BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047317
         (299 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q07G87|CA074_XENTR UPF0739 protein C1orf74 homolog OS=Xenopus tropicalis
           GN=TEgg073c16.1 PE=2 SV=1
          Length = 263

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 47/248 (18%)

Query: 12  LSHIKWRLKSSSK------LRLEIDILALCTGMRPVIMVDYGGKMPELQEHLCELLKRCQ 65
           LS  ++ LK + +      L L  +ILA+  G++P  + DY     +    +C  LK  Q
Sbjct: 10  LSAARYHLKETKRMSMMVALNLAAEILAVDCGLKPCFLYDYTTSGVQ---QICSYLKELQ 66

Query: 66  KESPSFEHLRVMVIEDMIYLIHVKGLAEYVSSSLSSEAELHFVDLEQ--DPPKMITLKEK 123
                  HL ++ IE+ I +I+V     Y+ + L S+ +LH +D+      P++++  + 
Sbjct: 67  NLGLIVGHLHILNIEETILIINVTKAVSYLETLLHSQ-DLHLIDVSNYLSQPELVSSNQV 125

Query: 124 SSVGMQLISVQKLFSLVFPLNGMTDEIRLPNRTDHTIEATSSNITISPQSTEVVDLSSCI 183
             +  QL    +L   + P                         +  P S  V  + S  
Sbjct: 126 PQIHAQL---AELLGHIKPYQ-----------------------SGQPASVSVGGIQS-- 157

Query: 184 CDSQVTIPTLNGWLLGYPVVYLFDKEHIADAIYNLSTQSLRIFKILVTRNGPFSKGSMPE 243
              +  + T+ G+ L +P  Y FD +   +    LS   LR+F +    +     G    
Sbjct: 158 --PEWNLCTMFGFFLQFPSTYWFDTQKGFENC--LSFTPLRLFTVQANCS---RIGHQSV 210

Query: 244 ELMSFSVP 251
           ++ SF+VP
Sbjct: 211 QIYSFTVP 218


>sp|Q5PQ92|CA074_XENLA UPF0739 protein C1orf74 homolog OS=Xenopus laevis PE=2 SV=2
          Length = 262

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 43/248 (17%)

Query: 8   LESSLSHIK--WRLKSSSKLRLEIDILALCTGMRPVIMVDYGGKMPELQEHLCELLKRCQ 65
           L ++  H+K   R+     L L  +ILA+  G++P  + DY     +    +C  LK  Q
Sbjct: 10  LSAARHHLKETKRMSMMVALNLAAEILAVDCGLKPCFLYDYTTSGVQ---QICSYLKELQ 66

Query: 66  KESPSFEHLRVMVIEDMIYLIHVKGLAEYVSSSLSSEAELHFVDLEQ--DPPKMITLKEK 123
                  HL ++ +E+ I +I+V     Y+ + L S+ +LH +D+      P++++  + 
Sbjct: 67  NLGLIVGHLHILNVEETILIINVTKAVSYLETLLHSQ-DLHLIDVSNYLSQPELVSSNQV 125

Query: 124 SSVGMQLISVQKLFSLVFPLNGMTDEIRLPNRTDHTIEATSSNITISPQSTEVVDLSSCI 183
             +  QL    +L   + P                         +  P S  V  + S  
Sbjct: 126 PQIHAQL---AELLGHIKPYQ-----------------------SGQPTSVSVGGIQS-- 157

Query: 184 CDSQVTIPTLNGWLLGYPVVYLFDKEHIADAIYNLSTQSLRIFKILVTRNGPFSKGSMPE 243
              +  + T+ G+LL +P  Y FD +   +    LS   LR+F +   +      G    
Sbjct: 158 --PEWNLCTMFGFLLQFPSTYWFDTQKGFENC--LSFTPLRLFTV---QANCSRIGHQSV 210

Query: 244 ELMSFSVP 251
           ++ SF+VP
Sbjct: 211 QIYSFTVP 218


>sp|Q5U2R2|CA074_RAT UPF0739 protein C1orf74 homolog OS=Rattus norvegicus PE=2 SV=1
          Length = 263

 Score = 37.7 bits (86), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 192 TLNGWLLGYPVVYLFDKEHIADAIYNLSTQSLRIFKILVTRNGPFSKGSMPEELMSFSVP 251
           TL G LLGYPV Y FD  H       L+   LR+F   ++    +  G  P  L SFSVP
Sbjct: 165 TLFGILLGYPVSYTFDLNHGEGNC--LTMTPLRVFTAQIS----WLSGQPPVPLYSFSVP 218

Query: 252 YEL 254
             L
Sbjct: 219 ESL 221


>sp|A6QQA5|CA074_BOVIN UPF0739 protein C1orf74 homolog OS=Bos taurus PE=2 SV=1
          Length = 263

 Score = 36.6 bits (83), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 49/235 (20%)

Query: 25  LRLEIDILALCTGMRPVIMVDYG-GKMPELQEHLCELLKRCQKESPSFEHLRVMVIEDMI 83
           L L  ++LA+  G++P ++ D      PE+Q +L    ++ +      + L V+ I +  
Sbjct: 31  LHLAGEVLAVARGLKPALLYDCSSAGAPEIQSYL----EKLRGLGFPTQGLHVLEIAENS 86

Query: 84  YLIHVKGLAEYVSSSLSSE--AELHFVDLE--QDPPKMITLKEKSSVGMQLISVQKLFSL 139
            ++H     EYV   L       + FVD+   Q  P + +L +       ++ +      
Sbjct: 87  LIVH----PEYVRRHLEQVLLGSIAFVDVSGSQPYPAVCSLDQLQDFKALVVEI------ 136

Query: 140 VFPLNGMTDEIRLPNRTDHTIEATSSNITISPQSTEVVDLSSCICDSQVTIPTLNGWLLG 199
           +  L G+        + D ++  + S +                C S   + T+ G LLG
Sbjct: 137 ITHLQGL--------QRDRSLAVSCSRL----------------CSSAWNLCTVFGILLG 172

Query: 200 YPVVYLFDKEHIADAIYNLSTQSLRIFKILVTRNGPFSKGSMPEELMSFSVPYEL 254
           YPV Y F +    D    L+   LR+F   ++    +     P  L SFSVP  L
Sbjct: 173 YPVPYTFHENQGEDNC--LAQTPLRVFTARIS----WLCCQPPVLLYSFSVPESL 221


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.132    0.388 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,414,698
Number of Sequences: 539616
Number of extensions: 4048276
Number of successful extensions: 9938
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9931
Number of HSP's gapped (non-prelim): 11
length of query: 299
length of database: 191,569,459
effective HSP length: 117
effective length of query: 182
effective length of database: 128,434,387
effective search space: 23375058434
effective search space used: 23375058434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)