Query 047340
Match_columns 67
No_of_seqs 92 out of 104
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 10:11:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047340.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047340hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4744 Uncharacterized conser 97.3 0.0012 2.5E-08 50.3 6.8 56 6-61 85-140 (308)
2 PF02987 LEA_4: Late embryogen 96.8 0.008 1.7E-07 33.2 5.6 36 9-44 5-40 (44)
3 PF02987 LEA_4: Late embryogen 96.3 0.029 6.4E-07 30.9 6.1 37 18-54 3-39 (44)
4 COG3237 Uncharacterized protei 96.0 0.041 8.8E-07 33.8 5.9 63 1-63 1-67 (67)
5 KOG4744 Uncharacterized conser 95.1 0.13 2.9E-06 39.3 7.2 52 10-61 166-228 (308)
6 PF14013 MT0933_antitox: MT093 87.2 2.4 5.2E-05 24.3 4.7 48 11-64 4-51 (51)
7 PF05957 DUF883: Bacterial pro 83.1 8.2 0.00018 23.5 7.8 49 13-61 19-67 (94)
8 PF12732 YtxH: YtxH-like prote 80.8 9.1 0.0002 22.5 6.3 19 18-36 30-48 (74)
9 PF12732 YtxH: YtxH-like prote 79.1 11 0.00023 22.2 6.7 17 10-26 33-49 (74)
10 PF05957 DUF883: Bacterial pro 58.0 40 0.00087 20.4 8.2 20 13-32 30-49 (94)
11 PF11034 DUF2823: Protein of u 57.5 25 0.00053 21.8 3.8 15 49-63 39-53 (68)
12 PF05532 CsbD: CsbD-like; Int 52.2 5 0.00011 22.9 0.1 47 11-60 6-52 (53)
13 PRK10428 hypothetical protein; 45.9 66 0.0014 19.3 5.2 23 6-28 4-26 (69)
14 PF08102 Antimicrobial_7: Scor 30.0 90 0.002 17.7 2.9 25 42-66 17-42 (43)
15 PF11727 ISG65-75: Invariant s 24.8 2.8E+02 0.0061 20.2 6.6 45 21-65 99-143 (286)
16 PF07918 CAP160: CAP160 repeat 24.2 1E+02 0.0023 15.9 2.3 20 47-66 7-26 (27)
17 PTZ00208 65 kDa invariant surf 22.6 3.4E+02 0.0074 22.1 6.0 25 41-65 124-148 (436)
18 PF05802 EspB: Enterobacterial 21.3 4E+02 0.0088 20.8 8.0 46 10-55 153-198 (317)
19 PRK10404 hypothetical protein; 20.3 2.5E+02 0.0053 17.9 6.6 42 20-61 33-78 (101)
No 1
>KOG4744 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.27 E-value=0.0012 Score=50.25 Aligned_cols=56 Identities=41% Similarity=0.391 Sum_probs=39.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHH
Q 047340 6 QKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKN 61 (67)
Q Consensus 6 ~~~s~~AGea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA~davK~ 61 (67)
+..+++||++++.+.||+++.++.+.+.+.+++|...|+-..+.+.+..+.|.+++
T Consensus 85 ~~a~~kA~~a~~~A~eKag~A~d~a~dka~s~kD~a~qakDkA~~~a~~~~d~A~D 140 (308)
T KOG4744|consen 85 DKASDKAGEAKDKAYEKAGSAKDTAKDKAGSAKDKASQAKDKAYEAAGLVKDSAYD 140 (308)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999888887766665544444444444443333333
No 2
>PF02987 LEA_4: Late embryogenesis abundant protein; InterPro: IPR004238 Different types of late embryogenesis abundant (LEA) proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This entry represents a repeat characteristic of some LEA proteins, including LEA3 [, ].
Probab=96.78 E-value=0.008 Score=33.15 Aligned_cols=36 Identities=42% Similarity=0.446 Sum_probs=22.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 047340 9 SYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQA 44 (67)
Q Consensus 9 s~~AGea~gqaqeKa~~~m~~ak~aAqaakd~~qqa 44 (67)
..++++++..+.+|+.++.+++.+++..+||++.+.
T Consensus 5 ~~Ka~e~~d~a~~ka~e~kd~a~eKa~eaKd~a~ek 40 (44)
T PF02987_consen 5 KEKASEAKDAAKEKAGEAKDAAAEKAEEAKDSAKEK 40 (44)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666666666666666666655443
No 3
>PF02987 LEA_4: Late embryogenesis abundant protein; InterPro: IPR004238 Different types of late embryogenesis abundant (LEA) proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This entry represents a repeat characteristic of some LEA proteins, including LEA3 [, ].
Probab=96.33 E-value=0.029 Score=30.87 Aligned_cols=37 Identities=35% Similarity=0.389 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh
Q 047340 18 QAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQG 54 (67)
Q Consensus 18 qaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~Aqg 54 (67)
.+.+|++++-+.+.+.+..++|.+.+-...++..+.+
T Consensus 3 ~a~~Ka~e~~d~a~~ka~e~kd~a~eKa~eaKd~a~e 39 (44)
T PF02987_consen 3 AAKEKASEAKDAAKEKAGEAKDAAAEKAEEAKDSAKE 39 (44)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888888888887777666666665555444
No 4
>COG3237 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.97 E-value=0.041 Score=33.82 Aligned_cols=63 Identities=29% Similarity=0.369 Sum_probs=52.1
Q ss_pred CcchhHHHhhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHh
Q 047340 1 MADNSQKMSYQAGEAKGQAQEKANTMMDK----AGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNAT 63 (67)
Q Consensus 1 m~~~s~~~s~~AGea~gqaqeKa~~~m~~----ak~aAqaakd~~qqageqvk~~AqgA~davK~~~ 63 (67)
|++.++.+.-++-+++|.++|..+.+.+. +.-+++.++-.+|+.-+.+|.++-++.|.+++.+
T Consensus 1 M~~~~dr~~g~~~q~~GkvKE~~Gk~Tgd~~l~aeGka~ka~gkvqe~~g~aKd~vk~a~d~~~~~~ 67 (67)
T COG3237 1 MSDEKDRIEGKAKQAKGKVKEGVGKATGDDSLEAEGKADKAKGKVQERVGDAKDKVKKAVDDVKNRL 67 (67)
T ss_pred CCchHHHHHHHHHHhhhHHHHHHccccCCHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 56667888999999999999999999874 5555677777888998999999999988888753
No 5
>KOG4744 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.08 E-value=0.13 Score=39.26 Aligned_cols=52 Identities=40% Similarity=0.490 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHhHHHHHHHHHHhhHHHHHHH
Q 047340 10 YQAGEAKGQAQEKANTMMDKAGNAAQ-----------SAKDSMNQAGEQVKAKAQGAADSVKN 61 (67)
Q Consensus 10 ~~AGea~gqaqeKa~~~m~~ak~aAq-----------aakd~~qqageqvk~~AqgA~davK~ 61 (67)
.+++|+...+.+|+.+.-++++|.|. .+++.+.++.+.++.+++.+.|..++
T Consensus 166 eka~e~a~sA~dkA~dake~Ak~~A~d~~d~a~e~~~~A~dk~~et~e~~Kdka~d~~e~A~d 228 (308)
T KOG4744|consen 166 EKAGEAADSARDKAADAKESAKNKAEDTKDSAPEAAGSAKDKAAETAEKAKDKAQDAKEKAKD 228 (308)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 45555555555555555555555554 56666777777777777776666654
No 6
>PF14013 MT0933_antitox: MT0933-like antitoxin protein
Probab=87.23 E-value=2.4 Score=24.31 Aligned_cols=48 Identities=25% Similarity=0.412 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHhc
Q 047340 11 QAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATG 64 (67)
Q Consensus 11 ~AGea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA~davK~~~G 64 (67)
+|.+...+-.+|..+.++++.+.+- .-||..-......+.|++++.||
T Consensus 4 Kak~~~~~~~dk~~~~iDKA~d~vd------~kTGgKy~dqId~~~d~a~~~lg 51 (51)
T PF14013_consen 4 KAKDLASKNPDKIDQGIDKAGDFVD------EKTGGKYSDQIDKAQDKAKDALG 51 (51)
T ss_pred HHHHHHHHChHHHHHHHHHHHHHHH------hhcCCchHHHHHHHHHHHHhhcC
Confidence 5566666667777777777777554 34666666666777777777765
No 7
>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD.
Probab=83.10 E-value=8.2 Score=23.52 Aligned_cols=49 Identities=31% Similarity=0.409 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHH
Q 047340 13 GEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKN 61 (67)
Q Consensus 13 Gea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA~davK~ 61 (67)
..+...+.++++++-+.+.+....+++.+.+..+++...+..+.+.+.+
T Consensus 19 ~~~~~~~~~~~~~~r~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 67 (94)
T PF05957_consen 19 RSAADLAGEKADEARDRAEEALDDARDRAEDAADQAREQAREAAEQTED 67 (94)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555666666666666677777777777776666665555443
No 8
>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.
Probab=80.85 E-value=9.1 Score=22.50 Aligned_cols=19 Identities=26% Similarity=0.393 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 047340 18 QAQEKANTMMDKAGNAAQS 36 (67)
Q Consensus 18 qaqeKa~~~m~~ak~aAqa 36 (67)
...++++++.+++.+....
T Consensus 30 ~l~~~~~~~~~~~~~~~~~ 48 (74)
T PF12732_consen 30 KLKDKAEDLKDKAKDLYEE 48 (74)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333334444444443333
No 9
>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.
Probab=79.09 E-value=11 Score=22.21 Aligned_cols=17 Identities=18% Similarity=0.179 Sum_probs=6.4
Q ss_pred hHHHHHHHHHHHHHHHH
Q 047340 10 YQAGEAKGQAQEKANTM 26 (67)
Q Consensus 10 ~~AGea~gqaqeKa~~~ 26 (67)
..+.+.+.+.++...++
T Consensus 33 ~~~~~~~~~~~~~~~~~ 49 (74)
T PF12732_consen 33 DKAEDLKDKAKDLYEEA 49 (74)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 10
>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD.
Probab=57.96 E-value=40 Score=20.42 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 047340 13 GEAKGQAQEKANTMMDKAGN 32 (67)
Q Consensus 13 Gea~gqaqeKa~~~m~~ak~ 32 (67)
.+++.+..++..++-+.+.+
T Consensus 30 ~~~r~~~~~~~~~a~~~~~~ 49 (94)
T PF05957_consen 30 DEARDRAEEALDDARDRAED 49 (94)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 11
>PF11034 DUF2823: Protein of unknown function (DUF2823); InterPro: IPR020100 This fungal protein increases during glucose depravation. Its function is unknown [].
Probab=57.53 E-value=25 Score=21.76 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=9.3
Q ss_pred HHHHhhHHHHHHHHh
Q 047340 49 KAKAQGAADSVKNAT 63 (67)
Q Consensus 49 k~~AqgA~davK~~~ 63 (67)
...+..|.|+|.++.
T Consensus 39 gtRa~AA~dav~DK~ 53 (68)
T PF11034_consen 39 GTRASAAKDAVGDKI 53 (68)
T ss_pred hHHHHHHHHHHhhhh
Confidence 345666777776653
No 12
>PF05532 CsbD: CsbD-like; InterPro: IPR008462 CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor []. The role of CsbD in stress response is unclear.; PDB: 1YWW_A 1RYK_A.
Probab=52.22 E-value=5 Score=22.90 Aligned_cols=47 Identities=30% Similarity=0.389 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHH
Q 047340 11 QAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60 (67)
Q Consensus 11 ~AGea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA~davK 60 (67)
++-+++|.++|..+.+.+.- -..+.-.++|+...+++..-.+.|.++
T Consensus 6 ~~~~~kGk~Ke~~G~~tgd~---~~qaeG~~~q~~G~~q~~~g~~kd~~~ 52 (53)
T PF05532_consen 6 KADQAKGKVKEAAGKLTGDE---ELQAEGKAEQAKGKAQEKAGDAKDAAK 52 (53)
T ss_dssp CHHHHHHHHHHHTTTS-HHH---HCCCTTSHHHHHHHHHHHT---HHHHH
T ss_pred HHHHHhhHHHHHHHhccCCH---HHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 34567788888777775532 222233344444444444444555443
No 13
>PRK10428 hypothetical protein; Provisional
Probab=45.85 E-value=66 Score=19.32 Aligned_cols=23 Identities=17% Similarity=0.219 Sum_probs=16.4
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHH
Q 047340 6 QKMSYQAGEAKGQAQEKANTMMD 28 (67)
Q Consensus 6 ~~~s~~AGea~gqaqeKa~~~m~ 28 (67)
+++.=+.-+++|...|+.+.+.+
T Consensus 4 D~i~G~~~q~kGkvKe~~GklT~ 26 (69)
T PRK10428 4 DEAGGNWKQFKGKVKEQWGKLTD 26 (69)
T ss_pred HHHhhhHHHHHHHHHHHHHhccC
Confidence 44455566788888888888855
No 14
>PF08102 Antimicrobial_7: Scorpion antimicrobial peptide ; InterPro: IPR012526 This family consists of antimicrobial peptides secreted by scorpions. Novel antimicrobial peptides have been isolated from scorpions, namely the opistoporin [] and the pandinin []. These peptides form essentially helical structures and demonstrate high antimicrobial activity against Gram-negative and Gram-positive bacteria respectively.; GO: 0005576 extracellular region
Probab=29.97 E-value=90 Score=17.72 Aligned_cols=25 Identities=28% Similarity=0.308 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHhh-HHHHHHHHhccC
Q 047340 42 NQAGEQVKAKAQG-AADSVKNATGMN 66 (67)
Q Consensus 42 qqageqvk~~Aqg-A~davK~~~Gm~ 66 (67)
++.+++.|+++-+ |.+.|-+++|..
T Consensus 17 S~~~~~Lk~kalnAaknfVaeKiGat 42 (43)
T PF08102_consen 17 SDPVQQLKNKALNAAKNFVAEKIGAT 42 (43)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6788899999988 568899998863
No 15
>PF11727 ISG65-75: Invariant surface glycoprotein; InterPro: IPR021057 This family is found in Trypanosome species, and appears to be one of two invariant surface glycoproteins, ISG65 and ISG75, that are found in the mammalian stage of the parasitic protozoan. The sequence suggests the two families are polypeptides with N-terminal signal sequences, hydrophilic extracellular domains, single trans-membrane alpha-helices and short cytoplasmic domains. They are both expressed in the bloodstream form but not in the midgut stage. Both polypeptides are distributed over the entire surface of the parasite [, ].
Probab=24.78 E-value=2.8e+02 Score=20.20 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHhcc
Q 047340 21 EKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATGM 65 (67)
Q Consensus 21 eKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA~davK~~~Gm 65 (67)
+|..++.+.+++.....-+.+..+.+.+......|.++.++++|-
T Consensus 99 ~kl~~~~~~a~~~~~~~~~~a~~~~~~~~~~~~~ak~aa~~A~g~ 143 (286)
T PF11727_consen 99 KKLKEICEEAKKKNTEQLEEAKKAMEEAEETHEEAKEAAAKALGE 143 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 344444445555444444567788888888888888888888774
No 16
>PF07918 CAP160: CAP160 repeat; InterPro: IPR012418 This region featured in this family is repeated in spinach cold acclimation protein CAP160 (O50054 from SWISSPROT) CAP160 is induced during periods of drought stress; its precise function is unknown but it has been implicated in the stabilisation of membranes, cytoskeletal elements, and ribosomes. By acting as a compatible solute, it may reduce the toxic effects of cellular solutes that accumulate at high concentration []. Other members of this family are also induced by water stress, abscisic acid, and/or low temperature, such as desiccation-responsive protein 29B (Q04980 from SWISSPROT) and CDet11-24 protein (O23764 from SWISSPROT).
Probab=24.24 E-value=1e+02 Score=15.91 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=15.4
Q ss_pred HHHHHHhhHHHHHHHHhccC
Q 047340 47 QVKAKAQGAADSVKNATGMN 66 (67)
Q Consensus 47 qvk~~AqgA~davK~~~Gm~ 66 (67)
-+-.+|--|.+.|-.+||-+
T Consensus 7 ~iaDKA~~AknvvaSKLGyg 26 (27)
T PF07918_consen 7 AIADKAISAKNVVASKLGYG 26 (27)
T ss_pred HHHHHHHHHHHHHHHhccCC
Confidence 45667778888888888864
No 17
>PTZ00208 65 kDa invariant surface glycoprotein; Provisional
Probab=22.63 E-value=3.4e+02 Score=22.07 Aligned_cols=25 Identities=32% Similarity=0.428 Sum_probs=21.2
Q ss_pred HhHHHHHHHHHHhhHHHHHHHHhcc
Q 047340 41 MNQAGEQVKAKAQGAADSVKNATGM 65 (67)
Q Consensus 41 ~qqageqvk~~AqgA~davK~~~Gm 65 (67)
+.++++.+.-..+...++.|+++|-
T Consensus 124 Akk~~eEaek~~~~VKeAAk~ArG~ 148 (436)
T PTZ00208 124 AKKAGEEAEKLHQEVKKAAKNARGW 148 (436)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4678888888899999999999884
No 18
>PF05802 EspB: Enterobacterial EspB protein
Probab=21.29 E-value=4e+02 Score=20.77 Aligned_cols=46 Identities=26% Similarity=0.271 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhH
Q 047340 10 YQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGA 55 (67)
Q Consensus 10 ~~AGea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA 55 (67)
-++-|+...+=+|+.+.|+.+-.....+-+.+.+..+.|+.-|+-+
T Consensus 153 qkyaEsl~d~~~KAseiMQQim~t~T~Aa~r~s~v~ddv~~~a~~a 198 (317)
T PF05802_consen 153 QKYAESLADAMEKASEIMQQIMATATKAASRTSGVADDVATSAQKA 198 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3444555556667777776665555566666655555555444433
No 19
>PRK10404 hypothetical protein; Provisional
Probab=20.29 E-value=2.5e+02 Score=17.88 Aligned_cols=42 Identities=24% Similarity=0.275 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHH----HHHHHhhHHHHHHH
Q 047340 20 QEKANTMMDKAGNAAQSAKDSMNQAGEQ----VKAKAQGAADSVKN 61 (67)
Q Consensus 20 qeKa~~~m~~ak~aAqaakd~~qqageq----vk~~AqgA~davK~ 61 (67)
-++..++=+++...-..+++.+.++.+. .+..+..+-++|.+
T Consensus 33 ~e~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~k~aa~~td~yV~e 78 (101)
T PRK10404 33 DQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHE 78 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444444444444445455544443 34445555566654
Done!