY +LING CK G+ A +L + +G P+ TY
Sbjct: 375 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
I+ L + R +A+ + + G Y L+ C++ + A + + + + +
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM--NKT 492
Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
G E D +LN+ +A + C+ ++KE+ +
Sbjct: 493 G-------------------------FEADMRLNNILIAAF-------CRQKKMKESERL 520
Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
F ++V I T + +I CK G +DLA+ F ++G +
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 148/354 (41%), Gaps = 48/354 (13%)
Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
G +++A + M+ G PS N +++ + G +E A +F +M +
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR--------- 211
Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
V D +S + MV G I +A + L + + G +PD T ++ C+ G
Sbjct: 212 ----GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
+N A+ F+++ G +P+ + + +LI+GL + + AF + +M +NG P+ + +
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
L+ C+R AF L+L+ +R + +K N
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDT------------------------------YKPN 357
Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
+ YT + G C++ ++ A +FS + E + LI+G CK G A +
Sbjct: 358 ---VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
+ GF+ N + SL K ++ AY LL + S G + D Y
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSL--CKKSRAPEAYELLNKAFSCGLEADGVTY 466
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 233/461 (50%), Gaps = 18/461 (3%)
Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI-YNAVLNIAFRKQLFLLALAVYYEM 159
FF L G+ KAL SF ++ + + Y +L F AL ++ M
Sbjct: 5 FFQLHRNRLVKGNSGKAL-SFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHM 63
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
V+ LP+I+ F+ L+N ++K K +V I + D + G+ + +T ++++ CQ ++
Sbjct: 64 VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQP 123
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
A KM G PD V + +L+NGFC R++EA++++ + G P + Y+ +
Sbjct: 124 YLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTI 183
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
ID L + + A + + +M I PDVV+Y ++ GL +G+ +DA LL M +R I
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
PD +NALI F G A L E+ + PN T+T LI G C G VD+A++
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
+F ME GCFP V + +LI+G CK +++ A +FY+M SQ G
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM------------SQKG-LTG 350
Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
+ + T+++ + G + A ++ + G P+I TYN L++ C G + AL +F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 520 KELQ---LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
+++Q + G+ P+ TY L++GL + E A +F M
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 215/469 (45%), Gaps = 70/469 (14%)
Query: 113 DCEKALESFGKMKEFDC-------------QPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
D K L KMK+FD D+Y N ++N + LA + +M
Sbjct: 74 DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
+KL P+IVTF+ LING + E A+ M+++M + GI P+ YT +I LC+
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
+ A LF +M++ G PD V Y +L+NG C R +A +LLR K P + +++ L
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEP--------------------------------- 306
ID + ++ +A Y +M I P
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 307 --DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
DVV Y +I G + KV DAMK+ +M ++G+ +T Y LI+GF +G + A+
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA---GCFPSVGMFNALID 421
+ + R PN T+ +L+ +C NG V A +F M+K G P++ +N L+
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 422 GLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
GLC G+LEKA ++F M E+ + + QG C AG +
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG----------------MCKAGKVK 477
Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
A + L G P+++TY ++I+G + G + A LF++++ G+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 186/344 (54%), Gaps = 3/344 (0%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
++ +I K G AL F +M+ + +PDV +Y +++N + A ++ M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
K P+++TF+ LI+ K GK A ++ +EM + I PN FTYT +I+G C
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
DEA ++F M+ GC PD VAY +L+NGFCK ++VD+A+ + + G +Y+ L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER-- 337
I G + + + A + M + P++ Y V++ L GKVK A+ + DM++R
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 338 -GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
G+ P+ + YN L+ G C G L++A + ++ KR+ T+TI+I GMC+ G V +
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
A LF + G P+V + +I GL + G +A++LF KM+
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 235/518 (45%), Gaps = 46/518 (8%)
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
+EA LF M +S P + + LLN K+++ D + L + G L + + L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
++ ++ + A ++ KM + EPD+V + +I G ++++AM +++ M E GI
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
PD Y +I C G ++ A SL ++ P+ +T L+ G+C +G DA
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
L M K P V FNALID K G+ A L+ +M +R+S N
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM---------IRMSIAPNIF- 283
Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
+ +++ +C G + +A ++ + G PD++ Y SLINGFCK ++ A+K+F
Sbjct: 284 ---TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
E+ KGL +++TY TLI G +V + A +F M G P+ Y L+ C
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
K A ++ E +QK E++ + Y
Sbjct: 401 GKVKKALMIF-------------------EDMQKREMDGVAPNIW------------TYN 429
Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
+ L GLC +G++++AL +F + + + + + +I G+CK G + A+++F
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
G ++P V Y ++ K A+ L +MK G
Sbjct: 490 G--VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 202/459 (44%), Gaps = 50/459 (10%)
Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
F Y +L + +EAL L + +P + ++ L++ + + K++D
Sbjct: 37 FCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCD 96
Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
+ + D+ +++ ++ + A L M + G PD + +LI GFC
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
+++A S+ ++ + P+ +T +I +C+NG V+ A LF++ME G P V M+
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
+L++GLC +G A+ L M K D + +++ + G
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKP-------------DVITFNALIDAFVKEGKF 263
Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
A ++ ++ P+I TY SLINGFC G ++ A ++F ++ KG PD V Y +L
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
ING + + +DA +IF +M Q G T + Y +L
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL------------------------- 358
Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
I+ F Q G+ A + M + + Y + L LC +G+VK+AL I
Sbjct: 359 ---------IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 658 FSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVF 693
F + + + P+ L+HGLC G L+ A+ VF
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 170/345 (49%), Gaps = 3/345 (0%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+ +I L K + D++ + + ++ L++G G A M +
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
+PDV +NA+++ ++ FL A +Y EM++++ PNI T++ LING G +
Sbjct: 241 RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDE 300
Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
A +M M +G P+ YT +I+G C+ + D+A ++F +M G + + + Y L+
Sbjct: 301 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE- 305
GF ++ + + A + G P + +Y+ L+ L + +A + M + +++
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420
Query: 306 --PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
P++ Y V++ GL GK++ A+ + DMR+R + Y +I+G C G + A
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
+L + + PN T+T +I G+ R G+ +A LF KM++ G
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 140/288 (48%), Gaps = 3/288 (1%)
Query: 55 AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
KRK + +A+I +K F + +E+ +++ + LI+G+ G
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
++A + F M+ C PDV Y +++N + + A+ ++YEM + N +T++ L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD--- 231
I G + GK VA ++ M RG+ PN TY +++ LC + +A +F M+
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
G +P+ YN LL+G C ++++AL + K + +Y+ +I G+ +A +
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
A + + + ++P+VV Y MI GL G +A L M+E G+
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 38/207 (18%)
Query: 67 SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
+++I+ K D + E+ ++ + + LI G+ +VG A E F M
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN---CLPNIVTFSLLINGLSKSGK 183
P++ YN +L+ AL ++ +M K PNI T+++L++GL +GK
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 184 TEVAIKMLDEMTQR-----------------------------------GILPNKFTYTI 208
E A+ + ++M +R G+ PN TYT
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 209 VISGLCQINRADEAYRLFLKMKDSGCS 235
+ISGL + EA+ LF KMK+ G S
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 248/521 (47%), Gaps = 13/521 (2%)
Query: 50 FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
F + + L S S S + + F+L +L ++ ++I+ +
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
+ A GK+ + +PD +N ++ F + A+ + MV+ C P++V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
T++ ++NG+ +SG T +A+ +L +M +R + + FTY+ +I LC+ D A LF +M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
+ G V YN+L+ G CK + ++ LL+ VP + +++ L+D + +
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
EA Y++M I P+++ Y ++ G ++ +A +L M PD + +L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
IKG+C + +D + I KR + N T++IL+ G C++G + A++LF +M G
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
P V + L+DGLC G+LEKA +F ++ K + + T++E
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT-------------TIIE 481
Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
C G + A+ + L G P+++TY +I+G CK G+++ A L ++++ G P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
+ TY TLI R + ++ +M G + + K
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 256/514 (49%), Gaps = 16/514 (3%)
Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSL 173
+ A+ F +M P + ++ + R + F L L + + ++LN + NI T ++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNI 128
Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
+IN + KT A +L ++ + G P+ T+ +I GL + EA L +M ++G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
C PD V YN+++NG C+ AL LLR E+ + +YS +ID L R D A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
+ +++M + I+ VV Y ++RGL +AGK D LL DM R IVP+ +N L+ F
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
G L +A L E+ R PN T+ L+ G C + +A + + M + C P +
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
F +LI G C ++ M++ +N +S+ G V + + +V+ +C
Sbjct: 369 VTFTSLIKGYCMVKRVDDG------MKVFRN------ISKRG-LVANAVTYSILVQGFCQ 415
Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
+G I A ++ ++ G LPD++TY L++G C G + AL++F++LQ + V
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
Y T+I G+ + + EDA+ +F +P G P+ Y +++ C++ S A L +
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 594 RDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
D + +D + + I L+ G++ + + + EM
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 259/566 (45%), Gaps = 61/566 (10%)
Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
K + AI + EM + LP+ ++ S + + + + +++ +G + + N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
++N FC+ + A ++L K G+ P +++ LI GLF + EA +M E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
+PDVV Y ++ G+ +G A+ LL M ER + D + Y+ +I C G +D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
SL E+ + + T+ L+ G+C+ G +D L M P+V FN L+D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 423 LCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
K G+L++AN L+ +M G +P + + T+++ YC + +A
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNII--------------TYNTLMDGYCMQNRLSEAN 353
Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
+L + + PDI+T+ SLI G+C V ++ +K+F+ + +GL ++VTY L+ G
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
+ + + A +F +M +G P Y L+ C K A ++
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF------------ 461
Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
E LQK ++ D + YT + G+C+ G+V++A N+F L
Sbjct: 462 -------EDLQKSKM---------------DLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 662 VECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLL 716
CK + P+ + +I GLCK+G L A + ++G P C Y L+R+ L
Sbjct: 500 -PCKGV--KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN--APNDCTYNTLIRAHL 554
Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDA 742
+D + L+ MKS G+ DA
Sbjct: 555 --RDGDLTASAKLIEEMKSCGFSADA 578
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 238/538 (44%), Gaps = 56/538 (10%)
Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
SG+ I + D+A LF +M S P V ++ + + ++ + L + E +G
Sbjct: 62 SGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
+ + + +I+ R + AY+ K+ + EPD + +I+GL GKV +A+ L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
+ M E G PD YN+++ G C G A L ++ +R+ + T++ +I +CR
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTL 447
+G +D A LF +ME G SV +N+L+ GLCKAG+ LL M EI N
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
F +++ + G + +A ++ ++ G P+IITYN+L++G+C
Sbjct: 301 F----------------NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
++ A + + PD VT+ +LI G V R +D ++F + + G +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
Y L+ C+ K LA EE Q E G+L
Sbjct: 405 TYSILVQGFCQSGKIKLA----------------------EELFQ----EMVSHGVLP-- 436
Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
+ Y I L GLC +G++++AL IF L + K + +I G+CK G ++
Sbjct: 437 ------DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
A ++F G ++P V Y + K A LL +M+ G + C Y
Sbjct: 491 DAWNLFCSLPCKG--VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 196/428 (45%), Gaps = 5/428 (1%)
Query: 5 LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
++E + ++D + +E +P ++ ++ + I ++ + + +R
Sbjct: 174 VSEAVVLVDRM--VENGCQP--DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Query: 65 SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
+ S +I L + D E+ + + + L+ G K G M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
+ P+V +N +L++ ++ A +Y EM+ PNI+T++ L++G +
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
A MLD M + P+ T+T +I G C + R D+ ++F + G + V Y+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
+ GFC+ ++ A L + G +P + +Y L+DGL + ++A + + + K+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
+ +V+Y +I G+ + GKV+DA L + +G+ P+ Y +I G C G L +A
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
L ++ + + PN T+ LI R+G + + KL +M+ G +ID L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Query: 425 KAGELEKA 432
+GEL+K+
Sbjct: 590 -SGELDKS 596
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 248/501 (49%), Gaps = 31/501 (6%)
Query: 40 KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
KT + + F+ I A R + ++ + +I + K + +E++ + +
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTY---NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
+ +I G+ KVG + + F +MK+ C+PDV YNA++N + + L Y EM
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
PN+V++S L++ K G + AIK +M + G++PN++TYT +I C+I
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
+A+RL +M G + V Y AL++G C R+ EA L + G +P L SY+ L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
I G +AK D A ++ I+PD++LYG I GL K++ A ++++M+E GI
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 340 VPDTYCYNALIKGFCDLG-------LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
++ Y L+ + G LLD+ + L +E+ TF +LI G+C+N
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV-------TVVTFCVLIDGLCKNK 591
Query: 393 MVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
+V A FN++ G + +F A+IDGLCK ++E A TLF ++
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT------------TLFEQM 639
Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
Q G V D+ + ++++ G + +A + ++AE G D++ Y SL+ G
Sbjct: 640 VQKG-LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Query: 512 INGALKLFKELQLKGLRPDSV 532
+ A +E+ +G+ PD V
Sbjct: 699 LQKARSFLEEMIGEGIHPDEV 719
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 167/690 (24%), Positives = 318/690 (46%), Gaps = 46/690 (6%)
Query: 19 EPALEPLLPF-LSKTTVTSVIMKTK-NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKP 76
+P LE L L+ V V+++ K +P++ F+FF W+ R + + +++ +L
Sbjct: 95 DPGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFC 154
Query: 77 NGFDLYWQTLDELRSGNVSVVS-DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
+Y+ L+ +S DVF VL S C P +
Sbjct: 155 A--RMYYDANSVLKEMVLSKADCDVFDVLWSTRNV------------------CVPGFGV 194
Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
++A+ ++ + A+ + +M + P + + L++ +K GKT+ + +M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
G P FTY I+I +C+ + A LF +MK G PD V YN++++GF K+ R+D
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
+ + + P + +Y+ LI+ + + +YR+M ++P+VV Y ++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
+ G ++ A+K DMR G+VP+ Y Y +LI C +G L A L E+ +
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
N T+T LI G+C + +A++LF KM+ AG P++ +NALI G KA +++A L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 436 FYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
+++ G P L L T + C+ I A ++ ++ E G
Sbjct: 495 LNELKGRGIKPDLLL--------------YGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
+ + Y +L++ + K GN L L E++ + VT+ LI+GL + A F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 555 GQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQ 612
++ + G + A++ +++ C+ + A +L+ Q ++ D + S+ + +
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Query: 613 KGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
+G V A+ + E+ KL+ L YT + GL Q+++A + ++
Sbjct: 661 QGNVLEALALRDKMAEIGMKLD---LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
C+ ++ + G +D A+++ Y +K+
Sbjct: 718 EVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 136/283 (48%), Gaps = 9/283 (3%)
Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
LI G+ K + ++ALE ++K +PD+ +Y + + A V EM +
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
N + ++ L++ KSG + +LDEM + I T+ ++I GLC+ +A
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 224 RLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
F ++ D G + + A+++G CK +V+ A L + G VP +Y+ L+DG
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
F+ EA A KM E ++ D++ Y ++ GLS +++ A L +M GI PD
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKR--------DSLPN 377
+++K +LG +D+A LQ + K ++LPN
Sbjct: 718 EVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPN 760
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 180/686 (26%), Positives = 310/686 (45%), Gaps = 71/686 (10%)
Query: 37 VIMKTKNPQVGFRFF-IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVS 95
V+ K NP+V + ++ +LRS +S + LK N ++ Q +D SG
Sbjct: 19 VVRKLLNPRVYSKLVNAFSETETKLRSLCEDS---NPQLK-NAVSVFQQAVD---SG--- 68
Query: 96 VVSDVFFV---LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN--IAFRKQLFL 150
S + F L++ + + E A + KM E D + + +L + RK F
Sbjct: 69 --SSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGF- 125
Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
A V M+K N+ ++L+ GL ++ + A+ +L EM + ++P+ F+Y VI
Sbjct: 126 -AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI 184
Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
G C+ ++A L +MK SGCS V + L++ FCK ++DEA+ L+ + G
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
L Y+ LI G D A + ++ E P + Y +IRG + G++K+A ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
M ERG+ P+ Y Y LI G C +G +A L + ++D PN T+ I+I +C+
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
+G+V DA ++ M+K P +N L+ GLC G+L++A+ L Y M
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM----------- 413
Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
L D S ++ C +H+A I L E D +T N L+N K G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
++N A++L+K++ + +S TY +I+G + A + +M + PS Y
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
L++ C+ A+ L+ + RD
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRD----------------------------------- 558
Query: 631 NDF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKRGYLD 687
N+F + + I + G + G +K A ++ + +A ++P + KLI+ K GYLD
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM--SRAGLSPDLFTYSKLINRFLKLGYLD 616
Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLR 713
A+ F + +GF +C+ +L+
Sbjct: 617 EAISFFDKMVDSGFEPDAHICDSVLK 642
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/578 (26%), Positives = 262/578 (45%), Gaps = 56/578 (9%)
Query: 38 IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVIS--MLLKPNGFDLYWQTLDELRSGNVS 95
+++++N ++ F F+ + +F S S ++ + ++ GF L R +
Sbjct: 82 LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141
Query: 96 VVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
V + +L+ G + +C KA+ +M+ PDV+ YN V+ + AL +
Sbjct: 142 VYN--HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALEL 199
Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
EM C ++VT+ +LI+ K+GK + A+ L EM G+ + YT +I G C
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
D LF ++ + G SP + YN L+ GFCKL ++ EA + + G P + +
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
Y+ LIDGL + EA M E+ EP+ V Y ++I L + G V DA++++ M+
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL--PNTHTFTILICGMCRN-- 391
+R PD YN L+ G C G LD+A L + K S P+ ++ LI G+C+
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 392 ---------------------------------GMVDDAQKLFNKMEKAGCFPSVGMFNA 418
G V+ A +L+ ++ + + + A
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 419 LIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
+IDG CK G L A L KM + + P++F ++ C G +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVF--------------DYNCLLSSLCKEGSL 545
Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
+A+++ ++ N PD++++N +I+G K G+I A L + GL PD TY L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
IN ++ ++A F +M +G P + S++ +
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 212/443 (47%), Gaps = 17/443 (3%)
Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
V+ LI G+ G+ ++ F ++ E P YN ++ + A ++ M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
++ PN+ T++ LI+GL GKT+ A+++L+ M ++ PN TY I+I+ LC+
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV--PRLGSYS 277
+A + MK PD + YN LL G C +DEA LL KD P + SY+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428
Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
LI GL + R +A Y + E+ D V +++ +AG V AM+L + +
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
IV ++ Y A+I GFC G+L+ A+ L ++ + P+ + L+ +C+ G +D A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGN 456
+LF +M++ FP V FN +IDG KAG+++ A L M G +P LF
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF-------- 600
Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
+ ++ ++ G + +A ++ +SG PD +S++ G +
Sbjct: 601 ------TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 517 KLFKELQLKGLRPDSVTYGTLIN 539
+L K+L K + D T+++
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMD 677
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 1/273 (0%)
Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
PDV YNA+++ ++ AL +Y +V+ + VT ++L+N K+G A++
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
+ +++ I+ N TYT +I G C+ + A L KM+ S P YN LL+ C
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
K +D+A L ++D P + S++ +IDG +A A + M + PD+
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
Y +I + G + +A+ M + G PD + ++++K G D+ L ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Query: 370 WKRDSLPNTHTFTILICGMCRNGM-VDDAQKLF 401
+D + + ++ MC + +D A++L
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 278,765,353
Number of Sequences: 539616
Number of extensions: 11666009
Number of successful extensions: 41613
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 26233
Number of HSP's gapped (non-prelim): 3762
length of query: 767
length of database: 191,569,459
effective HSP length: 125
effective length of query: 642
effective length of database: 124,117,459
effective search space: 79683408678
effective search space used: 79683408678
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)