Your job contains 1 sequence.
>047308
MATLAPSLAFRPCCFNCGAVESSPPSKLCAASASASHYVFKSKCTRRPARLEVEKTLSAQ
VCQNAVTTRPDFRACASSSRVSVDETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVSVG
EKNVNYAVTIDVSSLQTTRGGHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIETPFT
PTSFDTFALELGFEAKQTPFYLSFLLKSPLRDGSGDFEIRNHLSAKFCVPVGLNAGVPSP
MGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMEST
WNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEP
DFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNA
ILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVV
FTRTADGALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFC
FINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWA
ELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVS
FSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSW
GSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIDWHGSDHSPPRWEDPDCK
FLAMRLKVDKAESQLSSESSQTKGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPF
PGFFSTEGKPVLEQMAGLYTYEMKPYSCTLFEASNGND
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047308
(878 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2014500 - symbol:DBE1 "debranching enzyme 1" s... 2515 2.3e-261 1
TAIR|locus:2061216 - symbol:ISA1 "isoamylase 1" species:3... 375 5.2e-82 3
TAIR|locus:2122343 - symbol:ISA3 "isoamylase 3" species:3... 617 3.8e-60 1
UNIPROTKB|Q8EGU6 - symbol:glgX "Glycogen isoamylase GlgX"... 400 1.6e-46 2
TIGR_CMR|SO_1495 - symbol:SO_1495 "glycogen operon protei... 400 1.6e-46 2
UNIPROTKB|P15067 - symbol:glgX species:83333 "Escherichia... 372 4.8e-31 1
UNIPROTKB|Q9KKS1 - symbol:VC_A1029 "Glycogen operon prote... 362 6.2e-30 1
TIGR_CMR|VC_A1029 - symbol:VC_A1029 "glycogen operon prot... 362 6.2e-30 1
ZFIN|ZDB-GENE-110914-16 - symbol:si:ch211-247m23.1 "si:ch... 162 4.1e-08 1
TIGR_CMR|GSU_2358 - symbol:GSU_2358 "isoamylase family pr... 153 3.8e-07 1
ZFIN|ZDB-GENE-110411-171 - symbol:si:ch211-213e17.1 "si:c... 152 5.6e-07 1
ASPGD|ASPL0000046871 - symbol:AN2314 species:162425 "Emer... 150 9.1e-07 1
DICTYBASE|DDB_G0274105 - symbol:glgB "branching enzyme" s... 155 1.3e-06 2
TIGR_CMR|BA_2728 - symbol:BA_2728 "pullulanase, putative"... 146 2.1e-06 2
UNIPROTKB|F1SK65 - symbol:F1SK65 "Uncharacterized protein... 141 2.2e-06 1
UNIPROTKB|E1C303 - symbol:GBE1 "Uncharacterized protein" ... 141 6.9e-06 1
UNIPROTKB|G4NAD9 - symbol:MGG_03186 "1,4-alpha-glucan-bra... 151 7.5e-06 2
UNIPROTKB|F1PX32 - symbol:GBE1 "Uncharacterized protein" ... 141 8.8e-06 1
CGD|CAL0000583 - symbol:GLC3 species:5476 "Candida albica... 151 8.9e-06 2
TAIR|locus:2044903 - symbol:SBE2.1 "starch branching enzy... 142 9.0e-06 1
SGD|S000000737 - symbol:GLC3 "Glycogen branching enzyme, ... 133 6.5e-05 1
UNIPROTKB|F1MZP0 - symbol:GBE1 "Uncharacterized protein" ... 130 0.00012 1
UNIPROTKB|E9PGM4 - symbol:GBE1 "1,4-alpha-glucan-branchin... 130 0.00013 1
UNIPROTKB|Q04446 - symbol:GBE1 "1,4-alpha-glucan-branchin... 130 0.00014 1
MGI|MGI:1921435 - symbol:Gbe1 "glucan (1,4-alpha-), branc... 130 0.00014 1
TIGR_CMR|CPS_0996 - symbol:CPS_0996 "alpha amylase family... 112 0.00017 3
RGD|1309968 - symbol:Gbe1 "glucan (1,4-alpha-), branching... 127 0.00020 1
FB|FBgn0053138 - symbol:AGBE "1,4-Alpha-Glucan Branching ... 125 0.00063 2
TAIR|locus:2144608 - symbol:SBE2.2 "starch branching enzy... 135 0.00087 2
>TAIR|locus:2014500 [details] [associations]
symbol:DBE1 "debranching enzyme 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0004556 "alpha-amylase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0019156 "isoamylase activity" evidence=IDA;IMP] [GO:0010021
"amylopectin biosynthetic process" evidence=IMP] [GO:0000023
"maltose metabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00152 InterPro:IPR013780
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AC005278 GO:GO:0010021 GO:GO:0019252
eggNOG:COG1523 HOGENOM:HOG000239197 BRENDA:3.2.1.68 GO:GO:0019156
EMBL:AY139980 IPI:IPI00531675 PIR:F86164 RefSeq:NP_171830.1
RefSeq:NP_973751.1 UniGene:At.24041 ProteinModelPortal:Q8L735
SMR:Q8L735 STRING:Q8L735 PaxDb:Q8L735 PRIDE:Q8L735
EnsemblPlants:AT1G03310.1 EnsemblPlants:AT1G03310.2 GeneID:839531
KEGG:ath:AT1G03310 TAIR:At1g03310 InParanoid:Q9ZVT2 OMA:LNMGDEC
PhylomeDB:Q8L735 ProtClustDB:CLSN2679656 Genevestigator:Q8L735
Uniprot:Q8L735
Length = 882
Score = 2515 (890.4 bits), Expect = 2.3e-261, P = 2.3e-261
Identities = 500/898 (55%), Positives = 625/898 (69%)
Query: 1 MATLAPSLAFRPCCFNCGAVES--SPPSKLCAASASASHYVFKSKCTRRPARLEVEKTLS 58
MA +PS+ CC N G + P ++L + K K K
Sbjct: 1 MAAWSPSVGIGSCCLNNGITRTWKFPSARLFTGRKN------KIKLGSETLMF-TRKRFM 53
Query: 59 AQVCQNAVTTRPDFRACASSSRVSVDETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVS 118
+ +A+ + + CAS + S++ + + + E D+L+KV++Y FRT G LV V
Sbjct: 54 GDLVTSALQSYQFSKICAS--KTSIELREALSSRRAEADDLKKVTSYSFRTKAGALVKVK 111
Query: 119 VGEKNVNYAVTIDVSSLQTTRGGHK--LVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIE 176
V +K Y++ + VSSL+ + G K LV++WGVY SDSS ++ L + + D++T + E
Sbjct: 112 VEKKREKYSILVYVSSLELS-GDDKSRLVMVWGVYRSDSSCFLPLDFENSSQDSQTHTTE 170
Query: 177 TPFTPTSFDTFALELGFEAKQTPFYLSFLLKSPL-RDGSGDFEIRNHLSAKFCVPVGLNA 235
T F +S L L F+ K++PFYLSF LK RD G E+ H FC+PVG A
Sbjct: 171 TTFVKSSLSELMLGLEFDGKESPFYLSFHLKLVSGRDPDGQ-EMLTHRDTDFCIPVGFTA 229
Query: 236 GVPSPMGLSFSTDG-SLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWH 294
G P P+GLS D S NF+ FSR + VVLCLYDD+T D+PALELDLDPY+NR+GD+WH
Sbjct: 230 GHPLPLGLSSGPDDDSWNFSFFSRSSTNVVLCLYDDSTTDKPALELDLDPYVNRTGDVWH 289
Query: 295 ASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLG 354
AS+++TW+FV YGYR K + + E ++LDPYA ++ S+ KYLG
Sbjct: 290 ASVDNTWDFVRYGYRCKETAHSKEDVDVEGEPIVLDPYATVVGKSVSQ--------KYLG 341
Query: 355 RLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLK 414
L K P FDWG DV N+P+EKL+VYRLNV F++H+SSKLP ++AGTFSGV EKV HLK
Sbjct: 342 SLSKSPSFDWGEDVSPNIPLEKLLVYRLNVKGFTQHRSSKLPSNVAGTFSGVAEKVSHLK 401
Query: 415 DLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIE 474
LG NA+LLEPI SF EQKGPYFP HFFSP ++GPS SA+NSMK MVKKLH+ GIE
Sbjct: 402 TLGTNAVLLEPIFSFSEQKGPYFPFHFFSPMDIYGPSNSLESAVNSMKVMVKKLHSEGIE 461
Query: 475 VLLEVVFTRTAD-GALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTE 533
VLLEVVFT TAD GAL+GIDDSSYYY R +++ + LNCNYP VQQ++L SLR+WVTE
Sbjct: 462 VLLEVVFTHTADSGALRGIDDSSYYYKGRANDLDSKSYLNCNYPVVQQLVLESLRYWVTE 521
Query: 534 FHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRF 593
FH+DGFCFINASSLLRG HGE LSRPPL+EAIAFDPLL++ KLIAD WDP + PK+ RF
Sbjct: 522 FHVDGFCFINASSLLRGVHGEQLSRPPLVEAIAFDPLLAETKLIADCWDPLEMMPKEVRF 581
Query: 594 PHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGL 653
PHWKRWAELNT +C +VRNF RG G+LSDLATR+CGSGD+F+DGRGPAFSFNYI+RN+GL
Sbjct: 582 PHWKRWAELNTRYCRNVRNFLRGRGVLSDLATRICGSGDVFTDGRGPAFSFNYISRNSGL 641
Query: 654 PLVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGD 713
LVD+VSFSG LASELSWNCGEEG T K+AVL+RRLKQIRNFLF+ Y+SLGVP+LNMGD
Sbjct: 642 SLVDIVSFSGPELASELSWNCGEEGATNKSAVLQRRLKQIRNFLFIQYISLGVPVLNMGD 701
Query: 714 ECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRK-----------ENI 762
ECG S+ GSP RKPFDWN LA+ FG QIT+FISF++S R +R ENI
Sbjct: 702 ECGISTRGSPLLESRKPFDWNLLASAFGTQITQFISFMTSVRARRSDVFQRRDFLKPENI 761
Query: 763 DWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSS--ESSQTKG-DLYIACNAADHSESV 819
W+ +D + P+WEDP KFLA+ +K + E + +S E ++ K DL+I NA+DH ESV
Sbjct: 762 VWYANDQTTPKWEDPASKFLALEIKSESEEEETASLAEPNEPKSNDLFIGFNASDHPESV 821
Query: 820 VLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVL--EQMAGLYTYEMKPYSCTLFEASN 875
VLP P+G W LVDTALPFPGFFS EG+ V+ E + L YEMKPYSCTLFE N
Sbjct: 822 VLPSLPDGSKWRRLVDTALPFPGFFSVEGETVVAEEPLQQLVVYEMKPYSCTLFETIN 879
>TAIR|locus:2061216 [details] [associations]
symbol:ISA1 "isoamylase 1" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0010021 "amylopectin biosynthetic
process" evidence=IMP] [GO:0010368 "chloroplast isoamylase complex"
evidence=IDA] [GO:0019156 "isoamylase activity" evidence=IDA;IMP]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0019252
"starch biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00152 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
EMBL:AF002109 UniGene:At.20831 UniGene:At.71018 GO:GO:0010021
GO:GO:0019252 eggNOG:COG1523 HOGENOM:HOG000239197 KO:K02438
EMBL:BT000443 EMBL:BT010348 IPI:IPI00520721 PIR:B84823
RefSeq:NP_181522.1 HSSP:P10342 ProteinModelPortal:O04196 SMR:O04196
IntAct:O04196 STRING:O04196 PaxDb:O04196 PRIDE:O04196 ProMEX:O04196
EnsemblPlants:AT2G39930.1 GeneID:818580 KEGG:ath:AT2G39930
TAIR:At2g39930 InParanoid:O04196 OMA:HAFVNDQ PhylomeDB:O04196
ProtClustDB:CLSN2683381 BRENDA:3.2.1.68 Genevestigator:O04196
GO:GO:0010368 GO:GO:0019156 Uniprot:O04196
Length = 783
Score = 375 (137.1 bits), Expect = 5.2e-82, Sum P(3) = 5.2e-82
Identities = 77/205 (37%), Positives = 119/205 (58%)
Query: 233 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYD--DTTADRPALELDLDPYINRSG 290
++ G+PSP G + DG +NF+++S ++ +CL D ++ E+ LDP NR+G
Sbjct: 69 ISDGLPSPFGPTVRDDG-VNFSVYSTNSVSATICLISLSDLRQNKVTEEIQLDPSRNRTG 127
Query: 291 DIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVN----SIPNHHDL 346
+WH + + + YGYRF G FS +G+ ++LLDPYAK I++ + D
Sbjct: 128 HVWHVFLRGDFKDMLYGYRFDGKFSPEEGHYYDSSNILLDPYAKAIISRDEFGVLGPDDN 187
Query: 347 GLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGV 406
P +E +FDW GD+HL LP + LV+Y ++V F+ H+SSK+ + GT+ GV
Sbjct: 188 CWPQMACMVPTREEEFDWEGDMHLKLPQKDLVIYEMHVRGFTRHESSKI--EFPGTYQGV 245
Query: 407 TEKVHHLKDLGVNAILLEPILSFDE 431
EK+ HLK+LG+N I L P F+E
Sbjct: 246 AEKLDHLKELGINCIELMPCHEFNE 270
Score = 366 (133.9 bits), Expect = 5.2e-82, Sum P(3) = 5.2e-82
Identities = 106/315 (33%), Positives = 146/315 (46%)
Query: 553 GEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRN 612
G +S PP+I+ I+ DP+L KLIA+ WD G+ FPHW W+E N F + VR
Sbjct: 440 GTPISCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGM-FPHWGIWSEWNGKFRDVVRQ 498
Query: 613 FFRG-EGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVSFSG-GGLAS-- 668
F +G +G A LCGS +++ GR P S N+I + G L DLV+++ LA+
Sbjct: 499 FIKGTDGFSGAFAECLCGSPNLYQGGRKPWHSINFICAHDGFTLADLVTYNNKNNLANGE 558
Query: 669 --------ELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSW 720
SWNCGEEG +V R +Q+RNF L VS GVP++ MGDE G +
Sbjct: 559 ENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKG 618
Query: 721 GSPS-YA-DR--KPFDWNALATGFGIQITEFISFLSSFR----------LKRKENIDWHG 766
G+ + Y D F W+ F L FR + + WHG
Sbjct: 619 GNNNTYCHDNYMNYFRWDKKEEAHS-DFFRFCRILIKFRDECESLGLNDFPTAKRLQWHG 677
Query: 767 SDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNAADHSESVVLPPPPE 826
P W + +F+A L VD K ++Y+A N + + V LP P
Sbjct: 678 LAPEIPNWSETS-RFVAFSL-VDSV-----------KKEIYVAFNTSHLATLVSLPNRP- 723
Query: 827 GMTWHHLVDTALPFP 841
G W VDT+ P P
Sbjct: 724 GYRWEPFVDTSKPSP 738
Score = 212 (79.7 bits), Expect = 5.2e-82, Sum P(3) = 5.2e-82
Identities = 51/123 (41%), Positives = 72/123 (58%)
Query: 441 FFSPT-KLHGPSRGSIS--AINSMKEMVKKLHANGIEVLLEVVFTRTADG-------ALQ 490
FFSP + S + + AIN K +VK+ H GIEV+++VV TA+G + +
Sbjct: 295 FFSPMIRYASASSNNFAGRAINEFKILVKEAHKRGIEVIMDVVLNHTAEGNEKGPIFSFR 354
Query: 491 GIDDSSYYY-AHRGEGIETT---NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASS 546
G+D+S YY A +GE + N NCN+P V+Q IL+ LR+WVTE H+DGF F S
Sbjct: 355 GVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVTEMHVDGFRFDLGSI 414
Query: 547 LLR 549
+ R
Sbjct: 415 MSR 417
Score = 39 (18.8 bits), Expect = 4.0e-29, Sum P(2) = 4.0e-29
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 261 QGVVLCL-YDDTTADRPALELDLDPYINRSGDIWHAS 296
Q ++ CL Y T DL ++RS +W A+
Sbjct: 389 QFILDCLRYWVTEMHVDGFRFDLGSIMSRSSSLWDAA 425
>TAIR|locus:2122343 [details] [associations]
symbol:ISA3 "isoamylase 3" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009569 "chloroplast starch grain" evidence=IDA]
[GO:0005983 "starch catabolic process" evidence=IMP] [GO:0019156
"isoamylase activity" evidence=IDA] [GO:0000272 "polysaccharide
catabolic process" evidence=RCA] [GO:0005982 "starch metabolic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
UniPathway:UPA00153 InterPro:IPR013780 GO:GO:0009570
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 CAZy:CBM48 GO:GO:0005983 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AL161513 eggNOG:COG1523 HOGENOM:HOG000239197
KO:K02438 HSSP:P10342 GO:GO:0019156 EMBL:AY091058 EMBL:AY133739
EMBL:AK227049 IPI:IPI00519580 PIR:B85091 RefSeq:NP_192641.2
UniGene:At.33717 ProteinModelPortal:Q9M0S5 SMR:Q9M0S5 STRING:Q9M0S5
PaxDb:Q9M0S5 PRIDE:Q9M0S5 EnsemblPlants:AT4G09020.1 GeneID:826481
KEGG:ath:AT4G09020 TAIR:At4g09020 InParanoid:Q8RWW6 OMA:VPTVWPG
PhylomeDB:Q9M0S5 ProtClustDB:CLSN2915032
BioCyc:ARA:AT4G09020-MONOMER BioCyc:MetaCyc:AT4G09020-MONOMER
Genevestigator:Q9M0S5 GO:GO:0009569 Uniprot:Q9M0S5
Length = 764
Score = 617 (222.3 bits), Expect = 3.8e-60, P = 3.8e-60
Identities = 167/474 (35%), Positives = 238/474 (50%)
Query: 436 YFPRHFFSPTKLHGPSRGS-ISAINSMKEMVKKLHANGIEVLLEVVFTRT--ADG----- 487
Y +FF+P + G I A KEMVK LH+ GIEV+L+VV+ T AD
Sbjct: 309 YSTVNFFAPMSRYASGEGDPIKASKEFKEMVKALHSAGIEVILDVVYNHTNEADDKYPYT 368
Query: 488 -ALQGIDDSSYYYAHRGEGIETT----NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFI 542
+ +GID+ YY + N LNCN+P V ++IL+SLRHWVTE+H+DGF F
Sbjct: 369 TSFRGIDNKVYYMLDPNNQLLNFSGCGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFD 428
Query: 543 NASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAEL 602
AS L R G LS PPLI AIA D +LS+ K+IA+ WD G+ +FP+W RWAE
Sbjct: 429 LASVLCRATDGSPLSAPPLIRAIAKDSVLSRCKIIAEPWDCGGLYLVG-KFPNWDRWAEW 487
Query: 603 NTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFS-DGRGPAFSFNYIARNTGLPLVDLVS 660
N + +DVR F +G+ G+ ATR+ GS D++ + R P N++ + G L DLVS
Sbjct: 488 NGMYRDDVRRFIKGDSGMKGSFATRVSGSSDLYQVNQRKPYHGVNFVIAHDGFTLRDLVS 547
Query: 661 FS---------GG--GLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPIL 709
++ GG G SWNCG EG T + R +Q++NF L +S G P++
Sbjct: 548 YNFKHNEANGEGGNDGCNDNHSWNCGFEGETGDAHIKSLRTRQMKNFHLALMISQGTPMM 607
Query: 710 NMGDECGQSSWGSP-SYA---DRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIDWH 765
MGDE G + +G+ SY F W L + F F + + ++ H
Sbjct: 608 LMGDEYGHTRYGNNNSYGHDTSLNNFQWKELDAK---KQNHFRFFSEVIKFRHSHHVLKH 664
Query: 766 GS--DHSPPRWEDPDCKFLAMRLKVDKAESQ-LSSESSQTKG--DLYIACNAADHSESVV 820
+ W + + D +ES+ L+ G D+Y+A NA D+ +
Sbjct: 665 ENFLTQGEITWHEDNW---------DNSESKFLAFTLHDGIGGRDIYVAFNAHDYFVKAL 715
Query: 821 LPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLY-TYEMKPYSCTLFEA 873
+P PP G W + DT L P F EG +AG+ TY + P+S L ++
Sbjct: 716 IPQPPPGKQWFRVADTNLESPDDFVREG------VAGVADTYNVAPFSSILLQS 763
Score = 420 (152.9 bits), Expect = 4.1e-36, P = 4.1e-36
Identities = 108/298 (36%), Positives = 153/298 (51%)
Query: 233 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLY-----DDTTADRPALELDLDPYIN 287
+++G SP+G+S D +NFA+FS++A V LCL D T D +EL LDP +N
Sbjct: 85 VSSGEVSPLGVS-QVDKGINFALFSQNATSVTLCLSLSQSGKDDTDDDGMIELVLDPSVN 143
Query: 288 RSGDIWHASMEST-WNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDL 346
++GD WH +E N V YGYR G G++ +LLDPYAK++
Sbjct: 144 KTGDTWHICVEDLPLNNVLYGYRVDGPGEWQQGHRFDRSILLLDPYAKLVKGHSSFGDSS 203
Query: 347 GLPPKYLGRLCKEPD-FDWGGDVHL-NLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFS 404
++ G E FDWG D N+P + LV+Y +NV F+ +SS + P I G++
Sbjct: 204 QKFAQFYGTYDFESSPFDWGDDYKFPNIPEKDLVIYEMNVRAFTADESSGMDPAIGGSYL 263
Query: 405 GVTEKVHHLKDLGVNAILLEPILSFDE-----QKGP---------YFPRHFFSPTKLHGP 450
G EK+ HL+DLG+NA+ L P+ FDE + P Y +FF+P +
Sbjct: 264 GFIEKIPHLQDLGINAVELLPVFEFDELELQRRSNPRDHMVNTWGYSTVNFFAPMSRYAS 323
Query: 451 SRGS-ISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIE 507
G I A KEMVK LH+ GIEV+L+VV+ T + D Y Y GI+
Sbjct: 324 GEGDPIKASKEFKEMVKALHSAGIEVILDVVYNHTNEA------DDKYPYTTSFRGID 375
>UNIPROTKB|Q8EGU6 [details] [associations]
symbol:glgX "Glycogen isoamylase GlgX" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR011837 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0005980 HOGENOM:HOG000239197 KO:K02438 PANTHER:PTHR10357:SF74
TIGRFAMs:TIGR02100 HSSP:P10342 GO:GO:0004133 RefSeq:NP_717112.1
ProteinModelPortal:Q8EGU6 GeneID:1169306 KEGG:son:SO_1495
PATRIC:23522634 OMA:TWDGLGT ProtClustDB:CLSK906290 Uniprot:Q8EGU6
Length = 750
Score = 400 (145.9 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 117/339 (34%), Positives = 181/339 (53%)
Query: 369 HLN-LPMEKLVVYRLNVMRFSE-HKSSKLPPDIAGTFSGVTEK--VHHLKDLGVNAILLE 424
H N LP+E+ ++Y +++ F+ H +P + GTF+G+ K + +L LGVN + L
Sbjct: 174 HRNPLPIEQCIIYEMHLKGFTALHPEIDVP--LRGTFAGLASKAAIDYLVKLGVNCVELL 231
Query: 425 PILSF-------DEQKGPYFPRH---FFSPTKLHGPSRGSISAINSMKEMVKKLHANGIE 474
PI +F ++Q Y+ + FF+P PS S I + MV LH GIE
Sbjct: 232 PIQAFFSEPFLLEKQLSNYWGYNSIGFFAPE----PSYLSSEDIIEFRTMVDALHGAGIE 287
Query: 475 VLLEVVFTRTADGA-------LQGIDDSSYYYAHRGEG---IETT---NVLNCNYPTVQQ 521
V+L+VV+ +A+G+ +GID+ SYY H + I T N LN N+P + Q
Sbjct: 288 VILDVVYNHSAEGSRLGPTFSFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNLNHPRMLQ 347
Query: 522 MILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYW 581
++L+SLR+WV +DGF F A+SL R +G + +A+ DP+L + KLIA+ W
Sbjct: 348 LVLDSLRYWVKVMGVDGFRFDLAASLGREAYG-FDPGSGFFDALLQDPVLCRVKLIAEPW 406
Query: 582 DPHGVAPKDTRFPHWK-RWAELNTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFS-DGR 638
D + P + ++ ++E N + + +R F+RG+ G+L + A R GSGD F GR
Sbjct: 407 D---IGPGGYQLGNFPVAFSEWNDRYRDTMRRFWRGDHGMLPEFARRFHGSGDFFEHSGR 463
Query: 639 GPAFSFNYIARNTGLPLVDLVSFSGGGLASELSWNCGEE 677
PA S N++ + G L DLVS+ +W GEE
Sbjct: 464 PPAASINFLTSHDGFTLKDLVSY-----CERHNWANGEE 497
Score = 361 (132.1 bits), Expect = 4.3e-42, Sum P(2) = 4.3e-42
Identities = 103/295 (34%), Positives = 157/295 (53%)
Query: 488 ALQGIDDSSYYYAHRGEG---IETT---NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCF 541
+ +GID+ SYY H + I T N LN N+P + Q++L+SLR+WV +DGF F
Sbjct: 308 SFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNLNHPRMLQLVLDSLRYWVKVMGVDGFRF 367
Query: 542 INASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWK-RWA 600
A+SL R +G + +A+ DP+L + KLIA+ WD + P + ++ ++
Sbjct: 368 DLAASLGREAYG-FDPGSGFFDALLQDPVLCRVKLIAEPWD---IGPGGYQLGNFPVAFS 423
Query: 601 ELNTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFS-DGRGPAFSFNYIARNTGLPLVDL 658
E N + + +R F+RG+ G+L + A R GSGD F GR PA S N++ + G L DL
Sbjct: 424 EWNDRYRDTMRRFWRGDHGMLPEFARRFHGSGDFFEHSGRPPAASINFLTSHDGFTLKDL 483
Query: 659 VSF------SGG-----GLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVP 707
VS+ + G G + S++ G EG + +VL R +Q RN L L++S GVP
Sbjct: 484 VSYCERHNWANGEENRDGHHANFSYHYGVEGASNDVSVLVLRARQQRNLLTTLFLSQGVP 543
Query: 708 ILNMGDECGQSSWGSPS-YADRKP---FDWNALATGFGIQITEFISFLSSFRLKR 758
+L GDE G++ G+ + Y P FDW++ G + F L + R KR
Sbjct: 544 MLLSGDETGRTQGGNNNAYCQDNPMNWFDWSS--EGMDKHLLSFTQQLIALR-KR 595
Score = 167 (63.8 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 229 VPVGLNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINR 288
+P ++AG P+G + DG +NFA+FS HA GV LCL+D + +E+ +
Sbjct: 13 LPYSVSAGKAFPLGATVD-DGGVNFALFSAHATGVELCLFDA----QGKVEIQRIALTEQ 67
Query: 289 SGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHH 344
+ IWH + YGYR G + G++ + +LLDPYA+ +V +HH
Sbjct: 68 TQQIWHLYVHGLCAGQLYGYRVYGPYEPQLGHRFNPHKLLLDPYARQLVGRY-HHH 122
>TIGR_CMR|SO_1495 [details] [associations]
symbol:SO_1495 "glycogen operon protein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005977 "glycogen metabolic process" evidence=ISS]
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR011837
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
InterPro:IPR013780 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0005980 HOGENOM:HOG000239197 KO:K02438 PANTHER:PTHR10357:SF74
TIGRFAMs:TIGR02100 HSSP:P10342 GO:GO:0004133 RefSeq:NP_717112.1
ProteinModelPortal:Q8EGU6 GeneID:1169306 KEGG:son:SO_1495
PATRIC:23522634 OMA:TWDGLGT ProtClustDB:CLSK906290 Uniprot:Q8EGU6
Length = 750
Score = 400 (145.9 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 117/339 (34%), Positives = 181/339 (53%)
Query: 369 HLN-LPMEKLVVYRLNVMRFSE-HKSSKLPPDIAGTFSGVTEK--VHHLKDLGVNAILLE 424
H N LP+E+ ++Y +++ F+ H +P + GTF+G+ K + +L LGVN + L
Sbjct: 174 HRNPLPIEQCIIYEMHLKGFTALHPEIDVP--LRGTFAGLASKAAIDYLVKLGVNCVELL 231
Query: 425 PILSF-------DEQKGPYFPRH---FFSPTKLHGPSRGSISAINSMKEMVKKLHANGIE 474
PI +F ++Q Y+ + FF+P PS S I + MV LH GIE
Sbjct: 232 PIQAFFSEPFLLEKQLSNYWGYNSIGFFAPE----PSYLSSEDIIEFRTMVDALHGAGIE 287
Query: 475 VLLEVVFTRTADGA-------LQGIDDSSYYYAHRGEG---IETT---NVLNCNYPTVQQ 521
V+L+VV+ +A+G+ +GID+ SYY H + I T N LN N+P + Q
Sbjct: 288 VILDVVYNHSAEGSRLGPTFSFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNLNHPRMLQ 347
Query: 522 MILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYW 581
++L+SLR+WV +DGF F A+SL R +G + +A+ DP+L + KLIA+ W
Sbjct: 348 LVLDSLRYWVKVMGVDGFRFDLAASLGREAYG-FDPGSGFFDALLQDPVLCRVKLIAEPW 406
Query: 582 DPHGVAPKDTRFPHWK-RWAELNTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFS-DGR 638
D + P + ++ ++E N + + +R F+RG+ G+L + A R GSGD F GR
Sbjct: 407 D---IGPGGYQLGNFPVAFSEWNDRYRDTMRRFWRGDHGMLPEFARRFHGSGDFFEHSGR 463
Query: 639 GPAFSFNYIARNTGLPLVDLVSFSGGGLASELSWNCGEE 677
PA S N++ + G L DLVS+ +W GEE
Sbjct: 464 PPAASINFLTSHDGFTLKDLVSY-----CERHNWANGEE 497
Score = 361 (132.1 bits), Expect = 4.3e-42, Sum P(2) = 4.3e-42
Identities = 103/295 (34%), Positives = 157/295 (53%)
Query: 488 ALQGIDDSSYYYAHRGEG---IETT---NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCF 541
+ +GID+ SYY H + I T N LN N+P + Q++L+SLR+WV +DGF F
Sbjct: 308 SFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNLNHPRMLQLVLDSLRYWVKVMGVDGFRF 367
Query: 542 INASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWK-RWA 600
A+SL R +G + +A+ DP+L + KLIA+ WD + P + ++ ++
Sbjct: 368 DLAASLGREAYG-FDPGSGFFDALLQDPVLCRVKLIAEPWD---IGPGGYQLGNFPVAFS 423
Query: 601 ELNTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFS-DGRGPAFSFNYIARNTGLPLVDL 658
E N + + +R F+RG+ G+L + A R GSGD F GR PA S N++ + G L DL
Sbjct: 424 EWNDRYRDTMRRFWRGDHGMLPEFARRFHGSGDFFEHSGRPPAASINFLTSHDGFTLKDL 483
Query: 659 VSF------SGG-----GLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVP 707
VS+ + G G + S++ G EG + +VL R +Q RN L L++S GVP
Sbjct: 484 VSYCERHNWANGEENRDGHHANFSYHYGVEGASNDVSVLVLRARQQRNLLTTLFLSQGVP 543
Query: 708 ILNMGDECGQSSWGSPS-YADRKP---FDWNALATGFGIQITEFISFLSSFRLKR 758
+L GDE G++ G+ + Y P FDW++ G + F L + R KR
Sbjct: 544 MLLSGDETGRTQGGNNNAYCQDNPMNWFDWSS--EGMDKHLLSFTQQLIALR-KR 595
Score = 167 (63.8 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 229 VPVGLNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINR 288
+P ++AG P+G + DG +NFA+FS HA GV LCL+D + +E+ +
Sbjct: 13 LPYSVSAGKAFPLGATVD-DGGVNFALFSAHATGVELCLFDA----QGKVEIQRIALTEQ 67
Query: 289 SGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHH 344
+ IWH + YGYR G + G++ + +LLDPYA+ +V +HH
Sbjct: 68 TQQIWHLYVHGLCAGQLYGYRVYGPYEPQLGHRFNPHKLLLDPYARQLVGRY-HHH 122
>UNIPROTKB|P15067 [details] [associations]
symbol:glgX species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0043169 "cation binding" evidence=IEA] [GO:0005980 "glycogen
catabolic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0004135 "amylo-alpha-1,6-glucosidase activity"
evidence=IDA] [GO:0004133 "glycogen debranching enzyme activity"
evidence=IMP] HAMAP:MF_01248 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR011837 InterPro:IPR013781 InterPro:IPR015902
InterPro:IPR022844 Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00165
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
PANTHER:PTHR10357 EMBL:U18997 CAZy:CBM48 GO:GO:0006974
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 GO:GO:0004135
EMBL:J01616 PIR:B65139 RefSeq:NP_417889.1 RefSeq:YP_492002.1
PDB:2WSK PDBsum:2WSK ProteinModelPortal:P15067 SMR:P15067
IntAct:P15067 EnsemblBacteria:EBESCT00000000066
EnsemblBacteria:EBESCT00000017349 GeneID:12934523 GeneID:947941
KEGG:ecj:Y75_p3746 KEGG:eco:b3431 PATRIC:32122302 EchoBASE:EB0376
EcoGene:EG10381 eggNOG:COG1523 HOGENOM:HOG000239197 KO:K02438
OMA:HPVMIAY ProtClustDB:PRK03705 BioCyc:EcoCyc:EG10381-MONOMER
BioCyc:ECOL316407:JW3394-MONOMER BioCyc:MetaCyc:EG10381-MONOMER
EvolutionaryTrace:P15067 Genevestigator:P15067
PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 Uniprot:P15067
Length = 657
Score = 372 (136.0 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 131/464 (28%), Positives = 219/464 (47%)
Query: 233 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYD----DTTADRPALELDL-DPYIN 287
L G P+P+G + G +NF +FS HA+ V LC++D + D P D+ Y+
Sbjct: 4 LAIGKPAPLGAHYDGQG-VNFTLFSAHAERVELCVFDANGQEHRYDLPGHSGDIWHGYLP 62
Query: 288 --RSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHD 345
R G + + W + G+RF + D ++ D ++ P++ D
Sbjct: 63 DARPGLRYGYRVHGPWQ-PAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYRD 121
Query: 346 -LGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFS 404
+ PK + + +DW D P ++Y +V + + ++P +I GT+
Sbjct: 122 NAAIAPKCVVVV---DHYDWEDDAPPRTPWGSTIIYEAHVKGLT-YLHPEIPVEIRGTYK 177
Query: 405 GVTEKV--HHLKDLGVNAILLEPILSFDEQKGPYFPR----HF--FSPTKLHG--PSRGS 454
+ V ++LK LG+ A+ L P+ F + P R ++ ++P + P+
Sbjct: 178 ALGHPVMINYLKQLGITALELLPVAQFASE--PRLQRMGLSNYWGYNPVAMFALHPAYAC 235
Query: 455 I--SAINSMKEMVKKLHANGIEVLLEVVFTRTA----DG---ALQGIDDSSYYYAHR-GE 504
+A++ ++ +K LH GIEV+L++V +A DG +L+GID+ SYY+ G+
Sbjct: 236 SPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGD 295
Query: 505 GIETT---NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPL 561
T N LN ++P V LR+WV H+DGF F A+ + G E+ PL
Sbjct: 296 YHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVM--GRTPEFRQDAPL 353
Query: 562 IEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKR-WAELNTNFCNDVRNFFRGEGL- 619
AI P+LS+ KLIA+ WD +AP + ++ +AE N +F + R F+ L
Sbjct: 354 FTAIQNCPVLSQVKLIAEPWD---IAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLP 410
Query: 620 LSDLATRLCGSGDIFS-DGRGPAFSFNYIARNTGLPLVDLVSFS 662
L A R S D+F +GR P+ + N + + G L D V F+
Sbjct: 411 LGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFN 454
Score = 286 (105.7 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 122/391 (31%), Positives = 176/391 (45%)
Query: 488 ALQGIDDSSYYYAHR-GEGIETT---NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFIN 543
+L+GID+ SYY+ G+ T N LN ++P V LR+WV H+DGF F
Sbjct: 278 SLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDL 337
Query: 544 ASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKR-WAEL 602
A+ + G E+ PL AI P+LS+ KLIA+ WD +AP + ++ +AE
Sbjct: 338 AAVM--GRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWD---IAPGGYQVGNFPPLFAEW 392
Query: 603 NTNFCNDVRNFFRGEGL-LSDLATRLCGSGDIFS-DGRGPAFSFNYIARNTGLPLVDLVS 660
N +F + R F+ L L A R S D+F +GR P+ + N + + G L D V
Sbjct: 393 NDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVC 452
Query: 661 FS------GG-----GLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPIL 709
F+ G G + S N G+EG ++ERR I L L +S G P+L
Sbjct: 453 FNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPML 512
Query: 710 NMGDECGQSSWGSPS-YADRKPF---DWNALATGFGIQITEFISFLSSFRLKR----KEN 761
GDE G S G+ + Y DW+ ++G +T F + L R KR EN
Sbjct: 513 LAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSG----LTAFTAALIHLR-KRIPALVEN 567
Query: 762 IDWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNAADHSESVVL 821
W D + RW + ++ A L D+ ++ IA NA +VL
Sbjct: 568 RWWEEGDGNV-RWLN---RY-AQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVL 622
Query: 822 PPPPEGMTWHHLVDTALPFPGFFSTEGKPVL 852
P G WH A+P P F+ E PV+
Sbjct: 623 PA---G-EWH-----AIP-P--FAGEDNPVI 641
>UNIPROTKB|Q9KKS1 [details] [associations]
symbol:VC_A1029 "Glycogen operon protein GlgX"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005977 "glycogen
metabolic process" evidence=ISS] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR011837 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005977 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 HSSP:P07762
KO:K02438 PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 GO:GO:0004133
OMA:TWDGLGT PIR:D82388 RefSeq:NP_233413.1 ProteinModelPortal:Q9KKS1
DNASU:2612208 GeneID:2612208 KEGG:vch:VCA1029 PATRIC:20086574
ProtClustDB:CLSK869885 Uniprot:Q9KKS1
Length = 656
Score = 362 (132.5 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 130/464 (28%), Positives = 219/464 (47%)
Query: 233 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYD-DTTADRPALELDLDPYINRSGD 291
+N P P+G + +G NFAI++ + ++L L+ D + + LE + Y +G
Sbjct: 3 MNLSTPFPLGATLDAEGC-NFAIYAPANRDILLALFHADGSYETHQLEHE---Y---AG- 54
Query: 292 IWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSI---P---NHHD 345
+ H + YGY + D + H S DPYA+ + + P +H
Sbjct: 55 VKHTHISGIHAGQKYGYLIQ----LND--ELHYIS---DPYARALEGPLHYAPPFDSHKS 105
Query: 346 LGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSG 405
LP + + FDW + +++V++ +V ++ + + + G + G
Sbjct: 106 FDLPKCVV----TDTHFDWQNVAKPRIARDEMVLFETHVKGLTQ-LNPDVEKALRGKYLG 160
Query: 406 VTEK--VHHLKDLGVNAILLEPILS-FDE----QKGP-----YFPRHFFSPTKLHGPSRG 453
+ + + + +N + L PI + E + G Y P F +P P
Sbjct: 161 LVSQPMLDFYRQQNINTLQLLPIAACMHEPHLLESGKVNYWGYNPYVFMAPD----PRYA 216
Query: 454 SISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQG-------IDDSSYYYAHRGEGI 506
S A+N +K +++LH NGI+V+L+VV+ TA+G G +D + YY H G+
Sbjct: 217 SKDAVNELKTTIRELHRNGIQVILDVVYNHTAEGGTNGPVFNLKALDPN--YYLHHGDHY 274
Query: 507 ETT----NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPP-L 561
N ++ + +++++LR WVTE+ IDGF F A++L G G+ S+
Sbjct: 275 ANYTGCGNTVDLSNQAALNLVMDTLRCWVTEYQIDGFRFDLAATL--GRRGDEFSKEAAF 332
Query: 562 IEAIAFDPLLSKAKLIADYWD--PHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGE-G 618
+A+A DP+L + KLIA+ WD P+G + FP W E N + R+F+RG+ G
Sbjct: 333 FKAVAQDPVLREVKLIAEPWDIGPNGYQVGN--FPFG--WNETNDKLRDITRSFWRGDLG 388
Query: 619 LLSDLATRLCGSGDIFSDGRGP-AFSFNYIARNTGLPLVDLVSF 661
L + ATRL GS D++S P + NYI + G L DLVS+
Sbjct: 389 FLKEFATRLMGSRDLYSAANWPYKLTVNYITYHDGFTLQDLVSY 432
Score = 284 (105.0 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 113/413 (27%), Positives = 182/413 (44%)
Query: 489 LQGIDDSSYYYAHRGEGIETT----NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINA 544
L+ +D + YY H G+ N ++ + +++++LR WVTE+ IDGF F A
Sbjct: 259 LKALDPN--YYLHHGDHYANYTGCGNTVDLSNQAALNLVMDTLRCWVTEYQIDGFRFDLA 316
Query: 545 SSLLRGFHGEYLSRPP-LIEAIAFDPLLSKAKLIADYWD--PHGVAPKDTRFPHWKRWAE 601
++L G G+ S+ +A+A DP+L + KLIA+ WD P+G + FP W E
Sbjct: 317 ATL--GRRGDEFSKEAAFFKAVAQDPVLREVKLIAEPWDIGPNGYQVGN--FPFG--WNE 370
Query: 602 LNTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFSDGRGP-AFSFNYIARNTGLPLVDLV 659
N + R+F+RG+ G L + ATRL GS D++S P + NYI + G L DLV
Sbjct: 371 TNDKLRDITRSFWRGDLGFLKEFATRLMGSRDLYSAANWPYKLTVNYITYHDGFTLQDLV 430
Query: 660 SF------SGG-----GLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPI 708
S+ + G G S N G EG T + R +Q RNF+ L + G+P
Sbjct: 431 SYKHKHNEANGEQNRDGHGDNRSDNYGFEGDTDSIVIRATRERQKRNFMASLLFAFGIPH 490
Query: 709 LNMGDECGQSSWGSPS-YADRKPFDW-----NALATGF-----GI---QITEFISFLSSF 754
+ D + G+ + Y W N F G+ + T + F+ +F
Sbjct: 491 ILTADVLSHTQKGNNNAYCQDNDISWLNWENNETKQDFREWLAGMVAARQTYMVPFIRAF 550
Query: 755 RLKRKEN--IDWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNA 812
+ + N I W D P +D + + ++ L + + S+ + LY+ N
Sbjct: 551 SGENRNNNRIAWRRVDGKPMEMDDWN-RLSSVALHIG-----IGSDGPEM---LYLI-NQ 600
Query: 813 ADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKP 865
+ VLP + W + DT + EG+ VL+ + +P
Sbjct: 601 TNAPARFVLPKDRQ-QDWRLICDTNMRHAQHGHAEGE-VLQLPVSMSILHYQP 651
>TIGR_CMR|VC_A1029 [details] [associations]
symbol:VC_A1029 "glycogen operon protein GlgX" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005977 "glycogen metabolic process" evidence=ISS]
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR011837
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
InterPro:IPR013780 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
CAZy:CBM48 GO:GO:0005977 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 HSSP:P07762
KO:K02438 PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 GO:GO:0004133
OMA:TWDGLGT PIR:D82388 RefSeq:NP_233413.1 ProteinModelPortal:Q9KKS1
DNASU:2612208 GeneID:2612208 KEGG:vch:VCA1029 PATRIC:20086574
ProtClustDB:CLSK869885 Uniprot:Q9KKS1
Length = 656
Score = 362 (132.5 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 130/464 (28%), Positives = 219/464 (47%)
Query: 233 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYD-DTTADRPALELDLDPYINRSGD 291
+N P P+G + +G NFAI++ + ++L L+ D + + LE + Y +G
Sbjct: 3 MNLSTPFPLGATLDAEGC-NFAIYAPANRDILLALFHADGSYETHQLEHE---Y---AG- 54
Query: 292 IWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSI---P---NHHD 345
+ H + YGY + D + H S DPYA+ + + P +H
Sbjct: 55 VKHTHISGIHAGQKYGYLIQ----LND--ELHYIS---DPYARALEGPLHYAPPFDSHKS 105
Query: 346 LGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSG 405
LP + + FDW + +++V++ +V ++ + + + G + G
Sbjct: 106 FDLPKCVV----TDTHFDWQNVAKPRIARDEMVLFETHVKGLTQ-LNPDVEKALRGKYLG 160
Query: 406 VTEK--VHHLKDLGVNAILLEPILS-FDE----QKGP-----YFPRHFFSPTKLHGPSRG 453
+ + + + +N + L PI + E + G Y P F +P P
Sbjct: 161 LVSQPMLDFYRQQNINTLQLLPIAACMHEPHLLESGKVNYWGYNPYVFMAPD----PRYA 216
Query: 454 SISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQG-------IDDSSYYYAHRGEGI 506
S A+N +K +++LH NGI+V+L+VV+ TA+G G +D + YY H G+
Sbjct: 217 SKDAVNELKTTIRELHRNGIQVILDVVYNHTAEGGTNGPVFNLKALDPN--YYLHHGDHY 274
Query: 507 ETT----NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPP-L 561
N ++ + +++++LR WVTE+ IDGF F A++L G G+ S+
Sbjct: 275 ANYTGCGNTVDLSNQAALNLVMDTLRCWVTEYQIDGFRFDLAATL--GRRGDEFSKEAAF 332
Query: 562 IEAIAFDPLLSKAKLIADYWD--PHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGE-G 618
+A+A DP+L + KLIA+ WD P+G + FP W E N + R+F+RG+ G
Sbjct: 333 FKAVAQDPVLREVKLIAEPWDIGPNGYQVGN--FPFG--WNETNDKLRDITRSFWRGDLG 388
Query: 619 LLSDLATRLCGSGDIFSDGRGP-AFSFNYIARNTGLPLVDLVSF 661
L + ATRL GS D++S P + NYI + G L DLVS+
Sbjct: 389 FLKEFATRLMGSRDLYSAANWPYKLTVNYITYHDGFTLQDLVSY 432
Score = 284 (105.0 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 113/413 (27%), Positives = 182/413 (44%)
Query: 489 LQGIDDSSYYYAHRGEGIETT----NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINA 544
L+ +D + YY H G+ N ++ + +++++LR WVTE+ IDGF F A
Sbjct: 259 LKALDPN--YYLHHGDHYANYTGCGNTVDLSNQAALNLVMDTLRCWVTEYQIDGFRFDLA 316
Query: 545 SSLLRGFHGEYLSRPP-LIEAIAFDPLLSKAKLIADYWD--PHGVAPKDTRFPHWKRWAE 601
++L G G+ S+ +A+A DP+L + KLIA+ WD P+G + FP W E
Sbjct: 317 ATL--GRRGDEFSKEAAFFKAVAQDPVLREVKLIAEPWDIGPNGYQVGN--FPFG--WNE 370
Query: 602 LNTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFSDGRGP-AFSFNYIARNTGLPLVDLV 659
N + R+F+RG+ G L + ATRL GS D++S P + NYI + G L DLV
Sbjct: 371 TNDKLRDITRSFWRGDLGFLKEFATRLMGSRDLYSAANWPYKLTVNYITYHDGFTLQDLV 430
Query: 660 SF------SGG-----GLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPI 708
S+ + G G S N G EG T + R +Q RNF+ L + G+P
Sbjct: 431 SYKHKHNEANGEQNRDGHGDNRSDNYGFEGDTDSIVIRATRERQKRNFMASLLFAFGIPH 490
Query: 709 LNMGDECGQSSWGSPS-YADRKPFDW-----NALATGF-----GI---QITEFISFLSSF 754
+ D + G+ + Y W N F G+ + T + F+ +F
Sbjct: 491 ILTADVLSHTQKGNNNAYCQDNDISWLNWENNETKQDFREWLAGMVAARQTYMVPFIRAF 550
Query: 755 RLKRKEN--IDWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNA 812
+ + N I W D P +D + + ++ L + + S+ + LY+ N
Sbjct: 551 SGENRNNNRIAWRRVDGKPMEMDDWN-RLSSVALHIG-----IGSDGPEM---LYLI-NQ 600
Query: 813 ADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKP 865
+ VLP + W + DT + EG+ VL+ + +P
Sbjct: 601 TNAPARFVLPKDRQ-QDWRLICDTNMRHAQHGHAEGE-VLQLPVSMSILHYQP 651
>ZFIN|ZDB-GENE-110914-16 [details] [associations]
symbol:si:ch211-247m23.1 "si:ch211-247m23.1"
species:7955 "Danio rerio" [GO:0043169 "cation binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780
ZFIN:ZDB-GENE-110914-16 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
GeneTree:ENSGT00390000017040 EMBL:CR753871 EMBL:CR854842
EMBL:CU013513 Ensembl:ENSDART00000150771 Uniprot:H0WF64
Length = 630
Score = 162 (62.1 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 63/235 (26%), Positives = 102/235 (43%)
Query: 334 KIIVNSIPNHHDLGLPP--KYLGRLCKEPDFDWGGDVHLNLPMEKLVVY----RLNVMRF 387
K++V++ + P KY+ R K +DW VH + P + + + +R
Sbjct: 128 KVVVHTSAGERLYRISPWAKYVTRHEKSVIYDW---VHWDPPQPYIHKHPRPQKPRSLRI 184
Query: 388 SE-HKSSKLPPDIAGTFSGVTEKV-HHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPT 445
E H P ++S T V +KDLG N+I L I+ Y+ + T
Sbjct: 185 YESHVGIASPEGKIASYSNFTHNVLPRIKDLGYNSIQLMAIMEH-----AYYASFGYQVT 239
Query: 446 KLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTR----TADGA--LQGIDDSSYYY 499
S +KE++ H+ GI VLL+VV + T DG G D ++
Sbjct: 240 SFFAAS-SRYGTPEELKELIDVAHSLGIIVLLDVVHSHASKNTEDGLNLFDGSDSCFFHS 298
Query: 500 AHRGE-GIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
RGE + + + N + V + +L++LR W+ E+ DGF F +S+L HG
Sbjct: 299 GPRGEHSLWDSRLFNYSSWEVLRFLLSNLRWWMEEYKFDGFRFDGVTSMLYHHHG 353
>TIGR_CMR|GSU_2358 [details] [associations]
symbol:GSU_2358 "isoamylase family protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0016052 "carbohydrate catabolic
process" evidence=ISS] [GO:0019156 "isoamylase activity"
evidence=ISS] InterPro:IPR006047 InterPro:IPR012768
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128
PIRSF:PIRSF006337 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 PANTHER:PTHR10357 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0005992 InterPro:IPR022567 Pfam:PF11941 HOGENOM:HOG000155669
KO:K01236 OMA:YAPDSAY GO:GO:0033942 PANTHER:PTHR10357:SF21
TIGRFAMs:TIGR02402 RefSeq:NP_953405.1 ProteinModelPortal:Q74AJ6
GeneID:2686146 KEGG:gsu:GSU2358 PATRIC:22027565
ProtClustDB:CLSK924601 BioCyc:GSUL243231:GH27-2352-MONOMER
Uniprot:Q74AJ6
Length = 630
Score = 153 (58.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 46/182 (25%), Positives = 82/182 (45%)
Query: 360 PD-FDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGV 418
PD F W + +E+L+ Y L+V F+ P+ GTF E++ +L++LG+
Sbjct: 95 PDSFAWADGQWRGVALEELITYELHVGTFT--------PE--GTFGAAVERLDYLQELGI 144
Query: 419 NAILLEPILSFDEQKGPYFPRHF-FSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLL 477
A+ L P+ F + + F F+P +G G +K +V H G+ V+L
Sbjct: 145 TALELMPVAEFPGSRNWGYDGVFPFAPHHAYGGPDG-------LKSLVDACHRRGLAVIL 197
Query: 478 EVVFTRTADGALQGIDDSSYYYAH-RGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHI 536
+VV+ + Y+ H R + N V+ ++ + HW++E+H+
Sbjct: 198 DVVYNHLGPEGNYLHAFAPYFTDHYRTPWGDAVNFDGPGSDGVRHYVIGNALHWISEYHL 257
Query: 537 DG 538
DG
Sbjct: 258 DG 259
>ZFIN|ZDB-GENE-110411-171 [details] [associations]
symbol:si:ch211-213e17.1 "si:ch211-213e17.1"
species:7955 "Danio rerio" [GO:0043169 "cation binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780
ZFIN:ZDB-GENE-110411-171 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
GeneTree:ENSGT00390000017040 EMBL:BX537292 EMBL:CU075735
EMBL:CU915763 IPI:IPI01024250 Ensembl:ENSDART00000149265
Uniprot:F8W5I0
Length = 688
Score = 152 (58.6 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 58/235 (24%), Positives = 99/235 (42%)
Query: 334 KIIVNSIPNHHDLGLPP--KYLGRLCKEPDFDWGGDVHLNLPMEKLVVY----RLNVMRF 387
K++V + + + P KY+ + +DW H + P + R + +R
Sbjct: 127 KLVVLTKTGEYLFRISPWAKYVTKTVDSVTYDW---THWDPPQPYQFQHPRPPRPSSLRI 183
Query: 388 SE-HKSSKLPPDIAGTFSGVTEKV-HHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPT 445
E H P + ++ T V +KDLG N + L I+ Y+ + T
Sbjct: 184 YEAHVGISSPEEKIASYKNFTRDVLPRIKDLGYNCVQLMAIMEH-----AYYASFGYQVT 238
Query: 446 KLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTR----TADGA--LQGIDDSSYYY 499
S + +K +V H+ GI VLL+VV + T DG G D ++
Sbjct: 239 NFFAAS-SRFGTPDDLKHLVDTAHSMGIAVLLDVVHSHASSNTEDGLNYFDGTDSCFFHG 297
Query: 500 AHRGE-GIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
RG+ + + + N + V + +L++LR W+ E+ DGF F +S+L HG
Sbjct: 298 GSRGKHSLWDSRLFNYSSWEVLRFLLSNLRWWMEEYRFDGFRFDGVTSMLYHHHG 352
>ASPGD|ASPL0000046871 [details] [associations]
symbol:AN2314 species:162425 "Emericella nidulans"
[GO:0005982 "starch metabolic process" evidence=RCA] [GO:0003844
"1,4-alpha-glucan branching enzyme activity" evidence=IEA;RCA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164
InterPro:IPR013780 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 EMBL:BN001307 CAZy:CBM48
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AACD01000038
GO:GO:0003844 eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700
OMA:EIDPYLK EMBL:AB026630 RefSeq:XP_659918.1
ProteinModelPortal:Q9Y8H3 STRING:Q9Y8H3 GeneID:2875628
KEGG:ani:AN2314.2 OrthoDB:EOG47M562 Uniprot:Q9Y8H3
Length = 684
Score = 150 (57.9 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 50/177 (28%), Positives = 81/177 (45%)
Query: 387 FSEHKSSKLPPDIAGTFSGVTEKV-HHLKDLGVNAILLEPIL--SFDEQKGPYFPRHFFS 443
+ H P T+ T + +K LG NAI L I+ ++ G Y +FF+
Sbjct: 183 YEAHVGISSPDTRVATYKEFTANMLPRIKYLGYNAIQLMAIMEHAYYASFG-YQVNNFFA 241
Query: 444 PTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFT---RTADGALQGIDDSSYYYA 500
+ +G +KE+V H+ G+ VLL+VV + + D L D S + Y
Sbjct: 242 ASSRYGKPE-------DLKELVDTAHSMGLVVLLDVVHSHASKNVDDGLNMFDGSDHLYF 294
Query: 501 HRG-EG---IETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
H G +G + + + N V + +L++LR W+ E+ DGF F +S+L HG
Sbjct: 295 HSGSKGQHELWDSRLFNYGNHEVLRFLLSNLRFWMEEYGFDGFRFDGVTSMLYTHHG 351
>DICTYBASE|DDB_G0274105 [details] [associations]
symbol:glgB "branching enzyme" species:44689
"Dictyostelium discoideum" [GO:0043169 "cation binding"
evidence=IEA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA;ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0003844 "1,4-alpha-glucan
branching enzyme activity" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006091 "generation of precursor metabolites and
energy" evidence=ISS] [GO:0005977 "glycogen metabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164
InterPro:IPR013780 dictyBase:DDB_G0274105 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
GenomeReviews:CM000151_GR CAZy:CBM48 GO:GO:0005978
EMBL:AAFI02000012 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
HSSP:P07762 eggNOG:COG0296 KO:K00700 RefSeq:XP_644004.1
ProteinModelPortal:Q555Q9 STRING:Q555Q9 EnsemblProtists:DDB0214943
GeneID:8619432 KEGG:ddi:DDB_G0274105 OMA:EIDPYLK
ProtClustDB:CLSZ2431015 Uniprot:Q555Q9
Length = 678
Score = 155 (59.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 49/170 (28%), Positives = 82/170 (48%)
Query: 392 SSKLPPDIAGTFSGVTEKVHHL-KDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGP 450
SS+LP +I+ T+S + V + K+LG N I L ++ Y+ + T
Sbjct: 188 SSELP-EIS-TYSKFKDTVLPMVKELGYNCIQLMAVMEH-----AYYASFGYQVTNFFAI 240
Query: 451 SRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGI---DDSSYYYAHRG-EG- 505
S +KEM+ K H G+ V L+VV + + L G+ D + ++Y H G G
Sbjct: 241 S-SRFGTPEELKEMIDKAHEMGLLVFLDVVHSHASKNVLDGLNQLDGTDHHYFHSGGRGN 299
Query: 506 --IETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
+ + + N V + +L++LR +V E+H DGF F +S++ HG
Sbjct: 300 HELWDSRLFNYGNWEVMRFLLSNLRFYVDEYHFDGFRFDGVTSMIYTHHG 349
Score = 42 (19.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 35 ASHYVFKSKCTRRPARLEV 53
+ YVFK+K +P L +
Sbjct: 162 SKQYVFKNKSPMKPTELRI 180
>TIGR_CMR|BA_2728 [details] [associations]
symbol:BA_2728 "pullulanase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] InterPro:IPR004193 InterPro:IPR005323
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 Pfam:PF03714 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0030246
CAZy:CBM48 CAZy:CBM41 HOGENOM:HOG000059883 KO:K01200
InterPro:IPR011840 TIGRFAMs:TIGR02104 RefSeq:NP_845079.1
RefSeq:YP_019369.1 RefSeq:YP_028802.1 ProteinModelPortal:Q81PS2
DNASU:1087991 EnsemblBacteria:EBBACT00000012098
EnsemblBacteria:EBBACT00000015197 EnsemblBacteria:EBBACT00000019412
GeneID:1087991 GeneID:2817025 GeneID:2849078 KEGG:ban:BA_2728
KEGG:bar:GBAA_2728 KEGG:bat:BAS2542 OMA:MHKLSSS
ProtClustDB:CLSK875993 BioCyc:BANT260799:GJAJ-2607-MONOMER
BioCyc:BANT261594:GJ7F-2700-MONOMER Uniprot:Q81PS2
Length = 852
Score = 146 (56.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 53/198 (26%), Positives = 94/198 (47%)
Query: 405 GVTEKVHHLKDLGVNAILLEPILSF---DEQK--GP-----YFPRHFFSPTKLHG--PSR 452
GV + H+KDLGV + L PI + +E+K P Y P++F P + P
Sbjct: 390 GVKTGLDHMKDLGVTHVQLLPIFDYASVNEEKVNEPQYNWGYDPKNFNVPEGSYSTNPYE 449
Query: 453 GSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGIDD--SSYYYAHRGEGI--ET 508
++ I +K+M++ LH N + V+++VV+ + A YYY + +G
Sbjct: 450 PTVR-ITELKQMIQTLHDNNLRVVMDVVYNHMYNAAESNFHKLVPGYYYRYNEDGTFANG 508
Query: 509 TNVLN---CNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAI 565
T V N +++ +++S+ +W E+++DGF F L G H +Y + + +A+
Sbjct: 509 TGVGNDTASERTMMRKFMIDSVTYWAKEYNLDGFRFD-----LMGIH-DYETMNEIRKAV 562
Query: 566 -AFDPLLSKAKLIADYWD 582
DP + L + WD
Sbjct: 563 NQIDPSII---LHGEGWD 577
Score = 52 (23.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 25/94 (26%), Positives = 37/94 (39%)
Query: 691 KQIRNFLF-VLYVSLGVPILNMGDECGQSSWGSP-SYADR---KPFDWNALATGFGIQIT 745
KQI +L S G+P L+ G E ++ +G SY DW AT F ++
Sbjct: 685 KQIHKLSSSILLTSQGIPFLHAGQEFMRTKYGDHNSYKSPDSINQMDWLRRAT-FNNEVD 743
Query: 746 EFISFLS------SFRLKRKENIDWHGSDHSPPR 773
+ +FR+ E I H S P+
Sbjct: 744 YMKGLIELRKKYPAFRMTSAEQIKTHVSFIDAPK 777
>UNIPROTKB|F1SK65 [details] [associations]
symbol:F1SK65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043169 "cation binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0005975
PANTHER:PTHR10357 GO:GO:0004553 GeneTree:ENSGT00390000017040
EMBL:CU466470 Ensembl:ENSSSCT00000013131 OMA:ALEWAPA
ArrayExpress:F1SK65 Uniprot:F1SK65
Length = 319
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 68/277 (24%), Positives = 117/277 (42%)
Query: 301 WNFVSYGYRFKGSFSQGDGY--KSHLESVLLDPYA---KIIVNSIPNHHDLGLPP--KYL 353
WN SY Y+ K F + + Y SVL+ P+ KI++ S + P KY+
Sbjct: 42 WNPFSYPYK-KLDFGKWELYIPPKQNRSVLV-PHGSKLKIVIRSKSGEILYRISPWAKYV 99
Query: 354 GRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAG--TFSGVTEKVH 411
R ++DW H + P Y+ + + K ++ G ++ G
Sbjct: 100 TREGDNVNYDW---THWD-PEHP---YKFKHSKPKKPKGPRIYESHVGISSYEGKIASYK 152
Query: 412 H--------LKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKE 463
H +KDLG N I L I+ Y+ + T S +KE
Sbjct: 153 HFTCNVLPRIKDLGYNCIQLMAIMEH-----AYYASFGYQITSFFAAS-SRYGTPEELKE 206
Query: 464 MVKKLHANGIEVLLEVVFTRTADGALQGID-----DSSYY-YAHRGE-GIETTNVLNCNY 516
+V H+ GI VLL++V + + + G++ +S Y+ Y RG + + + + +
Sbjct: 207 LVDTAHSMGITVLLDLVHSHASKNSEDGLNMFDGTESCYFHYGPRGNHNLWDSRLFDYSS 266
Query: 517 PTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
V + +L+++R W+ E+ DGF F +S+L HG
Sbjct: 267 WEVLRFLLSNIRWWLEEYGFDGFRFDGVTSMLYYHHG 303
>UNIPROTKB|E1C303 [details] [associations]
symbol:GBE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005978 "glycogen
biosynthetic process" evidence=IEA] [GO:0043169 "cation binding"
evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006407 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 PIRSF:PIRSF000463 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 PANTHER:PTHR10357 GO:GO:0004553
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
OMA:IAVIMDI GeneTree:ENSGT00390000017040 EMBL:AADN02042252
EMBL:AADN02042253 EMBL:AADN02042254 EMBL:AADN02042255
EMBL:AADN02042256 EMBL:AADN02042257 IPI:IPI00596853
ProteinModelPortal:E1C303 Ensembl:ENSGALT00000025002 Uniprot:E1C303
Length = 588
Score = 141 (54.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 53/216 (24%), Positives = 97/216 (44%)
Query: 351 KYLGRLCKEPDFDWGGDVHLNLPMEKLVVYR----LNVMRFSE-HKSSKLPPDIAGTFSG 405
+Y+ R + ++DW VH + P + +R L +R E H P ++
Sbjct: 148 RYVVRYEGKVNYDW---VHWDPPQSYIRKHRSPKKLKSLRIYESHVGIASPEGKIASYKN 204
Query: 406 VTEKV-HHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEM 464
T V ++DLG N I L ++ Y+ + T S + +KE+
Sbjct: 205 FTYNVLPRIRDLGYNCIQLMAVMEH-----AYYASFGYQVTSFFAAS-SRYGTPDDLKEL 258
Query: 465 VKKLHANGIEVLLEVVFTRTADGALQGID-----DSSYYYAH-RG-EGIETTNVLNCNYP 517
+ H+ GI VLL+VV + + + G++ DS ++++ RG I + + +
Sbjct: 259 IDVAHSMGITVLLDVVHSHASKNSEDGLNKFDGTDSCFFHSGPRGTHRIWDSRLFDYANW 318
Query: 518 TVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
V + +L++LR W+ ++ DGF F +S+L HG
Sbjct: 319 EVLRFLLSNLRMWIEDYGFDGFRFDGVTSMLYHDHG 354
>UNIPROTKB|G4NAD9 [details] [associations]
symbol:MGG_03186 "1,4-alpha-glucan-branching enzyme"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:CM001234 GO:GO:0003844
KO:K00700 RefSeq:XP_003716803.1 ProteinModelPortal:G4NAD9
EnsemblFungi:MGG_03186T0 GeneID:2676993 KEGG:mgr:MGG_03186
Uniprot:G4NAD9
Length = 691
Score = 151 (58.2 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 49/181 (27%), Positives = 83/181 (45%)
Query: 383 NVMRFSEHKSSKLPPDIAGTFSGVTEKV-HHLKDLGVNAILLEPIL--SFDEQKGPYFPR 439
+V + H P T+ T+ + +K LG N I L I+ ++ G Y
Sbjct: 189 SVRVYEAHVGISSPELRVATYKEFTKNMLPRIKKLGYNVIQLMAIMEHAYYASFG-YQIN 247
Query: 440 HFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGI---DDSS 496
+FF+ + +G +KE++ H G+ VLL+VV + + L GI D +
Sbjct: 248 NFFAASSRYGTPE-------DLKELIDAAHGMGLTVLLDVVHSHASKNVLDGINEFDGTD 300
Query: 497 YYYAHRG-EGIET---TNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFH 552
+ Y H G +G + + N + V + +L++LR W+ E+ DGF F +S+L H
Sbjct: 301 HQYFHAGGKGRHDQWDSRLFNYGHHEVLRFLLSNLRFWMDEYQFDGFRFDGVTSMLYLHH 360
Query: 553 G 553
G
Sbjct: 361 G 361
Score = 39 (18.8 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/126 (23%), Positives = 47/126 (37%)
Query: 733 WNALATGFGIQITEFISFLSSFRLKRKENIDWHGSDHSPPRWEDPDCKFLAMRLKVDKAE 792
W+ GF ++ I + LK K++ +W +D C L R +K
Sbjct: 417 WSDGGVGFDYRLAMAIPDMWIKILKEKKDEEWDMADI---------CWTLTNRRHGEKTI 467
Query: 793 SQLSSESSQTKGDLYIA---CNAADHSE-SVVLPPPP---EGMTWH---HLVDTALPFPG 842
+ S GD + C+A ++ S + P P GM H L+ L G
Sbjct: 468 AYCESHDQALVGDKTLMMHLCDAEMYTHMSTLTPLTPIIDRGMALHKMIRLLTHGLGGEG 527
Query: 843 FFSTEG 848
+ + EG
Sbjct: 528 YLNFEG 533
>UNIPROTKB|F1PX32 [details] [associations]
symbol:GBE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043169 "cation binding" evidence=IEA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching enzyme
activity" evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 KO:K00700 OMA:EIDPYLK CTD:2632
GeneTree:ENSGT00390000017040 EMBL:AAEX03016422 EMBL:AAEX03016423
RefSeq:XP_535555.3 Ensembl:ENSCAFT00000012537 GeneID:478380
KEGG:cfa:478380 Uniprot:F1PX32
Length = 699
Score = 141 (54.7 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 65/269 (24%), Positives = 114/269 (42%)
Query: 301 WNFVSYGYRFKGSFSQGDGYKSHLESV-LLDPYA---KIIVNSIPNHHDLGLPP--KYLG 354
WN SY Y+ K + + + Y ++ LL P+ K+++ S + P KY+
Sbjct: 104 WNPFSYPYK-KLDYGKWELYIPPKQNKSLLVPHGSKLKVVIRSKSGEILYRISPWAKYVT 162
Query: 355 RLCKEPDFDW-GGDVHLNLPMEKLVVYRLNVMRFSE-HKS-SKLPPDIAGTFSGVTEKVH 411
R ++DW D + + +R E H S IA +
Sbjct: 163 REGDNVNYDWIHWDPEHPYKFKHSKPKKPRGLRIYESHVGISSYEGKIASYKHFTCNVLP 222
Query: 412 HLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHAN 471
+KDLG N I L I+ Y+ + T S +KE++ H+
Sbjct: 223 RIKDLGYNCIQLMAIMEH-----AYYASFGYQITSFFAAS-SRYGTPEELKELIDTAHSM 276
Query: 472 GIEVLLEVVFTRTADGALQGID-----DSSYYYAH-RGE-GIETTNVLNCNYPTVQQMIL 524
GI VLL+VV + + + G++ DS Y+++ RG + + + + V + +L
Sbjct: 277 GITVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGPRGNHDLWDSRLFAYSSWEVLRFLL 336
Query: 525 NSLRHWVTEFHIDGFCFINASSLLRGFHG 553
+++R W+ E++ DGF F +S+L HG
Sbjct: 337 SNIRWWLEEYYFDGFRFDGVTSMLYHHHG 365
>CGD|CAL0000583 [details] [associations]
symbol:GLC3 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005978 "glycogen biosynthetic
process" evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AACQ01000033 GO:GO:0003844
HOGENOM:HOG000175159 KO:K00700 RefSeq:XP_719298.1
ProteinModelPortal:Q5AC50 STRING:Q5AC50 GeneID:3639129
KEGG:cal:CaO19.13067 CGD:CAL0070583 Uniprot:Q5AC50
Length = 676
Score = 151 (58.2 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 49/199 (24%), Positives = 87/199 (43%)
Query: 364 WGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHL-KDLGVNAIL 422
W + P K + + + H P G++ T+ V + +DLG N I
Sbjct: 155 WEDNYQFKNPRPKKNIAAGGIKIYEAHVGISTPEPTIGSYKNFTQNVLPIIRDLGYNTIQ 214
Query: 423 LEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFT 482
L I+ Y+ + T S + +KE++ H GI+VLL+VV +
Sbjct: 215 LMAIMEH-----AYYASFGYQVTSFFAIS-SRYGTPDELKELIDTAHGMGIQVLLDVVHS 268
Query: 483 RTA---DGALQGIDDSSYYYAHRGE-G---IETTNVLN-CNYPTVQQMILNSLRHWVTEF 534
++ D L + + +Y H G G + + + N NY T++ +L++L++++ F
Sbjct: 269 HSSKNVDDGLNMFNGTDHYLFHGGSRGNHDLWDSRLFNYTNYETLR-FLLSNLKYYIDVF 327
Query: 535 HIDGFCFINASSLLRGFHG 553
DGF F +S+L HG
Sbjct: 328 QFDGFRFDGVTSMLYKHHG 346
Score = 38 (18.4 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 741 GIQITEFISFLSSFRLKRKENIDWHGSDHSPPRWED 776
GI + + I L +F L +++ G++ P W D
Sbjct: 498 GIALHKLIR-LVTFALGGDGYLNFEGNEFGHPEWLD 532
>TAIR|locus:2044903 [details] [associations]
symbol:SBE2.1 "starch branching enzyme 2.1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS;IDA] [GO:0005982 "starch metabolic process"
evidence=RCA;IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0000272 "polysaccharide catabolic process" evidence=RCA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0019252 "starch biosynthetic process" evidence=RCA] [GO:0010021
"amylopectin biosynthetic process" evidence=TAS] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00152
InterPro:IPR013780 GO:GO:0009570 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071333 GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0004553 CAZy:CBM48 GO:GO:0005978 EMBL:AC006919
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0071329 GO:GO:0003844
GO:GO:0071482 GO:GO:0009501 GO:GO:0005982 EMBL:AJ000497
EMBL:AY136411 EMBL:AK226896 EMBL:U18817 IPI:IPI00543392 PIR:B84780
PIR:S65045 RefSeq:NP_181180.1 UniGene:At.24317 UniGene:At.67284
HSSP:P07762 ProteinModelPortal:O23647 SMR:O23647 STRING:O23647
PaxDb:O23647 PRIDE:O23647 ProMEX:O23647 EnsemblPlants:AT2G36390.1
GeneID:818212 KEGG:ath:AT2G36390 TAIR:At2g36390 eggNOG:COG0296
HOGENOM:HOG000175159 InParanoid:O23647 KO:K00700 OMA:IAVIMDI
PhylomeDB:O23647 ProtClustDB:PLN02447 Genevestigator:O23647
GO:GO:0010021 GO:GO:0071332 GO:GO:0019252 Uniprot:O23647
Length = 858
Score = 142 (55.0 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 43/169 (25%), Positives = 78/169 (46%)
Query: 393 SKLPPDIAGTFSGVTEKV-HHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPS 451
S P I T++ + V +K LG NA+ + I Q+ Y+ + T PS
Sbjct: 336 SSTEPKI-NTYANFRDDVLPRIKKLGYNAVQIMAI-----QEHAYYASFGYHVTNFFAPS 389
Query: 452 RGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGID-----DSSYYYA-HRG-E 504
+ +K ++ K H G+ VL+++V + + L G+D D Y+++ RG
Sbjct: 390 -SRFGTPDDLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFDGTDGQYFHSGSRGYH 448
Query: 505 GIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
+ + + N V + +L++ R W+ E+ DGF F +S++ HG
Sbjct: 449 WMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHG 497
>SGD|S000000737 [details] [associations]
symbol:GLC3 "Glycogen branching enzyme, involved in glycogen
accumulation" species:4932 "Saccharomyces cerevisiae" [GO:0005978
"glycogen biosynthetic process" evidence=IEA;IMP] [GO:0043169
"cation binding" evidence=IEA] [GO:0003844 "1,4-alpha-glucan
branching enzyme activity" evidence=IEA;IGI;IMP] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164 SGD:S000000737
InterPro:IPR013780 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48 GO:GO:0005978
EMBL:BK006939 InterPro:IPR014756 SUPFAM:SSF81296 EMBL:U18530
GO:GO:0003844 eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700
OrthoDB:EOG47M562 GeneTree:ENSGT00390000017040 EMBL:M76739
PIR:S50448 RefSeq:NP_010905.1 ProteinModelPortal:P32775 SMR:P32775
DIP:DIP-3873N IntAct:P32775 MINT:MINT-573503 STRING:P32775
PaxDb:P32775 PeptideAtlas:P32775 EnsemblFungi:YEL011W GeneID:856705
KEGG:sce:YEL011W CYGD:YEL011w OMA:ALYWFKE NextBio:982774
Genevestigator:P32775 GermOnline:YEL011W Uniprot:P32775
Length = 704
Score = 133 (51.9 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/177 (27%), Positives = 75/177 (42%)
Query: 387 FSEHKSSKLPPDIAGTFSGVTEKV-HHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPT 445
+ H P T+ TEKV +K LG +AI L I+ Y+ + T
Sbjct: 197 YEAHVGISSPEPKITTYKEFTEKVLPRIKYLGYDAIQLMAIMEH-----AYYASFGYQVT 251
Query: 446 KLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGI---DDSSYYYAH- 501
S +KE++ H+ GI VLL+VV + + G+ D S + Y H
Sbjct: 252 NFFAAS-SRFGTPEELKELIDTAHSMGILVLLDVVHSHASKNVEDGLNMFDGSDHQYFHS 310
Query: 502 ----RGEG-IETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
RGE + + + N VQ+ +L +L +V + DGF F +S+L HG
Sbjct: 311 ISSGRGEHPLWDSRLFNYGKFEVQRFLLANLAFYVDVYQFDGFRFDGVTSMLYVHHG 367
>UNIPROTKB|F1MZP0 [details] [associations]
symbol:GBE1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043169 "cation binding" evidence=IEA] [GO:0005978
"glycogen biosynthetic process" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching enzyme
activity" evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 OMA:EIDPYLK
GeneTree:ENSGT00390000017040 EMBL:DAAA02000685 EMBL:DAAA02000686
EMBL:DAAA02000687 EMBL:DAAA02000688 EMBL:DAAA02000689
EMBL:DAAA02000690 EMBL:DAAA02000691 EMBL:DAAA02000692
IPI:IPI01027954 Ensembl:ENSBTAT00000050765 Uniprot:F1MZP0
Length = 655
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 43/149 (28%), Positives = 70/149 (46%)
Query: 413 LKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANG 472
+KDLG N I L I+ Y+ + T S +KE+V H+ G
Sbjct: 180 IKDLGYNCIQLMAIMEH-----AYYASFGYQITSFFAAS-SRYGTPEELKELVDTAHSMG 233
Query: 473 IEVLLEVVFTRTADGALQGID-----DSSYY-YAHRGEGIETTNVLNCNYPT--VQQMIL 524
I VLL+VV + + + G++ +S Y+ Y RG + + L Y + V + +L
Sbjct: 234 ITVLLDVVHSHASKNSEDGLNMFDGTESCYFHYGPRGTHLLWDSRLFA-YASWEVLRFLL 292
Query: 525 NSLRHWVTEFHIDGFCFINASSLLRGFHG 553
+++R W+ E+ DGF F +S+L HG
Sbjct: 293 SNIRWWLEEYGFDGFRFDGVTSMLYHHHG 321
>UNIPROTKB|E9PGM4 [details] [associations]
symbol:GBE1 "1,4-alpha-glucan-branching enzyme"
species:9606 "Homo sapiens" [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=IEA] [GO:0004553 "hydrolase activity,
hydrolyzing O-glycosyl compounds" evidence=IEA] [GO:0005978
"glycogen biosynthetic process" evidence=IEA] [GO:0043169 "cation
binding" evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 EMBL:AC017015 EMBL:AC025029
EMBL:AC099049 HGNC:HGNC:4180 ChiTaRS:GBE1 IPI:IPI00789251
ProteinModelPortal:E9PGM4 SMR:E9PGM4 Ensembl:ENST00000489715
UCSC:uc021xax.1 ArrayExpress:E9PGM4 Bgee:E9PGM4 Uniprot:E9PGM4
Length = 661
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 66/277 (23%), Positives = 117/277 (42%)
Query: 301 WNFVSYGYRFKGSFSQGDGY--KSHLESVLLDPYA---KIIVNSIPNHHDLGLPP--KYL 353
WN SY Y+ K + + + Y +SVL+ P+ K+++ S + P KY+
Sbjct: 66 WNPFSYPYK-KLDYGKWELYIPPKQNKSVLV-PHGSKLKVVITSKSGEILYRISPWAKYV 123
Query: 354 GRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFS--GVTEKVH 411
R ++DW +H + P Y R + +S ++ G S G
Sbjct: 124 VREGDNVNYDW---IHWD-PEHS---YEFKHSRPKKPRSLRIYESHVGISSHEGKVASYK 176
Query: 412 H--------LKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKE 463
H +K LG N I L I+ Y+ + T S ++E
Sbjct: 177 HFTCNVLPRIKGLGYNCIQLMAIMEH-----AYYASFGYQITSFFAAS-SRYGTPEELQE 230
Query: 464 MVKKLHANGIEVLLEVVFTRTADGALQGID-----DSSYYYAH-RG-EGIETTNVLNCNY 516
+V H+ GI VLL+VV + + + G++ DS Y+++ RG + + + +
Sbjct: 231 LVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDSRLFAYSS 290
Query: 517 PTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
+ + +L+++R W+ E+ DGF F +S+L HG
Sbjct: 291 WEILRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHG 327
>UNIPROTKB|Q04446 [details] [associations]
symbol:GBE1 "1,4-alpha-glucan-branching enzyme"
species:9606 "Homo sapiens" [GO:0004553 "hydrolase activity,
hydrolyzing O-glycosyl compounds" evidence=IEA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=IEA] [GO:0005978 "glycogen biosynthetic
process" evidence=IEA;TAS] [GO:0005977 "glycogen metabolic process"
evidence=TAS] [GO:0006091 "generation of precursor metabolites and
energy" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006006 "glucose metabolic process" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
GO:GO:0005829 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0044281
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
CAZy:CBM48 GO:GO:0005978 GO:GO:0006006 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 eggNOG:COG0296 KO:K00700 EMBL:L07956
EMBL:AK125918 EMBL:AC017015 EMBL:AC025029 EMBL:AC099049
EMBL:BC012098 IPI:IPI00296635 PIR:A46075 RefSeq:NP_000149.3
UniGene:Hs.436062 ProteinModelPortal:Q04446 SMR:Q04446
IntAct:Q04446 MINT:MINT-1415803 STRING:Q04446 PhosphoSite:Q04446
DMDM:67465046 PaxDb:Q04446 PRIDE:Q04446 DNASU:2632
Ensembl:ENST00000429644 GeneID:2632 KEGG:hsa:2632 UCSC:uc021xav.1
CTD:2632 GeneCards:GC03M081621 HGNC:HGNC:4180 HPA:HPA038073
HPA:HPA038074 HPA:HPA038075 MIM:232500 MIM:263570 MIM:607839
neXtProt:NX_Q04446 Orphanet:206583 Orphanet:367 PharmGKB:PA28594
HOVERGEN:HBG051734 InParanoid:Q04446 OrthoDB:EOG4F1X2K
BioCyc:MetaCyc:HS03772-MONOMER ChiTaRS:GBE1 GenomeRNAi:2632
NextBio:10376 ArrayExpress:Q04446 Bgee:Q04446 CleanEx:HS_GBE1
Genevestigator:Q04446 GermOnline:ENSG00000114480 Uniprot:Q04446
Length = 702
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 66/277 (23%), Positives = 117/277 (42%)
Query: 301 WNFVSYGYRFKGSFSQGDGY--KSHLESVLLDPYA---KIIVNSIPNHHDLGLPP--KYL 353
WN SY Y+ K + + + Y +SVL+ P+ K+++ S + P KY+
Sbjct: 107 WNPFSYPYK-KLDYGKWELYIPPKQNKSVLV-PHGSKLKVVITSKSGEILYRISPWAKYV 164
Query: 354 GRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFS--GVTEKVH 411
R ++DW +H + P Y R + +S ++ G S G
Sbjct: 165 VREGDNVNYDW---IHWD-PEHS---YEFKHSRPKKPRSLRIYESHVGISSHEGKVASYK 217
Query: 412 H--------LKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKE 463
H +K LG N I L I+ Y+ + T S ++E
Sbjct: 218 HFTCNVLPRIKGLGYNCIQLMAIMEH-----AYYASFGYQITSFFAAS-SRYGTPEELQE 271
Query: 464 MVKKLHANGIEVLLEVVFTRTADGALQGID-----DSSYYYAH-RG-EGIETTNVLNCNY 516
+V H+ GI VLL+VV + + + G++ DS Y+++ RG + + + +
Sbjct: 272 LVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDSRLFAYSS 331
Query: 517 PTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
+ + +L+++R W+ E+ DGF F +S+L HG
Sbjct: 332 WEILRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHG 368
>MGI|MGI:1921435 [details] [associations]
symbol:Gbe1 "glucan (1,4-alpha-), branching enzyme 1"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching enzyme
activity" evidence=ISO] [GO:0004553 "hydrolase activity,
hydrolyzing O-glycosyl compounds" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0005978
"glycogen biosynthetic process" evidence=ISO] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=ISO] [GO:0043169 "cation binding"
evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
MGI:MGI:1921435 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700 OMA:EIDPYLK CTD:2632
HOVERGEN:HBG051734 OrthoDB:EOG4F1X2K EMBL:AK009815 EMBL:AK050365
EMBL:BC017541 IPI:IPI00109823 RefSeq:NP_083079.1 UniGene:Mm.396102
ProteinModelPortal:Q9D6Y9 SMR:Q9D6Y9 STRING:Q9D6Y9
PhosphoSite:Q9D6Y9 PaxDb:Q9D6Y9 PRIDE:Q9D6Y9
Ensembl:ENSMUST00000163832 GeneID:74185 KEGG:mmu:74185
UCSC:uc007zqu.1 GeneTree:ENSGT00390000017040 InParanoid:Q9D6Y9
NextBio:340028 Bgee:Q9D6Y9 CleanEx:MM_GBE1 Genevestigator:Q9D6Y9
GermOnline:ENSMUSG00000022707 Uniprot:Q9D6Y9
Length = 702
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 68/279 (24%), Positives = 119/279 (42%)
Query: 299 STWNFVSYGYRFKGSFSQGDGY--KSHLESVLLDPYA---KIIVNSIPNHHDLGLPP--K 351
S WN S+ Y+ K + + + Y +S L+ P+ K+++ S + P K
Sbjct: 105 SGWNPFSHPYK-KLEYGKWELYIPPKQNKSPLI-PHGSKLKVVITSKSGEILYRISPWAK 162
Query: 352 YLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFS--GVTEK 409
Y+ R ++DW +H P + Y+ R + +S ++ G S G
Sbjct: 163 YVVRENNNVNYDW---IHW-APEDP---YKFKHSRPKKPRSLRIYESHVGISSHEGKIAS 215
Query: 410 VHH--------LKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSM 461
H +KDLG N I L I+ Y+ + T S +
Sbjct: 216 YKHFTSNVLPRIKDLGYNCIQLMAIMEH-----AYYASFGYQITSFFAAS-SRYGTPEEL 269
Query: 462 KEMVKKLHANGIEVLLEVVFTRTADGALQGID-----DSSYYYAH-RG-EGIETTNVLNC 514
KE+V H+ GI VLL+VV + + + G++ DS Y+++ RG + + +
Sbjct: 270 KELVDTAHSMGIVVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGPRGTHDLWDSRLFIY 329
Query: 515 NYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
+ V + +L+++R W+ E+ DGF F +S+L HG
Sbjct: 330 SSWEVLRFLLSNIRWWLEEYCFDGFRFDGVTSMLYHHHG 368
>TIGR_CMR|CPS_0996 [details] [associations]
symbol:CPS_0996 "alpha amylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004556
"alpha-amylase activity" evidence=ISS] [GO:0016052 "carbohydrate
catabolic process" evidence=ISS] InterPro:IPR004193
InterPro:IPR011839 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF02922 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
GO:GO:0005975 PANTHER:PTHR10357 CAZy:CBM48 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014756 SUPFAM:SSF81296
eggNOG:COG1523 HOGENOM:HOG000251916 GO:GO:0051060
InterPro:IPR024561 Pfam:PF11852 TIGRFAMs:TIGR02103
RefSeq:YP_267745.1 ProteinModelPortal:Q487M0 STRING:Q487M0
GeneID:3521917 KEGG:cps:CPS_0996 PATRIC:21465271 OMA:ANDAWEI
BioCyc:CPSY167879:GI48-1082-MONOMER Uniprot:Q487M0
Length = 998
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 422 LLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVF 481
L+ + D Y P H+ P + +S + +EMV+ LHA G V+++VV+
Sbjct: 449 LVSELREVDNYNWGYDPFHYTVPEGSYAVDAKGVSRLVEFREMVQSLHAMGFRVIMDVVY 508
Query: 482 TRTADGALQG---IDDSSYYYAHR-----GEGIETTNVLNCNYPTVQ--QMILNSLRHWV 531
T L+ +D Y HR G+ ++T N V +++ +SL W
Sbjct: 509 NHTHQAGLEPNSVLDKIVPTYYHRLDPLTGDIEQSTCCDNTATERVMMAKLMTDSLVVWA 568
Query: 532 TEFHIDGFCF 541
++ IDGF F
Sbjct: 569 RDYKIDGFRF 578
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 44/190 (23%), Positives = 81/190 (42%)
Query: 250 SLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYR 309
+++F +++ AQ V + L+DD + + L+ + S +W +S SY Y
Sbjct: 216 AVSFKLWAPTAQAVSIQLFDDNL--QALSDGKLEMVEDSSTGVWQVLSDSQ---ASYAY- 269
Query: 310 FKGSFSQGDGYKSHLESV-LLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDW-GGD 367
+K + +ES+ + DPY+ + S+ + + + L +P DW
Sbjct: 270 YKYQVNVYHPASKKIESLSVTDPYSLSL--SVNSEYSQVVD---LNDAVTQPK-DWLTQQ 323
Query: 368 VHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEK----VHHLKDL---GVNA 420
+ +E V Y ++ FS ++ G + +EK + HLK L G+N
Sbjct: 324 IPTVKNVEDNVFYETHIRDFSANEQQLSDSGFKGKYKAFSEKNSDGIQHLKALQIAGLNN 383
Query: 421 ILLEPILSFD 430
I L P +FD
Sbjct: 384 IHLLP--TFD 391
Score = 44 (20.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 687 ERRLKQ-IRNFLFVLYVSLGVPILNMGDECGQS-SWGSPSY 725
E R++ +++ F L+ G+P ++MG E +S S+ SY
Sbjct: 764 EDRVRMHLQSLSFALFAQ-GIPFIHMGSEFMRSKSFLRDSY 803
>RGD|1309968 [details] [associations]
symbol:Gbe1 "glucan (1,4-alpha-), branching enzyme 1"
species:10116 "Rattus norvegicus" [GO:0003844 "1,4-alpha-glucan
branching enzyme activity" evidence=IDA] [GO:0005978 "glycogen
biosynthetic process" evidence=IDA] [GO:0030246 "carbohydrate
binding" evidence=IDA] InterPro:IPR006047 InterPro:IPR006048
InterPro:IPR006407 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02806 PIRSF:PIRSF000463 InterPro:IPR013780
RGD:1309968 GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0030246 GO:GO:0005978 GO:GO:0003844 KO:K00700 CTD:2632
HOVERGEN:HBG051734 IPI:IPI00363180 EMBL:BC090037
RefSeq:NP_001093972.1 UniGene:Rn.29938 ProteinModelPortal:Q5EB55
PRIDE:Q5EB55 GeneID:288333 KEGG:rno:288333 UCSC:RGD:1309968
NextBio:627978 Genevestigator:Q5EB55 Uniprot:Q5EB55
Length = 536
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 41/148 (27%), Positives = 69/148 (46%)
Query: 413 LKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANG 472
+KDLG N I L I+ Y+ + T S +KE+V H G
Sbjct: 61 IKDLGYNCIQLMAIMEH-----AYYASFGYQVTSFFAAS-SRYGTPEELKELVDTAHLMG 114
Query: 473 IEVLLEVVFTRTADGALQGID-----DSSYYYAH-RG-EGIETTNVLNCNYPTVQQMILN 525
I VLL+VV + + + G++ DS Y+++ RG + + + + V + +L+
Sbjct: 115 IVVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGPRGTHDLWDSRLFIYSSWEVLRFLLS 174
Query: 526 SLRHWVTEFHIDGFCFINASSLLRGFHG 553
++R W+ E+ DGF F +S+L HG
Sbjct: 175 NIRWWLEEYCFDGFRFDGVTSMLYHHHG 202
>FB|FBgn0053138 [details] [associations]
symbol:AGBE "1,4-Alpha-Glucan Branching Enzyme" species:7227
"Drosophila melanogaster" [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 EMBL:AE013599
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
eggNOG:COG0296 KO:K00700 OMA:EIDPYLK GeneTree:ENSGT00390000017040
RefSeq:NP_788342.1 UniGene:Dm.593 ProteinModelPortal:A1Z992
SMR:A1Z992 IntAct:A1Z992 STRING:A1Z992 PaxDb:A1Z992 PRIDE:A1Z992
EnsemblMetazoa:FBtr0087732 EnsemblMetazoa:FBtr0310496 GeneID:326264
KEGG:dme:Dmel_CG33138 UCSC:CG33138-RA FlyBase:FBgn0053138
InParanoid:A1Z992 OrthoDB:EOG4CNP63 PhylomeDB:A1Z992
GenomeRNAi:326264 NextBio:847913 Bgee:A1Z992 Uniprot:A1Z992
Length = 685
Score = 125 (49.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 60/253 (23%), Positives = 110/253 (43%)
Query: 321 KSHLESVL--LDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDWGGDVHLNLPMEK-L 377
++H +L L P+AK +V P + G+ Y + + P ++ H P K L
Sbjct: 126 RNHSGQLLDRLSPWAKYVVQP-PKSANQGV--NYKQYVWEPPSYERYQRQHPGPPRPKSL 182
Query: 378 VVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEK-VHHLKDLGVNAILLEPILSFDEQKGPY 436
+Y +V S+ P + G++ ++ V +K G N I + I+ Y
Sbjct: 183 RIYECHVGIASQE------PRV-GSYDEFADRIVPRIKRQGYNCIQVMAIMEH-----AY 230
Query: 437 FPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGI---D 493
+ + T + S +K M+ H++G+ VLL+VV + + G+ D
Sbjct: 231 YASFGYQVTSFYAAS-SRYGNPEQLKRMIDVAHSHGLFVLLDVVHSHASKNVQDGLNQFD 289
Query: 494 DSSYYYAH---RGE-GIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLL- 548
++ + H RGE + + + N V + +L++LR W E++ DG+ F +S+L
Sbjct: 290 GTNSCFFHDGARGEHSLWDSRLFNYVEYEVLRFLLSNLRWWHDEYNFDGYRFDGVTSMLY 349
Query: 549 ------RGFHGEY 555
GF G+Y
Sbjct: 350 HSRGIGEGFSGDY 362
Score = 47 (21.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 21/99 (21%), Positives = 39/99 (39%)
Query: 683 TAVLERRLKQIRNFLFVLYVSLGVPILN-MGDECGQSSW-GSPSYADRKPF-----DWNA 735
+ +++R L + + + G LN MG+E G W P + + WN
Sbjct: 495 SVIIDRGLALHKMIRLITHALGGEAYLNFMGNEFGHPEWLDFPRVGNNDSYHYARRQWNL 554
Query: 736 LATGFGIQITEFISFLSSFRLKRKENIDWHGSDHSPPRW 774
+ + ++ +L+ F E + +G HS P W
Sbjct: 555 VDD----DLLKY-KYLNEFDRAMNEAEERYGWLHSGPAW 588
>TAIR|locus:2144608 [details] [associations]
symbol:SBE2.2 "starch branching enzyme 2.2" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS;IDA] [GO:0005982 "starch metabolic process"
evidence=RCA;IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019760 "glucosinolate metabolic process"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] [GO:0010021 "amylopectin biosynthetic
process" evidence=TAS] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00152 InterPro:IPR013780
EMBL:CP002688 GO:GO:0009570 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0071333 GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0004553 CAZy:CBM48 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0071329 EMBL:AL162506 GO:GO:0003844
GO:GO:0071482 GO:GO:0009501 GO:GO:0005982 UniGene:At.24317
HSSP:P07762 eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700
ProtClustDB:PLN02447 GO:GO:0010021 GO:GO:0071332 GO:GO:0019252
EMBL:AJ005130 EMBL:U22428 EMBL:AK117729 IPI:IPI00518558 PIR:S65046
PIR:T48392 RefSeq:NP_195985.3 UniGene:At.4765
ProteinModelPortal:Q9LZS3 SMR:Q9LZS3 STRING:Q9LZS3 PRIDE:Q9LZS3
EnsemblPlants:AT5G03650.1 GeneID:831769 KEGG:ath:AT5G03650
TAIR:At5g03650 InParanoid:Q9LZS3 OMA:NDANWIE PhylomeDB:Q9LZS3
Genevestigator:Q9LZS3 Uniprot:Q9LZS3
Length = 805
Score = 135 (52.6 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 40/175 (22%), Positives = 75/175 (42%)
Query: 387 FSEHKSSKLPPDIAGTFSGVTEKV-HHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPT 445
+ H + T++ + V +K LG NA+ + I Q+ Y+ + T
Sbjct: 294 YEAHVGMSSTEPMVNTYANFRDDVLPRIKKLGYNAVQIMAI-----QEHSYYASFGYHVT 348
Query: 446 KLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGI---DDSSYYYAHR 502
PS +K ++ + H G+ VL+++V + + L G+ D + +Y H
Sbjct: 349 NFFAPS-SRCGTPEELKSLIDRAHELGLVVLMDIVHSHASKNTLDGLNMFDGTDAHYFHS 407
Query: 503 G-EGIE---TTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHG 553
G G + + N V + +L++ R W+ E+ DGF F +S++ HG
Sbjct: 408 GPRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHG 462
Score = 37 (18.1 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 212 DGSGDFEIRNHLSAKFCVPVGLNAGVPSPMGLSFSTDGSLNF 253
DGS + + + P G+ +P+ + S G + F
Sbjct: 224 DGSPAIPHGSRVKIRMDTPSGIKDSIPAWIKFSVQAPGEIPF 265
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 878 878 0.00085 122 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 631 (67 KB)
Total size of DFA: 467 KB (2218 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 72.43u 0.17s 72.60t Elapsed: 00:00:04
Total cpu time: 72.45u 0.17s 72.62t Elapsed: 00:00:04
Start: Sat May 11 03:03:31 2013 End: Sat May 11 03:03:35 2013