Query 047345
Match_columns 176
No_of_seqs 140 out of 936
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 10:13:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047345.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047345hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01614 PME_inhib pectineste 100.0 9.2E-34 2E-38 211.4 18.7 149 26-175 25-177 (178)
2 smart00856 PMEI Plant invertas 100.0 3.5E-32 7.5E-37 197.0 14.7 142 29-171 3-148 (148)
3 PF04043 PMEI: Plant invertase 100.0 4.4E-30 9.5E-35 186.5 14.8 142 29-171 3-152 (152)
4 PLN02314 pectinesterase 100.0 9.7E-28 2.1E-32 205.6 19.3 146 29-175 69-233 (586)
5 PLN02468 putative pectinestera 100.0 1.3E-27 2.8E-32 204.0 18.1 146 29-175 63-216 (565)
6 PLN02484 probable pectinestera 100.0 1.7E-27 3.6E-32 203.8 17.8 146 29-175 72-226 (587)
7 PLN02708 Probable pectinestera 100.0 2.1E-27 4.6E-32 202.2 18.3 146 28-174 42-194 (553)
8 PLN02995 Probable pectinestera 100.0 4.9E-27 1.1E-31 199.3 17.4 145 30-175 34-190 (539)
9 PLN02313 Pectinesterase/pectin 99.9 1.9E-26 4.1E-31 197.6 17.6 146 29-175 58-219 (587)
10 PLN02301 pectinesterase/pectin 99.9 4.4E-26 9.5E-31 193.4 16.7 147 28-175 48-200 (548)
11 PLN02217 probable pectinestera 99.9 2.4E-25 5.1E-30 191.8 18.1 144 30-175 53-207 (670)
12 PLN02506 putative pectinestera 99.9 2.5E-25 5.5E-30 188.6 16.7 147 28-175 32-191 (537)
13 PLN02990 Probable pectinestera 99.9 4.3E-25 9.4E-30 188.6 18.3 144 29-175 52-209 (572)
14 PLN02713 Probable pectinestera 99.9 1.3E-25 2.8E-30 191.5 15.1 144 27-174 29-188 (566)
15 PLN02745 Putative pectinestera 99.9 4.9E-25 1.1E-29 188.8 18.1 143 30-175 79-231 (596)
16 PLN02197 pectinesterase 99.9 1.1E-24 2.3E-29 186.1 17.0 141 31-175 39-190 (588)
17 PLN02416 probable pectinestera 99.9 1.3E-24 2.8E-29 184.7 16.2 147 28-175 36-191 (541)
18 PLN02698 Probable pectinestera 99.9 2.7E-24 5.8E-29 181.3 14.9 145 26-175 18-176 (497)
19 PLN03043 Probable pectinestera 99.9 5.1E-23 1.1E-27 175.0 14.7 139 34-174 3-156 (538)
20 PLN02201 probable pectinestera 99.8 8.2E-19 1.8E-23 148.4 14.8 113 61-174 37-162 (520)
21 PLN02933 Probable pectinestera 99.8 3.7E-18 8.1E-23 144.4 15.7 116 59-175 49-181 (530)
22 PLN02488 probable pectinestera 99.8 5.3E-18 1.1E-22 142.1 11.9 140 35-175 3-159 (509)
23 PLN02170 probable pectinestera 99.6 4.5E-15 9.7E-20 125.5 11.4 120 41-175 58-184 (529)
24 PLN02916 pectinesterase family 99.5 1.2E-13 2.6E-18 116.4 9.2 85 90-175 56-140 (502)
25 TIGR00208 fliS flagellar biosy 65.9 42 0.00091 23.3 7.8 36 104-140 26-61 (124)
26 PF07870 DUF1657: Protein of u 62.7 28 0.00061 20.2 6.6 44 71-115 4-47 (50)
27 PRK05685 fliS flagellar protei 49.0 90 0.002 21.8 8.9 23 59-81 22-44 (132)
28 PF02561 FliS: Flagellar prote 46.9 92 0.002 21.3 8.1 26 58-83 15-40 (122)
29 PF08285 DPM3: Dolichol-phosph 45.8 14 0.0003 24.4 1.4 27 98-125 62-88 (91)
30 KOG4841 Dolichol-phosphate man 42.4 19 0.00041 23.5 1.6 26 98-124 66-91 (95)
31 COG1516 FliS Flagellin-specifi 41.1 69 0.0015 22.7 4.5 37 103-140 25-61 (132)
32 KOG1155 Anaphase-promoting com 35.5 2.4E+02 0.0052 24.7 7.5 55 92-146 482-543 (559)
33 TIGR03504 FimV_Cterm FimV C-te 33.4 74 0.0016 17.8 3.0 25 114-138 3-27 (44)
34 PF02953 zf-Tim10_DDP: Tim10/D 31.3 1.2E+02 0.0026 18.1 4.3 28 91-119 37-64 (66)
35 KOG1733 Mitochondrial import i 30.8 1.6E+02 0.0035 19.4 6.9 52 66-118 25-84 (97)
36 PRK09634 nusB transcription an 29.4 2.4E+02 0.0052 21.6 6.1 89 60-149 29-136 (207)
37 PF14346 DUF4398: Domain of un 26.5 1.9E+02 0.0042 18.9 4.8 35 105-140 41-75 (103)
38 PF10360 DUF2433: Protein of u 25.4 96 0.0021 22.0 3.1 20 157-176 45-64 (132)
39 KOG4514 Uncharacterized conser 25.4 3E+02 0.0065 20.8 6.4 65 56-126 119-185 (222)
40 PF02609 Exonuc_VII_S: Exonucl 24.7 1.5E+02 0.0032 17.1 5.0 41 106-147 1-43 (53)
41 KOG2003 TPR repeat-containing 24.6 4.6E+02 0.01 23.1 7.4 26 123-148 503-528 (840)
42 PF08287 DASH_Spc19: Spc19; I 23.0 1.9E+02 0.0041 21.0 4.3 25 99-124 2-26 (153)
43 PRK09591 celC cellobiose phosp 22.7 1.8E+02 0.0039 19.6 3.9 21 113-133 23-43 (104)
44 cd00215 PTS_IIA_lac PTS_IIA, P 22.7 1.8E+02 0.004 19.2 3.9 21 113-133 18-38 (97)
45 KOG3470 Beta-tubulin folding c 20.4 2.9E+02 0.0063 18.8 7.8 50 72-122 25-78 (107)
46 cd02337 ZZ_CBP Zinc finger, ZZ 20.4 56 0.0012 18.0 0.9 21 33-53 12-32 (41)
No 1
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=9.2e-34 Score=211.42 Aligned_cols=149 Identities=33% Similarity=0.518 Sum_probs=139.9
Q ss_pred ccchhhHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 047345 26 SKIKTRLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEE 105 (176)
Q Consensus 26 ~~~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~ 105 (176)
..++...|+.+|++|+||++|+++|.++|++..+|+++|+.++++.+..+++++..++.++.++.+++..+.++++|.+.
T Consensus 25 ~~~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~al~~C~~~ 104 (178)
T TIGR01614 25 LNATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTLDHISKLLLTKGDPRDKSALEDCVEL 104 (178)
T ss_pred CcchHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHH
Confidence 35677899999999999999999999999988889999999999999999999999999998776688999999999999
Q ss_pred HHHHHHhhHHHHHHHHhCCChhhHHHHHHHHHhcHhHHHhhcCC----CCCchhHhhHHHHHHHHHHHHHHHhh
Q 047345 106 YRAIVERQIPEAIDALQSGDYMVSKKDAEAAAAHADSCEEQFAG----ETQPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 106 y~~a~~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d~f~~----~~~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
|+.++ ++|+++++.++.++|+++++|+++|++++++|+|||.+ .++|+..+++++.+|++|+++|+++|
T Consensus 105 y~~a~-~~L~~a~~~l~~~~~~d~~~~ls~a~~~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 105 YSDAV-DALDKALASLKSKDYSDAETWLSSALTDPSTCEDGFEELGGIVKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred HHHHH-HHHHHHHHHHHhcchhHHHHHHHHHHcccchHHHHhccCCCCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999 59999999999999999999999999999999999994 25789999999999999999999886
No 2
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=100.00 E-value=3.5e-32 Score=196.98 Aligned_cols=142 Identities=33% Similarity=0.544 Sum_probs=133.8
Q ss_pred hhhHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHH
Q 047345 29 KTRLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEYRA 108 (176)
Q Consensus 29 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~ 108 (176)
....|+.+|++|+||++|+++|.++|++..+|+++|+.++++.++.++..+..+++++.++.+++..+.+|++|.++|+.
T Consensus 3 ~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~~C~~~y~~ 82 (148)
T smart00856 3 TSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLKKTKDPRLKAALKDCLELYDD 82 (148)
T ss_pred HHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999987789999999999999999999999999998777789999999999999999
Q ss_pred HHHhhHHHHHHHHhCCChhhHHHHHHHHHhcHhHHHhhcCC----CCCchhHhhHHHHHHHHHHHHH
Q 047345 109 IVERQIPEAIDALQSGDYMVSKKDAEAAAAHADSCEEQFAG----ETQPFSDQNKAVHGLSLVTSSI 171 (176)
Q Consensus 109 a~~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d~f~~----~~~pl~~~~~~~~~l~~ial~i 171 (176)
++ ++|++++..+..++|+++++|+|+|++++++|+|||.+ .++||..++.++.+|++|+|+|
T Consensus 83 a~-~~L~~a~~~l~~~~~~d~~~~lsaa~t~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 83 AV-DSLEKALEELKSGDYDDVATWLSAALTDQDTCLDGFEENDDKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HH-HHHHHHHHHHHhcchhHHHHHHHHHhcCcchHHhHhccCCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 99 59999999999999999999999999999999999985 2578999999999999999986
No 3
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.97 E-value=4.4e-30 Score=186.46 Aligned_cols=142 Identities=35% Similarity=0.529 Sum_probs=127.5
Q ss_pred hhhHHHHHhcCCCCcc-hhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCHHHHHHHHHHHHHH
Q 047345 29 KTRLIKETCKHTEYYN-LCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKK-VSDPALYRFYGTCIEEY 106 (176)
Q Consensus 29 ~~~~i~~~C~~t~~~~-~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~-~~~~~~~~al~~C~~~y 106 (176)
....|+++|++|+||. +|.++|++++.++..|+++|+.++++.+..++..+..+++++.+. .+++..+.+|++|.++|
T Consensus 3 ~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~~y 82 (152)
T PF04043_consen 3 TSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQELY 82 (152)
T ss_dssp -HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHHHH
Confidence 4579999999999766 999999999777777999999999999999999999999999987 78999999999999999
Q ss_pred HHHHHhhHHHHHHHH--hCCChhhHHHHHHHHHhcHhHHHhhcC--C--CCCchhHhhHHHHHHHHHHHHH
Q 047345 107 RAIVERQIPEAIDAL--QSGDYMVSKKDAEAAAAHADSCEEQFA--G--ETQPFSDQNKAVHGLSLVTSSI 171 (176)
Q Consensus 107 ~~a~~~~L~~a~~~l--~~~~~~~~~~~lsaa~~~~~tC~d~f~--~--~~~pl~~~~~~~~~l~~ial~i 171 (176)
+.++ ++|++++..+ ..++|+++++|+++|++++++|+++|. + .++||..++.++.+|++|+|+|
T Consensus 83 ~~a~-~~l~~a~~~l~~~~~~~~~~~~~lsaa~~~~~tC~~~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 152 (152)
T PF04043_consen 83 DDAV-DSLQRALEALNSKNGDYDDARTWLSAALTNQDTCEDGFEEAGSPVKSPLVQRNDNVEKLSSNALAI 152 (152)
T ss_dssp HHHH-HHHHHHHHHH--HHT-HHHHHHHHHHHHHHHHHHHHHC-TTSSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHHHHhhC
Confidence 9999 5999999999 999999999999999999999999993 2 3678999999999999999997
No 4
>PLN02314 pectinesterase
Probab=99.96 E-value=9.7e-28 Score=205.62 Aligned_cols=146 Identities=14% Similarity=0.212 Sum_probs=129.0
Q ss_pred hhhHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHH
Q 047345 29 KTRLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEYRA 108 (176)
Q Consensus 29 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~ 108 (176)
....|+.+|+.|.||++|+++|.++|.+..+++++|+.++++++++++..+...+++|.+...+++.+.+|+||.++|++
T Consensus 69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~~~~~~~k~AL~DC~Elldd 148 (586)
T PLN02314 69 PATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINETNDERLKSALRVCETLFDD 148 (586)
T ss_pred HHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 45699999999999999999999999877789999999999999999999999999987656788999999999999999
Q ss_pred HHHhhHHHHHHHHhC---------CChhhHHHHHHHHHhcHhHHHhhcCCC------CCch----hHhhHHHHHHHHHHH
Q 047345 109 IVERQIPEAIDALQS---------GDYMVSKKDAEAAAAHADSCEEQFAGE------TQPF----SDQNKAVHGLSLVTS 169 (176)
Q Consensus 109 a~~~~L~~a~~~l~~---------~~~~~~~~~lsaa~~~~~tC~d~f~~~------~~pl----~~~~~~~~~l~~ial 169 (176)
++ ++|++++..+.. ..++|+++|||+|+++++||+|||++. .+++ .....++.+|++|+|
T Consensus 149 Ai-d~L~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNaL 227 (586)
T PLN02314 149 AI-DRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNSL 227 (586)
T ss_pred HH-HHHHHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99 599999998853 246899999999999999999999732 3344 444589999999999
Q ss_pred HHHHhh
Q 047345 170 SILGIL 175 (176)
Q Consensus 170 ~i~~~l 175 (176)
+|++.+
T Consensus 228 AIi~~l 233 (586)
T PLN02314 228 AIVSKI 233 (586)
T ss_pred HHHhhh
Confidence 999875
No 5
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=1.3e-27 Score=203.98 Aligned_cols=146 Identities=14% Similarity=0.145 Sum_probs=131.3
Q ss_pred hhhHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCCHHHHHHHHHHHHHH
Q 047345 29 KTRLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKK--VSDPALYRFYGTCIEEY 106 (176)
Q Consensus 29 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~--~~~~~~~~al~~C~~~y 106 (176)
.+..|+..|+.|.||++|+++|.++|.+...++++|+.+++++++.++.++...+.++... ..+++.+.||+||.++|
T Consensus 63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELl 142 (565)
T PLN02468 63 ISTSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELL 142 (565)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHH
Confidence 3468999999999999999999999987677999999999999999999999888777643 45889999999999999
Q ss_pred HHHHHhhHHHHHHHHh----CCChhhHHHHHHHHHhcHhHHHhhcCC--CCCchhHhhHHHHHHHHHHHHHHHhh
Q 047345 107 RAIVERQIPEAIDALQ----SGDYMVSKKDAEAAAAHADSCEEQFAG--ETQPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 107 ~~a~~~~L~~a~~~l~----~~~~~~~~~~lsaa~~~~~tC~d~f~~--~~~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
++++ ++|++++.++. ...++|+++|||+|+++++||.|||++ .+++|.....++.+|++|+|+|++.+
T Consensus 143 ddai-d~L~~Sl~~l~~~~~~~~~dDl~TWLSAAlTnq~TClDGF~e~~vk~~~~~~l~n~~eLtSNaLAIi~~l 216 (565)
T PLN02468 143 DLAI-DNLNNSLTSSGGVSVLDNVDDLRTWLSSAGTYQETCIDGLAEPNLKSFGENHLKNSTELTSNSLAIITWI 216 (565)
T ss_pred HHHH-HHHHHHHHHHhccccccchHHHHHHHHHHhcchhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999 59999999887 345689999999999999999999974 46789999999999999999999875
No 6
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=1.7e-27 Score=203.85 Aligned_cols=146 Identities=24% Similarity=0.326 Sum_probs=129.5
Q ss_pred hhhHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHH
Q 047345 29 KTRLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEYRA 108 (176)
Q Consensus 29 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~ 108 (176)
.+..|+.+|+.|.||++|+++|.++|.+..+++++|+.+++++++.++..+......+.....+++.+.||+||.++|++
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~~~~~~r~k~AL~DClELldd 151 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISYVQMPPRVRSAYDSCLELLDD 151 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Confidence 45689999999999999999999999877789999999999999999998877665554345688999999999999999
Q ss_pred HHHhhHHHHHHHHhC----CChhhHHHHHHHHHhcHhHHHhhcCC-----CCCchhHhhHHHHHHHHHHHHHHHhh
Q 047345 109 IVERQIPEAIDALQS----GDYMVSKKDAEAAAAHADSCEEQFAG-----ETQPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 109 a~~~~L~~a~~~l~~----~~~~~~~~~lsaa~~~~~tC~d~f~~-----~~~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
++ ++|++++..+.. ..++|+++|||+|+++++||+|||++ .+++|...+.++.+|++|+|+|++.+
T Consensus 152 Ai-d~L~~Sl~~l~~~~~~~~~~DvkTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi~~~ 226 (587)
T PLN02484 152 SV-DALSRALSSVVPSSGGGSPQDVVTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIFSAS 226 (587)
T ss_pred HH-HHHHHHHHHHhccccccchHHHHhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99 599999999874 35789999999999999999999973 25679999999999999999999875
No 7
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=2.1e-27 Score=202.19 Aligned_cols=146 Identities=14% Similarity=0.140 Sum_probs=125.7
Q ss_pred chhhHHHHHhcCCCCcchhhhhcccCCCC-ccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCHHHHHHHHHHHHH
Q 047345 28 IKTRLIKETCKHTEYYNLCVASLESDPRS-LNADVKELAIILVELLQAKANETLWHVGDLFKK-VSDPALYRFYGTCIEE 105 (176)
Q Consensus 28 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~s-~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~-~~~~~~~~al~~C~~~ 105 (176)
.+...|+..|+.|+||++|+++|.+++.. ...++.+++..++++++.++..+...++.+.+. ..+...+.+++||.|+
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC~EL 121 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNCLEV 121 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHH
Confidence 45678999999999999999999998853 445899999999999999999999999988764 2344445899999999
Q ss_pred HHHHHHhhHHHHHHHHhCCChhhHHHHHHHHHhcHhHHHhhcCCCC--Cchh---HhhHHHHHHHHHHHHHHHh
Q 047345 106 YRAIVERQIPEAIDALQSGDYMVSKKDAEAAAAHADSCEEQFAGET--QPFS---DQNKAVHGLSLVTSSILGI 174 (176)
Q Consensus 106 y~~a~~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d~f~~~~--~pl~---~~~~~~~~l~~ial~i~~~ 174 (176)
|++++ ++|++++..+....++|+++|||+|++|++||.|||.+.. ..+. ...+++.+|++|+|+|++.
T Consensus 122 lddav-d~L~~Sl~~L~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~~~L~nvs~LtSNSLAmv~~ 194 (553)
T PLN02708 122 LSNSE-HRISSTDIALPRGKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTMSFLDSLIGLTSNALSMMAS 194 (553)
T ss_pred HHHHH-HHHHHHHHHhhhcchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999 5999999999888899999999999999999999997431 2233 5678999999999999985
No 8
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=4.9e-27 Score=199.28 Aligned_cols=145 Identities=15% Similarity=0.212 Sum_probs=123.9
Q ss_pred hhHHHHHhcCCCCcchhhhhcccCCCCcc-CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHH
Q 047345 30 TRLIKETCKHTEYYNLCVASLESDPRSLN-ADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEYRA 108 (176)
Q Consensus 30 ~~~i~~~C~~t~~~~~C~~~L~~~p~s~~-ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~ 108 (176)
...|+..|+.|.||++|+++|.++|.+.. +++.+++.++++.++.++.++...+.++.+...+++.+.+++||.|+|++
T Consensus 34 ~~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~~~~~~~r~~~AL~DC~ELl~D 113 (539)
T PLN02995 34 STDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTNSGKNCTDFKKQAVLADCIDLYGD 113 (539)
T ss_pred hHHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHH
Confidence 34899999999999999999999887644 48999999999999999999999999886655688899999999999999
Q ss_pred HHHhhHHHHHHHHhCC-------ChhhHHHHHHHHHhcHhHHHhhcCCC--CCchhHh--hHHHHHHHHHHHHHHHhh
Q 047345 109 IVERQIPEAIDALQSG-------DYMVSKKDAEAAAAHADSCEEQFAGE--TQPFSDQ--NKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 109 a~~~~L~~a~~~l~~~-------~~~~~~~~lsaa~~~~~tC~d~f~~~--~~pl~~~--~~~~~~l~~ial~i~~~l 175 (176)
++ ++|++++.+++.. .++|+++|||+|+++++||.|||++. +..+... +.++.+|++|+|+|++.+
T Consensus 114 Av-D~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~v~~~v~~~~~~~ltSNaLAi~~~l 190 (539)
T PLN02995 114 TI-MQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLNVSDFITPIVSNTKISHLISNCLAVNGAL 190 (539)
T ss_pred HH-HHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhhhhhhccccchhhhhhhhhhhhHHHHHHHHHHHhhhh
Confidence 99 5999999998632 45799999999999999999999852 2223323 367999999999999875
No 9
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=1.9e-26 Score=197.58 Aligned_cols=146 Identities=15% Similarity=0.218 Sum_probs=129.2
Q ss_pred hhhHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCCHHHHHHHHHHHHHH
Q 047345 29 KTRLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKK--VSDPALYRFYGTCIEEY 106 (176)
Q Consensus 29 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~--~~~~~~~~al~~C~~~y 106 (176)
.+..|+.+|+.|.||++|+++|.+.|.+...++++|+.+++++++.++..+...++++.+. ..+++.+.||+||.|+|
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELl 137 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETI 137 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999998876667999999999999999999999999988753 46888999999999999
Q ss_pred HHHHHhhHHHHHHHHhC--------CChhhHHHHHHHHHhcHhHHHhhcCC------CCCchhHhhHHHHHHHHHHHHHH
Q 047345 107 RAIVERQIPEAIDALQS--------GDYMVSKKDAEAAAAHADSCEEQFAG------ETQPFSDQNKAVHGLSLVTSSIL 172 (176)
Q Consensus 107 ~~a~~~~L~~a~~~l~~--------~~~~~~~~~lsaa~~~~~tC~d~f~~------~~~pl~~~~~~~~~l~~ial~i~ 172 (176)
++++ ++|++++..+.. ..++|+++|||+|++|++||.|||++ .+.+|.....++.+|++|+|+|+
T Consensus 138 ddav-D~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv 216 (587)
T PLN02313 138 DETL-DELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMI 216 (587)
T ss_pred HHHH-HHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 599999998873 23589999999999999999999972 14567788899999999999999
Q ss_pred Hhh
Q 047345 173 GIL 175 (176)
Q Consensus 173 ~~l 175 (176)
+.+
T Consensus 217 ~~~ 219 (587)
T PLN02313 217 KNM 219 (587)
T ss_pred hcc
Confidence 864
No 10
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.94 E-value=4.4e-26 Score=193.43 Aligned_cols=147 Identities=14% Similarity=0.199 Sum_probs=130.4
Q ss_pred chhhHHHHHhcCCCCcchhhhhcccCCCC--ccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 047345 28 IKTRLIKETCKHTEYYNLCVASLESDPRS--LNADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEE 105 (176)
Q Consensus 28 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~s--~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~ 105 (176)
.+.+.|+..|+.|+||++|+++|.+.+.+ ...++.+|+..+++.++.++..+...++.+.+...+++.+.+++||.++
T Consensus 48 ~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~~~~~~~~~aAL~DC~EL 127 (548)
T PLN02301 48 SPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRIRINDPRDKAALADCVEL 127 (548)
T ss_pred CchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 34568999999999999999999988753 2348999999999999999999999999886556788999999999999
Q ss_pred HHHHHHhhHHHHHHHHhC---CChhhHHHHHHHHHhcHhHHHhhcCCC-CCchhHhhHHHHHHHHHHHHHHHhh
Q 047345 106 YRAIVERQIPEAIDALQS---GDYMVSKKDAEAAAAHADSCEEQFAGE-TQPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 106 y~~a~~~~L~~a~~~l~~---~~~~~~~~~lsaa~~~~~tC~d~f~~~-~~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
|++++ ++|++++.+++. ++++|+++|||+|+++++||.|||.+. +++|...++++.+|++|+|+|++.+
T Consensus 128 l~dav-d~L~~Sl~~l~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~~~~~l~n~~qL~SNsLAiv~~l 200 (548)
T PLN02301 128 MDLSK-DRIKDSVEALGNVTSKSHADAHTWLSSVLTNHVTCLDGINGPSRQSMKPGLKDLISRARTSLAILVSV 200 (548)
T ss_pred HHHHH-HHHHHHHHHhhcccccchHHHHHHHHHHhcchhhHHhhhhhhhhhhHHHHHHHHHHHHHHHHHhhccc
Confidence 99999 599999888763 357899999999999999999999853 5789999999999999999999864
No 11
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=99.94 E-value=2.4e-25 Score=191.84 Aligned_cols=144 Identities=16% Similarity=0.248 Sum_probs=125.7
Q ss_pred hhHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHH
Q 047345 30 TRLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEYRAI 109 (176)
Q Consensus 30 ~~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~a 109 (176)
...|+..|+.|.||++|+++|.+++ ....++++|+..++++++.++..+...++++.+...+++.+.|++||+++|+++
T Consensus 53 ~~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~~~~~~r~k~AL~DClELlddA 131 (670)
T PLN02217 53 VKAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIELQKDPRTKMALDQCKELMDYA 131 (670)
T ss_pred HHHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHH
Confidence 3489999999999999999999987 445699999999999999999999999988855456889999999999999999
Q ss_pred HHhhHHHHHHHHhCC-------ChhhHHHHHHHHHhcHhHHHhhcCCC----CCchhHhhHHHHHHHHHHHHHHHhh
Q 047345 110 VERQIPEAIDALQSG-------DYMVSKKDAEAAAAHADSCEEQFAGE----TQPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 110 ~~~~L~~a~~~l~~~-------~~~~~~~~lsaa~~~~~tC~d~f~~~----~~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
+ ++|++++..+... ..+|+++|||+|++|++||.|||++. +..|.....++.+|++|+|+|++.+
T Consensus 132 v-DeL~~Sl~~L~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~~~vk~~m~~~l~nvseLtSNALAmv~~l 207 (670)
T PLN02217 132 I-GELSKSFEELGKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVSEM 207 (670)
T ss_pred H-HHHHHHHHHHhhccccccccchhHHHHHHHHHHhchhHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9 5999999998621 24789999999999999999999742 3346677889999999999999864
No 12
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=2.5e-25 Score=188.60 Aligned_cols=147 Identities=16% Similarity=0.119 Sum_probs=126.7
Q ss_pred chhhHHHHHhcCCCCcchhhhhcccCCC-CccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 047345 28 IKTRLIKETCKHTEYYNLCVASLESDPR-SLNADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEY 106 (176)
Q Consensus 28 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~-s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y 106 (176)
.....|+..|+.|+||++|+++|.+... +...++++|+.+++++++.++..+...+..+.+...+++.+.+++||.|+|
T Consensus 32 ~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~~~~~r~~~Al~DC~Ell 111 (537)
T PLN02506 32 NFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNALSISYREQVAIEDCKELL 111 (537)
T ss_pred hHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 4466999999999999999999998643 334689999999999999999999999998865566889999999999999
Q ss_pred HHHHHhhHHHHHHHHhC----CC----hhhHHHHHHHHHhcHhHHHhhcCCC----CCchhHhhHHHHHHHHHHHHHHHh
Q 047345 107 RAIVERQIPEAIDALQS----GD----YMVSKKDAEAAAAHADSCEEQFAGE----TQPFSDQNKAVHGLSLVTSSILGI 174 (176)
Q Consensus 107 ~~a~~~~L~~a~~~l~~----~~----~~~~~~~lsaa~~~~~tC~d~f~~~----~~pl~~~~~~~~~l~~ial~i~~~ 174 (176)
++++ ++|.+++.+++. ++ .+|+++|||+|+++++||.|||++. +..+.....++.+|++|+|+|++.
T Consensus 112 ddSv-d~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~k~~v~~~l~nv~~LtSNALAiv~~ 190 (537)
T PLN02506 112 DFSV-SELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDRHLENFIKGSLKQVTQLISNVLAMYTQ 190 (537)
T ss_pred HHHH-HHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999 599999988852 12 3799999999999999999999842 345777789999999999999975
Q ss_pred h
Q 047345 175 L 175 (176)
Q Consensus 175 l 175 (176)
+
T Consensus 191 l 191 (537)
T PLN02506 191 L 191 (537)
T ss_pred c
Confidence 4
No 13
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=4.3e-25 Score=188.55 Aligned_cols=144 Identities=15% Similarity=0.204 Sum_probs=123.4
Q ss_pred hhhHHHHHhcCCCCcchhhhhccc-CCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCCHHHHHHHHHHHHH
Q 047345 29 KTRLIKETCKHTEYYNLCVASLES-DPRSLNADVKELAIILVELLQAKANETLWHVGDLFKK--VSDPALYRFYGTCIEE 105 (176)
Q Consensus 29 ~~~~i~~~C~~t~~~~~C~~~L~~-~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~--~~~~~~~~al~~C~~~ 105 (176)
.+..|+..|+.|.||++|.++|.+ .|. ..++++|+..++++++.++..+...+.++... ..+++.+.|++||+|+
T Consensus 52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~EL 129 (572)
T PLN02990 52 TTKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKL 129 (572)
T ss_pred hhHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHH
Confidence 445899999999999999999998 443 35899999999999999999999988777532 5788999999999999
Q ss_pred HHHHHHhhHHHHHHHHhCC-------ChhhHHHHHHHHHhcHhHHHhhcCCCCC----chhHhhHHHHHHHHHHHHHHHh
Q 047345 106 YRAIVERQIPEAIDALQSG-------DYMVSKKDAEAAAAHADSCEEQFAGETQ----PFSDQNKAVHGLSLVTSSILGI 174 (176)
Q Consensus 106 y~~a~~~~L~~a~~~l~~~-------~~~~~~~~lsaa~~~~~tC~d~f~~~~~----pl~~~~~~~~~l~~ial~i~~~ 174 (176)
|++++ ++|++++..++.. .++|+++|||+|+++++||.|||++..+ .+.....++.+|++|+|+|++.
T Consensus 130 lddAv-deL~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~s~lk~~~~~~l~nv~~LtSNALAiv~~ 208 (572)
T PLN02990 130 MNDAT-DDLKKCLDNFDGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMITN 208 (572)
T ss_pred HHHHH-HHHHHHHHHHhhcccccccchhHHHHHHHHHHhccHhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999 5999999998732 2689999999999999999999985333 3555667889999999999986
Q ss_pred h
Q 047345 175 L 175 (176)
Q Consensus 175 l 175 (176)
+
T Consensus 209 ~ 209 (572)
T PLN02990 209 I 209 (572)
T ss_pred h
Confidence 4
No 14
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=1.3e-25 Score=191.53 Aligned_cols=144 Identities=11% Similarity=0.081 Sum_probs=124.8
Q ss_pred cchhhHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-C--CCHHHHHHHHHHH
Q 047345 27 KIKTRLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKK-V--SDPALYRFYGTCI 103 (176)
Q Consensus 27 ~~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~-~--~~~~~~~al~~C~ 103 (176)
|.....+...|+.|+||++|+++|.+. ...++++++.++++.++.++..+...++++.+. . .+++.+.||+||+
T Consensus 29 ~~~~~~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k~AL~DC~ 105 (566)
T PLN02713 29 PSTPVSPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRALEDCQ 105 (566)
T ss_pred cCCCCCCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHH
Confidence 466778899999999999999999762 235899999999999999999999999988765 2 3889999999999
Q ss_pred HHHHHHHHhhHHHHHHHHhC-------CChhhHHHHHHHHHhcHhHHHhhcCCC------CCchhHhhHHHHHHHHHHHH
Q 047345 104 EEYRAIVERQIPEAIDALQS-------GDYMVSKKDAEAAAAHADSCEEQFAGE------TQPFSDQNKAVHGLSLVTSS 170 (176)
Q Consensus 104 ~~y~~a~~~~L~~a~~~l~~-------~~~~~~~~~lsaa~~~~~tC~d~f~~~------~~pl~~~~~~~~~l~~ial~ 170 (176)
|+|++++ ++|.+++.+++. ..++|+++|||+|++|++||.|||.+. +..|.....++.+|++|+|+
T Consensus 106 ELlddav-D~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNaLA 184 (566)
T PLN02713 106 FLAGLNI-DFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVSLA 184 (566)
T ss_pred HHHHHHH-HHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 599999999873 246899999999999999999999853 22366777899999999999
Q ss_pred HHHh
Q 047345 171 ILGI 174 (176)
Q Consensus 171 i~~~ 174 (176)
|++.
T Consensus 185 lv~~ 188 (566)
T PLN02713 185 LFTK 188 (566)
T ss_pred Hhcc
Confidence 9975
No 15
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=4.9e-25 Score=188.82 Aligned_cols=143 Identities=14% Similarity=0.198 Sum_probs=126.5
Q ss_pred hhHHHHHhcCCCCcchhhhhcccCCC--CccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHH
Q 047345 30 TRLIKETCKHTEYYNLCVASLESDPR--SLNADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEYR 107 (176)
Q Consensus 30 ~~~i~~~C~~t~~~~~C~~~L~~~p~--s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~ 107 (176)
...|+.+|+.|.||+.|.++|.++.. +...++++|+.++++.+..++..+...+.++. ..+++.+.|++||.++|+
T Consensus 79 ~~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~--~~~~r~k~Al~DC~ELld 156 (596)
T PLN02745 79 DKIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK--FENPDEKDAIEDCKLLVE 156 (596)
T ss_pred HHHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCHHHHHHHHHHHHHHH
Confidence 56899999999999999999998643 23468999999999999999999988887764 367899999999999999
Q ss_pred HHHHhhHHHHHHHHhC------CChhhHHHHHHHHHhcHhHHHhhcCC--CCCchhHhhHHHHHHHHHHHHHHHhh
Q 047345 108 AIVERQIPEAIDALQS------GDYMVSKKDAEAAAAHADSCEEQFAG--ETQPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 108 ~a~~~~L~~a~~~l~~------~~~~~~~~~lsaa~~~~~tC~d~f~~--~~~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
+++ ++|++++..+.. ..++|+++|||+|+++++||.|||++ .+++|.....++.+|++|+|+|++.+
T Consensus 157 dAi-d~L~~Sl~~l~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~l~s~m~~~l~~~~eLtSNALAiv~~l 231 (596)
T PLN02745 157 DAK-EELKASISRINDEVNKLAKNVPDLNNWLSAVMSYQETCIDGFPEGKLKSEMEKTFKSSQELTSNSLAMVSSL 231 (596)
T ss_pred HHH-HHHHHHHHHHhhcccccccchHHHHHHHHHHhccHhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999 599999999863 34689999999999999999999984 46789999999999999999999864
No 16
>PLN02197 pectinesterase
Probab=99.93 E-value=1.1e-24 Score=186.14 Aligned_cols=141 Identities=11% Similarity=0.151 Sum_probs=123.7
Q ss_pred hHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhh---hcCCCHHHHHHHHHHHHHHH
Q 047345 31 RLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLF---KKVSDPALYRFYGTCIEEYR 107 (176)
Q Consensus 31 ~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~---~~~~~~~~~~al~~C~~~y~ 107 (176)
..|+.+|+.|.||++|.++|.+.+ ..++++|+..++++++.++..+...+..+. .+..+++.+.|++||.++|+
T Consensus 39 k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~eLl~ 115 (588)
T PLN02197 39 KAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKRVFM 115 (588)
T ss_pred HHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Confidence 389999999999999999999987 348999999999999999999999888664 12458899999999999999
Q ss_pred HHHHhhHHHHHHHHhC------CChhhHHHHHHHHHhcHhHHHhhcCCC--CCchhHhhHHHHHHHHHHHHHHHhh
Q 047345 108 AIVERQIPEAIDALQS------GDYMVSKKDAEAAAAHADSCEEQFAGE--TQPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 108 ~a~~~~L~~a~~~l~~------~~~~~~~~~lsaa~~~~~tC~d~f~~~--~~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
++++ +|++++.+++. ...+|+++|||+|++|++||.|||.+. +..+.....++.+|++|+|+|++.+
T Consensus 116 davd-~L~~Sl~~l~~~~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~k~~v~~~l~nv~~LtSNaLAiv~~l 190 (588)
T PLN02197 116 YALE-DLSTIVEEMGEDLNQIGSKIDQLKQWLTGVYNYQTDCLDDIEEDDLRKTIGEGIANSKILTSNAIDIFHSV 190 (588)
T ss_pred HHHH-HHHHHHHHHhhcccccccchhhHHHHHHHHHhChhhhhccccCcchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9994 99999999872 235799999999999999999999852 4457777899999999999999864
No 17
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=1.3e-24 Score=184.67 Aligned_cols=147 Identities=13% Similarity=0.116 Sum_probs=124.8
Q ss_pred chhhHHHHHhcCCCCcchhhhhcccCCCCc-cCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCHHHHHHHHHHHHH
Q 047345 28 IKTRLIKETCKHTEYYNLCVASLESDPRSL-NADVKELAIILVELLQAKANETLWHVGDLFKK-VSDPALYRFYGTCIEE 105 (176)
Q Consensus 28 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~-~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~-~~~~~~~~al~~C~~~ 105 (176)
+..+.|+.+|+.|+||++|+++|.+++... ..++.+++.++++.+...+..+...++.+... ..+++.+.+++||.|+
T Consensus 36 ~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~~~~~~~~k~AL~DC~El 115 (541)
T PLN02416 36 PHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQRGTIQDCKEL 115 (541)
T ss_pred hHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHH
Confidence 345689999999999999999999987533 34788899999999998888888777665433 3467889999999999
Q ss_pred HHHHHHhhHHHHHHHHhCC---ChhhHHHHHHHHHhcHhHHHhhcCC----CCCchhHhhHHHHHHHHHHHHHHHhh
Q 047345 106 YRAIVERQIPEAIDALQSG---DYMVSKKDAEAAAAHADSCEEQFAG----ETQPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 106 y~~a~~~~L~~a~~~l~~~---~~~~~~~~lsaa~~~~~tC~d~f~~----~~~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
|++++ ++|++++.+++.+ .++|+++|||+|+++++||.|||++ .++++..+..++.++++|+|+|++.+
T Consensus 116 ~~dAv-D~L~~Sl~~L~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~~~i~~~~~~v~qltSNALAlv~~~ 191 (541)
T PLN02416 116 HQITV-SSLKRSVSRIQAGDSRKLADARAYLSAALTNKNTCLEGLDSASGPLKPKLVNSFTSTYKHVSNSLSMLPKS 191 (541)
T ss_pred HHHHH-HHHHHHHHHHhhccccchhhHHHHHHHHhcchhhHHhhhhhcCcchhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999 5999999999753 4578999999999999999999984 25678899999999999999999754
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=2.7e-24 Score=181.30 Aligned_cols=145 Identities=14% Similarity=0.180 Sum_probs=127.5
Q ss_pred ccchhhHHHHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-C--CCHHHHHHHHHH
Q 047345 26 SKIKTRLIKETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKK-V--SDPALYRFYGTC 102 (176)
Q Consensus 26 ~~~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~-~--~~~~~~~al~~C 102 (176)
+......|+..|+.|+||++|.++|.+.+. ++++|+..++++++.++..+...+.++.+. . .+++.+.+++||
T Consensus 18 ~~~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~Al~DC 93 (497)
T PLN02698 18 PFAYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSVSDSC 93 (497)
T ss_pred chhHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHHHHHH
Confidence 456678999999999999999999999764 899999999999999999999999887654 2 247788999999
Q ss_pred HHHHHHHHHhhHHHHHHHHhC---CChhhHHHHHHHHHhcHhHHHhhcC-C-------CCCchhHhhHHHHHHHHHHHHH
Q 047345 103 IEEYRAIVERQIPEAIDALQS---GDYMVSKKDAEAAAAHADSCEEQFA-G-------ETQPFSDQNKAVHGLSLVTSSI 171 (176)
Q Consensus 103 ~~~y~~a~~~~L~~a~~~l~~---~~~~~~~~~lsaa~~~~~tC~d~f~-~-------~~~pl~~~~~~~~~l~~ial~i 171 (176)
.++|++++ ++|++++.++.. ..++|+++|||+|+++++||.|||. + .+++|...+.++.+|++|+|+|
T Consensus 94 ~Ell~dsv-d~L~~Sl~~l~~~~~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSNALAm 172 (497)
T PLN02698 94 ERLMKMSL-KRLRQSLLALKGSSRKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSNSLAL 172 (497)
T ss_pred HHHHHHHH-HHHHHHHHHHhhccccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 599999998875 4578999999999999999999994 2 1456888899999999999999
Q ss_pred HHhh
Q 047345 172 LGIL 175 (176)
Q Consensus 172 ~~~l 175 (176)
++.+
T Consensus 173 v~~l 176 (497)
T PLN02698 173 VNRI 176 (497)
T ss_pred Hhhh
Confidence 9865
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.90 E-value=5.1e-23 Score=175.00 Aligned_cols=139 Identities=14% Similarity=0.120 Sum_probs=120.2
Q ss_pred HHHhcCCCCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCHHHHHHHHHHHHHHHH
Q 047345 34 KETCKHTEYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKK-----VSDPALYRFYGTCIEEYRA 108 (176)
Q Consensus 34 ~~~C~~t~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~-----~~~~~~~~al~~C~~~y~~ 108 (176)
...|+.|+||++|.++|.+.+.+. .++++++..++++++.++..+...+.++.+. ..+++.+.|++||++++++
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~~-~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELldd 81 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSSP-SDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSEL 81 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHH
Confidence 357999999999999999877543 4899999999999999999999999988631 3578889999999999999
Q ss_pred HHHhhHHHHHHHHhCCC------hhhHHHHHHHHHhcHhHHHhhcCCC----CCchhHhhHHHHHHHHHHHHHHHh
Q 047345 109 IVERQIPEAIDALQSGD------YMVSKKDAEAAAAHADSCEEQFAGE----TQPFSDQNKAVHGLSLVTSSILGI 174 (176)
Q Consensus 109 a~~~~L~~a~~~l~~~~------~~~~~~~lsaa~~~~~tC~d~f~~~----~~pl~~~~~~~~~l~~ial~i~~~ 174 (176)
++ ++|.+++.++.... .+|+++|||+|++|++||.|||.+. +..|.....++.+|++|+|+|++.
T Consensus 82 Sv-D~L~~Sl~~L~~~~~~~~~~~~DvqTWLSAALTnqdTClDGF~~~~~~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 82 NV-DYLETISSELKSAELMTDALVERVTSLLSGVVTNQQTCYDGLVDSKSSFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HH-HHHHHHHHHHhccccccccchhhHHHhHHHhhcChhhhhchhhccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99 59999999986432 4799999999999999999999843 334777788999999999999974
No 20
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.81 E-value=8.2e-19 Score=148.36 Aligned_cols=113 Identities=14% Similarity=0.079 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC---------ChhhHHH
Q 047345 61 VKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEYRAIVERQIPEAIDALQSG---------DYMVSKK 131 (176)
Q Consensus 61 ~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~a~~~~L~~a~~~l~~~---------~~~~~~~ 131 (176)
+..++.++++.+..++..+...+.++.+...+++.+.|++||.+++++++ ++|++++.+++.. ..+|+++
T Consensus 37 ~~~~~~~~L~~tl~~a~~a~~~vs~l~~~~~~~r~~~Al~DC~ELl~dav-D~L~~Sl~eL~~~~~~~~~~~~~~~DvqT 115 (520)
T PLN02201 37 PPSEFVSSLKTTVDVIRKVVSIVSQFDKVFGDSRLSNAISDCLDLLDFAA-EELSWSISASQNPNGKDNSTGDVGSDLRT 115 (520)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccccccccccchhHHHH
Confidence 55677889999999999999999988765567889999999999999999 5999999988632 1578999
Q ss_pred HHHHHHhcHhHHHhhcCCC----CCchhHhhHHHHHHHHHHHHHHHh
Q 047345 132 DAEAAAAHADSCEEQFAGE----TQPFSDQNKAVHGLSLVTSSILGI 174 (176)
Q Consensus 132 ~lsaa~~~~~tC~d~f~~~----~~pl~~~~~~~~~l~~ial~i~~~ 174 (176)
|||+|+++++||.|||.+. +..+.....++.+|++|+|+|++.
T Consensus 116 WLSAALTnq~TClDGF~~~~~~~k~~v~~~l~nvt~LtSNaLALv~~ 162 (520)
T PLN02201 116 WLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRELLTMVHP 162 (520)
T ss_pred HHHhhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999842 234667788999999999999874
No 21
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.79 E-value=3.7e-18 Score=144.37 Aligned_cols=116 Identities=16% Similarity=0.181 Sum_probs=101.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC--CChhhHHHHH
Q 047345 59 ADVKELAIILVELLQAKANETLWHVGDLFKK---VSDPALYRFYGTCIEEYRAIVERQIPEAIDALQS--GDYMVSKKDA 133 (176)
Q Consensus 59 ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~---~~~~~~~~al~~C~~~y~~a~~~~L~~a~~~l~~--~~~~~~~~~l 133 (176)
.++++|+..++++++.++..+...+..+.+. ..+++.+.+++||.++|++++ ++|++++..+.. +.++|+++||
T Consensus 49 ~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~dav-d~L~~S~~~l~~~~~~~~Dv~TWL 127 (530)
T PLN02933 49 KTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTI-SDLTTAISKLRSSSPEFNDVSMLL 127 (530)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHH
Confidence 5899999999999999999999999988653 358899999999999999999 599999999875 5689999999
Q ss_pred HHHHhcHhHHHhhcCCCC------------CchhHhhHHHHHHHHHHHHHHHhh
Q 047345 134 EAAAAHADSCEEQFAGET------------QPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 134 saa~~~~~tC~d~f~~~~------------~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
|+|+++++||.|||++.. ..+.....++.+|++|+|+|++.+
T Consensus 128 SAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~l 181 (530)
T PLN02933 128 SNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNI 181 (530)
T ss_pred HHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999998422 235566789999999999999864
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.76 E-value=5.3e-18 Score=142.06 Aligned_cols=140 Identities=11% Similarity=0.055 Sum_probs=119.5
Q ss_pred HHhcCCCCcchhhhhcccCC----CCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CHHHHHHHHHH----HHH
Q 047345 35 ETCKHTEYYNLCVASLESDP----RSLNADVKELAIILVELLQAKANETLWHVGDLFKKVS-DPALYRFYGTC----IEE 105 (176)
Q Consensus 35 ~~C~~t~~~~~C~~~L~~~p----~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~-~~~~~~al~~C----~~~ 105 (176)
..|.++++|+.|...+.... .....++..+..++++.++.++..+...+.++.+... +++++.+++|| +++
T Consensus 3 ~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~dc~~~c~el 82 (509)
T PLN02488 3 GVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDMLGVKEDTNLFEEM 82 (509)
T ss_pred eecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhHHHhHHHHHHH
Confidence 46999999999999987765 2222368999999999999999999999999888754 89999999999 999
Q ss_pred HHHHHHhhHHHHHHHHhC------CChhhHHHHHHHHHhcHhHHHhhcCCC--CCchhHhhHHHHHHHHHHHHHHHhh
Q 047345 106 YRAIVERQIPEAIDALQS------GDYMVSKKDAEAAAAHADSCEEQFAGE--TQPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 106 y~~a~~~~L~~a~~~l~~------~~~~~~~~~lsaa~~~~~tC~d~f~~~--~~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
|++++ ++|.+++..+.. ..++|+++|||+|++|++||.|||.+. +..|.....++.+|++|+|+|++.+
T Consensus 83 ~~~~~-~~l~~s~~~~~~~~~~~~~~~~d~~twLSa~lt~q~TC~dg~~~~~~~~~~~~~l~~~~~~~sn~La~~~~~ 159 (509)
T PLN02488 83 MESAK-DRMIRSVEELLGGESPNLGSYENVHTWLSGVLTSYITCIDEIGEGAYKRRVEPELEDLISRARVALAIFISI 159 (509)
T ss_pred HHHHH-HHHHHHHHHhhcccccccCcHHHHHHHHHHhHhchhhHhccccCcchHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999 499999999852 236899999999999999999999632 3446677789999999999998753
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.62 E-value=4.5e-15 Score=125.52 Aligned_cols=120 Identities=12% Similarity=0.085 Sum_probs=88.6
Q ss_pred CCcchhhhhcccCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 047345 41 EYYNLCVASLESDPRSLNADVKELAIILVELLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEYRAIVERQIPEAIDA 120 (176)
Q Consensus 41 ~~~~~C~~~L~~~p~s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~a~~~~L~~a~~~ 120 (176)
+||..|...|++-..+ -++.+....++..+..+..+. . ...-.+++||++++++++ ++|.+++..
T Consensus 58 ~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~Al~DC~ELlddav-d~L~~S~~~ 122 (529)
T PLN02170 58 PSSSSKQGFLSSVQES---MNHALFARSLAFNLTLSHRTV----------Q-THTFDPVNDCLELLDDTL-DMLSRIVVI 122 (529)
T ss_pred CCcchhhhhhhhhhcc---ChHHHHHhhhHhhhhhhhhhc----------c-cchhHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 8999999999976443 255566666665544211111 1 112568999999999999 599999965
Q ss_pred HhC-CChhhHHHHHHHHHhcHhHHHhhcCCCC------CchhHhhHHHHHHHHHHHHHHHhh
Q 047345 121 LQS-GDYMVSKKDAEAAAAHADSCEEQFAGET------QPFSDQNKAVHGLSLVTSSILGIL 175 (176)
Q Consensus 121 l~~-~~~~~~~~~lsaa~~~~~tC~d~f~~~~------~pl~~~~~~~~~l~~ial~i~~~l 175 (176)
... ...+|+++|||+|+++++||.|||++.. ..+.....++.+|++|+|+|++.+
T Consensus 123 ~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~ 184 (529)
T PLN02170 123 KHADHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSV 184 (529)
T ss_pred hccccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 443 3468999999999999999999998532 124455689999999999999754
No 24
>PLN02916 pectinesterase family protein
Probab=99.49 E-value=1.2e-13 Score=116.38 Aligned_cols=85 Identities=9% Similarity=0.003 Sum_probs=71.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhhHHHHHHHHHhcHhHHHhhcCCCCCchhHhhHHHHHHHHHHH
Q 047345 90 VSDPALYRFYGTCIEEYRAIVERQIPEAIDALQSGDYMVSKKDAEAAAAHADSCEEQFAGETQPFSDQNKAVHGLSLVTS 169 (176)
Q Consensus 90 ~~~~~~~~al~~C~~~y~~a~~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d~f~~~~~pl~~~~~~~~~l~~ial 169 (176)
+.+-....|++||+++|++++ ++|.+++..+.....+|+++|||+|++|++||.|||.+..........++.+|++|+|
T Consensus 56 ~~~~~~~~Al~DC~ELl~dSv-d~L~~Sl~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~v~nvt~ltSNaL 134 (502)
T PLN02916 56 GSYYNLGEALSDCEKLYDESE-ARLSKLLVSHENFTVEDARTWLSGVLANHHTCLDGLEQKGQGHKPMAHNVTFVLSEAL 134 (502)
T ss_pred CCcccHhHHHHHHHHHHHHHH-HHHHHHHHhhccCchHHHHHHHHHHHhCHhHHHHhhhhccccchHHHHHHHHHHHHHH
Confidence 345567899999999999999 5999999888766789999999999999999999997432222345679999999999
Q ss_pred HHHHhh
Q 047345 170 SILGIL 175 (176)
Q Consensus 170 ~i~~~l 175 (176)
+|++.+
T Consensus 135 Alv~~~ 140 (502)
T PLN02916 135 ALYKKS 140 (502)
T ss_pred HHhhhh
Confidence 999764
No 25
>TIGR00208 fliS flagellar biosynthetic protein FliS. The function of this protein in flagellar biosynthesis is unknown, but appears to be regulatory. The member of this family in Vibrio parahaemolyticus is designated FlaJ (creating a synonym for FliS) and was shown essential for flagellin biosynthesis.
Probab=65.88 E-value=42 Score=23.30 Aligned_cols=36 Identities=17% Similarity=0.120 Sum_probs=16.8
Q ss_pred HHHHHHHHhhHHHHHHHHhCCChhhHHHHHHHHHhcH
Q 047345 104 EEYRAIVERQIPEAIDALQSGDYMVSKKDAEAAAAHA 140 (176)
Q Consensus 104 ~~y~~a~~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~ 140 (176)
-+|+.++. +|+.|..++..+++...+..++.|..-.
T Consensus 26 mLydg~i~-~l~~a~~ai~~~d~~~~~~~i~ka~~Ii 61 (124)
T TIGR00208 26 MLYNGCLK-FIRLAAQAIENDDIERKNENLIKAQNII 61 (124)
T ss_pred HHHHHHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 34445552 4555555555555544444444444333
No 26
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=62.67 E-value=28 Score=20.15 Aligned_cols=44 Identities=9% Similarity=0.166 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHHHhhHH
Q 047345 71 LLQAKANETLWHVGDLFKKVSDPALYRFYGTCIEEYRAIVERQIP 115 (176)
Q Consensus 71 ~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~a~~~~L~ 115 (176)
.++.....+.+..+.+.-...|+..|..+..|.+..+..++ .|+
T Consensus 4 q~lAslK~~qA~Le~fal~T~d~~AK~~y~~~a~~l~~ii~-~L~ 47 (50)
T PF07870_consen 4 QTLASLKKAQADLETFALQTQDQEAKQMYEQAAQQLEEIIQ-DLE 47 (50)
T ss_pred HHHHHHHHHHhhHHHHHhhcCCHHHHHHHHHHHHHHHHHHH-HhH
Confidence 33444455555554444445688899999999999998884 664
No 27
>PRK05685 fliS flagellar protein FliS; Validated
Probab=49.04 E-value=90 Score=21.84 Aligned_cols=23 Identities=17% Similarity=0.029 Sum_probs=12.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q 047345 59 ADVKELAIILVELLQAKANETLW 81 (176)
Q Consensus 59 ad~~~l~~~ai~~a~~~a~~~~~ 81 (176)
++|.+|..+..+-++.....+..
T Consensus 22 asp~~Li~mLydgai~~l~~A~~ 44 (132)
T PRK05685 22 ASPHKLIQMLYEGALSFLAQAKL 44 (132)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555554444443
No 28
>PF02561 FliS: Flagellar protein FliS; InterPro: IPR003713 The fliD operon of several bacteria consists of three flagellar genes, fliD, fliS, and fliT, and is transcribed in this order []. In Bacillus subtilis the operon encoding the flagellar proteins FliD, FliS, and FliT is sigma D-dependent [].; GO: 0009296 flagellum assembly, 0009288 bacterial-type flagellum; PDB: 1VH6_A 3IQC_B 3K1I_B 1ORJ_B 1ORY_A.
Probab=46.89 E-value=92 Score=21.30 Aligned_cols=26 Identities=12% Similarity=0.067 Sum_probs=16.9
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHH
Q 047345 58 NADVKELAIILVELLQAKANETLWHV 83 (176)
Q Consensus 58 ~ad~~~l~~~ai~~a~~~a~~~~~~i 83 (176)
+++|.+|..+..+.++.....+...+
T Consensus 15 tasp~~Li~~Lyd~ai~~l~~a~~a~ 40 (122)
T PF02561_consen 15 TASPHQLILMLYDGAIEFLKQAKEAI 40 (122)
T ss_dssp G-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777777777777766666543
No 29
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=45.81 E-value=14 Score=24.45 Aligned_cols=27 Identities=22% Similarity=0.394 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhCCC
Q 047345 98 FYGTCIEEYRAIVERQIPEAIDALQSGD 125 (176)
Q Consensus 98 al~~C~~~y~~a~~~~L~~a~~~l~~~~ 125 (176)
.++||.+.|.+-.+ ++++|.+.++++.
T Consensus 62 tFnDcpeA~~eL~~-eI~eAK~dLr~kG 88 (91)
T PF08285_consen 62 TFNDCPEAAKELQK-EIKEAKADLRKKG 88 (91)
T ss_pred ccCCCHHHHHHHHH-HHHHHHHHHHHcC
Confidence 57889999999994 9999999988654
No 30
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=42.40 E-value=19 Score=23.48 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhCC
Q 047345 98 FYGTCIEEYRAIVERQIPEAIDALQSG 124 (176)
Q Consensus 98 al~~C~~~y~~a~~~~L~~a~~~l~~~ 124 (176)
-++||.+.|-+-+ .++++|.++++++
T Consensus 66 TfnDc~eA~veL~-~~IkEAr~~L~rk 91 (95)
T KOG4841|consen 66 TFNDCEEAAVELQ-SQIKEARADLARK 91 (95)
T ss_pred ccCCcHHHHHHHH-HHHHHHHHHHHHc
Confidence 5789999999999 5999999998764
No 31
>COG1516 FliS Flagellin-specific chaperone FliS [Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones]
Probab=41.08 E-value=69 Score=22.69 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhHHHHHHHHhCCChhhHHHHHHHHHhcH
Q 047345 103 IEEYRAIVERQIPEAIDALQSGDYMVSKKDAEAAAAHA 140 (176)
Q Consensus 103 ~~~y~~a~~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~ 140 (176)
.-+|+.+++ .|..|..++..+++......+..|..-.
T Consensus 25 ~MLyeg~l~-~l~~A~~aie~~~i~~k~~~i~ka~~Ii 61 (132)
T COG1516 25 LMLYEGALK-FLKRAKEAIEQEDIEEKNESIDKAIDII 61 (132)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 456666663 6666666666666666655555554433
No 32
>KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=35.55 E-value=2.4e+02 Score=24.72 Aligned_cols=55 Identities=15% Similarity=0.120 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHHH--HHhhHHHHH-----HHHhCCChhhHHHHHHHHHhcHhHHHhh
Q 047345 92 DPALYRFYGTCIEEYRAI--VERQIPEAI-----DALQSGDYMVSKKDAEAAAAHADSCEEQ 146 (176)
Q Consensus 92 ~~~~~~al~~C~~~y~~a--~~~~L~~a~-----~~l~~~~~~~~~~~lsaa~~~~~tC~d~ 146 (176)
.......+.-|++.++.- +++...+|. -.++.++|+.+....+.+..+..+|++|
T Consensus 482 ~~eAa~~yek~v~~~~~eg~~~~~t~ka~~fLA~~f~k~~~~~~As~Ya~~~~~~~~e~eea 543 (559)
T KOG1155|consen 482 LNEAAQYYEKYVEVSELEGEIDDETIKARLFLAEYFKKMKDFDEASYYATLVLKGETECEEA 543 (559)
T ss_pred HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHhcCCchHHHH
Confidence 334456677777766211 111233333 3455679999999999999888888876
No 33
>TIGR03504 FimV_Cterm FimV C-terminal domain. This protein is found at the extreme C-terminus of FimV from Pseudomonas aeruginosa, and of TspA of Neisseria meningitidis. Disruption of the former blocks twitching motility from type IV pili; Semmler, et al. suggest a role in peptidoglycan layer remodelling required by type IV fimbrial systems.
Probab=33.38 E-value=74 Score=17.82 Aligned_cols=25 Identities=16% Similarity=0.117 Sum_probs=20.4
Q ss_pred HHHHHHHHhCCChhhHHHHHHHHHh
Q 047345 114 IPEAIDALQSGDYMVSKKDAEAAAA 138 (176)
Q Consensus 114 L~~a~~~l~~~~~~~~~~~lsaa~~ 138 (176)
|+-|...+..||++.++.+|..++.
T Consensus 3 LdLA~ayie~Gd~e~Ar~lL~evl~ 27 (44)
T TIGR03504 3 LDLARAYIEMGDLEGARELLEEVIE 27 (44)
T ss_pred hHHHHHHHHcCChHHHHHHHHHHHH
Confidence 4557777888999999999988874
No 34
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=31.31 E-value=1.2e+02 Score=18.14 Aligned_cols=28 Identities=7% Similarity=0.210 Sum_probs=21.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 047345 91 SDPALYRFYGTCIEEYRAIVERQIPEAID 119 (176)
Q Consensus 91 ~~~~~~~al~~C~~~y~~a~~~~L~~a~~ 119 (176)
.+..++.+++.|.+-|-++- ..+.+...
T Consensus 37 L~~~E~~Ci~~C~~ky~~~~-~~v~~~~~ 64 (66)
T PF02953_consen 37 LSSKEESCIDNCVDKYIDTN-QFVSKRFQ 64 (66)
T ss_dssp --HHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 47788999999999999987 36665543
No 35
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.84 E-value=1.6e+02 Score=19.44 Aligned_cols=52 Identities=15% Similarity=0.231 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-----hhc---CCCHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 047345 66 IILVELLQAKANETLWHVGDL-----FKK---VSDPALYRFYGTCIEEYRAIVERQIPEAI 118 (176)
Q Consensus 66 ~~ai~~a~~~a~~~~~~i~~l-----~~~---~~~~~~~~al~~C~~~y~~a~~~~L~~a~ 118 (176)
.+..++|..+|.+.+..+..- ... +.++.++.++..|.+-|-++-. -+.++.
T Consensus 25 qVkqqlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~~Cis~CmdRyMdawn-iVSrty 84 (97)
T KOG1733|consen 25 QVKQQLAVANAQELVSKISEKCFDKCITKPGSSLDSSEKSCISRCMDRYMDAWN-IVSRTY 84 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchHHHHHHHHHHHHHHHH-HHHHHH
Confidence 344567777777777666421 111 2477889999999999998873 555444
No 36
>PRK09634 nusB transcription antitermination protein NusB; Provisional
Probab=29.39 E-value=2.4e+02 Score=21.60 Aligned_cols=89 Identities=10% Similarity=0.113 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHH------H
Q 047345 60 DVKELAIILVELLQAKANETLWHVGDLFKKV------------SDPALYRFYGTCIEEYRAIVERQIPEAIDA------L 121 (176)
Q Consensus 60 d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~------------~~~~~~~al~~C~~~y~~a~~~~L~~a~~~------l 121 (176)
+..++...+++....+..++......-++++ .-+..+.-+..+.+.-+.+++ .+..+... .
T Consensus 29 ~~~~l~~~a~~~l~~~~~~~l~~~~~el~~~~~~l~~s~~~~~~~~~~r~~l~~~~~~~~~~~n-g~s~~~~lp~ll~~~ 107 (207)
T PRK09634 29 QLEELLLAAVRTLTQEVRETLDTAAAELERAQQRLLDSEGDASDLESARTMLQEALTLAETAIN-RLSAALELPELLQLA 107 (207)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHc-cccHHHHHHHHHHhC
Confidence 6777888888777777777666543222110 112334555555555555553 33222221 1
Q ss_pred h-CCChhhHHHHHHHHHhcHhHHHhhcCC
Q 047345 122 Q-SGDYMVSKKDAEAAAAHADSCEEQFAG 149 (176)
Q Consensus 122 ~-~~~~~~~~~~lsaa~~~~~tC~d~f~~ 149 (176)
+ ..+...+...+..++.+...++.-...
T Consensus 108 ~q~~~r~~a~~Lv~gvlr~~~~LD~iI~~ 136 (207)
T PRK09634 108 DQEEVREYALERIGAVIRNRKEIDQLLDT 136 (207)
T ss_pred CcHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 1 112233455666666666666666655
No 37
>PF14346 DUF4398: Domain of unknown function (DUF4398)
Probab=26.46 E-value=1.9e+02 Score=18.92 Aligned_cols=35 Identities=34% Similarity=0.449 Sum_probs=27.9
Q ss_pred HHHHHHHhhHHHHHHHHhCCChhhHHHHHHHHHhcH
Q 047345 105 EYRAIVERQIPEAIDALQSGDYMVSKKDAEAAAAHA 140 (176)
Q Consensus 105 ~y~~a~~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~ 140 (176)
.|..+- ..|..+...+..|+|..++.....|..+.
T Consensus 41 el~~A~-~~L~~A~~a~~~~~y~~A~~~A~~A~~~A 75 (103)
T PF14346_consen 41 ELKEAR-EKLQRAKAALDDGDYERARRLAEQAQADA 75 (103)
T ss_pred HHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 777888 49999999999999998877766665543
No 38
>PF10360 DUF2433: Protein of unknown function (DUF2433); InterPro: IPR018829 This entry represents a conserved domain of 120 residues from a family fungal proteins. Their function is not known.
Probab=25.37 E-value=96 Score=21.99 Aligned_cols=20 Identities=20% Similarity=0.145 Sum_probs=12.4
Q ss_pred hhHHHHHHHHHHHHHHHhhC
Q 047345 157 QNKAVHGLSLVTSSILGILG 176 (176)
Q Consensus 157 ~~~~~~~l~~ial~i~~~l~ 176 (176)
.+...++|..+||.|+..++
T Consensus 45 ~~~~q~~LL~~AL~v~~kiP 64 (132)
T PF10360_consen 45 PNEAQRNLLENALSVFDKIP 64 (132)
T ss_pred CCHHHHHHHHHHHHHHHhCC
Confidence 34445667777777766653
No 39
>KOG4514 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.36 E-value=3e+02 Score=20.76 Aligned_cols=65 Identities=18% Similarity=0.237 Sum_probs=38.4
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CC-CHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCCh
Q 047345 56 SLNADVKELAIILVELLQAKANETLWHVGDLFKK-VS-DPALYRFYGTCIEEYRAIVERQIPEAIDALQSGDY 126 (176)
Q Consensus 56 s~~ad~~~l~~~ai~~a~~~a~~~~~~i~~l~~~-~~-~~~~~~al~~C~~~y~~a~~~~L~~a~~~l~~~~~ 126 (176)
.+..|+.-|..+- ..+....+.+..|+++ ++ -.....---+|.+.|.++++ .|.+++++=-++-|
T Consensus 119 ip~vDp~VL~DlE-----~~~~el~~~vD~llr~lgg~lh~is~lt~~~vq~yr~aV~-kl~d~~DanIK~~Y 185 (222)
T KOG4514|consen 119 IPEVDPSVLSDLE-----LEAQELASSVDNLLRNLGGLLHSISSLTADNVQVYRNAVN-KLTDTLDANIKCQY 185 (222)
T ss_pred CCCCChHHHHHHH-----HHHHHHHHHHHHHHHHhhhHHHHHHHhhhhHHHHHHHHHH-HHHHHhhhhhHHHH
Confidence 3445777665543 2334444555556654 21 22334456789999999995 88888775333333
No 40
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=24.74 E-value=1.5e+02 Score=17.05 Aligned_cols=41 Identities=22% Similarity=0.405 Sum_probs=19.5
Q ss_pred HHHHHHhhHHHHHHHHhCCC--hhhHHHHHHHHHhcHhHHHhhc
Q 047345 106 YRAIVERQIPEAIDALQSGD--YMVSKKDAEAAAAHADSCEEQF 147 (176)
Q Consensus 106 y~~a~~~~L~~a~~~l~~~~--~~~~~~~lsaa~~~~~tC~d~f 147 (176)
|+.++ .+|++.+..+.+++ .+++-.....++.-...|.+-+
T Consensus 1 fEe~~-~~Le~Iv~~Le~~~~sLdes~~lyeeg~~l~~~c~~~L 43 (53)
T PF02609_consen 1 FEEAM-ERLEEIVEKLESGELSLDESLKLYEEGMELIKKCQERL 43 (53)
T ss_dssp HHHHH-HHHHHHHHHHHTT-S-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHH-HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555 25555555555542 3344444444444555554433
No 41
>KOG2003 consensus TPR repeat-containing protein [General function prediction only]
Probab=24.60 E-value=4.6e+02 Score=23.08 Aligned_cols=26 Identities=23% Similarity=0.285 Sum_probs=23.2
Q ss_pred CCChhhHHHHHHHHHhcHhHHHhhcC
Q 047345 123 SGDYMVSKKDAEAAAAHADSCEEQFA 148 (176)
Q Consensus 123 ~~~~~~~~~~lsaa~~~~~tC~d~f~ 148 (176)
+||++.+-.....|+.+-..|...+-
T Consensus 503 ngd~dka~~~ykeal~ndasc~ealf 528 (840)
T KOG2003|consen 503 NGDLDKAAEFYKEALNNDASCTEALF 528 (840)
T ss_pred cCcHHHHHHHHHHHHcCchHHHHHHH
Confidence 46899999999999999999999866
No 42
>PF08287 DASH_Spc19: Spc19; InterPro: IPR013251 Spc19 is a component of the DASH complex. The DASH complex associates with the spindle pole body and is important for spindle and kinetochore integrity during cell division [, ].
Probab=22.98 E-value=1.9e+02 Score=20.98 Aligned_cols=25 Identities=28% Similarity=0.642 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhCC
Q 047345 99 YGTCIEEYRAIVERQIPEAIDALQSG 124 (176)
Q Consensus 99 l~~C~~~y~~a~~~~L~~a~~~l~~~ 124 (176)
|++|+..+..++ ..|+.++..++.|
T Consensus 2 L~~cV~SL~~S~-~lL~~Si~~L~~~ 26 (153)
T PF08287_consen 2 LSNCVSSLRSSV-QLLQSSIETLDSG 26 (153)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhc
Confidence 567777777777 4777777777765
No 43
>PRK09591 celC cellobiose phosphotransferase system IIA component; Reviewed
Probab=22.72 E-value=1.8e+02 Score=19.57 Aligned_cols=21 Identities=19% Similarity=0.526 Sum_probs=11.0
Q ss_pred hHHHHHHHHhCCChhhHHHHH
Q 047345 113 QIPEAIDALQSGDYMVSKKDA 133 (176)
Q Consensus 113 ~L~~a~~~l~~~~~~~~~~~l 133 (176)
..-+|++..+.|+|+.++..+
T Consensus 23 ~~~eAl~~ak~gdf~~A~~~l 43 (104)
T PRK09591 23 EVHEAFAAMREGNFDLAEQKL 43 (104)
T ss_pred HHHHHHHHHHcCCHHHHHHHH
Confidence 444455555566665554433
No 44
>cd00215 PTS_IIA_lac PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. This family of proteins normally function as a homotrimer, stabilized by a centrally located metal ion. Separation into subunits is thought to occur after phosphorylation.
Probab=22.66 E-value=1.8e+02 Score=19.25 Aligned_cols=21 Identities=24% Similarity=0.362 Sum_probs=11.0
Q ss_pred hHHHHHHHHhCCChhhHHHHH
Q 047345 113 QIPEAIDALQSGDYMVSKKDA 133 (176)
Q Consensus 113 ~L~~a~~~l~~~~~~~~~~~l 133 (176)
..-+|++..+.|+|+.++..+
T Consensus 18 ~~~eAl~~a~~g~fe~A~~~l 38 (97)
T cd00215 18 KALEALKAAKEGDFAEAEELL 38 (97)
T ss_pred HHHHHHHHHHcCCHHHHHHHH
Confidence 444555555666665554433
No 45
>KOG3470 consensus Beta-tubulin folding cofactor A [Posttranslational modification, protein turnover, chaperones]
Probab=20.45 E-value=2.9e+02 Score=18.77 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhhhhcCCCH----HHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q 047345 72 LQAKANETLWHVGDLFKKVSDP----ALYRFYGTCIEEYRAIVERQIPEAIDALQ 122 (176)
Q Consensus 72 a~~~a~~~~~~i~~l~~~~~~~----~~~~al~~C~~~y~~a~~~~L~~a~~~l~ 122 (176)
....+...-..+.++..++.+| ..+..++.|..+.-++.. +|+++...|.
T Consensus 25 Yekev~~eeakvakl~~dg~d~ydlkkQeeVl~et~~mlPD~~~-RL~~a~~DLe 78 (107)
T KOG3470|consen 25 YEKEVKEEEAKVAKLKDDGADPYDLKKQEEVLKETRMMLPDSQR-RLRKAYEDLE 78 (107)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHChHHHH-HHHHHHHHHH
Confidence 3344555555666676665555 346789999999999984 8998887665
No 46
>cd02337 ZZ_CBP Zinc finger, ZZ type. Zinc finger present in CBP/p300 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. CREB-binding protein (CBP) is a large multidomain protein that provides binding sites for transcriptional coactivators, the role of the ZZ domain in CBP/p300 is unclear.
Probab=20.43 E-value=56 Score=17.99 Aligned_cols=21 Identities=24% Similarity=0.629 Sum_probs=17.9
Q ss_pred HHHHhcCCCCcchhhhhcccC
Q 047345 33 IKETCKHTEYYNLCVASLESD 53 (176)
Q Consensus 33 i~~~C~~t~~~~~C~~~L~~~ 53 (176)
+..-|...+++++|.+.+.+.
T Consensus 12 ~r~~C~~C~dfDLC~~C~~~~ 32 (41)
T cd02337 12 TRWHCTVCEDYDLCITCYNTK 32 (41)
T ss_pred CceECCCCcchhhHHHHhCCC
Confidence 566799999999999999763
Done!