BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047310
(459 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 192/433 (44%), Gaps = 24/433 (5%)
Query: 43 RARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVISS 102
+ +K K+ GP G+PLIG + + +G PH L++++ + V + +G T V+ S
Sbjct: 4 KTSSKGLKNPPGPWGWPLIGHM-LTLGKNPHLALSRMSQQYGDV--LQIRIGSTPVVVLS 60
Query: 103 EPETAKEIL--SSPAFADRPVKESAYELLFHRAMGFAP-YGDYWRNLRRISATHLFS--- 156
+T ++ L F RP + + ++M F+P G W RR++ L S
Sbjct: 61 GLDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSI 120
Query: 157 -----PRRIAGIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSVFGKRY 211
+E + ++ ++ LMAG G + + + N + FG+RY
Sbjct: 121 ASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRY 180
Query: 212 DFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWL---DLQGVKKRCRILVSKVNVFVE 268
D + N +D P+L +L L K L K F++
Sbjct: 181 DHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKD----LNEKFYSFMQ 236
Query: 269 KIIQEHRLKRTAG-VSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVA 327
K+++EH G + D + + LD +L+D +I ++ ++ G DTV
Sbjct: 237 KMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVT 296
Query: 328 ILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGP 387
+ W L +V++P +Q K Q E+ +V+G SR + SD LPY++A + ET R H
Sbjct: 297 TAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFR-HSSFV 355
Query: 388 LLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMGS 447
+ RD + ++P G VN W I HD ++W P +F PERF+ D +I
Sbjct: 356 PFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKV 415
Query: 448 -DLRLAPFGSGRR 459
++ FG G+R
Sbjct: 416 LSEKVIIFGMGKR 428
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 193/445 (43%), Gaps = 50/445 (11%)
Query: 45 RAKAPKSIAGPP---GYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
R + PK + PP G+PL+G + + +G PH L++++ + V + +G T ++
Sbjct: 8 RPRVPKGLKSPPEPWGWPLLGHV-LTLGKNPHLALSRMSQRYGDV--LQIRIGSTPVLVL 64
Query: 102 SEPETAKEIL--SSPAFADRPVKESAYELLFHRAMGFAP-YGDYWRNLRRI--SATHLFS 156
S +T ++ L F RP ++ + +++ F+ G W RR+ +A + FS
Sbjct: 65 SRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFS 124
Query: 157 ------PRRIAGIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSV---- 206
+E + ++ +++ LMAG G HF N V++SV
Sbjct: 125 IASDPASSSSCYLEEHVSKEAKALISRLQELMAGPG--------HFDPYNQVVVSVANVI 176
Query: 207 ----FGKRYDFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWLDLQGVKKRCRILVSK 262
FG+ + N D FP+L +L ++ R + +
Sbjct: 177 GAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQ-RFKAFNQR 235
Query: 263 VNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIA------VLW 316
F++K +QEH D K V D L K+ ++I ++
Sbjct: 236 FLWFLQKTVQEH-------YQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVN 288
Query: 317 EMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIV 376
++ G DTV + W L +V PEIQ K Q E+ +V+G R + SD P LPYL+A +
Sbjct: 289 DIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFI 348
Query: 377 KETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPER 436
ET R H + RD + ++P VN W + HDP +W +P +F+PER
Sbjct: 349 LETFR-HSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPER 407
Query: 437 FIEEDISIMGSDL--RLAPFGSGRR 459
F+ D + + L ++ FG G+R
Sbjct: 408 FLTADGTAINKPLSEKMMLFGMGKR 432
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 184/438 (42%), Gaps = 35/438 (7%)
Query: 46 AKAPKSIAGPPG---YPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVISS 102
AK S PPG +PLIG+ VG H A+LA + V +G V+ +
Sbjct: 2 AKKTSSKGKPPGPFAWPLIGNAAA-VGQAAHLSFARLARRYGDV--FQIRLGSCPIVVLN 58
Query: 103 EPETAKEIL--SSPAFADRPVKESAYELLFHRAMGFAPYGDYWRNLRRISATHL--FSPR 158
+ L AFADRP S + R+M F Y ++W+ RR + + + F R
Sbjct: 59 GERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTR 118
Query: 159 RIAGIESFRREVGLKMVEQVKSLMAG--NGEVKVKKVLHFASLNNVMMSV-FGKRYDFDX 215
+ + V + E V L+ G +G + L ++ NVM +V FG RY D
Sbjct: 119 QPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDD 178
Query: 216 XXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWLD--LQGVKKRCRILVSKVNVFVEKIIQE 273
+ D P L + ++ V + L + F+
Sbjct: 179 PEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLR 238
Query: 274 HRLKRTAGVSDDHKICVGDFVDV-LLDLEKEA---------KLNDSDMIAVLWEMIFRGT 323
H G + D +D +L EK+A +L+ ++ A + ++
Sbjct: 239 HCESLRPGAAPR------DMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQ 292
Query: 324 DTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIH 383
DT++ L+W+L +P++Q++ QAE+ VVG R D P+LPY+ A + E +R
Sbjct: 293 DTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFS 352
Query: 384 PPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDIS 443
P ++ + V +P T VN W++ HDP W PE F P RF+++D
Sbjct: 353 SFVP-VTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKD-G 410
Query: 444 IMGSDL--RLAPFGSGRR 459
++ DL R+ F G+R
Sbjct: 411 LINKDLTSRVMIFSVGKR 428
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 269 KIIQEHRLKRTAGVSDDHKICVGDFVDVLLD------LEKEAKLNDSDMIAVLWEMIFRG 322
K ++E RL+ T H++ DF+ +++D E L+D +++A IF G
Sbjct: 234 KRMKESRLEDT----QKHRV---DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAG 286
Query: 323 TDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRI 382
+T + +L +I+ + HP++Q K Q EI +V+ N P + + YL +V ETLR+
Sbjct: 287 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL 346
Query: 383 HPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDI 442
P + R+ +DV + F+P G M+ +A+ DP+ W EPEKF PERF +++
Sbjct: 347 FPIA--MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 404
Query: 443 SIMGSDLRLAPFGSGRR 459
+ + PFGSG R
Sbjct: 405 DNIDPYI-YTPFGSGPR 420
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 269 KIIQEHRLKRTAGVSDDHKICVGDFVDVLLD------LEKEAKLNDSDMIAVLWEMIFRG 322
K ++E RL+ T H++ DF+ +++D E L+D +++A IF G
Sbjct: 233 KRMKESRLEDT----QKHRV---DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAG 285
Query: 323 TDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRI 382
+T + +L +I+ + HP++Q K Q EI +V+ N P + + YL +V ETLR+
Sbjct: 286 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL 345
Query: 383 HPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDI 442
P + R+ +DV + F+P G M+ +A+ DP+ W EPEKF PERF +++
Sbjct: 346 FPIA--MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 403
Query: 443 SIMGSDLRLAPFGSGRR 459
+ + PFGSG R
Sbjct: 404 DNIDPYI-YTPFGSGPR 419
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 269 KIIQEHRLKRTAGVSDDHKICVGDFVDVLLD------LEKEAKLNDSDMIAVLWEMIFRG 322
K ++E RL+ T H++ DF+ +++D E L+D +++A IF G
Sbjct: 232 KRMKESRLEDT----QKHRV---DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAG 284
Query: 323 TDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRI 382
+T + +L +I+ + HP++Q K Q EI +V+ N P + + YL +V ETLR+
Sbjct: 285 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL 344
Query: 383 HPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDI 442
P + R+ +DV + F+P G M+ +A+ DP+ W EPEKF PERF +++
Sbjct: 345 FPIA--MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 402
Query: 443 SIMGSDLRLAPFGSGRR 459
+ + PFGSG R
Sbjct: 403 DNIDPYI-YTPFGSGPR 418
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 174/406 (42%), Gaps = 39/406 (9%)
Query: 72 PHRVLAKLATAFRAVPLMAFSVGLTRFVISSEPETAKEIL--SSPAFADRPVKESAYELL 129
PH + K + + + + +G V+ + + KE L S FADRP ++
Sbjct: 36 PHVYMRKQSQVYGEI--FSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT 93
Query: 130 FHRAMGFAPYGDYWRNLRRISATHLFSPRRIA-GIESFRREVGLKMVEQVKSLMAGNGEV 188
+ + YG W + RR++ S R G +SF K++E+ K
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLAVN---SFRYFGYGQKSFES----KILEETKFFNDAIETY 146
Query: 189 K-----VKKVLHFASLNNVMMSVFGKRY---DFDXXXXXXXXXXXXXXXXXXXXFNWSDH 240
K K+++ A N + +FG+R+ D D F + +
Sbjct: 147 KGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLY-NA 205
Query: 241 FPLLGWLDLQGVKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDL 300
FP +G L G ++ + V F+ ++I++ + R + FVD LD
Sbjct: 206 FPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH-------FVDAYLDE 257
Query: 301 EKEAKLNDS------DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISV 354
+ K + S ++I + E+I GT+T +L W + M L+P IQ + Q EI +
Sbjct: 258 MDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI 317
Query: 355 VG-NSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAM 413
+G N +P D D +PY +A++ E LR PL + + D V +P GTT +
Sbjct: 318 MGPNGKPSWD-DKCKMPYTEAVLHEVLRFCNIVPLGIFHATS-EDAVVRGYSIPKGTTVI 375
Query: 414 VNMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
N++++ D + W +PE F PERF++ L PF GRR
Sbjct: 376 TNLYSVHFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRR 420
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 174/406 (42%), Gaps = 39/406 (9%)
Query: 72 PHRVLAKLATAFRAVPLMAFSVGLTRFVISSEPETAKEIL--SSPAFADRPVKESAYELL 129
PH + K + + + + +G V+ + + KE L S FADRP ++
Sbjct: 36 PHVYMRKQSQVYGEI--FSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT 93
Query: 130 FHRAMGFAPYGDYWRNLRRISATHLFSPRRIA-GIESFRREVGLKMVEQVKSLMAGNGEV 188
+ + YG W + RR++ S R G +SF K++E+ K
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLAVN---SFRYFGYGQKSFES----KILEETKFFNDAIETY 146
Query: 189 K-----VKKVLHFASLNNVMMSVFGKRY---DFDXXXXXXXXXXXXXXXXXXXXFNWSDH 240
K K+++ A N + +FG+R+ D D F + +
Sbjct: 147 KGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLY-NA 205
Query: 241 FPLLGWLDLQGVKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDL 300
FP +G L G ++ + V F+ ++I++ + R + FVD LD
Sbjct: 206 FPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH-------FVDAYLDE 257
Query: 301 EKEAKLNDS------DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISV 354
+ K + S ++I + E+I GT+T +L W + M L+P IQ + Q EI +
Sbjct: 258 MDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI 317
Query: 355 VG-NSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAM 413
+G N +P D D +PY +A++ E LR PL + + D V +P GTT +
Sbjct: 318 MGPNGKPSWD-DKCKMPYTEAVLHEVLRFCNIVPLGIFHATS-EDAVVRGYSIPKGTTVI 375
Query: 414 VNMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
N++++ D + W +PE F PERF++ L PF GRR
Sbjct: 376 TNLYSVHFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRR 420
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 184/443 (41%), Gaps = 50/443 (11%)
Query: 43 RARAKAPKSIAGPPGYPLIGSLTVF-VGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
+ AK PKS+ PL+GSL H KL + P+ + +G VI
Sbjct: 4 KTGAKYPKSLLS---LPLVGSLPFLPRHGHMHNNFFKLQKKYG--PIYSVRMGTKTTVIV 58
Query: 102 SEPETAKEIL--SSPAFADRPVKESAYELLFHR-AMGFAPYGDYWRNLRRISATH--LFS 156
+ AKE+L F+ RP + +R + FA G +W+ RR++ LF
Sbjct: 59 GHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFK 118
Query: 157 PRRIAGIESFRREVGLKMVEQVKSLMAGNGE-VKVKKVLHFASLNNVMMSVFGKRYDFDX 215
G + + + ++ L NG+ + + + A N + + F Y
Sbjct: 119 D----GDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGD 174
Query: 216 XXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWLDL--QGVKKRCRILVSKVNVFVEKIIQE 273
+ D P WL + ++ + V N + KI++
Sbjct: 175 PELNVIQNYNEGIIDNLSKDSLVDLVP---WLKIFPNKTLEKLKSHVKIRNDLLNKILEN 231
Query: 274 HRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLN----------------DSDMIAVLWE 317
++ K + D + +LD +AK+N D+ ++ + +
Sbjct: 232 YKEKFRS-----------DSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGD 280
Query: 318 MIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVK 377
+ G +T +++W LA ++ +P+++ K EI VG SR SD L L+A ++
Sbjct: 281 IFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIR 340
Query: 378 ETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERF 437
E LR+ P P+L + V D +G+ V GT ++N+WA+ H+ + W +P++F PERF
Sbjct: 341 EVLRLRPVAPMLIPHKANV-DSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERF 399
Query: 438 IE-EDISIMGSDLRLAPFGSGRR 459
+ ++ + PFG+G R
Sbjct: 400 LNPAGTQLISPSVSYLPFGAGPR 422
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 179/441 (40%), Gaps = 51/441 (11%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
A+ + K GP P+IG+L + +LA F P+ VG R V+
Sbjct: 2 AKKTSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFG--PVFTLYVGSQRMVVM 59
Query: 102 SEPETAKEIL--SSPAFADRPVKESAYELLFHRAMGFA-PYGDYWRNLRRISATHL--FS 156
+ KE L F+ R + + HR G G W+++RR S T L +
Sbjct: 60 HGYKAVKEALLDYKDEFSGRGDLPAFHA---HRDRGIIFNNGPTWKDIRRFSLTTLRNYG 116
Query: 157 PRRIAGIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSV-FGKRYDFDX 215
+ +RE + ++L G+ L + NV+ + F K +D++
Sbjct: 117 MGKQGNESRIQREAHFLL----EALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYND 172
Query: 216 XXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWLDLQ-----------GVKKRCRILVSKVN 264
FN + H WL L G ++ V++V
Sbjct: 173 EKFLRLMYL----------FNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVK 222
Query: 265 VFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLL-DLEKEA----KLNDSDMIAV-LWEM 318
+V + ++EH C D D LL ++EKE +L D I V + ++
Sbjct: 223 EYVSERVKEHHQSLDPN-------CPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADL 275
Query: 319 IFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKE 378
F GT+T + L + L ++ +PEI+ K EI V+G SR D +PY+ A+V E
Sbjct: 276 FFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHE 335
Query: 379 TLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFI 438
R P + A RD +P GT + + ++ +D + + +PEKFKPE F+
Sbjct: 336 IQRFITLVP-SNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFL 394
Query: 439 EEDISIMGSDLRLAPFGSGRR 459
E+ SD PF +G+R
Sbjct: 395 NENGKFKYSDY-FKPFSTGKR 414
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 154/361 (42%), Gaps = 36/361 (9%)
Query: 117 ADRPVKESAYELLFH-RAMG--FAPYGDYWRNLRRISATHLFSPRRIA-GIESFRREVGL 172
ADRP L F R+ G A YG WR RR S + L R + G +S + V
Sbjct: 77 ADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTL---RNLGLGKKSLEQWVTE 133
Query: 173 KMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSV-FGKRYDFDXXXXXXXXXXXXXXXXX 231
+ + +G L +++NV+ S+ G+R+++D
Sbjct: 134 EAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKE 193
Query: 232 XXXFNWSDHFPLLGWLDLQGVKKRCRILVSKVNVF-------VEKIIQEHRLKRTAGVSD 284
F L L+ V + L KV F +++++ EHR+ +
Sbjct: 194 ESGF-------LREVLNAVPVDRHIPALAGKVLRFQKAFLTQLDELLTEHRM------TW 240
Query: 285 DHKICVGDFVDVLL-DLEK-----EAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMV 338
D D + L ++EK E+ ND ++ V+ ++ G T + L W L M+
Sbjct: 241 DPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMI 300
Query: 339 LHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRD 398
LHP++Q + Q EI V+G R + D +PY A++ E R P L + RD
Sbjct: 301 LHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVP-LGMTHMTSRD 359
Query: 399 VYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGR 458
+ V +P GTT + N+ ++ D VW +P +F PE F++ + + L PF +GR
Sbjct: 360 IEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFL-PFSAGR 418
Query: 459 R 459
R
Sbjct: 419 R 419
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 183/436 (41%), Gaps = 40/436 (9%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
A+ + K GP P IG+ + L K++ R P+ +G R V+
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISE--RYGPVFTIHLGPRRVVVL 59
Query: 102 SEPETAKEILSSPA--FADRPVKESAYELLFHRAMGFAPYGDYWRNLRRISATHLFSPRR 159
+ +E L A F+ R +++ ++ +F G+ + LRR S
Sbjct: 60 CGHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFS--------- 109
Query: 160 IAGIESF---RREVGLKMVEQVKSL---MAGNGEVKVKKVLHFA-SLNNVMMS-VFGKRY 211
IA + F +R + ++ E+ L + G G + + +++NV+ S VFG R+
Sbjct: 110 IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
Query: 212 DFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWL--DLQGVKKRCRILVSKVNVFVEK 269
D+ + + + + L G +++ L+ + F+ K
Sbjct: 170 DYKDKEFLSLLRMMLGSFQFTST-STGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAK 228
Query: 270 IIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDS------DMIAVLWEMIFRGT 323
++ + +RT + DF+D L +E + N + +++ + F GT
Sbjct: 229 KVEHN--QRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGT 281
Query: 324 DTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIH 383
+TV+ L + ++ HPE+++K EI V+G +R + D +PY++A++ E R
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFG 341
Query: 384 PPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDIS 443
P + AR +D D F+P GT + ++ DP ++ P+ F P+ F+ E
Sbjct: 342 DVIP-MGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQ 400
Query: 444 IMGSDLRLAPFGSGRR 459
SD PF G+R
Sbjct: 401 FKKSDA-FVPFSIGKR 415
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 184/436 (42%), Gaps = 40/436 (9%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
A+ + K GP P IG+ + L K++ R P+ +G R V+
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISE--RYGPVFTIHLGPRRVVVL 59
Query: 102 SEPETAKEILSSPA--FADRPVKESAYELLFHRAMGFAPYGDYWRNLRRISATHLFSPRR 159
+ +E L A F+ R +++ ++ +F G+ + LRR S
Sbjct: 60 CGHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFS--------- 109
Query: 160 IAGIESF---RREVGLKMVEQVKSL---MAGNGEVKVKKVLHFA-SLNNVMMS-VFGKRY 211
IA + F +R + ++ E+ L + G G + + +++NV+ S VFG R+
Sbjct: 110 IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
Query: 212 DFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWL--DLQGVKKRCRILVSKVNVFVEK 269
D+ + + + + L G +++ L+ + F+ K
Sbjct: 170 DYKDKEFLSLLRMMLGIFQFTST-STGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAK 228
Query: 270 IIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDS------DMIAVLWEMIFRGT 323
++ + +RT + DF+D L +E + N + +++ ++ GT
Sbjct: 229 KVEHN--QRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGT 281
Query: 324 DTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIH 383
+TV+ L + ++ HPE+++K EI V+G +R + D +PY++A++ E R
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFG 341
Query: 384 PPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDIS 443
P +S AR +D D F+P GT + ++ DP ++ P+ F P+ F+ E
Sbjct: 342 DVIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQ 400
Query: 444 IMGSDLRLAPFGSGRR 459
SD PF G+R
Sbjct: 401 FKKSDA-FVPFSIGKR 415
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 180/436 (41%), Gaps = 43/436 (9%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
+ R K P GP P+IG++ + L L+ + P+ GL R V+
Sbjct: 6 SSGRGKLP---PGPTPLPVIGNILQIDIKDVSKSLTNLSKIYG--PVFTLYFGLERMVVL 60
Query: 102 SEPETAKEILSS--PAFADR---PVKESAYELLFHRAMGFA-PYGDYWRNLRRISATHLF 155
E KE L F+ R P+ E A +R G G W+ +RR S L
Sbjct: 61 HGYEVVKEALIDLGEEFSGRGHFPLAERA-----NRGFGIVFSNGKRWKEIRRFS---LM 112
Query: 156 SPRRIA----GIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSVFGKRY 211
+ R IE +E +VE+++ A + +L A N + +F KR+
Sbjct: 113 TLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTF--ILGCAPCNVICSIIFQKRF 170
Query: 212 DFDXXXXXXXXXXXXXXXXXXXX--FNWSDHFPLLGWLDLQGVKKRCRILVSKVNVFVEK 269
D+ ++FP + K + L + +EK
Sbjct: 171 DYKDQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEK 230
Query: 270 IIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKEAKLNDS-----DMIAVLWEMIFRGT 323
+ +EH + + +++ DF+D L+ +EKE + S +++ +++ GT
Sbjct: 231 V-KEH--QESMDINNPR-----DFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGT 282
Query: 324 DTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIH 383
+T + L + L ++ HPE+ +K Q EI VVG +R D +PY A+V E R
Sbjct: 283 ETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYI 342
Query: 384 PPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDIS 443
P S DV + +P GTT + ++ ++ HD + + PE F P F++E +
Sbjct: 343 DLIP-TSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGN 401
Query: 444 IMGSDLRLAPFGSGRR 459
S+ PF +G+R
Sbjct: 402 FKKSNY-FMPFSAGKR 416
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 184/436 (42%), Gaps = 40/436 (9%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
A+ + K GP P IG+ + L K++ R P+ +G R V+
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISE--RYGPVFTIHLGPRRVVVL 59
Query: 102 SEPETAKEILSSPA--FADRPVKESAYELLFHRAMGFAPYGDYWRNLRRISATHLFSPRR 159
+ +E L A F+ R +++ ++ +F G+ + LRR S
Sbjct: 60 CGHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFS--------- 109
Query: 160 IAGIESF---RREVGLKMVEQVKSL---MAGNGEVKVKKVLHFA-SLNNVMMS-VFGKRY 211
IA + F +R + ++ E+ L + G G + + +++NV+ S VFG R+
Sbjct: 110 IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
Query: 212 DFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWL--DLQGVKKRCRILVSKVNVFVEK 269
D+ + + + + L G +++ L+ + F+ K
Sbjct: 170 DYKDKEFLSLLRMMLGIFQFTST-STGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAK 228
Query: 270 IIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDS------DMIAVLWEMIFRGT 323
++ + +RT + DF+D L +E + N + +++ ++ GT
Sbjct: 229 KVEHN--QRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGT 281
Query: 324 DTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIH 383
+TV+ L + ++ HPE+++K EI V+G +R + D +PY++A++ E R
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFG 341
Query: 384 PPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDIS 443
P +S AR +D D F+P GT + ++ DP ++ P+ F P+ F+ E
Sbjct: 342 DVIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQ 400
Query: 444 IMGSDLRLAPFGSGRR 459
SD PF G+R
Sbjct: 401 FKKSDA-FVPFSIGKR 415
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 182/435 (41%), Gaps = 41/435 (9%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
A+ + K GP +P+IG++ + L K + + P+ +G+ V+
Sbjct: 2 AKKTSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYG--PVFTVYLGMKPTVVL 59
Query: 102 SEPETAKEILSS--PAFADR---PVKESAYELLFHRAMGFA-PYGDYWRNLRRISATHLF 155
E KE L FA R P+ E + +G A W+ +RR S L
Sbjct: 60 HGYEAVKEALVDLGEEFAGRGSVPILEKV-----SKGLGIAFSNAKTWKEMRRFS---LM 111
Query: 156 SPRRIA----GIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSVFGKRY 211
+ R IE +E +VE+++ A + +L A N + +F R+
Sbjct: 112 TLRNFGMGKRSIEDRIQEEARCLVEELRKTNASPCDPTF--ILGCAPCNVICSVIFHNRF 169
Query: 212 DFDXXXXXXXXXXXXXXXXXXXX--FNWSDHFPLLGWLD-LQGVKKRCRILVSKVNVFVE 268
D+ ++FP L LD G+ K + F+
Sbjct: 170 DYKDEEFLKLMESLHENVELLGTPWLQVYNNFPAL--LDYFPGIHKTLLKNADYIKNFIM 227
Query: 269 KIIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKEAKLN---DSDMIAVLWEMIFRGTD 324
+ ++EH ++ V++ DF+D L+ +E+E L +S +IAV ++ GT+
Sbjct: 228 EKVKEH--QKLLDVNNPR-----DFIDCFLIKMEQENNLEFTLESLVIAV-SDLFGAGTE 279
Query: 325 TVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHP 384
T + L + L ++ HPE+ ++ Q EI V+G R D +PY A++ E R
Sbjct: 280 TTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFID 339
Query: 385 PGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISI 444
P + RDV + F+P GT + ++ ++ HD + + P+ F P F++E +
Sbjct: 340 LLP-TNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNF 398
Query: 445 MGSDLRLAPFGSGRR 459
SD PF +G+R
Sbjct: 399 KKSDY-FMPFSAGKR 412
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 183/436 (41%), Gaps = 40/436 (9%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
A+ + K GP P IG+ + L K++ R P+ +G R V+
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISE--RYGPVFTIHLGPRRVVVL 59
Query: 102 SEPETAKEILSSPA--FADRPVKESAYELLFHRAMGFAPYGDYWRNLRRISATHLFSPRR 159
+ +E L A F+ R +++ ++ +F G+ + LRR S
Sbjct: 60 CGHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFS--------- 109
Query: 160 IAGIESF---RREVGLKMVEQVKSL---MAGNGEVKVKKVLHFA-SLNNVMMS-VFGKRY 211
IA + F +R + ++ E+ L + G G + + +++NV+ S VFG R+
Sbjct: 110 IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
Query: 212 DFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWL--DLQGVKKRCRILVSKVNVFVEK 269
D+ + + + + L G +++ L+ + F+ K
Sbjct: 170 DYKDKEFLSLLRMMLGIFQFTST-STGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAK 228
Query: 270 IIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDS------DMIAVLWEMIFRGT 323
++ + +RT + DF+D L +E + N + +++ + GT
Sbjct: 229 KVEHN--QRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGT 281
Query: 324 DTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIH 383
+TV+ L + ++ HPE+++K EI V+G +R + D +PY++A++ E R
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFG 341
Query: 384 PPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDIS 443
P +S AR +D D F+P GT + ++ DP ++ P+ F P+ F+ E
Sbjct: 342 DVIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQ 400
Query: 444 IMGSDLRLAPFGSGRR 459
SD PF G+R
Sbjct: 401 FKKSDA-FVPFSIGKR 415
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 147/345 (42%), Gaps = 53/345 (15%)
Query: 140 GDYWRNLRRISATHLFSPRRIAGIESF---RREVGLKMVEQ----VKSLMAGNGEVKVKK 192
G+ WR LRR S +A + F +R V ++ E+ V+ L G +
Sbjct: 99 GERWRALRRFS---------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 VLHFASLNNVMMS-VFGKRYDF---------DXXXXXXXXXXXXXXXXXXXXFNWSDHFP 242
+L + +N++ S VFGKR+D+ D + HFP
Sbjct: 150 LLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP 209
Query: 243 LLGWLDLQGVKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLE 301
G ++ + ++N F+ + +++HR T S+ DF+DV LL +E
Sbjct: 210 --------GTHRQIYRNLQEINTFIGQSVEKHRA--TLDPSNPR-----DFIDVYLLRME 254
Query: 302 KE-----AKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVG 356
K+ ++ + ++I + + F GT+T + L + M+ +P + + Q EI V+G
Sbjct: 255 KDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG 314
Query: 357 NSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWA--RLAVRDVYVGDNFVPAGTTAMV 414
+ RP D +PY A++ E R+ G L+ + +D +P T
Sbjct: 315 SHRPPALDDRAKMPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFP 371
Query: 415 NMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
+ + HDPR + P F P F++ + ++ ++ PF G+R
Sbjct: 372 VLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKR 415
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 181/437 (41%), Gaps = 42/437 (9%)
Query: 42 ARARAKAPKSIAGPPGYPLIGS-LTVFVGSTPHRVLAKLATAFRAV--PLMAFSVGLTRF 98
A+ + K GP P+IG+ L + V + + K T F V P+ G+
Sbjct: 2 AKKTSSKGKLPPGPTPLPIIGNMLQIDV-----KDICKSFTNFSKVYGPVFTVYFGMNPI 56
Query: 99 VISSEPETAKEIL--SSPAFADRPVKESAYELLFHRAMGF-APYGDYWRNLRRISATHLF 155
V+ E KE L + F+ R S + +G + G W+ +RR S T L
Sbjct: 57 VVFHGYEAVKEALIDNGEEFSGR--GNSPISQRITKGLGIISSNGKRWKEIRRFSLTTL- 113
Query: 156 SPRRIA----GIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSVFGKRY 211
R IE +E +VE+++ A + +L A N + VF KR+
Sbjct: 114 --RNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTF--ILGCAPCNVICSVVFQKRF 169
Query: 212 DFDXXXXXXXXXXXXXXXXXXXX--FNWSDHFPLLGWLDL-QGVKKRCRILVSKVNVFVE 268
D+ ++FPLL +D G + V+ ++
Sbjct: 170 DYKDQNFLTLMKRFNENFRILNSPWIQVCNNFPLL--IDCFPGTHNKVLKNVALTRSYIR 227
Query: 269 KIIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKE-----AKLNDSDMIAVLWEMIFRG 322
+ ++EH+ + V++ DF+D L+ +E+E ++ N +++ + ++ G
Sbjct: 228 EKVKEHQA--SLDVNNPR-----DFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAG 280
Query: 323 TDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRI 382
T+T + L + L ++ HPE+ +K Q EI V+G R D +PY A+V E R
Sbjct: 281 TETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRY 340
Query: 383 HPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDI 442
P D + +P GTT M + ++ HD + + P F P F++++
Sbjct: 341 SDLVP-TGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNG 399
Query: 443 SIMGSDLRLAPFGSGRR 459
+ SD PF +G+R
Sbjct: 400 NFKKSDY-FMPFSAGKR 415
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 297 LLDLEK-----EAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEI 351
L ++EK E+ ND ++ V+ ++ G T + L W L M+LHP++Q + Q EI
Sbjct: 254 LAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEI 313
Query: 352 ISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTT 411
V+G R + D +PY A++ E R P L + RD+ V +P GTT
Sbjct: 314 DDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVP-LGVTHMTSRDIEVQGFRIPKGTT 372
Query: 412 AMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
+ N+ ++ D VW +P +F PE F++ + + L PF +GRR
Sbjct: 373 LITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFL-PFSAGRR 419
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 183/436 (41%), Gaps = 40/436 (9%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
A+ + K GP P IG+ + L K++ R P+ +G R V+
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISE--RYGPVFTIHLGPRRVVVL 59
Query: 102 SEPETAKEILSSPA--FADRPVKESAYELLFHRAMGFAPYGDYWRNLRRISATHLFSPRR 159
+ +E L A F+ R +++ ++ +F G+ + LRR S
Sbjct: 60 CGHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFS--------- 109
Query: 160 IAGIESF---RREVGLKMVEQVKSL---MAGNGEVKVKKVLHFA-SLNNVMMS-VFGKRY 211
IA + F +R + ++ E+ L + G G + + +++NV+ S VFG R+
Sbjct: 110 IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
Query: 212 DFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWL--DLQGVKKRCRILVSKVNVFVEK 269
D+ + + + + L G +++ + + F+ K
Sbjct: 170 DYKDKEFLSLLRMMLGIFQFTST-STGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAK 228
Query: 270 IIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDS------DMIAVLWEMIFRGT 323
++ + +RT + DF+D L +E + N + +++ ++ GT
Sbjct: 229 KVEHN--QRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGT 281
Query: 324 DTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIH 383
+TV+ L + ++ HPE+++K EI V+G +R + D +PY++A++ E R
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFG 341
Query: 384 PPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDIS 443
P +S AR +D D F+P GT + ++ DP ++ P+ F P+ F+ E
Sbjct: 342 DVIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQ 400
Query: 444 IMGSDLRLAPFGSGRR 459
SD PF G+R
Sbjct: 401 FKKSDA-FVPFSIGKR 415
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 179/433 (41%), Gaps = 34/433 (7%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
A+ + K GP P IG+ + L K++ R P+ +G R V+
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISE--RYGPVFTIHLGPRRVVVL 59
Query: 102 SEPETAKEILSSPA--FADRPVKESAYELLFHRAMGFAPYGDYWRNLRRISATHLFSPRR 159
+ KE L A F+ R +++ ++ LF YG + N R FS
Sbjct: 60 CGHDAVKEALVDQAEEFSGRG-EQATFDWLF------KGYGVAFSNGERAKQLRRFSIAT 112
Query: 160 IAGIESFRREVGLKMVEQVKSL---MAGNGEVKVKKVLHFA-SLNNVMMS-VFGKRYDFD 214
+ G +R + ++ E+ L + G + + +++NV+ S VFG R+D++
Sbjct: 113 LRGFGVGKRGIEERIQEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYE 172
Query: 215 XXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWL--DLQGVKKRCRILVSKVNVFVEKIIQ 272
+ + + + L G +++ + + F+ K ++
Sbjct: 173 DKEFLSLLRMMLGSFQFTAT-STGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVE 231
Query: 273 EHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDS------DMIAVLWEMIFRGTDTV 326
+ +RT + DF+D L +E + N + +++ + F GT+TV
Sbjct: 232 HN--QRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETV 284
Query: 327 AILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPG 386
+ L + ++ HPE+++K EI V+G +R + D +PY +A++ E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDML 344
Query: 387 PLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMG 446
P + A +D D F+P GT + ++ DPR ++ P F P+ F+++
Sbjct: 345 P-MGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKK 403
Query: 447 SDLRLAPFGSGRR 459
SD PF G+R
Sbjct: 404 SDA-FVPFSIGKR 415
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 147/337 (43%), Gaps = 37/337 (10%)
Query: 140 GDYWRNLRRISATHLFSPRRIAGIESF---RREVGLKMVEQ----VKSLMAGNGEVKVKK 192
G+ WR LRR S +A + F +R V ++ E+ V+ L G +
Sbjct: 99 GERWRALRRFS---------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 VLHFASLNNVMMS-VFGKRYDFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWLD-LQ 250
+L + +N++ S VFGKR+D+ F+ G+L
Sbjct: 150 LLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP 209
Query: 251 GVKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKE-----A 304
G ++ + ++N F+ + +++HR T S+ DF+DV LL +EK+ +
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRA--TLDPSNPR-----DFIDVYLLRMEKDKSDPSS 262
Query: 305 KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDS 364
+ + ++I + + F GT+T + L + M+ +P + + Q EI V+G+ RP
Sbjct: 263 EFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALD 322
Query: 365 DIPSLPYLQAIVKETLRIHPPGPLLSWA--RLAVRDVYVGDNFVPAGTTAMVNMWAITHD 422
D +PY A++ E R+ G L+ + +D +P T + + HD
Sbjct: 323 DRAKMPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHD 379
Query: 423 PRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
PR + P F P F++ + ++ ++ PF G+R
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKR 415
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 147/337 (43%), Gaps = 37/337 (10%)
Query: 140 GDYWRNLRRISATHLFSPRRIAGIESF---RREVGLKMVEQ----VKSLMAGNGEVKVKK 192
G+ WR LRR S +A + F +R V ++ E+ V+ L G +
Sbjct: 99 GERWRALRRFS---------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 VLHFASLNNVMMS-VFGKRYDFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWLD-LQ 250
+L + +N++ S VFGKR+D+ F+ G+L
Sbjct: 150 LLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP 209
Query: 251 GVKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKE-----A 304
G ++ + ++N F+ + +++HR T S+ DF+DV LL +EK+ +
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRA--TLDPSNPR-----DFIDVYLLRMEKDKSDPSS 262
Query: 305 KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDS 364
+ + ++I + + F GT+T + L + M+ +P + + Q EI V+G+ RP
Sbjct: 263 EFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALD 322
Query: 365 DIPSLPYLQAIVKETLRIHPPGPLLSWA--RLAVRDVYVGDNFVPAGTTAMVNMWAITHD 422
D +PY A++ E R+ G L+ + +D +P T + + HD
Sbjct: 323 DRAKMPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHD 379
Query: 423 PRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
PR + P F P F++ + ++ ++ PF G+R
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKR 415
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 178/436 (40%), Gaps = 45/436 (10%)
Query: 46 AKAPKSIAGPPG---YPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVISS 102
AK S PPG P+IG++ + L L+ + P+ GL V+
Sbjct: 2 AKKTSSKGRPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYG--PVFTLYFGLKPIVVLH 59
Query: 103 EPETAKEILSS--PAFADR---PVKESAYELLFHRAMGFA-PYGDYWRNLRRISATHLFS 156
E KE L F+ R P+ E A +R G G W+ +RR S L +
Sbjct: 60 GYEAVKEALIDLGEEFSGRGIFPLAERA-----NRGFGIVFSNGKKWKEIRRFS---LMT 111
Query: 157 PRRIA----GIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSVFGKRYD 212
R IE +E +VE+++ A + +L A N + +F KR+D
Sbjct: 112 LRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTF--ILGCAPCNVICSIIFHKRFD 169
Query: 213 FDXXXXXXXXXXXXXXXXXXXX--FNWSDHFPLLGWLD-LQGVKKRCRILVSKVNVFVEK 269
+ ++FP L LD G + V+ + ++ +
Sbjct: 170 YKDQQFLNLMEKLNENIEILSSPWIQVYNNFPAL--LDYFPGTHNKLLKNVAFMKSYILE 227
Query: 270 IIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKEAKLNDSDMIAVLWE-----MIFRGT 323
++EH+ + +++ DF+D L+ +EKE S+ E + GT
Sbjct: 228 KVKEHQ--ESMDMNNPQ-----DFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGT 280
Query: 324 DTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIH 383
+T + L + L ++ HPE+ +K Q EI V+G +R D +PY A+V E R
Sbjct: 281 ETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYI 340
Query: 384 PPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDIS 443
P S D+ + +P GTT ++++ ++ HD + + PE F P F++E +
Sbjct: 341 DLLP-TSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGN 399
Query: 444 IMGSDLRLAPFGSGRR 459
S PF +G+R
Sbjct: 400 FKKSKY-FMPFSAGKR 414
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 147/337 (43%), Gaps = 37/337 (10%)
Query: 140 GDYWRNLRRISATHLFSPRRIAGIESF---RREVGLKMVEQ----VKSLMAGNGEVKVKK 192
G+ WR LRR S +A + F +R V ++ E+ V+ L G +
Sbjct: 99 GERWRALRRFS---------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 VLHFASLNNVMMS-VFGKRYDFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWLD-LQ 250
+L + +N++ S VFGKR+D+ F+ G+L
Sbjct: 150 LLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP 209
Query: 251 GVKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKE-----A 304
G ++ + ++N F+ + +++HR T S+ DF+DV LL +EK+ +
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRA--TLDPSNPR-----DFIDVYLLRMEKDKSDPSS 262
Query: 305 KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDS 364
+ + ++I + + F GT+T + L + M+ +P + + Q EI V+G+ RP
Sbjct: 263 EFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALD 322
Query: 365 DIPSLPYLQAIVKETLRIHPPGPLLSWA--RLAVRDVYVGDNFVPAGTTAMVNMWAITHD 422
D +PY A++ E R+ G L+ + +D +P T + + HD
Sbjct: 323 DRAKMPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHD 379
Query: 423 PRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
PR + P F P F++ + ++ ++ PF G+R
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKR 415
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 178/437 (40%), Gaps = 45/437 (10%)
Query: 42 ARARAKAPKSIAGPPGYPLIGSLTVFVGSTPHRVLAKLATAFRAVPLMAFSVGLTRFVIS 101
+ R K P GP P+IG++ + L L+ + P+ GL V+
Sbjct: 6 SSGRGKLP---PGPTPLPVIGNILQIGIKDISKSLTNLSKVYG--PVFTLYFGLKPIVVL 60
Query: 102 SEPETAKEILSS--PAFADR---PVKESAYELLFHRAMGFA-PYGDYWRNLRRISATHLF 155
E KE L F+ R P+ E A +R G G W+ +RR S L
Sbjct: 61 HGYEAVKEALIDLGEEFSGRGIFPLAERA-----NRGFGIVFSNGKKWKEIRRFS---LM 112
Query: 156 SPRRIA----GIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSVFGKRY 211
+ R IE +E +VE+++ A + +L A N + +F KR+
Sbjct: 113 TLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTF--ILGCAPCNVICSIIFHKRF 170
Query: 212 DFDXXXXXXXXXXXXXXXXXXXX--FNWSDHF-PLLGWLDLQGVKKRCRILVSKVNVFVE 268
D+ ++F P++ + G + V+ + ++
Sbjct: 171 DYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF--PGTHNKLLKNVAFMKSYIL 228
Query: 269 KIIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKEAKLNDSDMIAVLWE-----MIFRG 322
+ ++EH+ + +++ DF+D L+ +EKE S+ E + G
Sbjct: 229 EKVKEHQ--ESMDMNNPQ-----DFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAG 281
Query: 323 TDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRI 382
T+T + L + L ++ HPE+ +K Q EI V+G +R D +PY A+V E R
Sbjct: 282 TETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRY 341
Query: 383 HPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDI 442
P S D+ + +P GTT ++++ ++ HD + + PE F P F++E
Sbjct: 342 IDLLP-TSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGG 400
Query: 443 SIMGSDLRLAPFGSGRR 459
+ S PF +G+R
Sbjct: 401 NFKKSKY-FMPFSAGKR 416
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 258 ILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAVLWE 317
++ SK +++ + E L++ V D++ +L L ++K++ D+ A + E
Sbjct: 229 VIFSKADIYTQNFYWE--LRQKGSVHHDYR-------GILYRLLGDSKMSFEDIKANVTE 279
Query: 318 MIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVK 377
M+ G DT ++ L+W L M + ++Q +AE+++ ++ + + +P L+A +K
Sbjct: 280 MLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIK 339
Query: 378 ETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERF 437
ETLR+HP L R V D+ + D +PA T V ++A+ +P + +PE F P R+
Sbjct: 340 ETLRLHPISVTLQ--RYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRW 397
Query: 438 IEEDISIMGSDLRLAPFGSGRR 459
+ +D +I + R FG G R
Sbjct: 398 LSKDKNI--TYFRNLGFGWGVR 417
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 258 ILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAVLWE 317
++ SK +++ + E L++ V D++ +L L ++K++ D+ A + E
Sbjct: 232 VIFSKADIYTQNFYWE--LRQKGSVHHDYR-------GILYRLLGDSKMSFEDIKANVTE 282
Query: 318 MIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVK 377
M+ G DT ++ L+W L M + ++Q +AE+++ ++ + + +P L+A +K
Sbjct: 283 MLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIK 342
Query: 378 ETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERF 437
ETLR+HP L R V D+ + D +PA T V ++A+ +P + +PE F P R+
Sbjct: 343 ETLRLHPISVTLQ--RYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRW 400
Query: 438 IEEDISIMGSDLRLAPFGSGRR 459
+ +D +I + R FG G R
Sbjct: 401 LSKDKNI--TYFRNLGFGWGVR 420
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 146/337 (43%), Gaps = 37/337 (10%)
Query: 140 GDYWRNLRRISATHLFSPRRIAGIESF---RREVGLKMVEQ----VKSLMAGNGEVKVKK 192
G+ WR LRR S +A + F +R V ++ E+ V+ L G +
Sbjct: 99 GERWRALRRFS---------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 VLHFASLNNVMMS-VFGKRYDFDXXXXXXXXXXXXXXXXXXXXFNWSDHFPLLGWLD-LQ 250
+L + +N++ S VFGKR+D+ F+ G+L
Sbjct: 150 LLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP 209
Query: 251 GVKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKE-----A 304
G ++ + ++N F+ + +++HR T S+ DF+DV LL +EK+ +
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRA--TLDPSNPR-----DFIDVYLLRMEKDKSDPSS 262
Query: 305 KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDS 364
+ + ++I + + GT+T + L + M+ +P + + Q EI V+G+ RP
Sbjct: 263 EFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALD 322
Query: 365 DIPSLPYLQAIVKETLRIHPPGPLLSWA--RLAVRDVYVGDNFVPAGTTAMVNMWAITHD 422
D +PY A++ E R+ G L+ + +D +P T + + HD
Sbjct: 323 DRAKMPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHD 379
Query: 423 PRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
PR + P F P F++ + ++ ++ PF G+R
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKR 415
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 159/385 (41%), Gaps = 29/385 (7%)
Query: 87 PLMAFSVGLTRFVISSEPETAKEILSSP--AFADRPVKESAYELLFHRAMGFAPYGDY-- 142
P+ +GL V+ + T +E + FA RP + +Y+L+ R + GDY
Sbjct: 58 PVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP-QIPSYKLVSQRCQDIS-LGDYSL 115
Query: 143 -WRNLRRISATHLFSPRRIAGIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNN 201
W+ ++++ + L R + +E + ++ + E+++ + V ++K + +
Sbjct: 116 LWKAHKKLTRSALLLGTR-SSMEPWVDQLTQEFCERMR--VQAGAPVTIQKEFSLLTCSI 172
Query: 202 VMMSVFGKRYDFDXXXXXXXXXXXXXXXXXXXXFNWS----DHFPLLGWLDLQGVKKRCR 257
+ FG + D +WS D P L + G+ R +
Sbjct: 173 ICYLTFGNKED-----TLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLW-RLK 226
Query: 258 ILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAVLWE 317
+ + VEK ++ H+ AG D + V E +L + + + +
Sbjct: 227 QAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVD 286
Query: 318 MIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVG---NSRPVQDSDIPSLPYLQA 374
+ GT+T A L W +A ++ HPEIQ + Q E+ +G + V D LP L A
Sbjct: 287 LFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNA 346
Query: 375 IVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKP 434
+ E LR+ P PL R G + +P G + N+ D VW +P +F+P
Sbjct: 347 TIAEVLRLRPVVPLALPHRTTRPSSIFGYD-IPEGMVVIPNLQGAHLDETVWEQPHEFRP 405
Query: 435 ERFIEEDISIMGSDLRLAPFGSGRR 459
+RF+E G++ FG G R
Sbjct: 406 DRFLEP-----GANPSALAFGCGAR 425
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 88/165 (53%), Gaps = 4/165 (2%)
Query: 295 DVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISV 354
D L D+ ++ L+ ++ A + E+ +T A L WIL + +P+ Q + E+ SV
Sbjct: 268 DFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSV 327
Query: 355 VGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMV 414
+ +++ + D+ ++PYL+A +KE++R+ P P + R + +G+ +P GT +
Sbjct: 328 LPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTT--RTLDKPTVLGEYALPKGTVLTL 385
Query: 415 NMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
N + + + KF+PER+++++ I + PFG G+R
Sbjct: 386 NTQVLGSSEDNFEDSHKFRPERWLQKEKKI--NPFAHLPFGIGKR 428
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 292 DFVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEI 351
++ +L L K K+ D+ A + EM+ G +T ++ L+W L M +Q + E+
Sbjct: 258 NYPGILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEV 317
Query: 352 ISVVGNSRPVQDSDIPSL----PYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVP 407
+ N+R + DI + P L+A +KETLR+HP ++ R D+ + D +P
Sbjct: 318 L----NARRQAEGDISKMLQMVPLLKASIKETLRLHPIS--VTLQRYPESDLVLQDYLIP 371
Query: 408 AGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
A T V ++A+ DP ++ P+KF P R++ +D ++ R FG G R
Sbjct: 372 AKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLI--HFRNLGFGWGVR 421
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 137/340 (40%), Gaps = 43/340 (12%)
Query: 140 GDYWRNLRRISATHLFSPRRIAGIESFRREVGLKMVEQVKSLM----AGNGEVKVKKVLH 195
G+ W+ LRR S T + R G+ +R V ++ E+ + L+ G + L
Sbjct: 99 GNRWKVLRRFSVTTM----RDFGMG--KRSVEERIQEEAQCLIEELRKSKGALMDPTFLF 152
Query: 196 FASLNNVMMS-VFGKRYDF-DXXXXXXXXXXXXXXXXXXXXFN--------WSDHFPLLG 245
+ N++ S VFGKR+ + D F + HFP
Sbjct: 153 QSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFP--- 209
Query: 246 WLDLQGVKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDV-LLDLEKE- 303
G ++ + ++N ++ +++HR D +D LL +EKE
Sbjct: 210 -----GAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRD-------LIDTYLLHMEKEK 257
Query: 304 ----AKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSR 359
++ + ++ + F GT+T + L + M+ +P + + EI V+G R
Sbjct: 258 SNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHR 317
Query: 360 PVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAI 419
P + D +PY +A++ E R P + + + +P T + +
Sbjct: 318 PPELHDRAKMPYTEAVIYEIQRFSDLLP-MGVPHIVTQHTSFRGYIIPKDTEVFLILSTA 376
Query: 420 THDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
HDP + +P+ F P+ F++ + ++ ++ PF G+R
Sbjct: 377 LHDPHYFEKPDAFNPDHFLDANGALKKTEA-FIPFSLGKR 415
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 267 VEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTV 326
++KI QE R + ++ +L +A+L+ + A E+ DT
Sbjct: 245 IQKIYQELAFNRPQ-----------HYTGIVAELLLKAELSLEAIKANSMELTAGSVDTT 293
Query: 327 AILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPG 386
A L L + +P++Q + E ++ + LP L+A +KETLR++P G
Sbjct: 294 AFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVG 353
Query: 387 PLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMG 446
L R+ D+ + + +PAGT V ++++ + ++ PE++ P+R++ DI G
Sbjct: 354 LFLE--RVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL--DIRGSG 409
Query: 447 SDLRLAPFGSGRR 459
+ PFG G R
Sbjct: 410 RNFHHVPFGFGMR 422
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 23/214 (10%)
Query: 252 VKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDM 311
+R ++ +++ V++II E +R +G D D + LL EAK ++ D
Sbjct: 212 ANRRFNDALADLHLLVDEIIAE---RRASGQKPD------DLLTALL----EAKDDNGDP 258
Query: 312 IA------VLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSD 365
I + ++ G++T+A + W+L + HPE + + E+ +V G RPV D
Sbjct: 259 IGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFED 317
Query: 366 IPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRV 425
+ L + ++ E +R+ P +L+ R AV + +G +PAG + + +AI DP+
Sbjct: 318 VRKLRHTGNVIVEAMRLRPAVWVLT--RRAVAESELGGYRIPAGADIIYSPYAIQRDPKS 375
Query: 426 WAEPEKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
+ + +F P+R++ E + + + PF +G+R
Sbjct: 376 YDDNLEFDPDRWLPERAANV-PKYAMKPFSAGKR 408
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 145/347 (41%), Gaps = 23/347 (6%)
Query: 99 VISSEPETAKEILSSPAFAD-----RPVKESAYELLFHRAMGFAPYGDYWRNLRRISATH 153
VI + PE+ K+ L S + R ++ E LF + + + W RR+
Sbjct: 37 VIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVIDLA 96
Query: 154 LFSPRRIAGIESFRREVGLKMVEQVKSLMAGNGEVKVKKVLHFASLNNVMMSVFGKRYDF 213
++ +E+F E ++VE +++ G V ++ +L + +++ + + FG
Sbjct: 97 FSRSSLVSLMETFN-EKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSM 155
Query: 214 DXXXXX-XXXXXXXXXXXXXXXFNWSDHFPLLGWLDLQGVKKRCRILVSKVNVFVEKIIQ 272
N F L G +K+ R + + F+ ++ +
Sbjct: 156 LLGAQKPLSQAVKLMLEGITASRNTLAKF-------LPGKRKQLREVRESIR-FLRQVGR 207
Query: 273 EHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAILLEW 332
+ +R + ++ D + +L E+ A+ +D ++ G +T A L +
Sbjct: 208 DWVQRRREALKRGEEVP-ADILTQILKAEEGAQ-DDEGLLDNFVTFFIAGHETSANHLAF 265
Query: 333 ILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWA 392
+ + PEI ++ QAE+ V+G+ R + D+ L YL ++KE+LR++PP +W
Sbjct: 266 TVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPP----AWG 321
Query: 393 --RLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERF 437
RL + + VP T + + + + + +P F P+RF
Sbjct: 322 TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF 368
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 243 LLGWLDLQGVKKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLE- 301
L GWL L ++R R ++F K IQ+ R + + D + LLD
Sbjct: 193 LPGWLPLPSFRRRDRAHREIKDIFY-KAIQKRRQSQEK---------IDDILQTLLDATY 242
Query: 302 KEAK-LNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVG-NSR 359
K+ + L D ++ +L ++ G T + W+ + +Q K E +V G N
Sbjct: 243 KDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP 302
Query: 360 PVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAI 419
P+ + L L +KETLR+ P P++ R+A V +P G V+
Sbjct: 303 PLTYDQLKDLNLLDRCIKETLRLRP--PIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVN 360
Query: 420 THDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGR 458
W E F P+R+++++ + G PFG+GR
Sbjct: 361 QRLKDSWVERLDFNPDRYLQDNPA-SGEKFAYVPFGAGR 398
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 292 DFVDVLLDLEKEA---KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQ 348
D +DVL+ ++ E + + ++ + M+F G T + W L ++ H + +
Sbjct: 224 DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVI 283
Query: 349 AEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPA 408
E+ + G+ R V + +P L+ ++KETLR+HP PL+ R+A + V + +
Sbjct: 284 DELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIHE 341
Query: 409 GTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGR 458
G + P + +P F P R+ + + + PFG+GR
Sbjct: 342 GDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGR 391
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 292 DFVDVLLDLEKEA---KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQ 348
D +DVL+ ++ E + + ++ + M+F G T + W L ++ H + +
Sbjct: 224 DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVI 283
Query: 349 AEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPA 408
E+ + G+ R V + +P L+ ++KETLR+HP PL+ R+A + V + +
Sbjct: 284 DELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIHE 341
Query: 409 GTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGR 458
G + P + +P F P R+ + + + PFG+GR
Sbjct: 342 GDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGR 391
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 292 DFVDVLLDLEKEA---KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQ 348
D +DVL+ ++ E + + ++ + M+F G T + W L ++ H + +
Sbjct: 224 DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVI 283
Query: 349 AEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPA 408
E+ + G+ R V + +P L+ ++KETLR+HP PL+ R+A + V + +
Sbjct: 284 DELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIHE 341
Query: 409 GTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGR 458
G + P + +P F P R+ + + + PFG+GR
Sbjct: 342 GDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGR 391
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 292 DFVDVLLDLEKEA---KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQ 348
D +DVL+ ++ E + + ++ + M+F G T + W L ++ H + +
Sbjct: 224 DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVI 283
Query: 349 AEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPA 408
E+ + G+ R V + +P L+ ++KETLR+HP PL+ R+A + V + +
Sbjct: 284 DELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIHE 341
Query: 409 GTTAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPFGSGR 458
G + P + +P F P R+ + + + PFG+GR
Sbjct: 342 GDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGR 391
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 267 VEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTV 326
+E +I E R R + + C+ DF L+ EK L ++ + EM+ DT+
Sbjct: 255 IEVLIAEKR--RRISTEEKLEECM-DFATELILAEKRGDLTRENVNQCILEMLIAAPDTM 311
Query: 327 AILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPG 386
++ L ++L + HP ++ EI +V+G R ++ DI L ++ + E++R P
Sbjct: 312 SVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVV 370
Query: 387 PLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERF 437
L+ R A+ D + V GT ++N+ + H + +P +F E F
Sbjct: 371 DLV--MRKALEDDVIDGYPVKKGTNIILNIGRM-HRLEFFPKPNEFTLENF 418
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 253 KKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLL---DLEKEAKLNDS 309
K++ + + +N V+KII + ++ +G D D + +L D E L+D
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD------DLLTHMLNGKDPETGEPLDDE 252
Query: 310 DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSL 369
++ + + G + + LL + L +V +P + KA E V+ + P + L
Sbjct: 253 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-KQVKQL 311
Query: 370 PYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNF-VPAGTTAMVNMWAITHDPRVWAE 428
Y+ ++ E LR+ P GP S A D +G + + G MV + + D +W +
Sbjct: 312 KYVGMVLNEALRLWPTGPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGD 369
Query: 429 P-EKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
E+F+PERF E+ S + PFG+G+R
Sbjct: 370 DVEEFRPERF--ENPSAIPQHA-FKPFGNGQR 398
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 253 KKRCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLL---DLEKEAKLNDS 309
K++ + + +N V+KII + ++ +G D D + +L D E L+D
Sbjct: 203 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD------DLLTHMLNGKDPETGEPLDDE 253
Query: 310 DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSL 369
++ + + G + + LL + L +V +P + KA E V+ + P + L
Sbjct: 254 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY-KQVKQL 312
Query: 370 PYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNF-VPAGTTAMVNMWAITHDPRVWAE 428
Y+ ++ E LR+ P GP S A D +G + + G MV + + D +W +
Sbjct: 313 KYVGMVLNEALRLWPTGPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGD 370
Query: 429 P-EKFKPERFIEEDISIMGSDLRLAPFGSGRR 459
E+F+PERF E+ S + PFG+G+R
Sbjct: 371 DVEEFRPERF--ENPSAIPQHA-FKPFGNGQR 399
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 373 QAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKF 432
+ V+E R +P GP L L +D + GT+ +++++ HDPR+W P++F
Sbjct: 277 EMFVQEVRRYYPFGPFL--GALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEF 334
Query: 433 KPERFIEEDISIMGSDLRLAPFGSG 457
+PERF E + ++ + P G G
Sbjct: 335 RPERFAEREENLFD----MIPQGGG 355
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 318 MIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVK 377
++F G +T+ L + H +I+ + + E + + S+ + + +PYL +++
Sbjct: 251 LLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQ-NKLQLSQELTAETLKKMPYLDQVLQ 309
Query: 378 ETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPERF 437
E LR+ PP + R ++D P G + DP ++ +PEKF PERF
Sbjct: 310 EVLRLIPP--VGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF 367
Query: 438 IEEDISIMGSDLRLAPFGSGRR 459
+ + PFG G R
Sbjct: 368 TPDGSATHNPPFAHVPFGGGLR 389
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 42/197 (21%)
Query: 287 KICVGDFVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSK 346
++ + D + DLEK AK + + VLW +T+ W L +M+ +PE
Sbjct: 243 RMFLNDTLSTFDDLEK-AKTH----LVVLWA---SQANTIPATF-WSLFQMIRNPEAMKA 293
Query: 347 AQAEI----------ISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAV 396
A E+ +S+ GN + +++ LP L +I+KE+LR LS A L +
Sbjct: 294 ATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR-------LSSASLNI 346
Query: 397 R------DVYVGDNFVPAGTTAMVNMW-AITH-DPRVWAEPEKFKPERFIEED----ISI 444
R +++ D ++ ++ + H DP ++ +P FK +R+++E+ +
Sbjct: 347 RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTF 406
Query: 445 MGSDLRLA----PFGSG 457
+ L+L PFGSG
Sbjct: 407 YCNGLKLKYYYMPFGSG 423
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 42/197 (21%)
Query: 287 KICVGDFVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSK 346
++ + D + DLEK AK + + VLW +T+ W L +M+ +PE
Sbjct: 243 RMFLNDTLSTFDDLEK-AKTH----LVVLWA---SQANTIPATF-WSLFQMIRNPEAMKA 293
Query: 347 AQAEI----------ISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAV 396
A E+ +S+ GN + +++ LP L +I+KE+LR LS A L +
Sbjct: 294 ATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR-------LSSASLNI 346
Query: 397 R------DVYVGDNFVPAGTTAMVNMW-AITH-DPRVWAEPEKFKPERFIEED----ISI 444
R +++ D ++ ++ + H DP ++ +P FK +R+++E+ +
Sbjct: 347 RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTF 406
Query: 445 MGSDLRLA----PFGSG 457
+ L+L PFGSG
Sbjct: 407 YCNGLKLKYYYMPFGSG 423
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 374 AIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFK 433
A+++ET+R PP L+S R A D+ +G + VP G T ++ + A DP + P++F
Sbjct: 291 AVIEETMRYDPPVQLVS--RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 434 PER 436
P+R
Sbjct: 349 PDR 351
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 255 RCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAV 314
RCR +++ + +II R K A ++ +G + + +++ ++ +
Sbjct: 205 RCREARAELQKILGEIIVA-REKEEASKDNNTSDLLGGLLKAVY--RDGTRMSLHEVCGM 261
Query: 315 LWEMIFRGTDTVAILLEWILARMVLHPEIQ---SKAQAEIISVVGNSRPVQ---DSDIPS 368
+ +F G T I W + + +HP+ + K EI + P Q D+ +
Sbjct: 262 IVAAMFAGQHTSTITTSWSMLHL-MHPKNKKWLDKLHKEI-----DEFPAQLNYDNVMDE 315
Query: 369 LPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAE 428
+P+ + V+E++R PP LL R+ +V VG VP G + HD +
Sbjct: 316 MPFAERCVRESIRRDPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPN 373
Query: 429 PEKFKPERFIEEDISIMGSDLRLAPFGSG 457
P + PER + D + +G FG+G
Sbjct: 374 PRLWDPERDEKVDGAFIG-------FGAG 395
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 255 RCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAV 314
RCR +++ + +II R K A ++ +G + + +++ ++ +
Sbjct: 199 RCREARAELQKILGEIIVA-REKEEASKDNNTSDLLGGLLKAVY--RDGTRMSLHEVCGM 255
Query: 315 LWEMIFRGTDTVAILLEWILARMVLHPEIQ---SKAQAEIISVVGNSRPVQ---DSDIPS 368
+ +F G T I W + + +HP+ + K EI + P Q D+ +
Sbjct: 256 IVAAMFAGQHTSTITTSWSMLHL-MHPKNKKWLDKLHKEI-----DEFPAQLNYDNVMDE 309
Query: 369 LPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAE 428
+P+ + V+E++R PP LL R+ +V VG VP G + HD +
Sbjct: 310 MPFAERCVRESIRRDPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPN 367
Query: 429 PEKFKPERFIEEDISIMGSDLRLAPFGSG 457
P + PER + D + +G FG+G
Sbjct: 368 PRLWDPERDEKVDGAFIG-------FGAG 389
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 255 RCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAV 314
RCR +++ + +II R K A ++ +G + + +++ ++ +
Sbjct: 214 RCREARAELQKILGEIIVA-REKEEASKDNNTSDLLGGLLKAVY--RDGTRMSLHEVCGM 270
Query: 315 LWEMIFRGTDTVAILLEWILARMVLHPEIQ---SKAQAEIISVVGNSRPVQ---DSDIPS 368
+ +F G T I W + + +HP+ + K EI + P Q D+ +
Sbjct: 271 IVAAMFAGQHTSTITTSWSMLHL-MHPKNKKWLDKLHKEI-----DEFPAQLNYDNVMDE 324
Query: 369 LPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAE 428
+P+ + V+E++R PP LL R+ +V VG VP G + HD +
Sbjct: 325 MPFAERCVRESIRRDPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPN 382
Query: 429 PEKFKPERFIEEDISIMGSDLRLAPFGSG 457
P + PER + D + +G FG+G
Sbjct: 383 PRLWDPERDEKVDGAFIG-------FGAG 404
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 371 YLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPE 430
Y + V+E R +P GP + AR + + G F P G +++++ HD WA+P+
Sbjct: 273 YAELFVQEVRRFYPFGPAVV-ARASQDFEWEGMAF-PEGRQVVLDLYGSNHDAATWADPQ 330
Query: 431 KFKPERF 437
+F+PERF
Sbjct: 331 EFRPERF 337
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 11/85 (12%)
Query: 377 KETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAIT--HDPRVWAEPEKFKP 434
+E LR++PP +L+ R R + +G++ +P GTT +++ + H P + E F+P
Sbjct: 259 QEALRLYPPAWILT--RRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFP----DGEAFRP 312
Query: 435 ERFIEEDISIMGSDLRLAPFGSGRR 459
ERF+EE + G R PFG G+R
Sbjct: 313 ERFLEERGTPSG---RYFPFGLGQR 334
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 278 RTAGVSDDHKICVGD-FVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILAR 336
R A + +D ++ GD D LLD + ++ +S+ IA + ++F +AI +++A
Sbjct: 187 RVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATI--LVFYAVGHMAI--GYLIAS 242
Query: 337 MVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAV 396
+ E+ ++ + E+ + N + AI+ E +R+ PP LS+ R
Sbjct: 243 GI---ELFAR-RPEVFTAFRNDESAR----------AAIINEMVRMDPPQ--LSFLRFPT 286
Query: 397 RDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPER 436
DV +G + AG+ + A DP V+ +P+ F R
Sbjct: 287 EDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 326
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 278 RTAGVSDDHKICVGD-FVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILAR 336
R A + +D ++ GD D LLD + ++ +S+ IA + ++F +AI +++A
Sbjct: 189 RVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATI--LVFYAVGHMAI--GYLIAS 244
Query: 337 MVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAV 396
+ E+ ++ + E+ + N + AI+ E +R+ PP LS+ R
Sbjct: 245 GI---ELFAR-RPEVFTAFRNDESAR----------AAIINEMVRMDPPQ--LSFLRFPT 288
Query: 397 RDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPER 436
DV +G + AG+ + A DP V+ +P+ F R
Sbjct: 289 EDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 328
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 8/130 (6%)
Query: 310 DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQ---DSDI 366
++ ++ +F G T +I W + + +HP + E + P Q ++ +
Sbjct: 254 EVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP--ANVKHLEALRKEIEEFPAQLNYNNVM 310
Query: 367 PSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVW 426
+P+ + +E++R PP LL R + DV VG VP G + HD +
Sbjct: 311 DEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAF 368
Query: 427 AEPEKFKPER 436
EP ++ PER
Sbjct: 369 PEPRRWDPER 378
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 8/130 (6%)
Query: 310 DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQ---DSDI 366
++ ++ +F G T +I W + + +HP + E + P Q ++ +
Sbjct: 253 EVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP--ANVKHLEALRKEIEEFPAQLNYNNVM 309
Query: 367 PSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVW 426
+P+ + +E++R PP LL R + DV VG VP G + HD +
Sbjct: 310 DEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAF 367
Query: 427 AEPEKFKPER 436
EP ++ PER
Sbjct: 368 PEPRRWDPER 377
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 8/130 (6%)
Query: 310 DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQ---DSDI 366
++ ++ +F G T +I W + + +HP + E + P Q ++ +
Sbjct: 252 EVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP--ANVKHLEALRKEIEEFPAQLNYNNVM 308
Query: 367 PSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVW 426
+P+ + +E++R PP LL R + DV VG VP G + HD +
Sbjct: 309 DEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAF 366
Query: 427 AEPEKFKPER 436
EP ++ PER
Sbjct: 367 PEPRRWDPER 376
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 8/130 (6%)
Query: 310 DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQ---DSDI 366
++ ++ +F G T +I W + + +HP + E + P Q ++ +
Sbjct: 253 EVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP--ANVKHLEALRKEIEEFPAQLNYNNVM 309
Query: 367 PSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVW 426
+P+ + +E++R PP LL R + DV VG VP G + HD +
Sbjct: 310 DEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAF 367
Query: 427 AEPEKFKPER 436
EP ++ PER
Sbjct: 368 PEPRRWDPER 377
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Query: 310 DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQA-----EIISVVGNSRPVQDS 364
++ ++ +F G T +I W + + +HP +A E N V D
Sbjct: 266 EVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEIEEFPAQLNYNNVMDE 324
Query: 365 DIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPR 424
+P+ + +E++R PP LL R + DV VG VP G + HD
Sbjct: 325 ----MPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 378
Query: 425 VWAEPEKFKPER 436
+ EP ++ PER
Sbjct: 379 AFPEPRRWDPER 390
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Query: 310 DMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQA-----EIISVVGNSRPVQDS 364
++ ++ +F G T +I W + + +HP +A E N V D
Sbjct: 266 EVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEIEEFPAQLNYNNVMDE 324
Query: 365 DIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPR 424
+P+ + +E++R PP LL R + DV VG VP G + HD
Sbjct: 325 ----MPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 378
Query: 425 VWAEPEKFKPER 436
+ EP ++ PER
Sbjct: 379 AFPEPRRWDPER 390
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 377 KETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPER 436
+E LR++PP +L+ R R + +G++ +P GTT +++ + + E E F+PER
Sbjct: 259 QEALRLYPPAWILT--RRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPER 314
Query: 437 FIEEDISIMGSDLRLAPFGSGRR 459
F+ E + G R PFG G+R
Sbjct: 315 FLAERGTPSG---RYFPFGLGQR 334
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 296 VLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAIL----LEWI-LARMVLHPEIQSKAQAE 350
V+ EK D + +L+ + F V IL L+WI LA LH ++ + +
Sbjct: 251 VMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGA 310
Query: 351 IISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGT 410
I S + V I +P +++V E+LRI PP P + + D
Sbjct: 311 IKSYGDGN--VTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKK 368
Query: 411 TAMVNMWA--ITHDPRVWAEPEKFKPERFIEEDISIM 445
M+ + T DP+V+ PE++ P+RF+ + +++
Sbjct: 369 GEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALL 405
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 371 YLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPE 430
Y + V+E R +P P + AR + + G F P G +++++ HD WA+P+
Sbjct: 265 YAELFVQEVRRFYPFFPAVV-ARASQDFEWEGMAF-PEGRQVVLDLYGSNHDAATWADPQ 322
Query: 431 KFKPERF 437
+F+PERF
Sbjct: 323 EFRPERF 329
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 371 YLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPE 430
Y + V+E R +P P + AR + + G F P G +++++ HD WA+P+
Sbjct: 265 YAELFVQEVRRFYPFFPAVV-ARASQDFEWEGMAF-PEGRQVVLDLYGSNHDAATWADPQ 322
Query: 431 KFKPERF 437
+F+PERF
Sbjct: 323 EFRPERF 329
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 371 YLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPE 430
Y + V+E R +P P + AR + + G F P G +++++ HD WA+P+
Sbjct: 265 YAELFVQEVRRFYPFFPAVV-ARASQDFEWEGMAF-PEGRQVVLDLYGSNHDAATWADPQ 322
Query: 431 KFKPERF 437
+F+PERF
Sbjct: 323 EFRPERF 329
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 371 YLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPE 430
Y + V+E R +P P + AR + + G F P G +++++ HD WA+P+
Sbjct: 273 YAELFVQEVRRFYPFFPAVV-ARASQDFEWEGMAF-PEGRQVVLDLYGSNHDAATWADPQ 330
Query: 431 KFKPERF 437
+F+PERF
Sbjct: 331 EFRPERF 337
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 371 YLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPE 430
Y + V+E R +P P + AR + + G F P G +++++ HD WA+P+
Sbjct: 273 YAELFVQEVRRFYPFFPAVV-ARASQDFEWEGMAF-PEGRQVVLDLYGSNHDAATWADPQ 330
Query: 431 KFKPERF 437
+F+PERF
Sbjct: 331 EFRPERF 337
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 301 EKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRP 360
E L D+++++ L M+ G +T L+ + + HPE ++ + + G +
Sbjct: 222 ENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRA------LVLSGEAE- 274
Query: 361 VQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAIT 420
A+V+ETLR P + R A DV VGD +PAG +V+ A+
Sbjct: 275 -----------WSAVVEETLRFSTPTSHV-LIRFAAEDVPVGDRVIPAGDALIVSYGALG 322
Query: 421 HDPR 424
D R
Sbjct: 323 RDER 326
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 29/171 (16%)
Query: 292 DFVDVLLDLEKEA-KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAE 350
D + +L E E L+D D++A++ ++ T+ L ++ ++ +PE + A+
Sbjct: 239 DLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD 298
Query: 351 IISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGT 410
S +P + ETLR PP L+ R +D VG + T
Sbjct: 299 ------------RSLVPR------AIAETLRYKPPVQLI--PRQLSQDTVVGGMEIKKDT 338
Query: 411 TAMVNMWAITHDPRVWAEPEKFKPERFIEEDISIM----GSDLRLAPFGSG 457
+ A DP + +P+ F R ED+ I G+ LA FGSG
Sbjct: 339 IVFCMIGAANRDPEAFEQPDVFNIHR---EDLGIKSAFSGAARHLA-FGSG 385
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 11/185 (5%)
Query: 255 RCRILVSKVNVFVEKIIQEHRLKRTAGVSDDHKICVGDFVDVLLDLEKEAKLNDSDMIAV 314
RCR +++ + +II + ++ + G V D +++ ++ +
Sbjct: 200 RCRDARAELQDILSEIIIAREKEEAQKDTNTSDLLAGLLGAVYRD---GTRMSQHEVCGM 256
Query: 315 LWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQ---DSDIPSLPY 371
+ +F G T I W L ++ + ++K + + P Q D+ + +P+
Sbjct: 257 IVAAMFAGQHTSTITTTWSLLHLM---DPRNKRHLAKLHQEIDEFPAQLNYDNVMEEMPF 313
Query: 372 LQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEK 431
+ +E++R PP L+ R ++ V VG VP G + D + P +
Sbjct: 314 AEQCARESIRRDPP--LVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPRE 371
Query: 432 FKPER 436
+ PER
Sbjct: 372 WNPER 376
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 372 LQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEK 431
L IV+E +R P+ + R A D + + AG M+N A HDP + EP K
Sbjct: 322 LPGIVEEAIRWT--TPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 432 FKPER 436
F P R
Sbjct: 380 FDPTR 384
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 330 LEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLL 389
+++I+ ++ E + +I V+ + + D +L V+ETLR + P L
Sbjct: 179 IKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDD---ALKNRSGFVEETLRYYSPIQFL 235
Query: 390 SWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPER 436
R A D Y+ + + G +V + + D + EP+ FK R
Sbjct: 236 PH-RFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 19/135 (14%)
Query: 302 KEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPV 361
+E L+ + ++++ + ++ G +T A ++ + ++ HPE Q ++ P+
Sbjct: 226 QEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPE-----QLTVVKANPGRTPM 280
Query: 362 QDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITH 421
V+E LR ++ +RLA DV +G + AG +V+M +
Sbjct: 281 A-------------VEELLRYFTIADGVT-SRLATEDVEIGGVSIKAGEGVIVSMLSANW 326
Query: 422 DPRVWAEPEKFKPER 436
DP V+ +P ER
Sbjct: 327 DPAVFKDPAVLDVER 341
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 290 VGDFVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQA 349
+G +V L D +A++ M+ LW + +G A W++ ++ HPE +
Sbjct: 237 LGSYVKQLQDEGIDAEMQRRAMLLQLW--VTQGNAGPAAF--WVMGYLLTHPEALRAVRE 292
Query: 350 EIISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAG 409
EI G + + P +++ ETLR L+ A L RDV +
Sbjct: 293 EI---QGGKHLRLEERQKNTPVFDSVLWETLR-------LTAAALITRDVTQDKKICLSN 342
Query: 410 TT----------AMVNMWAITHDPRVWAEPEKFKPERFIEED 441
+ + DP++ +PE F+ +RF+ D
Sbjct: 343 GQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNAD 384
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 342 EIQSKAQAEIISVV-GNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVY 400
++ ++ EI SV+ N + I + +++V E LR PP + + A +D+
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPP--VTAQYGRAKKDLV 373
Query: 401 VGDN----FVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEED 441
+ + V AG T DP+++ ++F PERF+ E+
Sbjct: 374 IESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE 418
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 342 EIQSKAQAEIISVV-GNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVY 400
++ ++ EI SV+ N + I + +++V E LR PP + + A +D+
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPP--VTAQYGRAKKDLV 373
Query: 401 VGDN----FVPAGTTAMVNMWAITHDPRVWAEPEKFKPERFIEED 441
+ + V AG T DP+++ ++F PERF+ E+
Sbjct: 374 IESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE 418
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 372 LQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAIT--HDPRVWAEP 429
+ AIV+E LR PP P + R + V +PA MVN W ++ D +P
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ--RTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDP 349
Query: 430 EKFKPER 436
++F P R
Sbjct: 350 DRFDPSR 356
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 372 LQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAIT--HDPRVWAEP 429
+ AIV+E LR PP P + R + V +PA MVN W ++ D +P
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ--RTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDP 329
Query: 430 EKFKPER 436
++F P R
Sbjct: 330 DRFDPSR 336
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 371 YLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPE 430
YL+AI +E LR PP ++ R V +GD + G V + + D V+ + E
Sbjct: 240 YLKAI-EEALRYSPP--VMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGE 296
Query: 431 KFKPER 436
KF P+R
Sbjct: 297 KFIPDR 302
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 371 YLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPE 430
YL+AI +E LR PP ++ R V +GD + G V + + D V+ + E
Sbjct: 240 YLKAI-EEALRYSPP--VMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGE 296
Query: 431 KFKPER 436
KF P+R
Sbjct: 297 KFIPDR 302
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 23/138 (16%)
Query: 304 AKLNDSDMIA-----VLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNS 358
++LND ++ + ++F G D+VA +++ + + HP+ ++ A A
Sbjct: 219 SRLNDGELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALA--------- 269
Query: 359 RPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWA 418
D D+ + V+E LR G + R A D+ G + AG + ++
Sbjct: 270 ----DPDV-----MARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGL 320
Query: 419 ITHDPRVWAEPEKFKPER 436
D R + PE+F R
Sbjct: 321 PNFDERAFTGPEEFDAAR 338
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 374 AIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFK 433
A V+E +R PP + + R A D+ +GD+ +P G+ + + + DP + +P+
Sbjct: 289 AAVEELMRYDPP--VQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD 346
Query: 434 PERFIEEDI 442
R E +
Sbjct: 347 VHRAAERQV 355
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 376 VKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFK 433
V+E LR P P+ + R+A D V +P GT + DPRV+A+ ++F
Sbjct: 290 VEEVLRWSPTLPVTA-TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFD 346
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 376 VKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFK 433
V+E LR P P+ + R+A D V +P GT + DPRV+A+ ++F
Sbjct: 280 VEEVLRWSPTLPVTA-TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFD 336
>pdb|1B3O|A Chain A, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1B3O|B Chain B, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1NF7|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NF7|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NFB|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
pdb|1NFB|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
Length = 514
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 153 HLFSPRRIAGIESFRREVGLKMVEQVKSLMAGNGEVKVKK 192
H F P IAGI+ +++G K + QV+++M +GE+K +K
Sbjct: 454 HKFVPYLIAGIQHSCQDIGAKSLTQVRAMMY-SGELKFEK 492
>pdb|1JR1|A Chain A, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
pdb|1JR1|B Chain B, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
Length = 514
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 153 HLFSPRRIAGIESFRREVGLKMVEQVKSLMAGNGEVKVKK 192
H F P IAGI+ +++G K + QV+++M +GE+K +K
Sbjct: 454 HKFVPYLIAGIQHSCQDIGAKSLTQVRAMMY-SGELKFEK 492
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 376 VKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
V+E LR+ P+ AR RDV +GD +PAG ++ + D R +
Sbjct: 287 VEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYG 336
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 376 VKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
V+E LR+ P+ AR RDV +GD +PAG ++ + D R +
Sbjct: 286 VEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYG 335
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 376 VKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
V+E LR+ P+ AR RDV +GD +PAG ++ + D R +
Sbjct: 286 VEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYG 335
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 26/130 (20%)
Query: 332 WILARMVLHPEIQSKAQAEIISVVGNS-RPV-QDSDIP-----SLPYLQAIVKETLRIHP 384
W+L ++ +PE + + E+ S++ + +PV Q + +P S P L +++ E+LR
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLR--- 340
Query: 385 PGPLLSWARLAVRDVYVGDNFVPAGTTAMVNM-----------WAITHDPRVWAEPEKFK 433
L+ A R+V V D +P N+ + DP ++ +PE FK
Sbjct: 341 ----LTAAPFITREVVV-DLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFK 395
Query: 434 PERFIEEDIS 443
RF+ D S
Sbjct: 396 YNRFLNPDGS 405
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 376 VKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPE 435
V+E LR PP ++ R+ V + D + G V + + D V+ +P+ F P+
Sbjct: 244 VEEALRFSPP--VMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPD 301
Query: 436 R 436
R
Sbjct: 302 R 302
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 26/130 (20%)
Query: 332 WILARMVLHPEIQSKAQAEIISVVGNS-RPV-QDSDIP-----SLPYLQAIVKETLRIHP 384
W+L ++ +PE + + E+ S++ + +PV Q + +P S P L +++ E+LR
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLR--- 328
Query: 385 PGPLLSWARLAVRDVYVGDNFVPAGTTAMVNM-----------WAITHDPRVWAEPEKFK 433
L+ A R+V V D +P N+ + DP ++ +PE FK
Sbjct: 329 ----LTAAPFITREVVV-DLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFK 383
Query: 434 PERFIEEDIS 443
RF+ D S
Sbjct: 384 YNRFLNPDGS 393
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 20/146 (13%)
Query: 292 DFVDVLLDLEK-EAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAE 350
D + L+ E + ++D ++ ++ DT A ++ A ++ P+ Q E
Sbjct: 207 DLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPD-QLALLRE 265
Query: 351 IISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGT 410
S+VGN+ V+E LR G R+A RDV +G + G
Sbjct: 266 DPSLVGNA-----------------VEELLRYLTIGQF-GGERVATRDVELGGVRIAKGE 307
Query: 411 TAMVNMWAITHDPRVWAEPEKFKPER 436
+ ++ A DP EPE+F R
Sbjct: 308 QVVAHVLAADFDPAFVEEPERFDITR 333
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 20/146 (13%)
Query: 292 DFVDVLLDLEK-EAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAE 350
D + L+ E + ++D ++ ++ DT A ++ A ++ P+ Q E
Sbjct: 207 DLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPD-QLALLRE 265
Query: 351 IISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGT 410
S+VGN+ V+E LR G R+A RDV +G + G
Sbjct: 266 DPSLVGNA-----------------VEELLRYLTIGQF-GGERVATRDVELGGVRIAKGE 307
Query: 411 TAMVNMWAITHDPRVWAEPEKFKPER 436
+ ++ A DP EPE+F R
Sbjct: 308 QVVAHVLAADFDPAFVEEPERFDITR 333
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 20/146 (13%)
Query: 292 DFVDVLLDLEK-EAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAE 350
D + L+ E + ++D ++ ++ DT A ++ A ++ P+ Q E
Sbjct: 207 DLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPD-QLALLRE 265
Query: 351 IISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGT 410
S+VGN+ V+E LR G R+A RDV +G + G
Sbjct: 266 DPSLVGNA-----------------VEELLRYLTIGQF-GGERVATRDVELGGVRIAKGE 307
Query: 411 TAMVNMWAITHDPRVWAEPEKFKPER 436
+ ++ A DP EPE+F R
Sbjct: 308 QVVAHVLAADFDPAFVEEPERFDITR 333
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 358 SRPVQDSDIPSLPYLQA-IVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNM 416
SRP + S P ++ + E LR P + +R+A+ DV + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 417 WAITHDPRVWAEPEKFKPER 436
A DP V+ +P++ ER
Sbjct: 319 LAANRDPEVFPDPDRIDFER 338
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 358 SRPVQDSDIPSLPYLQA-IVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNM 416
SRP + S P ++ + E LR P + +R+A+ DV + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 417 WAITHDPRVWAEPEKFKPER 436
A DP V+ +P++ ER
Sbjct: 319 LAANRDPEVFPDPDRIDFER 338
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 358 SRPVQDSDIPSLPYLQA-IVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNM 416
SRP + S P ++ + E LR P + +R+A+ DV + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 417 WAITHDPRVWAEPEKFKPER 436
A DP V+ +P++ ER
Sbjct: 319 LAANRDPEVFPDPDRIDFER 338
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 358 SRPVQDSDIPSLPYLQA-IVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNM 416
SRP + S P ++ + E LR P + +R+A+ DV + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 417 WAITHDPRVWAEPEKFKPER 436
A DP V+ +P++ ER
Sbjct: 319 LAANRDPEVFPDPDRIDFER 338
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 358 SRPVQDSDIPSLPYLQA-IVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNM 416
SRP + S P ++ + E LR P + +R+A+ DV + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 417 WAITHDPRVWAEPEKFKPER 436
A DP V+ +P++ ER
Sbjct: 319 LAANRDPEVFPDPDRIDFER 338
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 358 SRPVQDSDIPSLPYLQA-IVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNM 416
SRP + S P ++ + E LR P + +R+A+ DV + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 417 WAITHDPRVWAEPEKFKPER 436
A DP V+ +P++ ER
Sbjct: 319 LAANRDPEVFPDPDRIDFER 338
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 358 SRPVQDSDIPSLPYLQA-IVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNM 416
SRP + S P ++ + E LR P + +R+A+ DV + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 417 WAITHDPRVWAEPEKFKPER 436
A DP V+ +P++ ER
Sbjct: 319 LAANRDPEVFPDPDRIDFER 338
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 373 QAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKF 432
Q V E LR+HP L R A +V +G++ + G +V + A DP V+AEP++
Sbjct: 256 QRTVAEVLRLHPA--LHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRL 313
Query: 433 KPER 436
+R
Sbjct: 314 DVDR 317
>pdb|2EK8|A Chain A, Aminopeptidase From Aneurinibacillus Sp. Strain Am-1
pdb|2EK9|A Chain A, Aminopeptidase From Aneurinibacillus Sp. Strain Am-1 With
Bestatin
Length = 421
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 411 TAMVNMWA----ITHDPRVWAEPEKFKPERFIEEDISIMGSDLRLAPF 454
T NM+ ++ PRV PE+ K R+IE+ G + + PF
Sbjct: 13 TDAENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEVQPF 60
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 292 DFVDVLLDLEKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEI 351
D + ++LD ++ +++++ + IF G +TVA + + ++ HP+ Q ++
Sbjct: 204 DLLALMLDAHDRGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPD-----QLDL 258
Query: 352 ISVVGNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTT 411
+ RP L V+E LR P + S R DV + +
Sbjct: 259 L----RRRP---------DLLAQAVEECLRYDP--SVQSNTRQLDVDVELRGRRLRRDDV 303
Query: 412 AMVNMWAITHDPRVWAEPEKFKPER 436
+V A DPR + P+ F ER
Sbjct: 304 VVVLAGAANRDPRRYDRPDDFDIER 328
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 372 LQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEK 431
+ +V+E LR P + R+ DV + +P+GT + + A DP + +P+
Sbjct: 287 VDTVVEEVLRWTSPA--MHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDT 344
Query: 432 FKPER 436
F P R
Sbjct: 345 FLPGR 349
>pdb|3UCL|A Chain A, Cyclohexanone-Bound Crystal Structure Of Cyclohexanone
Monooxygenase In The Rotated Conformation
Length = 573
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 100 ISSEPETAKEILSSPAFADRPVKESAYELLFHR 132
I +PETA++++ FA RP+ +S Y +++R
Sbjct: 343 IIEDPETARKLMPKGLFAKRPLCDSGYYEVYNR 375
>pdb|3GWD|A Chain A, Closed Crystal Structure Of Cyclohexanone Monooxygenase
pdb|3GWF|A Chain A, Open Crystal Structure Of Cyclohexanone Monooxygenase
Length = 540
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 100 ISSEPETAKEILSSPAFADRPVKESAYELLFHR 132
I +PETA++++ FA RP+ +S Y +++R
Sbjct: 310 IIEDPETARKLMPKGLFAKRPLCDSGYYEVYNR 342
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 387 PLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPER 436
P+ ++ R R+V +G + G ++ + + DPR W++P+ + R
Sbjct: 295 PVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITR 344
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 387 PLLSWARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKF 432
P+ ++ R RDV + + G ++ + + DPR W +P+++
Sbjct: 297 PVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRY 342
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 372 LQAIVKETLRIHPPGPLLSWA----RLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
+ A V+E LRI+ LS+A RLA D+ VGD V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 428 EPEKFKPER 436
P + +R
Sbjct: 321 NPGSIELDR 329
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 372 LQAIVKETLRIHPPGPLLSWA----RLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
+ A V+E LRI+ LS+A RLA D+ VGD V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 428 EPEKFKPER 436
P + +R
Sbjct: 321 NPGSIELDR 329
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 372 LQAIVKETLRIHPPGPLLSWA----RLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
+ A V+E LRI+ LS+A RLA D+ VGD V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 428 EPEKFKPER 436
P + +R
Sbjct: 321 NPGSIELDR 329
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 372 LQAIVKETLRIHPPGPLLSWA----RLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
+ A V+E LRI+ LS+A RLA D+ VGD V G +V + DP +
Sbjct: 265 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 319
Query: 428 EPEKFKPER 436
P + +R
Sbjct: 320 NPGSIELDR 328
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 372 LQAIVKETLRIHPPGPLLSWA----RLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
+ A V+E LRI+ LS+A RLA D+ VGD V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 428 EPEKFKPER 436
P + +R
Sbjct: 321 NPGSIELDR 329
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 372 LQAIVKETLRIHPPGPLLSWA----RLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
+ A V+E LRI+ LS+A RLA D+ VGD V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 428 EPEKFKPER 436
P + +R
Sbjct: 321 NPGSIELDR 329
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 372 LQAIVKETLRIHPPGPLLSWA----RLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWA 427
+ A V+E LRI+ LS+A RLA D+ VGD V G +V + DP +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 428 EPEKFKPER 436
P + +R
Sbjct: 321 NPGSIELDR 329
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 23/138 (16%)
Query: 301 EKEAKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRP 360
E +L+ +++A+ ++ G +T L+ + ++ HP+ Q K AE S++ ++
Sbjct: 216 EDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLLAEDPSLISSA-- 272
Query: 361 VQDSDIPSLPYLQAIVKETLRIHPPGPLLSWA--RLAVRDVYVGDNFVPAGTTAMVNMWA 418
V+E LR P +S A R DV +PAG M+ + A
Sbjct: 273 ---------------VEEFLRFDSP---VSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAA 314
Query: 419 ITHDPRVWAEPEKFKPER 436
D EP++ R
Sbjct: 315 ANRDADWMPEPDRLDITR 332
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 392 ARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPER 436
AR+A+ DV V + AG V+ A DP V+ +P++ +R
Sbjct: 297 ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR 341
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 392 ARLAVRDVYVGDNFVPAGTTAMVNMWAITHDPRVWAEPEKFKPER 436
AR+A+ DV V + AG V+ A DP V+ +P++ +R
Sbjct: 297 ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR 341
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 305 KLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQAEIISVVGNSRPVQDS 364
+L+ +++A+ ++ G +T L+ + ++ HP+ Q K AE S++ ++
Sbjct: 220 RLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLLAEDPSLISSA------ 272
Query: 365 DIPSLPYLQAIVKETLRIHPPGPLLSWA--RLAVRDVYVGDNFVPAGTTAMVNMWAITHD 422
V+E LR P +S A R DV +PAG M+ + A D
Sbjct: 273 -----------VEEFLRFDSP---VSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRD 318
Query: 423 PRVWAEPEKFKPER 436
EP++ R
Sbjct: 319 ADWMPEPDRLDITR 332
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 291 GDFVDVLLDLEKE-AKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQA 349
D + +LL E + ++L+ +++A++ +I GTDT L+ + + ++ PE +A
Sbjct: 223 NDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKA 282
Query: 350 E 350
E
Sbjct: 283 E 283
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 291 GDFVDVLLDLEKE-AKLNDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQA 349
D + +LL E + ++L+ +++A++ +I GTDT L+ + + ++ PE +A
Sbjct: 223 NDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKA 282
Query: 350 E 350
E
Sbjct: 283 E 283
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 41/149 (27%)
Query: 306 LNDSDMIAVLWEMIFRGTDTVAILLE---WILA-------RMVLHPEIQSKAQAEIISVV 355
L++ D+I ++ G D A L W LA R++ HPE+ A
Sbjct: 217 LSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPELIPNA-------- 268
Query: 356 GNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVN 415
V E LR + P + RL ++V VGD + G TAM+
Sbjct: 269 --------------------VDELLRFYGPAMV---GRLVTQEVTVGDITMKPGQTAMLW 305
Query: 416 MWAITHDPRVWAEPEKFKPERFIEEDISI 444
+ D + P+ ER +S+
Sbjct: 306 FPIASRDRSAFDSPDNIVIERTPNRHLSL 334
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 41/149 (27%)
Query: 306 LNDSDMIAVLWEMIFRGTDTVAILLE---WILA-------RMVLHPEIQSKAQAEIISVV 355
L++ D+I ++ G D A L W LA R++ HPE+ A
Sbjct: 216 LSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPELIPNA-------- 267
Query: 356 GNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVN 415
V E LR + P + RL ++V VGD + G TAM+
Sbjct: 268 --------------------VDELLRFYGPAMV---GRLVTQEVTVGDITMKPGQTAMLW 304
Query: 416 MWAITHDPRVWAEPEKFKPERFIEEDISI 444
+ D + P+ ER +S+
Sbjct: 305 FPIASRDRSAFDSPDNIVIERTPNRHLSL 333
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 41/149 (27%)
Query: 306 LNDSDMIAVLWEMIFRGTDTVAILLE---WILA-------RMVLHPEIQSKAQAEIISVV 355
L++ D+I ++ G D A L W LA R++ HPE+ A
Sbjct: 216 LSEDDLIGFFTILLLGGIDATARFLSSVFWRLAWDIELRRRLIAHPELIPNA-------- 267
Query: 356 GNSRPVQDSDIPSLPYLQAIVKETLRIHPPGPLLSWARLAVRDVYVGDNFVPAGTTAMVN 415
V E LR + P + RL ++V VGD + G TAM+
Sbjct: 268 --------------------VDELLRFYGPAMV---GRLVTQEVTVGDITMKPGQTAMLW 304
Query: 416 MWAITHDPRVWAEPEKFKPERFIEEDISI 444
+ D + P+ ER +S+
Sbjct: 305 FPIASRDRSAFDSPDNIVIERTPNRHLSL 333
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,536,280
Number of Sequences: 62578
Number of extensions: 540878
Number of successful extensions: 1457
Number of sequences better than 100.0: 130
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1285
Number of HSP's gapped (non-prelim): 157
length of query: 459
length of database: 14,973,337
effective HSP length: 102
effective length of query: 357
effective length of database: 8,590,381
effective search space: 3066766017
effective search space used: 3066766017
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 53 (25.0 bits)