BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047331
(102 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SSK1|SYNC3_ARATH Asparagine--tRNA ligase, cytoplasmic 3 OS=Arabidopsis thaliana
GN=SYNC3 PE=3 SV=1
Length = 571
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%)
Query: 33 LVERNGCGGAGEMFQVTTLLSEAEKLEKELMKNPPPSEADREAAKLFVKEKGEGVAKLKS 92
++ + C GAGEMFQVTTL++ E++E++L+ NPPP+EAD EAA+L VKE+GE VA+LK
Sbjct: 194 IITTSDCEGAGEMFQVTTLINHTERVEQDLIDNPPPTEADVEAARLIVKERGEAVAQLKV 253
Query: 93 KKASKE 98
KASKE
Sbjct: 254 AKASKE 259
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEK 60
+ GWVK GR+Q K AF EVNDGSC NLQV+V+ + ++ ++ L++ +
Sbjct: 52 IGGWVKTGRQQGKGTFAFLEVNDGSCPANLQVMVDSS-------LYDLSRLVATGTCVTV 104
Query: 61 E-LMKNPPPSEADREAAKLFVK 81
+ ++K PP + +++ +L V+
Sbjct: 105 DGVLKIPPEGKGLKQSIELSVE 126
>sp|Q9SW96|SYNC1_ARATH Asparagine--tRNA ligase, cytoplasmic 1 OS=Arabidopsis thaliana
GN=SYNC1 PE=2 SV=1
Length = 572
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/68 (55%), Positives = 53/68 (77%)
Query: 33 LVERNGCGGAGEMFQVTTLLSEAEKLEKELMKNPPPSEADREAAKLFVKEKGEGVAKLKS 92
++ + C GAGEMFQ TTL++ E+LE++L+ NPPP+EAD EAA+L V E+G VA+LK+
Sbjct: 197 IITTSDCEGAGEMFQATTLINYTERLEQDLIDNPPPTEADVEAARLIVIERGNVVAELKA 256
Query: 93 KKASKEVL 100
KASKE +
Sbjct: 257 AKASKEAI 264
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEK 60
+ GWVK GR Q K +F VNDGSC NLQV+V+ + ++ V+ L++ +
Sbjct: 55 IGGWVKSGRDQGKRTFSFLAVNDGSCPANLQVMVDPS-------LYDVSNLVATGTCVTV 107
Query: 61 E-LMKNPPPSEADREAAKLFV 80
+ ++K PP + ++ +L V
Sbjct: 108 DGVLKVPPKGKGTQQQIELNV 128
>sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=SYNO PE=2 SV=3
Length = 567
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCG-----------GAGEMFQVT 49
+ GWV+ R Q + F E+NDGSC NLQ ++ + G GA Q T
Sbjct: 114 IMGWVRTLRSQSS--VTFIEINDGSCLSNLQCVMTSDAEGYDQVESGSILTGASVSVQGT 171
Query: 50 TLLSEAEKLEKELMKNPPPSEADREAAKLFVKEKGEGVAKLKSKKASKEVL 100
+ S+ K + EL + K+ V + + ++ K+ S+E L
Sbjct: 172 IVASQGTKQKVEL-----------KVEKIIVVGECDSSYPIQKKRVSREFL 211
>sp|Q65TR1|SYN_MANSM Asparagine--tRNA ligase OS=Mannheimia succiniciproducens (strain
MBEL55E) GN=asnS PE=3 SV=1
Length = 467
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K L+F V DGSCFD +Q ++ + E+ ++TT
Sbjct: 25 GWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIVNYESEVLRLTT 71
>sp|A1V9B8|SYN_DESVV Asparagine--tRNA ligase OS=Desulfovibrio vulgaris subsp. vulgaris
(strain DP4) GN=asnS PE=3 SV=1
Length = 461
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEK 60
L GWV+ R D +F E+NDGSC N+Q +V+ G + V+T A +
Sbjct: 21 LCGWVRTRR--DAKGFSFLEINDGSCLANIQAIVDE-GIPAYANIGAVST--GAAVDITG 75
Query: 61 ELMKNP 66
EL+++P
Sbjct: 76 ELVESP 81
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 9/44 (20%)
Query: 39 CGGAGEMFQVTTLLSEAEKLEKELMKNPPPSEADREAAKLFVKE 82
C GAGEMF+VTTL E +P P+ +R F KE
Sbjct: 166 CEGAGEMFRVTTLPVEG---------SPTPASGNRYENDFFGKE 200
>sp|Q72G53|SYN_DESVH Asparagine--tRNA ligase OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=asnS PE=3
SV=1
Length = 461
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEK 60
L GWV+ R D +F E+NDGSC N+Q +V+ G + V+T A +
Sbjct: 21 LCGWVRTRR--DAKGFSFLEINDGSCLANIQAIVDE-GIPAYANIGAVST--GAAVDITG 75
Query: 61 ELMKNP 66
EL+++P
Sbjct: 76 ELVESP 81
>sp|Q9SW95|SYNC2_ARATH Asparagine--tRNA ligase, cytoplasmic 2 OS=Arabidopsis thaliana
GN=SYNC2 PE=2 SV=2
Length = 638
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 41 GAGEMFQVTTLLSEAEKLEKELMKNPPPSEADR---EAAKLFVKEKGEGVAKLKSKKASK 97
G GEMF+VTTLL + + E+ K PP E D + K +KEK + LK +++
Sbjct: 273 GFGEMFRVTTLLGKTDDKEE---KKPPVQEKDGFSIDTVKAVIKEKTRLIDHLKRSDSNR 329
Query: 98 EVLL 101
E ++
Sbjct: 330 ETVV 333
>sp|A5UCB9|SYN_HAEIE Asparagine--tRNA ligase OS=Haemophilus influenzae (strain PittEE)
GN=asnS PE=3 SV=1
Length = 467
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K L+F V DGSCFD +Q ++ + E+ ++TT
Sbjct: 25 GWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTT 71
>sp|A3DBI2|SYN_CLOTH Asparagine--tRNA ligase OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=asnS PE=3 SV=1
Length = 464
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQV---TTLLSEAEK 57
+AGWV+ R D F E+NDGS F NLQ++ E E+ ++ + +++ E
Sbjct: 23 VAGWVRTVR--DSKAFGFIELNDGSFFKNLQIVFEEKNLPNFKEIAKLSVGSAIIAHGEL 80
Query: 58 LEKELMKNPPPSEADREAAKLFVKEKGEGVAKLKSKKASKEVL 100
+E K P + +A K+ ++ L+ K+ S E L
Sbjct: 81 VETPGAKQP----FELKATKIEIEGASTPDYPLQKKRHSFEYL 119
>sp|A5HZE1|SYN_CLOBH Asparagine--tRNA ligase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=asnS PE=3 SV=1
Length = 463
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEKEL 62
GWV+ R D AF EVNDGS F N+QV++E + E F+ + + +E E
Sbjct: 25 GWVRTVR--DSKNFAFVEVNDGSFFKNVQVILE-----SSLENFKELCKMPISTSVEVEG 77
Query: 63 MKNPPPSEA---DREAAKLFVKEKGEGVAKLKSKKASKEVL 100
+ P P+ + +A ++ ++ K L+ K+ + E L
Sbjct: 78 IVQPTPNAKQPFEIKATRISIEGKSSTDYPLQKKRHTFEYL 118
>sp|A7FRK8|SYN_CLOB1 Asparagine--tRNA ligase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=asnS PE=3 SV=1
Length = 463
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEKEL 62
GWV+ R D AF EVNDGS F N+QV++E + E F+ + + +E E
Sbjct: 25 GWVRTVR--DSKNFAFVEVNDGSFFKNVQVILE-----SSLENFKELCKMPISTSVEVEG 77
Query: 63 MKNPPPSEA---DREAAKLFVKEKGEGVAKLKSKKASKEVL 100
+ P P+ + +A ++ ++ K L+ K+ + E L
Sbjct: 78 IVQPTPNAKQPFEIKATRISIEGKSSTDYPLQKKRHTFEYL 118
>sp|A8GCJ5|SYN_SERP5 Asparagine--tRNA ligase OS=Serratia proteamaculans (strain 568)
GN=asnS PE=3 SV=1
Length = 466
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F V DGSCFD LQ +V + E+ +TT
Sbjct: 24 GWVRT-RRDSKAGISFLAVYDGSCFDPLQAVVNNSLPNYQDEVLHLTT 70
>sp|Q87NH5|SYN_VIBPA Asparagine--tRNA ligase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=asnS PE=3 SV=1
Length = 466
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GW++ R+ K ++F + DGSCFD +Q +V N E+ ++TT
Sbjct: 24 GWIR-SRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYDNEVLKLTT 70
>sp|A5UF16|SYN_HAEIG Asparagine--tRNA ligase OS=Haemophilus influenzae (strain PittGG)
GN=asnS PE=3 SV=1
Length = 467
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K L+F V DGSCFD +Q ++ + E+ ++TT
Sbjct: 25 GWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTT 71
>sp|Q317J6|SYN_DESDG Asparagine--tRNA ligase OS=Desulfovibrio desulfuricans (strain
G20) GN=asnS PE=3 SV=1
Length = 461
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 35
+ GWV+ R D +F E+NDGSC N+QV+V+
Sbjct: 21 ICGWVRTRR--DAKGFSFLELNDGSCLTNIQVIVD 53
>sp|P43829|SYN_HAEIN Asparagine--tRNA ligase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=asnS PE=3 SV=2
Length = 467
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K L+F V DGSCFD +Q ++ + E+ ++TT
Sbjct: 25 GWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTT 71
>sp|Q2SJV9|SYN_HAHCH Asparagine--tRNA ligase OS=Hahella chejuensis (strain KCTC 2396)
GN=asnS PE=3 SV=1
Length = 465
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
+ GWV+ R+ K ++F V+DGSCFD +Q +V + ++ ++TT
Sbjct: 22 VKGWVR-SRRDSKAGVSFIHVHDGSCFDAIQAVVAKELPNYDADVLRLTT 70
>sp|Q7MJS0|SYN_VIBVY Asparagine--tRNA ligase OS=Vibrio vulnificus (strain YJ016)
GN=asnS PE=3 SV=1
Length = 466
Score = 37.0 bits (84), Expect = 0.031, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GW++ R+ K ++F + DGSCFD +Q +V N E+ ++TT
Sbjct: 24 GWIRT-RRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYNDEVLKLTT 70
>sp|Q8DAF0|SYN_VIBVU Asparagine--tRNA ligase OS=Vibrio vulnificus (strain CMCP6)
GN=asnS PE=3 SV=1
Length = 466
Score = 37.0 bits (84), Expect = 0.031, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GW++ R+ K ++F + DGSCFD +Q +V N E+ ++TT
Sbjct: 24 GWIRT-RRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYNDEVLKLTT 70
>sp|Q1LT63|SYN_BAUCH Asparagine--tRNA ligase OS=Baumannia cicadellinicola subsp.
Homalodisca coagulata GN=asnS PE=3 SV=1
Length = 467
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F + DGSC D+LQV++ + ++ +TT
Sbjct: 25 GWVRT-RRDSKAGISFLSIYDGSCLDSLQVIINHDLPNYKSDVLHLTT 71
>sp|A0LL53|SYN_SYNFM Asparagine--tRNA ligase OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=asnS PE=3 SV=1
Length = 466
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVER 36
GWV+ ++ K ++F E+NDGSC NLQV+ ++
Sbjct: 26 GWVRT-KRDSKAGVSFIELNDGSCLRNLQVVADQ 58
>sp|Q7N622|SYN_PHOLL Asparagine--tRNA ligase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=asnS PE=3 SV=1
Length = 466
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GW++ R+ K ++F V DGSCF+ LQ +V N E+ +TT
Sbjct: 24 GWIRT-RRDSKAGISFLAVYDGSCFNPLQAVVNNNLPNYQDEVLHLTT 70
>sp|Q6D453|SYN_ERWCT Asparagine--tRNA ligase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=asnS PE=3 SV=1
Length = 466
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F V DGSCF+ LQ +V N ++ ++TT
Sbjct: 24 GWVRT-RRDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDDVLRLTT 70
>sp|A7GB01|SYN_CLOBL Asparagine--tRNA ligase OS=Clostridium botulinum (strain Langeland
/ NCTC 10281 / Type F) GN=asnS PE=3 SV=1
Length = 463
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEKEL 62
GWV+ R D AF EVNDGS F N+QV++E + E F+ + + +E E
Sbjct: 25 GWVRTVR--DSKNFAFVEVNDGSFFKNVQVILE-----SSLENFKELCKMPISTSVEVEG 77
Query: 63 MKNPPPSEA---DREAAKLFVKEKGEGVAKLKSKKASKEVL 100
+ P P+ + +A ++ ++ K L+ K+ + E L
Sbjct: 78 IIQPTPNAKQPFEIKATRVSIEGKSSTDYPLQKKRHTFEYL 118
>sp|Q39SY7|SYN_GEOMG Asparagine--tRNA ligase OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=asnS PE=3 SV=1
Length = 461
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 35
+ GWV+ R + +AF +NDGSCF NLQV+ E
Sbjct: 22 VKGWVRTIRTGKE--VAFLALNDGSCFANLQVVAE 54
>sp|Q7VR09|SYN_BLOFL Asparagine--tRNA ligase OS=Blochmannia floridanus GN=asnS PE=3
SV=1
Length = 470
Score = 36.6 bits (83), Expect = 0.047, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
L GW++ R+ K + F + DGSC ++LQ++V+ N ++ ++TT
Sbjct: 23 LYGWIRT-RRHSKTKITFLNLYDGSCLESLQIVVKNNLHNYETDILKLTT 71
>sp|Q66CG7|SYN_YERPS Asparagine--tRNA ligase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=asnS PE=3 SV=1
Length = 466
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F V DGSCFD LQ +V E+ +TT
Sbjct: 24 GWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
>sp|A4TMZ6|SYN_YERPP Asparagine--tRNA ligase OS=Yersinia pestis (strain Pestoides F)
GN=asnS PE=3 SV=1
Length = 466
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F V DGSCFD LQ +V E+ +TT
Sbjct: 24 GWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
>sp|Q1CGI7|SYN_YERPN Asparagine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=asnS PE=3 SV=1
Length = 466
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F V DGSCFD LQ +V E+ +TT
Sbjct: 24 GWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
>sp|P58697|SYN_YERPE Asparagine--tRNA ligase OS=Yersinia pestis GN=asnS PE=3 SV=1
Length = 466
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F V DGSCFD LQ +V E+ +TT
Sbjct: 24 GWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
>sp|Q1CA47|SYN_YERPA Asparagine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=asnS PE=3 SV=1
Length = 466
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F V DGSCFD LQ +V E+ +TT
Sbjct: 24 GWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
>sp|A7FJU5|SYN_YERP3 Asparagine--tRNA ligase OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=asnS PE=3 SV=1
Length = 466
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F V DGSCFD LQ +V E+ +TT
Sbjct: 24 GWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
>sp|Q899M9|SYN_CLOTE Asparagine--tRNA ligase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=asnS PE=3 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTL-LSEAEKLE 59
+AGW++ R F E+NDGS F NLQ++++ N +V+ L +S + +E
Sbjct: 23 VAGWIRTERTSKN--FGFIELNDGSFFKNLQIIIDTN----LDNFDKVSKLPISSSIVVE 76
Query: 60 KELMKNPPPSEA-DREAAKLFVKEKGEGVAKLKSKKASKEVL 100
+L+ P + + +A+K+ V+ L+ K+ S E L
Sbjct: 77 GKLVATPSAKQPFEVQASKVTVEGTSLQDYPLQKKRHSFEFL 118
>sp|A1JMN8|SYN_YERE8 Asparagine--tRNA ligase OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=asnS PE=3 SV=1
Length = 466
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GWV+ R+ K ++F V DGSCFD LQ +V E+ +TT
Sbjct: 24 GWVRT-RRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTT 70
>sp|Q0I2M9|SYN_HAES1 Asparagine--tRNA ligase OS=Haemophilus somnus (strain 129Pt)
GN=asnS PE=3 SV=1
Length = 467
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GW++ R+ K L+F + DGSCFD +Q +V + E+ ++TT
Sbjct: 25 GWIRT-RRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEILRLTT 71
>sp|B0UTU8|SYN_HAES2 Asparagine--tRNA ligase OS=Haemophilus somnus (strain 2336)
GN=asnS PE=3 SV=1
Length = 467
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GW++ R+ K L+F + DGSCFD +Q +V + E+ ++TT
Sbjct: 25 GWIRT-RRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEILRLTT 71
>sp|Q7VLL7|SYN_HAEDU Asparagine--tRNA ligase OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=asnS PE=3 SV=1
Length = 467
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVT 49
GWV+ R+ K L+F V DGSCF+ +QV++ + E+ ++T
Sbjct: 25 GWVRT-RRDSKAGLSFLTVYDGSCFEPIQVIINNDLANYQTEILRLT 70
>sp|B0BNV4|SYN_ACTPJ Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae
serotype 3 (strain JL03) GN=asnS PE=3 SV=1
Length = 467
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVT 49
GWV+ R+ K L+F V DGSCFD LQ ++ + E+ ++T
Sbjct: 25 GWVRT-RRDSKAGLSFLAVYDGSCFDPLQSIINNDLANYNDEVLRLT 70
>sp|Q9CN06|SYN_PASMU Asparagine--tRNA ligase OS=Pasteurella multocida (strain Pm70)
GN=asnS PE=3 SV=2
Length = 467
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GW++ R+ K L+F + DGSCFD +Q +V + E+ ++TT
Sbjct: 25 GWIRT-RRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEVLRLTT 71
>sp|A9NE58|SYN_ACHLI Asparagine--tRNA ligase OS=Acholeplasma laidlawii (strain PG-8A)
GN=asnS PE=3 SV=1
Length = 463
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLE 59
L GW++ R Q + F +NDGS F+N+QV+ ER + F T LS +E
Sbjct: 22 LKGWIRNHRDQKE--FGFINLNDGSFFENIQVVYER----ATTKDFDAVTRLSVGASIE 74
>sp|Q5E5P2|SYN_VIBF1 Asparagine--tRNA ligase OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=asnS PE=3 SV=1
Length = 466
Score = 36.2 bits (82), Expect = 0.065, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
GW++ R+ K ++F V DGSCFD +Q +V + E+ ++TT
Sbjct: 24 GWIR-SRRDSKAGISFLAVYDGSCFDPIQAVVPNDLNNYNDEVLKLTT 70
>sp|B8F3Y5|SYN_HAEPS Asparagine--tRNA ligase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=asnS PE=3 SV=1
Length = 467
Score = 36.2 bits (82), Expect = 0.068, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVT 49
GWV+ R+ K L+F V DGSCFD +Q ++ + E+ ++T
Sbjct: 25 GWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDLSNYQDEVLRLT 70
>sp|B0TUU1|SYN_SHEHH Asparagine--tRNA ligase OS=Shewanella halifaxensis (strain
HAW-EB4) GN=asnS PE=3 SV=1
Length = 466
Score = 35.8 bits (81), Expect = 0.077, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEKEL 62
GWV+ R+ K ++F V DGSCFD +Q +V N E+ ++T S + E+
Sbjct: 24 GWVR-SRRDSKAGISFLAVYDGSCFDPIQGVVPNNLENYTNEVLKLTAGCSVV--MTGEV 80
Query: 63 MKNPPPSEA 71
+++P +A
Sbjct: 81 VESPGKGQA 89
>sp|A8H467|SYN_SHEPA Asparagine--tRNA ligase OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=asnS PE=3 SV=1
Length = 466
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEKEL 62
GWV+ R+ K ++F V DGSCFD +Q +V N E+ ++T S + E+
Sbjct: 24 GWVR-SRRDSKAGISFLAVYDGSCFDPIQGVVPNNLENYTNEVLKLTAGCSVV--MTGEV 80
Query: 63 MKNPPPSEA 71
+++P +A
Sbjct: 81 VESPGQGQA 89
>sp|Q9KSF9|SYN_VIBCH Asparagine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=asnS PE=3 SV=2
Length = 466
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEAEKLEKEL 62
GW++ R+ K ++F + DGSCF+ +Q +V N E+ ++TT S ++ ++
Sbjct: 24 GWIRT-RRDSKAGISFLAIYDGSCFNPIQAVVPNNLNNYDNEVLKLTTGCS--VEVTGKI 80
Query: 63 MKNPPPSEADREAA 76
+++P +A AA
Sbjct: 81 VESPASGQAFELAA 94
>sp|Q5QZ13|SYN_IDILO Asparagine--tRNA ligase OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=asnS PE=3 SV=1
Length = 466
Score = 35.4 bits (80), Expect = 0.092, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTTLLSEA 55
GWV+ R+ K ++F ++DGSCFD +Q +V + E+ ++TT S A
Sbjct: 24 GWVRT-RRDSKAGISFINLHDGSCFDAIQAVVPAELPNYSNEVQKLTTGCSVA 75
>sp|Q15UN9|SYN_PSEA6 Asparagine--tRNA ligase OS=Pseudoalteromonas atlantica (strain
T6c / ATCC BAA-1087) GN=asnS PE=3 SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.099, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVL 33
+ GWV+ R+ K L+F ++DGSCFD +QV+
Sbjct: 22 VKGWVRT-RRDSKAGLSFVALHDGSCFDPIQVI 53
>sp|P57441|SYN_BUCAI Asparagine--tRNA ligase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=asnS PE=3 SV=1
Length = 466
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 1 LAGWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVTT 50
+ GWV+ R+ K +F + DGSCF+++QV+ E+ +TT
Sbjct: 22 VCGWVR-NRRSSKSGFSFITIYDGSCFNSIQVIANNTLPNYYKEILHLTT 70
>sp|Q73P19|SYN_TREDE Asparagine--tRNA ligase OS=Treponema denticola (strain ATCC 35405
/ CIP 103919 / DSM 14222) GN=asnS PE=3 SV=1
Length = 473
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERN 37
GWV+ R+ L F E+NDGSCF ++Q +R+
Sbjct: 22 GWVRTKRETKN--LVFIEINDGSCFASIQATFDRD 54
>sp|B3H198|SYN_ACTP7 Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae
serotype 7 (strain AP76) GN=asnS PE=3 SV=1
Length = 467
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 3 GWVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVERNGCGGAGEMFQVT 49
GWV+ R+ K L+F V DGSCFD +Q ++ + E+ ++T
Sbjct: 25 GWVRT-RRDSKAGLSFLAVYDGSCFDPIQSIINNDLANYNDEVLRLT 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,724,010
Number of Sequences: 539616
Number of extensions: 1396742
Number of successful extensions: 4084
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 3872
Number of HSP's gapped (non-prelim): 302
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)