BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047340
(67 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49816|LEA1_CICAR Late embryogenesis abundant protein 1 OS=Cicer arietinum PE=2 SV=1
Length = 177
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 17 GQAQEKANTMMDKAGNAAQSAKDS----MNQAGEQVKAKAQGAADSVKNATGM 65
G+A+EK + M AQS KD+ + Q GE+VK AQGA D+VK GM
Sbjct: 110 GRAREKGSEMGQSTKETAQSGKDNSAGFLQQTGEKVKGMAQGATDAVKQTFGM 162
>sp|O49817|LEA2_CICAR Late embryogenesis abundant protein 2 OS=Cicer arietinum PE=2 SV=1
Length = 155
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 17 GQAQEKANTMMDKAGNAAQSAKDS----MNQAGEQVKAKAQGAADSVKNATGMN 66
G+A+EK + M AQS KD+ + Q GE+ K AQGA D+VK GM
Sbjct: 88 GRAKEKGSEMGQSTKETAQSGKDNSAGFLQQTGEKAKGMAQGATDAVKQTFGMT 141
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 17/74 (22%)
Query: 4 NSQKMSYQAGEAKGQAQEKANTMMDKAGN--------------AAQSAKDSMNQAGEQVK 49
S SY+AGEAKG+ +EK N M+ GN AAQ+AKD +Q + K
Sbjct: 2 TSHDQSYRAGEAKGRTEEKTNQMI---GNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAK 58
Query: 50 AKAQGAADSVKNAT 63
K Q A + K+ T
Sbjct: 59 EKTQQTAQAAKDKT 72
>sp|P31169|KIN2_ARATH Stress-induced protein KIN2 OS=Arabidopsis thaliana GN=KIN2 PE=1
SV=1
Length = 66
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 5 SQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATG 64
+ K ++QAG+A G+A+EK+N ++DKA +AA +A S QAG+ + A G + VK+ TG
Sbjct: 4 TNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTG 63
Query: 65 MNK 67
+NK
Sbjct: 64 LNK 66
>sp|P13934|LEA76_BRANA Late embryogenesis abundant protein 76 OS=Brassica napus PE=2 SV=2
Length = 280
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 12/67 (17%)
Query: 11 QAGEA-KGQAQEKANTMMDKAGNAAQSAKDS-----------MNQAGEQVKAKAQGAADS 58
+ GEA K +AQ+ A + A NAAQ K++ ++Q GE VK A GAAD+
Sbjct: 151 ETGEAVKQKAQDAAQYTKETAQNAAQYTKETAEAGKDKTGGFLSQTGEHVKQMAMGAADA 210
Query: 59 VKNATGM 65
VK+ GM
Sbjct: 211 VKHTFGM 217
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 1 MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
MA N Q SY+AGE +G+ QEK M + A+ KD +Q ++ + KAQ A + K
Sbjct: 1 MASNQQ--SYKAGETRGKTQEKTGQAMGAMRDKAEEGKDKTSQTAQKAQQKAQETAQAAK 58
Query: 61 NAT 63
+ T
Sbjct: 59 DKT 61
>sp|P83442|LEAD3_DAUCA Late embryogenesis abundant protein Dc3 OS=Daucus carota PE=2
SV=1
Length = 163
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 4 NSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKD 39
+ Q SY+AGE KG AQEK M D + AQ+AKD
Sbjct: 3 SHQDQSYKAGEPKGHAQEKTGQMADTMKDKAQAAKD 38
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 20 QEKANTMMDKAGNAAQSAKDS----MNQAGEQVKAKAQGAADSVKNATGM 65
+EKA+ M + A A + K+ M+ A EQVK AQGA ++VKN GM
Sbjct: 92 KEKASEMGESAKETAVAGKEKTGGLMSSAAEQVKGMAQGATEAVKNTFGM 141
>sp|P18612|KIN1_ARATH Stress-induced protein KIN1 OS=Arabidopsis thaliana GN=KIN1 PE=1
SV=1
Length = 66
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 5 SQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATG 64
+ K ++QAG+ G+A+EK+N ++DKA +AA A QAG+ V A G + VK+ TG
Sbjct: 4 TNKNAFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVKDKTG 63
Query: 65 MNK 67
+NK
Sbjct: 64 LNK 66
>sp|Q03968|LEA3_WHEAT Late embryogenesis abundant protein, group 3 OS=Triticum aestivum
PE=2 SV=1
Length = 224
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 1 MADNSQKMSYQAGEAKGQAQEKANTMM----DKAGNAAQSAKDSMNQAGEQVKAKAQGAA 56
MA N + SY AGE K + +EK +M DKAG Q+ + + +AGE +A Q AA
Sbjct: 1 MASNQNQASYHAGETKARNEEKTGQVMGATKDKAG---QTTEATKQKAGETTEATKQKAA 57
Query: 57 DSVKNA 62
++ + A
Sbjct: 58 ETTEAA 63
>sp|P13939|LEAD7_GOSHI Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum PE=2
SV=1
Length = 136
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 41 MNQAGEQVKAKAQGAADSVKNATGM 65
+ QAGE+V+ AQGA D+VK+ GM
Sbjct: 94 LQQAGEKVRNAAQGATDAVKHTFGM 118
>sp|Q42376|LEA3_MAIZE Late embryogenesis abundant protein, group 3 OS=Zea mays GN=MGL3
PE=2 SV=1
Length = 221
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 1 MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKD 39
MA + K SYQAGE K + +EK + + AQ AKD
Sbjct: 1 MASHQDKASYQAGETKARTEEKTGQAVGATKDTAQHAKD 39
>sp|A2Y720|LEA3_ORYSI Late embryogenesis abundant protein, group 3 OS=Oryza sativa
subsp. indica GN=LEA3 PE=1 SV=1
Length = 200
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 1 MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQA 44
MA + + SY+AGE K +EKA +M + + A AKD ++A
Sbjct: 1 MASHQDQASYRAGETKAHTEEKAGQVMGASKDKASEAKDRASEA 44
>sp|P0C5A4|LEA3_ORYSJ Late embryogenesis abundant protein, group 3 OS=Oryza sativa
subsp. japonica GN=LEA3 PE=2 SV=1
Length = 200
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 1 MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQA 44
MA + + SY+AGE K +EKA +M + + A AKD ++A
Sbjct: 1 MASHQDQASYRAGETKAHTEEKAGQVMGASKDKASEAKDRASEA 44
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.296 0.107 0.265
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,230,170
Number of Sequences: 539616
Number of extensions: 452673
Number of successful extensions: 1487
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1321
Number of HSP's gapped (non-prelim): 155
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (22.0 bits)
S2: 55 (25.8 bits)