BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>047331
LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEK
ELMKNPPPSEADREAAKLFVKEKGEGVAKLKSKKASKEVLLN
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with SYNC3 SYNC3 SYNC3	protein from Arabidopsis thaliana	7.6e-22
BLAST match view associations BLAST with SYNC1 SYNC1 SYNC1	protein from Arabidopsis thaliana	7.1e-19
BLAST match view associations BLAST with F6QRZ3 F6QRZ3 F6QRZ3 Uncharacterized protein	protein from Bos taurus	9.9e-06
BLAST match view associations BLAST with GSU_1156 GSU_1156 GSU_1156 asparaginyl-tRNA synthetase	protein from Geobacter sulfurreducens PCA	4.1e-05
BLAST match view associations BLAST with SO_2218 SO_2218 SO_2218 asparaginyl-tRNA synthetase	protein from Shewanella oneidensis MR-1	6.8e-05
BLAST match view associations BLAST with NARS2 NARS2 NARS2 Uncharacterized protein	protein from Gallus gallus	0.00019
BLAST match view associations BLAST with NARS2 NARS2 NARS2 Uncharacterized protein	protein from Sus scrofa	0.00030
BLAST match view associations BLAST with NARS2 NARS2 NARS2 Probable asparagine--tRNA ligase, mitochondrial	protein from Homo sapiens	0.00063
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047331
        (102 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2014005 - symbol:SYNC3 species:3702 "Arabidops...   172  7.6e-22   2
TAIR|locus:2165001 - symbol:SYNC1 species:3702 "Arabidops...   157  7.1e-19   2
UNIPROTKB|F6QRZ3 - symbol:F6QRZ3 "Uncharacterized protein...    66  9.9e-06   3
TIGR_CMR|GSU_1156 - symbol:GSU_1156 "asparaginyl-tRNA syn...    73  4.1e-05   2
TIGR_CMR|SO_2218 - symbol:SO_2218 "asparaginyl-tRNA synth...    70  6.8e-05   2
UNIPROTKB|E1C702 - symbol:NARS2 "Uncharacterized protein"...    67  0.00019   2
UNIPROTKB|F1STW6 - symbol:NARS2 "Uncharacterized protein"...    67  0.00030   2
UNIPROTKB|E9PRK2 - symbol:NARS2 "Probable asparagine--tRN...    68  0.00063   2


>TAIR|locus:2014005 [details] [associations]
            symbol:SYNC3 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase
            activity" evidence=IEA] [GO:0004816 "asparagine-tRNA ligase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006418 "tRNA
            aminoacylation for protein translation" evidence=IEA] [GO:0006421
            "asparaginyl-tRNA aminoacylation" evidence=IEA] [GO:0005829
            "cytosol" evidence=IDA] InterPro:IPR000738 InterPro:IPR002312
            InterPro:IPR004364 InterPro:IPR004365 InterPro:IPR004522
            InterPro:IPR006195 InterPro:IPR018150 Pfam:PF00152 Pfam:PF01336
            PRINTS:PR01042 PROSITE:PS00762 PROSITE:PS50862 PROSITE:PS51185
            SMART:SM00991 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
            GO:GO:0005524 GO:GO:0003676 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 EMBL:AC008148 PANTHER:PTHR22594 Gene3D:1.10.287.10
            InterPro:IPR009068 eggNOG:COG0017 HOGENOM:HOG000226033 KO:K01893
            ProtClustDB:PLN02221 GO:GO:0004816 GO:GO:0006421
            PANTHER:PTHR22594:SF6 TIGRFAMs:TIGR00457 IPI:IPI00543324 PIR:B96734
            RefSeq:NP_177254.1 UniGene:At.35245 ProteinModelPortal:Q9SSK1
            SMR:Q9SSK1 PaxDb:Q9SSK1 PRIDE:Q9SSK1 EnsemblPlants:AT1G70980.1
            GeneID:843436 KEGG:ath:AT1G70980 GeneFarm:2805 TAIR:At1g70980
            InParanoid:Q9SSK1 OMA:FVSPGHE PhylomeDB:Q9SSK1
            Genevestigator:Q9SSK1 GermOnline:AT1G70980 Uniprot:Q9SSK1
        Length = 571

 Score = 172 (65.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
 Identities = 36/66 (54%), Positives = 43/66 (65%)

Query:    33 LVERNGCGGAGEMFQVTTXXXXXXXXXXXXXXNPPPSEADREAAKLFVKEKGEGVAKLKS 92
             ++  + C GAGEMFQVTT              NPPP+EAD EAA+L VKE+GE VA+LK 
Sbjct:   194 IITTSDCEGAGEMFQVTTLINHTERVEQDLIDNPPPTEADVEAARLIVKERGEAVAQLKV 253

Query:    93 KKASKE 98
              KASKE
Sbjct:   254 AKASKE 259

 Score = 116 (45.9 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
 Identities = 22/35 (62%), Positives = 26/35 (74%)

Query:     1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 35
             + GWVK GR+Q K   AF EVNDGSC  NLQV+V+
Sbjct:    52 IGGWVKTGRQQGKGTFAFLEVNDGSCPANLQVMVD 86

 Score = 30 (15.6 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query:    71 ADREAAKLFVKEKGEGVAKLKSKKAS 96
             A  + AK   +E    VA+L   KAS
Sbjct:   249 AQLKVAKASKEEITASVAQLSVAKAS 274


>TAIR|locus:2165001 [details] [associations]
            symbol:SYNC1 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase
            activity" evidence=IEA] [GO:0004816 "asparagine-tRNA ligase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006418 "tRNA
            aminoacylation for protein translation" evidence=IEA] [GO:0006421
            "asparaginyl-tRNA aminoacylation" evidence=IEA] [GO:0009793 "embryo
            development ending in seed dormancy" evidence=IMP;NAS] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0046686 "response to cadmium ion" evidence=IEP]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000738
            InterPro:IPR002312 InterPro:IPR004364 InterPro:IPR004365
            InterPro:IPR004522 InterPro:IPR006195 InterPro:IPR018150
            Pfam:PF00152 Pfam:PF01336 PRINTS:PR01042 PROSITE:PS00762
            PROSITE:PS50862 PROSITE:PS51185 SMART:SM00991 GO:GO:0005829
            GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009507 GO:GO:0046686 GO:GO:0003676 GO:GO:0009793
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AB013392
            PANTHER:PTHR22594 Gene3D:1.10.287.10 InterPro:IPR009068
            eggNOG:COG0017 EMBL:AF170909 IPI:IPI00548665 RefSeq:NP_200479.1
            UniGene:At.22552 ProteinModelPortal:Q9SW96 SMR:Q9SW96 PaxDb:Q9SW96
            PRIDE:Q9SW96 EnsemblPlants:AT5G56680.1 GeneID:835769
            KEGG:ath:AT5G56680 GeneFarm:2800 TAIR:At5g56680
            HOGENOM:HOG000226033 InParanoid:Q9SW96 KO:K01893 OMA:HYELHAD
            PhylomeDB:Q9SW96 ProtClustDB:PLN02221 Genevestigator:Q9SW96
            GermOnline:AT5G56680 GO:GO:0004816 GO:GO:0006421
            PANTHER:PTHR22594:SF6 TIGRFAMs:TIGR00457 Uniprot:Q9SW96
        Length = 572

 Score = 157 (60.3 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
 Identities = 33/68 (48%), Positives = 42/68 (61%)

Query:    33 LVERNGCGGAGEMFQVTTXXXXXXXXXXXXXXNPPPSEADREAAKLFVKEKGEGVAKLKS 92
             ++  + C GAGEMFQ TT              NPPP+EAD EAA+L V E+G  VA+LK+
Sbjct:   197 IITTSDCEGAGEMFQATTLINYTERLEQDLIDNPPPTEADVEAARLIVIERGNVVAELKA 256

Query:    93 KKASKEVL 100
              KASKE +
Sbjct:   257 AKASKEAI 264

 Score = 103 (41.3 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
 Identities = 20/35 (57%), Positives = 24/35 (68%)

Query:     1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 35
             + GWVK GR Q K   +F  VNDGSC  NLQV+V+
Sbjct:    55 IGGWVKSGRDQGKRTFSFLAVNDGSCPANLQVMVD 89


>UNIPROTKB|F6QRZ3 [details] [associations]
            symbol:F6QRZ3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006421 "asparaginyl-tRNA aminoacylation" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004816 "asparagine-tRNA ligase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR002312 InterPro:IPR004364 InterPro:IPR004365
            InterPro:IPR004522 InterPro:IPR018150 Pfam:PF00152 Pfam:PF01336
            PRINTS:PR01042 GO:GO:0005524 GO:GO:0005737 GO:GO:0003676
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            PANTHER:PTHR22594 GO:GO:0004816 GO:GO:0006421 PANTHER:PTHR22594:SF6
            TIGRFAMs:TIGR00457 OMA:DLWWYLD GeneTree:ENSGT00550000074970
            EMBL:DAAA02062716 EMBL:DAAA02062717 IPI:IPI00715501
            Ensembl:ENSBTAT00000056422 Uniprot:F6QRZ3
        Length = 478

 Score = 66 (28.3 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query:     3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 35
             GW++  R Q K+ L F  VNDGS  ++LQV+ +
Sbjct:    48 GWIRSIRSQ-KEVL-FLHVNDGSSLESLQVVAD 78

 Score = 52 (23.4 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query:    33 LVERNGCGGAGEMFQV 48
             ++  N C GAGE+FQV
Sbjct:   182 VITSNDCEGAGELFQV 197

 Score = 31 (16.0 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query:    65 NPPPS 69
             NPPPS
Sbjct:   290 NPPPS 294


>TIGR_CMR|GSU_1156 [details] [associations]
            symbol:GSU_1156 "asparaginyl-tRNA synthetase"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0004816
            "asparagine-tRNA ligase activity" evidence=ISS] [GO:0006421
            "asparaginyl-tRNA aminoacylation" evidence=ISS] InterPro:IPR002312
            InterPro:IPR004364 InterPro:IPR004365 InterPro:IPR004522
            InterPro:IPR006195 InterPro:IPR018150 Pfam:PF00152 Pfam:PF01336
            PRINTS:PR01042 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            PANTHER:PTHR22594 eggNOG:COG0017 HOGENOM:HOG000226033 KO:K01893
            GO:GO:0004816 GO:GO:0006421 PANTHER:PTHR22594:SF6
            TIGRFAMs:TIGR00457 ProtClustDB:PRK03932 HAMAP:MF_00534
            RefSeq:NP_952209.1 ProteinModelPortal:Q74E08 GeneID:2685936
            KEGG:gsu:GSU1156 PATRIC:22025084 OMA:HEQGFYW
            BioCyc:GSUL243231:GH27-1127-MONOMER Uniprot:Q74E08
        Length = 461

 Score = 73 (30.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
 Identities = 17/33 (51%), Positives = 21/33 (63%)

Query:     3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 35
             GWV+  R   K  +AF  VNDGSC  +LQV+ E
Sbjct:    24 GWVRTSRV-GKG-VAFLAVNDGSCLASLQVVAE 54

 Score = 54 (24.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
 Identities = 9/18 (50%), Positives = 14/18 (77%)

Query:    33 LVERNGCGGAGEMFQVTT 50
             ++  + C GAGE+F+VTT
Sbjct:   160 IITTSDCEGAGELFRVTT 177


>TIGR_CMR|SO_2218 [details] [associations]
            symbol:SO_2218 "asparaginyl-tRNA synthetase" species:211586
            "Shewanella oneidensis MR-1" [GO:0004816 "asparagine-tRNA ligase
            activity" evidence=ISS] [GO:0006421 "asparaginyl-tRNA
            aminoacylation" evidence=ISS] InterPro:IPR002312 InterPro:IPR004364
            InterPro:IPR004365 InterPro:IPR004522 InterPro:IPR006195
            InterPro:IPR018150 Pfam:PF00152 Pfam:PF01336 PRINTS:PR01042
            PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737 GO:GO:0003676
            EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 PANTHER:PTHR22594 eggNOG:COG0017
            HOGENOM:HOG000226033 KO:K01893 GO:GO:0004816 GO:GO:0006421
            PANTHER:PTHR22594:SF6 TIGRFAMs:TIGR00457 OMA:DLWWYLD
            ProtClustDB:PRK03932 HAMAP:MF_00534 RefSeq:NP_717815.1
            ProteinModelPortal:Q8EEZ1 GeneID:1169955 KEGG:son:SO_2218
            PATRIC:23524067 Uniprot:Q8EEZ1
        Length = 466

 Score = 70 (29.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query:     3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLV 34
             GWV+  R+  K  ++F  V DGSCF+ +Q +V
Sbjct:    24 GWVRT-RRDSKAGISFLAVYDGSCFNPIQGVV 54

 Score = 55 (24.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
 Identities = 10/18 (55%), Positives = 14/18 (77%)

Query:    33 LVERNGCGGAGEMFQVTT 50
             L+  + C GAGEMF+V+T
Sbjct:   164 LITASDCEGAGEMFRVST 181


>UNIPROTKB|E1C702 [details] [associations]
            symbol:NARS2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004816 "asparagine-tRNA ligase activity" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006421 "asparaginyl-tRNA
            aminoacylation" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR002312 InterPro:IPR004364
            InterPro:IPR004365 InterPro:IPR004522 InterPro:IPR006195
            InterPro:IPR018150 Pfam:PF00152 Pfam:PF01336 PRINTS:PR01042
            PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737 GO:GO:0003676
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            PANTHER:PTHR22594 KO:K01893 GO:GO:0004816 GO:GO:0006421
            PANTHER:PTHR22594:SF6 TIGRFAMs:TIGR00457 OMA:DLWWYLD CTD:79731
            GeneTree:ENSGT00550000074970 HAMAP:MF_00534 EMBL:AADN02004295
            EMBL:AADN02004296 EMBL:AADN02004297 EMBL:AADN02004298
            EMBL:AADN02004299 EMBL:AADN02004300 IPI:IPI00587216
            RefSeq:XP_417219.2 Ensembl:ENSGALT00000027904 GeneID:419026
            KEGG:gga:419026 NextBio:20822138 Uniprot:E1C702
        Length = 478

 Score = 67 (28.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query:     3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 35
             GWV+  R Q K+ L F  +NDGS  ++LQV+ +
Sbjct:    47 GWVRSVRSQ-KEVL-FLHINDGSSLESLQVVAD 77

 Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query:    33 LVERNGCGGAGEMFQVTTXXXXXXXXXXXXXXNPP 67
             ++  N C GAG++FQ+ T              N P
Sbjct:   181 IITSNDCEGAGDLFQIETSHEAKEAAEKNHFFNVP 215


>UNIPROTKB|F1STW6 [details] [associations]
            symbol:NARS2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006421
            "asparaginyl-tRNA aminoacylation" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0004816 "asparagine-tRNA ligase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR002312 InterPro:IPR004364
            InterPro:IPR004365 InterPro:IPR004522 InterPro:IPR006195
            InterPro:IPR018150 Pfam:PF00152 Pfam:PF01336 PRINTS:PR01042
            PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737 GO:GO:0003676
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            PANTHER:PTHR22594 KO:K01893 GO:GO:0004816 GO:GO:0006421
            PANTHER:PTHR22594:SF6 TIGRFAMs:TIGR00457 OMA:DLWWYLD CTD:79731
            GeneTree:ENSGT00550000074970 HAMAP:MF_00534 EMBL:CU694792
            EMBL:CU464017 RefSeq:XP_003129750.1 UniGene:Ssc.27081
            Ensembl:ENSSSCT00000016248 GeneID:100514245 KEGG:ssc:100514245
            Uniprot:F1STW6
        Length = 477

 Score = 67 (28.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query:     3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 35
             GW++  R Q K+ L F  VNDGS  ++LQV+ +
Sbjct:    48 GWIRSVRSQ-KEVL-FLHVNDGSSLESLQVVAD 78

 Score = 52 (23.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query:    33 LVERNGCGGAGEMFQV 48
             ++  N C GAGE+FQV
Sbjct:   182 VITSNDCEGAGELFQV 197


>UNIPROTKB|E9PRK2 [details] [associations]
            symbol:NARS2 "Probable asparagine--tRNA ligase,
            mitochondrial" species:9606 "Homo sapiens" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004816 "asparagine-tRNA ligase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006421 "asparaginyl-tRNA
            aminoacylation" evidence=IEA] InterPro:IPR004364 InterPro:IPR004365
            InterPro:IPR004522 InterPro:IPR018150 Pfam:PF00152 Pfam:PF01336
            GO:GO:0005524 GO:GO:0005737 GO:GO:0003676 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 PANTHER:PTHR22594 GO:GO:0004816
            GO:GO:0006421 PANTHER:PTHR22594:SF6 EMBL:AP003086 EMBL:AP003110
            HGNC:HGNC:26274 ChiTaRS:NARS2 IPI:IPI00980024
            ProteinModelPortal:E9PRK2 SMR:E9PRK2 Ensembl:ENST00000529880
            ArrayExpress:E9PRK2 Bgee:E9PRK2 Uniprot:E9PRK2
        Length = 241

 Score = 68 (29.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query:     1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 35
             + GW++  R Q K+ L F  VNDGS  ++LQV+ +
Sbjct:    46 IQGWIRSVRSQ-KEVL-FLHVNDGSSLESLQVVAD 78

 Score = 40 (19.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query:    33 LVERNGCGGAGEMFQV 48
             ++  N   GAGE+FQ+
Sbjct:   182 IITSNDSEGAGELFQL 197


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.134   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102        88   0.00091  102 3  11 23  0.38    30
                                                     29  0.49    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  519 (55 KB)
  Total size of DFA:  104 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.08u 0.20s 8.28t   Elapsed:  00:00:01
  Total cpu time:  8.08u 0.20s 8.28t   Elapsed:  00:00:01
  Start:  Sat May 11 04:23:02 2013   End:  Sat May 11 04:23:03 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
