BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047317
MEETLKALESSLSHIKWRLKSSSKLRLEIDILALCTGMRPVIMVDYGGKMPELQEHLCEL
LKRCQKESPSFEHLRVMVIEDMIYLIHVKGLAEYVSSSLSSEAELHFVDLEQDPPKMITL
KEKSSVGMQLISVQKLFSLVFPLNGMTDEIRLPNRTDHTIEATSSNITISPQSTEVVDLS
SCICDSQVTIPTLNGWLLGYPVVYLFDKEHIADAIYNLSTQSLRIFKILVTRNGPFSKGS
MPEELMSFSVPYELSMEGSNEPWAEMFLAKMQSKWAKCKPTWRTLQMEVSECFPQAIAL

High Scoring Gene Products

Symbol, full name Information P value
AT3G59490 protein from Arabidopsis thaliana 6.3e-92
zgc:112163 gene_product from Danio rerio 0.00027

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047317
        (299 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2097568 - symbol:AT3G59490 "AT3G59490" species...   916  6.3e-92   1
ZFIN|ZDB-GENE-050417-227 - symbol:zgc:112163 "zgc:112163"...   105  0.00027   2


>TAIR|locus:2097568 [details] [associations]
            symbol:AT3G59490 "AT3G59490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AL138659 UniGene:At.1113
            UniGene:At.34627 IPI:IPI00892339 RefSeq:NP_001118858.1
            EnsemblPlants:AT3G59490.2 GeneID:825118 KEGG:ath:AT3G59490
            TAIR:At3g59490 eggNOG:NOG289901 HOGENOM:HOG000064660 OMA:FIARMNE
            PhylomeDB:B3H686 ProtClustDB:CLSN2680459 Genevestigator:B3H686
            Uniprot:B3H686
        Length = 293

 Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
 Identities = 184/298 (61%), Positives = 227/298 (76%)

Query:     2 EETLKALESSLSHIKWRLKSSSKLRLEIDILALCTGMRPVIMVDYGGKMPELQEHLCELL 61
             EE L+ L S LS IKWRLKS+SK RLEID+LALCTGMRPV+M+DYGGKMPELQ  L  LL
Sbjct:     7 EELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQNRLLSLL 66

Query:    62 KRCQKESPSFEHLRVMVIEDMIYLIHVKGLAEYVSSSLSSEAELHFVDLEQDPPKMITLK 121
             +  ++  P F+ L+VMVIEDMIYLI+V+ L ++VSSSL SE EL F+DLEQDPPKM+T  
Sbjct:    67 ELIREGLPVFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPPKMVTQS 126

Query:   122 EKSSVGMQLISVQKLFSLVFPLNGMTDEIRLPNRTDHTIEATSSNITISPQSTEVVDLSS 181
             ++S++GMQL S+QKLFS  FPL    D+    + TD T     +N   S Q++  +DLS 
Sbjct:   127 KESNLGMQLRSIQKLFSSTFPL----DD----SNTDTTTVLDEAN---SSQTSLCIDLSC 175

Query:   182 CICDSQVTIPTLNGWLLGYPVVYLFDKEHIADAIYNLSTQSLRIFKILVTRNGPFSKGSM 241
             C+ D++VTIPTLNGWLL YPVVYLF  +HI +AIYNLST+SLR+FK+LV RNG   K S 
Sbjct:   176 CLQDTKVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKDSH 235

Query:   242 PEELMSFSVPYELSMEGSNEPWAEMFLAKMQSKWAKCKPTWRTLQMEVSECFPQAIAL 299
              EEL SFSVPY+LSMEGS E WAE FL +M S+W +CK  WR+L ++VSEC+PQAI L
Sbjct:   236 LEELTSFSVPYDLSMEGSKEVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVL 293


>ZFIN|ZDB-GENE-050417-227 [details] [associations]
            symbol:zgc:112163 "zgc:112163" species:7955 "Danio
            rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] ZFIN:ZDB-GENE-050417-227 EMBL:BC093235 IPI:IPI00509583
            RefSeq:NP_001017723.1 UniGene:Dr.87830 Ensembl:ENSDART00000004295
            GeneID:550418 KEGG:dre:550418 eggNOG:NOG39467
            GeneTree:ENSGT00390000002240 HOGENOM:HOG000111227
            HOVERGEN:HBG080000 InParanoid:Q567C3 OMA:CTVFGIL OrthoDB:EOG48KRBX
            NextBio:20879665 Bgee:Q567C3 Uniprot:Q567C3
        Length = 259

 Score = 105 (42.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
 Identities = 35/110 (31%), Positives = 57/110 (51%)

Query:     3 ETL-KALESSLSHIKWRLKSSSKLRLEIDILALCTGMRPVIMVDYGGKMPE-LQEHLCEL 60
             ETL  A +  L   K RL  SS L + I I+A+  G++P ++ D  G  P+ LQ +L  L
Sbjct:     7 ETLISAAQKCLCSRKKRLSPSSCLEVTIHIIAVDLGVKPALLYDSNGASPDQLQLYLHSL 66

Query:    61 LKRCQKESPSFEHLRVMVIEDMIYLIHVKGLAEYVSSSLSSEAELHFVDL 110
                 Q+ S     LR+M I D  ++I+   +  ++   L S++ L  +D+
Sbjct:    67 ----QESSVVSNSLRIMSINDNTFIINPDIMKSHLGELLKSKS-LPLIDV 111

 Score = 46 (21.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
 Identities = 24/77 (31%), Positives = 32/77 (41%)

Query:   192 TLNGWLLGYPVVYLFDKEHIADAIYN-LSTQSLRIFKILVTRNGPFSKGSMPEELMSFSV 250
             T  G LLGYP  Y F++        N LS   L +  + V       K      L SFSV
Sbjct:   159 TFFGILLGYPASYWFEQ---TQGFENCLSMTPLVVCTVWVRWQIHEIKQRCC--LYSFSV 213

Query:   251 PYEL--SMEGSNEPWAE 265
             P EL   ++   + W +
Sbjct:   214 PEELWSDVQSHIQRWTD 230


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      299       299   0.00095  115 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  219 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.51u 0.12s 25.63t   Elapsed:  00:00:02
  Total cpu time:  25.51u 0.12s 25.63t   Elapsed:  00:00:02
  Start:  Sat May 11 03:32:35 2013   End:  Sat May 11 03:32:37 2013

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