Query 047339
Match_columns 115
No_of_seqs 127 out of 1415
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 17:50:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047339.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047339hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 99.7 2.9E-16 1E-20 108.0 11.3 88 4-91 22-110 (407)
2 3c96_A Flavin-containing monoo 99.7 1E-15 3.4E-20 105.5 11.8 82 4-86 3-85 (410)
3 1pn0_A Phenol 2-monooxygenase; 99.7 1.2E-15 4.1E-20 111.0 11.8 79 4-82 7-90 (665)
4 2x3n_A Probable FAD-dependent 99.7 1.1E-15 3.9E-20 104.8 10.7 91 1-92 2-93 (399)
5 3alj_A 2-methyl-3-hydroxypyrid 99.6 4.8E-15 1.7E-19 101.2 11.5 84 5-90 11-95 (379)
6 2r0c_A REBC; flavin adenine di 99.6 6.6E-15 2.3E-19 105.1 12.4 88 4-91 25-116 (549)
7 2vou_A 2,6-dihydroxypyridine h 99.6 6E-15 2.1E-19 101.3 11.3 84 1-86 1-85 (397)
8 3ihg_A RDME; flavoenzyme, anth 99.6 1.9E-15 6.4E-20 107.4 8.3 74 1-74 1-74 (535)
9 2dkh_A 3-hydroxybenzoate hydro 99.6 1.5E-14 5.1E-19 104.9 11.8 77 5-81 32-109 (639)
10 2qa1_A PGAE, polyketide oxygen 99.6 1.1E-14 3.7E-19 103.0 8.8 67 3-69 9-75 (500)
11 3nix_A Flavoprotein/dehydrogen 99.6 4E-14 1.4E-18 97.5 11.2 89 1-92 1-90 (421)
12 2qa2_A CABE, polyketide oxygen 99.6 9.2E-15 3.1E-19 103.4 8.2 67 3-69 10-76 (499)
13 3fmw_A Oxygenase; mithramycin, 99.6 9.1E-15 3.1E-19 104.9 7.8 71 3-73 47-117 (570)
14 4hb9_A Similarities with proba 99.5 1.8E-14 6.3E-19 98.4 8.2 63 6-68 2-66 (412)
15 3kkj_A Amine oxidase, flavin-c 99.5 1.7E-14 5.8E-19 92.4 6.7 41 4-44 1-41 (336)
16 1k0i_A P-hydroxybenzoate hydro 99.5 1.3E-14 4.3E-19 99.4 6.4 77 4-80 1-79 (394)
17 3oz2_A Digeranylgeranylglycero 99.5 4.1E-14 1.4E-18 96.1 7.4 75 5-82 4-79 (397)
18 3i3l_A Alkylhalidase CMLS; fla 99.5 6.1E-13 2.1E-17 95.8 11.8 69 5-74 23-91 (591)
19 2xdo_A TETX2 protein; tetracyc 99.5 2.7E-13 9.1E-18 93.1 9.5 81 4-86 25-108 (398)
20 3e1t_A Halogenase; flavoprotei 99.5 5E-13 1.7E-17 94.6 10.6 89 3-92 5-95 (512)
21 2pyx_A Tryptophan halogenase; 99.4 3.5E-13 1.2E-17 95.7 8.0 80 1-81 3-97 (526)
22 2e4g_A Tryptophan halogenase; 99.4 2.3E-12 7.8E-17 92.0 8.8 80 1-81 21-107 (550)
23 2aqj_A Tryptophan halogenase, 99.4 3.1E-12 1.1E-16 91.0 8.6 64 1-65 1-68 (538)
24 3cgv_A Geranylgeranyl reductas 99.3 3.6E-12 1.2E-16 86.9 7.9 76 4-82 3-79 (397)
25 3i6d_A Protoporphyrinogen oxid 99.3 1.4E-12 4.9E-17 90.6 4.3 67 1-67 1-88 (470)
26 4gcm_A TRXR, thioredoxin reduc 99.3 3.1E-12 1E-16 85.1 5.4 38 1-38 2-39 (312)
27 2weu_A Tryptophan 5-halogenase 99.3 5.1E-12 1.8E-16 89.2 5.7 66 4-70 1-71 (511)
28 3c4a_A Probable tryptophan hyd 99.3 2.4E-12 8.2E-17 88.0 3.4 50 6-55 1-52 (381)
29 4gde_A UDP-galactopyranose mut 99.2 7.1E-12 2.4E-16 88.1 5.2 41 4-44 9-50 (513)
30 3atr_A Conserved archaeal prot 99.2 1E-11 3.6E-16 86.6 5.5 59 3-64 4-64 (453)
31 3ihm_A Styrene monooxygenase A 99.2 1.9E-11 6.4E-16 84.9 6.2 60 3-62 20-83 (430)
32 2yg5_A Putrescine oxidase; oxi 99.2 3.3E-11 1.1E-15 83.7 7.3 63 1-63 1-78 (453)
33 2ivd_A PPO, PPOX, protoporphyr 99.2 7.2E-11 2.5E-15 82.5 8.5 64 4-67 15-93 (478)
34 3fpz_A Thiazole biosynthetic e 99.2 3.2E-11 1.1E-15 80.9 6.4 60 4-63 64-132 (326)
35 2bry_A NEDD9 interacting prote 99.2 4.7E-11 1.6E-15 84.4 7.4 58 4-62 91-148 (497)
36 1yvv_A Amine oxidase, flavin-c 99.2 4.4E-11 1.5E-15 80.0 6.7 39 4-42 1-39 (336)
37 4a5l_A Thioredoxin reductase; 99.2 2.8E-11 9.7E-16 80.2 5.0 37 1-38 1-37 (314)
38 2gmh_A Electron transfer flavo 99.2 4.7E-11 1.6E-15 85.9 6.3 54 4-57 34-94 (584)
39 3nks_A Protoporphyrinogen oxid 99.2 4.1E-11 1.4E-15 83.7 5.9 63 5-67 2-85 (477)
40 4dgk_A Phytoene dehydrogenase; 99.2 3.4E-11 1.2E-15 84.6 5.0 40 6-45 2-41 (501)
41 1s3e_A Amine oxidase [flavin-c 99.1 1.3E-10 4.6E-15 82.2 7.3 60 4-63 3-78 (520)
42 1sez_A Protoporphyrinogen oxid 99.1 1.6E-10 5.6E-15 81.2 7.6 62 5-66 13-89 (504)
43 4fk1_A Putative thioredoxin re 99.1 6E-11 2E-15 78.7 5.1 36 4-39 5-40 (304)
44 2b9w_A Putative aminooxidase; 99.1 1.1E-10 3.8E-15 80.5 6.6 42 1-42 1-44 (424)
45 2vvm_A Monoamine oxidase N; FA 99.1 2.3E-10 7.9E-15 80.4 8.2 62 6-67 40-116 (495)
46 3v76_A Flavoprotein; structura 99.1 8.3E-11 2.8E-15 81.6 5.7 41 1-41 23-63 (417)
47 3k7m_X 6-hydroxy-L-nicotine ox 99.1 1.2E-10 4E-15 80.5 6.3 38 6-43 2-39 (431)
48 2jae_A L-amino acid oxidase; o 99.1 2.8E-10 9.7E-15 79.8 8.0 40 4-43 10-49 (489)
49 1v0j_A UDP-galactopyranose mut 99.1 1.3E-10 4.5E-15 80.1 6.0 39 5-43 7-46 (399)
50 3dme_A Conserved exported prot 99.1 1.3E-10 4.3E-15 78.3 5.8 36 4-39 3-38 (369)
51 3jsk_A Cypbp37 protein; octame 99.1 1.9E-10 6.5E-15 78.0 6.6 60 4-63 78-146 (344)
52 1rsg_A FMS1 protein; FAD bindi 99.1 1E-10 3.4E-15 82.8 5.4 40 4-43 7-47 (516)
53 2bcg_G Secretory pathway GDP d 99.1 2.1E-10 7.2E-15 80.2 6.4 42 5-46 11-52 (453)
54 1rp0_A ARA6, thiazole biosynth 99.1 2.5E-10 8.4E-15 75.4 6.4 38 4-41 38-76 (284)
55 2i0z_A NAD(FAD)-utilizing dehy 99.1 1.8E-10 6.1E-15 80.4 5.9 40 2-41 23-62 (447)
56 2e1m_A L-glutamate oxidase; L- 99.1 3.8E-10 1.3E-14 77.4 7.3 39 4-42 43-82 (376)
57 3lov_A Protoporphyrinogen oxid 99.1 2.7E-10 9.3E-15 79.6 6.4 63 5-67 4-83 (475)
58 1c0p_A D-amino acid oxidase; a 99.1 2E-10 7E-15 77.7 5.6 39 1-39 2-40 (363)
59 3dje_A Fructosyl amine: oxygen 99.1 3.4E-10 1.2E-14 78.4 6.5 38 4-41 5-43 (438)
60 3da1_A Glycerol-3-phosphate de 99.1 1.7E-10 5.9E-15 82.6 5.1 40 2-41 15-54 (561)
61 3nrn_A Uncharacterized protein 99.0 3.1E-10 1.1E-14 78.3 6.2 39 6-44 1-39 (421)
62 2oln_A NIKD protein; flavoprot 99.0 2.6E-10 8.9E-15 78.0 5.6 36 5-40 4-39 (397)
63 3ka7_A Oxidoreductase; structu 99.0 2.9E-10 9.9E-15 78.3 5.9 39 6-44 1-39 (425)
64 1y56_B Sarcosine oxidase; dehy 99.0 3.8E-10 1.3E-14 76.7 6.3 39 1-39 1-39 (382)
65 2zbw_A Thioredoxin reductase; 99.0 3E-10 1E-14 75.9 5.5 41 1-41 1-41 (335)
66 2gf3_A MSOX, monomeric sarcosi 99.0 3.9E-10 1.3E-14 76.7 6.0 38 4-41 2-39 (389)
67 2uzz_A N-methyl-L-tryptophan o 99.0 2.6E-10 9E-15 77.2 5.0 37 4-40 1-37 (372)
68 4at0_A 3-ketosteroid-delta4-5a 99.0 3.2E-10 1.1E-14 80.3 5.4 39 4-42 40-78 (510)
69 1d5t_A Guanine nucleotide diss 99.0 1.2E-09 4E-14 76.1 7.3 44 4-47 5-48 (433)
70 4dna_A Probable glutathione re 99.0 3.2E-10 1.1E-14 79.3 4.5 37 1-37 1-37 (463)
71 3hdq_A UDP-galactopyranose mut 99.0 7E-10 2.4E-14 76.6 6.1 40 4-43 28-67 (397)
72 2gag_B Heterotetrameric sarcos 99.0 5.8E-10 2E-14 76.2 5.7 39 2-40 18-58 (405)
73 1ryi_A Glycine oxidase; flavop 99.0 6.2E-10 2.1E-14 75.6 5.8 37 4-40 16-52 (382)
74 2gjc_A Thiazole biosynthetic e 99.0 8.9E-10 3E-14 74.3 6.4 59 4-62 64-131 (326)
75 3fbs_A Oxidoreductase; structu 99.0 5.4E-10 1.9E-14 73.3 5.2 36 4-39 1-36 (297)
76 2gqf_A Hypothetical protein HI 99.0 5.8E-10 2E-14 77.0 5.4 37 4-40 3-39 (401)
77 3c4n_A Uncharacterized protein 99.0 5.4E-10 1.9E-14 76.9 5.3 37 4-40 35-73 (405)
78 3nyc_A D-arginine dehydrogenas 99.0 4E-10 1.4E-14 76.3 4.5 37 3-40 7-43 (381)
79 3urh_A Dihydrolipoyl dehydroge 99.0 4.4E-10 1.5E-14 79.2 4.7 41 3-43 23-63 (491)
80 3o0h_A Glutathione reductase; 99.0 6.3E-10 2.1E-14 78.3 5.4 34 4-37 25-58 (484)
81 2iid_A L-amino-acid oxidase; f 99.0 1.5E-09 5E-14 76.3 7.2 40 4-43 32-71 (498)
82 1qo8_A Flavocytochrome C3 fuma 99.0 4.2E-10 1.4E-14 80.6 4.5 40 3-42 119-158 (566)
83 2cul_A Glucose-inhibited divis 99.0 9.5E-10 3.3E-14 70.6 5.4 35 4-38 2-36 (232)
84 3itj_A Thioredoxin reductase 1 99.0 6.8E-10 2.3E-14 74.0 4.7 36 3-38 20-55 (338)
85 2gv8_A Monooxygenase; FMO, FAD 98.9 1.1E-09 3.6E-14 76.4 5.7 39 3-41 4-44 (447)
86 4dsg_A UDP-galactopyranose mut 98.9 1.3E-09 4.5E-14 76.8 6.2 42 3-44 7-49 (484)
87 3qj4_A Renalase; FAD/NAD(P)-bi 98.9 7.7E-10 2.6E-14 74.4 4.6 37 6-42 2-41 (342)
88 3ic9_A Dihydrolipoamide dehydr 98.9 6.6E-10 2.3E-14 78.4 4.3 38 1-38 4-41 (492)
89 3f8d_A Thioredoxin reductase ( 98.9 1.1E-09 3.8E-14 72.5 5.1 34 4-37 14-47 (323)
90 3l8k_A Dihydrolipoyl dehydroge 98.9 6.9E-10 2.4E-14 77.8 4.3 40 4-43 3-42 (466)
91 1y0p_A Fumarate reductase flav 98.9 1.4E-09 4.9E-14 77.9 6.0 39 4-42 125-163 (571)
92 4a9w_A Monooxygenase; baeyer-v 98.9 1.1E-09 3.9E-14 73.2 5.2 37 5-41 3-39 (357)
93 1i8t_A UDP-galactopyranose mut 98.9 1.5E-09 5.1E-14 74.1 5.7 38 6-43 2-39 (367)
94 3pvc_A TRNA 5-methylaminomethy 98.9 1.9E-09 6.5E-14 78.9 6.3 36 5-40 264-299 (689)
95 1chu_A Protein (L-aspartate ox 98.9 1.3E-09 4.5E-14 77.8 5.3 37 4-41 7-43 (540)
96 2rgh_A Alpha-glycerophosphate 98.9 1.2E-09 4E-14 78.5 4.8 37 4-40 31-67 (571)
97 3lzw_A Ferredoxin--NADP reduct 98.9 1.3E-09 4.5E-14 72.5 4.7 37 5-41 7-43 (332)
98 3cty_A Thioredoxin reductase; 98.9 1.6E-09 5.5E-14 72.1 5.1 34 4-37 15-48 (319)
99 2bs2_A Quinol-fumarate reducta 98.9 1.3E-09 4.3E-14 79.6 4.8 40 1-40 1-40 (660)
100 3ab1_A Ferredoxin--NADP reduct 98.9 2.1E-09 7.3E-14 72.6 5.6 37 5-41 14-50 (360)
101 3lad_A Dihydrolipoamide dehydr 98.9 2.3E-09 7.8E-14 75.2 5.7 36 4-39 2-37 (476)
102 1vdc_A NTR, NADPH dependent th 98.9 1.2E-09 4E-14 73.0 4.0 33 4-36 7-39 (333)
103 1kf6_A Fumarate reductase flav 98.9 1.2E-09 4E-14 79.0 4.2 40 1-40 1-42 (602)
104 2qcu_A Aerobic glycerol-3-phos 98.9 3.3E-09 1.1E-13 75.0 6.1 36 5-40 3-38 (501)
105 3nlc_A Uncharacterized protein 98.9 2.1E-09 7.3E-14 76.9 5.1 36 4-39 106-141 (549)
106 2wdq_A Succinate dehydrogenase 98.9 1.7E-09 5.9E-14 77.9 4.6 37 4-40 6-42 (588)
107 3ps9_A TRNA 5-methylaminomethy 98.9 2.8E-09 9.5E-14 77.8 5.7 36 5-40 272-307 (676)
108 2bi7_A UDP-galactopyranose mut 98.9 3.4E-09 1.2E-13 72.7 5.8 38 5-42 3-40 (384)
109 1trb_A Thioredoxin reductase; 98.9 1.8E-09 6.3E-14 71.6 4.3 35 3-37 3-37 (320)
110 3r9u_A Thioredoxin reductase; 98.9 2.5E-09 8.7E-14 70.6 4.9 35 3-37 2-37 (315)
111 1ojt_A Surface protein; redox- 98.9 1.3E-09 4.4E-14 76.7 3.4 39 4-42 5-43 (482)
112 2qae_A Lipoamide, dihydrolipoy 98.8 2.5E-09 8.4E-14 74.9 4.6 39 4-42 1-39 (468)
113 2xve_A Flavin-containing monoo 98.8 4.1E-09 1.4E-13 73.9 5.6 37 5-41 2-44 (464)
114 1w4x_A Phenylacetone monooxyge 98.8 4.6E-09 1.6E-13 74.9 5.9 38 4-41 15-52 (542)
115 3uox_A Otemo; baeyer-villiger 98.8 5E-09 1.7E-13 74.9 5.9 38 4-41 8-45 (545)
116 3dk9_A Grase, GR, glutathione 98.8 3.8E-09 1.3E-13 74.2 5.1 35 4-38 19-53 (478)
117 2q7v_A Thioredoxin reductase; 98.8 4.4E-09 1.5E-13 70.1 5.1 33 5-37 8-40 (325)
118 2ywl_A Thioredoxin reductase r 98.8 5.2E-09 1.8E-13 64.4 5.1 35 6-40 2-36 (180)
119 2hqm_A GR, grase, glutathione 98.8 3.7E-09 1.3E-13 74.3 4.9 34 5-38 11-44 (479)
120 2eq6_A Pyruvate dehydrogenase 98.8 4E-09 1.4E-13 73.9 5.1 38 1-38 1-39 (464)
121 3dgz_A Thioredoxin reductase 2 98.8 4.4E-09 1.5E-13 74.1 5.3 35 3-37 4-38 (488)
122 1dxl_A Dihydrolipoamide dehydr 98.8 5.1E-09 1.8E-13 73.3 5.5 40 4-43 5-44 (470)
123 1onf_A GR, grase, glutathione 98.8 5E-09 1.7E-13 74.0 5.4 35 4-38 1-35 (500)
124 3g3e_A D-amino-acid oxidase; F 98.8 2.7E-09 9.3E-14 71.9 3.8 34 6-39 1-40 (351)
125 2vdc_G Glutamate synthase [NAD 98.8 6.4E-09 2.2E-13 72.9 5.8 38 4-41 121-158 (456)
126 1v59_A Dihydrolipoamide dehydr 98.8 2.4E-09 8.3E-14 75.1 3.7 38 4-41 4-41 (478)
127 3axb_A Putative oxidoreductase 98.8 3.9E-09 1.3E-13 73.3 4.6 34 4-37 22-56 (448)
128 3gwf_A Cyclohexanone monooxyge 98.8 4.8E-09 1.7E-13 74.9 5.2 38 4-41 7-45 (540)
129 4ap3_A Steroid monooxygenase; 98.8 5.7E-09 2E-13 74.7 5.5 38 4-41 20-57 (549)
130 3p1w_A Rabgdi protein; GDI RAB 98.8 7.7E-09 2.6E-13 72.9 5.9 41 4-44 19-59 (475)
131 3d1c_A Flavin-containing putat 98.8 5.7E-09 1.9E-13 70.5 5.1 34 5-38 4-38 (369)
132 1zmd_A Dihydrolipoyl dehydroge 98.8 4.8E-09 1.6E-13 73.6 4.8 40 3-42 4-43 (474)
133 3gyx_A Adenylylsulfate reducta 98.8 5.7E-09 2E-13 76.2 5.1 37 4-40 21-63 (662)
134 1mo9_A ORF3; nucleotide bindin 98.8 8.2E-09 2.8E-13 73.3 5.8 39 4-42 42-80 (523)
135 2a87_A TRXR, TR, thioredoxin r 98.8 5.5E-09 1.9E-13 70.0 4.5 34 4-37 13-46 (335)
136 2h88_A Succinate dehydrogenase 98.8 4.7E-09 1.6E-13 76.1 4.4 37 4-40 17-53 (621)
137 3qfa_A Thioredoxin reductase 1 98.8 8.6E-09 2.9E-13 73.2 5.6 34 5-38 32-65 (519)
138 3s5w_A L-ornithine 5-monooxyge 98.8 5.1E-09 1.8E-13 73.0 4.3 37 5-41 30-71 (463)
139 2yqu_A 2-oxoglutarate dehydrog 98.8 5.6E-09 1.9E-13 72.9 4.5 38 5-42 1-38 (455)
140 2q0l_A TRXR, thioredoxin reduc 98.8 8.5E-09 2.9E-13 68.2 5.0 33 6-38 2-35 (311)
141 2r9z_A Glutathione amide reduc 98.8 8.9E-09 3.1E-13 72.1 5.3 35 4-38 3-37 (463)
142 1ges_A Glutathione reductase; 98.8 7.6E-09 2.6E-13 72.2 4.8 35 4-38 3-37 (450)
143 2zxi_A TRNA uridine 5-carboxym 98.8 9.6E-09 3.3E-13 74.5 5.4 35 4-38 26-60 (637)
144 3k30_A Histamine dehydrogenase 98.8 9.3E-09 3.2E-13 75.3 5.4 39 4-42 390-428 (690)
145 3oc4_A Oxidoreductase, pyridin 98.8 8.3E-09 2.8E-13 72.0 4.8 37 5-41 2-40 (452)
146 1zk7_A HGII, reductase, mercur 98.8 1.1E-08 3.6E-13 71.7 5.3 34 4-37 3-36 (467)
147 3dgh_A TRXR-1, thioredoxin red 98.7 1.2E-08 3.9E-13 71.8 5.5 33 4-36 8-40 (483)
148 2a8x_A Dihydrolipoyl dehydroge 98.7 8.5E-09 2.9E-13 72.1 4.7 33 5-37 3-35 (464)
149 3ces_A MNMG, tRNA uridine 5-ca 98.7 1E-08 3.5E-13 74.6 5.2 34 5-38 28-61 (651)
150 1b37_A Protein (polyamine oxid 98.7 1.7E-08 5.7E-13 70.7 6.2 41 3-43 2-43 (472)
151 3cp8_A TRNA uridine 5-carboxym 98.7 1E-08 3.6E-13 74.4 5.1 35 4-38 20-54 (641)
152 1xdi_A RV3303C-LPDA; reductase 98.7 6.9E-09 2.3E-13 73.3 3.9 35 4-38 1-38 (499)
153 3pl8_A Pyranose 2-oxidase; sub 98.7 1.4E-08 4.7E-13 73.7 5.5 38 5-42 46-83 (623)
154 1ebd_A E3BD, dihydrolipoamide 98.7 1.4E-08 4.7E-13 70.9 5.1 34 4-37 2-35 (455)
155 3g5s_A Methylenetetrahydrofola 98.7 2.3E-08 8E-13 69.1 6.0 34 6-39 2-35 (443)
156 1fl2_A Alkyl hydroperoxide red 98.7 1.4E-08 4.9E-13 67.1 4.8 33 5-37 1-33 (310)
157 1pj5_A N,N-dimethylglycine oxi 98.7 1.6E-08 5.6E-13 75.3 5.5 36 4-39 3-39 (830)
158 3h28_A Sulfide-quinone reducta 98.7 1.6E-08 5.4E-13 70.2 5.1 36 5-40 2-39 (430)
159 1o94_A Tmadh, trimethylamine d 98.7 2.2E-08 7.4E-13 73.8 6.0 38 5-42 389-426 (729)
160 1jnr_A Adenylylsulfate reducta 98.7 1.9E-08 6.5E-13 73.2 5.4 36 4-39 21-60 (643)
161 2e5v_A L-aspartate oxidase; ar 98.7 2.6E-08 8.9E-13 70.1 5.9 31 7-37 1-31 (472)
162 1fec_A Trypanothione reductase 98.7 1.7E-08 5.8E-13 71.2 4.9 32 4-35 2-34 (490)
163 1q1r_A Putidaredoxin reductase 98.7 2.6E-08 8.8E-13 69.2 5.6 38 3-40 2-41 (431)
164 1lvl_A Dihydrolipoamide dehydr 98.7 2.1E-08 7.1E-13 70.2 4.9 34 4-37 4-37 (458)
165 3lxd_A FAD-dependent pyridine 98.7 2.8E-08 9.6E-13 68.6 5.5 37 4-40 8-46 (415)
166 2wpf_A Trypanothione reductase 98.7 1.3E-08 4.5E-13 71.9 3.8 31 5-35 7-38 (495)
167 1d4d_A Flavocytochrome C fumar 98.7 2.8E-08 9.7E-13 71.3 5.6 38 4-41 125-162 (572)
168 3sx6_A Sulfide-quinone reducta 98.7 1.7E-08 5.9E-13 70.1 4.1 38 1-39 1-41 (437)
169 1kdg_A CDH, cellobiose dehydro 98.7 3.3E-08 1.1E-12 70.5 5.6 37 4-40 6-42 (546)
170 4b1b_A TRXR, thioredoxin reduc 98.7 2.7E-08 9.4E-13 71.1 5.1 35 4-38 41-75 (542)
171 2z3y_A Lysine-specific histone 98.7 3.8E-08 1.3E-12 71.8 5.9 38 5-42 107-144 (662)
172 1ps9_A 2,4-dienoyl-COA reducta 98.7 3.5E-08 1.2E-12 72.0 5.7 38 5-42 373-410 (671)
173 2gqw_A Ferredoxin reductase; f 98.6 3.8E-08 1.3E-12 67.9 5.5 37 4-40 6-44 (408)
174 3t37_A Probable dehydrogenase; 98.6 2.5E-08 8.4E-13 70.6 4.6 36 4-39 16-52 (526)
175 3iwa_A FAD-dependent pyridine 98.6 1.8E-08 6.2E-13 70.6 3.9 36 5-40 3-40 (472)
176 3kd9_A Coenzyme A disulfide re 98.6 3.3E-08 1.1E-12 68.9 5.1 37 5-41 3-41 (449)
177 3ics_A Coenzyme A-disulfide re 98.6 3.2E-08 1.1E-12 71.1 5.1 37 4-40 35-73 (588)
178 2xag_A Lysine-specific histone 98.6 6E-08 2E-12 72.6 6.4 38 5-42 278-315 (852)
179 3ef6_A Toluene 1,2-dioxygenase 98.6 4.6E-08 1.6E-12 67.5 5.4 36 5-40 2-39 (410)
180 1y56_A Hypothetical protein PH 98.6 1.7E-08 5.8E-13 71.3 3.3 38 4-42 107-144 (493)
181 2v3a_A Rubredoxin reductase; a 98.6 4.4E-08 1.5E-12 67.0 5.2 36 4-39 3-40 (384)
182 2bc0_A NADH oxidase; flavoprot 98.6 3E-08 1E-12 69.9 4.5 37 4-40 34-73 (490)
183 4gut_A Lysine-specific histone 98.6 5E-08 1.7E-12 72.4 5.6 38 5-42 336-373 (776)
184 2x8g_A Thioredoxin glutathione 98.6 4.4E-08 1.5E-12 70.6 5.1 34 4-37 106-139 (598)
185 1hyu_A AHPF, alkyl hydroperoxi 98.6 5.2E-08 1.8E-12 69.3 5.4 34 4-37 211-244 (521)
186 3fg2_P Putative rubredoxin red 98.6 6E-08 2.1E-12 66.7 5.4 36 5-40 1-38 (404)
187 3h8l_A NADH oxidase; membrane 98.6 4.1E-08 1.4E-12 67.6 4.5 34 6-39 2-38 (409)
188 1gte_A Dihydropyrimidine dehyd 98.6 6.9E-08 2.4E-12 73.5 5.8 38 5-42 187-225 (1025)
189 1lqt_A FPRA; NADP+ derivative, 98.6 4.9E-08 1.7E-12 68.4 4.5 37 5-41 3-46 (456)
190 2gag_A Heterotetrameric sarcos 98.6 6.4E-08 2.2E-12 73.3 5.3 38 5-42 128-165 (965)
191 2cdu_A NADPH oxidase; flavoenz 98.6 7.1E-08 2.4E-12 67.2 4.8 35 6-40 1-37 (452)
192 1cjc_A Protein (adrenodoxin re 98.5 9.4E-08 3.2E-12 67.1 5.1 38 4-41 5-44 (460)
193 3hyw_A Sulfide-quinone reducta 98.5 8.6E-08 2.9E-12 66.6 4.7 36 4-39 1-38 (430)
194 3q9t_A Choline dehydrogenase a 98.5 8.7E-08 3E-12 69.0 4.8 36 4-39 5-41 (577)
195 1ju2_A HydroxynitrIle lyase; f 98.5 4.6E-08 1.6E-12 69.8 3.3 35 4-39 25-59 (536)
196 1nhp_A NADH peroxidase; oxidor 98.5 1E-07 3.5E-12 66.4 4.8 35 6-40 1-37 (447)
197 1vg0_A RAB proteins geranylger 98.5 3.6E-07 1.2E-11 66.5 7.2 57 4-61 7-63 (650)
198 3cgb_A Pyridine nucleotide-dis 98.5 1.4E-07 4.7E-12 66.4 4.8 35 6-40 37-73 (480)
199 3ntd_A FAD-dependent pyridine 98.5 1.4E-07 4.9E-12 67.3 5.0 36 6-41 2-39 (565)
200 1xhc_A NADH oxidase /nitrite r 98.5 1.3E-07 4.5E-12 64.5 4.4 34 6-40 9-42 (367)
201 2jbv_A Choline oxidase; alcoho 98.5 1.6E-07 5.6E-12 67.1 5.0 40 1-40 9-49 (546)
202 3qvp_A Glucose oxidase; oxidor 98.5 1.5E-07 5.3E-12 67.8 4.9 35 4-38 18-53 (583)
203 1gpe_A Protein (glucose oxidas 98.5 2.1E-07 7.2E-12 67.1 5.5 38 3-40 22-60 (587)
204 1m6i_A Programmed cell death p 98.4 2E-07 6.9E-12 65.8 4.9 36 5-40 11-48 (493)
205 3ayj_A Pro-enzyme of L-phenyla 98.4 1.3E-07 4.3E-12 69.7 3.9 36 5-40 56-100 (721)
206 3klj_A NAD(FAD)-dependent dehy 98.4 3.1E-07 1.1E-11 63.0 5.3 37 4-40 8-44 (385)
207 3vrd_B FCCB subunit, flavocyto 98.4 2.5E-07 8.5E-12 63.4 4.5 34 6-39 3-38 (401)
208 1n4w_A CHOD, cholesterol oxida 98.4 4.1E-07 1.4E-11 64.5 5.5 38 3-40 3-40 (504)
209 4g6h_A Rotenone-insensitive NA 98.4 2.2E-07 7.6E-12 65.8 4.0 36 4-39 41-76 (502)
210 3fim_B ARYL-alcohol oxidase; A 98.4 1.5E-07 5.1E-12 67.7 2.9 36 5-40 2-38 (566)
211 4eqs_A Coenzyme A disulfide re 98.4 2.9E-07 1E-11 64.1 4.2 35 6-40 1-37 (437)
212 1coy_A Cholesterol oxidase; ox 98.4 6.1E-07 2.1E-11 63.6 5.5 36 4-39 10-45 (507)
213 1nhp_A NADH peroxidase; oxidor 98.1 2.9E-06 9.9E-11 59.1 4.8 38 4-41 148-185 (447)
214 3klj_A NAD(FAD)-dependent dehy 98.1 3.6E-06 1.2E-10 57.8 4.9 58 5-62 146-203 (385)
215 3fwz_A Inner membrane protein 98.0 8.9E-06 3E-10 48.1 5.0 37 3-39 5-41 (140)
216 1v59_A Dihydrolipoamide dehydr 98.0 1.1E-05 3.8E-10 56.5 5.8 58 5-63 183-240 (478)
217 1lvl_A Dihydrolipoamide dehydr 98.0 8.6E-06 2.9E-10 57.0 5.2 58 5-63 171-228 (458)
218 2gqw_A Ferredoxin reductase; f 98.0 1E-05 3.5E-10 55.8 5.3 59 5-63 145-203 (408)
219 4b63_A L-ornithine N5 monooxyg 98.0 1.5E-06 5.2E-11 61.5 1.2 36 5-40 39-88 (501)
220 2v3a_A Rubredoxin reductase; a 98.0 9.1E-06 3.1E-10 55.5 5.0 59 5-63 145-203 (384)
221 1ebd_A E3BD, dihydrolipoamide 98.0 1.3E-05 4.4E-10 55.9 5.8 58 5-63 170-227 (455)
222 2eq6_A Pyruvate dehydrogenase 98.0 1.1E-05 3.8E-10 56.5 5.3 58 5-63 169-226 (464)
223 1xhc_A NADH oxidase /nitrite r 98.0 8.4E-06 2.9E-10 55.5 4.5 36 6-41 144-179 (367)
224 2yqu_A 2-oxoglutarate dehydrog 97.9 1.5E-05 5.1E-10 55.6 5.7 36 5-40 167-202 (455)
225 1zmd_A Dihydrolipoyl dehydroge 97.9 1.9E-05 6.5E-10 55.3 5.9 59 5-63 178-236 (474)
226 2bc0_A NADH oxidase; flavoprot 97.9 1.5E-05 5.2E-10 56.1 5.4 59 5-63 194-252 (490)
227 2g1u_A Hypothetical protein TM 97.9 1.8E-05 6.3E-10 47.5 4.9 35 5-39 19-53 (155)
228 3llv_A Exopolyphosphatase-rela 97.9 1.9E-05 6.5E-10 46.5 4.7 34 6-39 7-40 (141)
229 1q1r_A Putidaredoxin reductase 97.8 2.3E-05 8E-10 54.4 5.2 59 5-63 149-207 (431)
230 4gcm_A TRXR, thioredoxin reduc 97.8 2.5E-05 8.5E-10 51.6 5.1 35 6-40 146-180 (312)
231 1ges_A Glutathione reductase; 97.8 3.1E-05 1.1E-09 54.0 5.6 36 5-40 167-202 (450)
232 3ic5_A Putative saccharopine d 97.8 2.9E-05 9.8E-10 44.0 4.5 36 3-38 3-39 (118)
233 1id1_A Putative potassium chan 97.8 4.7E-05 1.6E-09 45.5 5.6 34 5-38 3-36 (153)
234 2a8x_A Dihydrolipoyl dehydroge 97.8 3.3E-05 1.1E-09 54.0 5.6 58 5-63 171-228 (464)
235 2cdu_A NADPH oxidase; flavoenz 97.8 2.7E-05 9.3E-10 54.2 5.2 59 5-63 149-207 (452)
236 2hmt_A YUAA protein; RCK, KTN, 97.8 3.5E-05 1.2E-09 45.1 4.9 33 6-38 7-39 (144)
237 3i83_A 2-dehydropantoate 2-red 97.8 2.9E-05 9.8E-10 52.0 5.0 34 5-38 2-35 (320)
238 1pzg_A LDH, lactate dehydrogen 97.8 3.7E-05 1.3E-09 51.9 5.2 39 1-39 5-44 (331)
239 1dxl_A Dihydrolipoamide dehydr 97.8 2.5E-05 8.4E-10 54.6 4.5 58 5-63 177-234 (470)
240 1lss_A TRK system potassium up 97.8 4.4E-05 1.5E-09 44.5 4.8 33 6-38 5-37 (140)
241 2r9z_A Glutathione amide reduc 97.7 5.6E-05 1.9E-09 52.9 5.8 36 5-40 166-201 (463)
242 3k96_A Glycerol-3-phosphate de 97.7 4.7E-05 1.6E-09 51.9 5.3 38 1-38 25-62 (356)
243 4b1b_A TRXR, thioredoxin reduc 97.7 5E-05 1.7E-09 54.4 5.6 60 2-63 220-279 (542)
244 1zk7_A HGII, reductase, mercur 97.7 6E-05 2.1E-09 52.7 5.9 57 5-63 176-232 (467)
245 3hn2_A 2-dehydropantoate 2-red 97.7 3.7E-05 1.3E-09 51.3 4.4 34 5-38 2-35 (312)
246 3ef6_A Toluene 1,2-dioxygenase 97.7 2.7E-05 9.4E-10 53.6 3.8 36 5-40 143-178 (410)
247 3lxd_A FAD-dependent pyridine 97.7 5.6E-05 1.9E-09 52.1 5.4 59 5-63 152-210 (415)
248 4eqs_A Coenzyme A disulfide re 97.7 6.9E-05 2.4E-09 52.2 5.8 58 5-63 147-204 (437)
249 3cgb_A Pyridine nucleotide-dis 97.7 2.8E-05 9.6E-10 54.6 3.9 38 4-41 185-222 (480)
250 3fg2_P Putative rubredoxin red 97.7 5.8E-05 2E-09 51.9 5.3 59 5-63 142-200 (404)
251 3g17_A Similar to 2-dehydropan 97.7 4.8E-05 1.6E-09 50.3 4.6 34 5-38 2-35 (294)
252 4a5l_A Thioredoxin reductase; 97.7 5.2E-05 1.8E-09 49.9 4.7 36 5-40 152-187 (314)
253 2hqm_A GR, grase, glutathione 97.7 7.4E-05 2.5E-09 52.5 5.6 59 4-63 184-242 (479)
254 1onf_A GR, grase, glutathione 97.7 6.2E-05 2.1E-09 53.2 5.1 58 5-63 176-233 (500)
255 1f0y_A HCDH, L-3-hydroxyacyl-C 97.7 7.8E-05 2.7E-09 49.4 5.3 33 6-38 16-48 (302)
256 2qyt_A 2-dehydropantoate 2-red 97.7 3.8E-05 1.3E-09 50.9 3.7 36 1-36 4-45 (317)
257 2dpo_A L-gulonate 3-dehydrogen 97.7 5.6E-05 1.9E-09 50.8 4.5 39 1-39 1-40 (319)
258 3dk9_A Grase, GR, glutathione 97.6 0.0001 3.4E-09 51.7 5.8 59 4-63 186-244 (478)
259 2qae_A Lipoamide, dihydrolipoy 97.6 0.00011 3.6E-09 51.5 5.8 58 5-63 174-232 (468)
260 3ntd_A FAD-dependent pyridine 97.6 8.4E-05 2.9E-09 53.0 5.3 58 5-63 151-208 (565)
261 3oc4_A Oxidoreductase, pyridin 97.6 7.5E-05 2.6E-09 52.0 4.8 58 5-62 147-204 (452)
262 3c85_A Putative glutathione-re 97.6 0.00011 3.9E-09 45.1 5.1 35 5-39 39-74 (183)
263 3ghy_A Ketopantoate reductase 97.6 0.00011 3.7E-09 49.5 5.3 32 6-37 4-35 (335)
264 1ojt_A Surface protein; redox- 97.6 0.00011 3.7E-09 51.7 5.2 37 5-41 185-221 (482)
265 4e12_A Diketoreductase; oxidor 97.6 0.00014 4.7E-09 47.9 5.4 34 6-39 5-38 (283)
266 3l4b_C TRKA K+ channel protien 97.6 7.5E-05 2.6E-09 47.2 3.9 33 7-39 2-34 (218)
267 3ic9_A Dihydrolipoamide dehydr 97.6 0.00017 6E-09 50.8 6.1 38 4-41 173-210 (492)
268 1xdi_A RV3303C-LPDA; reductase 97.5 0.00018 6.2E-09 50.7 6.1 58 5-63 182-239 (499)
269 3lad_A Dihydrolipoamide dehydr 97.5 0.00014 4.9E-09 50.9 5.5 59 4-63 179-237 (476)
270 3gg2_A Sugar dehydrogenase, UD 97.5 0.00012 4.1E-09 51.4 4.9 33 6-38 3-35 (450)
271 3ego_A Probable 2-dehydropanto 97.5 0.00012 4.3E-09 48.7 4.7 33 5-38 2-34 (307)
272 2x8g_A Thioredoxin glutathione 97.5 0.00021 7.1E-09 51.5 6.1 33 5-37 286-318 (598)
273 3urh_A Dihydrolipoyl dehydroge 97.5 0.00016 5.4E-09 50.9 5.4 58 5-63 198-255 (491)
274 1z82_A Glycerol-3-phosphate de 97.5 0.00014 4.9E-09 48.8 5.0 35 4-38 13-47 (335)
275 2ew2_A 2-dehydropantoate 2-red 97.5 0.00014 4.8E-09 48.0 4.8 33 6-38 4-36 (316)
276 3dgz_A Thioredoxin reductase 2 97.5 0.00024 8.2E-09 50.0 6.0 58 4-63 184-241 (488)
277 2ewd_A Lactate dehydrogenase,; 97.5 0.00017 5.9E-09 48.2 5.1 35 5-39 4-39 (317)
278 1lld_A L-lactate dehydrogenase 97.5 0.00017 5.7E-09 48.1 5.0 34 5-38 7-42 (319)
279 3iwa_A FAD-dependent pyridine 97.5 0.00015 5.2E-09 50.7 4.9 59 5-63 159-218 (472)
280 3ics_A Coenzyme A-disulfide re 97.5 0.00018 6E-09 51.8 5.4 58 5-63 187-244 (588)
281 3qfa_A Thioredoxin reductase 1 97.5 0.00025 8.5E-09 50.4 6.0 58 4-63 209-266 (519)
282 3g0o_A 3-hydroxyisobutyrate de 97.5 0.00018 6E-09 47.8 4.9 35 4-38 6-40 (303)
283 4g65_A TRK system potassium up 97.5 4.9E-05 1.7E-09 53.5 2.3 35 5-39 3-37 (461)
284 1y6j_A L-lactate dehydrogenase 97.5 0.00019 6.6E-09 48.1 5.0 35 4-38 6-42 (318)
285 2wpf_A Trypanothione reductase 97.5 0.00021 7.1E-09 50.5 5.4 58 5-63 191-251 (495)
286 3tl2_A Malate dehydrogenase; c 97.5 0.00021 7.3E-09 47.9 5.2 37 1-37 4-41 (315)
287 4ezb_A Uncharacterized conserv 97.4 8.8E-05 3E-09 49.7 3.3 36 3-38 22-58 (317)
288 1ks9_A KPA reductase;, 2-dehyd 97.4 0.00022 7.6E-09 46.6 5.2 33 7-39 2-34 (291)
289 1fec_A Trypanothione reductase 97.4 0.00019 6.5E-09 50.6 5.1 37 5-41 187-226 (490)
290 3qha_A Putative oxidoreductase 97.4 0.00015 5.1E-09 48.0 4.2 36 5-40 15-50 (296)
291 1mo9_A ORF3; nucleotide bindin 97.4 0.0003 1E-08 50.0 5.9 57 6-63 215-271 (523)
292 2hjr_A Malate dehydrogenase; m 97.4 0.00026 8.9E-09 47.7 5.3 35 5-39 14-49 (328)
293 3kd9_A Coenzyme A disulfide re 97.4 0.00016 5.6E-09 50.3 4.3 36 6-41 149-184 (449)
294 3c24_A Putative oxidoreductase 97.4 0.0003 1E-08 46.2 5.4 37 2-38 8-45 (286)
295 3d1c_A Flavin-containing putat 97.4 0.00022 7.6E-09 47.9 4.7 35 6-40 167-201 (369)
296 3l8k_A Dihydrolipoyl dehydroge 97.4 0.00042 1.4E-08 48.5 6.1 36 5-40 172-207 (466)
297 1bg6_A N-(1-D-carboxylethyl)-L 97.4 0.00027 9.1E-09 47.6 4.9 33 6-38 5-37 (359)
298 3ado_A Lambda-crystallin; L-gu 97.4 0.00022 7.5E-09 48.0 4.4 38 1-38 1-39 (319)
299 2q0l_A TRXR, thioredoxin reduc 97.4 0.00028 9.6E-09 46.4 4.9 36 5-40 143-178 (311)
300 2raf_A Putative dinucleotide-b 97.3 0.00036 1.2E-08 43.9 5.1 35 5-39 19-53 (209)
301 3lk7_A UDP-N-acetylmuramoylala 97.3 0.00025 8.4E-09 49.7 4.7 34 5-38 9-42 (451)
302 2y0c_A BCEC, UDP-glucose dehyd 97.3 0.00027 9.2E-09 49.9 4.9 34 5-38 8-41 (478)
303 3uox_A Otemo; baeyer-villiger 97.3 0.00035 1.2E-08 50.1 5.4 36 5-40 185-220 (545)
304 1fl2_A Alkyl hydroperoxide red 97.3 0.00031 1.1E-08 46.1 4.8 36 5-40 144-179 (310)
305 3mog_A Probable 3-hydroxybutyr 97.3 0.00038 1.3E-08 49.3 5.4 35 5-39 5-39 (483)
306 3pqe_A L-LDH, L-lactate dehydr 97.3 0.00034 1.1E-08 47.2 4.8 37 1-37 1-39 (326)
307 4dna_A Probable glutathione re 97.3 0.00049 1.7E-08 48.1 5.8 58 5-63 170-227 (463)
308 3l9w_A Glutathione-regulated p 97.3 0.00031 1.1E-08 48.8 4.7 36 4-39 3-38 (413)
309 2uyy_A N-PAC protein; long-cha 97.3 0.00054 1.8E-08 45.6 5.6 35 5-39 30-64 (316)
310 3gwf_A Cyclohexanone monooxyge 97.3 0.00035 1.2E-08 50.0 5.0 35 5-39 178-212 (540)
311 3dgh_A TRXR-1, thioredoxin red 97.3 0.00051 1.7E-08 48.3 5.7 34 5-38 187-220 (483)
312 1ur5_A Malate dehydrogenase; o 97.3 0.00046 1.6E-08 46.1 5.2 33 6-38 3-36 (309)
313 1vdc_A NTR, NADPH dependent th 97.3 0.00037 1.3E-08 46.2 4.7 36 5-40 159-194 (333)
314 2x5o_A UDP-N-acetylmuramoylala 97.3 0.00031 1.1E-08 49.0 4.4 36 5-40 5-40 (439)
315 3fbs_A Oxidoreductase; structu 97.3 0.00042 1.4E-08 45.0 4.8 50 5-63 141-190 (297)
316 3dfz_A SIRC, precorrin-2 dehyd 97.3 0.00058 2E-08 43.7 5.3 33 5-37 31-63 (223)
317 3eag_A UDP-N-acetylmuramate:L- 97.2 0.0009 3.1E-08 44.9 6.4 35 5-39 4-39 (326)
318 2q7v_A Thioredoxin reductase; 97.2 0.00041 1.4E-08 46.0 4.6 35 6-40 153-187 (325)
319 1m6i_A Programmed cell death p 97.2 0.00037 1.3E-08 49.2 4.6 59 5-63 180-242 (493)
320 1t2d_A LDH-P, L-lactate dehydr 97.2 0.0006 2.1E-08 45.8 5.4 35 5-39 4-39 (322)
321 2xve_A Flavin-containing monoo 97.2 0.0004 1.4E-08 48.7 4.7 36 5-40 197-232 (464)
322 1trb_A Thioredoxin reductase; 97.2 0.00045 1.5E-08 45.5 4.7 36 5-40 145-180 (320)
323 4a7p_A UDP-glucose dehydrogena 97.2 0.00052 1.8E-08 48.1 5.2 36 5-40 8-43 (446)
324 4ap3_A Steroid monooxygenase; 97.2 0.00046 1.6E-08 49.5 5.0 35 5-39 191-225 (549)
325 2a87_A TRXR, TR, thioredoxin r 97.2 0.00047 1.6E-08 45.9 4.8 36 5-40 155-190 (335)
326 3doj_A AT3G25530, dehydrogenas 97.2 0.00057 1.9E-08 45.5 5.1 34 6-39 22-55 (310)
327 3ggo_A Prephenate dehydrogenas 97.2 0.00066 2.3E-08 45.4 5.4 34 5-38 33-68 (314)
328 3itj_A Thioredoxin reductase 1 97.2 0.0009 3.1E-08 44.2 6.0 36 5-40 173-208 (338)
329 2gv8_A Monooxygenase; FMO, FAD 97.2 0.00054 1.8E-08 47.6 5.0 36 5-40 212-248 (447)
330 3hwr_A 2-dehydropantoate 2-red 97.2 0.00051 1.7E-08 45.9 4.7 33 5-38 19-51 (318)
331 3g79_A NDP-N-acetyl-D-galactos 97.2 0.00047 1.6E-08 48.8 4.6 34 6-39 19-54 (478)
332 2rcy_A Pyrroline carboxylate r 97.2 0.0014 4.9E-08 42.2 6.6 35 6-40 5-43 (262)
333 1zej_A HBD-9, 3-hydroxyacyl-CO 97.2 0.00043 1.5E-08 46.0 4.2 34 4-38 11-44 (293)
334 1evy_A Glycerol-3-phosphate de 97.2 0.00031 1.1E-08 47.7 3.5 32 7-38 17-48 (366)
335 3dtt_A NADP oxidoreductase; st 97.2 0.00065 2.2E-08 43.7 4.9 36 4-39 18-53 (245)
336 1vpd_A Tartronate semialdehyde 97.2 0.00041 1.4E-08 45.7 4.0 35 4-38 4-38 (299)
337 3pef_A 6-phosphogluconate dehy 97.2 0.00061 2.1E-08 44.7 4.8 34 6-39 2-35 (287)
338 2v6b_A L-LDH, L-lactate dehydr 97.1 0.00065 2.2E-08 45.2 4.9 32 7-38 2-35 (304)
339 3o0h_A Glutathione reductase; 97.1 0.00082 2.8E-08 47.2 5.6 36 5-40 191-226 (484)
340 4dio_A NAD(P) transhydrogenase 97.1 0.00078 2.7E-08 46.7 5.3 35 5-39 190-224 (405)
341 2zbw_A Thioredoxin reductase; 97.1 0.00049 1.7E-08 45.7 4.2 36 5-40 152-187 (335)
342 3l6d_A Putative oxidoreductase 97.1 0.001 3.6E-08 44.2 5.7 35 5-39 9-43 (306)
343 1yj8_A Glycerol-3-phosphate de 97.1 0.00061 2.1E-08 46.5 4.5 35 5-39 21-62 (375)
344 3cty_A Thioredoxin reductase; 97.1 0.00062 2.1E-08 44.9 4.4 35 6-40 156-190 (319)
345 3qsg_A NAD-binding phosphogluc 97.1 0.00062 2.1E-08 45.4 4.4 33 5-37 24-57 (312)
346 4huj_A Uncharacterized protein 97.1 0.00043 1.5E-08 43.9 3.4 34 6-39 24-58 (220)
347 3pid_A UDP-glucose 6-dehydroge 97.1 0.00054 1.8E-08 47.9 4.1 33 6-39 37-69 (432)
348 2pv7_A T-protein [includes: ch 97.1 0.0012 4E-08 43.8 5.6 34 6-39 22-56 (298)
349 3gt0_A Pyrroline-5-carboxylate 97.1 0.0011 3.7E-08 42.7 5.3 35 5-39 2-40 (247)
350 4ffl_A PYLC; amino acid, biosy 97.1 0.0011 3.9E-08 44.8 5.6 35 6-40 2-36 (363)
351 1kyq_A Met8P, siroheme biosynt 97.1 0.00042 1.4E-08 45.6 3.4 33 5-37 13-45 (274)
352 3vtf_A UDP-glucose 6-dehydroge 97.1 0.00057 2E-08 47.9 4.1 34 5-38 21-54 (444)
353 2vns_A Metalloreductase steap3 97.1 0.0011 3.9E-08 41.8 5.2 34 5-38 28-61 (215)
354 3k6j_A Protein F01G10.3, confi 97.1 0.00097 3.3E-08 47.0 5.3 34 6-39 55-88 (460)
355 2p4q_A 6-phosphogluconate dehy 97.1 0.0011 3.7E-08 47.1 5.5 36 4-39 9-44 (497)
356 1zcj_A Peroxisomal bifunctiona 97.0 0.00091 3.1E-08 47.1 5.1 33 6-38 38-70 (463)
357 3s5w_A L-ornithine 5-monooxyge 97.0 0.00054 1.9E-08 47.6 3.9 36 5-40 227-264 (463)
358 4g6h_A Rotenone-insensitive NA 97.0 0.00047 1.6E-08 48.9 3.6 59 7-66 219-291 (502)
359 1guz_A Malate dehydrogenase; o 97.0 0.001 3.4E-08 44.4 5.0 33 7-39 2-36 (310)
360 3gvi_A Malate dehydrogenase; N 97.0 0.0012 4E-08 44.5 5.3 35 5-39 7-42 (324)
361 4gbj_A 6-phosphogluconate dehy 97.0 0.00048 1.6E-08 45.8 3.3 37 3-39 3-39 (297)
362 1mv8_A GMD, GDP-mannose 6-dehy 97.0 0.00061 2.1E-08 47.5 4.0 32 7-38 2-33 (436)
363 1txg_A Glycerol-3-phosphate de 97.0 0.00072 2.5E-08 45.1 4.2 30 7-36 2-31 (335)
364 3c7a_A Octopine dehydrogenase; 97.0 0.00051 1.8E-08 47.2 3.6 30 6-35 3-33 (404)
365 2q3e_A UDP-glucose 6-dehydroge 97.0 0.00066 2.3E-08 47.7 4.0 33 6-38 6-40 (467)
366 3p7m_A Malate dehydrogenase; p 97.0 0.0014 4.9E-08 44.0 5.5 34 6-39 6-40 (321)
367 3ab1_A Ferredoxin--NADP reduct 97.0 0.00082 2.8E-08 45.2 4.2 36 5-40 163-198 (360)
368 3pdu_A 3-hydroxyisobutyrate de 97.0 0.0007 2.4E-08 44.5 3.7 34 6-39 2-35 (287)
369 2vdc_G Glutamate synthase [NAD 97.0 0.0015 5.1E-08 45.8 5.5 36 5-40 264-300 (456)
370 3p2y_A Alanine dehydrogenase/p 97.0 0.00094 3.2E-08 45.9 4.4 35 5-39 184-218 (381)
371 3dfu_A Uncharacterized protein 97.0 0.0002 6.9E-09 46.0 1.0 39 1-39 2-40 (232)
372 1hyu_A AHPF, alkyl hydroperoxi 97.0 0.00094 3.2E-08 47.5 4.5 36 5-40 355-390 (521)
373 1ldn_A L-lactate dehydrogenase 96.9 0.0013 4.5E-08 44.0 5.0 37 1-37 1-40 (316)
374 3ius_A Uncharacterized conserv 96.9 0.0011 3.9E-08 43.0 4.4 35 4-38 4-38 (286)
375 3f8d_A Thioredoxin reductase ( 96.9 0.0015 5.2E-08 42.8 5.1 37 5-41 154-190 (323)
376 3d0o_A L-LDH 1, L-lactate dehy 96.9 0.0012 4.1E-08 44.2 4.6 34 4-37 5-40 (317)
377 4gwg_A 6-phosphogluconate dehy 96.9 0.0017 6E-08 46.0 5.6 35 5-39 4-38 (484)
378 3cky_A 2-hydroxymethyl glutara 96.9 0.001 3.5E-08 43.8 4.2 34 5-38 4-37 (301)
379 3gpi_A NAD-dependent epimerase 96.9 0.0021 7.1E-08 41.8 5.6 34 6-39 4-37 (286)
380 1jw9_B Molybdopterin biosynthe 96.9 0.0011 3.6E-08 43.0 4.1 34 5-38 31-65 (249)
381 2zyd_A 6-phosphogluconate dehy 96.9 0.0014 4.9E-08 46.3 5.1 35 4-38 14-48 (480)
382 4dll_A 2-hydroxy-3-oxopropiona 96.9 0.0011 3.7E-08 44.4 4.2 34 6-39 32-65 (320)
383 3k30_A Histamine dehydrogenase 96.9 0.0011 3.6E-08 48.8 4.5 58 6-63 524-583 (690)
384 3oj0_A Glutr, glutamyl-tRNA re 96.9 0.00045 1.5E-08 40.8 2.1 35 5-39 21-55 (144)
385 1dlj_A UDP-glucose dehydrogena 96.9 0.0011 3.6E-08 45.9 4.2 31 7-38 2-32 (402)
386 2izz_A Pyrroline-5-carboxylate 96.9 0.0017 5.7E-08 43.5 5.0 34 6-39 23-60 (322)
387 2o3j_A UDP-glucose 6-dehydroge 96.9 0.001 3.4E-08 47.1 4.0 33 6-38 10-44 (481)
388 1x0v_A GPD-C, GPDH-C, glycerol 96.9 0.00077 2.6E-08 45.4 3.3 34 6-39 9-49 (354)
389 3r9u_A Thioredoxin reductase; 96.9 0.0015 5.3E-08 42.7 4.7 36 5-40 147-182 (315)
390 1a5z_A L-lactate dehydrogenase 96.9 0.0013 4.6E-08 44.0 4.4 32 7-38 2-35 (319)
391 2pgd_A 6-phosphogluconate dehy 96.8 0.002 6.9E-08 45.5 5.5 33 6-38 3-35 (482)
392 4e21_A 6-phosphogluconate dehy 96.8 0.0018 6E-08 44.2 4.9 33 6-38 23-55 (358)
393 2aef_A Calcium-gated potassium 96.8 0.00057 1.9E-08 43.5 2.4 34 5-39 9-42 (234)
394 1o94_A Tmadh, trimethylamine d 96.8 0.0007 2.4E-08 50.1 3.1 33 6-38 529-563 (729)
395 2h78_A Hibadh, 3-hydroxyisobut 96.8 0.0012 4.2E-08 43.5 4.0 33 6-38 4-36 (302)
396 2f1k_A Prephenate dehydrogenas 96.8 0.0019 6.5E-08 42.1 4.8 32 7-38 2-33 (279)
397 3tri_A Pyrroline-5-carboxylate 96.8 0.0025 8.7E-08 41.8 5.4 34 6-39 4-40 (280)
398 2iz1_A 6-phosphogluconate dehy 96.8 0.0024 8.3E-08 45.0 5.6 34 5-38 5-38 (474)
399 1l7d_A Nicotinamide nucleotide 96.8 0.0023 7.9E-08 43.9 5.3 35 5-39 172-206 (384)
400 1yqg_A Pyrroline-5-carboxylate 96.8 0.0017 5.9E-08 41.9 4.4 32 7-38 2-34 (263)
401 2gf2_A Hibadh, 3-hydroxyisobut 96.8 0.0018 6E-08 42.5 4.5 33 7-39 2-34 (296)
402 1b8p_A Protein (malate dehydro 96.8 0.0013 4.5E-08 44.2 3.9 37 1-37 1-45 (329)
403 3dhn_A NAD-dependent epimerase 96.8 0.0015 5.1E-08 41.0 4.0 38 1-39 1-39 (227)
404 3ktd_A Prephenate dehydrogenas 96.8 0.0029 1E-07 42.9 5.5 34 5-38 8-41 (341)
405 1x13_A NAD(P) transhydrogenase 96.7 0.0021 7.3E-08 44.4 4.9 35 5-39 172-206 (401)
406 1hyh_A L-hicdh, L-2-hydroxyiso 96.7 0.0018 6.2E-08 43.1 4.4 33 6-38 2-36 (309)
407 1oju_A MDH, malate dehydrogena 96.7 0.0019 6.4E-08 43.0 4.4 32 7-38 2-35 (294)
408 1jay_A Coenzyme F420H2:NADP+ o 96.7 0.0023 7.7E-08 40.0 4.6 32 7-38 2-34 (212)
409 2gag_A Heterotetrameric sarcos 96.7 0.0014 4.9E-08 49.9 4.2 48 6-63 285-332 (965)
410 3d1l_A Putative NADP oxidoredu 96.7 0.0025 8.7E-08 41.2 4.9 34 5-38 10-44 (266)
411 1cjc_A Protein (adrenodoxin re 96.7 0.0023 7.9E-08 44.9 4.8 35 5-39 145-200 (460)
412 2wtb_A MFP2, fatty acid multif 96.7 0.0024 8.1E-08 47.4 5.0 33 6-38 313-345 (725)
413 1pjc_A Protein (L-alanine dehy 96.7 0.0025 8.7E-08 43.4 4.8 33 6-38 168-200 (361)
414 4gx0_A TRKA domain protein; me 96.7 0.0031 1.1E-07 45.2 5.5 35 6-40 349-383 (565)
415 3nep_X Malate dehydrogenase; h 96.7 0.0025 8.6E-08 42.7 4.7 33 7-39 2-36 (314)
416 1kjq_A GART 2, phosphoribosylg 96.7 0.0034 1.2E-07 42.8 5.4 39 1-39 7-45 (391)
417 3lzw_A Ferredoxin--NADP reduct 96.7 0.0024 8E-08 42.1 4.5 52 5-63 154-205 (332)
418 3ojo_A CAP5O; rossmann fold, c 96.7 0.0014 4.6E-08 45.9 3.3 34 6-39 12-45 (431)
419 2g5c_A Prephenate dehydrogenas 96.6 0.0029 1E-07 41.3 4.8 33 6-38 2-36 (281)
420 1pgj_A 6PGDH, 6-PGDH, 6-phosph 96.6 0.0034 1.2E-07 44.4 5.3 32 7-38 3-34 (478)
421 2cvz_A Dehydrogenase, 3-hydrox 96.6 0.0022 7.6E-08 41.9 4.1 33 6-39 2-34 (289)
422 2i6t_A Ubiquitin-conjugating e 96.6 0.0026 8.8E-08 42.4 4.5 34 6-39 15-50 (303)
423 2eez_A Alanine dehydrogenase; 96.6 0.0033 1.1E-07 42.9 4.9 34 5-38 166-199 (369)
424 1np3_A Ketol-acid reductoisome 96.6 0.0046 1.6E-07 41.7 5.5 34 6-39 17-50 (338)
425 1hdo_A Biliverdin IX beta redu 96.6 0.0042 1.4E-07 38.1 5.0 34 6-39 4-38 (206)
426 2ahr_A Putative pyrroline carb 96.6 0.003 1E-07 40.7 4.4 33 6-38 4-36 (259)
427 3vku_A L-LDH, L-lactate dehydr 96.5 0.0035 1.2E-07 42.3 4.7 33 5-37 9-43 (326)
428 4a9w_A Monooxygenase; baeyer-v 96.5 0.003 1E-07 41.9 4.4 33 5-38 163-195 (357)
429 1gte_A Dihydropyrimidine dehyd 96.5 0.0043 1.5E-07 47.6 5.6 34 5-38 332-366 (1025)
430 4b4o_A Epimerase family protei 96.5 0.0048 1.7E-07 40.4 5.2 34 7-40 2-36 (298)
431 3orq_A N5-carboxyaminoimidazol 96.5 0.0055 1.9E-07 41.8 5.6 35 5-39 12-46 (377)
432 3phh_A Shikimate dehydrogenase 96.5 0.0053 1.8E-07 40.3 5.2 35 5-39 118-152 (269)
433 1wdk_A Fatty oxidation complex 96.5 0.0032 1.1E-07 46.7 4.6 33 6-38 315-347 (715)
434 1pjq_A CYSG, siroheme synthase 96.5 0.0035 1.2E-07 44.0 4.6 33 5-37 12-44 (457)
435 3ldh_A Lactate dehydrogenase; 96.5 0.0041 1.4E-07 42.0 4.7 34 5-38 21-56 (330)
436 1nyt_A Shikimate 5-dehydrogena 96.5 0.0046 1.6E-07 40.4 4.9 34 5-38 119-152 (271)
437 3vps_A TUNA, NAD-dependent epi 96.5 0.0056 1.9E-07 40.2 5.3 36 4-39 6-42 (321)
438 1yb4_A Tartronic semialdehyde 96.5 0.0019 6.5E-08 42.3 3.0 33 6-39 4-36 (295)
439 2vhw_A Alanine dehydrogenase; 96.5 0.0048 1.6E-07 42.3 5.0 34 5-38 168-201 (377)
440 4aj2_A L-lactate dehydrogenase 96.4 0.0054 1.9E-07 41.4 5.2 33 5-37 19-53 (331)
441 3b1f_A Putative prephenate deh 96.4 0.0042 1.4E-07 40.7 4.4 33 6-38 7-41 (290)
442 3ew7_A LMO0794 protein; Q8Y8U8 96.4 0.0057 2E-07 38.0 4.9 32 7-38 2-34 (221)
443 2a35_A Hypothetical protein PA 96.4 0.0043 1.5E-07 38.4 4.3 39 1-39 1-42 (215)
444 2zqz_A L-LDH, L-lactate dehydr 96.4 0.0051 1.7E-07 41.4 4.8 34 4-37 8-43 (326)
445 2a9f_A Putative malic enzyme ( 96.4 0.0043 1.5E-07 42.9 4.4 34 4-37 187-221 (398)
446 3q2o_A Phosphoribosylaminoimid 96.4 0.0074 2.5E-07 41.2 5.6 35 5-39 14-48 (389)
447 4e4t_A Phosphoribosylaminoimid 96.4 0.0074 2.5E-07 41.9 5.6 35 5-39 35-69 (419)
448 1i36_A Conserved hypothetical 96.4 0.004 1.4E-07 40.2 4.1 30 7-36 2-31 (264)
449 3h8v_A Ubiquitin-like modifier 96.4 0.0048 1.6E-07 41.0 4.4 34 5-38 36-70 (292)
450 3r6d_A NAD-dependent epimerase 96.3 0.0085 2.9E-07 37.4 5.4 36 4-39 4-41 (221)
451 2d4a_B Malate dehydrogenase; a 96.3 0.0062 2.1E-07 40.7 4.9 32 7-38 1-33 (308)
452 2egg_A AROE, shikimate 5-dehyd 96.3 0.0055 1.9E-07 40.6 4.6 34 5-38 141-175 (297)
453 3h2s_A Putative NADH-flavin re 96.3 0.007 2.4E-07 37.7 4.8 32 7-38 2-34 (224)
454 3fi9_A Malate dehydrogenase; s 96.3 0.0086 2.9E-07 40.6 5.4 33 5-37 8-43 (343)
455 2hk9_A Shikimate dehydrogenase 96.3 0.0057 2E-07 40.0 4.4 34 5-38 129-162 (275)
456 2dwc_A PH0318, 433AA long hypo 96.3 0.0089 3E-07 41.4 5.6 35 4-38 18-52 (433)
457 1ez4_A Lactate dehydrogenase; 96.3 0.0064 2.2E-07 40.8 4.7 33 5-37 5-39 (318)
458 3abi_A Putative uncharacterize 96.3 0.0049 1.7E-07 41.9 4.2 37 1-38 12-48 (365)
459 3e8x_A Putative NAD-dependent 96.3 0.007 2.4E-07 38.2 4.7 34 5-38 21-55 (236)
460 1vl6_A Malate oxidoreductase; 96.3 0.0055 1.9E-07 42.2 4.4 34 4-37 191-225 (388)
461 3rui_A Ubiquitin-like modifier 96.3 0.0071 2.4E-07 41.0 4.9 34 5-38 34-68 (340)
462 2r6j_A Eugenol synthase 1; phe 96.2 0.0067 2.3E-07 40.0 4.7 36 4-39 10-46 (318)
463 1ps9_A 2,4-dienoyl-COA reducta 96.2 0.0048 1.6E-07 45.2 4.3 28 5-32 494-521 (671)
464 2rir_A Dipicolinate synthase, 96.2 0.0075 2.6E-07 39.9 4.8 34 5-38 157-190 (300)
465 3d4o_A Dipicolinate synthase s 96.2 0.0076 2.6E-07 39.8 4.8 34 5-38 155-188 (293)
466 1smk_A Malate dehydrogenase, g 96.2 0.0041 1.4E-07 41.8 3.5 35 4-38 7-44 (326)
467 3don_A Shikimate dehydrogenase 96.2 0.0071 2.4E-07 39.8 4.5 35 5-39 117-152 (277)
468 2yjz_A Metalloreductase steap4 95.1 0.00086 2.9E-08 42.1 0.0 35 5-39 19-53 (201)
469 3ruf_A WBGU; rossmann fold, UD 96.1 0.0051 1.7E-07 41.1 3.8 36 4-39 24-60 (351)
470 1lqt_A FPRA; NADP+ derivative, 96.1 0.0077 2.6E-07 42.2 4.8 35 5-39 147-202 (456)
471 1p77_A Shikimate 5-dehydrogena 96.1 0.0055 1.9E-07 40.1 3.8 34 5-38 119-152 (272)
472 1qyc_A Phenylcoumaran benzylic 96.1 0.0096 3.3E-07 38.9 4.8 37 1-38 1-38 (308)
473 4gx0_A TRKA domain protein; me 96.1 0.0076 2.6E-07 43.2 4.5 36 4-39 126-161 (565)
474 3ond_A Adenosylhomocysteinase; 96.1 0.012 4.1E-07 41.8 5.4 34 5-38 265-298 (488)
475 2d5c_A AROE, shikimate 5-dehyd 96.1 0.012 4.1E-07 38.1 5.1 32 7-38 118-149 (263)
476 4id9_A Short-chain dehydrogena 96.1 0.013 4.4E-07 39.0 5.4 35 5-39 19-54 (347)
477 1zud_1 Adenylyltransferase THI 96.1 0.0074 2.5E-07 39.1 4.1 33 5-37 28-61 (251)
478 2dbq_A Glyoxylate reductase; D 96.1 0.012 4E-07 39.7 5.2 34 6-39 151-184 (334)
479 3ce6_A Adenosylhomocysteinase; 96.1 0.0093 3.2E-07 42.4 4.8 34 5-38 274-307 (494)
480 1mld_A Malate dehydrogenase; o 96.0 0.0063 2.2E-07 40.7 3.8 32 7-38 2-36 (314)
481 3h5n_A MCCB protein; ubiquitin 96.0 0.0083 2.8E-07 40.8 4.4 34 5-38 118-152 (353)
482 3m2p_A UDP-N-acetylglucosamine 96.0 0.011 3.7E-07 38.9 4.9 33 5-37 2-35 (311)
483 3gvp_A Adenosylhomocysteinase 96.0 0.0077 2.6E-07 42.1 4.3 34 5-38 220-253 (435)
484 2c5a_A GDP-mannose-3', 5'-epim 96.0 0.016 5.3E-07 39.3 5.7 35 5-39 29-64 (379)
485 1y7t_A Malate dehydrogenase; N 96.0 0.0067 2.3E-07 40.6 3.8 33 5-37 4-44 (327)
486 3enk_A UDP-glucose 4-epimerase 96.0 0.014 4.9E-07 38.7 5.4 36 4-39 4-40 (341)
487 3zwc_A Peroxisomal bifunctiona 96.0 0.0067 2.3E-07 45.2 4.1 34 6-39 317-350 (742)
488 2ydy_A Methionine adenosyltran 96.0 0.0093 3.2E-07 39.2 4.4 34 5-38 2-36 (315)
489 2ehd_A Oxidoreductase, oxidore 96.0 0.0087 3E-07 37.7 4.1 38 1-38 1-39 (234)
490 3k5i_A Phosphoribosyl-aminoimi 96.0 0.012 4.1E-07 40.6 5.1 33 5-38 24-56 (403)
491 3u62_A Shikimate dehydrogenase 96.0 0.014 4.7E-07 37.9 5.1 32 7-38 110-142 (253)
492 2x0j_A Malate dehydrogenase; o 96.0 0.0099 3.4E-07 39.5 4.4 32 7-38 2-35 (294)
493 1leh_A Leucine dehydrogenase; 95.9 0.012 4.1E-07 40.2 4.8 33 5-37 173-205 (364)
494 1ek6_A UDP-galactose 4-epimera 95.9 0.016 5.6E-07 38.5 5.4 34 5-38 2-36 (348)
495 1w4x_A Phenylacetone monooxyge 95.9 0.011 3.7E-07 42.2 4.7 36 5-40 186-221 (542)
496 1gpj_A Glutamyl-tRNA reductase 95.9 0.011 3.6E-07 40.9 4.4 34 5-38 167-201 (404)
497 3tnl_A Shikimate dehydrogenase 95.9 0.014 4.7E-07 39.2 4.8 33 5-37 154-187 (315)
498 3jyo_A Quinate/shikimate dehyd 95.9 0.015 5.2E-07 38.3 5.0 34 5-38 127-161 (283)
499 2gcg_A Glyoxylate reductase/hy 95.8 0.015 5.2E-07 39.1 5.0 35 5-39 155-189 (330)
500 3ba1_A HPPR, hydroxyphenylpyru 95.8 0.018 6.1E-07 38.9 5.3 36 5-40 164-199 (333)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.69 E-value=2.9e-16 Score=108.00 Aligned_cols=88 Identities=33% Similarity=0.527 Sum_probs=74.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcceEEEEECCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVKRLFVTNLRT 83 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~ 83 (115)
.++||+|||||++||++|+.|+++|++|+|+|+.+.+...++++.+.+++.++|+.+|+++.+.....+.....+++..+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 35899999999999999999999999999999998877788899999999999999999999998888888888888664
Q ss_pred Cee-EEeec
Q 047339 84 GAT-QETSL 91 (115)
Q Consensus 84 ~~~-~~~~~ 91 (115)
+.. ..+++
T Consensus 102 g~~~~~~~~ 110 (407)
T 3rp8_A 102 GENMTQFSL 110 (407)
T ss_dssp CCEEEEEEC
T ss_pred CCEeEEecc
Confidence 554 55554
No 2
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.67 E-value=1e-15 Score=105.53 Aligned_cols=82 Identities=41% Similarity=0.564 Sum_probs=70.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCc-eEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcceEEEEECC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIK-PLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVKRLFVTNLR 82 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~-v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~ 82 (115)
.++||+|||||++||++|+.|+++|++ |+|+|+.+.+...+.++.+.+++.++|+.+|+.+.+.....+.....+++ .
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~-~ 81 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYID-Q 81 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEC-T
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEc-C
Confidence 358999999999999999999999999 99999988877778889999999999999999999887776666666665 3
Q ss_pred CCee
Q 047339 83 TGAT 86 (115)
Q Consensus 83 ~~~~ 86 (115)
.+..
T Consensus 82 ~g~~ 85 (410)
T 3c96_A 82 SGAT 85 (410)
T ss_dssp TSCE
T ss_pred CCCE
Confidence 4544
No 3
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.66 E-value=1.2e-15 Score=111.04 Aligned_cols=79 Identities=27% Similarity=0.304 Sum_probs=71.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHH-----CCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcceEEE
Q 047339 4 VEKDVVIIGAGIAGLATALALKR-----LGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVKRLFV 78 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~-----~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~ 78 (115)
.++||+||||||+||++|+.|++ .|++|+|+|+.+.+...+++..+.++++++|+.+|+++.+.....++....+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~ 86 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEE
Confidence 46799999999999999999999 9999999999887777888899999999999999999999888888888888
Q ss_pred EECC
Q 047339 79 TNLR 82 (115)
Q Consensus 79 ~~~~ 82 (115)
++..
T Consensus 87 ~~~~ 90 (665)
T 1pn0_A 87 YNPD 90 (665)
T ss_dssp EEEC
T ss_pred EeCC
Confidence 7643
No 4
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.65 E-value=1.1e-15 Score=104.76 Aligned_cols=91 Identities=23% Similarity=0.270 Sum_probs=71.0
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcceEEEEE
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVKRLFVTN 80 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~ 80 (115)
|++.++||+|||||++|+++|+.|+++|++|+|+|+.+.+...+++..+.+++.+.|+.+|+.+.+.....+.....+++
T Consensus 2 M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (399)
T 2x3n_A 2 MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVY 81 (399)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEe
Confidence 55567899999999999999999999999999999988776677888999999999999999998887666666666665
Q ss_pred CCCCee-EEeecC
Q 047339 81 LRTGAT-QETSLA 92 (115)
Q Consensus 81 ~~~~~~-~~~~~~ 92 (115)
. ++.. ..++..
T Consensus 82 ~-~g~~~~~~~~~ 93 (399)
T 2x3n_A 82 H-DGELLRYFNYS 93 (399)
T ss_dssp E-TTEEEEEEETT
T ss_pred C-CCCEEEecchH
Confidence 3 3433 445443
No 5
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.63 E-value=4.8e-15 Score=101.16 Aligned_cols=84 Identities=26% Similarity=0.298 Sum_probs=73.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcceEEEEECCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVKRLFVTNLRTG 84 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~ 84 (115)
++||+|||||++|+++|+.|+++|++|+|+|+.+.+...+.++.+.+++.+.|+.+|+.+.+.....+.....+++. +
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~--g 88 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH--N 88 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET--T
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC--C
Confidence 47999999999999999999999999999999888776788899999999999999999999888878888888875 5
Q ss_pred ee-EEee
Q 047339 85 AT-QETS 90 (115)
Q Consensus 85 ~~-~~~~ 90 (115)
.. ..++
T Consensus 89 ~~~~~~~ 95 (379)
T 3alj_A 89 KSVSKET 95 (379)
T ss_dssp EEEEEEC
T ss_pred ceeeecc
Confidence 44 3443
No 6
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.62 E-value=6.6e-15 Score=105.06 Aligned_cols=88 Identities=25% Similarity=0.322 Sum_probs=71.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcce---EEEEE
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVKR---LFVTN 80 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~---~~~~~ 80 (115)
+++||+||||||+||++|+.|+++|++|+|+|+.+.+...+++..+.++++++|+.+|+.+.+.....+... ..++.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEec
Confidence 357999999999999999999999999999999988877888899999999999999999999877666532 33333
Q ss_pred CCCCee-EEeec
Q 047339 81 LRTGAT-QETSL 91 (115)
Q Consensus 81 ~~~~~~-~~~~~ 91 (115)
...+.. ..+++
T Consensus 105 ~~~g~~~~~~~~ 116 (549)
T 2r0c_A 105 RVGGHEVYRIPL 116 (549)
T ss_dssp SBTSCEEEEECC
T ss_pred cCCCceeEeecc
Confidence 334443 44444
No 7
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.62 E-value=6e-15 Score=101.29 Aligned_cols=84 Identities=29% Similarity=0.381 Sum_probs=68.5
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC-CCcceeeeeCccHHHHHHHcCChHHHhcccCCcceEEEE
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL-RGTGAAINFAPNAWLALDALGVSHKLASIYDPVKRLFVT 79 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~ 79 (115)
|++.++||+|||||++|+++|+.|+++|++|+|+|+.+.+ ...+.++.+.+++.++|+.+|+.+ .....+.....++
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~~~~~~~~~~~~ 78 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DSISVPSSSMEYV 78 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GGTCBCCCEEEEE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--ccccccccceEEE
Confidence 6667799999999999999999999999999999998764 445778889999999999999987 4555666677777
Q ss_pred ECCCCee
Q 047339 80 NLRTGAT 86 (115)
Q Consensus 80 ~~~~~~~ 86 (115)
+..++..
T Consensus 79 ~~~~g~~ 85 (397)
T 2vou_A 79 DALTGER 85 (397)
T ss_dssp ETTTCCE
T ss_pred ecCCCCc
Confidence 6524544
No 8
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.61 E-value=1.9e-15 Score=107.38 Aligned_cols=74 Identities=34% Similarity=0.473 Sum_probs=67.5
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcc
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVK 74 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~ 74 (115)
|+++++||+||||||+||++|+.|+++|++|+|+|+.+.....+++..+.++++++|+.+|+.+.+.....+..
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~ 74 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRG 74 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSC
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcc
Confidence 77788999999999999999999999999999999998887788888999999999999999999988765543
No 9
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.59 E-value=1.5e-14 Score=104.88 Aligned_cols=77 Identities=22% Similarity=0.261 Sum_probs=69.0
Q ss_pred cccEEEECCCHHHHHHHHHHHH-CCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcceEEEEEC
Q 047339 5 EKDVVIIGAGIAGLATALALKR-LGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVKRLFVTNL 81 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~-~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~ 81 (115)
++||+||||||+||++|+.|++ .|++|+|+|+.+.+...+++..+.++++++|+.+|+.+.+.....+.....++..
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~ 109 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKP 109 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECC
Confidence 5799999999999999999999 9999999999988877888899999999999999999998877766667777663
No 10
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.57 E-value=1.1e-14 Score=103.04 Aligned_cols=67 Identities=24% Similarity=0.441 Sum_probs=60.7
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcc
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASI 69 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~ 69 (115)
++++||+||||||+||++|+.|+++|++|+|+|+.+.+...+++..+.++++++|+.+|+.+.+...
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~ 75 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV 75 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc
Confidence 4578999999999999999999999999999999988777788899999999999999999887654
No 11
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.56 E-value=4e-14 Score=97.47 Aligned_cols=89 Identities=22% Similarity=0.226 Sum_probs=66.8
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcc-eEEEE
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVK-RLFVT 79 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~-~~~~~ 79 (115)
|+++++||+|||||++|+++|+.|+++|++|+|+|+.+.+. ...+..+.++..+.++.+|+.+.+.....+.. ...+.
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 79 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFV 79 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEE
Confidence 66677999999999999999999999999999999987653 35566788999999999999988887654433 34443
Q ss_pred ECCCCeeEEeecC
Q 047339 80 NLRTGATQETSLA 92 (115)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (115)
+ . .....+++.
T Consensus 80 ~-~-~~~~~~~~~ 90 (421)
T 3nix_A 80 R-G-KEIADFNFS 90 (421)
T ss_dssp E-T-TEEEEEETT
T ss_pred e-C-CeeEEEeeh
Confidence 3 2 233455554
No 12
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.56 E-value=9.2e-15 Score=103.36 Aligned_cols=67 Identities=25% Similarity=0.426 Sum_probs=61.1
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcc
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASI 69 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~ 69 (115)
++++||+||||||+||++|+.|+++|++|+|+|+.+.+...+++..++++++++|+.+|+.+.+...
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~ 76 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV 76 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc
Confidence 4678999999999999999999999999999999988777788999999999999999999887654
No 13
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.56 E-value=9.1e-15 Score=104.86 Aligned_cols=71 Identities=28% Similarity=0.298 Sum_probs=61.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCc
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPV 73 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~ 73 (115)
.+++||+||||||+||++|+.|+++|++|+|+|+.+.+...+++..+.+++.++|+.+|+++.+.......
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~ 117 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVA 117 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCccc
Confidence 35689999999999999999999999999999999888778889999999999999999999988766443
No 14
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.54 E-value=1.8e-14 Score=98.41 Aligned_cols=63 Identities=29% Similarity=0.350 Sum_probs=55.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC--cceeeeeCccHHHHHHHcCChHHHhc
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG--TGAAINFAPNAWLALDALGVSHKLAS 68 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~--~~~~~~~~~~~~~~l~~~g~~~~i~~ 68 (115)
.+|+||||||+||++|+.|+++|++|+|+||.+.+.. .+.++.++++++++|+.+|+.+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~ 66 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLA 66 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHH
Confidence 4899999999999999999999999999999887644 36678899999999999999876643
No 15
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.53 E-value=1.7e-14 Score=92.40 Aligned_cols=41 Identities=39% Similarity=0.558 Sum_probs=36.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcc
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTG 44 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~ 44 (115)
|++||+||||||+||++|+.|+++|++|+|+||.+.+++..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 56899999999999999999999999999999998876543
No 16
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.53 E-value=1.3e-14 Score=99.37 Aligned_cols=77 Identities=25% Similarity=0.236 Sum_probs=63.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC--CCcceeeeeCccHHHHHHHcCChHHHhcccCCcceEEEEE
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL--RGTGAAINFAPNAWLALDALGVSHKLASIYDPVKRLFVTN 80 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~--~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~ 80 (115)
|++||+|||||++|+++|+.|++.|++|+|+|+.+.+ ....++..+.+++.++|+.+|+++.+.....+.....+++
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 79 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAF 79 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEE
T ss_pred CCccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEE
Confidence 4689999999999999999999999999999998742 1123334588999999999999998887666666666665
No 17
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.51 E-value=4.1e-14 Score=96.07 Aligned_cols=75 Identities=20% Similarity=0.276 Sum_probs=54.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCc-ceeeeeCccHHHHHHHcCChHHHhcccCCcceEEEEECC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGT-GAAINFAPNAWLALDALGVSHKLASIYDPVKRLFVTNLR 82 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~ 82 (115)
+|||+||||||+||++|+.|+++|++|+|+|+.+.++.. .++..+.+ +.++.+++.........++....++...
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~---~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCH---HHHHHcCCCchhhhhhcccceEEEEeCC
Confidence 489999999999999999999999999999998775432 22344544 3677777654444444455566666543
No 18
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.48 E-value=6.1e-13 Score=95.82 Aligned_cols=69 Identities=29% Similarity=0.380 Sum_probs=59.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHHhcccCCcc
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKLASIYDPVK 74 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~ 74 (115)
++||+|||||++|+++|+.|+++|++|+|+|+.+.+. ...+..+.+...+.++.+|+++.+........
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~-~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~ 91 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR-YRVGESLLPGTMSILNRLGLQEKIDAQNYVKK 91 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC-CCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC-CceeeeECHHHHHHHHHcCCcHHHHhcCCccc
Confidence 5899999999999999999999999999999986653 34567788999999999999988877654433
No 19
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.47 E-value=2.7e-13 Score=93.12 Aligned_cols=81 Identities=23% Similarity=0.374 Sum_probs=62.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC--cceeeeeCc-cHHHHHHHcCChHHHhcccCCcceEEEEE
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG--TGAAINFAP-NAWLALDALGVSHKLASIYDPVKRLFVTN 80 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~--~~~~~~~~~-~~~~~l~~~g~~~~i~~~~~~~~~~~~~~ 80 (115)
+++||+|||||++|+++|+.|++.|++|+|+|+.+.+.. .+.++.+.+ +..+.|+.+|+.+.+.....+... .+++
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~~ 103 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIAD 103 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEEC
Confidence 357999999999999999999999999999999876533 344455554 568999999999998876666555 5554
Q ss_pred CCCCee
Q 047339 81 LRTGAT 86 (115)
Q Consensus 81 ~~~~~~ 86 (115)
.++..
T Consensus 104 -~~g~~ 108 (398)
T 2xdo_A 104 -EKGNI 108 (398)
T ss_dssp -SSSEE
T ss_pred -CCCCc
Confidence 44544
No 20
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.47 E-value=5e-13 Score=94.64 Aligned_cols=89 Identities=19% Similarity=0.181 Sum_probs=64.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHH-HHHHcCChHHHhcccCCcceEEEEEC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWL-ALDALGVSHKLASIYDPVKRLFVTNL 81 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~i~~~~~~~~~~~~~~~ 81 (115)
+.++||+|||||++|+++|+.|+++|++|+|+|+.+.+. ...+..+.++... +++.+|+.+.+.....+......+.+
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~ 83 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPR-HQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRW 83 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEEC
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCC-CCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEe
Confidence 346899999999999999999999999999999987543 3345556666554 89999999988877666555444443
Q ss_pred CCC-eeEEeecC
Q 047339 82 RTG-ATQETSLA 92 (115)
Q Consensus 82 ~~~-~~~~~~~~ 92 (115)
... ..+.+.+.
T Consensus 84 ~~~~~~~~~~~~ 95 (512)
T 3e1t_A 84 GKEPEPWTFGFT 95 (512)
T ss_dssp SSCSSCEEEESS
T ss_pred cCCccccccccc
Confidence 322 22444444
No 21
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.43 E-value=3.5e-13 Score=95.67 Aligned_cols=80 Identities=20% Similarity=0.259 Sum_probs=61.4
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHH------------CCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHH--H
Q 047339 1 METVEKDVVIIGAGIAGLATALALKR------------LGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHK--L 66 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~------------~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--i 66 (115)
|++..+||+|||||++|+++|+.|++ .|++|+|+|+.+.+. .+.+..+.++..++|+.+|+.+. +
T Consensus 3 m~~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~-~g~g~~~~p~~~~~l~~lGi~e~~~~ 81 (526)
T 2pyx_A 3 MQKPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVAT-IGVGEGTWPSMRSTLSKIGIDENDFI 81 (526)
T ss_dssp GGSCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCC-CCSCEECCTHHHHHHHHHTCCHHHHH
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCC-cceeeechHhHHHHHHHcCCCHHHHH
Confidence 33456899999999999999999999 999999999876543 33477788999999999999876 5
Q ss_pred hcccCC-cceEEEEEC
Q 047339 67 ASIYDP-VKRLFVTNL 81 (115)
Q Consensus 67 ~~~~~~-~~~~~~~~~ 81 (115)
...... .....+.++
T Consensus 82 ~~~~~~~~~g~~~~~~ 97 (526)
T 2pyx_A 82 RQCDASFKQGSRFINW 97 (526)
T ss_dssp HHTTCEEECEEEEESC
T ss_pred HHcCCEEECCCcccCC
Confidence 554332 234444433
No 22
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.37 E-value=2.3e-12 Score=92.02 Aligned_cols=80 Identities=21% Similarity=0.228 Sum_probs=60.0
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHH---CCCceEEEcCCCCCCCcceeeeeCccHHH-HHHHcCChHH--HhcccCCc-
Q 047339 1 METVEKDVVIIGAGIAGLATALALKR---LGIKPLVLEKSDGLRGTGAAINFAPNAWL-ALDALGVSHK--LASIYDPV- 73 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~---~g~~v~viE~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~--i~~~~~~~- 73 (115)
|++..+||+|||||++|+++|+.|++ .|++|+|+|+.+.+. .+.+..+.++..+ +++.+|+.+. +......+
T Consensus 21 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~ 99 (550)
T 2e4g_A 21 MSGKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPT-LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYK 99 (550)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCC-CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEE
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCc-cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEE
Confidence 44446899999999999999999999 999999999976543 3345778888899 9999999765 55443333
Q ss_pred ceEEEEEC
Q 047339 74 KRLFVTNL 81 (115)
Q Consensus 74 ~~~~~~~~ 81 (115)
....+..+
T Consensus 100 ~g~~~~~w 107 (550)
T 2e4g_A 100 VAIKFINW 107 (550)
T ss_dssp CEEEEESS
T ss_pred EeeeEeec
Confidence 23444443
No 23
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.35 E-value=3.1e-12 Score=91.01 Aligned_cols=64 Identities=28% Similarity=0.361 Sum_probs=53.0
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHH---CCCceEEEcCCCCCCCcceeeeeCccHHH-HHHHcCChHH
Q 047339 1 METVEKDVVIIGAGIAGLATALALKR---LGIKPLVLEKSDGLRGTGAAINFAPNAWL-ALDALGVSHK 65 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~---~g~~v~viE~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~ 65 (115)
|++..+||+|||||++|+++|+.|++ .|++|+|+|+...+. .+.+..+.++..+ +++.+|+.+.
T Consensus 1 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lG~~~~ 68 (538)
T 2aqj_A 1 MNKPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR-IGVGEATIPSLQKVFFDFLGIPER 68 (538)
T ss_dssp -CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC-CCSCEECCTHHHHHTHHHHTCCHH
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC-cCCCcccchhHHHHHHHHhCCCHH
Confidence 55556899999999999999999999 999999999965443 3336677888888 9999998754
No 24
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.34 E-value=3.6e-12 Score=86.90 Aligned_cols=76 Identities=20% Similarity=0.251 Sum_probs=54.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC-cceeeeeCccHHHHHHHcCChHHHhcccCCcceEEEEECC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG-TGAAINFAPNAWLALDALGVSHKLASIYDPVKRLFVTNLR 82 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~ 82 (115)
.++||+|||||++|+++|+.|+++|++|+|+|+.+.++. ...+..+. .+.++.+|+++.............+++..
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLS---KGILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEE---THHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccC---HHHHHHcCCCCChHHhhhhcceEEEEcCC
Confidence 358999999999999999999999999999999886533 22222232 36788888865533344455566666533
No 25
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.30 E-value=1.4e-12 Score=90.62 Aligned_cols=67 Identities=31% Similarity=0.414 Sum_probs=50.2
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCC------CceEEEcCCCCCCCccee---------------eeeCccHHHHHHH
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLG------IKPLVLEKSDGLRGTGAA---------------INFAPNAWLALDA 59 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g------~~v~viE~~~~~~~~~~~---------------~~~~~~~~~~l~~ 59 (115)
|+.+++||+|||||++||++|+.|+++| ++|+|+|+.+.+++...+ ....++..+++++
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~ 80 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKD 80 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHH
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHH
Confidence 7677899999999999999999999999 999999998776543221 1224567789999
Q ss_pred cCChHHHh
Q 047339 60 LGVSHKLA 67 (115)
Q Consensus 60 ~g~~~~i~ 67 (115)
+|+.+.+.
T Consensus 81 lgl~~~~~ 88 (470)
T 3i6d_A 81 LGLEHLLV 88 (470)
T ss_dssp TTCCTTEE
T ss_pred cCCcceee
Confidence 99875543
No 26
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.29 E-value=3.1e-12 Score=85.08 Aligned_cols=38 Identities=34% Similarity=0.601 Sum_probs=34.4
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|+.++|||+||||||+|+++|+.|++.|++|+|+|+..
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 88889999999999999999999999999999999864
No 27
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.27 E-value=5.1e-12 Score=89.24 Aligned_cols=66 Identities=27% Similarity=0.301 Sum_probs=50.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHH---CCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHH--Hhccc
Q 047339 4 VEKDVVIIGAGIAGLATALALKR---LGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHK--LASIY 70 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~---~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--i~~~~ 70 (115)
|.+||+|||||++|+++|+.|++ +|++|+|+|+.+.+ ..+.+..+.++..++++.+|+.+. +....
T Consensus 1 m~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~-~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~ 71 (511)
T 2weu_A 1 MIRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVR-RIGVGEATFSTVRHFFDYLGLDEREWLPRCA 71 (511)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTT
T ss_pred CcceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCC-ceeeccccCcchHHHHHHcCCCHHHHHHHcC
Confidence 35799999999999999999999 99999999997643 334466678888999999999765 54433
No 28
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.26 E-value=2.4e-12 Score=87.99 Aligned_cols=50 Identities=28% Similarity=0.270 Sum_probs=44.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCCCCcceeeeeCccHHH
Q 047339 6 KDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGLRGTGAAINFAPNAWL 55 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~ 55 (115)
+||+||||||+|+++|+.|+++ |++|+|+|+.+.+...+.++.+++++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~ 52 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQ 52 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHH
Confidence 3899999999999999999999 9999999998887667788888887766
No 29
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.24 E-value=7.1e-12 Score=88.10 Aligned_cols=41 Identities=29% Similarity=0.493 Sum_probs=36.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHH-CCCceEEEcCCCCCCCcc
Q 047339 4 VEKDVVIIGAGIAGLATALALKR-LGIKPLVLEKSDGLRGTG 44 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~-~g~~v~viE~~~~~~~~~ 44 (115)
+.+||+|||||++||++|+.|++ .|++|+|+|+++.+++..
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 46899999999999999999987 599999999999887644
No 30
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.23 E-value=1e-11 Score=86.60 Aligned_cols=59 Identities=31% Similarity=0.432 Sum_probs=46.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC--CcceeeeeCccHHHHHHHcCChH
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR--GTGAAINFAPNAWLALDALGVSH 64 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~--~~~~~~~~~~~~~~~l~~~g~~~ 64 (115)
++++||+||||||+|+++|+.|+++|++|+|+|+.+.+. ....+..+ ..+.++.+|+.+
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~ 64 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPY 64 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCC
Confidence 457899999999999999999999999999999987532 22233333 457788888754
No 31
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.22 E-value=1.9e-11 Score=84.94 Aligned_cols=60 Identities=23% Similarity=0.203 Sum_probs=42.6
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC---Cccee-eeeCccHHHHHHHcCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR---GTGAA-INFAPNAWLALDALGV 62 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~---~~~~~-~~~~~~~~~~l~~~g~ 62 (115)
.|++||+||||||+|+++|+.|+++|++|+|+|+.+... +...+ ..........++.+|+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~ 83 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDV 83 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcCh
Confidence 467899999999999999999999999999999876321 11111 2234456667777765
No 32
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.21 E-value=3.3e-11 Score=83.71 Aligned_cols=63 Identities=35% Similarity=0.521 Sum_probs=48.1
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeee------------e---CccHHHHHHHcCCh
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAIN------------F---APNAWLALDALGVS 63 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~------------~---~~~~~~~l~~~g~~ 63 (115)
|+..++||+|||||++||++|+.|++.|++|+|+|+++.+++...+.. + .+...++++++|+.
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLK 78 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCc
Confidence 666678999999999999999999999999999999887765433211 1 23455677777764
No 33
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.20 E-value=7.2e-11 Score=82.51 Aligned_cols=64 Identities=28% Similarity=0.453 Sum_probs=50.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeee---------------CccHHHHHHHcCChHHHh
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINF---------------APNAWLALDALGVSHKLA 67 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~---------------~~~~~~~l~~~g~~~~i~ 67 (115)
.++||+|||||++||++|+.|+++|++|+|+|+++.+++...+... .+...++++.+|+.+.+.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~~ 93 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRIR 93 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCcceee
Confidence 3679999999999999999999999999999999887654332211 345778999999876544
No 34
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.20 E-value=3.2e-11 Score=80.92 Aligned_cols=60 Identities=28% Similarity=0.411 Sum_probs=44.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHH--CCCceEEEcCCCCCCCccee-------eeeCccHHHHHHHcCCh
Q 047339 4 VEKDVVIIGAGIAGLATALALKR--LGIKPLVLEKSDGLRGTGAA-------INFAPNAWLALDALGVS 63 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~--~g~~v~viE~~~~~~~~~~~-------~~~~~~~~~~l~~~g~~ 63 (115)
.++||+||||||+||++|++|++ .|++|+|+|+.+.+++.... ..+.....++++.+|+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~ 132 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCE
Confidence 35799999999999999999975 59999999998876543221 22334455677777653
No 35
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.19 E-value=4.7e-11 Score=84.40 Aligned_cols=58 Identities=28% Similarity=0.445 Sum_probs=48.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGV 62 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~ 62 (115)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..+ ......+.+...+.++.+|+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g-~~~~~~~~~~~~~~l~~~g~ 148 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS-RHNVLHLWPFTIHDLRALGA 148 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC-CCCEEECCHHHHHHHHTTTH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC-CCCcccCChhHHHHHHHcCC
Confidence 46899999999999999999999999999999987764 33556677777888877776
No 36
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.19 E-value=4.4e-11 Score=79.95 Aligned_cols=39 Identities=41% Similarity=0.618 Sum_probs=34.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
|++||+|||||++|+++|+.|+++|++|+|+|+.+.+++
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg 39 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcc
Confidence 357999999999999999999999999999999876643
No 37
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.17 E-value=2.8e-11 Score=80.21 Aligned_cols=37 Identities=41% Similarity=0.583 Sum_probs=33.3
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|+.+ +||+||||||+|+++|+.|++.|++|+|+|+..
T Consensus 1 M~~~-yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNI-HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp -CCC-EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCC-CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 6554 899999999999999999999999999999865
No 38
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.16 E-value=4.7e-11 Score=85.90 Aligned_cols=54 Identities=37% Similarity=0.533 Sum_probs=44.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHC------CCceEEEcCCCCCCCc-ceeeeeCccHHHHH
Q 047339 4 VEKDVVIIGAGIAGLATALALKRL------GIKPLVLEKSDGLRGT-GAAINFAPNAWLAL 57 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~------g~~v~viE~~~~~~~~-~~~~~~~~~~~~~l 57 (115)
|++||+|||||++|+++|+.|++. |++|+|+|+.+.++.. ..+..+.++.++.|
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l 94 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL 94 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH
Confidence 568999999999999999999999 9999999998776542 34556777776655
No 39
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.16 E-value=4.1e-11 Score=83.67 Aligned_cols=63 Identities=29% Similarity=0.497 Sum_probs=47.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCCCCCCcceeee-------------e------CccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI--KPLVLEKSDGLRGTGAAIN-------------F------APNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~~~~~~~~~~~-------------~------~~~~~~~l~~~g~~ 63 (115)
++||+|||||++||++|+.|+++|. +|+|+|+.+.+++...+.. + .+...++++++|+.
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 4799999999999999999999999 9999999887654332211 1 11235788888887
Q ss_pred HHHh
Q 047339 64 HKLA 67 (115)
Q Consensus 64 ~~i~ 67 (115)
+.+.
T Consensus 82 ~~~~ 85 (477)
T 3nks_A 82 SEVL 85 (477)
T ss_dssp GGEE
T ss_pred ceee
Confidence 6544
No 40
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.15 E-value=3.4e-11 Score=84.63 Aligned_cols=40 Identities=43% Similarity=0.622 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcce
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGA 45 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~ 45 (115)
++|+|||||++||++|+.|+++|++|+|+|+++.+++...
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------C
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEE
Confidence 7899999999999999999999999999999998866443
No 41
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.13 E-value=1.3e-10 Score=82.19 Aligned_cols=60 Identities=30% Similarity=0.471 Sum_probs=46.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeee-------------e---CccHHHHHHHcCCh
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAIN-------------F---APNAWLALDALGVS 63 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~-------------~---~~~~~~~l~~~g~~ 63 (115)
+++||+|||||++||++|+.|+++|++|+|+|+++.+++...... + .+...++++++|+.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 78 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLE 78 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCc
Confidence 458999999999999999999999999999999887754332111 1 23456677777765
No 42
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.13 E-value=1.6e-10 Score=81.24 Aligned_cols=62 Identities=32% Similarity=0.479 Sum_probs=49.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceee------------e---eCccHHHHHHHcCChHHH
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAI------------N---FAPNAWLALDALGVSHKL 66 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~------------~---~~~~~~~~l~~~g~~~~i 66 (115)
++||+|||||++||++|+.|+++|++|+|+|+.+.+++..... . ..+...++++.+|+.+.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~ 89 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREKQ 89 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCcccc
Confidence 4799999999999999999999999999999998876533211 1 135577899999987653
No 43
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.13 E-value=6e-11 Score=78.73 Aligned_cols=36 Identities=31% Similarity=0.432 Sum_probs=32.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|||+||||||+|+++|+.|++.|++|+|+|+...
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~ 40 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN 40 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 358999999999999999999999999999998653
No 44
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.12 E-value=1.1e-10 Score=80.46 Aligned_cols=42 Identities=38% Similarity=0.633 Sum_probs=36.9
Q ss_pred CC-CccccEEEECCCHHHHHHHHHHHHCC-CceEEEcCCCCCCC
Q 047339 1 ME-TVEKDVVIIGAGIAGLATALALKRLG-IKPLVLEKSDGLRG 42 (115)
Q Consensus 1 m~-~~~~~v~IvG~G~~Gl~~A~~l~~~g-~~v~viE~~~~~~~ 42 (115)
|+ .+++||+|||||++||++|+.|+++| ++|+|+|+.+.+++
T Consensus 1 M~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp -CCCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 54 35789999999999999999999999 99999999887754
No 45
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.12 E-value=2.3e-10 Score=80.38 Aligned_cols=62 Identities=29% Similarity=0.519 Sum_probs=48.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeee---------------eCccHHHHHHHcCChHHHh
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAIN---------------FAPNAWLALDALGVSHKLA 67 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~---------------~~~~~~~~l~~~g~~~~i~ 67 (115)
+||+|||||++||++|+.|+++|++|+|+|+.+.+++...... ..++..+.++++|+.+.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~ 116 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNALS 116 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCcceee
Confidence 7999999999999999999999999999999988765433211 2355677888888755443
No 46
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.12 E-value=8.3e-11 Score=81.63 Aligned_cols=41 Identities=37% Similarity=0.559 Sum_probs=34.1
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
|.+.++||+|||||++|+++|+.|+++|++|+|+|+.+.++
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g 63 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPG 63 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 34456899999999999999999999999999999988753
No 47
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.12 E-value=1.2e-10 Score=80.46 Aligned_cols=38 Identities=37% Similarity=0.627 Sum_probs=34.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCc
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGT 43 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~ 43 (115)
+||+|||||++|+++|+.|+++|++|+|+|+.+..++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGR 39 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCe
Confidence 79999999999999999999999999999997766543
No 48
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.10 E-value=2.8e-10 Score=79.82 Aligned_cols=40 Identities=38% Similarity=0.557 Sum_probs=36.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCc
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGT 43 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~ 43 (115)
.++||+|||||++||++|+.|+++|++|+|+|+.+.+++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 4689999999999999999999999999999998877654
No 49
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.10 E-value=1.3e-10 Score=80.08 Aligned_cols=39 Identities=28% Similarity=0.474 Sum_probs=35.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHC-CCceEEEcCCCCCCCc
Q 047339 5 EKDVVIIGAGIAGLATALALKRL-GIKPLVLEKSDGLRGT 43 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~-g~~v~viE~~~~~~~~ 43 (115)
++||+|||||++||++|+.|+++ |++|+|+|+.+.+++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 68999999999999999999999 9999999998876543
No 50
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.10 E-value=1.3e-10 Score=78.34 Aligned_cols=36 Identities=44% Similarity=0.662 Sum_probs=33.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.++||+|||||++|+++|+.|+++|++|+|+|+.+.
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999864
No 51
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.10 E-value=1.9e-10 Score=77.97 Aligned_cols=60 Identities=33% Similarity=0.504 Sum_probs=45.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCCCCcc-------eeeeeCccHHHHHHHcCCh
Q 047339 4 VEKDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGLRGTG-------AAINFAPNAWLALDALGVS 63 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~~~~~-------~~~~~~~~~~~~l~~~g~~ 63 (115)
.++||+|||||++|+++|+.|+++ |++|+|+|+...+++.. ....+.+...++|+.+|+.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~ 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVP 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCc
Confidence 468999999999999999999997 99999999987654221 1223345567788877753
No 52
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.10 E-value=1e-10 Score=82.84 Aligned_cols=40 Identities=50% Similarity=0.698 Sum_probs=36.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCC-CceEEEcCCCCCCCc
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLG-IKPLVLEKSDGLRGT 43 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g-~~v~viE~~~~~~~~ 43 (115)
+++||+|||||++||++|+.|+++| ++|+|+|+.+.+++.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 4579999999999999999999999 999999999887654
No 53
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.08 E-value=2.1e-10 Score=80.18 Aligned_cols=42 Identities=31% Similarity=0.437 Sum_probs=38.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCccee
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAA 46 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~ 46 (115)
++||+|||+|++||++|..|+++|++|+|+|+++.+++...+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 589999999999999999999999999999999988765544
No 54
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.08 E-value=2.5e-10 Score=75.40 Aligned_cols=38 Identities=34% Similarity=0.566 Sum_probs=34.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHC-CCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRL-GIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~-g~~v~viE~~~~~~ 41 (115)
.++||+|||||++|+++|+.|+++ |.+|+|+|+.+.++
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~g 76 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPG 76 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCC
Confidence 357999999999999999999997 99999999987654
No 55
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.07 E-value=1.8e-10 Score=80.39 Aligned_cols=40 Identities=33% Similarity=0.576 Sum_probs=35.1
Q ss_pred CCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 2 ETVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 2 ~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
+.+++||+|||||++|+++|+.|+++|.+|+|+|+.+.++
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g 62 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLG 62 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 3467899999999999999999999999999999987653
No 56
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.07 E-value=3.8e-10 Score=77.40 Aligned_cols=39 Identities=38% Similarity=0.602 Sum_probs=35.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC-CCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS-DGLRG 42 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~-~~~~~ 42 (115)
.++||+|||||++||++|+.|+++|++|+|+|++ +.+++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 4679999999999999999999999999999998 66544
No 57
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.06 E-value=2.7e-10 Score=79.59 Aligned_cols=63 Identities=32% Similarity=0.417 Sum_probs=49.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCC--CceEEEcCCCCCCCccee---------------eeeCccHHHHHHHcCChHHHh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLG--IKPLVLEKSDGLRGTGAA---------------INFAPNAWLALDALGVSHKLA 67 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g--~~v~viE~~~~~~~~~~~---------------~~~~~~~~~~l~~~g~~~~i~ 67 (115)
++||+|||||++||++|+.|+++| ++|+|+|+.+..++...+ ....+...++++++|+...+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~~ 83 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEKLV 83 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGGGEE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcceEe
Confidence 579999999999999999999999 999999998766442211 122455778999999876554
No 58
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.06 E-value=2e-10 Score=77.75 Aligned_cols=39 Identities=36% Similarity=0.572 Sum_probs=34.9
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
|.++++||+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 2 ~m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 335578999999999999999999999999999998764
No 59
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.05 E-value=3.4e-10 Score=78.40 Aligned_cols=38 Identities=34% Similarity=0.409 Sum_probs=34.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~~~ 41 (115)
.++||+|||||++|+++|+.|+++|+ +|+|+|+...++
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~ 43 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPS 43 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCC
Confidence 46899999999999999999999999 999999987654
No 60
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.05 E-value=1.7e-10 Score=82.64 Aligned_cols=40 Identities=30% Similarity=0.433 Sum_probs=35.7
Q ss_pred CCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 2 ETVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 2 ~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
.+.++||+|||||++|+.+|+.|+++|++|+|+|+.+...
T Consensus 15 ~~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~ 54 (561)
T 3da1_A 15 SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFAS 54 (561)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 3456899999999999999999999999999999986543
No 61
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.05 E-value=3.1e-10 Score=78.27 Aligned_cols=39 Identities=38% Similarity=0.519 Sum_probs=35.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcc
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTG 44 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~ 44 (115)
+||+|||||++||++|+.|+++|++|+|+|+++.+++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCcee
Confidence 389999999999999999999999999999988775543
No 62
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.05 E-value=2.6e-10 Score=78.01 Aligned_cols=36 Identities=42% Similarity=0.586 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
++||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 589999999999999999999999999999998764
No 63
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.04 E-value=2.9e-10 Score=78.29 Aligned_cols=39 Identities=33% Similarity=0.428 Sum_probs=35.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcc
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTG 44 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~ 44 (115)
+||+|||||++||++|+.|+++|++|+|+|+.+.+++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCce
Confidence 489999999999999999999999999999988775443
No 64
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.04 E-value=3.8e-10 Score=76.74 Aligned_cols=39 Identities=33% Similarity=0.462 Sum_probs=34.5
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
|...++||+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 1 Mm~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~ 39 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFI 39 (382)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 434578999999999999999999999999999999853
No 65
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.03 E-value=3e-10 Score=75.93 Aligned_cols=41 Identities=24% Similarity=0.324 Sum_probs=35.5
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
|.+.++||+|||||++|+++|+.|++.|++|+|+|+.+..+
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g 41 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG 41 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 44557899999999999999999999999999999987653
No 66
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.03 E-value=3.9e-10 Score=76.72 Aligned_cols=38 Identities=32% Similarity=0.584 Sum_probs=34.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
|++||+|||||++|+++|+.|+++|++|+|+|+.....
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 56899999999999999999999999999999977543
No 67
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.02 E-value=2.6e-10 Score=77.19 Aligned_cols=37 Identities=27% Similarity=0.433 Sum_probs=33.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
|++||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 1 m~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 1 MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp -CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4689999999999999999999999999999998654
No 68
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.02 E-value=3.2e-10 Score=80.33 Aligned_cols=39 Identities=46% Similarity=0.737 Sum_probs=35.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
.++||+|||+|++||++|+.|+++|++|+|+||.+..++
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 468999999999999999999999999999999887643
No 69
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.99 E-value=1.2e-09 Score=76.08 Aligned_cols=44 Identities=23% Similarity=0.363 Sum_probs=38.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceee
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAI 47 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~ 47 (115)
.++||+|||+|++|+++|..|+++|++|+|+|+++..++...+.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccccc
Confidence 35899999999999999999999999999999998776554433
No 70
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.99 E-value=3.2e-10 Score=79.34 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=33.2
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
|+++++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 6666799999999999999999999999999999993
No 71
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.99 E-value=7e-10 Score=76.61 Aligned_cols=40 Identities=30% Similarity=0.466 Sum_probs=36.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCc
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGT 43 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~ 43 (115)
.++||+|||||++|+++|+.|+++|++|+|+|+.+..++.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCc
Confidence 4689999999999999999999999999999998776543
No 72
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.99 E-value=5.8e-10 Score=76.21 Aligned_cols=39 Identities=38% Similarity=0.403 Sum_probs=34.8
Q ss_pred CCccccEEEECCCHHHHHHHHHHHH-CC-CceEEEcCCCCC
Q 047339 2 ETVEKDVVIIGAGIAGLATALALKR-LG-IKPLVLEKSDGL 40 (115)
Q Consensus 2 ~~~~~~v~IvG~G~~Gl~~A~~l~~-~g-~~v~viE~~~~~ 40 (115)
...++||+|||||++|+++|+.|++ +| ++|+|+|+....
T Consensus 18 ~~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~ 58 (405)
T 2gag_B 18 PKKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLA 58 (405)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 3456899999999999999999999 99 999999998743
No 73
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.99 E-value=6.2e-10 Score=75.59 Aligned_cols=37 Identities=27% Similarity=0.312 Sum_probs=34.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.++||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~ 52 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMG 52 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 4689999999999999999999999999999997654
No 74
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.99 E-value=8.9e-10 Score=74.25 Aligned_cols=59 Identities=31% Similarity=0.432 Sum_probs=44.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCCCCcce-------eeeeCccHHHHHHHcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGLRGTGA-------AINFAPNAWLALDALGV 62 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~~~~~~-------~~~~~~~~~~~l~~~g~ 62 (115)
.++||+|||+|++|+++|+.|++. |++|+|+|+.+.+++... ...+.+...++|+.+|+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv 131 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEI 131 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCc
Confidence 356999999999999999999998 999999999877642211 12333455677777765
No 75
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.99 E-value=5.4e-10 Score=73.26 Aligned_cols=36 Identities=36% Similarity=0.555 Sum_probs=33.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
|++||+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 36 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDAGER 36 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 358999999999999999999999999999998653
No 76
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.98 E-value=5.8e-10 Score=77.01 Aligned_cols=37 Identities=35% Similarity=0.513 Sum_probs=34.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.++||+|||||++|+++|+.|+++|.+|+|+|+.+.+
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 3589999999999999999999999999999998765
No 77
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.98 E-value=5.4e-10 Score=76.95 Aligned_cols=37 Identities=38% Similarity=0.501 Sum_probs=33.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~ 40 (115)
.++||+|||||++|+++|+.|+++ |++|+|+|+....
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 458999999999999999999999 9999999997544
No 78
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.98 E-value=4e-10 Score=76.32 Aligned_cols=37 Identities=38% Similarity=0.513 Sum_probs=33.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
+.++||+|||||++|+++|+.|+ +|++|+|+|+.+.+
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 34789999999999999999999 69999999998654
No 79
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.98 E-value=4.4e-10 Score=79.15 Aligned_cols=41 Identities=34% Similarity=0.580 Sum_probs=34.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCc
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGT 43 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~ 43 (115)
++++||+|||||++|+++|+.|++.|++|+|+|+.+..++.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~ 63 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGT 63 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 35689999999999999999999999999999987766543
No 80
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.97 E-value=6.3e-10 Score=78.29 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=32.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
.++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 4589999999999999999999999999999994
No 81
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.97 E-value=1.5e-09 Score=76.35 Aligned_cols=40 Identities=45% Similarity=0.600 Sum_probs=36.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCc
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGT 43 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~ 43 (115)
.++||+|||||++||++|+.|++.|++|+|+|+.+..++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 3579999999999999999999999999999998876554
No 82
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.97 E-value=4.2e-10 Score=80.63 Aligned_cols=40 Identities=30% Similarity=0.532 Sum_probs=36.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
+.++||+|||+|++|+++|+.|+++|++|+|+|+.+..++
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg 158 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGG 158 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 3568999999999999999999999999999999887643
No 83
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.96 E-value=9.5e-10 Score=70.60 Aligned_cols=35 Identities=34% Similarity=0.498 Sum_probs=32.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+++||+|||||++|+.+|+.|++.|.+|+|+|+..
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 35899999999999999999999999999999873
No 84
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.95 E-value=6.8e-10 Score=74.00 Aligned_cols=36 Identities=39% Similarity=0.528 Sum_probs=32.9
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+++||+|||||++|+++|+.|++.|++|+|+|+.+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 356899999999999999999999999999999954
No 85
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.95 E-value=1.1e-09 Score=76.38 Aligned_cols=39 Identities=31% Similarity=0.377 Sum_probs=35.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCCCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGI--KPLVLEKSDGLR 41 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~~~~ 41 (115)
.+.+||+|||||++|+++|..|++.|. +|+|+|+.+..+
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~G 44 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPG 44 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCC
Confidence 356899999999999999999999999 999999986553
No 86
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.95 E-value=1.3e-09 Score=76.82 Aligned_cols=42 Identities=36% Similarity=0.478 Sum_probs=36.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCC-CceEEEcCCCCCCCcc
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLG-IKPLVLEKSDGLRGTG 44 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g-~~v~viE~~~~~~~~~ 44 (115)
.+++||+|||||++||++|+.|+++| .+|+|+|+.+.+++..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~ 49 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLS 49 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCee
Confidence 34689999999999999999999998 7999999998775543
No 87
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.94 E-value=7.7e-10 Score=74.43 Aligned_cols=37 Identities=35% Similarity=0.496 Sum_probs=33.9
Q ss_pred ccEEEECCCHHHHHHHHHHHH---CCCceEEEcCCCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKR---LGIKPLVLEKSDGLRG 42 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~---~g~~v~viE~~~~~~~ 42 (115)
+||+|||||++|+++|+.|++ +|++|+|+|+....++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 689999999999999999999 9999999999876543
No 88
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.93 E-value=6.6e-10 Score=78.42 Aligned_cols=38 Identities=34% Similarity=0.496 Sum_probs=34.5
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|++.++||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 44456899999999999999999999999999999975
No 89
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.93 E-value=1.1e-09 Score=72.49 Aligned_cols=34 Identities=35% Similarity=0.479 Sum_probs=32.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
+++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 3589999999999999999999999999999997
No 90
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.93 E-value=6.9e-10 Score=77.75 Aligned_cols=40 Identities=35% Similarity=0.499 Sum_probs=35.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCc
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGT 43 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~ 43 (115)
+++||+|||||++|+++|..|++.|++|+|+|+.+..++.
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~ 42 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGN 42 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 4689999999999999999999999999999987776544
No 91
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.93 E-value=1.4e-09 Score=77.91 Aligned_cols=39 Identities=33% Similarity=0.550 Sum_probs=35.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
.++||+|||+|++|+++|+.|+++|++|+|+|+.+..++
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg 163 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGG 163 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 468999999999999999999999999999999887643
No 92
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.93 E-value=1.1e-09 Score=73.25 Aligned_cols=37 Identities=32% Similarity=0.581 Sum_probs=34.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
++||+|||||++|+++|+.|+++|++|+|+|+.+.++
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g 39 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG 39 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 4799999999999999999999999999999987643
No 93
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.93 E-value=1.5e-09 Score=74.11 Aligned_cols=38 Identities=39% Similarity=0.623 Sum_probs=34.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCc
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGT 43 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~ 43 (115)
+|++|||||++|+++|+.|+++|++|+|+|+.+.+++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 69999999999999999999999999999998876554
No 94
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.92 E-value=1.9e-09 Score=78.85 Aligned_cols=36 Identities=36% Similarity=0.416 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
++||+|||||++|+++|+.|+++|++|+|+|+...+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 479999999999999999999999999999997654
No 95
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.91 E-value=1.3e-09 Score=77.82 Aligned_cols=37 Identities=41% Similarity=0.490 Sum_probs=33.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
.++||+|||+|++||++|+.|++ |.+|+|+||.+..+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC
Confidence 46899999999999999999999 99999999987653
No 96
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.91 E-value=1.2e-09 Score=78.52 Aligned_cols=37 Identities=38% Similarity=0.493 Sum_probs=34.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.++||+|||||++|+++|+.|+++|++|+|+|+.+..
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~ 67 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFA 67 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4689999999999999999999999999999998654
No 97
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.91 E-value=1.3e-09 Score=72.47 Aligned_cols=37 Identities=30% Similarity=0.270 Sum_probs=34.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
.+||+|||||++|+++|+.|++.|++|+|+|+.+..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g 43 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG 43 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC
Confidence 5799999999999999999999999999999987654
No 98
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.90 E-value=1.6e-09 Score=72.06 Aligned_cols=34 Identities=41% Similarity=0.641 Sum_probs=31.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
+++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3589999999999999999999999999999985
No 99
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.90 E-value=1.3e-09 Score=79.59 Aligned_cols=40 Identities=33% Similarity=0.474 Sum_probs=36.5
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
|.+.++||+|||+|++||++|+.|+++|.+|+|+|+....
T Consensus 1 M~~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp CCEEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred CCcccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 6666799999999999999999999999999999997654
No 100
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.90 E-value=2.1e-09 Score=72.59 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=34.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
++||+|||||++|+++|+.|++.|++|+|+|+.+..+
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g 50 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG 50 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 5799999999999999999999999999999987653
No 101
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.89 E-value=2.3e-09 Score=75.20 Aligned_cols=36 Identities=39% Similarity=0.661 Sum_probs=33.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.++||+|||||++|+++|+.|++.|++|+|+|+.+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 468999999999999999999999999999999864
No 102
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.89 E-value=1.2e-09 Score=73.00 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=31.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEK 36 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~ 36 (115)
.++||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 358999999999999999999999999999998
No 103
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.88 E-value=1.2e-09 Score=78.96 Aligned_cols=40 Identities=35% Similarity=0.488 Sum_probs=36.4
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCC--CceEEEcCCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLG--IKPLVLEKSDGL 40 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g--~~v~viE~~~~~ 40 (115)
|++.++||+|||+|++||++|+.|+++| .+|+|+|+.+..
T Consensus 1 m~~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 1 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred CCcccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 6677899999999999999999999999 999999997643
No 104
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.87 E-value=3.3e-09 Score=74.98 Aligned_cols=36 Identities=36% Similarity=0.541 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
++||+|||||++|+++|+.|+++|++|+|+|+.+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~ 38 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLA 38 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 579999999999999999999999999999997643
No 105
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.87 E-value=2.1e-09 Score=76.89 Aligned_cols=36 Identities=28% Similarity=0.660 Sum_probs=33.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+++||+|||||++|+++|+.|++.|++|+|+|+.+.
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 357999999999999999999999999999999854
No 106
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.87 E-value=1.7e-09 Score=77.90 Aligned_cols=37 Identities=38% Similarity=0.418 Sum_probs=34.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.++||+|||+|++||++|+.|+++|.+|+|+||.+..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 4689999999999999999999999999999998654
No 107
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.87 E-value=2.8e-09 Score=77.77 Aligned_cols=36 Identities=31% Similarity=0.432 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.+||+|||||++|+++|+.|+++|++|+|+|+...+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 379999999999999999999999999999997544
No 108
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.87 E-value=3.4e-09 Score=72.75 Aligned_cols=38 Identities=26% Similarity=0.547 Sum_probs=34.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
++||+|||||++|+++|+.|+++|++|+|+|+.+..++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 36999999999999999999999999999999887654
No 109
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.86 E-value=1.8e-09 Score=71.62 Aligned_cols=35 Identities=26% Similarity=0.516 Sum_probs=32.5
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
.+++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 45689999999999999999999999999999965
No 110
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.86 E-value=2.5e-09 Score=70.58 Aligned_cols=35 Identities=46% Similarity=0.630 Sum_probs=32.3
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEE-EcCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLV-LEKS 37 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~v-iE~~ 37 (115)
..++||+|||||++|+++|+.|+++|++|+| +|+.
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~ 37 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG 37 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 3458999999999999999999999999999 9983
No 111
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.85 E-value=1.3e-09 Score=76.67 Aligned_cols=39 Identities=36% Similarity=0.589 Sum_probs=35.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
+++||+|||||++|+++|+.|++.|++|+|+|+.+..++
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG 43 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGG 43 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 468999999999999999999999999999999766543
No 112
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.85 E-value=2.5e-09 Score=74.93 Aligned_cols=39 Identities=36% Similarity=0.598 Sum_probs=35.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
+++||+|||||++|+++|+.|++.|++|+|+|+.+..++
T Consensus 1 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG 39 (468)
T 2qae_A 1 NPYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGG 39 (468)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 358999999999999999999999999999999876543
No 113
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.84 E-value=4.1e-09 Score=73.90 Aligned_cols=37 Identities=27% Similarity=0.447 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHH---CCCc---eEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKR---LGIK---PLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~---~g~~---v~viE~~~~~~ 41 (115)
.+||+|||||++|+++|..|++ .|++ |+|+|+.+..+
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G 44 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG 44 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC
Confidence 4799999999999999999999 9999 99999987654
No 114
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.84 E-value=4.6e-09 Score=74.92 Aligned_cols=38 Identities=34% Similarity=0.568 Sum_probs=34.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
.++||+|||||++|+++|+.|++.|++|+|+|+.+..+
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G 52 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG 52 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 35899999999999999999999999999999987653
No 115
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.83 E-value=5e-09 Score=74.91 Aligned_cols=38 Identities=32% Similarity=0.581 Sum_probs=34.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
+++||+|||||++|+.+|+.|++.|++|+|+|+.+..+
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~G 45 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVG 45 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45799999999999999999999999999999987654
No 116
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.83 E-value=3.8e-09 Score=74.15 Aligned_cols=35 Identities=34% Similarity=0.542 Sum_probs=32.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.++||+|||||++|+++|+.|++.|++|+|+|+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 46899999999999999999999999999999763
No 117
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.83 E-value=4.4e-09 Score=70.09 Aligned_cols=33 Identities=48% Similarity=0.705 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 579999999999999999999999999999998
No 118
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.82 E-value=5.2e-09 Score=64.39 Aligned_cols=35 Identities=43% Similarity=0.684 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
+|++|||||++|+.+|..|++.|.+|+|+|+.+..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~ 36 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSK 36 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCT
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCc
Confidence 79999999999999999999999999999987643
No 119
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.82 E-value=3.7e-09 Score=74.32 Aligned_cols=34 Identities=32% Similarity=0.520 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
++||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999999999999974
No 120
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.82 E-value=4e-09 Score=73.91 Aligned_cols=38 Identities=32% Similarity=0.615 Sum_probs=33.0
Q ss_pred CCCc-cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 1 METV-EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 1 m~~~-~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|..| ++||+|||||++|+.+|..|++.|++|+|+|+.+
T Consensus 1 m~~m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 1 MTPMKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp ---CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCcccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4444 4899999999999999999999999999999976
No 121
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.82 E-value=4.4e-09 Score=74.06 Aligned_cols=35 Identities=34% Similarity=0.443 Sum_probs=32.6
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
++++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 45799999999999999999999999999999973
No 122
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.82 E-value=5.1e-09 Score=73.26 Aligned_cols=40 Identities=45% Similarity=0.669 Sum_probs=35.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCc
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGT 43 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~ 43 (115)
.++||+|||||++|+++|..|++.|++|+|+|+.+..++.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~ 44 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGT 44 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccc
Confidence 4689999999999999999999999999999998766443
No 123
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.82 E-value=5e-09 Score=74.03 Aligned_cols=35 Identities=34% Similarity=0.496 Sum_probs=32.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|++||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999984
No 124
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.81 E-value=2.7e-09 Score=71.92 Aligned_cols=34 Identities=35% Similarity=0.447 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC------CceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLG------IKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g------~~v~viE~~~~ 39 (115)
+||+|||||++|+++|+.|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 38999999999999999999998 99999999864
No 125
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.81 E-value=6.4e-09 Score=72.92 Aligned_cols=38 Identities=37% Similarity=0.483 Sum_probs=34.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
..++|+||||||+|+++|+.|++.|++|+|||+.+..+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCC
Confidence 35799999999999999999999999999999987654
No 126
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.81 E-value=2.4e-09 Score=75.09 Aligned_cols=38 Identities=39% Similarity=0.578 Sum_probs=34.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
.++||+|||||++|+++|+.|++.|++|+|+|+.+..+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~G 41 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLG 41 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcC
Confidence 35899999999999999999999999999999976554
No 127
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.81 E-value=3.9e-09 Score=73.31 Aligned_cols=34 Identities=38% Similarity=0.508 Sum_probs=31.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCC-CceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLG-IKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g-~~v~viE~~ 37 (115)
.++||+|||||++|+++|+.|+++| .+|+|+|+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 3579999999999999999999999 999999993
No 128
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.81 E-value=4.8e-09 Score=74.92 Aligned_cols=38 Identities=34% Similarity=0.600 Sum_probs=34.5
Q ss_pred ccccEEEECCCHHHHHHHHHHH-HCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALK-RLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~-~~g~~v~viE~~~~~~ 41 (115)
+++||+|||||++|+.+|+.|+ +.|++|+|+|+.+..+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~G 45 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPG 45 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCC
Confidence 3579999999999999999999 9999999999987654
No 129
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.81 E-value=5.7e-09 Score=74.68 Aligned_cols=38 Identities=34% Similarity=0.581 Sum_probs=34.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
.++||+|||||++|+.+|+.|++.|++|+|+|+.+..+
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G 57 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVG 57 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45799999999999999999999999999999977654
No 130
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.80 E-value=7.7e-09 Score=72.88 Aligned_cols=41 Identities=29% Similarity=0.399 Sum_probs=36.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcc
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTG 44 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~ 44 (115)
.++||+|||+|++|+++|+.|+++|.+|+++|+++..++..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGET 59 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 35899999999999999999999999999999998776543
No 131
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.80 E-value=5.7e-09 Score=70.49 Aligned_cols=34 Identities=47% Similarity=0.790 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
++||+|||||++|+++|..|++.|+ +|+|+|+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 5799999999999999999999999 999999886
No 132
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.80 E-value=4.8e-09 Score=73.58 Aligned_cols=40 Identities=35% Similarity=0.694 Sum_probs=35.6
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
.+++||+|||||++|+++|..|++.|++|+|+|+.+..++
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGG 43 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCC
Confidence 3568999999999999999999999999999999876543
No 133
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.79 E-value=5.7e-09 Score=76.17 Aligned_cols=37 Identities=22% Similarity=0.357 Sum_probs=33.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHC------CCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRL------GIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~------g~~v~viE~~~~~ 40 (115)
.++||+|||+|++||++|+.|++. |.+|+|+||....
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 468999999999999999999997 9999999997643
No 134
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.79 E-value=8.2e-09 Score=73.34 Aligned_cols=39 Identities=31% Similarity=0.468 Sum_probs=35.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
.++||+|||||++|+++|+.|++.|++|+|+|+.+..++
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG 80 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGG 80 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 358999999999999999999999999999999875543
No 135
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.78 E-value=5.5e-09 Score=69.99 Aligned_cols=34 Identities=41% Similarity=0.664 Sum_probs=31.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
+++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4589999999999999999999999999999975
No 136
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.78 E-value=4.7e-09 Score=76.12 Aligned_cols=37 Identities=35% Similarity=0.431 Sum_probs=33.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.++||+|||+|++||++|+.|+++|.+|+|+|+....
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~ 53 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPT 53 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 4579999999999999999999999999999997653
No 137
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.78 E-value=8.6e-09 Score=73.20 Aligned_cols=34 Identities=38% Similarity=0.578 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
++||+||||||+|+.+|+.|++.|++|+|+|+.+
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 5899999999999999999999999999999864
No 138
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.78 E-value=5.1e-09 Score=72.98 Aligned_cols=37 Identities=30% Similarity=0.485 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCC-----CceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLG-----IKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g-----~~v~viE~~~~~~ 41 (115)
.+||+|||||++|+++|..|++.| ++|+|+|+.+..+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 469999999999999999999999 9999999988643
No 139
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.78 E-value=5.6e-09 Score=72.87 Aligned_cols=38 Identities=39% Similarity=0.610 Sum_probs=34.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
++||+|||||++|+++|..|++.|++|+|+|+.+..++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG 38 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGG 38 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCC
Confidence 37999999999999999999999999999999865543
No 140
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.77 E-value=8.5e-09 Score=68.21 Aligned_cols=33 Identities=39% Similarity=0.592 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
+||+|||||++|+++|+.|++.|+ +|+|+|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~ 35 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM 35 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC
Confidence 799999999999999999999999 999999853
No 141
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.77 E-value=8.9e-09 Score=72.14 Aligned_cols=35 Identities=29% Similarity=0.431 Sum_probs=32.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.++||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 45899999999999999999999999999999973
No 142
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.76 E-value=7.6e-09 Score=72.22 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=32.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.++||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 46899999999999999999999999999999973
No 143
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.76 E-value=9.6e-09 Score=74.50 Aligned_cols=35 Identities=43% Similarity=0.598 Sum_probs=32.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.++||+|||||++|+.+|+.|++.|.+|+|+|++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 35899999999999999999999999999999874
No 144
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.76 E-value=9.3e-09 Score=75.26 Aligned_cols=39 Identities=33% Similarity=0.505 Sum_probs=35.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
.++||+|||||++|+++|+.|+++|++|+|+|+.+..++
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG 428 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGG 428 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 357999999999999999999999999999999876644
No 145
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.75 E-value=8.3e-09 Score=71.99 Aligned_cols=37 Identities=27% Similarity=0.457 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~~ 41 (115)
++||+|||||++|+++|..|++. |++|+|+|+.+..+
T Consensus 2 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 2 SLKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 36999999999999999999998 89999999988654
No 146
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.75 E-value=1.1e-08 Score=71.71 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=32.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
.++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999999999999999999999999999987
No 147
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.75 E-value=1.2e-08 Score=71.82 Aligned_cols=33 Identities=33% Similarity=0.447 Sum_probs=31.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEK 36 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~ 36 (115)
.++||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 468999999999999999999999999999995
No 148
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.75 E-value=8.5e-09 Score=72.13 Aligned_cols=33 Identities=33% Similarity=0.621 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 479999999999999999999999999999997
No 149
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.75 E-value=1e-08 Score=74.56 Aligned_cols=34 Identities=41% Similarity=0.612 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
++||+|||||++|+.+|+.|++.|.+|+|+|++.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 5899999999999999999999999999999874
No 150
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.75 E-value=1.7e-08 Score=70.69 Aligned_cols=41 Identities=39% Similarity=0.702 Sum_probs=34.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCCCCCc
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDGLRGT 43 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~~~~~ 43 (115)
+.++||+|||+|++|+++|+.|++.|+ +|+|+|+.+.+++.
T Consensus 2 ~~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 2 TVGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGR 43 (472)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCc
Confidence 346899999999999999999999998 89999998876543
No 151
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.74 E-value=1e-08 Score=74.41 Aligned_cols=35 Identities=37% Similarity=0.527 Sum_probs=33.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.++||+|||||++|+.+|+.|++.|.+|+|+|+..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 46899999999999999999999999999999874
No 152
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.73 E-value=6.9e-09 Score=73.26 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=32.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHC---CCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRL---GIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~---g~~v~viE~~~ 38 (115)
|++||+|||||++|+++|+.|++. |++|+|+|+.+
T Consensus 1 M~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 1 MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 358999999999999999999999 99999999986
No 153
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.73 E-value=1.4e-08 Score=73.70 Aligned_cols=38 Identities=32% Similarity=0.387 Sum_probs=35.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
++||+|||||++|+++|+.|+++|++|+|+|+.+..++
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 58999999999999999999999999999999877653
No 154
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.72 E-value=1.4e-08 Score=70.89 Aligned_cols=34 Identities=32% Similarity=0.625 Sum_probs=32.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
+++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4589999999999999999999999999999997
No 155
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.72 E-value=2.3e-08 Score=69.10 Aligned_cols=34 Identities=35% Similarity=0.552 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+||+|||||++|+.+|+.|++.|++|+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 6999999999999999999999999999998763
No 156
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.71 E-value=1.4e-08 Score=67.06 Aligned_cols=33 Identities=36% Similarity=0.549 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
++||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~ 33 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER 33 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 479999999999999999999999999999864
No 157
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.71 E-value=1.6e-08 Score=75.29 Aligned_cols=36 Identities=36% Similarity=0.398 Sum_probs=33.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~ 39 (115)
.++||+|||||++|+++|+.|+++|+ +|+|+|+...
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 35899999999999999999999998 9999999875
No 158
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.71 E-value=1.6e-08 Score=70.16 Aligned_cols=36 Identities=33% Similarity=0.561 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHHH--CCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKR--LGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~--~g~~v~viE~~~~~ 40 (115)
++||+|||||++|+++|+.|++ .|++|+|+|+++..
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 4799999999999999999999 88999999998654
No 159
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.71 E-value=2.2e-08 Score=73.81 Aligned_cols=38 Identities=26% Similarity=0.454 Sum_probs=34.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
++||+|||||++|+.+|..|++.|++|+|+|+.+..++
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG 426 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGG 426 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 57999999999999999999999999999999877644
No 160
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.70 E-value=1.9e-08 Score=73.19 Aligned_cols=36 Identities=36% Similarity=0.586 Sum_probs=32.9
Q ss_pred ccccEEEECCCHHHHHHHHHHH---H-CCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALK---R-LGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~---~-~g~~v~viE~~~~ 39 (115)
.++||+|||||++||++|+.|+ + +|.+|+|+||...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4589999999999999999999 6 8999999999874
No 161
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.69 E-value=2.6e-08 Score=70.06 Aligned_cols=31 Identities=45% Similarity=0.724 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
||+|||+|++|+++|+.|++.|.+|+|+|+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999999999999999999999998
No 162
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.69 E-value=1.7e-08 Score=71.22 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=30.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHH-CCCceEEEc
Q 047339 4 VEKDVVIIGAGIAGLATALALKR-LGIKPLVLE 35 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~-~g~~v~viE 35 (115)
.++||+|||||++|+++|+.|++ .|++|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 35899999999999999999999 999999999
No 163
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.68 E-value=2.6e-08 Score=69.25 Aligned_cols=38 Identities=26% Similarity=0.519 Sum_probs=33.9
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGI--KPLVLEKSDGL 40 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~~~ 40 (115)
++++||+|||||++|+.+|..|++.|. +|+|+|+.+..
T Consensus 2 ~~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~ 41 (431)
T 1q1r_A 2 NANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVI 41 (431)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSC
T ss_pred CCCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCC
Confidence 356899999999999999999999998 79999987653
No 164
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.68 E-value=2.1e-08 Score=70.18 Aligned_cols=34 Identities=29% Similarity=0.602 Sum_probs=32.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
.++|++|||||++|+.+|..|++.|++|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4689999999999999999999999999999993
No 165
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.68 E-value=2.8e-08 Score=68.56 Aligned_cols=37 Identities=38% Similarity=0.629 Sum_probs=33.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCc--eEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIK--PLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~--v~viE~~~~~ 40 (115)
+++||+|||||++|+++|..|++.|++ |+|+|+.+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI 46 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC
Confidence 468999999999999999999999987 9999997754
No 166
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.67 E-value=1.3e-08 Score=71.89 Aligned_cols=31 Identities=32% Similarity=0.528 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHH-CCCceEEEc
Q 047339 5 EKDVVIIGAGIAGLATALALKR-LGIKPLVLE 35 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~-~g~~v~viE 35 (115)
++||+|||||++|+++|+.|++ .|++|+|+|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 5899999999999999999999 999999999
No 167
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.67 E-value=2.8e-08 Score=71.35 Aligned_cols=38 Identities=45% Similarity=0.553 Sum_probs=34.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
..+||+|||+|++|+++|+.|+++|++|+|+|+.+..+
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~ 162 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPG 162 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 35799999999999999999999999999999988664
No 168
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.66 E-value=1.7e-08 Score=70.12 Aligned_cols=38 Identities=32% Similarity=0.503 Sum_probs=34.3
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHH---CCCceEEEcCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKR---LGIKPLVLEKSDG 39 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~---~g~~v~viE~~~~ 39 (115)
|+.| ++|+|||||++|+++|..|++ .|++|+|+|+.+.
T Consensus 1 M~~m-~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 1 MRGS-AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CTTS-CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCCC-CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 6555 799999999999999999999 8999999998875
No 169
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.66 E-value=3.3e-08 Score=70.51 Aligned_cols=37 Identities=35% Similarity=0.486 Sum_probs=34.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+|++|||+|++|+++|..|++.|.+|+|+|+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4689999999999999999999999999999998653
No 170
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.66 E-value=2.7e-08 Score=71.14 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=32.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+||++|||+||+|+.+|..+++.|.+|.|+|+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 36899999999999999999999999999999754
No 171
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.66 E-value=3.8e-08 Score=71.80 Aligned_cols=38 Identities=39% Similarity=0.698 Sum_probs=35.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
.++|+|||+|++|+++|+.|++.|++|+|+|+.+.+++
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 47999999999999999999999999999999887654
No 172
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.65 E-value=3.5e-08 Score=72.03 Aligned_cols=38 Identities=29% Similarity=0.511 Sum_probs=34.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
++||+|||||++|+.+|..|++.|++|+|+|+.+..++
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg 410 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGG 410 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 57999999999999999999999999999999876543
No 173
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.65 E-value=3.8e-08 Score=67.89 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=33.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGI--KPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~~~ 40 (115)
+++||+|||||++|+++|..|++.|. +|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 46899999999999999999999998 59999998754
No 174
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.64 E-value=2.5e-08 Score=70.61 Aligned_cols=36 Identities=31% Similarity=0.436 Sum_probs=32.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHH-CCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKR-LGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~-~g~~v~viE~~~~ 39 (115)
.++|+||||+|++|+.+|..|++ .+++|+|+|+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 46899999999999999999998 6799999998754
No 175
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.64 E-value=1.8e-08 Score=70.59 Aligned_cols=36 Identities=31% Similarity=0.418 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~ 40 (115)
++||+|||||++|+++|..|++. |++|+|+|+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 46999999999999999999998 8999999998774
No 176
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.64 E-value=3.3e-08 Score=68.88 Aligned_cols=37 Identities=41% Similarity=0.540 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~~ 41 (115)
++||+|||||++|+++|..|++. +++|+|+|+.+...
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 37999999999999999999998 78999999988653
No 177
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.64 E-value=3.2e-08 Score=71.09 Aligned_cols=37 Identities=22% Similarity=0.426 Sum_probs=33.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~ 40 (115)
++++|+|||||++|+++|..|++. |++|+|+|+.+..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 457999999999999999999998 8999999998875
No 178
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.63 E-value=6e-08 Score=72.59 Aligned_cols=38 Identities=39% Similarity=0.698 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
.++|+|||+|++||++|+.|+++|++|+|+|+.+.+++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 47999999999999999999999999999999887654
No 179
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.63 E-value=4.6e-08 Score=67.52 Aligned_cols=36 Identities=33% Similarity=0.530 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCc--eEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIK--PLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~--v~viE~~~~~ 40 (115)
+++|+|||||++|+++|..|++.|++ |+|+|+.+..
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHL 39 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSS
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCC
Confidence 46899999999999999999999987 9999988764
No 180
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.62 E-value=1.7e-08 Score=71.30 Aligned_cols=38 Identities=39% Similarity=0.599 Sum_probs=34.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
.++||+|||||++|+++|+.|++. ++|+|+|+.+..++
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG 144 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGG 144 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSC
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCC
Confidence 357999999999999999999999 99999999876643
No 181
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.62 E-value=4.4e-08 Score=66.96 Aligned_cols=36 Identities=33% Similarity=0.554 Sum_probs=31.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCC--CceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLG--IKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g--~~v~viE~~~~ 39 (115)
.++||+|||||++|+++|..|++.| .+|+++|++..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g 40 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDG 40 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 3589999999999999999999998 56899998753
No 182
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.62 E-value=3e-08 Score=69.91 Aligned_cols=37 Identities=19% Similarity=0.269 Sum_probs=33.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCC---CceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLG---IKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g---~~v~viE~~~~~ 40 (115)
|++||+|||||++|+.+|..|++.| .+|+|+|+.+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 4589999999999999999999988 999999998754
No 183
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.61 E-value=5e-08 Score=72.38 Aligned_cols=38 Identities=55% Similarity=0.776 Sum_probs=34.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
.+||+|||||++|+++|+.|++.|++|+|+|+.+..++
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 47999999999999999999999999999999876654
No 184
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.61 E-value=4.4e-08 Score=70.55 Aligned_cols=34 Identities=32% Similarity=0.556 Sum_probs=31.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
.++||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4689999999999999999999999999999973
No 185
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.61 E-value=5.2e-08 Score=69.27 Aligned_cols=34 Identities=35% Similarity=0.495 Sum_probs=31.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
.++||+||||||+|+++|+.|++.|++|+|+|+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~ 244 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER 244 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 3689999999999999999999999999999864
No 186
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.60 E-value=6e-08 Score=66.74 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI--KPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~~~ 40 (115)
+++|+|||||++|+++|..|++.|+ +|+|+|+.+..
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 3689999999999999999999998 89999998753
No 187
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.60 E-value=4.1e-08 Score=67.56 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHH---CCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKR---LGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~---~g~~v~viE~~~~ 39 (115)
++|+|||||++|+++|..|++ .|++|+|+|+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 589999999999999999999 8999999998874
No 188
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.59 E-value=6.9e-08 Score=73.49 Aligned_cols=38 Identities=32% Similarity=0.521 Sum_probs=34.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~~~~ 42 (115)
.+||+||||||+|+++|..|++.|+ +|+|||+.+..++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG 225 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGG 225 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCST
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCc
Confidence 4699999999999999999999999 7999999876543
No 189
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.57 E-value=4.9e-08 Score=68.41 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHHH-C------CCceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKR-L------GIKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~-~------g~~v~viE~~~~~~ 41 (115)
+++|+|||||++|+.+|..|++ . |++|+|+|+.+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g 46 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW 46 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC
Confidence 5799999999999999999999 7 99999999987654
No 190
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.57 E-value=6.4e-08 Score=73.26 Aligned_cols=38 Identities=37% Similarity=0.611 Sum_probs=34.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRG 42 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~ 42 (115)
++||+|||+||+|+.+|..|++.|++|+|+|+.+.+++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG 165 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGG 165 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCc
Confidence 57999999999999999999999999999999876653
No 191
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.55 E-value=7.1e-08 Score=67.25 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=32.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~ 40 (115)
+||+|||||++|+++|..|++. |.+|+|+|+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 4899999999999999999998 9999999998754
No 192
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.54 E-value=9.4e-08 Score=67.07 Aligned_cols=38 Identities=24% Similarity=0.209 Sum_probs=34.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCC--CceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLG--IKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g--~~v~viE~~~~~~ 41 (115)
.+++|+|||+|++|+.+|..|++.| ++|+|+|+.+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 4689999999999999999999988 9999999987764
No 193
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.53 E-value=8.6e-08 Score=66.56 Aligned_cols=36 Identities=36% Similarity=0.582 Sum_probs=31.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCC--CceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLG--IKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g--~~v~viE~~~~ 39 (115)
|.++|+|||||++|+++|..|++.+ ++|+|+|+++.
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 4468999999999999999999865 89999998764
No 194
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.53 E-value=8.7e-08 Score=69.02 Aligned_cols=36 Identities=33% Similarity=0.414 Sum_probs=33.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCC-CceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLG-IKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g-~~v~viE~~~~ 39 (115)
..+|+||||||.+||++|..|++.+ .+|+|+|+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999987 79999999765
No 195
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.53 E-value=4.6e-08 Score=69.81 Aligned_cols=35 Identities=37% Similarity=0.451 Sum_probs=32.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.++|+||||+|++|+++|..|++ |.+|+|+|+...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 35899999999999999999999 999999999865
No 196
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.51 E-value=1e-07 Score=66.36 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~ 40 (115)
+||+|||||++|+.+|..|++. |.+|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999998 9999999998764
No 197
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.49 E-value=3.6e-07 Score=66.53 Aligned_cols=57 Identities=25% Similarity=0.316 Sum_probs=49.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALG 61 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g 61 (115)
+++|++|||+|+.|+.+|..|++.|.+|+++|+++..++......+ ....+|+++..
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l-~~l~~w~~~~~ 63 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSF-SGLLSWLKEYQ 63 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH-HHHHHHHHHTC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccH-HHHHHHHHHhh
Confidence 4799999999999999999999999999999999998877766664 35677777765
No 198
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.49 E-value=1.4e-07 Score=66.40 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=32.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~ 40 (115)
+||+|||||++|+++|..|++. |.+|+|+|+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 6999999999999999999996 8999999998765
No 199
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.48 E-value=1.4e-07 Score=67.27 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=32.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGLR 41 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~~ 41 (115)
++|+|||||++|+++|..|++. +++|+|+|+.+...
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 5899999999999999999998 89999999987753
No 200
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.48 E-value=1.3e-07 Score=64.45 Aligned_cols=34 Identities=29% Similarity=0.365 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
-|++|||||++|+.+|..|++.| +|+|+|+.+..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 58999999999999999999999 99999988753
No 201
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.48 E-value=1.6e-07 Score=67.13 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=35.0
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHC-CCceEEEcCCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRL-GIKPLVLEKSDGL 40 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~-g~~v~viE~~~~~ 40 (115)
|+.+.+|++|||+|++|+.+|..|++. |.+|+|+|+....
T Consensus 9 ~~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 9 LSDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CCCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 344679999999999999999999998 8999999987543
No 202
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.47 E-value=1.5e-07 Score=67.82 Aligned_cols=35 Identities=37% Similarity=0.539 Sum_probs=32.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHC-CCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRL-GIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~-g~~v~viE~~~ 38 (115)
..+|+||||||.+||++|..|++. +.+|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 468999999999999999999974 89999999987
No 203
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.47 E-value=2.1e-07 Score=67.13 Aligned_cols=38 Identities=37% Similarity=0.410 Sum_probs=34.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHH-CCCceEEEcCCCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKR-LGIKPLVLEKSDGL 40 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~-~g~~v~viE~~~~~ 40 (115)
..++|++|||+|++|+++|..|++ .|.+|+|+|+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 356899999999999999999999 89999999987643
No 204
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.45 E-value=2e-07 Score=65.81 Aligned_cols=36 Identities=25% Similarity=0.480 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~ 40 (115)
++||+|||||++|+.+|..|++. +.+|+|+|+.+..
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 57999999999999999999887 8999999998654
No 205
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=98.45 E-value=1.3e-07 Score=69.65 Aligned_cols=36 Identities=28% Similarity=0.511 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCC--------CceEEEcCCC-CC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLG--------IKPLVLEKSD-GL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g--------~~v~viE~~~-~~ 40 (115)
+++|+|||||++||++|+.|++.| ++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999998 9999999987 55
No 206
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.42 E-value=3.1e-07 Score=63.04 Aligned_cols=37 Identities=24% Similarity=0.269 Sum_probs=33.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.+++|+|||||++|+.+|..|...+.+|+|+|+.+..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 3579999999999999999998889999999998765
No 207
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.41 E-value=2.5e-07 Score=63.39 Aligned_cols=34 Identities=26% Similarity=0.485 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC--CceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLG--IKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g--~~v~viE~~~~ 39 (115)
++|+|||||++|+++|..|++.+ .+|+|+|+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 57999999999999999998866 68999998764
No 208
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.40 E-value=4.1e-07 Score=64.45 Aligned_cols=38 Identities=29% Similarity=0.377 Sum_probs=34.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..++|++|||+|++|+++|..|++.|.+|+|+|+....
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 34689999999999999999999999999999988643
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.39 E-value=2.2e-07 Score=65.85 Aligned_cols=36 Identities=11% Similarity=0.195 Sum_probs=32.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+++|+|||||++|+.+|..|++.+++|+|+|+++.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 356899999999999999999999999999998763
No 210
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.38 E-value=1.5e-07 Score=67.67 Aligned_cols=36 Identities=36% Similarity=0.411 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHH-CCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKR-LGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~-~g~~v~viE~~~~~ 40 (115)
.+|+||||+|.+|+++|..|++ .+.+|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999999 78999999987543
No 211
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.38 E-value=2.9e-07 Score=64.10 Aligned_cols=35 Identities=26% Similarity=0.494 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC--CceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLG--IKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g--~~v~viE~~~~~ 40 (115)
++|+|||||++|+++|..|++.| .+|+|+|+.+..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 47999999999999999999988 579999987754
No 212
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.35 E-value=6.1e-07 Score=63.63 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=33.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.++|++|||+|++|+.+|..|++.|.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 468999999999999999999999999999998764
No 213
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.13 E-value=2.9e-06 Score=59.06 Aligned_cols=38 Identities=32% Similarity=0.435 Sum_probs=34.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
...+++|||+|++|+.+|..|++.|.+|+++|+.+.+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 185 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPL 185 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccc
Confidence 35789999999999999999999999999999987653
No 214
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.11 E-value=3.6e-06 Score=57.77 Aligned_cols=58 Identities=22% Similarity=0.137 Sum_probs=41.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGV 62 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~ 62 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+.+......-.......+.+++.|+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 203 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGI 203 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCC
Confidence 3689999999999999999999999999999987754332111122223344555554
No 215
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.03 E-value=8.9e-06 Score=48.14 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=33.5
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.++.+++|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3567899999999999999999999999999998764
No 216
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.00 E-value=1.1e-05 Score=56.51 Aligned_cols=58 Identities=29% Similarity=0.346 Sum_probs=42.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||||+.|+.+|..|++.|.+|+++|+.+.+.+ ...-.+.....+.+++.|+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~ 240 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQKFLKKQGLD 240 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-SSCHHHHHHHHHHHHHTTCE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-ccCHHHHHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999876533 11111222334556666654
No 217
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=8.6e-06 Score=56.95 Aligned_cols=58 Identities=24% Similarity=0.441 Sum_probs=41.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||||++|+.+|..|++.|.+|+|+|+.+...+. ..-.+.....+.+++.|+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~ 228 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-YDSELTAPVAESLKKLGIA 228 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCE
Confidence 468999999999999999999999999999998775321 1111122234455555654
No 218
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.99 E-value=1e-05 Score=55.81 Aligned_cols=59 Identities=24% Similarity=0.334 Sum_probs=42.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+.+......-.+.....+.+++.|+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~ 203 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVD 203 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcE
Confidence 46899999999999999999999999999999876533221111222344556666653
No 219
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.98 E-value=1.5e-06 Score=61.51 Aligned_cols=36 Identities=33% Similarity=0.360 Sum_probs=29.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--------------ceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI--------------KPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~--------------~v~viE~~~~~ 40 (115)
-+||+|||+||+||++|..|.+.|. ....+|+.+..
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f 88 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQF 88 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSC
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCC
Confidence 3799999999999999999987543 46677876643
No 220
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.98 E-value=9.1e-06 Score=55.46 Aligned_cols=59 Identities=24% Similarity=0.262 Sum_probs=41.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+.+........+.....+.++..|+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~ 203 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVR 203 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCE
Confidence 56899999999999999999999999999998876533211111222334455555543
No 221
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.98 E-value=1.3e-05 Score=55.92 Aligned_cols=58 Identities=26% Similarity=0.337 Sum_probs=41.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+|+|+.+.+.+. ....+.....+.+++.|+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~ 227 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKKKGVE 227 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCE
Confidence 578999999999999999999999999999988765321 1111222234456666654
No 222
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.96 E-value=1.1e-05 Score=56.46 Aligned_cols=58 Identities=24% Similarity=0.337 Sum_probs=41.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
+.+++|||||+.|+.+|..|++.|.+|+|+|+.+..... ..-.+.....+.+++.|+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gV~ 226 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-GDPETAALLRRALEKEGIR 226 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhcCCE
Confidence 468999999999999999999999999999998765321 1111122234455666654
No 223
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=8.4e-06 Score=55.52 Aligned_cols=36 Identities=25% Similarity=0.401 Sum_probs=33.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
.+++|||||+.|+.+|..|++.|.+|+++|+.+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 179 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL 179 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec
Confidence 689999999999999999999999999999987654
No 224
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.95 E-value=1.5e-05 Score=55.59 Aligned_cols=36 Identities=33% Similarity=0.665 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|++|+.+|..|++.|.+|+++|+.+..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 468999999999999999999999999999988764
No 225
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.93 E-value=1.9e-05 Score=55.33 Aligned_cols=59 Identities=25% Similarity=0.406 Sum_probs=42.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
+.+++|||+|+.|+.+|..|++.|.+|+++|+.+........-.+.....+.+++.|+.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~ 236 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFK 236 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999876533121111222344556666654
No 226
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.92 E-value=1.5e-05 Score=56.14 Aligned_cols=59 Identities=20% Similarity=0.272 Sum_probs=42.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+........-.+.....+.+++.|+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~ 252 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQ 252 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeE
Confidence 56899999999999999999999999999999876533221111222334455555653
No 227
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.91 E-value=1.8e-05 Score=47.47 Aligned_cols=35 Identities=29% Similarity=0.334 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|+|+|+|..|..+|..|.+.|++|+++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998654
No 228
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.89 E-value=1.9e-05 Score=46.54 Aligned_cols=34 Identities=29% Similarity=0.448 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+++|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 5799999999999999999999999999998653
No 229
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.85 E-value=2.3e-05 Score=54.38 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=41.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+.+......-.+.....+.+++.|+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~ 207 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVD 207 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeE
Confidence 46899999999999999999999999999998876533221111222234455555653
No 230
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.84 E-value=2.5e-05 Score=51.61 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.+++|||||+.|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 58999999999999999999999999999988765
No 231
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.82 E-value=3.1e-05 Score=54.00 Aligned_cols=36 Identities=28% Similarity=0.440 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP 202 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch
Confidence 568999999999999999999999999999988764
No 232
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.82 E-value=2.9e-05 Score=44.00 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=32.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCC-CceEEEcCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLG-IKPLVLEKSD 38 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g-~~v~viE~~~ 38 (115)
.+..+|+|+|+|..|..++..|.+.| ++|.++++++
T Consensus 3 ~~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 3 AMRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TTCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 45568999999999999999999999 8999998864
No 233
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.82 E-value=4.7e-05 Score=45.53 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+.+++|+|+|..|..++..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4589999999999999999999999999999863
No 234
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.82 E-value=3.3e-05 Score=53.97 Aligned_cols=58 Identities=22% Similarity=0.339 Sum_probs=41.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+.+.+. ..-.+.....+.+++.|+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~ 228 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-EDADVSKEIEKQFKKLGVT 228 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHcCCE
Confidence 468999999999999999999999999999998765321 1111222234556666653
No 235
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.82 E-value=2.7e-05 Score=54.22 Aligned_cols=59 Identities=20% Similarity=0.196 Sum_probs=42.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|..|+.+|..|++.|.+|+++|+.+........-.+.....+.+++.|+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~ 207 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVN 207 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCE
Confidence 46899999999999999999999999999998876533222212223344556666654
No 236
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.81 E-value=3.5e-05 Score=45.12 Aligned_cols=33 Identities=27% Similarity=0.460 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+++|+|+|..|..++..|.+.|++|.++++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999998754
No 237
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.81 E-value=2.9e-05 Score=51.98 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+++|+|||+|..|..+|..|++.|++|+++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 4689999999999999999999999999998864
No 238
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.78 E-value=3.7e-05 Score=51.89 Aligned_cols=39 Identities=18% Similarity=0.306 Sum_probs=33.7
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDG 39 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~ 39 (115)
|.+.+.+|+|||+|..|..+|..|+..|+ +|.++|.++.
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 44455689999999999999999999998 9999998753
No 239
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.78 E-value=2.5e-05 Score=54.63 Aligned_cols=58 Identities=26% Similarity=0.353 Sum_probs=41.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+..... ..-.+.....+.+++.|+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~~gv~ 234 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEIRKQFQRSLEKQGMK 234 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-ccHHHHHHHHHHHHHcCCE
Confidence 568999999999999999999999999999998765321 1111222234556666654
No 240
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.76 E-value=4.4e-05 Score=44.50 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999764
No 241
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.74 E-value=5.6e-05 Score=52.92 Aligned_cols=36 Identities=39% Similarity=0.513 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|..|+.+|..|++.|.+|+++|+.+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 468999999999999999999999999999988764
No 242
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.74 E-value=4.7e-05 Score=51.86 Aligned_cols=38 Identities=37% Similarity=0.460 Sum_probs=32.6
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|++++++|.|||+|..|..+|..|++.|++|.++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 44445789999999999999999999999999999864
No 243
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.74 E-value=5e-05 Score=54.42 Aligned_cols=60 Identities=25% Similarity=0.255 Sum_probs=42.8
Q ss_pred CCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 2 ETVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 2 ~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
+..+.+++|||||..|+-+|..+++.|.+|+|+++....... --.+.....+.|++.|+.
T Consensus 220 ~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~--D~ei~~~l~~~l~~~gi~ 279 (542)
T 4b1b_A 220 KKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGF--DQQCAVKVKLYMEEQGVM 279 (542)
T ss_dssp SSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTS--CHHHHHHHHHHHHHTTCE
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccccc--chhHHHHHHHHHHhhcce
Confidence 345688999999999999999999999999999875443211 111223345566666653
No 244
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.74 E-value=6e-05 Score=52.71 Aligned_cols=57 Identities=25% Similarity=0.313 Sum_probs=42.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+.... ..-.+.....+.+++.|+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~Gv~ 232 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVTAAFRAEGIE 232 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHHHHHHhCCCE
Confidence 46899999999999999999999999999998876533 1112223344556666654
No 245
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.72 E-value=3.7e-05 Score=51.28 Aligned_cols=34 Identities=32% Similarity=0.429 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+++|.|||+|..|..+|..|++.|++|+++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 4689999999999999999999999999999864
No 246
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.72 E-value=2.7e-05 Score=53.64 Aligned_cols=36 Identities=31% Similarity=0.613 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 468999999999999999999999999999988765
No 247
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.71 E-value=5.6e-05 Score=52.06 Aligned_cols=59 Identities=27% Similarity=0.345 Sum_probs=42.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+......-.+.....+.+++.|+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~ 210 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVD 210 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCE
Confidence 46799999999999999999999999999999877543322222223334555666654
No 248
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.71 E-value=6.9e-05 Score=52.16 Aligned_cols=58 Identities=21% Similarity=0.347 Sum_probs=43.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||||+.|+.+|..+++.|.+|+|+|+.+..... ..-.+.....+.+++.|+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~~l~~~gV~ 204 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIP 204 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHHHHHHTTCC
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHHHhhccceE
Confidence 457999999999999999999999999999998765322 1222334456677777764
No 249
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.71 E-value=2.8e-05 Score=54.65 Aligned_cols=38 Identities=37% Similarity=0.537 Sum_probs=34.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
...+++|||+|+.|+.+|..|++.|.+|+++|+.+...
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 222 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG 222 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh
Confidence 35789999999999999999999999999999876643
No 250
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.70 E-value=5.8e-05 Score=51.86 Aligned_cols=59 Identities=24% Similarity=0.291 Sum_probs=42.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+........-.+.....+.+++.|+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~ 200 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIR 200 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcE
Confidence 35799999999999999999999999999998876543322222223334455666654
No 251
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.69 E-value=4.8e-05 Score=50.34 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+++|+|||+|..|..+|..|++.|++|+++++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 4689999999999999999999999999999874
No 252
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.68 E-value=5.2e-05 Score=49.90 Aligned_cols=36 Identities=31% Similarity=0.601 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|..|+.+|..|++.|.+|+|+++....
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 357999999999999999999999999999986553
No 253
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.68 E-value=7.4e-05 Score=52.50 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=41.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
...+++|||+|+.|+.+|..|++.|.+|+++|+.+.+... ..-.+.....+.|++.|+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~Gv~ 242 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNTITDHYVKEGIN 242 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHHTCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHHHHHHHHHHHHhCCeE
Confidence 3468999999999999999999999999999998765321 1111222234456666654
No 254
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.66 E-value=6.2e-05 Score=53.19 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=42.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+.+... ..-.+.....+.|++.|+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~gv~ 233 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESVINVLENDMKKNNIN 233 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-cchhhHHHHHHHHHhCCCE
Confidence 468999999999999999999999999999998765321 1111222344566666654
No 255
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.66 E-value=7.8e-05 Score=49.42 Aligned_cols=33 Identities=24% Similarity=0.497 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+|.|||+|..|...|..|++.|++|+++++++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 569999999999999999999999999999764
No 256
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.65 E-value=3.8e-05 Score=50.92 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=30.8
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHC-----C-CceEEEcC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRL-----G-IKPLVLEK 36 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~-----g-~~v~viE~ 36 (115)
|++++++|.|||+|..|..+|..|++. | ++|+++++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 566667899999999999999999998 9 99999987
No 257
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.65 E-value=5.6e-05 Score=50.81 Aligned_cols=39 Identities=23% Similarity=0.406 Sum_probs=31.2
Q ss_pred CCCcc-ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 1 METVE-KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 1 m~~~~-~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
|+.++ .+|.|||+|..|...|..++++|++|+++|+++.
T Consensus 1 m~~~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCCCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 44543 5799999999999999999999999999997653
No 258
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.63 E-value=0.0001 Score=51.71 Aligned_cols=59 Identities=25% Similarity=0.295 Sum_probs=42.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
...+++|||+|..|+.+|..|++.|.+|+++++.+.... ...-.+.....+.|++.|+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~~~~~l~~~gv~ 244 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNCTEELENAGVE 244 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHTTCE
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc-ccCHHHHHHHHHHHHHCCCE
Confidence 356899999999999999999999999999998776432 11111222344566666654
No 259
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.63 E-value=0.00011 Score=51.47 Aligned_cols=58 Identities=26% Similarity=0.275 Sum_probs=41.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHH-HHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLAL-DALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l-~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+..... ..-.+.....+.+ ++.|+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~~gv~ 232 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDVTNALVGALAKNEKMK 232 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHHHHHHHHHHhhcCCcE
Confidence 468999999999999999999999999999998765321 1111122234456 666654
No 260
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.62 E-value=8.4e-05 Score=53.04 Aligned_cols=58 Identities=29% Similarity=0.403 Sum_probs=41.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|..|+.+|..|++.|.+|+++++.+.... ...-.+.....+.+++.|+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~GV~ 208 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT-PVDREMAGFAHQAIRDQGVD 208 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT-TSCHHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch-hcCHHHHHHHHHHHHHCCCE
Confidence 35899999999999999999999999999998876432 11111222234456666653
No 261
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.60 E-value=7.5e-05 Score=52.05 Aligned_cols=58 Identities=21% Similarity=0.225 Sum_probs=41.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGV 62 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~ 62 (115)
..+++|||+|..|+.+|..|++.|.+|+++++.+........-.+.....+.+++.|+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV 204 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAV 204 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCC
Confidence 4679999999999999999999999999999887653322111222234445555554
No 262
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.60 E-value=0.00011 Score=45.06 Aligned_cols=35 Identities=26% Similarity=0.342 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHC-CCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRL-GIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~-g~~v~viE~~~~ 39 (115)
..+|+|+|+|..|..+|..|.+. |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 35899999999999999999999 999999998653
No 263
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.59 E-value=0.00011 Score=49.47 Aligned_cols=32 Identities=28% Similarity=0.323 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
++|.|||+|..|..+|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999999999999974
No 264
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.57 E-value=0.00011 Score=51.69 Aligned_cols=37 Identities=38% Similarity=0.554 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
..+++|||||+.|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l 221 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM 221 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc
Confidence 5689999999999999999999999999999987653
No 265
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.56 E-value=0.00014 Score=47.88 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.|||+|..|...|..+++.|++|+++++++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 5799999999999999999999999999997753
No 266
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.56 E-value=7.5e-05 Score=47.19 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 799999999999999999999999999997653
No 267
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.56 E-value=0.00017 Score=50.84 Aligned_cols=38 Identities=34% Similarity=0.586 Sum_probs=34.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
...+++|||+|+.|+.+|..|++.|.+|+++++.+...
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 210 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA 210 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc
Confidence 35789999999999999999999999999999987753
No 268
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.54 E-value=0.00018 Score=50.73 Aligned_cols=58 Identities=19% Similarity=0.263 Sum_probs=41.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..+++.|.+|+++|+.+..... ..-.+.....+.+++.|+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~ 239 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADAALVLEESFAERGVR 239 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCE
Confidence 468999999999999999999999999999988765321 1111222334556666654
No 269
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.54 E-value=0.00014 Score=50.87 Aligned_cols=59 Identities=31% Similarity=0.366 Sum_probs=41.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
...+++|||+|+.|+.+|..|++.|.+|+++++.+..... ..-.+.....+.++..|+.
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~ 237 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQVAKEAQKILTKQGLK 237 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-cCHHHHHHHHHHHHhCCCE
Confidence 3568999999999999999999999999999998765321 1111222234455665643
No 270
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.53 E-value=0.00012 Score=51.36 Aligned_cols=33 Identities=24% Similarity=0.526 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
++|.|||+|..|+.+|..|++.|++|+++++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999865
No 271
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.52 E-value=0.00012 Score=48.68 Aligned_cols=33 Identities=30% Similarity=0.358 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+++|+|||+|..|..+|..|+ .|++|+++.+++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 468999999999999999999 999999998764
No 272
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.51 E-value=0.00021 Score=51.53 Aligned_cols=33 Identities=30% Similarity=0.329 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
..+++|||||..|+.+|..|++.|.+|+++++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 457999999999999999999999999999987
No 273
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.51 E-value=0.00016 Score=50.93 Aligned_cols=58 Identities=26% Similarity=0.371 Sum_probs=41.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.|.+|+++|+.+..... ..-.+.....+.+++.|+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~gV~ 255 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQRMLTKQGID 255 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHHHHHhCCCE
Confidence 568999999999999999999999999999988765321 1111222234455555653
No 274
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.51 E-value=0.00014 Score=48.83 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=31.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|+++|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 57899999999999999999999999999998753
No 275
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.50 E-value=0.00014 Score=48.00 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
++|.|||+|..|..+|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999998754
No 276
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.48 E-value=0.00024 Score=49.99 Aligned_cols=58 Identities=21% Similarity=0.282 Sum_probs=40.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
.+.+++|||+|..|+.+|..|++.|.+|+++++..... ...-.+.....+.|++.|+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~--~~d~~~~~~l~~~l~~~gv~ 241 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR--GFDQQMSSLVTEHMESHGTQ 241 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST--TSCHHHHHHHHHHHHHTTCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc--cCCHHHHHHHHHHHHHCCCE
Confidence 35689999999999999999999999999999864321 11111222334556666654
No 277
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.48 E-value=0.00017 Score=48.19 Aligned_cols=35 Identities=17% Similarity=0.442 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~ 39 (115)
..+|.|||+|..|..+|..|++.|+ +|.++|.++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 4689999999999999999999998 9999998653
No 278
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.48 E-value=0.00017 Score=48.09 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI--KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~ 38 (115)
.++|+|||+|..|..+|..|++.|+ +|+++++++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999998763
No 279
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.48 E-value=0.00015 Score=50.74 Aligned_cols=59 Identities=25% Similarity=0.347 Sum_probs=42.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHC-CCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRL-GIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~-g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++. |.+|+++++.+........-.+.....+.+++.|+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~ 218 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVV 218 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCE
Confidence 46899999999999999999999 999999998876533121112222334456666653
No 280
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.47 E-value=0.00018 Score=51.75 Aligned_cols=58 Identities=17% Similarity=0.296 Sum_probs=41.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|..|+.+|..|++.|.+|+++++.+..... ....+.....+.+++.|+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~ 244 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVE 244 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHHHHHHHcCCE
Confidence 468999999999999999999999999999987764322 1111222334556666653
No 281
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.47 E-value=0.00025 Score=50.39 Aligned_cols=58 Identities=22% Similarity=0.292 Sum_probs=40.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
.+.+++|||+|..|+.+|..|++.|.+|+++++..... ...-.+.....+.|++.|+.
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~--~~d~~~~~~~~~~l~~~GV~ 266 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR--GFDQDMANKIGEHMEEHGIK 266 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST--TSCHHHHHHHHHHHHHTTCE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc--cCCHHHHHHHHHHHHHCCCE
Confidence 35679999999999999999999999999999853221 11111222234456666654
No 282
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.47 E-value=0.00018 Score=47.77 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=31.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+..+|.|||.|..|..+|..|++.|++|+++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45689999999999999999999999999999765
No 283
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.47 E-value=4.9e-05 Score=53.48 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.++|+|+|+|-.|..+|..|...|++|+++|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45899999999999999999999999999998764
No 284
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.46 E-value=0.00019 Score=48.14 Aligned_cols=35 Identities=23% Similarity=0.389 Sum_probs=30.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGI--KPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~ 38 (115)
.+.+|+|||+|.+|+++|..|+..+. ++.++|.++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 45799999999999999999999987 899999764
No 285
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.45 E-value=0.00021 Score=50.51 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=41.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHC---CCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRL---GIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~---g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|..|+.+|..|++. |.+|+++|+.+.+... ..-.+.....+.|++.|+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~ 251 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-FDETIREEVTKQLTANGIE 251 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-SCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhCCCE
Confidence 46899999999999999999999 9999999998765321 1111122234556666653
No 286
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.45 E-value=0.00021 Score=47.91 Aligned_cols=37 Identities=30% Similarity=0.492 Sum_probs=32.4
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGI-KPLVLEKS 37 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~ 37 (115)
|+....+|.|||+|..|..+|..|+..|+ ++.++|.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 43345689999999999999999999999 99999986
No 287
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.45 E-value=8.8e-05 Score=49.68 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=32.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCC-CceEEEcCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLG-IKPLVLEKSD 38 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g-~~v~viE~~~ 38 (115)
+|..+|.|||.|..|..+|..|++.| ++|.++++++
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred ccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 35578999999999999999999999 9999999875
No 288
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=97.44 E-value=0.00022 Score=46.56 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+|.|||+|..|..+|..|++.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998764
No 289
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.44 E-value=0.00019 Score=50.61 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=33.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHC---CCceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRL---GIKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~---g~~v~viE~~~~~~ 41 (115)
..+++|||+|+.|+.+|..|++. |.+|+++|+.+...
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 46899999999999999999999 99999999987643
No 290
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.43 E-value=0.00015 Score=48.03 Aligned_cols=36 Identities=17% Similarity=0.061 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
+.+|.|||.|..|...|..|++.|++|+++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 468999999999999999999999999999987653
No 291
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.42 E-value=0.0003 Score=50.02 Aligned_cols=57 Identities=12% Similarity=0.207 Sum_probs=40.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
.+++|||+|..|+.+|..|++.|.+|+++|+.+..... ..-.+.....+.+++.|+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~ 271 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLDRMKEQGME 271 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHHHHHHTTCE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHHHHHhCCcE
Confidence 78999999999999999999999999999998765322 1111122234455666653
No 292
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.42 E-value=0.00026 Score=47.70 Aligned_cols=35 Identities=31% Similarity=0.500 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~ 39 (115)
+.+|.|||+|..|..+|..|+..|+ +|.++|.++.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 4589999999999999999999998 9999998754
No 293
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.40 E-value=0.00016 Score=50.28 Aligned_cols=36 Identities=28% Similarity=0.461 Sum_probs=33.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
.+++|||+|..|+.+|..|++.|.+|+++++.+...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 184 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVL 184 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 589999999999999999999999999999887653
No 294
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.40 E-value=0.0003 Score=46.18 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=32.3
Q ss_pred CCccccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 2 ETVEKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 2 ~~~~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+.|..+|.|||+ |..|..+|..|.+.|++|.++++++
T Consensus 8 ~~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 8 DVGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp SCCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 334468999999 9999999999999999999999764
No 295
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.38 E-value=0.00022 Score=47.89 Aligned_cols=35 Identities=26% Similarity=0.429 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.+|+|||+|.+|+.+|..|++.|.+|+++++.+..
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 47999999999999999999999999999987654
No 296
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.37 E-value=0.00042 Score=48.48 Aligned_cols=36 Identities=36% Similarity=0.607 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|+.|+.+|..|++.|.+|+++++.+..
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 468999999999999999999999999999988765
No 297
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=97.37 E-value=0.00027 Score=47.62 Aligned_cols=33 Identities=27% Similarity=0.286 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
++|.|||+|..|...|..|++.|++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998764
No 298
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.36 E-value=0.00022 Score=47.97 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=30.8
Q ss_pred CCCc-cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 1 METV-EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 1 m~~~-~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|++. ..+|.|||+|..|...|..++.+|++|+++|.++
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4443 3579999999999999999999999999999764
No 299
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.36 E-value=0.00028 Score=46.36 Aligned_cols=36 Identities=25% Similarity=0.526 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|+.|+.+|..|++.|.+|+++++.+..
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGF 178 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence 368999999999999999999999999999987654
No 300
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=97.35 E-value=0.00036 Score=43.94 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|.|||+|..|..+|..|++.|++|.++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999998764
No 301
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.35 E-value=0.00025 Score=49.67 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..+|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3689999999999999999999999999999854
No 302
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=97.35 E-value=0.00027 Score=49.94 Aligned_cols=34 Identities=29% Similarity=0.530 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.++|.|||.|..|+.+|..|++.|++|+++++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3589999999999999999999999999999764
No 303
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.33 E-value=0.00035 Score=50.07 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+|+|||+|++|+-+|..|++.+.+|+++++.+..
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 468999999999999999999999999999998763
No 304
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.32 E-value=0.00031 Score=46.09 Aligned_cols=36 Identities=28% Similarity=0.409 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|++|+.+|..|++.+.+|+++++.+..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 357999999999999999999999999999988765
No 305
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=97.31 E-value=0.00038 Score=49.25 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 45899999999999999999999999999997653
No 306
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.31 E-value=0.00034 Score=47.18 Aligned_cols=37 Identities=35% Similarity=0.543 Sum_probs=31.9
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGI--KPLVLEKS 37 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~ 37 (115)
|+....+|+|||+|..|.++|..|+..|+ ++.++|.+
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 55666789999999999999999999987 89999864
No 307
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.30 E-value=0.00049 Score=48.10 Aligned_cols=58 Identities=16% Similarity=0.308 Sum_probs=41.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..+++.|.+|+++++.+..... ..-.+.....+.++..|+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~ 227 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQDMRRGLHAAMEEKGIR 227 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCE
Confidence 568999999999999999999999999999988764321 1111222234455666653
No 308
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.29 E-value=0.00031 Score=48.77 Aligned_cols=36 Identities=31% Similarity=0.350 Sum_probs=32.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+.+|+|+|.|..|..+|..|.+.|++|+++|+++.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 346799999999999999999999999999998754
No 309
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.28 E-value=0.00054 Score=45.56 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|.|||+|..|...|..|.+.|++|.++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998654
No 310
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.28 E-value=0.00035 Score=50.00 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|+|||+|.+|+-+|..|++.+.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999876
No 311
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.28 E-value=0.00051 Score=48.25 Aligned_cols=34 Identities=38% Similarity=0.548 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+.+++|||+|..|+.+|..|++.|.+|+++++..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 4679999999999999999999999999999853
No 312
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.27 E-value=0.00046 Score=46.10 Aligned_cols=33 Identities=33% Similarity=0.463 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
.+|+|||+|..|..+|..++..|+ ++.++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999996 999999764
No 313
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.26 E-value=0.00037 Score=46.21 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+|+|||+|..|+.+|..|++.|.+|+++++.+..
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 358999999999999999999999999999988664
No 314
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=97.26 E-value=0.00031 Score=48.97 Aligned_cols=36 Identities=33% Similarity=0.505 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.++|.|||.|.+|+.+|..|+++|++|+++|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 467999999999999999999999999999976543
No 315
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.26 E-value=0.00042 Score=45.01 Aligned_cols=50 Identities=20% Similarity=0.206 Sum_probs=40.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|++|+.+|..|++.| +|+++++.+. .+.....+.++..|+.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~--------~~~~~~~~~l~~~gv~ 190 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV--------EPDADQHALLAARGVR 190 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC--------CCCHHHHHHHHHTTCE
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC--------CCCHHHHHHHHHCCcE
Confidence 467999999999999999999999 9999987654 2344556777777764
No 316
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.26 E-value=0.00058 Score=43.69 Aligned_cols=33 Identities=15% Similarity=0.287 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
...|+|||||.+|...+..|.+.|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 468999999999999999999999999999754
No 317
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.25 E-value=0.0009 Score=44.91 Aligned_cols=35 Identities=23% Similarity=0.127 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHH-HHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLA-TALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~-~A~~l~~~g~~v~viE~~~~ 39 (115)
.++|.|||.|.+|++ +|..|.++|++|.+.|+++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 367999999999996 89999999999999998654
No 318
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.24 E-value=0.00041 Score=45.96 Aligned_cols=35 Identities=31% Similarity=0.509 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.+++|||+|++|+.+|..|++.|.+|+++++.+..
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTL 187 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcC
Confidence 57999999999999999999999999999987654
No 319
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.24 E-value=0.00037 Score=49.23 Aligned_cols=59 Identities=29% Similarity=0.305 Sum_probs=38.5
Q ss_pred cccEEEECCCHHHHHHHHHHHH----CCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKR----LGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~----~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||||+.|+.+|..|++ .|.+|+++++.+........-.+.....+.+++.|+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~ 242 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVK 242 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCE
Confidence 4689999999999999999887 4789999987654322211111222234455555653
No 320
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.23 E-value=0.0006 Score=45.83 Aligned_cols=35 Identities=14% Similarity=0.380 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~ 39 (115)
..+|+|||+|..|..+|..|+..|+ +|.++|.++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 3589999999999999999999998 9999997643
No 321
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.22 E-value=0.0004 Score=48.66 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 467999999999999999999999999999987654
No 322
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.22 E-value=0.00045 Score=45.48 Aligned_cols=36 Identities=25% Similarity=0.516 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|++|+.+|..|++.|.+|+++++.+..
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 357999999999999999999999999999987654
No 323
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.22 E-value=0.00052 Score=48.13 Aligned_cols=36 Identities=19% Similarity=0.439 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
...+.|||.|..|+.+|..|++.|++|+++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 367999999999999999999999999999987753
No 324
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.22 E-value=0.00046 Score=49.50 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|+|||+|.+|+-+|..|++.+.+|+++++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999876
No 325
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.21 E-value=0.00047 Score=45.94 Aligned_cols=36 Identities=22% Similarity=0.469 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|+.|+.+|..|++.|.+|+++++.+..
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 368999999999999999999999999999987654
No 326
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.21 E-value=0.00057 Score=45.51 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999998764
No 327
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.20 E-value=0.00066 Score=45.42 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI--KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~ 38 (115)
..+|.|||.|..|..+|..|.+.|+ +|.++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 999999765
No 328
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.20 E-value=0.0009 Score=44.22 Aligned_cols=36 Identities=31% Similarity=0.460 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|++|+.+|..|++.|.+|+++++.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 357999999999999999999999999999987765
No 329
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.19 E-value=0.00054 Score=47.62 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCc-eEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIK-PLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~-v~viE~~~~~ 40 (115)
..+|+|||+|.+|+-+|..|++.+.+ |+++++.+..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 35799999999999999999999998 9999987643
No 330
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.19 E-value=0.00051 Score=45.92 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..+|.|||+|..|..+|..|++.|++|+++ +.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 543
No 331
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.17 E-value=0.00047 Score=48.75 Aligned_cols=34 Identities=21% Similarity=0.418 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHC-CC-ceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRL-GI-KPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~-g~-~v~viE~~~~ 39 (115)
++|.|||.|..|+.+|..|++. |+ +|+++++++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5899999999999999999999 99 9999998876
No 332
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.17 E-value=0.0014 Score=42.24 Aligned_cols=35 Identities=17% Similarity=0.118 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC----CceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLG----IKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g----~~v~viE~~~~~ 40 (115)
++|.|||+|..|...|..|.+.| ++|.++++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 47999999999999999999999 799999987653
No 333
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=97.17 E-value=0.00043 Score=45.99 Aligned_cols=34 Identities=26% Similarity=0.413 Sum_probs=30.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+++|.|||+|..|...|..|+ +|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3578999999999999999999 999999999865
No 334
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.17 E-value=0.00031 Score=47.67 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+|.|||+|..|..+|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999998764
No 335
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.16 E-value=0.00065 Score=43.73 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=32.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
...+|.|||+|..|..+|..|.+.|++|+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 356899999999999999999999999999997654
No 336
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=97.16 E-value=0.00041 Score=45.67 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=30.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|+++|.|||+|..|...|..|.+.|++|.++++++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45689999999999999999999999999998764
No 337
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.15 E-value=0.00061 Score=44.73 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998764
No 338
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.14 E-value=0.00065 Score=45.23 Aligned_cols=32 Identities=25% Similarity=0.520 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGI--KPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~ 38 (115)
+|+|||+|..|..+|..|+..|+ +|.++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999998 899998764
No 339
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.14 E-value=0.00082 Score=47.23 Aligned_cols=36 Identities=33% Similarity=0.588 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|+.|+.+|..+++.|.+|+++++.+..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 568999999999999999999999999999987754
No 340
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.14 E-value=0.00078 Score=46.68 Aligned_cols=35 Identities=26% Similarity=0.471 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|+|+|+|.+|+.+|..+...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998764
No 341
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.13 E-value=0.00049 Score=45.67 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|..|+.+|..|++.|.+|+++++.+..
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF 187 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc
Confidence 358999999999999999999999999999987764
No 342
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.11 E-value=0.001 Score=44.15 Aligned_cols=35 Identities=34% Similarity=0.488 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|.|||.|..|..+|..|.+.|++|+++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 343
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.10 E-value=0.00061 Score=46.45 Aligned_cols=35 Identities=11% Similarity=0.053 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCC-------CceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLG-------IKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g-------~~v~viE~~~~ 39 (115)
..+|.|||+|..|..+|..|++.| ++|+++++++.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 357999999999999999999999 99999998755
No 344
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.09 E-value=0.00062 Score=44.94 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.+++|||+|+.|+.+|..|++.|.+|+++++.+..
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY 190 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc
Confidence 57999999999999999999999999999987654
No 345
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=97.09 E-value=0.00062 Score=45.40 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~ 37 (115)
..+|.|||.|..|..+|..|.+.|+ +|.+++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3589999999999999999999999 99999986
No 346
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.08 E-value=0.00043 Score=43.88 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEE-EcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLV-LEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~v-iE~~~~ 39 (115)
++|.|||+|..|..+|..|.+.|++|.+ +++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 5899999999999999999999999998 787654
No 347
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.08 E-value=0.00054 Score=47.90 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
++|.|||.|..|+.+|..|++ |++|+++++++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 589999999999999999998 999999997654
No 348
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.08 E-value=0.0012 Score=43.77 Aligned_cols=34 Identities=29% Similarity=0.366 Sum_probs=31.1
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIG-AGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG-~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.||| +|..|..+|..|++.|++|.++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 5799999 999999999999999999999997653
No 349
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=97.08 E-value=0.0011 Score=42.67 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC----ceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI----KPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~----~v~viE~~~~ 39 (115)
.++|.|||+|..|...|..|.+.|+ +|.++++++.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 3589999999999999999999998 9999998753
No 350
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=97.07 E-value=0.0011 Score=44.78 Aligned_cols=35 Identities=23% Similarity=0.511 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
++|+|+|||..|..+++.+++.|++|.++|.++..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 67999999999999999999999999999977653
No 351
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=97.07 E-value=0.00042 Score=45.64 Aligned_cols=33 Identities=27% Similarity=0.476 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
...|+|||||.+|+..+..|.+.|++|+|++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 468999999999999999999999999999854
No 352
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.06 E-value=0.00057 Score=47.90 Aligned_cols=34 Identities=18% Similarity=0.369 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..+|.|||.|-+||.+|..+++.|++|+.+|-++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3689999999999999999999999999998664
No 353
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.06 E-value=0.0011 Score=41.79 Aligned_cols=34 Identities=26% Similarity=0.254 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..+|.|||+|..|...|..|.+.|++|.++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999764
No 354
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=97.06 E-value=0.00097 Score=46.95 Aligned_cols=34 Identities=29% Similarity=0.546 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.|||+|..|...|..+++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999998654
No 355
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.0011 Score=47.11 Aligned_cols=36 Identities=17% Similarity=0.292 Sum_probs=32.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
|..+|.|||.|..|..+|..|+++|++|.++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 467899999999999999999999999999998753
No 356
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=97.05 E-value=0.00091 Score=47.06 Aligned_cols=33 Identities=27% Similarity=0.527 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999764
No 357
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.05 E-value=0.00054 Score=47.63 Aligned_cols=36 Identities=17% Similarity=0.343 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRL--GIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~~ 40 (115)
..+|+|||+|.+|+-+|..|++. +.+|+++++.+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 46899999999999999999998 8999999988754
No 358
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.05 E-value=0.00047 Score=48.90 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=42.6
Q ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCChHHH
Q 047339 7 DVVIIGAGIAGLATALALKRL--------------GIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVSHKL 66 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~--------------g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~i 66 (115)
.++|||||++|+.+|..|+.. ..+|+|+|..+...+ ...-.+.....+.|++.|+.-..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~-~~~~~~~~~~~~~L~~~GV~v~~ 291 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN-MFEKKLSSYAQSHLENTSIKVHL 291 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEEET
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc-CCCHHHHHHHHHHHHhcceeeec
Confidence 699999999999999988753 368999999887543 22223444466788888876433
No 359
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.04 E-value=0.001 Score=44.43 Aligned_cols=33 Identities=30% Similarity=0.523 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHC--CCceEEEcCCCC
Q 047339 7 DVVIIGAGIAGLATALALKRL--GIKPLVLEKSDG 39 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~~ 39 (115)
+|+|||+|..|..+|..|++. +++|.++|.++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 799999999999999999985 789999998753
No 360
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.03 E-value=0.0012 Score=44.54 Aligned_cols=35 Identities=17% Similarity=0.375 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~ 39 (115)
..+|.|||+|..|..+|..|+..|+ ++.++|.++.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 3589999999999999999999998 9999997654
No 361
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.03 E-value=0.00048 Score=45.77 Aligned_cols=37 Identities=19% Similarity=0.348 Sum_probs=29.5
Q ss_pred CccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 3 TVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 3 ~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.|..+|.+||-|..|..+|..|.++|++|+++++++.
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4666899999999999999999999999999998664
No 362
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=97.03 E-value=0.00061 Score=47.49 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+|.|||+|..|+.+|..|++.|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999764
No 363
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.02 E-value=0.00072 Score=45.10 Aligned_cols=30 Identities=30% Similarity=0.335 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEK 36 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~ 36 (115)
+|.|||+|..|..+|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 364
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.02 E-value=0.00051 Score=47.23 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=28.1
Q ss_pred ccEEEECCCHHHHHHHHHHHH-CCCceEEEc
Q 047339 6 KDVVIIGAGIAGLATALALKR-LGIKPLVLE 35 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~-~g~~v~viE 35 (115)
++|.|||+|..|..+|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 579999999999999999988 599999998
No 365
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.99 E-value=0.00066 Score=47.74 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRL--GIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~ 38 (115)
++|.|||.|..|+.+|..|++. |++|+++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999998 89999999764
No 366
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.99 E-value=0.0014 Score=44.00 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~ 39 (115)
.+|.|||+|..|.++|..|+..++ ++.++|.++.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 589999999999999999999988 8999997653
No 367
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.98 E-value=0.00082 Score=45.15 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|++|+.+|..|++.|.+|+++++.+..
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF 198 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCC
Confidence 357999999999999999999999999999987654
No 368
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.97 E-value=0.0007 Score=44.46 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.|||.|..|..+|..|.+.|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998765
No 369
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.96 E-value=0.0015 Score=45.84 Aligned_cols=36 Identities=25% Similarity=0.318 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCc-eEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIK-PLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~-v~viE~~~~~ 40 (115)
..+|+|||||.+|+-+|..+.+.|.+ |+++++.+..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 35799999999999999999999985 9999987653
No 370
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.96 E-value=0.00094 Score=45.92 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|+|+|+|.+|+.+|..+...|.+|+++|+++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 371
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=96.96 E-value=0.0002 Score=46.05 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=32.8
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
|.....+|.|||.|..|..+|..|+++|++|..+++...
T Consensus 2 ~~~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~~ 40 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPED 40 (232)
T ss_dssp -CCCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGGG
T ss_pred CCCCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHHH
Confidence 334456899999999999999999999999999987543
No 372
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.95 E-value=0.00094 Score=47.50 Aligned_cols=36 Identities=28% Similarity=0.409 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 390 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc
Confidence 357999999999999999999999999999987665
No 373
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.95 E-value=0.0013 Score=43.99 Aligned_cols=37 Identities=32% Similarity=0.550 Sum_probs=30.9
Q ss_pred CCC-ccccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCC
Q 047339 1 MET-VEKDVVIIGAGIAGLATALALKRLGI--KPLVLEKS 37 (115)
Q Consensus 1 m~~-~~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~ 37 (115)
|+. +..+|+|||+|..|.++|+.|+..+. ++.++|.+
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 554 34689999999999999999998875 78888865
No 374
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.92 E-value=0.0011 Score=42.99 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=31.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|.++|+|.|+|..|..++..|.++|++|.++.+++
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 45689999999999999999999999999998765
No 375
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.92 E-value=0.0015 Score=42.79 Aligned_cols=37 Identities=24% Similarity=0.410 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLR 41 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~ 41 (115)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+...
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~ 190 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK 190 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC
Confidence 3679999999999999999999999999999887653
No 376
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.92 E-value=0.0012 Score=44.24 Aligned_cols=34 Identities=26% Similarity=0.461 Sum_probs=29.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGI--KPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~ 37 (115)
.+.+|+|||+|.+|.++|..|+..+. .+.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34699999999999999999999885 78888864
No 377
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.92 E-value=0.0017 Score=45.96 Aligned_cols=35 Identities=17% Similarity=0.376 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+.+|.|||.|..|..+|..|++.|++|.++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999998763
No 378
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.91 E-value=0.001 Score=43.80 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+.+|.|||+|..|...|..|.+.|++|.++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998764
No 379
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.91 E-value=0.0021 Score=41.84 Aligned_cols=34 Identities=29% Similarity=0.348 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
++|+|.|+|..|..++..|.++|++|.++.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4799999999999999999999999999988643
No 380
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.91 E-value=0.0011 Score=43.01 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
..+|+|||+|-.|..+|..|++.|+ +++|+|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3589999999999999999999998 788999765
No 381
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.91 E-value=0.0014 Score=46.30 Aligned_cols=35 Identities=17% Similarity=0.388 Sum_probs=31.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+.+|.|||.|..|..+|..|+++|++|.++++++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35689999999999999999999999999999864
No 382
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.90 E-value=0.0011 Score=44.37 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.|||.|..|..+|..|++.|++|.++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4899999999999999999999999999998753
No 383
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.89 E-value=0.0011 Score=48.75 Aligned_cols=58 Identities=17% Similarity=0.044 Sum_probs=41.7
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 6 KDVVIIG--AGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 6 ~~v~IvG--~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
.+|+||| +|.+|+.+|..|++.|.+|+++++.+................+.+++.|+.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~ 583 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVA 583 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCE
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCE
Confidence 4699999 999999999999999999999998776533221111223345566666654
No 384
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.88 E-value=0.00045 Score=40.81 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+++|||+|..|...+..|.+.|++|.++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 35799999999999999999999999999987643
No 385
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=96.88 E-value=0.0011 Score=45.88 Aligned_cols=31 Identities=16% Similarity=0.325 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+|.|||+|..|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999764
No 386
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.87 E-value=0.0017 Score=43.50 Aligned_cols=34 Identities=26% Similarity=0.241 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC----CceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLG----IKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g----~~v~viE~~~~ 39 (115)
++|.|||+|..|..+|..|.+.| ++|.++++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 57999999999999999999999 89999998753
No 387
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=96.87 E-value=0.001 Score=47.07 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRL--GIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~ 38 (115)
++|.|||.|..|+.+|..|++. |++|+++++++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 79999999754
No 388
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.86 E-value=0.00077 Score=45.43 Aligned_cols=34 Identities=24% Similarity=0.206 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC-------CceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLG-------IKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g-------~~v~viE~~~~ 39 (115)
++|.|||+|..|..+|..|++.| ++|.++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999998654
No 389
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.86 E-value=0.0015 Score=42.65 Aligned_cols=36 Identities=28% Similarity=0.484 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+++|||+|+.|+.+|..|.+.+.+|+++++.+..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 357999999999999999999999999999987664
No 390
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.86 E-value=0.0013 Score=43.98 Aligned_cols=32 Identities=28% Similarity=0.469 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGI--KPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~ 38 (115)
+|.|||+|..|..+|..|++.|+ +|.++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999998 999998763
No 391
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=96.85 E-value=0.002 Score=45.51 Aligned_cols=33 Identities=18% Similarity=0.377 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+|.|||.|..|..+|..|++.|++|.++++++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999865
No 392
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.84 E-value=0.0018 Score=44.21 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
++|.|||.|..|..+|..|.+.|++|.++++++
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999865
No 393
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.83 E-value=0.00057 Score=43.52 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+.+++|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 5689999999999999999999999 999998753
No 394
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.82 E-value=0.0007 Score=50.07 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=31.1
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIG--AGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG--~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+|+||| ||..|+.+|..|++.|.+|+++++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 5799998 99999999999999999999999887
No 395
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.82 E-value=0.0012 Score=43.51 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999865
No 396
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.82 E-value=0.0019 Score=42.08 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+|.|||+|..|...|..|.+.|++|.++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998764
No 397
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=96.81 E-value=0.0025 Score=41.84 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC---ceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGI---KPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~---~v~viE~~~~ 39 (115)
.+|.|||+|..|...|..|.+.|+ +|.++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 579999999999999999999998 9999998753
No 398
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.81 E-value=0.0024 Score=45.02 Aligned_cols=34 Identities=15% Similarity=0.355 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+.+|.|||.|..|..+|..|++.|++|.++++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3589999999999999999999999999999864
No 399
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.79 E-value=0.0023 Score=43.91 Aligned_cols=35 Identities=29% Similarity=0.497 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|+|+|+|.+|+.++..+...|.+|+++++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 400
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=96.79 E-value=0.0017 Score=41.86 Aligned_cols=32 Identities=22% Similarity=0.352 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCC-CceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLG-IKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g-~~v~viE~~~ 38 (115)
+|.|||+|..|...|..|.+.| ++|.++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999998764
No 401
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=96.78 E-value=0.0018 Score=42.55 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+|.|||+|..|...|..|.+.|++|.++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999999999999999999999999998653
No 402
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=96.77 E-value=0.0013 Score=44.23 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=30.5
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHHCCC-------ceEEEcCC
Q 047339 1 METVEKDVVIIGA-GIAGLATALALKRLGI-------KPLVLEKS 37 (115)
Q Consensus 1 m~~~~~~v~IvG~-G~~Gl~~A~~l~~~g~-------~v~viE~~ 37 (115)
|+..+.+|+|+|+ |..|..++..|...++ .+.++|..
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 5455679999998 9999999999998885 78888876
No 403
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.0015 Score=40.98 Aligned_cols=38 Identities=32% Similarity=0.422 Sum_probs=31.5
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 1 METVEKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 1 m~~~~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
|+.| ++|+|.|| |..|..++..|.++|++|.++.|++.
T Consensus 1 M~~m-~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 1 MEKV-KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp --CC-CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 5544 57999995 99999999999999999999998754
No 404
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.76 E-value=0.0029 Score=42.86 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..+|.|||.|..|..+|..|.+.|++|.++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 405
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.75 E-value=0.0021 Score=44.42 Aligned_cols=35 Identities=34% Similarity=0.476 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|+|+|+|.+|+.++..+...|.+|+++++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46799999999999999999999999999997654
No 406
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=96.75 E-value=0.0018 Score=43.08 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC--CceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLG--IKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g--~~v~viE~~~ 38 (115)
++|+|||+|..|..+|..|++.| .+|.++++++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 6899998764
No 407
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.74 E-value=0.0019 Score=42.95 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGI--KPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~ 38 (115)
+|+|||+|..|.++|..|+..++ ++.++|.++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 79999999999999999999998 899998754
No 408
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=96.74 E-value=0.0023 Score=39.98 Aligned_cols=32 Identities=31% Similarity=0.467 Sum_probs=29.7
Q ss_pred cEEEEC-CCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 7 DVVIIG-AGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG-~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+|+|+| +|..|...|..|.+.|++|.++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999998764
No 409
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.74 E-value=0.0014 Score=49.92 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=39.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
.+++|||+|+.|+.+|..|++.|.+|+|+|+.+.... . .+.++..|+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~---------~-~~~l~~~GV~ 332 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA---------A-AAQAVADGVQ 332 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH---------H-HHHHHHTTCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch---------h-HHHHHhCCeE
Confidence 5799999999999999999999999999998876521 1 4566666654
No 410
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.73 E-value=0.0025 Score=41.21 Aligned_cols=34 Identities=32% Similarity=0.483 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCc-eEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIK-PLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~-v~viE~~~ 38 (115)
..+|.|||+|..|...|..|.+.|++ |.++++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999999 88998764
No 411
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.69 E-value=0.0023 Score=44.88 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHH--------------------HCCC-ceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALK--------------------RLGI-KPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~--------------------~~g~-~v~viE~~~~ 39 (115)
..+++|||+|.+|+-+|..|+ +.|. +|+|+++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 368999999999999999999 5687 6999998754
No 412
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.69 E-value=0.0024 Score=47.38 Aligned_cols=33 Identities=33% Similarity=0.423 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+|.|||+|..|...|..++++|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999764
No 413
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.68 E-value=0.0025 Score=43.35 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+|+|+|+|.+|+.++..++..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 679999999999999999999999999998764
No 414
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.68 E-value=0.0031 Score=45.17 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=32.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
.+++|+|+|..|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 68999999999999999999999999999988764
No 415
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.67 E-value=0.0025 Score=42.71 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGI--KPLVLEKSDG 39 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~~ 39 (115)
+|.|||+|..|..+|..|++.++ ++.++|.++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 79999999999999999999887 8999997653
No 416
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=96.67 E-value=0.0034 Score=42.76 Aligned_cols=39 Identities=21% Similarity=0.511 Sum_probs=33.7
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
|+.+.++|+|+|+|..|...+..+.+.|++|.+++..+.
T Consensus 7 m~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 7 LRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp TSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 455668999999999999999999999999999986543
No 417
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.67 E-value=0.0024 Score=42.08 Aligned_cols=52 Identities=23% Similarity=0.342 Sum_probs=39.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCCCCcceeeeeCccHHHHHHHcCCh
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGLRGTGAAINFAPNAWLALDALGVS 63 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 63 (115)
..+++|||+|+.|+.+|..|++.+.+|+++++.+..... ....+.|+..|+.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~-------~~~~~~l~~~gv~ 205 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH-------EHSVENLHASKVN 205 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC-------HHHHHHHHHSSCE
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc-------HHHHHHHhcCCeE
Confidence 357999999999999999999999999999987664221 2234456666654
No 418
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.65 E-value=0.0014 Score=45.87 Aligned_cols=34 Identities=21% Similarity=0.495 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
-+..|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4688999999999999999999999999998754
No 419
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.65 E-value=0.0029 Score=41.25 Aligned_cols=33 Identities=30% Similarity=0.477 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGI--KPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~ 38 (115)
.+|.|||+|..|...|..|.+.|+ +|.++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 469999999999999999999998 899998754
No 420
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=96.64 E-value=0.0034 Score=44.37 Aligned_cols=32 Identities=31% Similarity=0.537 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+|.|||+|..|..+|..|++.|++|.++++++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 79999999999999999999999999999764
No 421
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=96.63 E-value=0.0022 Score=41.85 Aligned_cols=33 Identities=30% Similarity=0.390 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.|||+|..|...|..|.+ |++|.++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 379999999999999999999 999999997653
No 422
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.63 E-value=0.0026 Score=42.44 Aligned_cols=34 Identities=32% Similarity=0.683 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGI--KPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~~ 39 (115)
.+|.|||+|..|...|+.+...|+ ++.++|.++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 689999999999999999999998 8999997653
No 423
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.60 E-value=0.0033 Score=42.92 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
...|+|+|+|..|+.+|..++..|.+|+++++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999999764
No 424
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=96.59 E-value=0.0046 Score=41.69 Aligned_cols=34 Identities=41% Similarity=0.443 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.|||+|..|...|..|++.|++|.++++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 4799999999999999999999999999987653
No 425
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.58 E-value=0.0042 Score=38.13 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.7
Q ss_pred ccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGA-GIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+.|+|.|| |..|..++..|.++|++|.++.+++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 47999998 99999999999999999999988654
No 426
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=96.58 E-value=0.003 Score=40.71 Aligned_cols=33 Identities=24% Similarity=0.194 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
++|.|||+|..|...|..|.+.|+.|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 579999999999999999999999999998764
No 427
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.55 E-value=0.0035 Score=42.27 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI--KPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~ 37 (115)
..+|+|||+|..|..+|..|+..++ ++.++|.+
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 4689999999999999999999887 79999864
No 428
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.54 E-value=0.003 Score=41.89 Aligned_cols=33 Identities=18% Similarity=0.318 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..+|+|||+|.+|+.+|..|++.+ +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 368999999999999999999998 699998763
No 429
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.54 E-value=0.0043 Score=47.65 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
..+|+|||||..|+.+|..+.+.|. +|+++++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3489999999999999999999997 899999875
No 430
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.53 E-value=0.0048 Score=40.35 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=30.8
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 7 DVVIIGA-GIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 7 ~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
+|+|.|| |..|..++..|.++|++|+++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 6999998 999999999999999999999886543
No 431
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.51 E-value=0.0055 Score=41.80 Aligned_cols=35 Identities=31% Similarity=0.493 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
...|+|+|+|..|..++..+.+.|++|.+++..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46799999999999999999999999999987554
No 432
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.50 E-value=0.0053 Score=40.29 Aligned_cols=35 Identities=34% Similarity=0.480 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+++|+|+|-+|..++..|.+.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999988754
No 433
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=96.49 E-value=0.0032 Score=46.66 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+|.|||+|..|...|..+++.|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999765
No 434
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.49 E-value=0.0035 Score=44.03 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
...|+|||+|.+|...+..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 467999999999999999999999999999864
No 435
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.48 E-value=0.0041 Score=42.02 Aligned_cols=34 Identities=12% Similarity=0.349 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI--KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~ 38 (115)
..+|.|||+|..|..+|..++..|+ ++.++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 3689999999999999999999997 899998743
No 436
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.47 E-value=0.0046 Score=40.37 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
...++|+|+|-+|..+|..|++.|.+|++++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999998763
No 437
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=96.47 E-value=0.0056 Score=40.15 Aligned_cols=36 Identities=28% Similarity=0.323 Sum_probs=31.8
Q ss_pred ccccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+.++|+|.|| |..|..++..|.++|++|.++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3578999999 99999999999999999999988654
No 438
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=96.46 E-value=0.0019 Score=42.33 Aligned_cols=33 Identities=30% Similarity=0.350 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
++|.|||+|..|...|..|.+.|++|.+++ ++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~ 36 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGP 36 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHH
Confidence 479999999999999999999999999998 554
No 439
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.45 E-value=0.0048 Score=42.28 Aligned_cols=34 Identities=38% Similarity=0.498 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
...|+|+|+|..|+.+|..++..|.+|+++++++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999764
No 440
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.45 E-value=0.0054 Score=41.41 Aligned_cols=33 Identities=15% Similarity=0.433 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI--KPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~ 37 (115)
..+|.|||+|..|...|+.|...|+ ++.++|.+
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 4689999999999999999999987 78999865
No 441
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=96.42 E-value=0.0042 Score=40.70 Aligned_cols=33 Identities=36% Similarity=0.493 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCceEEEcCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRL--GIKPLVLEKSD 38 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~--g~~v~viE~~~ 38 (115)
.+|.|||+|..|...|..|.+. +++|.++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5799999999999999999987 67899998754
No 442
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.42 E-value=0.0057 Score=37.98 Aligned_cols=32 Identities=28% Similarity=0.315 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 7 DVVIIGA-GIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+|+|.|| |..|..++..|.++|++|.++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999998874
No 443
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=96.41 E-value=0.0043 Score=38.45 Aligned_cols=39 Identities=18% Similarity=0.211 Sum_probs=31.4
Q ss_pred CCCccccEEEEC-CCHHHHHHHHHHHHCCC--ceEEEcCCCC
Q 047339 1 METVEKDVVIIG-AGIAGLATALALKRLGI--KPLVLEKSDG 39 (115)
Q Consensus 1 m~~~~~~v~IvG-~G~~Gl~~A~~l~~~g~--~v~viE~~~~ 39 (115)
|+.|.++|+|.| +|..|..++..|.++|. +|.++.+++.
T Consensus 1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~ 42 (215)
T 2a35_A 1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL 42 (215)
T ss_dssp ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC
T ss_pred CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCc
Confidence 555667899999 59999999999999998 9998887654
No 444
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.40 E-value=0.0051 Score=41.42 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=29.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGI--KPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~ 37 (115)
.+.+|+|||+|.+|.++|+.|...+. .+.++|.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 45789999999999999999998886 78888864
No 445
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.39 E-value=0.0043 Score=42.86 Aligned_cols=34 Identities=35% Similarity=0.432 Sum_probs=31.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGI-KPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~ 37 (115)
.+.+|+|+|+|.+|+.+|..+...|. +|.++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 35689999999999999999999998 99999986
No 446
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.39 E-value=0.0074 Score=41.25 Aligned_cols=35 Identities=40% Similarity=0.526 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|+|+|+|..|..++..+.+.|++|.+++..+.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 35799999999999999999999999999986543
No 447
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.37 E-value=0.0074 Score=41.86 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|+|+|+|..|..++..+++.|++|.+++..+.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 45799999999999999999999999999986543
No 448
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=96.36 E-value=0.004 Score=40.18 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=28.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEK 36 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~ 36 (115)
+|.|||+|..|..+|..|.+.|++|.++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999876
No 449
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.36 E-value=0.0048 Score=41.00 Aligned_cols=34 Identities=38% Similarity=0.491 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
..+|+|||+|-.|..+|.+|++.|+ +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999997 678888654
No 450
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.35 E-value=0.0085 Score=37.43 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=30.5
Q ss_pred ccccEEEECC-CHHHHHHHHHHH-HCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGA-GIAGLATALALK-RLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~-G~~Gl~~A~~l~-~~g~~v~viE~~~~ 39 (115)
|.+.|+|.|| |-.|..++..|. +.|++|.++.+++.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 3345999995 999999999999 89999999988654
No 451
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.34 E-value=0.0062 Score=40.65 Aligned_cols=32 Identities=34% Similarity=0.555 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
+|.|||+|..|..+|+.++..++ .+.++|.++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999998888 599999764
No 452
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.33 E-value=0.0055 Score=40.64 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
..+++|+|+|.+|..+|..|.+.|+ +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899998764
No 453
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.29 E-value=0.007 Score=37.73 Aligned_cols=32 Identities=28% Similarity=0.467 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 7 DVVIIGA-GIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+|+|.|| |..|..++..|.++|++|.++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999998764
No 454
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.27 E-value=0.0086 Score=40.63 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=29.0
Q ss_pred cccEEEECC-CHHHHHHHHHHHHCCC--ceEEEcCC
Q 047339 5 EKDVVIIGA-GIAGLATALALKRLGI--KPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~-G~~Gl~~A~~l~~~g~--~v~viE~~ 37 (115)
..+|+|||+ |-.|.++|+.+...|. ++.++|.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 358999997 9999999999999885 89999865
No 455
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.27 E-value=0.0057 Score=40.03 Aligned_cols=34 Identities=32% Similarity=0.510 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..+++|||+|.+|..+|..|.+.|++|.+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999998764
No 456
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=96.27 E-value=0.0089 Score=41.36 Aligned_cols=35 Identities=20% Similarity=0.534 Sum_probs=31.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+.++|+|+|+|..|..++..+.+.|++|.+++..+
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~ 52 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYA 52 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34689999999999999999999999999998654
No 457
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.27 E-value=0.0064 Score=40.76 Aligned_cols=33 Identities=27% Similarity=0.554 Sum_probs=29.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--ceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI--KPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~ 37 (115)
+.+|+|||+|.+|.++|+.|...+. .+.++|.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4689999999999999999999886 78888864
No 458
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.26 E-value=0.0049 Score=41.89 Aligned_cols=37 Identities=30% Similarity=0.386 Sum_probs=28.1
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 1 METVEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 1 m~~~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|+-.+++|+|+|+|.+|-.+|..|++ .++|++.+++.
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~ 48 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNN 48 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCH
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCH
Confidence 33456789999999999999999975 57888887643
No 459
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.26 E-value=0.007 Score=38.22 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=30.8
Q ss_pred cccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+.|+|.|| |..|..++..|.++|++|.++.|++
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 467999998 9999999999999999999998864
No 460
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.26 E-value=0.0055 Score=42.20 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=31.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGI-KPLVLEKS 37 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~ 37 (115)
.+.+|+|+|+|.+|..+|..|...|. +|.++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45789999999999999999999998 79999987
No 461
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.26 E-value=0.0071 Score=41.00 Aligned_cols=34 Identities=26% Similarity=0.449 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
..+|+|||+|-.|+.+|.+|++.|+ +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4689999999999999999999997 677887644
No 462
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.23 E-value=0.0067 Score=40.00 Aligned_cols=36 Identities=19% Similarity=0.405 Sum_probs=31.4
Q ss_pred ccccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
|+..|+|.|| |..|..++..|.+.|++|.++.|+..
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 3458999996 99999999999999999999988754
No 463
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.23 E-value=0.0048 Score=45.17 Aligned_cols=28 Identities=36% Similarity=0.471 Sum_probs=24.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceE
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPL 32 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~ 32 (115)
..+|+|||||..|+.+|..|++.|.+|+
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vt 521 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTS 521 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcc
Confidence 4689999999999999999998885443
No 464
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.23 E-value=0.0075 Score=39.91 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..++.|||+|..|..+|..|...|.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4679999999999999999999999999998764
No 465
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.22 E-value=0.0076 Score=39.78 Aligned_cols=34 Identities=26% Similarity=0.422 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..++.|||.|..|..+|..|...|.+|.++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999998764
No 466
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=96.20 E-value=0.0041 Score=41.83 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=29.6
Q ss_pred ccccEEEEC-CCHHHHHHHHHHHHCC--CceEEEcCCC
Q 047339 4 VEKDVVIIG-AGIAGLATALALKRLG--IKPLVLEKSD 38 (115)
Q Consensus 4 ~~~~v~IvG-~G~~Gl~~A~~l~~~g--~~v~viE~~~ 38 (115)
.+.+|+|+| +|..|..++..|...| .++.++|.++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 456899999 7999999999999988 6888998654
No 467
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.19 E-value=0.0071 Score=39.84 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~~ 39 (115)
..+++|+|+|-+|..++..|.+.|. +|+|+.|+..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 4679999999999999999999998 8999988754
No 468
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=95.15 E-value=0.00086 Score=42.06 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.++|.|||+|..|..+|..|.+.|++|.++++++.
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 45799999999999999999999999999987654
No 469
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.15 E-value=0.0051 Score=41.05 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=31.4
Q ss_pred ccccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+.+.|+|.|| |..|..++..|.++|++|.++.+...
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3568999996 99999999999999999999988543
No 470
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.14 E-value=0.0077 Score=42.19 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--------------------CC-ceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRL--------------------GI-KPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~--------------------g~-~v~viE~~~~ 39 (115)
..+|+|||+|.+|+-+|..|++. |. +|+|+++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 35799999999999999999874 54 8999998754
No 471
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.14 E-value=0.0055 Score=40.07 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
...++|+|+|-+|..+|..|.+.|.+|+|+.|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999998764
No 472
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.07 E-value=0.0096 Score=38.93 Aligned_cols=37 Identities=30% Similarity=0.430 Sum_probs=31.2
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 1 METVEKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 1 m~~~~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|+++ ..|+|.|| |..|..++..|.+.|++|.++.|+.
T Consensus 1 M~~~-~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSR-SRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCC-CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCC-CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 5433 56999997 9999999999999999999998864
No 473
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.07 E-value=0.0076 Score=43.20 Aligned_cols=36 Identities=11% Similarity=0.052 Sum_probs=32.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+.+++|+|.|..|..+|..|.+.|++|+++|.++.
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~ 161 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYD 161 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHH
T ss_pred cCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHH
Confidence 467899999999999999999999999999997753
No 474
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.06 E-value=0.012 Score=41.77 Aligned_cols=34 Identities=35% Similarity=0.404 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
...++|+|+|..|..+|..|+..|.+|.++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3578999999999999999999999999998754
No 475
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=96.06 E-value=0.012 Score=38.12 Aligned_cols=32 Identities=34% Similarity=0.577 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
+++|||+|-+|...|..|.+.|++|.+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999998763
No 476
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.06 E-value=0.013 Score=39.04 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=30.5
Q ss_pred cccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+.|+|.|| |..|..++..|.++|++|.++.+.+.
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 468999998 99999999999999999999988753
No 477
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.05 E-value=0.0074 Score=39.08 Aligned_cols=33 Identities=30% Similarity=0.492 Sum_probs=29.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~ 37 (115)
..+|+|||+|-.|..+|..|++.|+ +++|+|..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4689999999999999999999997 67888754
No 478
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.05 E-value=0.012 Score=39.72 Aligned_cols=34 Identities=29% Similarity=0.376 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.|||.|..|..+|..|+..|++|.++++...
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 5799999999999999999999999999998654
No 479
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.05 E-value=0.0093 Score=42.40 Aligned_cols=34 Identities=35% Similarity=0.356 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
...|+|+|.|..|..+|..|+..|.+|.++|+++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999754
No 480
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.05 E-value=0.0063 Score=40.70 Aligned_cols=32 Identities=25% Similarity=0.346 Sum_probs=28.7
Q ss_pred cEEEECC-CHHHHHHHHHHHHCC--CceEEEcCCC
Q 047339 7 DVVIIGA-GIAGLATALALKRLG--IKPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~-G~~Gl~~A~~l~~~g--~~v~viE~~~ 38 (115)
+|+|+|+ |..|..++..|+..+ ..+.++|.++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 999999999999988 5799998764
No 481
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.04 E-value=0.0083 Score=40.82 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
..+|+|||+|-.|..+|..|++.|+ +++|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4689999999999999999999997 688888653
No 482
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.04 E-value=0.011 Score=38.89 Aligned_cols=33 Identities=24% Similarity=0.481 Sum_probs=30.0
Q ss_pred cccEEEECC-CHHHHHHHHHHHHCCCceEEEcCC
Q 047339 5 EKDVVIIGA-GIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
.++|+|.|| |..|..++..|.++|++|.++.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 357999995 999999999999999999999887
No 483
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.03 E-value=0.0077 Score=42.09 Aligned_cols=34 Identities=35% Similarity=0.397 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
-..++|+|.|..|..+|..|...|.+|.++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3579999999999999999999999999999754
No 484
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.01 E-value=0.016 Score=39.33 Aligned_cols=35 Identities=23% Similarity=0.228 Sum_probs=31.0
Q ss_pred cccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+.|+|.|| |..|..++..|.++|++|.++.+...
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 64 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN 64 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCc
Confidence 357999998 99999999999999999999987653
No 485
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.01 E-value=0.0067 Score=40.61 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=29.0
Q ss_pred cccEEEECC-CHHHHHHHHHHHHCCC-------ceEEEcCC
Q 047339 5 EKDVVIIGA-GIAGLATALALKRLGI-------KPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~-G~~Gl~~A~~l~~~g~-------~v~viE~~ 37 (115)
+++|+|+|| |..|..++..|.++|+ +|.++|..
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 458999998 9999999999999886 79999864
No 486
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=96.01 E-value=0.014 Score=38.66 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=31.1
Q ss_pred ccccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 4 VEKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 4 ~~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
+.+.|+|.|| |..|..++..|.++|++|.++.+...
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 4468999995 99999999999999999999987543
No 487
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=96.00 E-value=0.0067 Score=45.17 Aligned_cols=34 Identities=26% Similarity=0.501 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 6 KDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 6 ~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
.+|.|||+|..|.-.|..++..|++|+++|.++.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 5799999999999999999999999999997653
No 488
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.00 E-value=0.0093 Score=39.18 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=28.5
Q ss_pred cccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+.|+|.|| |..|..++..|.++|++|.++.++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 357999998 9999999999999999999998653
No 489
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=95.99 E-value=0.0087 Score=37.74 Aligned_cols=38 Identities=32% Similarity=0.370 Sum_probs=29.3
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 1 METVEKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 1 m~~~~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
|+.+.+.++|.|| |-.|..+|..|.++|++|.++.++.
T Consensus 1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~ 39 (234)
T 2ehd_A 1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDE 39 (234)
T ss_dssp ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 6666667888875 5679999999999999999998753
No 490
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.99 E-value=0.012 Score=40.55 Aligned_cols=33 Identities=30% Similarity=0.467 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
..+|+|+|+|..|..++..+.+.|++|.+++ .+
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 5689999999999999999999999999999 54
No 491
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.97 E-value=0.014 Score=37.91 Aligned_cols=32 Identities=34% Similarity=0.498 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
+++|+|+|-+|..++..|.+.|. +|.|++|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 899998864
No 492
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.95 E-value=0.0099 Score=39.49 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--ceEEEcCCC
Q 047339 7 DVVIIGAGIAGLATALALKRLGI--KPLVLEKSD 38 (115)
Q Consensus 7 ~v~IvG~G~~Gl~~A~~l~~~g~--~v~viE~~~ 38 (115)
+|.|||+|-.|.++|+.|..++. ++.|+|.++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 79999999999999999998875 688998654
No 493
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=95.93 E-value=0.012 Score=40.24 Aligned_cols=33 Identities=24% Similarity=0.219 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~ 37 (115)
...|+|+|.|..|..+|..|.+.|.+|++.|.+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 467999999999999999999999999988753
No 494
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=95.92 E-value=0.016 Score=38.48 Aligned_cols=34 Identities=29% Similarity=0.525 Sum_probs=29.6
Q ss_pred cccEEEECC-CHHHHHHHHHHHHCCCceEEEcCCC
Q 047339 5 EKDVVIIGA-GIAGLATALALKRLGIKPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~-G~~Gl~~A~~l~~~g~~v~viE~~~ 38 (115)
.+.|+|.|| |..|..++..|.++|++|.++.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFH 36 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 357999985 9999999999999999999997643
No 495
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.90 E-value=0.011 Score=42.22 Aligned_cols=36 Identities=17% Similarity=0.407 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+|+|||+|.+|+-+|..+++.+.+|+++++.+..
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 468999999999999999999999999999987653
No 496
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.88 E-value=0.011 Score=40.92 Aligned_cols=34 Identities=32% Similarity=0.509 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
...|+|+|+|..|..++..|...|. +|+++++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4579999999999999999999998 899998764
No 497
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.86 E-value=0.014 Score=39.17 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKS 37 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~ 37 (115)
...++|+|+|-+|..+|..|++.|. +|+|+.|+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 4579999999999999999999998 89999887
No 498
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.86 E-value=0.015 Score=38.34 Aligned_cols=34 Identities=38% Similarity=0.400 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-ceEEEcCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGI-KPLVLEKSD 38 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~-~v~viE~~~ 38 (115)
...++|+|+|-+|..++..|++.|. +|+|+.|+.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 4579999999999999999999998 699998764
No 499
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=95.84 E-value=0.015 Score=39.07 Aligned_cols=35 Identities=31% Similarity=0.433 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDG 39 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~ 39 (115)
..+|.|||.|..|..+|..|+..|++|.+++++..
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 189 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQP 189 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 35799999999999999999999999999997653
No 500
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=95.83 E-value=0.018 Score=38.88 Aligned_cols=36 Identities=31% Similarity=0.272 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCceEEEcCCCCC
Q 047339 5 EKDVVIIGAGIAGLATALALKRLGIKPLVLEKSDGL 40 (115)
Q Consensus 5 ~~~v~IvG~G~~Gl~~A~~l~~~g~~v~viE~~~~~ 40 (115)
..+|.|||.|-.|..+|..|+..|.+|.++++....
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~ 199 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKP 199 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchh
Confidence 357999999999999999999999999999987653
Done!