BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047339
METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDAL
GVSHKLASIYDPVKRLFVTNLRTGATQETSLAGKSENGSGSQIHTSQKVTRDLGR

High Scoring Gene Products

Symbol, full name Information P value
AT4G38540 protein from Arabidopsis thaliana 3.0e-07
AT5G05320 protein from Arabidopsis thaliana 4.9e-07
MO1
monooxygenase 1
protein from Arabidopsis thaliana 0.00026
CTF2B
AT2G29720
protein from Arabidopsis thaliana 0.00072

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047339
        (115 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2121254 - symbol:AT4G38540 "AT4G38540" species...   125  3.0e-07   1
TAIR|locus:2153499 - symbol:AT5G05320 "AT5G05320" species...   123  4.9e-07   1
TAIR|locus:2130694 - symbol:MO1 "monooxygenase 1" species...    98  0.00026   1
TAIR|locus:2060584 - symbol:CTF2B "AT2G29720" species:370...    94  0.00072   1


>TAIR|locus:2121254 [details] [associations]
            symbol:AT4G38540 "AT4G38540" species:3702 "Arabidopsis
            thaliana" [GO:0004497 "monooxygenase activity" evidence=ISS]
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008152 "metabolic
            process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
            evidence=IEA] [GO:0050832 "defense response to fungus"
            evidence=IEP] [GO:0009407 "toxin catabolic process" evidence=RCA]
            [GO:0010583 "response to cyclopentenone" evidence=RCA]
            InterPro:IPR003042 PRINTS:PR00420 InterPro:IPR002938 Pfam:PF01494
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0050832 GO:GO:0004497
            eggNOG:COG0654 GO:GO:0055114 EMBL:AL161593 EMBL:AL035540
            EMBL:AJ007588 IPI:IPI00536424 PIR:T05682 RefSeq:NP_195566.1
            UniGene:At.483 ProteinModelPortal:O81816 SMR:O81816 STRING:O81816
            PaxDb:O81816 PRIDE:O81816 DNASU:830011 EnsemblPlants:AT4G38540.1
            GeneID:830011 KEGG:ath:AT4G38540 TAIR:At4g38540
            HOGENOM:HOG000239066 InParanoid:O81816 OMA:MAHATSL PhylomeDB:O81816
            ProtClustDB:CLSN2685436 ArrayExpress:O81816 Genevestigator:O81816
            Uniprot:O81816
        Length = 407

 Score = 125 (49.1 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 30/90 (33%), Positives = 44/90 (48%)

Query:     7 DVVXXXXXXXXXXXXXXXKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKL 66
             D++                RLGI+ +VLE S+ LR TG A     NAW A++ALGVS  +
Sbjct:     8 DIIIVGAGISGLSTAVGLHRLGIRSMVLESSETLRATGFAFTTWFNAWKAMEALGVSQHI 67

Query:    67 ASIYDPVKRLFVTNLRTGATQETSLAGKSE 96
              S++D ++   V  +  G      L  +SE
Sbjct:    68 RSLHDRLEGWVVGTISAGTPPTEMLFPESE 97


>TAIR|locus:2153499 [details] [associations]
            symbol:AT5G05320 "AT5G05320" species:3702 "Arabidopsis
            thaliana" [GO:0004497 "monooxygenase activity" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0009617 "response to bacterium"
            evidence=RCA] [GO:0045087 "innate immune response" evidence=RCA]
            InterPro:IPR003042 PRINTS:PR00420 InterPro:IPR002938 Pfam:PF01494
            EMBL:CP002688 GO:GO:0004497 GO:GO:0055114 EMBL:AB010692
            HOGENOM:HOG000239066 ProtClustDB:CLSN2685436 EMBL:BT003148
            EMBL:AK227657 IPI:IPI00537914 RefSeq:NP_196151.1 UniGene:At.28668
            ProteinModelPortal:Q9FLC2 SMR:Q9FLC2 PRIDE:Q9FLC2
            EnsemblPlants:AT5G05320.1 GeneID:830414 KEGG:ath:AT5G05320
            TAIR:At5g05320 InParanoid:Q9FLC2 OMA:EIRCVRR PhylomeDB:Q9FLC2
            Genevestigator:Q9FLC2 Uniprot:Q9FLC2
        Length = 406

 Score = 123 (48.4 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 29/91 (31%), Positives = 46/91 (50%)

Query:     6 KDVVXXXXXXXXXXXXXXXKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHK 65
             +D++                RLGI+ +VLE S+ LR TG A++   NAW A++ALG+S  
Sbjct:     7 QDIIIVGAGISGLATALGLHRLGIRSIVLESSEQLRATGFALSLYFNAWKAMEALGISQH 66

Query:    66 LASIYDPVKRLFVTNLRTGATQETSLAGKSE 96
             + S+ D  +   V  +  G   +  L  +SE
Sbjct:    67 IRSLGDRFQGWVVRPISAGDPPKEMLFPESE 97


>TAIR|locus:2130694 [details] [associations]
            symbol:MO1 "monooxygenase 1" species:3702 "Arabidopsis
            thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IDA] [GO:0009617 "response to bacterium" evidence=IEP]
            InterPro:IPR003042 PRINTS:PR00420 InterPro:IPR002938 Pfam:PF01494
            GO:GO:0005783 GO:GO:0009617 EMBL:CP002687 GO:GO:0004497
            GO:GO:0055114 IPI:IPI00546237 RefSeq:NP_193311.6 UniGene:At.21307
            ProteinModelPortal:F4JK84 SMR:F4JK84 PRIDE:F4JK84
            EnsemblPlants:AT4G15760.1 GeneID:827255 KEGG:ath:AT4G15760
            OMA:RAPSEIM Uniprot:F4JK84
        Length = 422

 Score = 98 (39.6 bits), Expect = 0.00026, P = 0.00026
 Identities = 22/58 (37%), Positives = 33/58 (56%)

Query:    26 RLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKL---ASIYDPVKRLFVTN 80
             R GIK +VLE+++ +R  GA I    N W ALD LGV  +L   +S+    + + + N
Sbjct:    49 RKGIKSVVLERAEKVRSEGAGIGTLSNGWRALDQLGVGDRLRLNSSLIHKARTMLIEN 106


>TAIR|locus:2060584 [details] [associations]
            symbol:CTF2B "AT2G29720" species:3702 "Arabidopsis
            thaliana" [GO:0004497 "monooxygenase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
            "oxidoreductase activity" evidence=IEA] InterPro:IPR003042
            PRINTS:PR00420 InterPro:IPR002938 Pfam:PF01494 EMBL:CP002685
            GO:GO:0004497 eggNOG:COG0654 GO:GO:0055114 EMBL:AC005496
            OMA:KVQYASI EMBL:AF360296 EMBL:AY051057 IPI:IPI00523204 PIR:G84699
            RefSeq:NP_565688.1 UniGene:At.10975 ProteinModelPortal:O82384
            SMR:O82384 PaxDb:O82384 PRIDE:O82384 EnsemblPlants:AT2G29720.1
            GeneID:817522 KEGG:ath:AT2G29720 TAIR:At2g29720 InParanoid:O82384
            PhylomeDB:O82384 ProtClustDB:CLSN2688553 ArrayExpress:O82384
            Genevestigator:O82384 Uniprot:O82384
        Length = 427

 Score = 94 (38.1 bits), Expect = 0.00072, P = 0.00072
 Identities = 20/62 (32%), Positives = 32/62 (51%)

Query:     5 EKDVVXXXXXXXXXXXXXXXKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSH 64
             E+ VV                RLGI+ +VLE+++ LR  GA++  + N W  LDA+ +  
Sbjct:    42 EEKVVIVGGGIGGLATAVALHRLGIRSVVLEQAESLRTGGASLTLSKNGWRVLDAISIGP 101

Query:    65 KL 66
             +L
Sbjct:   102 QL 103


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.131   0.362    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      115       100   0.00091  102 3  11 23  0.44    30
                                                     29  0.47    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  541 (58 KB)
  Total size of DFA:  98 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.68u 0.22s 9.90t   Elapsed:  00:00:00
  Total cpu time:  9.68u 0.22s 9.90t   Elapsed:  00:00:00
  Start:  Sat May 11 04:45:31 2013   End:  Sat May 11 04:45:31 2013

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