BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047344
(80 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P60039|RL73_ARATH 60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2
SV=1
Length = 242
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 5/59 (8%)
Query: 15 FNPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK KKIL R+IFNG+FLK N T++M + Y+TYGYPNLK+V+ELIY GY
Sbjct: 95 IDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGY 153
>sp|Q9LHP1|RL74_ARATH 60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2
SV=1
Length = 244
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 5/59 (8%)
Query: 15 FNPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK KKIL R+IFNG+FLK N TI+M + Y+TYGYPNLK+V+ELIY G+
Sbjct: 97 IDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGF 155
>sp|P60040|RL72_ARATH 60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1
SV=1
Length = 242
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 5/59 (8%)
Query: 15 FNPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK KKIL R+IFNG+FLK N T++M + Y+TYG+PNLK+V+ELIY GY
Sbjct: 95 IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGY 153
>sp|P32100|RL7_DROME 60S ribosomal protein L7 OS=Drosophila melanogaster GN=RpL7 PE=2
SV=2
Length = 252
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 5/58 (8%)
Query: 17 PKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGYT 69
PK++K+L R+I NG+F+K N TI+M I + YIT+GYPNLK+VRELIY G+
Sbjct: 106 PKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFV 163
>sp|P14148|RL7_MOUSE 60S ribosomal protein L7 OS=Mus musculus GN=Rpl7 PE=2 SV=2
Length = 270
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 16 NPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK++K+L R+IFNG F+K N +I+M I + YI +GYPNLK+V ELIY GY
Sbjct: 124 SPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGY 181
>sp|Q4R506|RL7_MACFA 60S ribosomal protein L7 OS=Macaca fascicularis GN=RPL7 PE=2 SV=1
Length = 247
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 16 NPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK++K+L R+IFNG F+K N +I+M I + YI +GYPNLK+V ELIY GY
Sbjct: 101 SPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGY 158
>sp|Q58DT1|RL7_BOVIN 60S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=2 SV=1
Length = 248
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 16 NPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK++K+L R+IFNG F+K N +I+M I + YI +GYPNLK+V ELIY GY
Sbjct: 102 SPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGY 159
>sp|P18124|RL7_HUMAN 60S ribosomal protein L7 OS=Homo sapiens GN=RPL7 PE=1 SV=1
Length = 248
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 16 NPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK++K+L R+IFNG F+K N +I+M I + YI +GYPNLK+V ELIY GY
Sbjct: 102 SPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGY 159
>sp|P05426|RL7_RAT 60S ribosomal protein L7 OS=Rattus norvegicus GN=Rpl7 PE=1 SV=2
Length = 260
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 16 NPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK++K+L R+IFNG F+K N +++M I + YI +GYPNLK+V ELIY GY
Sbjct: 114 SPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYKRGY 171
>sp|Q5R9R4|RL7_PONAB 60S ribosomal protein L7 OS=Pongo abelii GN=RPL7 PE=2 SV=1
Length = 247
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 16 NPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK++K+L R+IFNG F+K N +I+M I + YI +GYPNLK+V ELIY GY
Sbjct: 101 SPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGY 158
>sp|Q5ZJ56|RL7_CHICK 60S ribosomal protein L7 OS=Gallus gallus GN=RPL7 PE=2 SV=1
Length = 246
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 16 NPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
+PK++K+L R+IFNG F+K N +I+M I + YI +GYPNLK+V +LIY GY
Sbjct: 100 SPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVHDLIYKRGY 157
>sp|O60143|RL7C_SCHPO 60S ribosomal protein L7-C OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl7c PE=1 SV=1
Length = 251
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 17 PKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
PK +KI++ +I NG+F+K N T M + + Y+TYG PNLK VREL+Y G+
Sbjct: 105 PKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGF 161
>sp|P17937|RL7A_SCHPO 60S ribosomal protein L7-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl7a PE=3 SV=1
Length = 249
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 17 PKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
PKI+K+LR I N +F++ N M I + Y+ YG PNL +VRELIY G+
Sbjct: 103 PKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGF 159
>sp|Q6C603|RL7_YARLI 60S ribosomal protein L7 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=RPL7 PE=3 SV=1
Length = 250
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 17 PKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
PK +K+L+ +I NG+F++ T + I + YI +GYPNL +VR+L+Y GY
Sbjct: 103 PKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGY 159
>sp|P25457|RL7B_SCHPO 60S ribosomal protein L7-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl7b PE=3 SV=1
Length = 250
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 17 PKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
PK +KI++ +I NGIF+K N M + + Y+TYG PN K VRELIY G+
Sbjct: 104 PKARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGF 160
>sp|Q7SBD5|RL7_NEUCR 60S ribosomal protein L7 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-7
PE=3 SV=2
Length = 248
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 28 NGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
NG+F++ T M I + ++ YGYPNLK+V+ELIY GY
Sbjct: 118 NGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGY 158
>sp|O01802|RL7_CAEEL 60S ribosomal protein L7 OS=Caenorhabditis elegans GN=rpl-7 PE=1
SV=1
Length = 244
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 15 FNPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGYT 69
+PK +K L R+I NG+F+K N T+ + I + Y+ +GYPN K + +L+Y GY
Sbjct: 97 LHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYA 156
>sp|P11874|RL7_DICDI 60S ribosomal protein L7 OS=Dictyostelium discoideum GN=rpl7 PE=1
SV=3
Length = 246
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 28 NGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
NG+F+K N +I+M + + Y+ YG+PNLK+++ELIY G+
Sbjct: 117 NGVFVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGH 157
>sp|Q6DKI1|RL7L_HUMAN 60S ribosomal protein L7-like 1 OS=Homo sapiens GN=RPL7L1 PE=1 SV=1
Length = 246
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 23 LREIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGG 67
L++IF+G+F+K + M I + Y+T+G+PNLK+VRELI G
Sbjct: 112 LKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRG 156
>sp|Q9SAI5|RL71_ARATH 60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2
SV=1
Length = 247
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 12 KELFNPKIKKIL-----REIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMG 66
K +PK K+IL + +F G+F KA ++ + Y+TYGYPN K+V++LIY
Sbjct: 96 KNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKK 155
Query: 67 GYT 69
G T
Sbjct: 156 GCT 158
>sp|Q5RAH8|RL7L_PONAB 60S ribosomal protein L7-like 1 OS=Pongo abelii GN=RPL7L1 PE=2 SV=1
Length = 246
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 23 LREIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGG 67
L++IF+G+F+K + M I + Y+T+G+PNLK+VRELI G
Sbjct: 112 LKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRG 156
>sp|A5GFQ0|RL7L_PIG 60S ribosomal protein L7-like 1 OS=Sus scrofa GN=RPL7L1 PE=3 SV=1
Length = 247
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 23 LREIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGG 67
L++IF+G+F++ TI I + Y+T+G+PNLK+VRELI G
Sbjct: 113 LKKIFSGVFMQVTPQTIKTLRIVEPYVTWGFPNLKSVRELILKRG 157
>sp|Q9D8M4|RL7L_MOUSE 60S ribosomal protein L7-like 1 OS=Mus musculus GN=Rpl7l1 PE=2 SV=1
Length = 246
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 23 LREIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGG 67
L+++F+G+F+K ++ M + Y+T+G+PNLK+VRELI G
Sbjct: 112 LKKLFSGVFVKVTPQSVRMLRTVEPYVTWGFPNLKSVRELILKRG 156
>sp|A0BD73|RL72_PARTE 60S ribosomal protein L7 2 OS=Paramecium tetraurelia GN=Rpl7-2 PE=3
SV=1
Length = 248
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 15 FNPKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
NP++++ LR ++ N F++ N TI M + Y+TYGYP+ ++ LIY GY
Sbjct: 101 LNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTYGYPSRAVIKNLIYKRGY 159
>sp|A0CEY2|RL71_PARTE 60S ribosomal protein L7 1 OS=Paramecium tetraurelia GN=Rpl7-1 PE=3
SV=1
Length = 248
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 15 FNPKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
NP++++ LR ++ N F++ N TI M + Y+TYGYP+ ++ LIY GY
Sbjct: 101 LNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTYGYPSRAVIKNLIYKRGY 159
>sp|Q755A7|RL7_ASHGO 60S ribosomal protein L7 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL7 PE=3 SV=1
Length = 243
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 17 PKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
PK +K+L+ +I +G+F+K T + + + Y+ YGYP+ +R+L+Y GY
Sbjct: 96 PKPRKVLQLLRLNQINSGVFVKVTKATTELLRLVEPYVAYGYPSYSTIRQLVYKRGY 152
>sp|Q6BTA4|RL7_DEBHA 60S ribosomal protein L7 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RPL7 PE=3 SV=1
Length = 241
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 17 PKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
PK +K+L+ +I G+F++ T + + + YI YGYPNL +R L+Y G+
Sbjct: 95 PKPRKVLQLLRLTQINAGVFVRLTKATSELLKLAEPYIAYGYPNLSTIRHLVYKRGH 151
>sp|P05737|RL7A_YEAST 60S ribosomal protein L7-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL7A PE=1 SV=3
Length = 244
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 17 PKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
PK +K+L+ I +G F+K T+ + + + Y+ YGYP+ +R+L+Y G+
Sbjct: 97 PKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGF 153
>sp|Q12213|RL7B_YEAST 60S ribosomal protein L7-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL7B PE=1 SV=3
Length = 244
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 17 PKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
PK +K+L+ I +G F+K T+ + + + Y+ YGYP+ +R+L+Y G+
Sbjct: 97 PKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGF 153
>sp|Q6FSN6|RL7_CANGA 60S ribosomal protein L7 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL7 PE=3
SV=1
Length = 244
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 17 PKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGY 68
PK +K+L+ +I +G F+K T + + + Y+ YGYP+ VR+L+Y G+
Sbjct: 97 PKPRKVLQLLRLTQINSGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQLVYKRGH 153
>sp|P0DJ13|RL7_TETTH 60S ribosomal protein L7 OS=Tetrahymena thermophila GN=RPL7 PE=1
SV=1
Length = 239
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 15 FNPKIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGYT 69
+P +K++LR ++ NG F + N +++M +IT+GYP + +LIY G+
Sbjct: 92 LHPDVKRVLRLFRLRQLHNGAFFRVNKASLNMIKRVLPFITFGYPTRNTISKLIYKRGFA 151
>sp|Q6FS36|RLP7_CANGA Ribosome biogenesis protein RLP7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RLP7 PE=3 SV=1
Length = 317
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 23 LREIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELI 63
L E+ +F+K TT + I Y+ G P+LK++R LI
Sbjct: 163 LEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLI 203
>sp|O66496|KDSA_AQUAE 2-dehydro-3-deoxyphosphooctonate aldolase OS=Aquifex aeolicus
(strain VF5) GN=kdsA PE=1 SV=1
Length = 267
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Query: 2 KEIGTITKSFKELFNPKIKKILREIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRE 61
+EI +++ FKE+ +F F KAN ++IH F H + YG L+ V+E
Sbjct: 24 EEIKRLSEKFKEV---------EFVFKSSFDKANRSSIHSFR--GHGLEYGVKALRKVKE 72
>sp|P32101|RLP7_CYBJA Ribosome biogenesis protein RLP7 (Fragment) OS=Cyberlindnera
jadinii GN=RLP7 PE=3 SV=1
Length = 212
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 18 KIKKILR-----EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELI 63
K++K+L+ +I +G+F+K T + + Y P+L+ VR+L+
Sbjct: 49 KVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLV 99
>sp|P32102|RLP7_KLULA Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RLP7 PE=3 SV=2
Length = 318
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 18 KIKKILR--EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELI 63
K+ +LR E+ G+F+K + + YI G P+L ++R LI
Sbjct: 157 KVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLI 204
>sp|Q4QQY7|TGT_XENLA Queuine tRNA-ribosyltransferase OS=Xenopus laevis GN=qtrt1 PE=2
SV=1
Length = 396
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 17 PKIKKILREIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGYTYFFLTFA 76
P ++ R N +F K++ +H HI H I Y +++VRE I G + F F
Sbjct: 314 PTCQRYSRSYINALF-KSDTAAMH--HITIHNIAYQLNLMRSVRESILQGRFPQFVQDFM 370
Query: 77 R 77
+
Sbjct: 371 K 371
>sp|Q28HC6|TGT_XENTR Queuine tRNA-ribosyltransferase OS=Xenopus tropicalis GN=qtrt1 PE=2
SV=2
Length = 396
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 17 PKIKKILREIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGGYTYFFLTFA 76
P ++ R N +F K++ +H HI H I Y +++VR+ I G + F F
Sbjct: 314 PTCQRYSRAYINALF-KSDTAAMH--HITIHNIAYQLNLMRSVRDSILQGRFPQFVQDFM 370
Query: 77 R 77
R
Sbjct: 371 R 371
>sp|P40693|RLP7_YEAST Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RLP7 PE=1 SV=1
Length = 322
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 18 KIKKILR--EIFNGIFLKANNTTIHMFHIFKHYITYGYPNLKNVRELIYMGG 67
KI +LR E G+F+K + + Y+ G P+L ++R LI G
Sbjct: 161 KILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRG 212
>sp|Q6BIF5|RLP7_DEBHA Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RLP7 PE=3 SV=2
Length = 275
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 29 GIFLKANNTTIHMFHIFKHYITYGYPNLKNVREL 62
G+F+K T+ + + YI G P+L ++R+L
Sbjct: 128 GVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKL 161
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.147 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,297,632
Number of Sequences: 539616
Number of extensions: 1055583
Number of successful extensions: 3430
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3392
Number of HSP's gapped (non-prelim): 43
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)