Query         047311
Match_columns 499
No_of_seqs    174 out of 1995
Neff          10.8
Searched_HMMs 46136
Date          Fri Mar 29 09:52:02 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047311.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047311hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 7.1E-81 1.5E-85  602.8  39.1  421   37-491    26-463 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 2.1E-78 4.5E-83  576.1  42.5  439   22-490    16-470 (499)
  3 PLN02290 cytokinin trans-hydro 100.0 1.8E-77 3.8E-82  602.0  47.5  458   22-493    27-492 (516)
  4 PTZ00404 cytochrome P450; Prov 100.0 1.8E-74 3.9E-79  575.8  40.2  422   31-493    23-459 (482)
  5 KOG0157 Cytochrome P450 CYP4/C 100.0 1.2E-74 2.7E-79  571.5  37.9  425   35-494    33-474 (497)
  6 PLN02971 tryptophan N-hydroxyl 100.0   8E-74 1.7E-78  575.9  43.8  422   37-492    57-508 (543)
  7 PLN02183 ferulate 5-hydroxylas 100.0 6.3E-74 1.4E-78  574.7  40.9  428   37-494    36-485 (516)
  8 PLN03234 cytochrome P450 83B1; 100.0   1E-73 2.2E-78  572.9  41.5  426   37-492    28-470 (499)
  9 PLN02500 cytochrome P450 90B1  100.0 2.4E-73 5.1E-78  568.0  39.9  411   37-493    38-469 (490)
 10 PLN02687 flavonoid 3'-monooxyg 100.0 3.4E-73 7.3E-78  569.6  41.2  425   38-493    35-481 (517)
 11 PLN02966 cytochrome P450 83A1  100.0 6.1E-73 1.3E-77  566.2  40.2  427   37-494    29-473 (502)
 12 PLN00110 flavonoid 3',5'-hydro 100.0 9.2E-73   2E-77  563.0  40.4  426   35-493    29-472 (504)
 13 KOG0159 Cytochrome P450 CYP11/ 100.0 1.4E-72   3E-77  523.2  34.8  427   38-497    51-499 (519)
 14 PLN02774 brassinosteroid-6-oxi 100.0 2.5E-72 5.4E-77  556.1  37.8  408   38-494    32-444 (463)
 15 PLN03112 cytochrome P450 famil 100.0 9.5E-72 2.1E-76  560.2  42.5  423   37-492    32-479 (514)
 16 PLN02394 trans-cinnamate 4-mon 100.0   9E-72   2E-76  559.3  42.0  422   37-492    30-474 (503)
 17 PLN00168 Cytochrome P450; Prov 100.0 1.2E-71 2.6E-76  558.6  42.5  428   34-494    32-493 (519)
 18 PLN02169 fatty acid (omega-1)- 100.0 2.5E-71 5.3E-76  551.6  41.8  428   31-493    25-477 (500)
 19 PLN03195 fatty acid omega-hydr 100.0 2.1E-71 4.5E-76  557.6  40.1  423   35-492    28-492 (516)
 20 PF00067 p450:  Cytochrome P450 100.0 1.2E-72 2.7E-77  563.9  30.0  426   39-496     1-445 (463)
 21 PLN02196 abscisic acid 8'-hydr 100.0 5.8E-71 1.3E-75  545.8  39.0  402   37-492    35-440 (463)
 22 PLN02738 carotene beta-ring hy 100.0 2.1E-70 4.5E-75  552.4  41.5  426   27-492   105-570 (633)
 23 PLN02655 ent-kaurene oxidase   100.0   5E-70 1.1E-74  540.1  39.3  416   39-492     1-439 (466)
 24 PLN03018 homomethionine N-hydr 100.0   5E-68 1.1E-72  529.7  43.9  421   38-492    41-498 (534)
 25 PLN03141 3-epi-6-deoxocathaste 100.0   8E-69 1.7E-73  529.9  36.9  408   37-492     7-429 (452)
 26 PLN02302 ent-kaurenoic acid ox 100.0 6.5E-68 1.4E-72  531.2  43.3  409   37-491    42-464 (490)
 27 PLN02987 Cytochrome P450, fami 100.0 2.3E-67   5E-72  518.3  38.1  410   37-494    30-449 (472)
 28 PLN02426 cytochrome P450, fami 100.0 1.5E-66 3.3E-71  516.4  43.8  396   80-491    61-473 (502)
 29 KOG0684 Cytochrome P450 [Secon 100.0 1.4E-67   3E-72  477.5  32.6  415   37-491    31-459 (486)
 30 PLN02936 epsilon-ring hydroxyl 100.0 1.2E-66 2.7E-71  518.1  40.0  418   40-493    15-459 (489)
 31 PLN02648 allene oxide synthase 100.0   2E-60 4.2E-65  465.3  31.2  404   37-494    17-465 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 4.2E-54 9.2E-59  416.0  32.6  356   84-491    27-387 (411)
 33 PF01102 Glycophorin_A:  Glycop  62.5      11 0.00025   29.3   3.6   21    3-23     68-88  (122)
 34 KOG3653 Transforming growth fa  58.0      13 0.00029   36.1   3.9   44   84-128   214-259 (534)
 35 PF12508 DUF3714:  Protein of u  57.3       4 8.8E-05   35.0   0.4   44  371-415    51-94  (200)
 36 PF15330 SIT:  SHP2-interacting  54.3      20 0.00044   27.2   3.7   11   44-54     45-55  (107)
 37 PF12273 RCR:  Chitin synthesis  51.6      15 0.00032   29.3   2.7    7   46-52     33-39  (130)
 38 PHA02902 putative IMV membrane  48.9      39 0.00084   22.5   3.7   25    3-27      3-27  (70)
 39 PF13625 Helicase_C_3:  Helicas  46.8      58  0.0013   25.8   5.5   44   75-120    70-113 (129)
 40 PRK06789 flagellar motor switc  43.2      24 0.00051   24.7   2.3   39  378-416    21-62  (74)
 41 PF08492 SRP72:  SRP72 RNA-bind  42.2      19 0.00041   23.9   1.6    8  435-442    44-51  (59)
 42 PF12554 MOZART1:  Mitotic-spin  41.6      83  0.0018   19.9   4.3   42  313-354     6-47  (48)
 43 PF15300 INT_SG_DDX_CT_C:  INTS  41.2      19 0.00042   24.4   1.6   15  372-386    40-54  (65)
 44 PRK04989 psbM photosystem II r  40.5      71  0.0015   18.5   3.5   25    1-25      1-25  (35)
 45 TIGR03038 PS_II_psbM photosyst  39.8      72  0.0016   18.2   3.4   25    1-25      1-25  (33)
 46 PF05952 ComX:  Bacillus compet  39.7      28 0.00061   22.9   2.1   19  335-353     4-22  (57)
 47 CHL00080 psbM photosystem II p  36.1      86  0.0019   18.0   3.3   25    1-25      1-25  (34)
 48 PF05151 PsbM:  Photosystem II   35.5      85  0.0018   17.7   3.2   23    1-23      1-23  (31)
 49 KOG3506 40S ribosomal protein   34.6      18 0.00039   23.2   0.6   11  454-464    12-22  (56)
 50 PF11138 DUF2911:  Protein of u  33.1      51  0.0011   26.7   3.1   40  397-438    53-99  (145)
 51 PF12444 Sox_N:  Sox developmen  33.0      31 0.00066   24.9   1.6   21  471-491    60-80  (84)
 52 PF05393 Hum_adeno_E3A:  Human   32.9      98  0.0021   22.3   4.0    8   42-49     64-71  (94)
 53 TIGR03779 Bac_Flav_CT_M Bacter  32.9      14  0.0003   35.6  -0.1   45  371-416   254-298 (410)
 54 PRK14094 psbM photosystem II r  32.7      70  0.0015   19.8   2.8   26    1-26      1-26  (50)
 55 PF11395 DUF2873:  Protein of u  30.9 1.1E+02  0.0025   17.7   3.5   25    4-28      9-33  (43)
 56 COG0851 MinE Septum formation   29.0      91   0.002   22.6   3.4   18  343-360    35-52  (88)
 57 COG1707 ACT domain-containing   27.0      71  0.0015   26.2   2.9   39   77-115   152-195 (218)
 58 PF13893 RRM_5:  RNA recognitio  26.4 1.3E+02  0.0029   19.1   3.9   34   86-119     2-39  (56)
 59 PRK00400 hisE phosphoribosyl-A  26.3 2.9E+02  0.0064   21.0   7.3   79  268-358     6-92  (105)
 60 PF09201 SRX:  SRX;  InterPro:   25.4      56  0.0012   25.9   2.0   23  461-483    18-40  (148)
 61 TIGR00847 ccoS cytochrome oxid  24.3 1.5E+02  0.0033   19.0   3.5   27    1-27      1-27  (51)
 62 PF01102 Glycophorin_A:  Glycop  23.5 1.3E+02  0.0028   23.6   3.7   18    9-26     71-88  (122)
 63 PHA01346 hypothetical protein   23.3      64  0.0014   19.4   1.5   19  341-359    27-46  (53)
 64 PF14483 Cut8_M:  Cut8 dimerisa  23.3 1.2E+02  0.0026   18.1   2.7   16  337-352    19-35  (38)
 65 PF11227 DUF3025:  Protein of u  22.9      50  0.0011   28.6   1.5   24  414-438   187-211 (212)
 66 PRK05933 type III secretion sy  22.1      79  0.0017   29.3   2.6   43  374-416   316-362 (372)
 67 COG2101 SPT15 TATA-box binding  22.1      33 0.00071   28.4   0.2   35  433-467    36-70  (185)
 68 PF10264 Stork_head:  Winged he  21.6 2.8E+02   0.006   19.9   4.7   48  332-381    15-64  (80)
 69 PF09926 DUF2158:  Uncharacteri  21.2      82  0.0018   20.4   1.9   17   93-109     4-20  (53)
 70 PHA02681 ORF089 virion membran  20.9   2E+02  0.0043   20.5   3.7   23    1-23      1-23  (92)
 71 COG0140 HisI Phosphoribosyl-AT  20.3 3.7E+02  0.0079   19.9   7.0   25  270-295     4-28  (92)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.1e-81  Score=602.80  Aligned_cols=421  Identities=26%  Similarity=0.446  Sum_probs=356.3

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      +-||||++||+|||++++...                      .+++.+.+|.++|||||++++|..++|||+|+++++|
T Consensus        26 ~lPPGP~~lPiIGnl~~l~~~----------------------~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE   83 (489)
T KOG0156|consen   26 NLPPGPPPLPIIGNLHQLGSL----------------------PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKE   83 (489)
T ss_pred             CCCcCCCCCCccccHHHcCCC----------------------chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHH
Confidence            349999999999999999761                      3778999999999999999999999999999999999


Q ss_pred             HHhcCCCcc-CCCCcccc-ccCCCCcCceeec-cChhHHHHHhhhCCc-CcHHHHHhhHHHHHHHHHHHHHHHHHHHhhc
Q 047311          117 INQCTSLSL-GKPSYLSK-DRGPLLGQGILAS-SGPLWVYQRKVIAPE-LYLERVKGMVKLMVDSTTSIVKSWESRIESE  192 (499)
Q Consensus       117 i~~~~~~~~-~~~~~~~~-~~~~~~g~~l~~~-~g~~w~~~R~~l~~~-~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~  192 (499)
                      ++.+++..+ +||..... ......+.+++.+ +|+.|+++||+.... ++...++.+...-.++++.+++.+.+   ..
T Consensus        84 ~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~---~~  160 (489)
T KOG0156|consen   84 VLVKQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK---SK  160 (489)
T ss_pred             HHHhCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh---cC
Confidence            999888877 66641111 1112245788777 899999999988877 46777888878789999999999887   22


Q ss_pred             CCceEEehHHHHHHHHHHHHHHHhhCCCCCc-hhHhHHHHHHHHHHHhc------cCCCCC-cccccCC--CcchHHHHH
Q 047311          193 GGIAEIRVDRYMQSLAADVISRACFGSNYSK-GQEIFSKFECLVLAMSK------GAVGVP-GLRYLPT--KNNRDIWKL  262 (499)
Q Consensus       193 ~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~-~~~~~~~~~~~~~~~~~------~~~~~p-~l~~l~~--~~~~~~~~~  262 (499)
                      .+ .++|+...+..++.++|++++||.+++. +++.+..+..+......      ...++| ++.+++.  ...+.....
T Consensus       161 ~~-~~vdl~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~  239 (489)
T KOG0156|consen  161 KG-EPVDLSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKV  239 (489)
T ss_pred             CC-ceeeHHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHH
Confidence            44 7999999999999999999999999986 33444445444444433      445677 5666652  244555556


Q ss_pred             HHHHHHHHHHHHHHHhhcC--cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 047311          263 DKEINSMILQVVKERSQSC--SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLL  340 (499)
Q Consensus       263 ~~~l~~~~~~~i~~r~~~~--~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L  340 (499)
                      ..++..++++.|+++++..  +++.|++|.+++..++++...      ++++++...+.++++||+|||++|+.|++.+|
T Consensus       240 ~~~~~~~~~~~i~eh~~~~~~~~~~D~vD~lL~~~~~~~~~~------~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~L  313 (489)
T KOG0156|consen  240 SKRLDEFLERIIDEHREKIGDEEGRDFVDALLKLMKEEKAEG------LTDDHLKALILDLFLAGTDTTATTLEWAMAEL  313 (489)
T ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHhhcccccCC------CCHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence            6669999999999987643  233899999999976544211      78999999999999999999999999999999


Q ss_pred             hcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeeccccccccEEecCCCeEeecccc
Q 047311          341 AVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKFKDIVIPKGMGIQVPIPI  419 (499)
Q Consensus       341 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~G~~v~~~~~~  419 (499)
                      ++||++|+|+++||++++|.+..++.+|+.+||||+|+|+|++|++|++|. ++|.+.+|+.|+||.|||||.|+++.|+
T Consensus       314 l~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~a  393 (489)
T KOG0156|consen  314 LNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWA  393 (489)
T ss_pred             HhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehh
Confidence            999999999999999999987767999999999999999999999999997 7999999999999999999999999999


Q ss_pred             cccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCC
Q 047311          420 LQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPN  491 (499)
Q Consensus       420 ~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~  491 (499)
                      +||||++| +||++|+||||++++.... ....++|||.|+|+|||..||.+++.++++.||++|+|+.+++
T Consensus       394 i~rDp~vw-~dP~eF~PERFl~~~d~~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~  463 (489)
T KOG0156|consen  394 IHRDPKVW-EDPEEFKPERFLDSNDGKG-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG  463 (489)
T ss_pred             hhcCCccC-CCccccChhhhcCCccccC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence            99999999 9999999999999741222 5778999999999999999999999999999999999999977


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.1e-78  Score=576.08  Aligned_cols=439  Identities=29%  Similarity=0.417  Sum_probs=352.4

Q ss_pred             HHHhhHHHHHHHHHhcCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeec
Q 047311           22 ALVLKPKKLRALLQKQGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMG  101 (499)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~  101 (499)
                      +++....+...+|+++++|+|+++|++||+..+.+.                  ..  ........|.++ |++|.++.+
T Consensus        16 l~y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~------------------~~--~~~~~~~~~~~~-~~~~G~y~~   74 (499)
T KOG0158|consen   16 LLYLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKR------------------ER--PGDLLLDIYTKY-RPVVGIYEG   74 (499)
T ss_pred             HHHHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhc------------------cC--cHHHHHHHHhcC-CCEEEEEec
Confidence            344445666778999999999999999999999772                  10  122234445544 999999999


Q ss_pred             CeeEEEecCHHHHHHHHhcCCCcc-CC--CCccccccCCCCcCceeeccChhHHHHHhhhCCcCcHHHHHhhHHHHHHHH
Q 047311          102 SIQIFCTTDVDLVKEINQCTSLSL-GK--PSYLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLERVKGMVKLMVDST  178 (499)
Q Consensus       102 ~~~~vvv~d~~~i~~i~~~~~~~~-~~--~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~~~~i~~~~  178 (499)
                      .+|.++|+|||.|++|+.+....| ++  +....... +....+++...|++||++|..++|.|++.+++++.+.+++.+
T Consensus        75 ~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~-~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~  153 (499)
T KOG0158|consen   75 RQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED-PLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVG  153 (499)
T ss_pred             CCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC-cccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHH
Confidence            999999999999999999777666 52  22222211 344578899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCch----hHhHHHHHHHHHHHhc-------cCCCCCc
Q 047311          179 TSIVKSWESRIESEGGIAEIRVDRYMQSLAADVISRACFGSNYSKG----QEIFSKFECLVLAMSK-------GAVGVPG  247 (499)
Q Consensus       179 ~~l~~~l~~~~~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~p~  247 (499)
                      +++++.+.+...  .+ ..+++.+.+.+++.|||+.++||.+.+.-    .++.............       ....+|.
T Consensus       154 ~~l~~~l~~~~~--~~-~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~  230 (499)
T KOG0158|consen  154 DELVRHLRRKSE--GG-QEGEIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPK  230 (499)
T ss_pred             HHHHHHHHHhhc--cc-CCccHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHH
Confidence            999999988654  22 47899999999999999999999987542    2222222222222111       1112232


Q ss_pred             ccccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHhhCC-CCCCCCCCCCchHHHHHHHHHHHHhhh
Q 047311          248 LRYLPTKNNRDIWKLDKEINSMILQVVKERSQSCSHEKDLLQMILEAAKSCG-YYNGVPLNISRDKFIVDNCKNIYFAGH  326 (499)
Q Consensus       248 l~~l~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~~-~~~~~~~~~l~~~~i~~~~~~~~~aG~  326 (499)
                      +.... .......+..+.+.+.+.+.++.|......++|+++.+++...++. +++..  ..+|.++|+++++.+++||.
T Consensus       231 l~~~l-~~~~~~~~~~~~~~~~v~~~v~~R~~~~~~r~Dfi~lll~~~~~~~~~~~~~--~~lt~dei~aQafvFl~AGf  307 (499)
T KOG0158|consen  231 LALPL-RVKLFPEDVTDFFRKLVNSRVEQREKENIERNDFIDLLLDARASDFAKSKSH--KALTDDEIAAQAFVFLLAGF  307 (499)
T ss_pred             HHHhh-hcccChHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHhhcccccccccc--cccCHHHHHHHHHHHHHhhh
Confidence            22110 1112234455667777788888886655678999999999985411 11111  13999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccc-cE
Q 047311          327 ETSAVTSSWALMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFK-DI  405 (499)
Q Consensus       327 ~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~-g~  405 (499)
                      ||||+++++++|+|++|||+|+|||+||++++.+...+++|.+.+|+||++||+||||+||+++.+.|.+++|+++. ++
T Consensus       308 eTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~  387 (499)
T KOG0158|consen  308 ETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGF  387 (499)
T ss_pred             HhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCe
Confidence            99999999999999999999999999999998655447999999999999999999999999999999999999999 99


Q ss_pred             EecCCCeEeecccccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcce
Q 047311          406 VIPKGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFS  485 (499)
Q Consensus       406 ~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~  485 (499)
                      .||||+.|.++.+++||||++| |||++|+||||.+.... ..++..|+|||.|||+|+|++||++|+|++|++||++|+
T Consensus       388 ~i~kG~~V~Ip~~alH~Dp~~~-p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~  465 (499)
T KOG0158|consen  388 VIPKGTPVMIPTYALHHDPEYW-PEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFS  465 (499)
T ss_pred             EeCCCCEEEeecccccCCcccC-CCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCE
Confidence            9999999999999999999999 99999999999987433 567889999999999999999999999999999999999


Q ss_pred             EEeCC
Q 047311          486 FSLSP  490 (499)
Q Consensus       486 i~~~~  490 (499)
                      ++..+
T Consensus       466 ~~~~~  470 (499)
T KOG0158|consen  466 FEVCP  470 (499)
T ss_pred             EecCC
Confidence            99988


No 3  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.8e-77  Score=602.02  Aligned_cols=458  Identities=37%  Similarity=0.686  Sum_probs=366.4

Q ss_pred             HHHhhHHHHHHHHHhcCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeec
Q 047311           22 ALVLKPKKLRALLQKQGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMG  101 (499)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~  101 (499)
                      .++..+.+.+.++++++||||+++|++||++++.....+....    .+-..++.+.+.....+.+|+++||++|++++|
T Consensus        27 ~~~~~~~~~~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g  102 (516)
T PLN02290         27 CYFLTPRRIKKIMERQGVRGPKPRPLTGNILDVSALVSQSTSK----DMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNG  102 (516)
T ss_pred             HHhccHHHHHHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcC----CCCCCCcccccccchHHHHHHHHhCCeEEEccC
Confidence            3456678889999999999999999999999886421111100    000011222234445678999999999999999


Q ss_pred             CeeEEEecCHHHHHHHHhcCCCccCCCCccccccCCCCcCceeeccChhHHHHHhhhCCcCcHHHHHhhHHHHHHHHHHH
Q 047311          102 SIQIFCTTDVDLVKEINQCTSLSLGKPSYLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLERVKGMVKLMVDSTTSI  181 (499)
Q Consensus       102 ~~~~vvv~d~~~i~~i~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~~~~i~~~~~~l  181 (499)
                      +.++++++||+++++++.++...+.++...........|.++++++|+.|+++|+++.+.|+..+++.+.+.+.++++++
T Consensus       103 ~~~~vvv~dp~~v~~il~~~~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l  182 (516)
T PLN02290        103 TEPRLCLTETELIKELLTKYNTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQM  182 (516)
T ss_pred             CccEEEECCHHHHHHHHhcCCCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999976544555432211122335678888999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCchhHhHHHHHHHHHHHhc--cCCCCCcccccCCCcchHH
Q 047311          182 VKSWESRIESEGGIAEIRVDRYMQSLAADVISRACFGSNYSKGQEIFSKFECLVLAMSK--GAVGVPGLRYLPTKNNRDI  259 (499)
Q Consensus       182 ~~~l~~~~~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~l~~~~~~~~  259 (499)
                      ++.|.+...  .+..++|+.+.+..+++|+++.++||.+++..++....+..+......  ....+|.+.++|....+..
T Consensus       183 ~~~l~~~~~--~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~  260 (516)
T PLN02290        183 LQSLQKAVE--SGQTEVEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREI  260 (516)
T ss_pred             HHHHHHHHh--cCCceEEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHH
Confidence            999976543  222589999999999999999999999987655555554444433222  1123455556665444556


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC------cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHH
Q 047311          260 WKLDKEINSMILQVVKERSQSC------SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTS  333 (499)
Q Consensus       260 ~~~~~~l~~~~~~~i~~r~~~~------~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l  333 (499)
                      ....+.+.+++.+.++++++..      ....|+++.+++...+...+.    ..++++++.+++..+++||+|||++++
T Consensus       261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~----~~l~~~~i~~~~~~~~~AG~dTta~tl  336 (516)
T PLN02290        261 KSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNG----FNLNLQLIMDECKTFFFAGHETTALLL  336 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCC----CCCCHHHHHHHHHHHHhhhHHHHHHHH
Confidence            6677788888888888876532      124689999997643221111    127899999999999999999999999


Q ss_pred             HHHHHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeE
Q 047311          334 SWALMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGI  413 (499)
Q Consensus       334 ~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v  413 (499)
                      +|++++|++||++|+|+++||+++++++ .++++++++||||+|||+||||++|+++.++|.+.+|++++||.|||||.|
T Consensus       337 ~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V  415 (516)
T PLN02290        337 TWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSI  415 (516)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEE
Confidence            9999999999999999999999999876 559999999999999999999999999989999999999999999999999


Q ss_pred             eecccccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCC
Q 047311          414 QVPIPILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQ  493 (499)
Q Consensus       414 ~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~  493 (499)
                      .++.+++||||++||+||++|+||||++..   ......++|||.|+|.|+|++||++|+++++++|+++|+|++.++.+
T Consensus       416 ~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~---~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~  492 (516)
T PLN02290        416 WIPVLAIHHSEELWGKDANEFNPDRFAGRP---FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR  492 (516)
T ss_pred             EecHHHhcCChhhhCCChhhcCccccCCCC---CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc
Confidence            999999999999997799999999999542   12345799999999999999999999999999999999999987754


No 4  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.8e-74  Score=575.76  Aligned_cols=422  Identities=23%  Similarity=0.350  Sum_probs=338.3

Q ss_pred             HHHHHhcCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecC
Q 047311           31 RALLQKQGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTD  110 (499)
Q Consensus        31 ~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d  110 (499)
                      ..+.+++.+|||+++|++||++.+..                       +++.++.+|+++||++|++++|+.++++++|
T Consensus        23 ~~~~~~~~~pgp~~~p~~G~~~~~~~-----------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~   79 (482)
T PTZ00404         23 YKKIHKNELKGPIPIPILGNLHQLGN-----------------------LPHRDLTKMSKKYGGIFRIWFADLYTVVLSD   79 (482)
T ss_pred             hhhccCCCCCCCCCCCeeccHhhhcc-----------------------cHHHHHHHHHHHhCCeeEEEecCCCEEEECC
Confidence            33567788999999999999987754                       5667899999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCccC-CCCccccccCCCCcCceeeccChhHHHHHhhhCCcCcHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 047311          111 VDLVKEINQCTSLSLG-KPSYLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLERVKGMVKLMVDSTTSIVKSWESRI  189 (499)
Q Consensus       111 ~~~i~~i~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~  189 (499)
                      |+++++++.++...+. ++.. ........+.++++.+|+.|+++|+++.+.|+.+.++.+.+.+.+.++.+++.|.+..
T Consensus        80 p~~~~~il~~~~~~~~~r~~~-~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~  158 (482)
T PTZ00404         80 PILIREMFVDNFDNFSDRPKI-PSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIE  158 (482)
T ss_pred             HHHHHHHHHhcchhhcCCCCc-ceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHH
Confidence            9999999986654453 3322 1111223478899999999999999999999999999999999999999999997643


Q ss_pred             hhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCch--------hHhHHHHHHHHHHHhcc--CCCCCcccccCCCcchHH
Q 047311          190 ESEGGIAEIRVDRYMQSLAADVISRACFGSNYSKG--------QEIFSKFECLVLAMSKG--AVGVPGLRYLPTKNNRDI  259 (499)
Q Consensus       190 ~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~p~l~~l~~~~~~~~  259 (499)
                      .  .+ .++|+.+++.++++|+++.++||.++...        ..+...+..+.......  ...++++..+........
T Consensus       159 ~--~~-~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (482)
T PTZ00404        159 S--SG-ETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHT  235 (482)
T ss_pred             h--cC-CccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHH
Confidence            2  33 57999999999999999999999987532        12333333333322211  111111111100111223


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC--cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 047311          260 WKLDKEINSMILQVVKERSQSC--SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWAL  337 (499)
Q Consensus       260 ~~~~~~l~~~~~~~i~~r~~~~--~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l  337 (499)
                      .++.+.+.+++.+.++++++..  +...|+++.+++...+..        ..+.+++++++..+++||+|||+.+++|++
T Consensus       236 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~dll~~ll~~~~~~~--------~~~~~~i~~~~~~~~~AG~dTta~~l~~~l  307 (482)
T PTZ00404        236 DKNFKKIKKFIKEKYHEHLKTIDPEVPRDLLDLLIKEYGTNT--------DDDILSILATILDFFLAGVDTSATSLEWMV  307 (482)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCCCcccHHHHHHHHhccCC--------cccHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence            3456667777777777665532  235699999998743211        023445889999999999999999999999


Q ss_pred             HHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeecccccc-ccEEecCCCeEee
Q 047311          338 MLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKF-KDIVIPKGMGIQV  415 (499)
Q Consensus       338 ~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i-~g~~ip~G~~v~~  415 (499)
                      ++|++||++|+||++|++++++++..++++++.+|||++|||+|+||++|++|. ++|.+.+|+++ +||.|||||.|.+
T Consensus       308 ~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~  387 (482)
T PTZ00404        308 LMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILI  387 (482)
T ss_pred             HHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEe
Confidence            999999999999999999999865566999999999999999999999999997 79999999999 9999999999999


Q ss_pred             cccccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCC
Q 047311          416 PIPILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQ  493 (499)
Q Consensus       416 ~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~  493 (499)
                      +.+++||||++| |||++|+||||++.     ..+..++|||.|+|.|+|+++|++|+++++++|+++|+|+++++.+
T Consensus       388 ~~~a~hrdp~~~-~dP~~F~PeRwl~~-----~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  459 (482)
T PTZ00404        388 NYYSLGRNEKYF-ENPEQFDPSRFLNP-----DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK  459 (482)
T ss_pred             eHHHhhCCcccc-CCccccCccccCCC-----CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC
Confidence            999999999999 99999999999864     2456899999999999999999999999999999999999876643


No 5  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.2e-74  Score=571.45  Aligned_cols=425  Identities=31%  Similarity=0.540  Sum_probs=353.1

Q ss_pred             HhcCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHH
Q 047311           35 QKQGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLV  114 (499)
Q Consensus        35 ~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i  114 (499)
                      +.+.+|||++||++|+++++.+.                 +   .++..++.++..+||++|+.|+|+.++++++||+.+
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~-----------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~   92 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKP-----------------L---EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELI   92 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcc-----------------h---hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHH
Confidence            45569999999999999999761                 1   266778999999999999999999999999999999


Q ss_pred             HHHHhcCCCccCCCCccccccCCCCcCceeeccChhHHHHHhhhCCcCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 047311          115 KEINQCTSLSLGKPSYLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLERVKGMVKLMVDSTTSIVKSWESRIESEGG  194 (499)
Q Consensus       115 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  194 (499)
                      ++|+.++.....++..+...+..+.|.|+++++|+.|+.+||+++++|+.+.++.+...+.+.+..++..+.....   +
T Consensus        93 ~~Il~~~~~~~~k~~~~~~~~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~---~  169 (497)
T KOG0157|consen   93 EEILKSSNENYPKGPDYPESLKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAAS---G  169 (497)
T ss_pred             HHHHhcCcccCCCchhHHHHHHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc---C
Confidence            9999755555666555665677788999999999999999999999999999999999999999888888776422   2


Q ss_pred             ceEEehHHHHHHHHHHHHHHHhhCCCC-C----chhHhHHHHHHHHHHHhccCCCCC-cccccCCC-cchHHHHHHHHHH
Q 047311          195 IAEIRVDRYMQSLAADVISRACFGSNY-S----KGQEIFSKFECLVLAMSKGAVGVP-GLRYLPTK-NNRDIWKLDKEIN  267 (499)
Q Consensus       195 ~~~~dl~~~~~~~~~~vi~~~~fG~~~-~----~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~-~~~~~~~~~~~l~  267 (499)
                       ..+|+.+.+.++++|+++.++||... +    ...++..++......+.. ....| ...++... ..++..++.+.+.
T Consensus       170 -~~vd~~~~~~~~tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~a~~~~~  247 (497)
T KOG0157|consen  170 -EEVDLQDLLKRLTLDIICKTAMGPESLDAEGPELFEYVQAFDDLTELISK-RINLPLGTKFLYGLKSERKLKKARKILH  247 (497)
T ss_pred             -CeEcHHHHHHHHHHHHHHHHhcCCccccccCCcccHHHHHHHHHHHHHHH-HHcCchhhhHHhhcchHHHHHHHHHHHH
Confidence             34999999999999999999999322 1    123455555554444432 23334 33333322 5778889999999


Q ss_pred             HHHHHHHHHHhhcC--------cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 047311          268 SMILQVVKERSQSC--------SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALML  339 (499)
Q Consensus       268 ~~~~~~i~~r~~~~--------~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~  339 (499)
                      +++++.|++|++..        ....|+++.+....+ ..         ++++++++++.++++||+|||+++++|+++.
T Consensus       248 ~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~-~~---------l~~~~i~d~v~tf~faG~DTTss~ltw~l~~  317 (497)
T KOG0157|consen  248 DFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLEED-KP---------LTDEDIRDEVDTFMFAGHDTTSSALTWTLWL  317 (497)
T ss_pred             HHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHhcc-CC---------CCHHHHHHHHHHheeeccchHHHHHHHHHHH
Confidence            99999999888642        234677776322222 22         8999999999999999999999999999999


Q ss_pred             HhcChHHHHHHHHHHHHHhccCCC-CChhhhhcChhHHHHHHhhhcCCCCCcccceeecccccc-ccEEecCCCeEeecc
Q 047311          340 LAVYPEWQDRVRAEVLRVCKDRCL-LDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKF-KDIVIPKGMGIQVPI  417 (499)
Q Consensus       340 L~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~  417 (499)
                      |+.||++|+|+++|++++++++.. .+..+.++|+||++||+||||||||+|.+.|.+.+|+++ +||.||||+.|.+++
T Consensus       318 La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~  397 (497)
T KOG0157|consen  318 LAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISI  397 (497)
T ss_pred             HhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEeh
Confidence            999999999999999999985433 233333369999999999999999999999999999999 589999999999999


Q ss_pred             cccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCCc
Q 047311          418 PILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQH  494 (499)
Q Consensus       418 ~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~~  494 (499)
                      +++|||+.+||+||++|+||||+++.....+++.+|+|||+|+|.|+|+.||++|+|+++++++++|+|++..+..+
T Consensus       398 ~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~  474 (497)
T KOG0157|consen  398 YALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKP  474 (497)
T ss_pred             HHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCc
Confidence            99999999997799999999999864444566889999999999999999999999999999999999998877643


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=8e-74  Score=575.85  Aligned_cols=422  Identities=19%  Similarity=0.292  Sum_probs=333.6

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhC-CceEEeecCeeEEEecCHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYG-SRYIYSMGSIQIFCTTDVDLVK  115 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~vvv~d~~~i~  115 (499)
                      +.||||+++|++||++++...                     ...+.++.+|.++|| +||++++|+.++++|+||+.++
T Consensus        57 ~lPPGP~~lPiiGnl~~l~~~---------------------~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ik  115 (543)
T PLN02971         57 PLPPGPTGFPIVGMIPAMLKN---------------------RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAR  115 (543)
T ss_pred             CCCcCCCCCCcccchHHhccC---------------------CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHH
Confidence            458999999999999887530                     023567899999999 7999999999999999999999


Q ss_pred             HHHhcCCCcc-CCCCccccccCCCCcC----ceeeccChhHHHHHhhhCCc-CcHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 047311          116 EINQCTSLSL-GKPSYLSKDRGPLLGQ----GILASSGPLWVYQRKVIAPE-LYLERVKGMVKLMVDSTTSIVKSWESRI  189 (499)
Q Consensus       116 ~i~~~~~~~~-~~~~~~~~~~~~~~g~----~l~~~~g~~w~~~R~~l~~~-~~~~~l~~~~~~i~~~~~~l~~~l~~~~  189 (499)
                      +++.+++..| .++....   ....+.    +++..+|+.|+++|+++.+. ++...++.+.+.++++++.+++.+.+..
T Consensus       116 evl~~~~~~f~~rp~~~~---~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~  192 (543)
T PLN02971        116 EIFKQQDALFASRPLTYA---QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMV  192 (543)
T ss_pred             HHHHhcchhhcCCCcccc---hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999877666 4432111   111222    47778899999999999755 5566677788888888888887776543


Q ss_pred             hhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCc------hh---HhHHHHHHHHHHHhc-----cCCCCCcccccCC-C
Q 047311          190 ESEGGIAEIRVDRYMQSLAADVISRACFGSNYSK------GQ---EIFSKFECLVLAMSK-----GAVGVPGLRYLPT-K  254 (499)
Q Consensus       190 ~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~------~~---~~~~~~~~~~~~~~~-----~~~~~p~l~~l~~-~  254 (499)
                      .  .+ .++|+.+.+.+++++++++++||.++..      ++   +....+..+......     ....+|.+.+++. .
T Consensus       193 ~--~~-~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~  269 (543)
T PLN02971        193 K--NS-EPVDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNG  269 (543)
T ss_pred             c--CC-CceehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccc
Confidence            2  23 5799999999999999999999997621      11   223334443332211     1133455544432 1


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhc---C--cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhH
Q 047311          255 NNRDIWKLDKEINSMILQVVKERSQS---C--SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETS  329 (499)
Q Consensus       255 ~~~~~~~~~~~l~~~~~~~i~~r~~~---~--~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt  329 (499)
                      ..+....+.+.+.+++.+.++++++.   .  ....|+++.+++..++++.      ..++++++.+++.++++||+|||
T Consensus       270 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~ls~~~i~~~~~~l~~AG~dTT  343 (543)
T PLN02971        270 HEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEAGQ------PLLTADEIKPTIKELVMAAPDNP  343 (543)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhcccCC------CCCCHHHHHHhHHHHheeccchH
Confidence            22334445667788888888877542   1  1246999999986432211      01889999999999999999999


Q ss_pred             HHHHHHHHHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeeccccccccEEec
Q 047311          330 AVTSSWALMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKFKDIVIP  408 (499)
Q Consensus       330 ~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip  408 (499)
                      +++++|++++|+.||++|+|+++||+++++++..++++++.+|||++|||+|+||++|++|. ++|.+.+|++++||.||
T Consensus       344 a~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~Ip  423 (543)
T PLN02971        344 SNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIP  423 (543)
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEEC
Confidence            99999999999999999999999999999876667999999999999999999999999997 78999999999999999


Q ss_pred             CCCeEeecccccccCCCCcCCCCCCCCCCCCCCCccC--CCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceE
Q 047311          409 KGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVTA--ACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSF  486 (499)
Q Consensus       409 ~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i  486 (499)
                      |||.|+++.+++||||++| +||++|+||||+++...  ...++..++|||.|+|.|+|++||+.|+++++++||++|+|
T Consensus       424 kGt~v~~~~~~~~~d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~  502 (543)
T PLN02971        424 KGSQVLLSRYGLGRNPKVW-SDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKW  502 (543)
T ss_pred             CCCEEEECcHHhcCChhhC-CCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEE
Confidence            9999999999999999999 99999999999975221  11245679999999999999999999999999999999999


Q ss_pred             EeCCCC
Q 047311          487 SLSPNY  492 (499)
Q Consensus       487 ~~~~~~  492 (499)
                      ++.++.
T Consensus       503 ~~~~~~  508 (543)
T PLN02971        503 KLAGSE  508 (543)
T ss_pred             EeCCCC
Confidence            987754


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=6.3e-74  Score=574.74  Aligned_cols=428  Identities=22%  Similarity=0.356  Sum_probs=338.5

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      +.||||+++|++||++.+..                       ..+.++.+|+++||++|++++|+.++++++||+++++
T Consensus        36 ~~ppgp~~~Pl~G~l~~~~~-----------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~   92 (516)
T PLN02183         36 PYPPGPKGLPIIGNMLMMDQ-----------------------LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQ   92 (516)
T ss_pred             CCCcCCCCCCeeccHHhcCC-----------------------cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHH
Confidence            34999999999999977643                       3345799999999999999999999999999999999


Q ss_pred             HHhcCCCccC-CCCccc-cccCCCCcCceeeccChhHHHHHhh-hCCcCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhcC
Q 047311          117 INQCTSLSLG-KPSYLS-KDRGPLLGQGILASSGPLWVYQRKV-IAPELYLERVKGMVKLMVDSTTSIVKSWESRIESEG  193 (499)
Q Consensus       117 i~~~~~~~~~-~~~~~~-~~~~~~~g~~l~~~~g~~w~~~R~~-l~~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~  193 (499)
                      ++.+++..+. ++.... .......+.+++..+|+.|+++|++ +.+.|+.+.++.+.+. .++++.+++.|...    .
T Consensus        93 il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~----~  167 (516)
T PLN02183         93 VLQVQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN----I  167 (516)
T ss_pred             HHHhhhhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc----C
Confidence            9997666553 332111 1111112456778899999999998 5789999999988875 46788899888542    2


Q ss_pred             CceEEehHHHHHHHHHHHHHHHhhCCCCCch-hHhHHHHHHHHHHHhc--cCCCCCcccccC-CCcchHHHHHHHHHHHH
Q 047311          194 GIAEIRVDRYMQSLAADVISRACFGSNYSKG-QEIFSKFECLVLAMSK--GAVGVPGLRYLP-TKNNRDIWKLDKEINSM  269 (499)
Q Consensus       194 ~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~--~~~~~p~l~~l~-~~~~~~~~~~~~~l~~~  269 (499)
                      + +++|+.+++..+++|+++.++||.+.+.. +++.+.+..+......  ....+|++.+++ ....++..+..+.+.++
T Consensus       168 ~-~~v~~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  246 (516)
T PLN02183        168 G-KPVNIGELIFTLTRNITYRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGF  246 (516)
T ss_pred             C-CcEeHHHHHHHHHHHHHHhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHH
Confidence            3 68999999999999999999999987653 3344444443333221  223456555542 22344566677778888


Q ss_pred             HHHHHHHHhhcC----------cchhHHHHHHHHHHhhCCCCC----CCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHH
Q 047311          270 ILQVVKERSQSC----------SHEKDLLQMILEAAKSCGYYN----GVPLNISRDKFIVDNCKNIYFAGHETSAVTSSW  335 (499)
Q Consensus       270 ~~~~i~~r~~~~----------~~~~d~l~~ll~~~~~~~~~~----~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~  335 (499)
                      +.+.++++.+..          ....|+++.+++...++....    ......++++++.+++.++++||+|||+.+++|
T Consensus       247 ~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~  326 (516)
T PLN02183        247 IDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEW  326 (516)
T ss_pred             HHHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHH
Confidence            877777654321          123589999998654321000    000113889999999999999999999999999


Q ss_pred             HHHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEee
Q 047311          336 ALMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQV  415 (499)
Q Consensus       336 ~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~  415 (499)
                      ++|+|++||++|+|+++|++++++.+..++++++.+||||+|||+|+||++|++|+..|.+.+|++++||.|||||.|.+
T Consensus       327 ~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~  406 (516)
T PLN02183        327 AMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMI  406 (516)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEE
Confidence            99999999999999999999999865567999999999999999999999999999889999999999999999999999


Q ss_pred             cccccccCCCCcCCCCCCCCCCCCCCCccCC-CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCCc
Q 047311          416 PIPILQQNPEAWGSDAHEFNPERFANGVTAA-CKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQH  494 (499)
Q Consensus       416 ~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~~  494 (499)
                      +.+++||||++| +||++|+||||+++++.. ..+...++|||.|+|+|+|++||++|+++++|+|+++|++++.++..+
T Consensus       407 ~~~~~hrd~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~  485 (516)
T PLN02183        407 NAWAIGRDKNSW-EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKP  485 (516)
T ss_pred             ehhhhcCCcccc-CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCC
Confidence            999999999999 999999999999753211 124568999999999999999999999999999999999999887543


No 8  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1e-73  Score=572.87  Aligned_cols=426  Identities=20%  Similarity=0.329  Sum_probs=340.0

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      +.||||+++|++||++.+..                      .++..++.+|+++||++|++++|+.++++++|||++++
T Consensus        28 ~~pPgp~~~P~iG~~~~~~~----------------------~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~   85 (499)
T PLN03234         28 RLPPGPKGLPIIGNLHQMEK----------------------FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKE   85 (499)
T ss_pred             CCCcCCCCCCeeccHHhcCC----------------------CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHH
Confidence            45999999999999987743                      14566899999999999999999999999999999999


Q ss_pred             HHhcCCCccCC-CCccccccCCCCcCce-eeccChhHHHHHhhh-CCcCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhcC
Q 047311          117 INQCTSLSLGK-PSYLSKDRGPLLGQGI-LASSGPLWVYQRKVI-APELYLERVKGMVKLMVDSTTSIVKSWESRIESEG  193 (499)
Q Consensus       117 i~~~~~~~~~~-~~~~~~~~~~~~g~~l-~~~~g~~w~~~R~~l-~~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~  193 (499)
                      ++.+++..+.+ +...........+..+ +...++.|+++|+.+ .+.|+++.++.+.+.+++.++++++.|.+...  +
T Consensus        86 il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~--~  163 (499)
T PLN03234         86 LLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAAD--Q  163 (499)
T ss_pred             HHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhcc--C
Confidence            99977666643 3211111111123333 234578999999974 68999999999999999999999999976533  2


Q ss_pred             CceEEehHHHHHHHHHHHHHHHhhCCCCCchhH----hHHHHHHHHHHHhc--cCCCCCcccccCC--CcchHHHHHHHH
Q 047311          194 GIAEIRVDRYMQSLAADVISRACFGSNYSKGQE----IFSKFECLVLAMSK--GAVGVPGLRYLPT--KNNRDIWKLDKE  265 (499)
Q Consensus       194 ~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~~~----~~~~~~~~~~~~~~--~~~~~p~l~~l~~--~~~~~~~~~~~~  265 (499)
                      + +++|+.+.+..+++|+++.++||.+++..++    +.+.+.+.......  ....+|++.+++.  ...++..++.+.
T Consensus       164 ~-~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~  242 (499)
T PLN03234        164 S-GTVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKE  242 (499)
T ss_pred             C-CeEEHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHH
Confidence            3 6899999999999999999999998864322    22222222211111  1122344433321  123466778889


Q ss_pred             HHHHHHHHHHHHhhcC---cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhc
Q 047311          266 INSMILQVVKERSQSC---SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAV  342 (499)
Q Consensus       266 l~~~~~~~i~~r~~~~---~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~  342 (499)
                      +.+++.+.++++.+..   ...+|+++.+++..++++..     ..++++++.+++.++++||+|||+++++|++|+|++
T Consensus       243 ~~~~~~~~i~~~~~~~~~~~~~~d~l~~l~~~~~~~~~~-----~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~  317 (499)
T PLN03234        243 LDTYLQELLDETLDPNRPKQETESFIDLLMQIYKDQPFS-----IKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIK  317 (499)
T ss_pred             HHHHHHHHHHHHHhhcccCCCcccHHHHHHHHhhccCcC-----CCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHh
Confidence            9999999998875432   23568999988765332211     128899999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeeccccccccEEecCCCeEeecccccc
Q 047311          343 YPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKFKDIVIPKGMGIQVPIPILQ  421 (499)
Q Consensus       343 ~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~  421 (499)
                      ||++|+|+++|++++++++..++++++++|||++|||+|+||++|+++. +.|.+.+|++++||.|||||.|.++.+++|
T Consensus       318 ~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~  397 (499)
T PLN03234        318 YPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVS  397 (499)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhh
Confidence            9999999999999999876667999999999999999999999999997 479999999999999999999999999999


Q ss_pred             cCCCCcCCCCCCCCCCCCCCCccCC--CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCC
Q 047311          422 QNPEAWGSDAHEFNPERFANGVTAA--CKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNY  492 (499)
Q Consensus       422 ~d~~~~g~~p~~F~P~R~~~~~~~~--~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~  492 (499)
                      |||++||+||++|+||||+++.+..  ...+..++|||+|+|+|+|+++|++|+++++|+|+++|+|+++++.
T Consensus       398 rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  470 (499)
T PLN03234        398 RDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGI  470 (499)
T ss_pred             CCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCC
Confidence            9999998899999999999753321  1235679999999999999999999999999999999999998764


No 9  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.4e-73  Score=567.95  Aligned_cols=411  Identities=22%  Similarity=0.329  Sum_probs=328.2

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      +.||||+++|++||++.+...               ..+   +.+++++.+++++||++|++++|+.++|+++||+++++
T Consensus        38 ~~PPgp~~~PiiGn~~~~~~~---------------~~~---~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~   99 (490)
T PLN02500         38 NLPPGNMGWPFLGETIGYLKP---------------YSA---TSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRF   99 (490)
T ss_pred             CCCCCCcCCCchhhHHHHHhh---------------ccc---CChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHH
Confidence            458899999999998765430               001   25667899999999999999999999999999999999


Q ss_pred             HHhcCCCccCCCCccccccCCCCc-CceeeccChhHHHHHhhhCCcCcHHHHHh-hHHHHHHHHHHHHHHHHHHHhhcCC
Q 047311          117 INQCTSLSLGKPSYLSKDRGPLLG-QGILASSGPLWVYQRKVIAPELYLERVKG-MVKLMVDSTTSIVKSWESRIESEGG  194 (499)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~g~~w~~~R~~l~~~~~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~  194 (499)
                      ++.+++..+.... .. ......| .++++.+|+.|+++|+++.+.|+..+++. +.+.+.+.+..+++.|.+      +
T Consensus       100 vl~~~~~~f~~~~-~~-~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~------~  171 (490)
T PLN02500        100 ILQNEGRLFECSY-PR-SIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKE------N  171 (490)
T ss_pred             HHhCCCCeEEeeC-ch-HHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC------C
Confidence            9997766553211 11 1111223 46888899999999999999999988887 567777777777776632      2


Q ss_pred             ceEEehHHHHHHHHHHHHHHHhhCCCCCch--hHhHHHHHHHHHHHhccCCCCCcccccCCCcchHHHHHHHHHHHHHHH
Q 047311          195 IAEIRVDRYMQSLAADVISRACFGSNYSKG--QEIFSKFECLVLAMSKGAVGVPGLRYLPTKNNRDIWKLDKEINSMILQ  272 (499)
Q Consensus       195 ~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~l~~~~~~  272 (499)
                       .++|+.+.+..+++|++++++||.+.+..  +.+...+..+......    .|.  .+|....++..++.+.+.+++.+
T Consensus       172 -~~vd~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~p~~~~~~~~~~~~~~~~~~~~  244 (490)
T PLN02500        172 -STFSAQDEAKKFTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS----APL--NFPGTAYRKALKSRATILKFIER  244 (490)
T ss_pred             -CCEEehHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc----chh--cCCCcccHHHHHHHHHHHHHHHH
Confidence             46899999999999999999999876432  2222223333222111    111  23333345566677888888888


Q ss_pred             HHHHHhhcC------cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHH
Q 047311          273 VVKERSQSC------SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAVYPEW  346 (499)
Q Consensus       273 ~i~~r~~~~------~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~  346 (499)
                      .++++++..      ....|+++.+++..   .         ++++++++++.++++||+|||+++++|++++|++||++
T Consensus       245 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~---~---------ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pev  312 (490)
T PLN02500        245 KMEERIEKLKEEDESVEEDDLLGWVLKHS---N---------LSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKA  312 (490)
T ss_pred             HHHHHHHhhhcccCCCCcchHHHHHHhcc---C---------CCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHH
Confidence            888776431      12468999988741   1         88999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhc-----cCCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEeecccccc
Q 047311          347 QDRVRAEVLRVCK-----DRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQVPIPILQ  421 (499)
Q Consensus       347 ~~~l~~Ei~~~~~-----~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~  421 (499)
                      |+|+++|++++++     ++..++++++.+|||++|||+|+||++|++|.++|.+.+|++++||.|||||.|.++.+++|
T Consensus       313 q~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~h  392 (490)
T PLN02500        313 VQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVH  392 (490)
T ss_pred             HHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcc
Confidence            9999999999873     23346999999999999999999999999998889999999999999999999999999999


Q ss_pred             cCCCCcCCCCCCCCCCCCCCCccCCC------CCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCC
Q 047311          422 QNPEAWGSDAHEFNPERFANGVTAAC------KFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQ  493 (499)
Q Consensus       422 ~d~~~~g~~p~~F~P~R~~~~~~~~~------~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~  493 (499)
                      |||++| +||++|+||||+++.....      .++..++|||.|+|.|+|+++|++|+++++++|+++|+|++.++..
T Consensus       393 rdp~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~  469 (490)
T PLN02500        393 LDSSLY-DQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ  469 (490)
T ss_pred             cCcccC-CCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc
Confidence            999999 9999999999997532111      2356899999999999999999999999999999999999877644


No 10 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.4e-73  Score=569.62  Aligned_cols=425  Identities=22%  Similarity=0.340  Sum_probs=343.4

Q ss_pred             CCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHHH
Q 047311           38 GVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKEI  117 (499)
Q Consensus        38 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~i  117 (499)
                      .||||+++|++||++.+..                       ++++++.+|+++||++|++++|+.++++++||++++++
T Consensus        35 ~pPgp~~~P~iG~~~~~~~-----------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~i   91 (517)
T PLN02687         35 LPPGPRGWPVLGNLPQLGP-----------------------KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQF   91 (517)
T ss_pred             CCccCCCCCccccHHhcCC-----------------------chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHH
Confidence            4889999999999987754                       56778999999999999999999999999999999999


Q ss_pred             HhcCCCccCCCCccc--cccCCCCcCceeeccChhHHHHHhhhC-CcCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 047311          118 NQCTSLSLGKPSYLS--KDRGPLLGQGILASSGPLWVYQRKVIA-PELYLERVKGMVKLMVDSTTSIVKSWESRIESEGG  194 (499)
Q Consensus       118 ~~~~~~~~~~~~~~~--~~~~~~~g~~l~~~~g~~w~~~R~~l~-~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  194 (499)
                      +.++...|.+.....  ..+....+.+++..+|+.|+++|+++. +.|+.+.++.+.+.++++++++++.|.+..   ++
T Consensus        92 l~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~---~~  168 (517)
T PLN02687         92 LRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH---GT  168 (517)
T ss_pred             HHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc---CC
Confidence            997666664322111  111111234456678999999999998 899999999999999999999999997642   23


Q ss_pred             ceEEehHHHHHHHHHHHHHHHhhCCCCCc---h---hHhHHHHHHHHHHHhc--cCCCCCcccccCCC-cchHHHHHHHH
Q 047311          195 IAEIRVDRYMQSLAADVISRACFGSNYSK---G---QEIFSKFECLVLAMSK--GAVGVPGLRYLPTK-NNRDIWKLDKE  265 (499)
Q Consensus       195 ~~~~dl~~~~~~~~~~vi~~~~fG~~~~~---~---~~~~~~~~~~~~~~~~--~~~~~p~l~~l~~~-~~~~~~~~~~~  265 (499)
                       +++|+.+++..+++|+++.++||.++..   +   +++.+.+..+......  ....+|++.+++.. ..++..+..+.
T Consensus       169 -~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~  247 (517)
T PLN02687        169 -APVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRR  247 (517)
T ss_pred             -CceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHH
Confidence             6899999999999999999999988632   1   2233333333332211  11345655554322 23455666778


Q ss_pred             HHHHHHHHHHHHhhcC----cchhHHHHHHHHHHhhCC-CCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 047311          266 INSMILQVVKERSQSC----SHEKDLLQMILEAAKSCG-YYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLL  340 (499)
Q Consensus       266 l~~~~~~~i~~r~~~~----~~~~d~l~~ll~~~~~~~-~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L  340 (499)
                      +.+++.+.++++++..    ....|+++.+++...+++ ...+   ..++++++.+++..+++||+|||+++++|++|+|
T Consensus       248 ~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~---~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L  324 (517)
T PLN02687        248 FDAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEG---GRITDTEIKALLLNLFTAGTDTTSSTVEWAIAEL  324 (517)
T ss_pred             HHHHHHHHHHHHHHhccccCcccccHHHHHHHhhccccccccc---cCCCHHHHHHHHHHHhccccCchHHHHHHHHHHH
Confidence            8888999998887653    235699999998754321 0000   1288999999999999999999999999999999


Q ss_pred             hcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeeccccccccEEecCCCeEeecccc
Q 047311          341 AVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKFKDIVIPKGMGIQVPIPI  419 (499)
Q Consensus       341 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~G~~v~~~~~~  419 (499)
                      ++||++|+|+++|++++++.+..++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||+||.|.++.++
T Consensus       325 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~  404 (517)
T PLN02687        325 IRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWA  404 (517)
T ss_pred             HhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHH
Confidence            999999999999999999866667999999999999999999999999997 7999999999999999999999999999


Q ss_pred             cccCCCCcCCCCCCCCCCCCCCCccCC----CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCC
Q 047311          420 LQQNPEAWGSDAHEFNPERFANGVTAA----CKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQ  493 (499)
Q Consensus       420 ~~~d~~~~g~~p~~F~P~R~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~  493 (499)
                      +||||++| +||++|+||||+++....    ..+...++|||+|+|.|+|++||.+|+++++++||++|+|++.++..
T Consensus       405 ~h~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  481 (517)
T PLN02687        405 IARDPEQW-PDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQT  481 (517)
T ss_pred             hcCCcccC-CCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCC
Confidence            99999999 999999999999752211    12345799999999999999999999999999999999999987753


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=6.1e-73  Score=566.20  Aligned_cols=427  Identities=21%  Similarity=0.369  Sum_probs=333.5

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      +.||||+++|++||++.+..                      .+++.++.+|+++||++|++++++.++++++||+++++
T Consensus        29 ~~ppgp~~~p~~G~l~~l~~----------------------~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~   86 (502)
T PLN02966         29 KLPPGPSPLPVIGNLLQLQK----------------------LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKE   86 (502)
T ss_pred             CCCcCCCCCCeeccHHhcCC----------------------CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHH
Confidence            34999999999999987743                      14667899999999999999999999999999999999


Q ss_pred             HHhcCCCccCC-CCccccccCCCCc-Cce-eeccChhHHHHHhh-hCCcCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhc
Q 047311          117 INQCTSLSLGK-PSYLSKDRGPLLG-QGI-LASSGPLWVYQRKV-IAPELYLERVKGMVKLMVDSTTSIVKSWESRIESE  192 (499)
Q Consensus       117 i~~~~~~~~~~-~~~~~~~~~~~~g-~~l-~~~~g~~w~~~R~~-l~~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~  192 (499)
                      ++.+++..+.+ +........ ..| .++ +..+|+.|+.+|++ +.+.|+...+..+.+.+.+.++++++.|.+...  
T Consensus        87 vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~--  163 (502)
T PLN02966         87 LLKTQDVNFADRPPHRGHEFI-SYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAAD--  163 (502)
T ss_pred             HHHhCcccccCCCCCccceee-ccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence            99976655543 221111111 122 223 45579999999998 889999999999999999999999999976532  


Q ss_pred             CCceEEehHHHHHHHHHHHHHHHhhCCCCCchhHhHHHHHHHHH----HHhc--cCCCCCcccccCCC-c-chHHHHHHH
Q 047311          193 GGIAEIRVDRYMQSLAADVISRACFGSNYSKGQEIFSKFECLVL----AMSK--GAVGVPGLRYLPTK-N-NRDIWKLDK  264 (499)
Q Consensus       193 ~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~----~~~~--~~~~~p~l~~l~~~-~-~~~~~~~~~  264 (499)
                      ++ +.+|+.+++..+++|+++.++||.+++..++....+.+...    ....  ....+|++.+++.. . .+....+.+
T Consensus       164 ~~-~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  242 (502)
T PLN02966        164 KS-EVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFE  242 (502)
T ss_pred             CC-CceeHHHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHH
Confidence            33 57999999999999999999999987643222222222222    1111  11234443322211 1 122233455


Q ss_pred             HHHHHHHHHHHHHhhc---CcchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 047311          265 EINSMILQVVKERSQS---CSHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLA  341 (499)
Q Consensus       265 ~l~~~~~~~i~~r~~~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~  341 (499)
                      .+.+++.+.++++.+.   .....|+++.+++..+++...     ..++++++.+++.++++||+|||+++++|++|+|+
T Consensus       243 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~  317 (502)
T PLN02966        243 RQDTYIQEVVNETLDPKRVKPETESMIDLLMEIYKEQPFA-----SEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLM  317 (502)
T ss_pred             HHHHHHHHHHHHHHhccccccccccHHHHHHHHHhccCcC-----CCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Confidence            5666666666654322   123468999999776432111     12789999999999999999999999999999999


Q ss_pred             cChHHHHHHHHHHHHHhcc--CCCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeeccccccccEEecCCCeEeeccc
Q 047311          342 VYPEWQDRVRAEVLRVCKD--RCLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKFKDIVIPKGMGIQVPIP  418 (499)
Q Consensus       342 ~~p~~~~~l~~Ei~~~~~~--~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~G~~v~~~~~  418 (499)
                      +||++|+|+++|++++++.  +..++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||+||.|.++.+
T Consensus       318 ~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~  397 (502)
T PLN02966        318 KYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAW  397 (502)
T ss_pred             hCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecc
Confidence            9999999999999999864  2346999999999999999999999999997 689999999999999999999999999


Q ss_pred             ccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCCc
Q 047311          419 ILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQH  494 (499)
Q Consensus       419 ~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~~  494 (499)
                      ++||||++|||||++|+||||+++.......+..++|||.|+|+|+|++||++|+++++|+||++|+|++.++.+.
T Consensus       398 ~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~  473 (502)
T PLN02966        398 AVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKP  473 (502)
T ss_pred             cccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCc
Confidence            9999999999999999999999753221224568999999999999999999999999999999999999887543


No 12 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=9.2e-73  Score=563.00  Aligned_cols=426  Identities=19%  Similarity=0.293  Sum_probs=342.0

Q ss_pred             HhcCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHH
Q 047311           35 QKQGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLV  114 (499)
Q Consensus        35 ~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i  114 (499)
                      +.+.||||+++|++||++.+..                       +++.++.+|+++||+||++++|+.++++++||+++
T Consensus        29 ~~~~pPgp~~~Pl~G~l~~~~~-----------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~   85 (504)
T PLN00110         29 SRKLPPGPRGWPLLGALPLLGN-----------------------MPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAA   85 (504)
T ss_pred             cCCCcccCCCCCeeechhhcCC-----------------------chHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHH
Confidence            4456999999999999876643                       46678999999999999999999999999999999


Q ss_pred             HHHHhcCCCccCCCCccccccCCCC--cCceeeccChhHHHHHhhhCC-cCcHHHHHhhHHHHHHHHHHHHHHHHHHHhh
Q 047311          115 KEINQCTSLSLGKPSYLSKDRGPLL--GQGILASSGPLWVYQRKVIAP-ELYLERVKGMVKLMVDSTTSIVKSWESRIES  191 (499)
Q Consensus       115 ~~i~~~~~~~~~~~~~~~~~~~~~~--g~~l~~~~g~~w~~~R~~l~~-~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~  191 (499)
                      ++++.++...+.+............  +.+++..+|+.|+++|+++.+ .|+.+.++.+.+.+.++++.+++.+.+... 
T Consensus        86 ~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~-  164 (504)
T PLN00110         86 RAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQ-  164 (504)
T ss_pred             HHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhcc-
Confidence            9999976655543222111111122  346777889999999999985 699999999999999999999999876432 


Q ss_pred             cCCceEEehHHHHHHHHHHHHHHHhhCCCCC-c----hhHhHHHHHHHHHHHhc--cCCCCCcccccCCC-cchHHHHHH
Q 047311          192 EGGIAEIRVDRYMQSLAADVISRACFGSNYS-K----GQEIFSKFECLVLAMSK--GAVGVPGLRYLPTK-NNRDIWKLD  263 (499)
Q Consensus       192 ~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~-~----~~~~~~~~~~~~~~~~~--~~~~~p~l~~l~~~-~~~~~~~~~  263 (499)
                       +| +++|+.+++..+++|+++.++||.++. .    .+++...+..+......  ....+|.+.+++.. ..+...+..
T Consensus       165 -~g-~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~  242 (504)
T PLN00110        165 -RG-EPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLH  242 (504)
T ss_pred             -CC-CcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHH
Confidence             34 689999999999999999999998762 1    23344444444332221  12345655554322 224455567


Q ss_pred             HHHHHHHHHHHHHHhhcC---cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 047311          264 KEINSMILQVVKERSQSC---SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLL  340 (499)
Q Consensus       264 ~~l~~~~~~~i~~r~~~~---~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L  340 (499)
                      +.+.+++.+.++++++..   ....|+++.+++...... .     ..++++++.+++.++++||+|||+++++|++++|
T Consensus       243 ~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~-----~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L  316 (504)
T PLN00110        243 KKFDKLLTRMIEEHTASAHERKGNPDFLDVVMANQENST-G-----EKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEM  316 (504)
T ss_pred             HHHHHHHHHHHHHHHhhccccccCCChhhHHhhcccccC-C-----CCCCHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence            778788888888776532   134689999997542211 0     1288999999999999999999999999999999


Q ss_pred             hcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeeccccccccEEecCCCeEeecccc
Q 047311          341 AVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKFKDIVIPKGMGIQVPIPI  419 (499)
Q Consensus       341 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~G~~v~~~~~~  419 (499)
                      ++||++|+|+++|++++++++..++++++++|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.++
T Consensus       317 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~  396 (504)
T PLN00110        317 LKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWA  396 (504)
T ss_pred             HhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHH
Confidence            999999999999999999876667999999999999999999999999997 7899999999999999999999999999


Q ss_pred             cccCCCCcCCCCCCCCCCCCCCCccCCCC---CCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCC
Q 047311          420 LQQNPEAWGSDAHEFNPERFANGVTAACK---FPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQ  493 (499)
Q Consensus       420 ~~~d~~~~g~~p~~F~P~R~~~~~~~~~~---~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~  493 (499)
                      +||||++| +||++|+||||++.......   +...++|||+|+|.|+|++||.+|+++++++|+++|++++.++.+
T Consensus       397 ~h~d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  472 (504)
T PLN00110        397 IGRDPDVW-ENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVE  472 (504)
T ss_pred             hcCChhhc-CCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCc
Confidence            99999999 99999999999965221111   235799999999999999999999999999999999999987744


No 13 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.4e-72  Score=523.19  Aligned_cols=427  Identities=23%  Similarity=0.298  Sum_probs=361.1

Q ss_pred             CCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEe-ecCeeEEEecCHHHHHH
Q 047311           38 GVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYS-MGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        38 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~-~~~~~~vvv~d~~~i~~  116 (499)
                      .+|||+++|++|....+.+    ++.               .+.++.....+++||+||+.. +|+...|.+.||+.++.
T Consensus        51 ~IP~p~~~~~l~~l~~~~~----~~~---------------~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~  111 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRA----GGA---------------TKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEK  111 (519)
T ss_pred             hcCCCCCccHHHHHHHHHh----hhh---------------hHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHH
Confidence            5999999999999986443    111               277788999999999999999 88889999999999999


Q ss_pred             HHhcCCCccCCC-Cccc-cccCCCC--cCceeeccChhHHHHHhhhCCcC-cHHHHHhhHHHHHHHHHHHHHHHHHHHhh
Q 047311          117 INQCTSLSLGKP-SYLS-KDRGPLL--GQGILASSGPLWVYQRKVIAPEL-YLERVKGMVKLMVDSTTSIVKSWESRIES  191 (499)
Q Consensus       117 i~~~~~~~~~~~-~~~~-~~~~~~~--g~~l~~~~g~~w~~~R~~l~~~~-~~~~l~~~~~~i~~~~~~l~~~l~~~~~~  191 (499)
                      ++..++..--+| .... ......+  ..|++..+|++|.+.|..+++.+ .++.++.+.+.+++.++++++.+....+.
T Consensus       112 v~r~EG~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~  191 (519)
T KOG0159|consen  112 VFRNEGKYPFRPLLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDP  191 (519)
T ss_pred             HHhcCCCCCCcccccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence            999877554443 1111 1112222  36899999999999999999985 79999999999999999999999988774


Q ss_pred             cCCceEEehHHHHHHHHHHHHHHHhhCCCCCc--------hhHhHHHHHHHHHHHhccCCCCCcccccCCCcchHHHHHH
Q 047311          192 EGGIAEIRVDRYMQSLAADVISRACFGSNYSK--------GQEIFSKFECLVLAMSKGAVGVPGLRYLPTKNNRDIWKLD  263 (499)
Q Consensus       192 ~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~  263 (499)
                      ..+..+.|+.+.+.+++++.+|.++||++++.        .+.+.+++..++.....+....+++++++++.+++..++.
T Consensus       192 ~~~~~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~  271 (519)
T KOG0159|consen  192 ERGELVPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAW  271 (519)
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHH
Confidence            34447889999999999999999999999742        2345555555555554444445789999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCc-------chhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHH
Q 047311          264 KEINSMILQVVKERSQSCS-------HEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWA  336 (499)
Q Consensus       264 ~~l~~~~~~~i~~r~~~~~-------~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~  336 (499)
                      +.+.++..+.|++..+...       ...+++-.++...   .         ++.+++..+++++++||.|||+.++.|+
T Consensus       272 D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~~---~---------l~~k~~~~~~~dll~aGvDTTs~tl~~~  339 (519)
T KOG0159|consen  272 DQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLRK---E---------LSRKDAKANVMDLLAAGVDTTSNTLLWA  339 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHc---c---------CCHHHHHHHHHHHHHHhccchHHHHHHH
Confidence            9999999999988765531       1123333333332   2         7899999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHHHhcc-CCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEee
Q 047311          337 LMLLAVYPEWQDRVRAEVLRVCKD-RCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQV  415 (499)
Q Consensus       337 l~~L~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~  415 (499)
                      ||+|++||++|++|++|+.++.+. +..++.+++.+||||.||||||+||||.+|+..|...+|.+++||.|||||.|.+
T Consensus       340 Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l  419 (519)
T KOG0159|consen  340 LYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVL  419 (519)
T ss_pred             HHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEE
Confidence            999999999999999999999976 6777999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCCcC
Q 047311          416 PIPILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQHC  495 (499)
Q Consensus       416 ~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~~~  495 (499)
                      +.+.+.+||++| ++|++|+||||+++.. ...++..++|||.|+|+|+||++|++|+.+.||+|+++|+++..++.+..
T Consensus       420 ~~~~~~r~~~~F-~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~  497 (519)
T KOG0159|consen  420 FLYVLGRNPAYF-PDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVE  497 (519)
T ss_pred             eehhhccChhhC-CCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCcc
Confidence            999999999999 9999999999999743 55678999999999999999999999999999999999999998875554


Q ss_pred             CC
Q 047311          496 PV  497 (499)
Q Consensus       496 ~~  497 (499)
                      ..
T Consensus       498 ~~  499 (519)
T KOG0159|consen  498 YV  499 (519)
T ss_pred             ce
Confidence            43


No 14 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.5e-72  Score=556.09  Aligned_cols=408  Identities=22%  Similarity=0.264  Sum_probs=332.9

Q ss_pred             CCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHHH
Q 047311           38 GVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKEI  117 (499)
Q Consensus        38 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~i  117 (499)
                      .||||+++|++||++.+.+                       ++..++.+++++||++|++++|+.++++++||+.++++
T Consensus        32 ~ppgp~~~P~~G~~~~~~~-----------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~i   88 (463)
T PLN02774         32 LPPGTMGWPLFGETTEFLK-----------------------QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYI   88 (463)
T ss_pred             CCCCCCCCCchhhHHHHHH-----------------------hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHH
Confidence            3789999999999988765                       45568999999999999999999999999999999999


Q ss_pred             HhcCCCccCCCCccccccCCCCcCceeeccChhHHHHHhhhCCcCcHHHHHh-hHHHHHHHHHHHHHHHHHHHhhcCCce
Q 047311          118 NQCTSLSLGKPSYLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLERVKG-MVKLMVDSTTSIVKSWESRIESEGGIA  196 (499)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~~  196 (499)
                      +.++...+.+... ......+.+.+++..+|+.|+++|+++.+.|+...++. +.+.+.+.+++++++|..      + +
T Consensus        89 l~~~~~~~~~~~~-~~~~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~  160 (463)
T PLN02774         89 LMNEGKGLVPGYP-QSMLDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDG------L-K  160 (463)
T ss_pred             HcCCCCeEEecCC-HHHHHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCC------C-C
Confidence            9876655533211 11111122346777899999999999999999998886 788888888888877632      2 4


Q ss_pred             EEehHHHHHHHHHHHHHHHhhCCCCCch-hHhHHHHHHHHHHHhccCCCCCcccccCCCcchHHHHHHHHHHHHHHHHHH
Q 047311          197 EIRVDRYMQSLAADVISRACFGSNYSKG-QEIFSKFECLVLAMSKGAVGVPGLRYLPTKNNRDIWKLDKEINSMILQVVK  275 (499)
Q Consensus       197 ~~dl~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~l~~~~~~~i~  275 (499)
                      ++|+.+.+..+++++++.++||.+.+.. +++...+..+    ......+|.  ++|....++..++.+.+.+++.+.++
T Consensus       161 ~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~--~lp~~~~~~~~~~~~~~~~~~~~~i~  234 (463)
T PLN02774        161 TIDIQEKTKEMALLSALKQIAGTLSKPISEEFKTEFFKL----VLGTLSLPI--DLPGTNYRSGVQARKNIVRMLRQLIQ  234 (463)
T ss_pred             CEEeeHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH----hcccccCCc--CCCChhhhHHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999999875431 2222222221    111112232  34443445667788899999999999


Q ss_pred             HHhhcCcchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 047311          276 ERSQSCSHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAVYPEWQDRVRAEVL  355 (499)
Q Consensus       276 ~r~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  355 (499)
                      ++++.....+|+++.+++...++.        .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       235 ~r~~~~~~~~d~l~~ll~~~~~~~--------~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~  306 (463)
T PLN02774        235 ERRASGETHTDMLGYLMRKEGNRY--------KLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHL  306 (463)
T ss_pred             HHHhcCCCcccHHHHHHhCccCCC--------CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            887765556799999987432111        178999999999999999999999999999999999999999999999


Q ss_pred             HHhcc---CCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEeecccccccCCCCcCCCCC
Q 047311          356 RVCKD---RCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQVPIPILQQNPEAWGSDAH  432 (499)
Q Consensus       356 ~~~~~---~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~  432 (499)
                      ++++.   +..+++++++++||++|||+|+||++|+++.+.|.+.+|++++||.||||+.|+++.+.+||||++| +||+
T Consensus       307 ~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~-~dP~  385 (463)
T PLN02774        307 AIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLY-PDPM  385 (463)
T ss_pred             HHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccC-CChh
Confidence            99863   3456999999999999999999999999998889999999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCCc
Q 047311          433 EFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQH  494 (499)
Q Consensus       433 ~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~~  494 (499)
                      +|+||||++++.   .....++|||+|+|+|||+++|.+|+++++++|+++|+|++.++.+.
T Consensus       386 ~F~PeRfl~~~~---~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~  444 (463)
T PLN02774        386 TFNPWRWLDKSL---ESHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL  444 (463)
T ss_pred             ccCchhcCCCCc---CCCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc
Confidence            999999996521   11236999999999999999999999999999999999999877553


No 15 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=9.5e-72  Score=560.21  Aligned_cols=423  Identities=20%  Similarity=0.324  Sum_probs=338.4

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      +.||||+++|++||++++..                       +++.++.+|+++||++|++++++.++++++||+++++
T Consensus        32 ~~ppgp~~~pl~G~~~~~~~-----------------------~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~   88 (514)
T PLN03112         32 RLPPGPPRWPIVGNLLQLGP-----------------------LPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIRE   88 (514)
T ss_pred             CCccCCCCCCeeeeHHhcCC-----------------------chHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHH
Confidence            35899999999999987754                       5667899999999999999999999999999999999


Q ss_pred             HHhcCCCccCCCCccccccCCCCc--CceeeccChhHHHHHhhh-CCcCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhcC
Q 047311          117 INQCTSLSLGKPSYLSKDRGPLLG--QGILASSGPLWVYQRKVI-APELYLERVKGMVKLMVDSTTSIVKSWESRIESEG  193 (499)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~g--~~l~~~~g~~w~~~R~~l-~~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~  193 (499)
                      ++.++...+.+...........+|  .+++..+|+.|+.+|+++ .+.|+.++++.+.+.+.++++.+++.+.+...  .
T Consensus        89 vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~--~  166 (514)
T PLN03112         89 ILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ--T  166 (514)
T ss_pred             HHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc--c
Confidence            998766666443222211122233  345667899999999995 46899999999999999999999998765432  3


Q ss_pred             CceEEehHHHHHHHHHHHHHHHhhCCCCCch--------hHhHHHHHHHHHHHhc--cCCCCCcccccCC-CcchHHHHH
Q 047311          194 GIAEIRVDRYMQSLAADVISRACFGSNYSKG--------QEIFSKFECLVLAMSK--GAVGVPGLRYLPT-KNNRDIWKL  262 (499)
Q Consensus       194 ~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~p~l~~l~~-~~~~~~~~~  262 (499)
                      + .++|+.+.+..+++++++.++||.++...        .++...+..+......  ....+|.+.+++. ...++..++
T Consensus       167 ~-~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  245 (514)
T PLN03112        167 G-KPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREV  245 (514)
T ss_pred             C-CeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHH
Confidence            3 68999999999999999999999986321        1222222222222111  1223565555532 223455667


Q ss_pred             HHHHHHHHHHHHHHHhhcC------cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHH
Q 047311          263 DKEINSMILQVVKERSQSC------SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWA  336 (499)
Q Consensus       263 ~~~l~~~~~~~i~~r~~~~------~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~  336 (499)
                      .+.+.+++.+.++++++..      .+..|+++.+++...+++.      ..++++++.+++..+++||+|||+++++|+
T Consensus       246 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~  319 (514)
T PLN03112        246 EKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGK------EHMDDVEIKALMQDMIAAATDTSAVTNEWA  319 (514)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccc------cCCCHHHHHHHHHHHhccccccHHHHHHHH
Confidence            7778888888887765531      2346899999986533221      117899999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeeccccccccEEecCCCeEee
Q 047311          337 LMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKFKDIVIPKGMGIQV  415 (499)
Q Consensus       337 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~G~~v~~  415 (499)
                      +++|++||++|+|+++|++++++.+..++++++.+|||++|||+|++|++|+++. ++|.+.+|++++||.|||||.|.+
T Consensus       320 l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~  399 (514)
T PLN03112        320 MAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFI  399 (514)
T ss_pred             HHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEE
Confidence            9999999999999999999999876667999999999999999999999999997 689999999999999999999999


Q ss_pred             cccccccCCCCcCCCCCCCCCCCCCCCccC--CC--CCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCC
Q 047311          416 PIPILQQNPEAWGSDAHEFNPERFANGVTA--AC--KFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPN  491 (499)
Q Consensus       416 ~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~--~~--~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~  491 (499)
                      +.+++||||++| +||++|+||||......  ..  .....++|||+|+|.|+|+++|++|+++++++||++|+|++.++
T Consensus       400 ~~~~~h~d~~~~-~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  478 (514)
T PLN03112        400 NTHGLGRNTKIW-DDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDG  478 (514)
T ss_pred             ehHHhhCCcccC-CChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence            999999999999 99999999998653211  11  12457999999999999999999999999999999999998766


Q ss_pred             C
Q 047311          492 Y  492 (499)
Q Consensus       492 ~  492 (499)
                      .
T Consensus       479 ~  479 (514)
T PLN03112        479 L  479 (514)
T ss_pred             C
Confidence            4


No 16 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=9e-72  Score=559.32  Aligned_cols=422  Identities=23%  Similarity=0.305  Sum_probs=325.3

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      ..||||+++|++|++..+..                      ...+..+.+|+++||+||++++|+.++++++||+.+++
T Consensus        30 ~~pPgp~~~p~~g~l~~~~~----------------------~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~   87 (503)
T PLN02394         30 KLPPGPAAVPIFGNWLQVGD----------------------DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKE   87 (503)
T ss_pred             CCCcCCCCCCeeeeHHhcCC----------------------CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHH
Confidence            35999999999999987643                      12456899999999999999999999999999999999


Q ss_pred             HHhcCCCccCC-CC-ccccccCCCCcCceeeccChhHHHHHhhhC-CcCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhcC
Q 047311          117 INQCTSLSLGK-PS-YLSKDRGPLLGQGILASSGPLWVYQRKVIA-PELYLERVKGMVKLMVDSTTSIVKSWESRIESEG  193 (499)
Q Consensus       117 i~~~~~~~~~~-~~-~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~-~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~  193 (499)
                      ++.+++..+.+ +. .....+....+.+++..+|+.|+++|+.+. +.|+++.++.+.+.++++++++++.|.+.... .
T Consensus        88 il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~-~  166 (503)
T PLN02394         88 VLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEA-A  166 (503)
T ss_pred             HHHhCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhc-c
Confidence            99876655532 21 111111111224477788999999999996 88999999999999999999999999765321 2


Q ss_pred             CceEEehHHHHHHHHHHHHHHHhhCCCCCch-hHhHHHHHHHHHHHhcc--------CCCCCcccccCCCcchHHHHHHH
Q 047311          194 GIAEIRVDRYMQSLAADVISRACFGSNYSKG-QEIFSKFECLVLAMSKG--------AVGVPGLRYLPTKNNRDIWKLDK  264 (499)
Q Consensus       194 ~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~p~l~~l~~~~~~~~~~~~~  264 (499)
                      + ..+|+.+.+..+++|+++.++||.+++.. +..+..+..........        ...+|++........+.......
T Consensus       167 ~-~~v~~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (503)
T PLN02394        167 T-EGVVIRRRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKE  245 (503)
T ss_pred             C-CcEecHHHHHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHH
Confidence            2 46899999999999999999999988542 22333332332221110        11223222110011111111112


Q ss_pred             HHHH-HHHHHHHHHhhc-------CcchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHH
Q 047311          265 EINS-MILQVVKERSQS-------CSHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWA  336 (499)
Q Consensus       265 ~l~~-~~~~~i~~r~~~-------~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~  336 (499)
                      .... +....++++++.       .+...|+++.+++...++.         ++++++..++.++++||+|||+++++|+
T Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~---------l~~~~i~~~~~~~~~AG~dTTa~tl~~~  316 (503)
T PLN02394        246 RRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKGE---------INEDNVLYIVENINVAAIETTLWSIEWG  316 (503)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhccccCC---------CCHHHHHHHHHHHHHhchhhHHHHHHHH
Confidence            1122 223345544331       1234689999998654322         7899999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeeccccccccEEecCCCeEee
Q 047311          337 LMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKFKDIVIPKGMGIQV  415 (499)
Q Consensus       337 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~G~~v~~  415 (499)
                      +|+|++||++|+||++||+++++.+..++++++++||||+|||+|+||++|++|. .+|.+.+|++++||.||+||.|.+
T Consensus       317 l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~  396 (503)
T PLN02394        317 IAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILV  396 (503)
T ss_pred             HHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEE
Confidence            9999999999999999999999866667999999999999999999999999998 479999999999999999999999


Q ss_pred             cccccccCCCCcCCCCCCCCCCCCCCCccC--CCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCC
Q 047311          416 PIPILQQNPEAWGSDAHEFNPERFANGVTA--ACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNY  492 (499)
Q Consensus       416 ~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~  492 (499)
                      +.+++||||++| +||++|+||||++.+..  .......++|||.|+|+|+|+++|.+|+++++|+|+++|++++.+|.
T Consensus       397 ~~~~~~rd~~~~-~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~  474 (503)
T PLN02394        397 NAWWLANNPELW-KNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ  474 (503)
T ss_pred             chHHHhCCcccC-CCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC
Confidence            999999999999 99999999999975221  12235679999999999999999999999999999999999998876


No 17 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.2e-71  Score=558.64  Aligned_cols=428  Identities=21%  Similarity=0.303  Sum_probs=336.0

Q ss_pred             HHhcCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHH
Q 047311           34 LQKQGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDL  113 (499)
Q Consensus        34 ~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~  113 (499)
                      .+.+.||||+++|++||++.+...                    ..++++++.+|+++||++|++++|+.++++++||++
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~--------------------~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~   91 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNS--------------------SADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRL   91 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccc--------------------cccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHH
Confidence            344568999999999999766420                    125677899999999999999999999999999999


Q ss_pred             HHHHHhcCCCcc-CCCCccccccCCC-CcCceee--ccChhHHHHHh-hhCCcCcHHHHHhhHHHHHHHHHHHHHHHHHH
Q 047311          114 VKEINQCTSLSL-GKPSYLSKDRGPL-LGQGILA--SSGPLWVYQRK-VIAPELYLERVKGMVKLMVDSTTSIVKSWESR  188 (499)
Q Consensus       114 i~~i~~~~~~~~-~~~~~~~~~~~~~-~g~~l~~--~~g~~w~~~R~-~l~~~~~~~~l~~~~~~i~~~~~~l~~~l~~~  188 (499)
                      +++++.+++..+ .++...  ..... .+.+++.  .+|+.|+++|| ++.+.|+.++++.+.+.+.++++.+++.|.+.
T Consensus        92 ~~~il~~~~~~f~~rp~~~--~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~  169 (519)
T PLN00168         92 AHAALVERGAALADRPAVA--SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRRE  169 (519)
T ss_pred             HHHHHHhcCCccccCCccc--chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999776666 343321  11111 1223443  67999999886 79999999999999999999999999999754


Q ss_pred             HhhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCchhHhHHHHHHHHHH----Hhc---cCCCCCccccc-CCCcchHHH
Q 047311          189 IESEGGIAEIRVDRYMQSLAADVISRACFGSNYSKGQEIFSKFECLVLA----MSK---GAVGVPGLRYL-PTKNNRDIW  260 (499)
Q Consensus       189 ~~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~----~~~---~~~~~p~l~~l-~~~~~~~~~  260 (499)
                      ..  .+ ..+|+.+.+..++.++++.++||.+++...  ...+......    ...   ....+|.+... .....++..
T Consensus       170 ~~--~~-~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~  244 (519)
T PLN00168        170 AE--DA-AAPRVVETFQYAMFCLLVLMCFGERLDEPA--VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKAL  244 (519)
T ss_pred             cC--CC-CCcCHHHHHHHHHHHHHHHHHcCCCcChhh--HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHH
Confidence            32  22 468999999999999999999999886421  1122222221    111   11234433211 111233455


Q ss_pred             HHHHHHHHHHHHHHHHHhhcC------c--------chhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhh
Q 047311          261 KLDKEINSMILQVVKERSQSC------S--------HEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGH  326 (499)
Q Consensus       261 ~~~~~l~~~~~~~i~~r~~~~------~--------~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~  326 (499)
                      ++.+.+.+++.+.++++++..      .        ...|+++.|++....+...     ..++++++.+++.++++||+
T Consensus       245 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~-----~~lt~~~i~~~~~~l~~AG~  319 (519)
T PLN00168        245 ALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGD-----RALTDDEIVNLCSEFLNAGT  319 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhcccccc-----CCCCHHHHHHHHHHHHHhcc
Confidence            677788888888888765431      0        1458999999764321111     12899999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccC-CCCChhhhhcChhHHHHHHhhhcCCCCCcc-cceeecccccccc
Q 047311          327 ETSAVTSSWALMLLAVYPEWQDRVRAEVLRVCKDR-CLLDSTMLSSMKTLTMVIQETLRLYPPAGF-VFREALDDIKFKD  404 (499)
Q Consensus       327 ~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g  404 (499)
                      |||+++++|++++|++||++|+|+++||+++++++ ..++.+++.+||||+|||+|++|++|+++. ++|.+.+|++++|
T Consensus       320 dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g  399 (519)
T PLN00168        320 DTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGG  399 (519)
T ss_pred             hHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCC
Confidence            99999999999999999999999999999999753 456999999999999999999999999987 5899999999999


Q ss_pred             EEecCCCeEeecccccccCCCCcCCCCCCCCCCCCCCCccC-----CCCCCCcccccCCCCCCCcchHHHHHHHHHHHHH
Q 047311          405 IVIPKGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVTA-----ACKFPQAYMPFGAGPRACAGQHFALAELKVILSL  479 (499)
Q Consensus       405 ~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~  479 (499)
                      |.|||||.|.++.+++||||++| |||++|+||||++....     ...++..++|||.|+|+|+|++||++|+++++++
T Consensus       400 ~~IpkGt~v~~~~~~~~~d~~~~-~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~  478 (519)
T PLN00168        400 YLIPKGATVNFMVAEMGRDEREW-ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVAN  478 (519)
T ss_pred             EEECCCCEEEEChHHHhcCcccc-CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999999999999 99999999999974221     1123457999999999999999999999999999


Q ss_pred             HhhcceEEeCCCCCc
Q 047311          480 LLSKFSFSLSPNYQH  494 (499)
Q Consensus       480 ll~~f~i~~~~~~~~  494 (499)
                      ||++|+|++.++.+.
T Consensus       479 ll~~f~~~~~~~~~~  493 (519)
T PLN00168        479 MVREFEWKEVPGDEV  493 (519)
T ss_pred             HHHHccceeCCCCcC
Confidence            999999999876443


No 18 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.5e-71  Score=551.63  Aligned_cols=428  Identities=18%  Similarity=0.230  Sum_probs=335.4

Q ss_pred             HHHHHhcCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceE---EeecCeeEEE
Q 047311           31 RALLQKQGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYI---YSMGSIQIFC  107 (499)
Q Consensus        31 ~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~---~~~~~~~~vv  107 (499)
                      ..+|+++++|||++||++||+..+..+                 .   ...++++.+..++||..++   .++|+.++++
T Consensus        25 ~~~~~~~~~p~p~~~pl~G~~~~~~~~-----------------~---~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vv   84 (500)
T PLN02169         25 FIHKKPHGQPILKNWPFLGMLPGMLHQ-----------------I---PRIYDWTVEVLEASNLTFYFKGPWLSGTDMLF   84 (500)
T ss_pred             HHHhccCCCCCCCCCCcccchHHHHHc-----------------c---CcHHHHHHHHHHhCCCcEEEEeeccCCCCeEE
Confidence            445777789999999999999877641                 1   1355566666667897766   5788999999


Q ss_pred             ecCHHHHHHHHhcCCCccCCCCccccccCCCCcCceeeccChhHHHHHhhhCCcCcHHHHHhh--HHHHHHHHHHHHHHH
Q 047311          108 TTDVDLVKEINQCTSLSLGKPSYLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLERVKGM--VKLMVDSTTSIVKSW  185 (499)
Q Consensus       108 v~d~~~i~~i~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~--~~~i~~~~~~l~~~l  185 (499)
                      |+||+.+++|+.++...+.++.... ......|.|+++++|+.|+++||+++|.|+...+..+  .+.+.+.++.+++.+
T Consensus        85 v~dpe~i~~il~~~~~~~~k~~~~~-~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l  163 (500)
T PLN02169         85 TADPKNIHHILSSNFGNYPKGPEFK-KIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFL  163 (500)
T ss_pred             EcCHHHHHHHHhhCcccCCCcHHHH-HHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997666665543222 2234568899999999999999999999998877642  366777788888888


Q ss_pred             HHHHhhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCch------hHhHHHHHHHHHHHhccCCCCCcc-----cccCCC
Q 047311          186 ESRIESEGGIAEIRVDRYMQSLAADVISRACFGSNYSKG------QEIFSKFECLVLAMSKGAVGVPGL-----RYLPTK  254 (499)
Q Consensus       186 ~~~~~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~p~l-----~~l~~~  254 (499)
                      .+...  ++ .++|+.+.+.++++|+++.++||.+.+..      .++...+........ .....|++     .+++..
T Consensus       164 ~~~~~--~~-~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~  239 (500)
T PLN02169        164 DNAAH--EN-IIIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY-YRHFKPVILWRLQNWIGIG  239 (500)
T ss_pred             HHHHh--cC-CeEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH-hHHhccHHHHHHHHHhCCc
Confidence            75433  33 68999999999999999999999876421      123333333222211 12233432     123344


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcC-------cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhh
Q 047311          255 NNRDIWKLDKEINSMILQVVKERSQSC-------SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHE  327 (499)
Q Consensus       255 ~~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~  327 (499)
                      ..++..++.+.+.+++.+.|++|++..       +..+|+++.+++....+... .   ..++++++.+++.++++||+|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~-~---~~~~~~~i~~~~~~~l~AG~d  315 (500)
T PLN02169        240 LERKMRTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKL-L---KPKKDKFIRDVIFSLVLAGRD  315 (500)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhcccccccc-c---cCCChHHHHHHHHHHHHhchh
Confidence            456677888899999999998886531       12368999998764211100 0   126788999999999999999


Q ss_pred             hHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeecccccc-ccEE
Q 047311          328 TSAVTSSWALMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKF-KDIV  406 (499)
Q Consensus       328 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i-~g~~  406 (499)
                      ||+++++|++|+|+.||++|+|+++||++++      +++++.+||||+|||+||||++|++|.+.|.+.+|.++ +||.
T Consensus       316 TTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~  389 (500)
T PLN02169        316 TTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHK  389 (500)
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEE
Confidence            9999999999999999999999999999874      78999999999999999999999999988888776665 9999


Q ss_pred             ecCCCeEeecccccccCCCCcCCCCCCCCCCCCCCCccCCC-CCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcce
Q 047311          407 IPKGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVTAAC-KFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFS  485 (499)
Q Consensus       407 ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~  485 (499)
                      |||||.|.++.+++||||++||+||++|+||||++...... ..+..++|||+|+|+|+|++||++|+++++++|+++|+
T Consensus       390 IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~  469 (500)
T PLN02169        390 VDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYD  469 (500)
T ss_pred             ECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCE
Confidence            99999999999999999999988999999999996522211 23678999999999999999999999999999999999


Q ss_pred             EEeCCCCC
Q 047311          486 FSLSPNYQ  493 (499)
Q Consensus       486 i~~~~~~~  493 (499)
                      +++.++.+
T Consensus       470 ~~~~~~~~  477 (500)
T PLN02169        470 FKVIEGHK  477 (500)
T ss_pred             EEEcCCCC
Confidence            99976643


No 19 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.1e-71  Score=557.55  Aligned_cols=423  Identities=22%  Similarity=0.314  Sum_probs=328.3

Q ss_pred             HhcCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHh---CCceEEeecCeeEEEecCH
Q 047311           35 QKQGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDY---GSRYIYSMGSIQIFCTTDV  111 (499)
Q Consensus        35 ~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ky---G~i~~~~~~~~~~vvv~d~  111 (499)
                      +++.+|||+++|++||++.+..                       + +..+.+|.++|   |++|++++|+.++++++||
T Consensus        28 ~~~~~pgp~~~p~~G~~~~~~~-----------------------~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p   83 (516)
T PLN03195         28 SQRNRKGPKSWPIIGAALEQLK-----------------------N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADP   83 (516)
T ss_pred             hccccCCCCCCCeecchHHHHh-----------------------c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCH
Confidence            3345899999999999876644                       1 12456777777   8999999999999999999


Q ss_pred             HHHHHHHhcCCCccCCCCccccccCCCCcCceeeccChhHHHHHhhhCCcCcHHHHHhhHHHH-HHHHHHHHHHHHHHHh
Q 047311          112 DLVKEINQCTSLSLGKPSYLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLERVKGMVKLM-VDSTTSIVKSWESRIE  190 (499)
Q Consensus       112 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~~~~i-~~~~~~l~~~l~~~~~  190 (499)
                      +++++|+.++...+.+...+........|.++++.+|+.|+++||++++.|+...++.+.+.+ .+.++.+++.+.+...
T Consensus        84 ~~~~~il~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~  163 (516)
T PLN03195         84 VNVEHVLKTNFANYPKGEVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASF  163 (516)
T ss_pred             HHHHHHHhhCccccCCcHhHHHHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999986544554432222122233567888889999999999999999999999999876 6667777777765322


Q ss_pred             hcCCceEEehHHHHHHHHHHHHHHHhhCCCCCch------hHhHHHHHHHHHHHhccCCCCCcc--c-ccCCCcchHHHH
Q 047311          191 SEGGIAEIRVDRYMQSLAADVISRACFGSNYSKG------QEIFSKFECLVLAMSKGAVGVPGL--R-YLPTKNNRDIWK  261 (499)
Q Consensus       191 ~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~p~l--~-~l~~~~~~~~~~  261 (499)
                        ++ .++|+.+++..+++|+++.++||.+++..      +.+...+........ .....|.+  . +++....+...+
T Consensus       164 --~~-~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~  239 (516)
T PLN03195        164 --AN-QVVDMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVT-LRFIDPLWKLKKFLNIGSEALLSK  239 (516)
T ss_pred             --cC-CeEcHHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHH-HHHhcchhhHHHhcccchHHHHHH
Confidence              33 67999999999999999999999987531      123333333222111 11111221  1 122112234455


Q ss_pred             HHHHHHHHHHHHHHHHhhcC--------cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHH
Q 047311          262 LDKEINSMILQVVKERSQSC--------SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTS  333 (499)
Q Consensus       262 ~~~~l~~~~~~~i~~r~~~~--------~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l  333 (499)
                      +.+.+.+++.+.++++++..        ....|+++.+++...+.+       ..++++++++++.++++||+|||++++
T Consensus       240 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-------~~l~~~~i~~~~~~ll~AG~dTTa~tl  312 (516)
T PLN03195        240 SIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDPD-------SNFTDKSLRDIVLNFVIAGRDTTATTL  312 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCCC-------CCCCHHHHHHHHHHHHHHhhHhHHHHH
Confidence            67778888888887765431        124689999987543211       128899999999999999999999999


Q ss_pred             HHHHHHHhcChHHHHHHHHHHHHHhcc--------------------CCCCChhhhhcChhHHHHHHhhhcCCCCCcccc
Q 047311          334 SWALMLLAVYPEWQDRVRAEVLRVCKD--------------------RCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVF  393 (499)
Q Consensus       334 ~~~l~~L~~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~  393 (499)
                      +|++|+|++||++|+||++|+++++++                    +..++++++.+||||+|||+|+||++|++|...
T Consensus       313 ~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~  392 (516)
T PLN03195        313 SWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP  392 (516)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh
Confidence            999999999999999999999998642                    234699999999999999999999999999888


Q ss_pred             eeecccccc-ccEEecCCCeEeecccccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHH
Q 047311          394 REALDDIKF-KDIVIPKGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAE  472 (499)
Q Consensus       394 R~~~~~~~i-~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~  472 (499)
                      |.+.+|.++ +||.|||||.|.++.+++||||++||+||++|+||||++++......+..++|||+|+|+|+|++||++|
T Consensus       393 r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e  472 (516)
T PLN03195        393 KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQ  472 (516)
T ss_pred             hhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHH
Confidence            888777666 8999999999999999999999999999999999999964221223456799999999999999999999


Q ss_pred             HHHHHHHHhhcceEEeCCCC
Q 047311          473 LKVILSLLLSKFSFSLSPNY  492 (499)
Q Consensus       473 ~~~~l~~ll~~f~i~~~~~~  492 (499)
                      +++++++|+++|++++.++.
T Consensus       473 ~~~~la~ll~~f~~~~~~~~  492 (516)
T PLN03195        473 MKMALALLCRFFKFQLVPGH  492 (516)
T ss_pred             HHHHHHHHHHhceeEecCCC
Confidence            99999999999999987664


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.2e-72  Score=563.87  Aligned_cols=426  Identities=32%  Similarity=0.532  Sum_probs=357.0

Q ss_pred             CCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHHHH
Q 047311           39 VKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKEIN  118 (499)
Q Consensus        39 ~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~i~  118 (499)
                      ||||+++|++||++.+.+                     .+++++++.+|+++||+||++++++.++++|+||+.+++++
T Consensus         1 Ppgp~~~p~~G~~~~~~~---------------------~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il   59 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR---------------------KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEIL   59 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT---------------------THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC---------------------CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccc
Confidence            799999999999999984                     13778899999999999999999999999999999999999


Q ss_pred             hcCCCccCCCC---ccccccCCCCcCceeeccChhHHHHHhhhCCcCcHH-HHHhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 047311          119 QCTSLSLGKPS---YLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLE-RVKGMVKLMVDSTTSIVKSWESRIESEGG  194 (499)
Q Consensus       119 ~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~-~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  194 (499)
                      .++...+....   ..........+.+++..+++.|+.+|+++.+.|+.. .+ .+.+.+.+.++.+++.|.+....  +
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~--~  136 (463)
T PF00067_consen   60 RSRSKYFSFRPRPPWFEIFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGS--S  136 (463)
T ss_dssp             TTTTTTEEEEHCHHHHHHHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTS--E
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc--c
Confidence            97765553321   111111235678888899999999999999999988 66 89999999999999999887542  1


Q ss_pred             ceEEehHHHHHHHHHHHHHHHhhCCCCC-chh----HhHHHHHHHHHHHhc----cCCCCCcccccCCCcchHHHHHHHH
Q 047311          195 IAEIRVDRYMQSLAADVISRACFGSNYS-KGQ----EIFSKFECLVLAMSK----GAVGVPGLRYLPTKNNRDIWKLDKE  265 (499)
Q Consensus       195 ~~~~dl~~~~~~~~~~vi~~~~fG~~~~-~~~----~~~~~~~~~~~~~~~----~~~~~p~l~~l~~~~~~~~~~~~~~  265 (499)
                       ..+|+.+++..+++|+++.++||.+++ ..+    ++.+.+..+...+..    ....+|++.+++....+...++.+.
T Consensus       137 -~~vd~~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  215 (463)
T PF00067_consen  137 -GPVDLFDWLRRFALDVIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDR  215 (463)
T ss_dssp             -SEEEHHHHHHHHHHHHHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHH
T ss_pred             -ceeeeecccccccccccccccccceeeeccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             379999999999999999999999865 222    233444444433211    3344566666776667777778889


Q ss_pred             HHHHHHHHHHHHhhcCc----chhHHHHHHHHHH-hhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 047311          266 INSMILQVVKERSQSCS----HEKDLLQMILEAA-KSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLL  340 (499)
Q Consensus       266 l~~~~~~~i~~r~~~~~----~~~d~l~~ll~~~-~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L  340 (499)
                      +.+++.+.+++++++.+    ...|+++.+++.. +.++.      ..+++++++.++..+++||++||+.+++|++++|
T Consensus       216 ~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~------~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L  289 (463)
T PF00067_consen  216 LRKYIKEIIEERREELDDGDESRRDLLDSLLQASSDSDGP------SGLSDEEIAAELLTLLFAGHDTTASTLSWTLYEL  289 (463)
T ss_dssp             HHHHHHHHHHHHHHSHHSSSSSCSSHHHHHHHHHHTTTTT------SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccc
Confidence            99999999999887652    4579999999987 22221      1289999999999999999999999999999999


Q ss_pred             hcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCc-ccceeeccccccccEEecCCCeEeecccc
Q 047311          341 AVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAG-FVFREALDDIKFKDIVIPKGMGIQVPIPI  419 (499)
Q Consensus       341 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~G~~v~~~~~~  419 (499)
                      ++||++|++|++||+++.+++..++.+++.+||||+|||+|++|++|+++ .++|.+.+|++++||.|||||.|.++.++
T Consensus       290 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~  369 (463)
T PF00067_consen  290 AKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYA  369 (463)
T ss_dssp             HHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999977667799999999999999999999999999 58999999999999999999999999999


Q ss_pred             cccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCCcCC
Q 047311          420 LQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQHCP  496 (499)
Q Consensus       420 ~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~~~~  496 (499)
                      +||||++| +||++|+||||++.......++..++|||.|+|.|||++||++|+++++++||++|++++.++.+.+|
T Consensus       370 ~~~d~~~~-~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~  445 (463)
T PF00067_consen  370 LHRDPEYF-PDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP  445 (463)
T ss_dssp             HTTSTTTS-SSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE
T ss_pred             cccccccc-ccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC
Confidence            99999999 99999999999987442345688999999999999999999999999999999999999987766544


No 21 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=5.8e-71  Score=545.84  Aligned_cols=402  Identities=25%  Similarity=0.391  Sum_probs=335.0

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      ..||||+++|++||++++..                      ++++.++.+++++||++|++++++.++++++||+++++
T Consensus        35 ~~Ppgp~~~P~iG~~~~~~~----------------------~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~   92 (463)
T PLN02196         35 PLPPGTMGWPYVGETFQLYS----------------------QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKF   92 (463)
T ss_pred             CCCCCCCCCCccchHHHHHh----------------------cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHH
Confidence            45888888999999987654                      26777999999999999999999999999999999999


Q ss_pred             HHhcCCCccCCCCccccccCCCCc-CceeeccChhHHHHHhhhCCcCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCc
Q 047311          117 INQCTSLSLGKPSYLSKDRGPLLG-QGILASSGPLWVYQRKVIAPELYLERVKGMVKLMVDSTTSIVKSWESRIESEGGI  195 (499)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  195 (499)
                      ++.++...+ ++... .......| .+++..+|+.|+++|+++.+.|+++.++.+.+.+.+.++++++.|.       + 
T Consensus        93 vl~~~~~~~-~~~~~-~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-------~-  162 (463)
T PLN02196         93 VLVTKSHLF-KPTFP-ASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWE-------G-  162 (463)
T ss_pred             HHhCCCCcc-cccCc-hHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCC-------C-
Confidence            998766655 33222 11122344 5788889999999999999999999999999999999999988773       2 


Q ss_pred             eEEehHHHHHHHHHHHHHHHhhCCCCCchhHhHHHHHHHHHHHhccCCCCCcccccCCCcchHHHHHHHHHHHHHHHHHH
Q 047311          196 AEIRVDRYMQSLAADVISRACFGSNYSKGQEIFSKFECLVLAMSKGAVGVPGLRYLPTKNNRDIWKLDKEINSMILQVVK  275 (499)
Q Consensus       196 ~~~dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~l~~~~~~~i~  275 (499)
                      +.+|+.+++..+++++++.++||.+.....+   .+.............+|+  .+|....++..++.+.+.+++.+.++
T Consensus       163 ~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~a~~~~~~~~~~~i~  237 (463)
T PLN02196        163 TQINTYQEMKTYTFNVALLSIFGKDEVLYRE---DLKRCYYILEKGYNSMPI--NLPGTLFHKSMKARKELAQILAKILS  237 (463)
T ss_pred             CeEEeHHHHHHHHHHHHHHHHcCCCCchHHH---HHHHHHHHHhcchhcccc--cCCCccchHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999988643211   111111111111122332  23433345677888899999999998


Q ss_pred             HHhhcCcchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 047311          276 ERSQSCSHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAVYPEWQDRVRAEVL  355 (499)
Q Consensus       276 ~r~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  355 (499)
                      ++.+...+..|+++.+++..  .+         ++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|++
T Consensus       238 ~~~~~~~~~~d~l~~ll~~~--~~---------l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~  306 (463)
T PLN02196        238 KRRQNGSSHNDLLGSFMGDK--EG---------LTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQM  306 (463)
T ss_pred             HHhhcCCCcccHHHHHHhcC--CC---------CCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            88766555678999888531  12         88999999999999999999999999999999999999999999999


Q ss_pred             HHhcc---CCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEeecccccccCCCCcCCCCC
Q 047311          356 RVCKD---RCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQVPIPILQQNPEAWGSDAH  432 (499)
Q Consensus       356 ~~~~~---~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~  432 (499)
                      ++.+.   +..++++++.++|||+|||+|++|++|+++...|.+.+|++++||.|||||.|.++.+++||||++| +||+
T Consensus       307 ~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~-~dP~  385 (463)
T PLN02196        307 AIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIF-SDPG  385 (463)
T ss_pred             HHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhc-CCcC
Confidence            98863   3457999999999999999999999999998889999999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCC
Q 047311          433 EFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNY  492 (499)
Q Consensus       433 ~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~  492 (499)
                      +|+||||++..     .+..++|||.|+|.|+|+++|++|+++++++|+++|+|++.++.
T Consensus       386 ~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  440 (463)
T PLN02196        386 KFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS  440 (463)
T ss_pred             ccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC
Confidence            99999999642     35689999999999999999999999999999999999987663


No 22 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.1e-70  Score=552.45  Aligned_cols=426  Identities=25%  Similarity=0.435  Sum_probs=336.5

Q ss_pred             HHHHHHHHHhcCCCCCCCCcc----------------CccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHH
Q 047311           27 PKKLRALLQKQGVKGPSPLFL----------------WGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRK   90 (499)
Q Consensus        27 ~~~~~~~~~~~~~Pgp~~~p~----------------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (499)
                      +...+..+++.++|||+---+                +||+..+.                      .+.++..+.+|++
T Consensus       105 ~~~~~~~~~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~----------------------~g~~~~~l~~lh~  162 (633)
T PLN02738        105 PATLRNGLAKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVR----------------------GEAFFIPLYELFL  162 (633)
T ss_pred             hHHHHhhhhhCCCCCchHHHHHcccccccccccCccccCcHHHhc----------------------CchHHHHHHHHHH
Confidence            455678889999999973211                24443332                      2467789999999


Q ss_pred             HhCCceEEeecCeeEEEecCHHHHHHHHhcCCCccCCCCccccccCCCCcCceeeccChhHHHHHhhhCCcCcHHHHHhh
Q 047311           91 DYGSRYIYSMGSIQIFCTTDVDLVKEINQCTSLSLGKPSYLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLERVKGM  170 (499)
Q Consensus        91 kyG~i~~~~~~~~~~vvv~d~~~i~~i~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~  170 (499)
                      +|||||++++|+.++++|+||+.+++|+.++...+.+... ........+.++++.+|+.|+.+|+++.+.|+...++.+
T Consensus       163 kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~-~~~~~~~~g~~l~~~dge~wr~rRr~l~p~Fs~~~v~~l  241 (633)
T PLN02738        163 TYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGIL-AEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAM  241 (633)
T ss_pred             HhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcch-HHHHhhccCCceecCCcHHHHHHHHhccHhhhHHHHHHH
Confidence            9999999999999999999999999999976655655322 122223356788888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCc---hhHhHHHHHHHHHHHhc-cC----
Q 047311          171 VKLMVDSTTSIVKSWESRIESEGGIAEIRVDRYMQSLAADVISRACFGSNYSK---GQEIFSKFECLVLAMSK-GA----  242 (499)
Q Consensus       171 ~~~i~~~~~~l~~~l~~~~~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~-~~----  242 (499)
                      .+.+.+.++.++++|.+...  .+ ..+|+.+.+..+++|+++.++||.+++.   ++++...+......... ..    
T Consensus       242 ~~~i~~~v~~L~~~L~~~~~--~g-~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (633)
T PLN02738        242 ISLFGQASDRLCQKLDAAAS--DG-EDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIP  318 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHhc--CC-CcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchh
Confidence            99999999999999976533  34 6899999999999999999999998763   33444444443332221 11    


Q ss_pred             -CCCCcccccCCCcchHHHHHHHHHHHHHHHHHHHHhhc-------------CcchhHHHHHHHHHHhhCCCCCCCCCCC
Q 047311          243 -VGVPGLRYLPTKNNRDIWKLDKEINSMILQVVKERSQS-------------CSHEKDLLQMILEAAKSCGYYNGVPLNI  308 (499)
Q Consensus       243 -~~~p~l~~l~~~~~~~~~~~~~~l~~~~~~~i~~r~~~-------------~~~~~d~l~~ll~~~~~~~~~~~~~~~~  308 (499)
                       ..+|.+..++.. .++..++.+.+.+.+.++++.+++.             .....|+++.|++...  .         
T Consensus       319 ~~~~p~~~~l~~~-~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~~--~---------  386 (633)
T PLN02738        319 VWEIPIWKDISPR-QRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASGD--D---------  386 (633)
T ss_pred             hhhhhHHhhhchH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcCC--C---------
Confidence             112333333322 2334444555555555555432210             0123578988887531  1         


Q ss_pred             CchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCC
Q 047311          309 SRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPP  388 (499)
Q Consensus       309 l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~  388 (499)
                      ++++++.++++.+++||+|||+.+++|++|+|++||++|+||++|+++++++ ..++++++++||||+|||+|+||++|+
T Consensus       387 ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~  465 (633)
T PLN02738        387 VSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQ  465 (633)
T ss_pred             CCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999999999999999999999985 445999999999999999999999999


Q ss_pred             CcccceeeccccccccEEecCCCeEeecccccccCCCCcCCCCCCCCCCCCCCCcc--CCCCCCCcccccCCCCCCCcch
Q 047311          389 AGFVFREALDDIKFKDIVIPKGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVT--AACKFPQAYMPFGAGPRACAGQ  466 (499)
Q Consensus       389 ~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~  466 (499)
                      ++.++|.+.+|.+++||.||+||.|.++.+.+||||++| |||++|+||||+.++.  ........++|||.|+|+|+|+
T Consensus       466 ~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~if-pdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~  544 (633)
T PLN02738        466 PPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHW-DDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGD  544 (633)
T ss_pred             ccccceeeccCceECCEEECCCCEEEecHHHHhCCcccc-CCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCH
Confidence            999889999999999999999999999999999999999 9999999999985321  1123456899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcceEEeCCCC
Q 047311          467 HFALAELKVILSLLLSKFSFSLSPNY  492 (499)
Q Consensus       467 ~lA~~~~~~~l~~ll~~f~i~~~~~~  492 (499)
                      +||++|+++++|+|+++|+|++.++.
T Consensus       545 ~lA~~El~l~LA~Llr~F~~el~~~~  570 (633)
T PLN02738        545 MFASFENVVATAMLVRRFDFQLAPGA  570 (633)
T ss_pred             HHHHHHHHHHHHHHHHhCeeEeCCCC
Confidence            99999999999999999999998764


No 23 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=5e-70  Score=540.12  Aligned_cols=416  Identities=19%  Similarity=0.261  Sum_probs=330.8

Q ss_pred             CCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHHHH
Q 047311           39 VKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKEIN  118 (499)
Q Consensus        39 ~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~i~  118 (499)
                      ||||+++|++||++++..                      .+++.++.+|+++||++|++++|+.++++|+||+++++++
T Consensus         1 ppgp~~lP~iG~l~~~~~----------------------~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il   58 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE----------------------KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAM   58 (466)
T ss_pred             CcCCCCCCccccHHHcCC----------------------CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHH
Confidence            689999999999988853                      1467799999999999999999999999999999999999


Q ss_pred             hcCCCccCCCCccccccCCCCc--Cceeec-cChhHHHHHhhhCC-cCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 047311          119 QCTSLSLGKPSYLSKDRGPLLG--QGILAS-SGPLWVYQRKVIAP-ELYLERVKGMVKLMVDSTTSIVKSWESRIESEGG  194 (499)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~g--~~l~~~-~g~~w~~~R~~l~~-~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  194 (499)
                      .++...|....... ....+.+  .++++. +|+.|+++||.+.+ .|+...++.+.+.+.+.++.+++.+.+......+
T Consensus        59 ~~~~~~f~~r~~~~-~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  137 (466)
T PLN02655         59 VTKFSSISTRKLSK-ALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPH  137 (466)
T ss_pred             HhcCchhcCCChhh-HHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCC
Confidence            97776664322221 1122233  335554 48999999986655 5677778888899999999999988765443233


Q ss_pred             ceEEehHHHHHHHHHHHHHHHhhCCCCCch--hH----------hHHHHHHHHHHHhc--cCCCCCcccccCCCcch-HH
Q 047311          195 IAEIRVDRYMQSLAADVISRACFGSNYSKG--QE----------IFSKFECLVLAMSK--GAVGVPGLRYLPTKNNR-DI  259 (499)
Q Consensus       195 ~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~--~~----------~~~~~~~~~~~~~~--~~~~~p~l~~l~~~~~~-~~  259 (499)
                       +++|+.+.+..+++|+++.++||.+++..  ++          +...+..+......  ....+|.+.+++..... ..
T Consensus       138 -~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~  216 (466)
T PLN02655        138 -SPVNFRDVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRV  216 (466)
T ss_pred             -CceeHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHH
Confidence             67999999999999999999999886531  11          11112222222211  22356766666543222 22


Q ss_pred             HHHHHHHHHHHHHHHHHHhhc---CcchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHH
Q 047311          260 WKLDKEINSMILQVVKERSQS---CSHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWA  336 (499)
Q Consensus       260 ~~~~~~l~~~~~~~i~~r~~~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~  336 (499)
                      .+....+.+++.+.++++++.   .+...|+++.+++...  .         ++++++.+++.++++||+|||+++++|+
T Consensus       217 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~--~---------ls~~~i~~~~~~~~~ag~dtta~~l~~~  285 (466)
T PLN02655        217 QTTEFRRTAVMKALIKQQKKRIARGEERDCYLDFLLSEAT--H---------LTDEQLMMLVWEPIIEAADTTLVTTEWA  285 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHhccC--C---------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            223344556777777766543   2234689999997642  1         8899999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCccc-ceeeccccccccEEecCCCeEee
Q 047311          337 LMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFV-FREALDDIKFKDIVIPKGMGIQV  415 (499)
Q Consensus       337 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~-~R~~~~~~~i~g~~ip~G~~v~~  415 (499)
                      +++|+.||++|+|+++||+++++.+. ++++++.++|||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|.+
T Consensus       286 ~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~  364 (466)
T PLN02655        286 MYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAI  364 (466)
T ss_pred             HHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEe
Confidence            99999999999999999999998655 69999999999999999999999999974 79999999999999999999999


Q ss_pred             cccccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCC
Q 047311          416 PIPILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNY  492 (499)
Q Consensus       416 ~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~  492 (499)
                      +.+++||||++| +||++|+||||+++.. .......++|||+|+|+|||++||..|+++++++||++|+|++.++.
T Consensus       365 ~~~~~~~d~~~~-~~p~~F~PeR~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~  439 (466)
T PLN02655        365 NIYGCNMDKKRW-ENPEEWDPERFLGEKY-ESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGD  439 (466)
T ss_pred             cHHHhcCCcccC-CChhccCccccCCCCc-ccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCC
Confidence            999999999999 9999999999997521 22234689999999999999999999999999999999999997664


No 24 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=5e-68  Score=529.71  Aligned_cols=421  Identities=18%  Similarity=0.234  Sum_probs=319.9

Q ss_pred             CCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcch-hhhHHHHHHHh-CCceEEeecCeeEEEecCHHHHH
Q 047311           38 GVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIA-FAYLDKYRKDY-GSRYIYSMGSIQIFCTTDVDLVK  115 (499)
Q Consensus        38 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ky-G~i~~~~~~~~~~vvv~d~~~i~  115 (499)
                      .||||+++|++||++++...                      .+ ..++.++.++| |+||++++|+.++|+|+||+.++
T Consensus        41 ~PPgp~~~P~iGnl~~l~~~----------------------~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ik   98 (534)
T PLN03018         41 LPPGPPGWPILGNLPELIMT----------------------RPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAR   98 (534)
T ss_pred             CCcCCCCCCeeccHHHhccC----------------------CCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHH
Confidence            58999999999999987430                      11 12455666665 79999999999999999999999


Q ss_pred             HHHhcCCCccCC-CCccccccCCCC--cCceeec-cChhHHHHHhhhCCcCcHH-HHHhhHHHHHHHHHHHHHHHHHHHh
Q 047311          116 EINQCTSLSLGK-PSYLSKDRGPLL--GQGILAS-SGPLWVYQRKVIAPELYLE-RVKGMVKLMVDSTTSIVKSWESRIE  190 (499)
Q Consensus       116 ~i~~~~~~~~~~-~~~~~~~~~~~~--g~~l~~~-~g~~w~~~R~~l~~~~~~~-~l~~~~~~i~~~~~~l~~~l~~~~~  190 (499)
                      +++.+++..+.. +....  ...+.  +.++++. +|+.|+++|+++++.|... ..+.+.+.++.+++++++.+.+...
T Consensus        99 evl~~~~~~f~~rp~~~~--~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  176 (534)
T PLN03018         99 EAFRERDADLADRPQLSI--METIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ  176 (534)
T ss_pred             HHHHhCcHhhcCCCCchh--hhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999977665633 32111  11111  2346655 5999999999999987544 4444555666778899999875432


Q ss_pred             hcCCceEEehHHHHHHHHHHHHHHHhhCCCCCc-------hhHhHHHHHHHHHHHhc---cC------CCCC-cccccCC
Q 047311          191 SEGGIAEIRVDRYMQSLAADVISRACFGSNYSK-------GQEIFSKFECLVLAMSK---GA------VGVP-GLRYLPT  253 (499)
Q Consensus       191 ~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~---~~------~~~p-~l~~l~~  253 (499)
                        .+ .++|+.+.+.++++|+++.++||.++..       +......+.........   ..      ..+| ++.+++.
T Consensus       177 --~~-~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  253 (534)
T PLN03018        177 --RS-ETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNI  253 (534)
T ss_pred             --cC-CceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcc
Confidence              23 5799999999999999999999998632       11111112211121111   00      1122 2221111


Q ss_pred             -CcchHHHHHHHHHHHHHHHHHHHHhhc----Cc--chhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhh
Q 047311          254 -KNNRDIWKLDKEINSMILQVVKERSQS----CS--HEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGH  326 (499)
Q Consensus       254 -~~~~~~~~~~~~l~~~~~~~i~~r~~~----~~--~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~  326 (499)
                       ....+.....+.+.+++.+.++++++.    ..  ...|+++.+++..++++.      ..+++++++.++.++++||+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~ls~~~i~~~~~~~~~aG~  327 (534)
T PLN03018        254 DGQEERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGK------YLVTPDEIKAQCVEFCIAAI  327 (534)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCC------CCCCHHHHHHHHHHHHHHhh
Confidence             112233344566778888888877542    11  246899999976543221      01789999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCccc-ceeeccccccccE
Q 047311          327 ETSAVTSSWALMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFV-FREALDDIKFKDI  405 (499)
Q Consensus       327 ~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~-~R~~~~~~~i~g~  405 (499)
                      |||+.+++|++++|+.||++|+|+++||+++++.+..++.+++.+|||++|||+|+||++|+++.. +|.+.+|++++||
T Consensus       328 dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~  407 (534)
T PLN03018        328 DNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGY  407 (534)
T ss_pred             hHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCE
Confidence            999999999999999999999999999999998766779999999999999999999999999985 6999999999999


Q ss_pred             EecCCCeEeecccccccCCCCcCCCCCCCCCCCCCCCccCC-----CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHH
Q 047311          406 VIPKGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVTAA-----CKFPQAYMPFGAGPRACAGQHFALAELKVILSLL  480 (499)
Q Consensus       406 ~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~l  480 (499)
                      .|||||.|.++.+++||||++| +||++|+||||++.+...     ...+..++|||+|+|.|+|++||.+|+++++++|
T Consensus       408 ~IpkGt~V~~~~~~~~~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~l  486 (534)
T PLN03018        408 FIPKGSHIHVCRPGLGRNPKIW-KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARF  486 (534)
T ss_pred             EECCCCEEEEChHHhcCCcccC-CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            9999999999999999999999 999999999999642211     1235679999999999999999999999999999


Q ss_pred             hhcceEEeCCCC
Q 047311          481 LSKFSFSLSPNY  492 (499)
Q Consensus       481 l~~f~i~~~~~~  492 (499)
                      +++|+|++.++.
T Consensus       487 l~~f~~~~~~~~  498 (534)
T PLN03018        487 LQGFNWKLHQDF  498 (534)
T ss_pred             HHhceEEeCCCC
Confidence            999999987763


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=8e-69  Score=529.88  Aligned_cols=408  Identities=21%  Similarity=0.309  Sum_probs=326.9

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      +.||||.++|++||++.+...                  .+..+++.++.+|+++||+||++++|+.++++++||+++++
T Consensus         7 ~~Ppg~~~~P~iG~~~~l~~~------------------~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~   68 (452)
T PLN03141          7 RLPKGSLGWPVIGETLDFISC------------------AYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKV   68 (452)
T ss_pred             CCCCCCCCCCchhhHHHHHhh------------------cccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhH
Confidence            348899999999999887531                  01125778999999999999999999999999999999999


Q ss_pred             HHhcCCCccCCCCccccccCCCCc-CceeeccChhHHHHHhhhCCcCcHHHHHh-hHHHHHHHHHHHHHHHHHHHhhcCC
Q 047311          117 INQCTSLSLGKPSYLSKDRGPLLG-QGILASSGPLWVYQRKVIAPELYLERVKG-MVKLMVDSTTSIVKSWESRIESEGG  194 (499)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~g~~w~~~R~~l~~~~~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~  194 (499)
                      ++.+++..+... +. .......| .+++..+|+.|+++|+++.+.|+...+.. ..+.+.+.++++++.|.      .+
T Consensus        69 vl~~~~~~~~~~-~~-~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~  140 (452)
T PLN03141         69 VLQSDGNAFVPA-YP-KSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWR------DD  140 (452)
T ss_pred             HHhCCCCeeecc-Cc-hhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhcc------CC
Confidence            999776655421 11 11112334 46888899999999999999998777765 34566666666665542      22


Q ss_pred             ceEEehHHHHHHHHHHHHHHHhhCCCCCch-hHhHHHHHHHHHHHhccCCCCCcccccCCCcchHHHHHHHHHHHHHHHH
Q 047311          195 IAEIRVDRYMQSLAADVISRACFGSNYSKG-QEIFSKFECLVLAMSKGAVGVPGLRYLPTKNNRDIWKLDKEINSMILQV  273 (499)
Q Consensus       195 ~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~l~~~~~~~  273 (499)
                       ..+|+.+.+..+++++++.++||.+.+.. +++...+..+.....    .+|.  ++|.....+..++.+++.+++.+.
T Consensus       141 -~~~~~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~p~~~~~~~~~~~~~l~~~~~~~  213 (452)
T PLN03141        141 -PPVLVQDETKKIAFEVLVKALISLEPGEEMEFLKKEFQEFIKGLM----SLPI--KLPGTRLYRSLQAKKRMVKLVKKI  213 (452)
T ss_pred             -CCEEhHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHhhhHH----hCcc--CCCchHhHHHHHHHHHHHHHHHHH
Confidence             57899999999999999999999876432 222233333332221    2232  233333344556788899999999


Q ss_pred             HHHHhhcCc--------chhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChH
Q 047311          274 VKERSQSCS--------HEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAVYPE  345 (499)
Q Consensus       274 i~~r~~~~~--------~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~  345 (499)
                      ++++++..+        ...|+++.+++... .         .+++++++.++..+++||+|||+.+++|++++|+.||+
T Consensus       214 i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-~---------~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~  283 (452)
T PLN03141        214 IEEKRRAMKNKEEDETGIPKDVVDVLLRDGS-D---------ELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPV  283 (452)
T ss_pred             HHHHHHHHhccCccccCChhhHHHHHHhcCC-C---------CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChH
Confidence            988765431        14689998887531 1         17899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhc----cCCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEeecccccc
Q 047311          346 WQDRVRAEVLRVCK----DRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQVPIPILQ  421 (499)
Q Consensus       346 ~~~~l~~Ei~~~~~----~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~  421 (499)
                      +|+++++|++++++    .+..++.+++.+||||+|||+|++|++|+++.++|.+.+|++++||.||||+.|+++.+++|
T Consensus       284 v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~  363 (452)
T PLN03141        284 ALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVH  363 (452)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhcc
Confidence            99999999998863    23346999999999999999999999999988899999999999999999999999999999


Q ss_pred             cCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCC
Q 047311          422 QNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNY  492 (499)
Q Consensus       422 ~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~  492 (499)
                      |||++| +||++|+||||++++    ..+..++|||+|+|.|+|++||.+|+++++|+|+++|+++++++.
T Consensus       364 ~d~~~~-~dP~~F~PeRfl~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~  429 (452)
T PLN03141        364 LDEENY-DNPYQFNPWRWQEKD----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT  429 (452)
T ss_pred             CCchhc-CCccccCcccccCCC----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC
Confidence            999999 999999999999752    235689999999999999999999999999999999999987763


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=6.5e-68  Score=531.17  Aligned_cols=409  Identities=23%  Similarity=0.317  Sum_probs=328.8

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCC--ceEEeecCeeEEEecCHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGS--RYIYSMGSIQIFCTTDVDLV  114 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~--i~~~~~~~~~~vvv~d~~~i  114 (499)
                      +-||||+++|++||++++...                  ...+++++++.+++++||+  +|++++++.+.++++||+++
T Consensus        42 ~lpPgp~~~PilG~l~~~~~~------------------~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~  103 (490)
T PLN02302         42 PLPPGDLGWPVIGNMWSFLRA------------------FKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEAC  103 (490)
T ss_pred             CCcCCCCCCCccccHHHHHHh------------------cccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHH
Confidence            348999999999999988641                  1123677899999999997  79999999999999999999


Q ss_pred             HHHHhcCCCccCCCCccccccCCCCc-CceeeccChhHHHHHhhhCCcCc-HHHHHhhHHHHHHHHHHHHHHHHHHHhhc
Q 047311          115 KEINQCTSLSLGKPSYLSKDRGPLLG-QGILASSGPLWVYQRKVIAPELY-LERVKGMVKLMVDSTTSIVKSWESRIESE  192 (499)
Q Consensus       115 ~~i~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~g~~w~~~R~~l~~~~~-~~~l~~~~~~i~~~~~~l~~~l~~~~~~~  192 (499)
                      ++++.++. .+.+... ..... ..| .++...+|+.|+++|+++.+.|+ .+.++.+.+.+.+.++++++.|..     
T Consensus       104 ~~vl~~~~-~f~~~~~-~~~~~-~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~-----  175 (490)
T PLN02302        104 KRVLTDDD-AFEPGWP-ESTVE-LIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSK-----  175 (490)
T ss_pred             HHHHcCCC-ccccCCc-hhHHH-HhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence            99998653 3322111 11111 233 34556789999999999999995 788999999999999999988742     


Q ss_pred             CCceEEehHHHHHHHHHHHHHHHhhCCCCCch-hHhHHHHHHHHHHHhccCCCCCcccccCCCcchHHHHHHHHHHHHHH
Q 047311          193 GGIAEIRVDRYMQSLAADVISRACFGSNYSKG-QEIFSKFECLVLAMSKGAVGVPGLRYLPTKNNRDIWKLDKEINSMIL  271 (499)
Q Consensus       193 ~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~l~~~~~  271 (499)
                      .  .++|+.+.+..++++++++++||.+.+.. +.+...+..+...+...    +.  .+|.....+..++.+.+.+++.
T Consensus       176 ~--~~v~~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~p~~~~~~~~~~~~~l~~~~~  247 (490)
T PLN02302        176 M--GEIEFLTELRKLTFKIIMYIFLSSESELVMEALEREYTTLNYGVRAM----AI--NLPGFAYHRALKARKKLVALFQ  247 (490)
T ss_pred             C--CCEehHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHhhhC----Cc--CCCchhhHHHHHHHHHHHHHHH
Confidence            2  46999999999999999999999887542 22222222222111111    11  2232233445567778888888


Q ss_pred             HHHHHHhhcC-----cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHH
Q 047311          272 QVVKERSQSC-----SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAVYPEW  346 (499)
Q Consensus       272 ~~i~~r~~~~-----~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~  346 (499)
                      +.++++++..     ....|+++.+++..++++       ..++++++.+++..+++||+|||+.+++|++++|++||++
T Consensus       248 ~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-------~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~  320 (490)
T PLN02302        248 SIVDERRNSRKQNISPRKKDMLDLLLDAEDENG-------RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEV  320 (490)
T ss_pred             HHHHHHHHhhhccCCCCcCCHHHHHHhhhccCC-------CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHH
Confidence            8888876542     135799999998754322       1278999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccC----CCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEeeccccccc
Q 047311          347 QDRVRAEVLRVCKDR----CLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQVPIPILQQ  422 (499)
Q Consensus       347 ~~~l~~Ei~~~~~~~----~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~  422 (499)
                      |+|+++|+++++++.    ..+++++++++|||+|||+|++|++|+++..+|.+.+|++++||.||||+.|.++.+++||
T Consensus       321 ~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~r  400 (490)
T PLN02302        321 LQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHM  400 (490)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcC
Confidence            999999999998642    2268999999999999999999999999988899999999999999999999999999999


Q ss_pred             CCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCC
Q 047311          423 NPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPN  491 (499)
Q Consensus       423 d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~  491 (499)
                      ||++| +||++|+||||++..    ..+..++|||+|+|.|+|++||.+|+++++++|+++|+|++.++
T Consensus       401 d~~~~-~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  464 (490)
T PLN02302        401 DPEVY-PNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP  464 (490)
T ss_pred             CcccC-CCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC
Confidence            99999 999999999999642    24567999999999999999999999999999999999998644


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.3e-67  Score=518.25  Aligned_cols=410  Identities=21%  Similarity=0.279  Sum_probs=322.9

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHH
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKE  116 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~  116 (499)
                      +-||||.++|++||++++...                 +. ..+++.++.++.++||++|++++++.++++|+||+++++
T Consensus        30 ~lppgp~~~P~iG~~~~~~~~-----------------~~-~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~   91 (472)
T PLN02987         30 RLPPGSLGLPLVGETLQLISA-----------------YK-TENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRF   91 (472)
T ss_pred             CCcCCCcCCCchhhHHHHHhh-----------------cc-cCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHH
Confidence            348899999999999887430                 00 025777899999999999999999999999999999999


Q ss_pred             HHhcCCCccCCCCccccccCCCCc-CceeeccChhHHHHHhhhCCcCcHHHHHhhHH-HHHHHHHHHHHHHHHHHhhcCC
Q 047311          117 INQCTSLSLGKPSYLSKDRGPLLG-QGILASSGPLWVYQRKVIAPELYLERVKGMVK-LMVDSTTSIVKSWESRIESEGG  194 (499)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~  194 (499)
                      ++.++...+.+... .. .....| .++++.+|+.|+++|+++.+.++...+..+.. .+.+.++..++.|        +
T Consensus        92 il~~~~~~f~~~~~-~~-~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--------~  161 (472)
T PLN02987         92 ILQNEGKLFECSYP-GS-ISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSW--------S  161 (472)
T ss_pred             HHhCCCceEEecCc-HH-HHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhh--------c
Confidence            99977666643211 11 112234 67888899999999999876445445544321 1233333333333        1


Q ss_pred             ceEEehHHHHHHHHHHHHHHHhhCCCCCc-hhHhHHHHHHHHHHHhccCCCCCcccccCCCcchHHHHHHHHHHHHHHHH
Q 047311          195 IAEIRVDRYMQSLAADVISRACFGSNYSK-GQEIFSKFECLVLAMSKGAVGVPGLRYLPTKNNRDIWKLDKEINSMILQV  273 (499)
Q Consensus       195 ~~~~dl~~~~~~~~~~vi~~~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~l~~~~~~~  273 (499)
                       +++++.+.+.+++++++++++||.+.+. .+.+...+......+  ....+|++    ....++..++.+++.+++.+.
T Consensus       162 -~~v~~~~~~~~~t~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l----~~~~~~~~~~~~~~~~~~~~~  234 (472)
T PLN02987        162 -SRVLLMEEAKKITFELTVKQLMSFDPGEWTESLRKEYVLVIEGF--FSVPLPLF----STTYRRAIQARTKVAEALTLV  234 (472)
T ss_pred             -cceehHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhh--hcCCCcCC----CchHHHHHHHHHHHHHHHHHH
Confidence             3689999999999999999999987643 222223333222221  11223432    123456777888999999999


Q ss_pred             HHHHhhcC----cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHH
Q 047311          274 VKERSQSC----SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAVYPEWQDR  349 (499)
Q Consensus       274 i~~r~~~~----~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~  349 (499)
                      ++++++..    +..+|+++.+++...  +         ++++++.+++..+++||+|||+.+++|++++|++||++|++
T Consensus       235 i~~r~~~~~~~~~~~~d~l~~ll~~~~--~---------~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~  303 (472)
T PLN02987        235 VMKRRKEEEEGAEKKKDMLAALLASDD--G---------FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQ  303 (472)
T ss_pred             HHHHHhhhhccCcccccHHHHHHhcCC--C---------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHH
Confidence            99887642    135689999997531  2         88999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhc---cCCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEeecccccccCCCC
Q 047311          350 VRAEVLRVCK---DRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQVPIPILQQNPEA  426 (499)
Q Consensus       350 l~~Ei~~~~~---~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~  426 (499)
                      +++|++++.+   ++..++++++.++||++||++|++|++|+++.++|.+.+|++++||.||+||.|.++.+.+||||++
T Consensus       304 l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~  383 (472)
T PLN02987        304 LKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEY  383 (472)
T ss_pred             HHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCccc
Confidence            9999999875   2345689999999999999999999999998889999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCCCc
Q 047311          427 WGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNYQH  494 (499)
Q Consensus       427 ~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~~~  494 (499)
                      | +||++|+||||+++.. .......++|||+|+|.|+|++||.+|+++++++|+++|+|++.++.+.
T Consensus       384 ~-~~p~~F~PeRfl~~~~-~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~  449 (472)
T PLN02987        384 F-KDARTFNPWRWQSNSG-TTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKL  449 (472)
T ss_pred             C-CCccccCcccCCCCCC-CCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCce
Confidence            9 9999999999997522 2223467999999999999999999999999999999999999877664


No 28 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.5e-66  Score=516.40  Aligned_cols=396  Identities=22%  Similarity=0.308  Sum_probs=316.9

Q ss_pred             chhhhHHHHHHHhC-CceEEeecCeeEEEecCHHHHHHHHhcCCCccCCCCccccccCCCCcCceeeccChhHHHHHhhh
Q 047311           80 IAFAYLDKYRKDYG-SRYIYSMGSIQIFCTTDVDLVKEINQCTSLSLGKPSYLSKDRGPLLGQGILASSGPLWVYQRKVI  158 (499)
Q Consensus        80 ~~~~~~~~~~~kyG-~i~~~~~~~~~~vvv~d~~~i~~i~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l  158 (499)
                      +.+.++..+.++++ .+++++..+.  ++++||+.+++++.++...+.++..+........|.|+++++|+.|+++||++
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~~g~~wk~~Rk~l  138 (502)
T PLN02426         61 NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNVDGDSWRFQRKMA  138 (502)
T ss_pred             cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeecCcHHHHHHHHHh
Confidence            33446666778877 5777766554  89999999999999766666665433333334568899999999999999999


Q ss_pred             CCcCcHHHHHhhH--HHHHHHHHHHHHHHHHHHhhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCch------hHhHHH
Q 047311          159 APELYLERVKGMV--KLMVDSTTSIVKSWESRIESEGGIAEIRVDRYMQSLAADVISRACFGSNYSKG------QEIFSK  230 (499)
Q Consensus       159 ~~~~~~~~l~~~~--~~i~~~~~~l~~~l~~~~~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~------~~~~~~  230 (499)
                      ++.|+.+.++.+.  +.+.+.++.+++.+.+..+...+ .++|+.+++..+++|+++.++||.+++..      +++.+.
T Consensus       139 ~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~~~~~~  217 (502)
T PLN02426        139 SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEG-AVLDLQDVFRRFSFDNICKFSFGLDPGCLELSLPISEFADA  217 (502)
T ss_pred             HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-ceEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHH
Confidence            9999999888864  66777788888888765432223 67999999999999999999999987521      234444


Q ss_pred             HHHHHHHHhc-cCCCCCcc----cccCCCcchHHHHHHHHHHHHHHHHHHHHhhcC-cchhHHHHHHHHHHhhCCCCCCC
Q 047311          231 FECLVLAMSK-GAVGVPGL----RYLPTKNNRDIWKLDKEINSMILQVVKERSQSC-SHEKDLLQMILEAAKSCGYYNGV  304 (499)
Q Consensus       231 ~~~~~~~~~~-~~~~~p~l----~~l~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-~~~~d~l~~ll~~~~~~~~~~~~  304 (499)
                      +..+...... ....+|++    .+++....++..++.+.+.+++.+.|+++++.. +...|+++.+++..         
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~dll~~ll~~~---------  288 (502)
T PLN02426        218 FDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFSASKDLLSRFMASI---------  288 (502)
T ss_pred             HHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCcchHHHHHHhcC---------
Confidence            4433222111 11122321    233333345677788899999999999887653 23579999998753         


Q ss_pred             CCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccC-CCCChhhhhcChhHHHHHHhhh
Q 047311          305 PLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAVYPEWQDRVRAEVLRVCKDR-CLLDSTMLSSMKTLTMVIQETL  383 (499)
Q Consensus       305 ~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~l~~l~a~i~E~l  383 (499)
                          .+++++.+++.++++||+|||+.+++|++|+|++||++|+|+++|++++++.+ ..++++++++||||+|||+|+|
T Consensus       289 ----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtL  364 (502)
T PLN02426        289 ----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESM  364 (502)
T ss_pred             ----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHH
Confidence                34788999999999999999999999999999999999999999999998753 3569999999999999999999


Q ss_pred             cCCCCCcccceeecccccc-ccEEecCCCeEeecccccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCC
Q 047311          384 RLYPPAGFVFREALDDIKF-KDIVIPKGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRA  462 (499)
Q Consensus       384 Rl~~~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~  462 (499)
                      |++|++|...|.+.+|.++ +||.||+||.|.++.+++||||++|||||++|+||||++++.....++..++|||+|+|.
T Consensus       365 Rl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~  444 (502)
T PLN02426        365 RLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRV  444 (502)
T ss_pred             hCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCC
Confidence            9999999888999998888 899999999999999999999999999999999999997422122345678999999999


Q ss_pred             CcchHHHHHHHHHHHHHHhhcceEEeCCC
Q 047311          463 CAGQHFALAELKVILSLLLSKFSFSLSPN  491 (499)
Q Consensus       463 C~G~~lA~~~~~~~l~~ll~~f~i~~~~~  491 (499)
                      |+|+++|.+|++++++.|+++|++++.++
T Consensus       445 CiG~~~A~~e~~~~la~ll~~f~~~~~~~  473 (502)
T PLN02426        445 CLGKEMALMEMKSVAVAVVRRFDIEVVGR  473 (502)
T ss_pred             CccHHHHHHHHHHHHHHHHHHceEEEecC
Confidence            99999999999999999999999998644


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.4e-67  Score=477.46  Aligned_cols=415  Identities=24%  Similarity=0.328  Sum_probs=357.2

Q ss_pred             cCCCCCCCC-ccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHH
Q 047311           37 QGVKGPSPL-FLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVK  115 (499)
Q Consensus        37 ~~~Pgp~~~-p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~  115 (499)
                      ..||.-.|| ||+|+...|++                       ++.+++++..+|||+||++.++|+.+.++.+|+...
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk-----------------------~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~   87 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGK-----------------------DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYD   87 (486)
T ss_pred             CCCcccccCcchhhHHHHhcc-----------------------CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhH
Confidence            369999987 99999999988                       999999999999999999999999999999999999


Q ss_pred             HHHhcCCCccCCCCccccccCCCCcCcee-eccChhHHHHHhhhCCcCcHHHHHhhHHHHHHHHHHHHHH-HHHHHhhcC
Q 047311          116 EINQCTSLSLGKPSYLSKDRGPLLGQGIL-ASSGPLWVYQRKVIAPELYLERVKGMVKLMVDSTTSIVKS-WESRIESEG  193 (499)
Q Consensus       116 ~i~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~~g~~w~~~R~~l~~~~~~~~l~~~~~~i~~~~~~l~~~-l~~~~~~~~  193 (499)
                      .++..+....+-..++.....+.+|.|+. ...+....++.+++..++....++++.+.|.+++.+.++. |.+      
T Consensus        88 ~v~~~~~~~ld~~~~~~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~------  161 (486)
T KOG0684|consen   88 FVFKAKLADLDFEEAYSKLTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGE------  161 (486)
T ss_pred             HHHcCcccccCHHHHHHHhhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhccccc------
Confidence            99996645554444454566778888876 3467888899999999999999999999999999988876 322      


Q ss_pred             CceEEehHHHHHHHHHHHHHHHhhCCCCCc-hhHhHHHHHHHHHHHhccCCCCCcccccCCCcchHHHHHHHHHHHHHHH
Q 047311          194 GIAEIRVDRYMQSLAADVISRACFGSNYSK-GQEIFSKFECLVLAMSKGAVGVPGLRYLPTKNNRDIWKLDKEINSMILQ  272 (499)
Q Consensus       194 ~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~l~~~~~~  272 (499)
                      +|.+..+......+++.+.-..+||+.... +++....+.++...+......||.  ++|....+...++++++.+.+..
T Consensus       162 s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~--~LP~~~~r~~~ra~~~i~k~f~~  239 (486)
T KOG0684|consen  162 SGETDGLYTFCRLIIFTASRLLLGGEVRDQLDADVAKLYHDLDQGFQPFDFLFPY--NLPIPLLRRRDRARKKISKIFSK  239 (486)
T ss_pred             ccchhHhhhhhHHHhhhhHHHhhhhhhhhhhcchHHHHHHHHhccccchHhhccc--CCCcchhhhHHHHHHHHHHHHHH
Confidence            225667888888888887777778876655 556666777777776666667786  66776777778999999999999


Q ss_pred             HHHHHhhcCc-chhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHH
Q 047311          273 VVKERSQSCS-HEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSWALMLLAVYPEWQDRVR  351 (499)
Q Consensus       273 ~i~~r~~~~~-~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~  351 (499)
                      .+.+|++..+ ..+|+++.+++ ..+++       ...+++|+.+..+.+++||..||+.|.+|++++|++|||+++.++
T Consensus       240 ~i~~rr~s~s~~~~dmlq~l~~-~y~dg-------~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~  311 (486)
T KOG0684|consen  240 IILDRRASISKWDNDMLQSLME-KYKDG-------RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVR  311 (486)
T ss_pred             HHHHHHhccccccHHHHHHHHH-HhhcC-------CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHH
Confidence            9999998885 56699999999 33333       127899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCC-CChhhhhcChhHHHHHHhhhcCCCCCcccceeecccccccc----EEecCCCeEeecccccccCCCC
Q 047311          352 AEVLRVCKDRCL-LDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFKD----IVIPKGMGIQVPIPILQQNPEA  426 (499)
Q Consensus       352 ~Ei~~~~~~~~~-~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g----~~ip~G~~v~~~~~~~~~d~~~  426 (499)
                      +|+++++|++.. ++.|.+++||.|++||+|||||+||.+.+.|.+.+|.++.+    |.||+|..|.++.+.+|+||++
T Consensus       312 eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~pei  391 (486)
T KOG0684|consen  312 EEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEI  391 (486)
T ss_pred             HHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccc
Confidence            999999986554 89999999999999999999999999989999999999976    9999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCccCCC----CCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCC
Q 047311          427 WGSDAHEFNPERFANGVTAAC----KFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPN  491 (499)
Q Consensus       427 ~g~~p~~F~P~R~~~~~~~~~----~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~  491 (499)
                      | +||+.|+|+||++++....    +-+..++|||+|.|.|||++||.+|+|.++..+|++||+++.+|
T Consensus       392 f-~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~  459 (486)
T KOG0684|consen  392 F-PDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG  459 (486)
T ss_pred             c-CChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC
Confidence            9 9999999999997633221    12345699999999999999999999999999999999999997


No 30 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.2e-66  Score=518.10  Aligned_cols=418  Identities=23%  Similarity=0.362  Sum_probs=333.1

Q ss_pred             CCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHHHHh
Q 047311           40 KGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKEINQ  119 (499)
Q Consensus        40 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~i~~  119 (499)
                      -|-.|||++|+.+++.....                  .+.++..+.+|+++||++|++++|+.++++++||+++++|+.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~   76 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLL------------------GGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLR   76 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHh------------------ccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHH
Confidence            47789999999999877422                  246677999999999999999999999999999999999998


Q ss_pred             cCCCccCCCCccccccCCCCcCceeeccChhHHHHHhhhCCcCcHHHHHhhHH-HHHHHHHHHHHHHHHHHhhcCCceEE
Q 047311          120 CTSLSLGKPSYLSKDRGPLLGQGILASSGPLWVYQRKVIAPELYLERVKGMVK-LMVDSTTSIVKSWESRIESEGGIAEI  198 (499)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~l~~~~~~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~~~~  198 (499)
                      +.+..+.+.... .......|.+++.++|+.|+++|+++++.|+...++.+.+ .+.+.++.+++.|.+...  ++ .++
T Consensus        77 ~~~~~f~~~~~~-~~~~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~--~g-~~v  152 (489)
T PLN02936         77 NYGSKYAKGLVA-EVSEFLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVAL--SG-EAV  152 (489)
T ss_pred             hccccccCcchh-hhhHHHhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CC-Cce
Confidence            665566553222 2222345678888999999999999999999988888755 778899999999986532  33 689


Q ss_pred             ehHHHHHHHHHHHHHHHhhCCCCCc---hhHhHHHHHHHHHHHhc-cCCCCCccc-----ccCCCcchHHHHHHHHHHHH
Q 047311          199 RVDRYMQSLAADVISRACFGSNYSK---GQEIFSKFECLVLAMSK-GAVGVPGLR-----YLPTKNNRDIWKLDKEINSM  269 (499)
Q Consensus       199 dl~~~~~~~~~~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~-~~~~~p~l~-----~l~~~~~~~~~~~~~~l~~~  269 (499)
                      |+.+++..+++|+++.++||.+++.   ++++.+.+......... ....+|.+.     ++ ....++..++.+.+.++
T Consensus       153 d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~-~p~~~~~~~~~~~i~~~  231 (489)
T PLN02936        153 NMEAKFSQLTLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKI-SPRQIKAEKAVTVIRET  231 (489)
T ss_pred             eHHHHHHHHHHHHHHHHHcCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhcc-ChhhHHHHHHHHHHHHH
Confidence            9999999999999999999999863   22334444333332211 122334321     11 11233456667777778


Q ss_pred             HHHHHHHHhhcC--------------cchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhhhhhHHHHHHH
Q 047311          270 ILQVVKERSQSC--------------SHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAGHETSAVTSSW  335 (499)
Q Consensus       270 ~~~~i~~r~~~~--------------~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~  335 (499)
                      +.+.++++++..              ....|+++.|++..+  +         ++.+++.++++++++||+|||+++++|
T Consensus       232 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--~---------~~~~~i~~~~~~~~~aG~dTta~~l~~  300 (489)
T PLN02936        232 VEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE--E---------VSSVQLRDDLLSMLVAGHETTGSVLTW  300 (489)
T ss_pred             HHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhccc--c---------CCHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            877777654310              124678888886532  1         789999999999999999999999999


Q ss_pred             HHHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCccc-ceeeccccccccEEecCCCeEe
Q 047311          336 ALMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFV-FREALDDIKFKDIVIPKGMGIQ  414 (499)
Q Consensus       336 ~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~-~R~~~~~~~i~g~~ip~G~~v~  414 (499)
                      ++|+|++||++|+++++|++++++++ .++++++++||||+|||+||||++|+++.. .|.+.+|+.++||+||+||.|.
T Consensus       301 ~l~~L~~~p~~~~kl~~Ei~~~~~~~-~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~  379 (489)
T PLN02936        301 TLYLLSKNPEALRKAQEELDRVLQGR-PPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIM  379 (489)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHhcCC-CCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEE
Confidence            99999999999999999999998864 459999999999999999999999999874 4555677778999999999999


Q ss_pred             ecccccccCCCCcCCCCCCCCCCCCCCCccC--CCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHhhcceEEeCCCC
Q 047311          415 VPIPILQQNPEAWGSDAHEFNPERFANGVTA--ACKFPQAYMPFGAGPRACAGQHFALAELKVILSLLLSKFSFSLSPNY  492 (499)
Q Consensus       415 ~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~i~~~~~~  492 (499)
                      ++.+++||||++| +||++|+||||+..+..  ....+..++|||.|+|.|+|++||++|+++++++|+++|+++++++.
T Consensus       380 ~~~~~~~rd~~~~-~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~  458 (489)
T PLN02936        380 ISVYNIHRSPEVW-ERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ  458 (489)
T ss_pred             ecHHhccCChhhC-CCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC
Confidence            9999999999999 89999999999964221  11224589999999999999999999999999999999999998765


Q ss_pred             C
Q 047311          493 Q  493 (499)
Q Consensus       493 ~  493 (499)
                      +
T Consensus       459 ~  459 (489)
T PLN02936        459 D  459 (489)
T ss_pred             c
Confidence            4


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2e-60  Score=465.27  Aligned_cols=404  Identities=16%  Similarity=0.204  Sum_probs=301.1

Q ss_pred             cCCCCCCCCccCccHHHHHHHHHHHHHhhhhhcccCcCCCCCcchhhhHHHHHHHhCC-ceEEeecCeeE-------EEe
Q 047311           37 QGVKGPSPLFLWGNIFEIKRIQHQAAAAAKDQQKVGISHNWPPIAFAYLDKYRKDYGS-RYIYSMGSIQI-------FCT  108 (499)
Q Consensus        37 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~-i~~~~~~~~~~-------vvv  108 (499)
                      +.|||+.|||++|+++++.+...                  ..++..++.+.++|||+ ||+++++|.|+       |++
T Consensus        17 ~~PPg~~g~P~iG~~~~~~~~~~------------------~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~   78 (480)
T PLN02648         17 REIPGSYGLPFLGAIKDRLDYFY------------------FQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIAL   78 (480)
T ss_pred             CCCCCCCCCcCcchhhhhhhHHH------------------hcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEE
Confidence            55899999999999998765211                  13567899999999999 99999988655       999


Q ss_pred             cCHHHHHHHHhc----CCCccCCCCccccccCCCCc-C---ceeeccChhHHHHHhhhCCcCcHHHHHhhHHHHHHHHHH
Q 047311          109 TDVDLVKEINQC----TSLSLGKPSYLSKDRGPLLG-Q---GILASSGPLWVYQRKVIAPELYLERVKGMVKLMVDSTTS  180 (499)
Q Consensus       109 ~d~~~i~~i~~~----~~~~~~~~~~~~~~~~~~~g-~---~l~~~~g~~w~~~R~~l~~~~~~~~l~~~~~~i~~~~~~  180 (499)
                      +||++++.+|.+    +...+.. .+. .... +.| .   +++..+|+.|+++|+++.+.|+ ..++.+.+.|.+.+++
T Consensus        79 ~~~e~~~~v~~~~~~~~~~~~~~-~~~-~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~  154 (480)
T PLN02648         79 LDQKSFPVLFDVSKVDKRDVFTG-TYM-PSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAE  154 (480)
T ss_pred             EcCCceeeeecchhcccccccee-eec-cCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHH
Confidence            999999999974    3333322 222 2233 455 4   6677889999999999999999 4778899999999999


Q ss_pred             HHHHHHHHHhhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCchhHhHHHHHHHHHHHhccCCCCCcccccCCCcchHHH
Q 047311          181 IVKSWESRIESEGGIAEIRVDRYMQSLAADVISRACFGSNYSKGQEIFSKFECLVLAMSKGAVGVPGLRYLPTKNNRDIW  260 (499)
Q Consensus       181 l~~~l~~~~~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~  260 (499)
                      +++.|.....  .+ .++|+.+.++.+++|++++++||.+.+. +.+...+..+...... ...+|.....         
T Consensus       155 ~~~~w~~~~~--~~-~~vdv~~~~~~lt~~vi~~~lfG~~~~~-~~l~~~~~~~~~~~~~-~~~~p~~~~~---------  220 (480)
T PLN02648        155 LFDTWEAELA--KK-GKAEFNDPLDQMAFNFLCKALTGKDPSE-TALGSDGPALIQKWLA-LQLAPLASTG---------  220 (480)
T ss_pred             HHHHHHHHHh--hC-CCccccchHHHHHHHHHHHHHcCCCcch-hhhccchhHHHHHHHH-HHhhHHHHcC---------
Confidence            9999965422  23 4699999999999999999999987654 2222222222221110 0011211000         


Q ss_pred             HHHHHHHHHHHHHHHHHhh-c----Ccchh-------HHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHH-HHHhhhh
Q 047311          261 KLDKEINSMILQVVKERSQ-S----CSHEK-------DLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKN-IYFAGHE  327 (499)
Q Consensus       261 ~~~~~l~~~~~~~i~~r~~-~----~~~~~-------d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~-~~~aG~~  327 (499)
                           +...+++.+.++.. .    .....       +.++.+++...+.+         +++++++++++. +.++|++
T Consensus       221 -----l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~---------l~~~ei~~~~l~~~~~~t~~  286 (480)
T PLN02648        221 -----LPHVLEELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEKFG---------ISREEALHNLLFVLGFNAFG  286 (480)
T ss_pred             -----chHHHHHHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHhcC---------CCHHHHHHHHHHHHHHHhhH
Confidence                 00111111111100 0    00011       12234444433333         889999999875 4467778


Q ss_pred             hHHHHHHHHHHHHhcChH-HHHHHHHHHHHHhcc-CCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeeccccccc--
Q 047311          328 TSAVTSSWALMLLAVYPE-WQDRVRAEVLRVCKD-RCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALDDIKFK--  403 (499)
Q Consensus       328 tt~~~l~~~l~~L~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~--  403 (499)
                      ||+++++|++|+|++||+ +|++|++|++++++. +..++++++.+||||++||+|+||++|+++...|.+.+|++++  
T Consensus       287 ~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~  366 (480)
T PLN02648        287 GFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESH  366 (480)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecC
Confidence            888899999999999995 999999999999863 4457999999999999999999999999999889999999996  


Q ss_pred             --cEEecCCCeEeecccccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCccccc---------CCCCCCCcchHHHHHH
Q 047311          404 --DIVIPKGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPF---------GAGPRACAGQHFALAE  472 (499)
Q Consensus       404 --g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~F---------g~G~r~C~G~~lA~~~  472 (499)
                        ||.||||+.|.++.+.+||||++| +||++|+|+||++.+..   ....+++|         |+|+|.|+|++||++|
T Consensus       367 ~~g~~IpkG~~V~~~~~~~hrdp~~~-~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e  442 (480)
T PLN02648        367 DAAFEIKKGEMLFGYQPLVTRDPKVF-DRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLV  442 (480)
T ss_pred             CceEEECCCCEEEEChHHHhCCcccC-CCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHH
Confidence              799999999999999999999999 99999999999864221   11234444         6778999999999999


Q ss_pred             HHHHHHHHhhcce-EEeCCCCCc
Q 047311          473 LKVILSLLLSKFS-FSLSPNYQH  494 (499)
Q Consensus       473 ~~~~l~~ll~~f~-i~~~~~~~~  494 (499)
                      +++++++|+++|+ |++.+|...
T Consensus       443 ~~~~la~Ll~~f~~~~l~~~~~~  465 (480)
T PLN02648        443 ARLFVAELFLRYDSFEIEVDTSG  465 (480)
T ss_pred             HHHHHHHHHHHhCEEeecCCccc
Confidence            9999999999998 999888764


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=4.2e-54  Score=416.04  Aligned_cols=356  Identities=28%  Similarity=0.457  Sum_probs=297.9

Q ss_pred             hHHHHHHHhCCceEEeecCee--EEEecCHHHHHHHHhcCCCc--cCCCCccccccCCCCcCc-eeeccChhHHHHHhhh
Q 047311           84 YLDKYRKDYGSRYIYSMGSIQ--IFCTTDVDLVKEINQCTSLS--LGKPSYLSKDRGPLLGQG-ILASSGPLWVYQRKVI  158 (499)
Q Consensus        84 ~~~~~~~kyG~i~~~~~~~~~--~vvv~d~~~i~~i~~~~~~~--~~~~~~~~~~~~~~~g~~-l~~~~g~~w~~~R~~l  158 (499)
                      ....+.+.||.+++....+..  ++++++++.+++++.++...  ...............|.+ +++.+|+.|+++|+++
T Consensus        27 ~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl~  106 (411)
T COG2124          27 FLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLL  106 (411)
T ss_pred             hHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHHHHHHh
Confidence            456677889998888766654  79999999999999976411  111111121133455655 7889999999999999


Q ss_pred             CCcCcHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCceEEehHHHHHHHHHHHHHHHhhCCCCCchhHhHHHHHHHHHHH
Q 047311          159 APELYLERVKGMVKLMVDSTTSIVKSWESRIESEGGIAEIRVDRYMQSLAADVISRACFGSNYSKGQEIFSKFECLVLAM  238 (499)
Q Consensus       159 ~~~~~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~  238 (499)
                      +++|+++.++++.+.+.+.++++++.+ .     .+ ..+++.+....++.++++ .+||...++...............
T Consensus       107 ~~~F~~~~~~~~~~~i~~~~~~~~~~~-~-----~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~~  178 (411)
T COG2124         107 APAFTPRALRGYRPLIREIADRLLDDL-W-----QG-GADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLRL  178 (411)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHhc-c-----cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999988 2     22 578899999999999999 999998876555554443333321


Q ss_pred             hccCCCCCcccccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHH
Q 047311          239 SKGAVGVPGLRYLPTKNNRDIWKLDKEINSMILQVVKERSQSCSHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNC  318 (499)
Q Consensus       239 ~~~~~~~p~l~~l~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~  318 (499)
                            .|.  ..+.....+..++.+++.+++.++|++|+...  .+|+++.++...++++.       .+|++|+.+++
T Consensus       179 ------~~~--~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~~--~~dlls~l~~a~~~~~~-------~lsd~Ei~~~~  241 (411)
T COG2124         179 ------DPD--LGPEEPWRRARAARRELDAYLRALIAERRAAP--RDDLLSLLLSAEDDGGG-------RLSDDEIRDEL  241 (411)
T ss_pred             ------Ccc--cCCcccHHHHHHHHHHHHHHHHHHHHHhccCC--cccHHHHHHHHhhCCCC-------cCCHHHHHHHH
Confidence                  011  11222355678889999999999999999544  88999999998876541       28999999999


Q ss_pred             HHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHhhhcCCCCCcccceeecc
Q 047311          319 KNIYFAGHETSAVTSSWALMLLAVYPEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQETLRLYPPAGFVFREALD  398 (499)
Q Consensus       319 ~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~R~~~~  398 (499)
                      +++++||+|||+++|+|++|.|++||++++++++|.+.                ||++++++|+||++||++.+.|.+.+
T Consensus       242 ~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~~~R~~~~  305 (411)
T COG2124         242 ITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPLARRVATE  305 (411)
T ss_pred             HHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhccceeccC
Confidence            99999999999999999999999999999999998554                89999999999999999998899999


Q ss_pred             ccccccEEecCCCeEeecccccccCCCCcCCCCCCCCCCCCCCCccCCCCCCCcccccCCCCCCCcchHHHHHHHHHHHH
Q 047311          399 DIKFKDIVIPKGMGIQVPIPILQQNPEAWGSDAHEFNPERFANGVTAACKFPQAYMPFGAGPRACAGQHFALAELKVILS  478 (499)
Q Consensus       399 ~~~i~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~  478 (499)
                      |++++|+.||+|+.|.++++++||||+.| +||++|+|+||.          ..++|||+|+|.|+|..||++|++++++
T Consensus       306 d~~igg~~Ip~G~~V~~~~~~anrDp~~f-~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~  374 (411)
T COG2124         306 DVELGGYRIPAGTVVLLSIGAANRDPEVF-PDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALA  374 (411)
T ss_pred             CEeeCCEEeCCCCEEEecHhhhcCChhhC-CChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999 999999999997          3599999999999999999999999999


Q ss_pred             HHhhcceEEeCCC
Q 047311          479 LLLSKFSFSLSPN  491 (499)
Q Consensus       479 ~ll~~f~i~~~~~  491 (499)
                      .++++|++....+
T Consensus       375 ~ll~r~~~~~~~~  387 (411)
T COG2124         375 ELLRRFPLLLLAE  387 (411)
T ss_pred             HHHHhCchhhcCC
Confidence            9999999877665


No 33 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=62.46  E-value=11  Score=29.32  Aligned_cols=21  Identities=14%  Similarity=0.162  Sum_probs=10.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH
Q 047311            3 VVLGGVVLVVLFLLQHMYNAL   23 (499)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~   23 (499)
                      .+.++++++++.+++++++++
T Consensus        68 ~Ii~gv~aGvIg~Illi~y~i   88 (122)
T PF01102_consen   68 GIIFGVMAGVIGIILLISYCI   88 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             ehhHHHHHHHHHHHHHHHHHH
Confidence            445555555554444444444


No 34 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=57.96  E-value=13  Score=36.13  Aligned_cols=44  Identities=9%  Similarity=0.037  Sum_probs=22.6

Q ss_pred             hHHHHHH-HhCCceEEeecCeeEE-EecCHHHHHHHHhcCCCccCCC
Q 047311           84 YLDKYRK-DYGSRYIYSMGSIQIF-CTTDVDLVKEINQCTSLSLGKP  128 (499)
Q Consensus        84 ~~~~~~~-kyG~i~~~~~~~~~~v-vv~d~~~i~~i~~~~~~~~~~~  128 (499)
                      .++-..+ +||.|+.-.+.++.+- =+..++..+. +.+....|+-|
T Consensus       214 l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs-~~~Ek~Iy~lp  259 (534)
T KOG3653|consen  214 LLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQS-FQNEKNIYSLP  259 (534)
T ss_pred             hHHHhhcCccceeehhhccCceeEEEecCHHHHHH-HHhHHHHHhcc
Confidence            3444444 7899988877765543 3334444333 33333334333


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=57.33  E-value=4  Score=34.99  Aligned_cols=44  Identities=27%  Similarity=0.337  Sum_probs=32.7

Q ss_pred             cChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEee
Q 047311          371 SMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQV  415 (499)
Q Consensus       371 ~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~  415 (499)
                      .-..+.|||.|+.-+..-.. +.=+..+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~-vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSR-VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCE-EEEEEcCceEECCEEeCCCCEEEE
Confidence            34568899999987654322 333346899999999999998876


No 36 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=54.27  E-value=20  Score=27.25  Aligned_cols=11  Identities=18%  Similarity=-0.037  Sum_probs=7.9

Q ss_pred             CCccCccHHHH
Q 047311           44 PLFLWGNIFEI   54 (499)
Q Consensus        44 ~~p~~G~~~~~   54 (499)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            35999997644


No 37 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=51.57  E-value=15  Score=29.25  Aligned_cols=7  Identities=14%  Similarity=0.543  Sum_probs=3.2

Q ss_pred             ccCccHH
Q 047311           46 FLWGNIF   52 (499)
Q Consensus        46 p~~G~~~   52 (499)
                      |+-|+.+
T Consensus        33 P~~gt~w   39 (130)
T PF12273_consen   33 PIYGTRW   39 (130)
T ss_pred             CcCCcee
Confidence            4445443


No 38 
>PHA02902 putative IMV membrane protein; Provisional
Probab=48.87  E-value=39  Score=22.51  Aligned_cols=25  Identities=8%  Similarity=0.032  Sum_probs=12.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhH
Q 047311            3 VVLGGVVLVVLFLLQHMYNALVLKP   27 (499)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~   27 (499)
                      +=.+++.++++++++++.+..|.+.
T Consensus         3 ~dtfvi~~v~v~Ivclliya~YrR~   27 (70)
T PHA02902          3 IDTFVILAVIVIIFCLLIYAAYKRY   27 (70)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            3344555555555555555554433


No 39 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=46.81  E-value=58  Score=25.75  Aligned_cols=44  Identities=16%  Similarity=0.314  Sum_probs=34.6

Q ss_pred             CCCCcchhhhHHHHHHHhCCceEEeecCeeEEEecCHHHHHHHHhc
Q 047311           75 HNWPPIAFAYLDKYRKDYGSRYIYSMGSIQIFCTTDVDLVKEINQC  120 (499)
Q Consensus        75 ~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~d~~~i~~i~~~  120 (499)
                      +..+++....+++|.++||.+--.  .+..++...|++.++++...
T Consensus        70 ~~lP~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~  113 (129)
T PF13625_consen   70 NPLPQNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLAD  113 (129)
T ss_pred             CCCCHHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhC
Confidence            555678888999999999997542  24567788899999999874


No 40 
>PRK06789 flagellar motor switch protein; Validated
Probab=43.20  E-value=24  Score=24.74  Aligned_cols=39  Identities=10%  Similarity=0.165  Sum_probs=30.4

Q ss_pred             HHHhhhcCCCCCcc-cceeeccccc--cccEEecCCCeEeec
Q 047311          378 VIQETLRLYPPAGF-VFREALDDIK--FKDIVIPKGMGIQVP  416 (499)
Q Consensus       378 ~i~E~lRl~~~~~~-~~R~~~~~~~--i~g~~ip~G~~v~~~  416 (499)
                      -++|-+.+.+-... +-|.+.+++.  ++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            46788999887554 6677766554  489999999999986


No 41 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=42.22  E-value=19  Score=23.93  Aligned_cols=8  Identities=38%  Similarity=0.771  Sum_probs=6.2

Q ss_pred             CCCCCCCC
Q 047311          435 NPERFANG  442 (499)
Q Consensus       435 ~P~R~~~~  442 (499)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78899864


No 42 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=41.61  E-value=83  Score=19.92  Aligned_cols=42  Identities=17%  Similarity=0.176  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHHHHH
Q 047311          313 FIVDNCKNIYFAGHETSAVTSSWALMLLAVYPEWQDRVRAEV  354 (499)
Q Consensus       313 ~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  354 (499)
                      ++...+..++-.|.|..+-.+.-.|.+.--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            445556666666777777777777777777888888877775


No 43 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=41.19  E-value=19  Score=24.41  Aligned_cols=15  Identities=27%  Similarity=0.448  Sum_probs=12.3

Q ss_pred             ChhHHHHHHhhhcCC
Q 047311          372 MKTLTMVIQETLRLY  386 (499)
Q Consensus       372 l~~l~a~i~E~lRl~  386 (499)
                      .-+++.+|+|++|+-
T Consensus        40 ~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   40 KQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            357999999999963


No 44 
>PRK04989 psbM photosystem II reaction center protein M; Provisional
Probab=40.49  E-value=71  Score=18.49  Aligned_cols=25  Identities=32%  Similarity=0.333  Sum_probs=16.1

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHh
Q 047311            1 MAVVLGGVVLVVLFLLQHMYNALVL   25 (499)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~   25 (499)
                      |++..++.++.++++++-...++..
T Consensus         1 MevN~lgfiAt~Lfi~iPt~FLlil   25 (35)
T PRK04989          1 MEVNDLGFVASLLFVLVPTVFLIIL   25 (35)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHH
Confidence            6777777777777666655554443


No 45 
>TIGR03038 PS_II_psbM photosystem II reaction center protein PsbM. Members of this protein family are the photosystem II reaction center M protein, product of the psbM gene, in Cyanobacteria and their derived organelles in plants. This model resembles Pfam model pfam05151 but has cutoffs set to avoid false-positive matches to similar (not necessarily homologous) sequences in species that are not photosynthetic.
Probab=39.75  E-value=72  Score=18.19  Aligned_cols=25  Identities=32%  Similarity=0.462  Sum_probs=15.8

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHh
Q 047311            1 MAVVLGGVVLVVLFLLQHMYNALVL   25 (499)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~   25 (499)
                      |++..++.++.++++++-...++..
T Consensus         1 MEvn~l~fiAt~Lfi~iPt~FLiil   25 (33)
T TIGR03038         1 MEVNILGFIATLLFILVPTVFLLIL   25 (33)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHH
Confidence            6777777777776666555554433


No 46 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=39.71  E-value=28  Score=22.88  Aligned_cols=19  Identities=16%  Similarity=0.209  Sum_probs=16.4

Q ss_pred             HHHHHHhcChHHHHHHHHH
Q 047311          335 WALMLLAVYPEWQDRVRAE  353 (499)
Q Consensus       335 ~~l~~L~~~p~~~~~l~~E  353 (499)
                      -++.+|..||++.++|.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            4678999999999999874


No 47 
>CHL00080 psbM photosystem II protein M
Probab=36.10  E-value=86  Score=17.97  Aligned_cols=25  Identities=24%  Similarity=0.328  Sum_probs=15.8

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHh
Q 047311            1 MAVVLGGVVLVVLFLLQHMYNALVL   25 (499)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~   25 (499)
                      |++..++.++.++++++-...++..
T Consensus         1 MEvN~lgfiAt~LFi~iPt~FLlil   25 (34)
T CHL00080          1 MEVNILAFIATALFILVPTAFLLII   25 (34)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHh
Confidence            6677777777666666655554433


No 48 
>PF05151 PsbM:  Photosystem II reaction centre M protein (PsbM);  InterPro: IPR007826 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection [].  This family represents the low molecular weight transmembrane protein PsbM found in PSII. PsbM is one of the most hydrophobic proteins in the thylakoid membrane. The function of this protein is unknown.; GO: 0015979 photosynthesis, 0019684 photosynthesis, light reaction, 0009523 photosystem II, 0016021 integral to membrane; PDB: 3A0H_m 3ARC_m 3A0B_M 3PRR_M 3PRQ_M 1S5L_M 4FBY_e 3BZ2_M 3BZ1_M 2AXT_M ....
Probab=35.55  E-value=85  Score=17.66  Aligned_cols=23  Identities=22%  Similarity=0.248  Sum_probs=11.2

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHH
Q 047311            1 MAVVLGGVVLVVLFLLQHMYNAL   23 (499)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~   23 (499)
                      |++..++.++.++++++-...++
T Consensus         1 Mevn~l~fiAtaLfi~iPt~FLi   23 (31)
T PF05151_consen    1 MEVNILAFIATALFILIPTAFLI   23 (31)
T ss_dssp             B---TTHHHHHHHHHHHHHHHHH
T ss_pred             CccchhhHHHHHHHHHHHHHHHh
Confidence            56666666666665555444443


No 49 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=34.63  E-value=18  Score=23.23  Aligned_cols=11  Identities=45%  Similarity=1.053  Sum_probs=9.1

Q ss_pred             cccCCCCCCCc
Q 047311          454 MPFGAGPRACA  464 (499)
Q Consensus       454 ~~Fg~G~r~C~  464 (499)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999999984


No 50 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=33.14  E-value=51  Score=26.72  Aligned_cols=40  Identities=18%  Similarity=0.481  Sum_probs=30.6

Q ss_pred             ccccccccEEecCCCeEeecccc-------cccCCCCcCCCCCCCCCCC
Q 047311          397 LDDIKFKDIVIPKGMGIQVPIPI-------LQQNPEAWGSDAHEFNPER  438 (499)
Q Consensus       397 ~~~~~i~g~~ip~G~~v~~~~~~-------~~~d~~~~g~~p~~F~P~R  438 (499)
                      .+|+.|+|..||+|+.-+..+..       +|.+.+.||-  ..|+|+.
T Consensus        53 ~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~--~~Y~~~~   99 (145)
T PF11138_consen   53 SKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA--YNYDPSK   99 (145)
T ss_pred             CCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc--cccCchh
Confidence            47999999999999988776543       5778888873  5666665


No 51 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=32.98  E-value=31  Score=24.87  Aligned_cols=21  Identities=19%  Similarity=0.401  Sum_probs=18.2

Q ss_pred             HHHHHHHHHHhhcceEEeCCC
Q 047311          471 AELKVILSLLLSKFSFSLSPN  491 (499)
Q Consensus       471 ~~~~~~l~~ll~~f~i~~~~~  491 (499)
                      ..|+-++..+|+-|||.+.|-
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            358899999999999999875


No 52 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=32.94  E-value=98  Score=22.29  Aligned_cols=8  Identities=25%  Similarity=0.139  Sum_probs=5.2

Q ss_pred             CCCCccCc
Q 047311           42 PSPLFLWG   49 (499)
Q Consensus        42 p~~~p~~G   49 (499)
                      |-.-|+||
T Consensus        64 PIYrPvI~   71 (94)
T PF05393_consen   64 PIYRPVIG   71 (94)
T ss_pred             Cccccccc
Confidence            33568888


No 53 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=32.90  E-value=14  Score=35.64  Aligned_cols=45  Identities=27%  Similarity=0.326  Sum_probs=32.9

Q ss_pred             cChhHHHHHHhhhcCCCCCcccceeeccccccccEEecCCCeEeec
Q 047311          371 SMKTLTMVIQETLRLYPPAGFVFREALDDIKFKDIVIPKGMGIQVP  416 (499)
Q Consensus       371 ~l~~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~  416 (499)
                      .-..+.|||.|+.-+.--.. +-=+..+|+.++|..||+||.|.-.
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~-vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSA-VKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEecCCE-EEEEEcCceeeCCEEecCCCEEEEE
Confidence            34568899999887654322 3333468999999999999988754


No 54 
>PRK14094 psbM photosystem II reaction center protein M; Provisional
Probab=32.72  E-value=70  Score=19.83  Aligned_cols=26  Identities=23%  Similarity=0.082  Sum_probs=17.2

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHhh
Q 047311            1 MAVVLGGVVLVVLFLLQHMYNALVLK   26 (499)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~   26 (499)
                      |++..++.++.++++++-...++..+
T Consensus         1 MEVN~lgfiAtaLFi~iPT~FLlilY   26 (50)
T PRK14094          1 METTNFGFVASLLFVGVPTIFLIGLF   26 (50)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhee
Confidence            77777777777777666655554443


No 55 
>PF11395 DUF2873:  Protein of unknown function (DUF2873);  InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins.
Probab=30.90  E-value=1.1e+02  Score=17.73  Aligned_cols=25  Identities=16%  Similarity=0.125  Sum_probs=14.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHH
Q 047311            4 VLGGVVLVVLFLLQHMYNALVLKPK   28 (499)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~   28 (499)
                      +.+.+.+.++++++++.+.+|+...
T Consensus         9 fylc~l~~llflv~imliif~f~le   33 (43)
T PF11395_consen    9 FYLCFLSFLLFLVIIMLIIFWFSLE   33 (43)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3445555666666666666666543


No 56 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=29.02  E-value=91  Score=22.61  Aligned_cols=18  Identities=28%  Similarity=0.656  Sum_probs=15.3

Q ss_pred             ChHHHHHHHHHHHHHhcc
Q 047311          343 YPEWQDRVRAEVLRVCKD  360 (499)
Q Consensus       343 ~p~~~~~l~~Ei~~~~~~  360 (499)
                      .|++...+|+||-+|+..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            389999999999998754


No 57 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=27.03  E-value=71  Score=26.21  Aligned_cols=39  Identities=13%  Similarity=-0.020  Sum_probs=29.7

Q ss_pred             CCcchhhhHHHHHHHhC-CceEEeecCe-e---EEEecCHHHHH
Q 047311           77 WPPIAFAYLDKYRKDYG-SRYIYSMGSI-Q---IFCTTDVDLVK  115 (499)
Q Consensus        77 ~~~~~~~~~~~~~~kyG-~i~~~~~~~~-~---~vvv~d~~~i~  115 (499)
                      +.+...+..+++++++| ++.++++.|. |   -++++||-.+-
T Consensus       152 MGGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAG  195 (218)
T COG1707         152 MGGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAG  195 (218)
T ss_pred             ccchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhh
Confidence            34788889999999999 8999987653 2   27788876543


No 58 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=26.42  E-value=1.3e+02  Score=19.11  Aligned_cols=34  Identities=9%  Similarity=0.013  Sum_probs=24.1

Q ss_pred             HHHHHHhCCceEEeecC----eeEEEecCHHHHHHHHh
Q 047311           86 DKYRKDYGSRYIYSMGS----IQIFCTTDVDLVKEINQ  119 (499)
Q Consensus        86 ~~~~~kyG~i~~~~~~~----~~~vvv~d~~~i~~i~~  119 (499)
                      .++.++||+|-.+.+..    .-+|-..+.+.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            46778999998876543    34566778888888766


No 59 
>PRK00400 hisE phosphoribosyl-ATP pyrophosphatase; Validated
Probab=26.28  E-value=2.9e+02  Score=20.98  Aligned_cols=79  Identities=20%  Similarity=0.111  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHhhcCcchhHHHHHHHHHHhhCCCCCCCCCCCCchHHHHHHHHHHHHhh----hhh----HHHHHHHHHHH
Q 047311          268 SMILQVVKERSQSCSHEKDLLQMILEAAKSCGYYNGVPLNISRDKFIVDNCKNIYFAG----HET----SAVTSSWALML  339 (499)
Q Consensus       268 ~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG----~~t----t~~~l~~~l~~  339 (499)
                      .-+.+.|.+|++.. .+.++...|++.....           -.+-+......++.|.    -+.    ++-.+.+++..
T Consensus         6 ~~L~~~I~~Rk~~~-~~~SYT~~L~~~G~~k-----------i~kKlgEEa~E~i~A~~~~d~~~~i~E~ADLlYHllVl   73 (105)
T PRK00400          6 ERLAATIEERKGAD-PEGSYTAKLLDKGLDK-----------ILKKVGEEATEVVIAAKDGDREELVYEIADLLYHLLVL   73 (105)
T ss_pred             HHHHHHHHHHHhCC-CCCcHHHHHHHCCHHH-----------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence            34556666776543 4678888888743221           1223333344444443    222    33344455555


Q ss_pred             HhcChHHHHHHHHHHHHHh
Q 047311          340 LAVYPEWQDRVRAEVLRVC  358 (499)
Q Consensus       340 L~~~p~~~~~l~~Ei~~~~  358 (499)
                      |..+---.+.+.+|+.+=.
T Consensus        74 L~~~gv~~~dV~~eL~~R~   92 (105)
T PRK00400         74 LAARGISLEDVLAELERRE   92 (105)
T ss_pred             HHHcCCCHHHHHHHHHHHc
Confidence            5555444455666665543


No 60 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=25.37  E-value=56  Score=25.88  Aligned_cols=23  Identities=22%  Similarity=0.590  Sum_probs=16.7

Q ss_pred             CCCcchHHHHHHHHHHHHHHhhc
Q 047311          461 RACAGQHFALAELKVILSLLLSK  483 (499)
Q Consensus       461 r~C~G~~lA~~~~~~~l~~ll~~  483 (499)
                      -.|.|+.||+.++-.++.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            37999999999999999999864


No 61 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=24.31  E-value=1.5e+02  Score=19.04  Aligned_cols=27  Identities=11%  Similarity=-0.073  Sum_probs=11.5

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHhhH
Q 047311            1 MAVVLGGVVLVVLFLLQHMYNALVLKP   27 (499)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~   27 (499)
                      |.++.+.+.+.+++.++.++.++|..+
T Consensus         1 M~il~~LIpiSl~l~~~~l~~f~Wavk   27 (51)
T TIGR00847         1 MEILTILIPISLLLGGVGLVAFLWSLK   27 (51)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            344444333333434444444544433


No 62 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=23.53  E-value=1.3e+02  Score=23.62  Aligned_cols=18  Identities=6%  Similarity=-0.227  Sum_probs=7.1

Q ss_pred             HHHHHHHHHHHHHHHHhh
Q 047311            9 VLVVLFLLQHMYNALVLK   26 (499)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~   26 (499)
                      +.+++-++..++++.|+.
T Consensus        71 ~gv~aGvIg~Illi~y~i   88 (122)
T PF01102_consen   71 FGVMAGVIGIILLISYCI   88 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            334443344443333333


No 63 
>PHA01346 hypothetical protein
Probab=23.30  E-value=64  Score=19.38  Aligned_cols=19  Identities=21%  Similarity=0.382  Sum_probs=14.8

Q ss_pred             hcChH-HHHHHHHHHHHHhc
Q 047311          341 AVYPE-WQDRVRAEVLRVCK  359 (499)
Q Consensus       341 ~~~p~-~~~~l~~Ei~~~~~  359 (499)
                      ..+|+ -|+++.+|+++.+.
T Consensus        27 vsdpdfsqekihaeldsllr   46 (53)
T PHA01346         27 VSDPDFSQEKIHAELDSLLR   46 (53)
T ss_pred             cCCCCccHHHHHHHHHHHHH
Confidence            46777 68899999988753


No 64 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=23.30  E-value=1.2e+02  Score=18.10  Aligned_cols=16  Identities=38%  Similarity=0.490  Sum_probs=11.0

Q ss_pred             HHHHh-cChHHHHHHHH
Q 047311          337 LMLLA-VYPEWQDRVRA  352 (499)
Q Consensus       337 l~~L~-~~p~~~~~l~~  352 (499)
                      +..++ +||++++.++.
T Consensus        19 L~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   19 LQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHhChhHHHHHHh
Confidence            33444 79999887764


No 65 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=22.92  E-value=50  Score=28.59  Aligned_cols=24  Identities=25%  Similarity=0.462  Sum_probs=19.5

Q ss_pred             eeccccc-ccCCCCcCCCCCCCCCCC
Q 047311          414 QVPIPIL-QQNPEAWGSDAHEFNPER  438 (499)
Q Consensus       414 ~~~~~~~-~~d~~~~g~~p~~F~P~R  438 (499)
                      .++-|.- |.|+.+| .|...|+|-|
T Consensus       187 GiPGW~~~n~~~~FY-~d~~~FRp~R  211 (212)
T PF11227_consen  187 GIPGWWPDNEDPAFY-DDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCCCCCcccc-cCccccCCCC
Confidence            3444454 9999999 9999999988


No 66 
>PRK05933 type III secretion system protein; Validated
Probab=22.11  E-value=79  Score=29.25  Aligned_cols=43  Identities=19%  Similarity=0.155  Sum_probs=33.3

Q ss_pred             hHHHHHHhhhcCCCCCcc-cceee-cc--ccccccEEecCCCeEeec
Q 047311          374 TLTMVIQETLRLYPPAGF-VFREA-LD--DIKFKDIVIPKGMGIQVP  416 (499)
Q Consensus       374 ~l~a~i~E~lRl~~~~~~-~~R~~-~~--~~~i~g~~ip~G~~v~~~  416 (499)
                      -+..-|+|.++|.+.... +-|.+ .+  |+.++|..|.+|.+|.++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            356678999999987655 43554 34  566699999999999987


No 67 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=22.05  E-value=33  Score=28.45  Aligned_cols=35  Identities=31%  Similarity=0.503  Sum_probs=24.8

Q ss_pred             CCCCCCCCCCccCCCCCCCcccccCCCCCCCcchH
Q 047311          433 EFNPERFANGVTAACKFPQAYMPFGAGPRACAGQH  467 (499)
Q Consensus       433 ~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  467 (499)
                      +|+|++|-.---....++...+-|..|.=.|-|..
T Consensus        36 eYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          36 EYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             ccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            67888886421112235678899999999999864


No 68 
>PF10264 Stork_head:  Winged helix Storkhead-box1 domain;  InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=21.56  E-value=2.8e+02  Score=19.89  Aligned_cols=48  Identities=19%  Similarity=0.302  Sum_probs=29.5

Q ss_pred             HHHHHHHHHhcC--hHHHHHHHHHHHHHhccCCCCChhhhhcChhHHHHHHh
Q 047311          332 TSSWALMLLAVY--PEWQDRVRAEVLRVCKDRCLLDSTMLSSMKTLTMVIQE  381 (499)
Q Consensus       332 ~l~~~l~~L~~~--p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E  381 (499)
                      ++.|++..|-+.  +-.++.|++.+.+.+++=..++.+.+.+.  |...|+|
T Consensus        15 vlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~l~~~--L~~Li~e   64 (80)
T PF10264_consen   15 VLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEVLYNT--LGTLIKE   64 (80)
T ss_pred             HHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHHHHHH--HHHHHHc
Confidence            455555555443  56788889988888875444466665533  4445555


No 69 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=21.23  E-value=82  Score=20.43  Aligned_cols=17  Identities=18%  Similarity=0.186  Sum_probs=14.8

Q ss_pred             CCceEEeecCeeEEEec
Q 047311           93 GSRYIYSMGSIQIFCTT  109 (499)
Q Consensus        93 G~i~~~~~~~~~~vvv~  109 (499)
                      |++++++.||..++|..
T Consensus         4 GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    4 GDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCEEEEccCCCCeEEEE
Confidence            89999999998888763


No 70 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=20.88  E-value=2e+02  Score=20.46  Aligned_cols=23  Identities=9%  Similarity=0.166  Sum_probs=9.0

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHH
Q 047311            1 MAVVLGGVVLVVLFLLQHMYNAL   23 (499)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~   23 (499)
                      |.++=..++++++.+++++.+..
T Consensus         1 Mgl~Da~~~~V~V~IVclliya~   23 (92)
T PHA02681          1 MGLLDALLTVIVISIVCYIVIMM   23 (92)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHH
Confidence            34433333334443344443333


No 71 
>COG0140 HisI Phosphoribosyl-ATP pyrophosphohydrolase [Amino acid transport and metabolism]
Probab=20.30  E-value=3.7e+02  Score=19.89  Aligned_cols=25  Identities=16%  Similarity=0.254  Sum_probs=15.3

Q ss_pred             HHHHHHHHhhcCcchhHHHHHHHHHH
Q 047311          270 ILQVVKERSQSCSHEKDLLQMILEAA  295 (499)
Q Consensus       270 ~~~~i~~r~~~~~~~~d~l~~ll~~~  295 (499)
                      +.+.|.+|++.. .+.++...|+...
T Consensus         4 L~~~i~~Rk~~~-pe~SYTa~L~~~G   28 (92)
T COG0140           4 LEAVIADRKNAR-PEGSYTAKLLAKG   28 (92)
T ss_pred             HHHHHHHHHhcC-CCchHHHHHHHCc
Confidence            455666666544 3667777777653


Done!