Your job contains 1 sequence.
>047355
METPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS
PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS
DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK
FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH
PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK
IGNSSGCDSVNC
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047355
(312 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 1166 2.0e-118 1
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 1071 2.4e-108 1
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 1067 6.3e-108 1
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 1067 6.3e-108 1
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 1067 6.3e-108 1
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 1067 6.3e-108 1
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 1067 6.3e-108 1
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 1057 7.2e-107 1
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 1056 9.2e-107 1
FB|FBgn0025724 - symbol:beta'Cop "beta'-coatomer protein"... 1018 9.8e-103 1
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 1014 2.6e-102 1
WB|WBGene00009542 - symbol:F38E11.5 species:6239 "Caenorh... 1012 4.2e-102 1
ASPGD|ASPL0000006005 - symbol:AN5972 species:162425 "Emer... 1010 6.9e-102 1
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 966 3.2e-97 1
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 966 3.2e-97 1
CGD|CAL0005039 - symbol:orf19.3467 species:5476 "Candida ... 963 6.6e-97 1
SGD|S000003105 - symbol:SEC27 "Essential beta'-coat prote... 939 2.3e-94 1
POMBASE|SPBC16C6.13c - symbol:sec27 "coatomer beta' subun... 904 1.2e-90 1
WB|WBGene00012757 - symbol:Y41C4A.11 species:6239 "Caenor... 726 8.6e-72 1
DICTYBASE|DDB_G0267982 - symbol:copA "coatomer protein co... 354 1.4e-47 2
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 341 9.9e-47 2
ASPGD|ASPL0000037303 - symbol:copA species:162425 "Emeric... 398 9.8e-36 1
FB|FBgn0025725 - symbol:alphaCop "alpha-coatomer protein"... 388 1.2e-34 1
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 385 2.4e-34 1
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 368 1.6e-32 1
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 362 6.9e-32 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 361 1.7e-31 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 356 3.7e-31 1
ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co... 351 1.1e-30 1
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p... 347 2.5e-30 1
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p... 347 2.6e-30 1
UNIPROTKB|Q27954 - symbol:COPA "Coatomer subunit alpha" s... 347 2.8e-30 1
UNIPROTKB|F1RJX8 - symbol:COPA "Uncharacterized protein" ... 347 2.8e-30 1
MGI|MGI:1334462 - symbol:Copa "coatomer protein complex s... 347 2.8e-30 1
UNIPROTKB|G3V6T1 - symbol:Copa "Protein Copa" species:101... 347 2.8e-30 1
UNIPROTKB|P53621 - symbol:COPA "Coatomer subunit alpha" s... 346 3.6e-30 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 332 4.9e-30 1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 339 2.0e-29 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 320 9.1e-29 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 319 1.2e-28 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 319 1.2e-28 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 319 1.2e-28 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 319 1.2e-28 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 319 1.2e-28 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 319 1.2e-28 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 319 1.2e-28 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 319 1.2e-28 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 319 1.2e-28 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 318 1.5e-28 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 317 1.9e-28 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 316 2.4e-28 1
WB|WBGene00022119 - symbol:Y71F9AL.17 species:6239 "Caeno... 323 1.0e-27 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 310 1.0e-27 1
UNIPROTKB|F1PU93 - symbol:COPA "Coatomer subunit alpha" s... 315 7.3e-27 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 278 1.7e-26 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 305 1.7e-26 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 287 2.9e-25 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 294 5.2e-25 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 283 7.6e-25 1
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 291 8.4e-25 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 282 9.7e-25 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 282 9.7e-25 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 279 2.2e-24 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 172 2.4e-24 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 281 3.6e-24 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 275 5.3e-24 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 275 5.3e-24 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 275 5.3e-24 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 275 5.3e-24 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 275 5.3e-24 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 275 5.3e-24 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 279 6.0e-24 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 273 8.7e-24 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 272 1.1e-23 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 271 1.4e-23 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 272 1.5e-23 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 279 1.6e-23 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 274 1.6e-23 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 271 1.7e-23 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 279 1.7e-23 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 274 2.2e-23 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 265 6.1e-23 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 268 6.4e-23 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 275 6.8e-23 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 265 8.3e-23 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 265 8.4e-23 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 263 1.0e-22 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 261 1.6e-22 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 260 2.1e-22 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 265 2.1e-22 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 263 3.6e-22 1
ASPGD|ASPL0000054735 - symbol:AN0292 species:162425 "Emer... 250 6.1e-22 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 254 9.0e-22 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 254 9.0e-22 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 254 9.0e-22 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 264 1.0e-21 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 255 1.3e-21 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 259 1.5e-21 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 255 1.5e-21 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 264 1.6e-21 1
WARNING: Descriptions of 1463 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 206/299 (68%), Positives = 249/299 (83%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L+I+++F Q+S+RVKSVD HPT+PW+LASLYSGT+CIWNY +QT KS VT+ PVR
Sbjct: 217 PLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVR 276
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+AKF+AR+ W+V G+DD FIRV++YNTM +K FEAH DYIR +AVHPT P+VL++SDD
Sbjct: 277 SAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDM 336
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDWEK W CTQ FEGHSHYVMQ FNPKD NTFASASLD TI+IWN+ S FTL
Sbjct: 337 LIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 396
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
DAH KG+NC+DYF DK YLITGSDD T KVWDY+TK+CVQ LEGHT+NV+AV FHPEL
Sbjct: 397 DAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPEL 456
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302
IIIT SEDGT+ IW+ATT+RL+NTL+ GLERVW+IG+ KGS +V G D G+++VK+G
Sbjct: 457 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLG 515
Score = 208 (78.3 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 71/258 (27%), Positives = 122/258 (47%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVF------DYNTMASVKEFEAHEDYIRSLAVHPTF 113
SPV+T FV W C D ++RVF D + ++F + ++S+ +HPT
Sbjct: 192 SPVQT--FV----W-TC--KDVYVRVFLIALKFDPLRLEIKRKFAQRSERVKSVDLHPTE 242
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
P++L + + +W+++ ++F+ V + F + A A D I+++N
Sbjct: 243 PWILASLYSGTLCIWNYQTQ-TMVKSFDVTELPVRSAKFIARKQWVVAGAD-DMFIRVYN 300
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK-TCVQILEGHTN 232
++ +AH I C+ T Y+++ SDD +K+WD+E C QI EGH++
Sbjct: 301 YNTMDKIKVFEAHADYIRCVAVHPTLP--YVLSSSDDMLIKLWDWEKGWLCTQIFEGHSH 358
Query: 233 NVTAVCFHP-ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ--VA 289
V V F+P + +AS D TI IWN + TL + L+ V + Y G ++ +
Sbjct: 359 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLI 418
Query: 290 FGCDNGTLIVKIGNSSGC 307
G D+ T V + C
Sbjct: 419 TGSDDHTAKVWDYQTKSC 436
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 187/308 (60%), Positives = 240/308 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ V FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 186/308 (60%), Positives = 239/308 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 186/308 (60%), Positives = 239/308 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 186/308 (60%), Positives = 239/308 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 186/308 (60%), Positives = 239/308 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 186/308 (60%), Positives = 239/308 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 185/308 (60%), Positives = 237/308 (76%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ EGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 1056 (376.8 bits), Expect = 9.2e-107, P = 9.2e-107
Identities = 182/308 (59%), Positives = 240/308 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HP++PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+KFVAR++W++ G+DD IRVF+YNT+ V FEAH DYIR +AVHPT P++LT+SDD
Sbjct: 62 ASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDWEK W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ H+KG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ V FHPEL
Sbjct: 182 EGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++I+K+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNSVALGYDEGSIIIKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 177/308 (57%), Positives = 232/308 (75%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL+L I++ +SDRVK VD HP +PW+L +LY+G V I NY +Q K +V D PVR
Sbjct: 2 PLKLDIKRRLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+A+FVAR++WI+ GSDD IRVF+YNT+ V FEAH DY+R +AVHPT P VLT+SDD
Sbjct: 62 SARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLW+WEK W C + FEGH+HYVMQ FNPKD NTFASASLD T+++W + S+ A FTL
Sbjct: 122 LIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NC+DY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH N++AVCFHPEL
Sbjct: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
I++T SEDGT+ IW++ T+RL+ L+ G ERVW+I +G+N VA G D G++I+K+G
Sbjct: 242 PIVLTGSEDGTVRIWHSGTYRLETCLNYGFERVWTISSMRGTNNVALGYDEGSIIIKVGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 173/302 (57%), Positives = 238/302 (78%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVT-DSPV 62
PL L I+K+ +SDRVKSVD HPT+PW+LASLY G V IWNY +Q KS +V+ ++PV
Sbjct: 2 PLRLDIKKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPV 61
Query: 63 RTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDD 122
RTA+F+A++ WIV GSDD +IRV++YNTM +K FEAH DYIR + VHPT P++L++SDD
Sbjct: 62 RTARFIAKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDD 121
Query: 123 KLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT 182
IKLWD+EK W TQ FEGHSHYVM A+NPKD N FA+ASLD T+++W+++S FT
Sbjct: 122 MFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFT 181
Query: 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
L+ HEKGIN ++YF +K YLI+G+DD VK+WDY++KTCVQ LEGH+NNV+ VC+HPE
Sbjct: 182 LEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPE 241
Query: 243 LRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302
L +I++ SEDGT+ +W+++T+RL+ TL+ G+ VWS+ + +GSN + G D+GT+++KIG
Sbjct: 242 LPLILSGSEDGTVKLWHSSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKIG 301
Query: 303 NS 304
+
Sbjct: 302 KN 303
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
Identities = 171/308 (55%), Positives = 232/308 (75%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L ++++ + +SDRVK VD HP + W+LA+LY+G V IWNY +QT KS +V D PVR
Sbjct: 2 PLRLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFV R+ W+V GSDD IRVF+YNT+ V +FEAH DY+RSL VHPT P+V+++SDD
Sbjct: 62 AAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
L+K+WDW+ W Q+FEGH+HYVMQ A NPKD NTFA+ASLD T+++W S+ FTL
Sbjct: 122 LVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NC+DY+ +K Y+I+G+DD VK+WDY+ KTCVQ L+GH NV++VCFHPEL
Sbjct: 182 EGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
+IIT SED T+ +W+A T+RL+ TL+ GLERVW I +KG+N +A G D G++ +K+G
Sbjct: 242 PLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANTIAIGYDEGSVTLKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAVSMD 309
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 176/308 (57%), Positives = 233/308 (75%)
Query: 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRT 64
+ L I+++ +S+RVK +DFHPT+PW+L +LYSG V IW+Y +Q+ K+ ++TD PVR
Sbjct: 1 MRLDIKRQLFARSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRA 60
Query: 65 AKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
+F+AR++WIVCGSDD +R+++YNT + FEAH DYIRS+AVHPT PFVLTASDD
Sbjct: 61 GRFIARKNWIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMT 120
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
IKLWDWEK W+C Q +EGHSHYVM A NPKD NTFASA LD T++IW++ S A FTL+
Sbjct: 121 IKLWDWEKGWKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHANFTLE 180
Query: 185 AHE-KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
AHE KG+N +DY+ +DK YL+T SDD TVKVWDY TK + LEGHT+NV+ C+HPEL
Sbjct: 181 AHETKGVNHVDYYPQADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFACYHPEL 240
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
+II+ SEDGTI IW+A T+RL+ +LS GLER W + Y++G VA G D+G ++VK+G
Sbjct: 241 PVIISGSEDGTIKIWHANTYRLEQSLSYGLERAWCVSYQRGKQGVALGFDDGAVVVKMGR 300
Query: 304 SSGCDSVN 311
S++
Sbjct: 301 EEPAVSMD 308
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 169/280 (60%), Positives = 217/280 (77%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+LASLY+G+VC+WN+ +QT K+ +V D PVR AKFVAR++W+V G+DD IRVF+YNT+
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
V FEAH DYIR +AVHPT PF+LT+SDD LIKLWDW+K W C+Q FEGH+HYVMQ
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
NPKD N FASASLD TI++W + SS+ FTL+ HEKG+NCIDY+ DK YLI+G+DD
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDR 180
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
VK+WDY+ KTCVQ LEGH NV+ FHPEL IIIT SEDGT+ IW+++T+RL++TL+
Sbjct: 181 LVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNY 240
Query: 272 GLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
G+ERVW + +GSN VA G D G++IVK+G S++
Sbjct: 241 GMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMD 280
Score = 201 (75.8 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 53/207 (25%), Positives = 104/207 (50%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV--TDSPVRTAKFVAR 70
F SD ++ + HPTQP++L S + +W++ + + V T ++
Sbjct: 66 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 125
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--TFPFVLTASDDKLIKLW 128
+ S D+ I+V+ + + E HE + + + P++++ +DD+L+K+W
Sbjct: 126 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 185
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
D++ N C QT EGH+ V ++F+P +L + S DGT++IW+ + + TL+ +
Sbjct: 186 DYQ-NKTCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 243
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKV 215
+ C+ S+ V L G D+ ++ V
Sbjct: 244 RVWCVASLRGSNNVAL--GYDEGSIIV 268
Score = 183 (69.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 54/242 (22%), Positives = 105/242 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V++ F + WV+ + ++NY++ + +R + +I+ SD
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSD 90
Query: 80 DKFIRVFDYNTMASVKE-FEAHEDYIRSLAVHP--TFPFVLTASDDKLIKLWDWEKNWEC 136
D I+++D++ S + FE H Y+ + ++P F +AS D+ IK+W +
Sbjct: 91 DMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSS-SP 148
Query: 137 TQTFEGHSHYV-MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY 195
T EGH V ++ D S + D ++IW+ + TL+ H + ++C +
Sbjct: 149 NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASF 208
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTI 255
+ +ITGS+D TV++W T L V V + ++G+I
Sbjct: 209 H--PELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 266
Query: 256 LI 257
++
Sbjct: 267 IV 268
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 169/280 (60%), Positives = 217/280 (77%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+LASLY+G+VC+WN+ +QT K+ +V D PVR AKFVAR++W+V G+DD IRVF+YNT+
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
V FEAH DYIR +AVHPT PF+LT+SDD LIKLWDW+K W C+Q FEGH+HYVMQ
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
NPKD N FASASLD TI++W + SS+ FTL+ HEKG+NCIDY+ DK YLI+G+DD
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDR 180
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
VK+WDY+ KTCVQ LEGH NV+ FHPEL IIIT SEDGT+ IW+++T+RL++TL+
Sbjct: 181 LVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNY 240
Query: 272 GLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
G+ERVW + +GSN VA G D G++IVK+G S++
Sbjct: 241 GMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMD 280
Score = 201 (75.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 53/207 (25%), Positives = 104/207 (50%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV--TDSPVRTAKFVAR 70
F SD ++ + HPTQP++L S + +W++ + + V T ++
Sbjct: 66 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 125
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--TFPFVLTASDDKLIKLW 128
+ S D+ I+V+ + + E HE + + + P++++ +DD+L+K+W
Sbjct: 126 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 185
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
D++ N C QT EGH+ V ++F+P +L + S DGT++IW+ + + TL+ +
Sbjct: 186 DYQ-NKTCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 243
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKV 215
+ C+ S+ V L G D+ ++ V
Sbjct: 244 RVWCVASLRGSNNVAL--GYDEGSIIV 268
Score = 183 (69.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 54/242 (22%), Positives = 105/242 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V++ F + WV+ + ++NY++ + +R + +I+ SD
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSD 90
Query: 80 DKFIRVFDYNTMASVKE-FEAHEDYIRSLAVHP--TFPFVLTASDDKLIKLWDWEKNWEC 136
D I+++D++ S + FE H Y+ + ++P F +AS D+ IK+W +
Sbjct: 91 DMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSS-SP 148
Query: 137 TQTFEGHSHYV-MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY 195
T EGH V ++ D S + D ++IW+ + TL+ H + ++C +
Sbjct: 149 NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASF 208
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTI 255
+ +ITGS+D TV++W T L V V + ++G+I
Sbjct: 209 H--PELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 266
Query: 256 LI 257
++
Sbjct: 267 IV 268
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 170/300 (56%), Positives = 228/300 (76%)
Query: 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRT 64
++L + K+F +SDRVK +DFHPT+PW+L +LY+G + IW+Y + + KS++VT+ PVR
Sbjct: 1 MKLDVVKQFSTRSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRA 60
Query: 65 AKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
KF+AR++WIV GSDD IRV++YNT V +FEAH DYIRS+AVHP+ P++LT+SDD
Sbjct: 61 GKFIARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLT 120
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
IKLW+W+ NW+ QTFEGH HYVM FNPKD NTFASA LD T++IW++ SS FTL
Sbjct: 121 IKLWNWDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLI 180
Query: 185 AHE-KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
AHE KG+N +DY+ +DK YLIT SDD T+KVWDY+TK+CV LEGH +NV+ FHPEL
Sbjct: 181 AHEAKGVNYVDYYPQADKPYLITSSDDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPEL 240
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
II++ SEDGTI WN+ TF+L+ +++ LER W IG SN +A G D+G +I+K+G+
Sbjct: 241 PIIVSGSEDGTIRFWNSNTFKLEKSINYSLERAWCIGILPKSNVIAAGFDSGFVIIKLGS 300
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 166/302 (54%), Positives = 223/302 (73%)
Query: 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRT 64
++L I+K F +SDRVK +DFHPT+PWVL +LYSG V +WNY +Q +S++VT++PVR
Sbjct: 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA 60
Query: 65 AKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
KF+AR++WI+ GSDD IRVF+YNT V +FEAH DYIRS+AVHPT P+VL+ SDD
Sbjct: 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
+KLW+WE NW QTFEGH H+VM AFNPKD +TFAS LD T+++W++ S FTL
Sbjct: 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180
Query: 185 A-HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
E+G+N +DY+ DK Y+IT SDD T+K+WDY+TK+CV LEGH +NV+ FHP L
Sbjct: 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIG-YKKG-SNQVAFGCDNGTLIVKI 301
III+ SEDGT+ IWN++T++++ TL+ GLER W I + G N +A G DNG ++ +
Sbjct: 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300
Query: 302 GN 303
GN
Sbjct: 301 GN 302
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 155/298 (52%), Positives = 213/298 (71%)
Query: 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRT 64
+ L +++ + ++RVK+VDFHPT+PWV+AS Y+G V IWNY++QT +S + D P+R
Sbjct: 2 MRLDFQRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRA 61
Query: 65 AKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
F+AR++W VCGSDD +RV++YNT V +FEAH DYIR+L VHPT PF+LT+SDD
Sbjct: 62 CAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMT 121
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
IK ++W+ +W+C QTFEGHS YVM A NPKD NTFAS+ LDGT+++W+ SS A FTL
Sbjct: 122 IKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQ 181
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH++G+N ++Y+ DK YLIT DD +KVWDY+TK CV+ILEGHTNNV+ FH +
Sbjct: 182 AHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFP 241
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302
III+ SEDGT+ IW+ ++ L + + L+R W I K + V G DNG + +G
Sbjct: 242 IIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDNGLITFSLG 299
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 130/290 (44%), Positives = 195/290 (67%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F+ SDRVKSVDFH +PW+L +L++G V IWNY ++T K+++V++ R AKF+ R++
Sbjct: 103 FVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKN 162
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
WI SDD+ IR+FD T + + EF AH D+IRSL VHPT P++++ASDD+ I++WDWE
Sbjct: 163 WIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWEN 222
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
W Q F+ H+HY+MQ A NP+D F S SLD T+++W + + TL+ HEKG+NC
Sbjct: 223 EWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNC 282
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG-HTNNVTAVCFHPELRIIITASE 251
++ F+T ++ ++GSDD ++ VWD +T+ C++ L+ H NNVT V P II+ +E
Sbjct: 283 VE-FLTGGRI--VSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVT--PFKTWIISGAE 337
Query: 252 DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
D T+ IWN+ TF L+ L+ R W + K S+ +A G D+G + V+I
Sbjct: 338 DSTVKIWNSQTFSLEKELNFEKGRAWCVAAGK-SDAIAVGFDSGAVTVEI 386
Score = 131 (51.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 43/181 (23%), Positives = 83/181 (45%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQ-TTEKSVKVTDSPVRTAKFVAR 70
EF SD ++S+ HPT P+++++ + +W++ ++ E+ + +
Sbjct: 186 EFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPE 245
Query: 71 E-HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+ V GS DK ++V+ S+ E HE + + T +++ SDD I +WD
Sbjct: 246 DPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFL-TGGRIVSGSDDCSICVWD 304
Query: 130 WEKNWECTQTFEG-HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ +C +T + H + V F S + D T++IWN + + + L+ EK
Sbjct: 305 IQTQ-KCIETLKNAHKNNV---TFVTPFKTWIISGAEDSTVKIWNSQTFSLEKELN-FEK 359
Query: 189 G 189
G
Sbjct: 360 G 360
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 354 (129.7 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 66/171 (38%), Positives = 105/171 (61%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F K+ RVK + FHPT+PW+LASL+SG++ +++Y +T + + PVR F +
Sbjct: 4 KFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + + H+DYIRS+ H P+++++SDD +I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT 182
C GH+HYVM + F+PKD + SASLD TI+IW++ K T
Sbjct: 124 SR-TCIAELNGHNHYVMSALFHPKD-DLVVSASLDQTIRIWDISGLKKKMT 172
Score = 230 (86.0 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 47/173 (27%), Positives = 90/173 (52%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+FE ++ L+ HPT P++L + I L+D+ + F+ H V F+
Sbjct: 4 KFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIK-TLLEKFDEHEGPVRGINFHMT 62
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
F S D I++WN FTL H+ I +++ + ++++ SDD +++
Sbjct: 63 Q-PLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFH--REAPWIVSSSDDMVIRI 119
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268
W+++++TC+ L GH + V + FHP+ ++++AS D TI IW+ + + + T
Sbjct: 120 WNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMT 172
Score = 186 (70.5 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 39/132 (29%), Positives = 67/132 (50%)
Query: 170 QIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG 229
+++ D S + +L+ H++G+N + T Y+++ SDD VK+W V G
Sbjct: 188 ELFGTDISV-RLSLEGHDRGVNWASFHPTQP--YIVSASDDHQVKLWRMNDPI-VDTFRG 243
Query: 230 HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVA 289
H NNV+ FHP +II+ SED TI +W+ + + +R W++ N A
Sbjct: 244 HYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPNQNLFA 303
Query: 290 FGCDNGTLIVKI 301
G D+G ++ K+
Sbjct: 304 AGHDSGMIVFKL 315
Score = 179 (68.1 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 36/121 (29%), Positives = 63/121 (52%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+EK F + V+ ++FH TQP ++ + +WNY + ++K +R+ +F
Sbjct: 44 LEK-FDEHEGPVRGINFHMTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFH 102
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
WIV SDD IR++++ + + E H Y+ S HP V++AS D+ I++W
Sbjct: 103 REAPWIVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIW 162
Query: 129 D 129
D
Sbjct: 163 D 163
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 46/156 (29%), Positives = 72/156 (46%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V S FHP V+++ T+ IW+ K T P R E+ + D
Sbjct: 138 VMSALFHPKDDLVVSASLDQTIRIWDISGL---KKKMTTVKPYR-------ENDPMRLQD 187
Query: 80 DKFIRVFDYNTMASVK-EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
+ F T SV+ E H+ + + HPT P++++ASDD +KLW N
Sbjct: 188 ELF------GTDISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLW--RMNDPIVD 239
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
TF GH + V + F+P+ + S S D TI++W++
Sbjct: 240 TFRGHYNNVSCALFHPRQ-DLIISNSEDKTIRVWDI 274
Score = 121 (47.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
+ EGH V ++F+P SAS D +++W M+ T H ++C +
Sbjct: 199 SLEGHDRGVNWASFHPTQ-PYIVSASDDHQVKLWRMNDPIVD-TFRGHYNNVSCALFHPR 256
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
D + I+ S+D T++VWD K+ V ++ + + HP + + G I+
Sbjct: 257 QDLI--ISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPNQNLFAAGHDSGMIV 312
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 341 (125.1 bits), Expect = 9.9e-47, Sum P(2) = 9.9e-47
Identities = 63/169 (37%), Positives = 102/169 (60%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS+RVK + FHP +PW+LASL+SG + +W+Y T + PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR++ H +P++++ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
C GH+HYVM ++F+PK+ + SASLD T+++W++ + K
Sbjct: 124 SR-TCVSVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKK 170
Score = 243 (90.6 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 51/176 (28%), Positives = 94/176 (53%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAF-NP 154
+FE + ++ L+ HP P++L + +I+LWD+ F+ H V F N
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMG-TLIDRFDEHEGPVRGVHFHNS 62
Query: 155 KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVK 214
+ L F S D I++WN + FTL H I + + + ++++ SDD T++
Sbjct: 63 QPL--FVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFH--HEYPWIVSASDDQTIR 118
Query: 215 VWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS 270
+W+++++TCV +L GH + V FHP+ ++++AS D T+ +W+ R + T+S
Sbjct: 119 IWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVS 173
Score = 191 (72.3 bits), Expect = 9.9e-47, Sum P(2) = 9.9e-47
Identities = 43/124 (34%), Positives = 69/124 (55%)
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAV 237
K+ L+ H++G+N + T + ++G+DD VK+W ETK V L GH NNV++V
Sbjct: 197 KYVLEGHDRGVNWAAFHPTLPLI--VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSV 254
Query: 238 CFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
FH + II++ SED +I +W+AT T +R W + N +A G D+G +
Sbjct: 255 MFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAGHDSGMI 314
Query: 298 IVKI 301
+ K+
Sbjct: 315 VFKL 318
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/156 (25%), Positives = 70/156 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V FHP + V+++ TV +W+ + +K+V D +R + + + G
Sbjct: 138 VMCASFHPKEDLVVSASLDQTVRVWDIGA-LRKKTVSPADDIMRLTQMNSD----LFGGV 192
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE--KNWECT 137
D ++ E H+ + A HPT P +++ +DD+ +KLW K WE
Sbjct: 193 DAIVKYV----------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-V 241
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
T GH + V F+ K + S S D +I++W+
Sbjct: 242 DTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWD 276
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 398 (145.2 bits), Expect = 9.8e-36, P = 9.8e-36
Identities = 86/249 (34%), Positives = 136/249 (54%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS R K + FHP +PW+L SL+S T+ +W+Y T + D PVR F +
Sbjct: 4 KFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHPTQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y T + H DY+R++ HP P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQ 123
Query: 132 -KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
++ CT T GH+HYVM + F+P + + ASASLD +++IW++ K + +
Sbjct: 124 NRSLICTMT--GHNHYVMCAQFHPTE-DLIASASLDQSVRIWDISGLRKKHSAPTT---M 177
Query: 191 NCIDYFITSDKVYL-ITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
+ D ++ + G+ D VK +LEGH V V FHP L +I++A
Sbjct: 178 SFEDQMARANNAQADMFGNTDAVVKF----------VLEGHDRGVNWVAFHPSLPLIVSA 227
Query: 250 SEDGTILIW 258
+D I +W
Sbjct: 228 GDDRLIKLW 236
Score = 293 (108.2 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 76/291 (26%), Positives = 131/291 (45%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F + V+ +DFHPTQP ++ + +WNY ++ ++ VRT F
Sbjct: 47 FEEHDGPVRGIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELP 106
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
WI+ SDD+ IR++++ + + H Y+ HPT + +AS D+ +++WD
Sbjct: 107 WILSASDDQTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWD--- 163
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ + HS S + A A + G N D+ KF L+ H++G+N
Sbjct: 164 ---ISGLRKKHSAPTTMSFEDQMARANNAQADMFG-----NTDA-VVKFVLEGHDRGVNW 214
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITAS 250
+ + + + ++ DD +K+W +TK V GH N +A FHP +I++
Sbjct: 215 VAFHPSLPLI--VSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLFHPHQDLILSVG 272
Query: 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
ED TI W+ + ++R W I N A G D G ++ K+
Sbjct: 273 EDKTIRAWDLNKRTPVQSFKRDVDRFWVIAAHPEINLFAAGHDTGVMVFKL 323
Score = 220 (82.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 46/173 (26%), Positives = 87/173 (50%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+FE+ + +A HP P++L + I+LWD+ FE H V F+P
Sbjct: 4 KFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMG-TLIDRFEEHDGPVRGIDFHPT 62
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
F S D I++WN + FTL+ H + + F + ++++ SDD T+++
Sbjct: 63 Q-PLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTV--FFHPELPWILSASDDQTIRI 119
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268
W+++ ++ + + GH + V FHP +I +AS D ++ IW+ + R +++
Sbjct: 120 WNWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGLRKKHS 172
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 388 (141.6 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 82/252 (32%), Positives = 132/252 (52%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F KS RVK + FHP +PW+L SL+SG + +W+Y T + D PVR F +
Sbjct: 5 FESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMP 64
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
V G DD I+V++Y + AH DY+R++A H +P++L+ASDD+ I++W+W+
Sbjct: 65 LFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQS 124
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
C GH+HYVM + F+P + + SASLD T+++W++ S K + G++
Sbjct: 125 R-NCICVLTGHNHYVMCAQFHPTE-DQIVSASLDQTVRVWDI-SGLRKKNVAPGPGGLD- 180
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
D+ + G D VK +LEGH FHP L +I++ ++D
Sbjct: 181 -DHLKGHPGATDLFGQADAVVK----------HVLEGHDRGFNWASFHPTLPLIVSGADD 229
Query: 253 GTILIWNATTFR 264
+ +W ++
Sbjct: 230 RLVKLWRMNEYK 241
Score = 270 (100.1 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 77/295 (26%), Positives = 129/295 (43%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+EK F + V+ V FH P ++ + +WNY + ++ VRT F
Sbjct: 44 LEK-FDEHDGPVRGVAFHQQMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFH 102
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
WI+ SDD+ IR++++ + + H Y+ HPT +++AS D+ +++W
Sbjct: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVW 162
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
D G A P L+ G ++ + K L+ H++
Sbjct: 163 D----------ISGLRK--KNVAPGPGGLDDHLKGH-PGATDLFGQADAVVKHVLEGHDR 209
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRII 246
G N + T + ++G+DD VK+W E K V GH NNV++V FHP +I
Sbjct: 210 GFNWASFHPTLPLI--VSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLFHPRQDLI 267
Query: 247 ITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
++ ED +I +W+ T + T ER W + N A G D G ++ K+
Sbjct: 268 LSNGEDRSIRVWDMTKRQCLFTFRRDNERFWILTAHPTLNLFAAGHDGGMVVFKL 322
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 385 (140.6 bits), Expect = 2.4e-34, P = 2.4e-34
Identities = 84/259 (32%), Positives = 136/259 (52%)
Query: 7 LQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAK 66
+++ +F +S R K V FHPTQPW+L SL++G + +W+Y T D PVR
Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIA 60
Query: 67 FVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIK 126
F + V G DD + V++Y + + H DY+R H +P++L+ SDD+ I+
Sbjct: 61 FHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIR 120
Query: 127 LWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS----SAAKFT 182
+W+W+ C GHSHYVM +AF+P + + SASLD T+++W++ +AA +
Sbjct: 121 IWNWQSR-NCIAILTGHSHYVMCAAFHPSE-DLIVSASLDQTVRVWDISGLRMKNAAPVS 178
Query: 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
+ ++ + I++D + GS D VK +LEGH V FHP
Sbjct: 179 MSLEDQLAQAHNS-ISND----LFGSTDAIVKF----------VLEGHDRGVNWCAFHPT 223
Query: 243 LRIIITASEDGTILIWNAT 261
L +I++A +D + +W T
Sbjct: 224 LPLILSAGDDRLVKLWRMT 242
Score = 285 (105.4 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 76/295 (25%), Positives = 129/295 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V+ + FHPTQP ++ V +WNY S+ S+ VR F WI+ SD
Sbjct: 56 VRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSD 115
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ IR++++ + + H Y+ A HP+ +++AS D+ +++WD
Sbjct: 116 DQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWD---------- 165
Query: 140 FEG-HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
G + + +D A S+ ++ + KF L+ H++G+N + T
Sbjct: 166 ISGLRMKNAAPVSMSLEDQLAQAHNSISN--DLFGSTDAIVKFVLEGHDRGVNWCAFHPT 223
Query: 199 SDKVYLITGSDDFTVKVWDYETKTC--VQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+ ++ DD VK+W V GH NNV+ FHP +I++ASED TI
Sbjct: 224 LPLI--LSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIR 281
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
+W+ T +R W I N A D+G ++ K+ ++N
Sbjct: 282 VWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAAAHDSGVMVFKLERERPAHALN 336
Score = 271 (100.5 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 62/212 (29%), Positives = 110/212 (51%)
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQS 150
M + +FE+ + +A HPT P++LT+ + I+LWD+ F+GH V
Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMG-TLLDRFDGHDGPVRGI 59
Query: 151 AFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDD 210
AF+P F S D + +WN S F+L H + + + ++++ SDD
Sbjct: 60 AFHPTQ-PLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFH--HEYPWILSCSDD 116
Query: 211 FTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT-- 268
T+++W+++++ C+ IL GH++ V FHP +I++AS D T+ +W+ + R++N
Sbjct: 117 QTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAP 176
Query: 269 LSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300
+S LE + + SN + FG + IVK
Sbjct: 177 VSMSLEDQLAQAHNSISNDL-FGSTDA--IVK 205
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 368 (134.6 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 80/249 (32%), Positives = 128/249 (51%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS R K V FHP +PW L SL+S T+ +W+Y T + PVR+ F +
Sbjct: 6 KFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQ 65
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V+ NT + H DYIR ++ H P++++ SDD+ I++W+W+
Sbjct: 66 PLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQ 125
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
E GH+HYVM + F+P + + SASLD T+++W++ K + A +
Sbjct: 126 NRQEIA-CLTGHNHYVMSAQFHPSE-DLIVSASLDQTVRVWDISGLRKKHS--APTSSVR 181
Query: 192 CIDYFITSDKVYL--ITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
+ + ++ I G+ + VK Y +LEGH V FHP L +I++A
Sbjct: 182 AFEDQLQRQQLPQQDIFGNINAVVK---Y-------VLEGHDKGVNYASFHPTLPLIVSA 231
Query: 250 SEDGTILIW 258
+D + +W
Sbjct: 232 GDDRVVKLW 240
Score = 271 (100.5 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 76/291 (26%), Positives = 134/291 (46%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH---WIVC 76
V+SVDFHPTQP ++ T+ +W S T K + + + + V+ H WI+
Sbjct: 56 VRSVDFHPTQPLFVSGGDDYTIKVW---SLNTRKCIFTLNGHLDYIRGVSFHHDLPWIIS 112
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW----EK 132
SDD+ IR++++ + H Y+ S HP+ +++AS D+ +++WD +K
Sbjct: 113 CSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLRKK 172
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ T + + + +D+ F G I ++ K+ L+ H+KG+N
Sbjct: 173 HSAPTSSVRAFEDQLQRQQLPQQDI--F------GNI------NAVVKYVLEGHDKGVNY 218
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITAS 250
+ T + ++ DD VK+W +TK V GHT NV + FHP +I++ S
Sbjct: 219 ASFHPTLPLI--VSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVS 276
Query: 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
+D TI +W+ +R W I + A D+G ++ K+
Sbjct: 277 DDKTIRVWDLNKRVPVKQFRREHDRFWLIASHPTISLFAACHDSGIMVFKL 327
Score = 233 (87.1 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 51/187 (27%), Positives = 95/187 (50%)
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQS 150
M + +FE+ + +A HP P+ L + I+LWD+ FE H V
Sbjct: 1 MKMLTKFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMG-TLIDRFEDHVGPVRSV 59
Query: 151 AFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDD 210
F+P F S D TI++W++++ FTL+ H I + + D ++I+ SDD
Sbjct: 60 DFHPTQ-PLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFH--HDLPWIISCSDD 116
Query: 211 FTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS 270
T+++W+++ + + L GH + V + FHP +I++AS D T+ +W+ + R +++
Sbjct: 117 QTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLRKKHSAP 176
Query: 271 SGLERVW 277
+ R +
Sbjct: 177 TSSVRAF 183
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 362 (132.5 bits), Expect = 6.9e-32, P = 6.9e-32
Identities = 81/248 (32%), Positives = 132/248 (53%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS R K + FHP++PWVL +L+S T+ +W+Y T + + PVR F +
Sbjct: 6 KFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQ 65
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V DD I+V+ +T + H DY+R++ H P++++ASDD+ I++W+W+
Sbjct: 66 PIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQ 125
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
E GH+H+VM + F+P D + SASLD TI+IW++ + + G +
Sbjct: 126 NRKEIA-CLTGHNHFVMCAQFHPTD-DLIVSASLDETIRIWDISGLRKRHSAP----GTS 179
Query: 192 CIDYFITSDKVYLITGS-DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS 250
+ +++ + L+ GS D VK ILEGHT V FHP L +I++ S
Sbjct: 180 SFEEQMSAQQ-NLLDGSLGDCVVKF----------ILEGHTRGVNWASFHPTLPLIVSGS 228
Query: 251 EDGTILIW 258
+D + +W
Sbjct: 229 DDRQVKLW 236
Score = 298 (110.0 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 79/294 (26%), Positives = 133/294 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V+ +DFHPTQP +++ T+ +W+ + ++ VRT F WI+ SD
Sbjct: 56 VRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASD 115
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ IR++++ + H ++ HPT +++AS D+ I++WD +
Sbjct: 116 DQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDIS-GLRKRHS 174
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
G S + Q + ++L LDG++ KF L+ H +G+N + T
Sbjct: 175 APGTSSFEEQMSAQ-QNL-------LDGSL-----GDCVVKFILEGHTRGVNWASFHPTL 221
Query: 200 DKVYLITGSDDFTVKVWDYE-TKTC-VQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
+ ++GSDD VK+W TK V GHTNNV +V FHP +II+ ED T+ +
Sbjct: 222 PLI--VSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRV 279
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
W+ +R W I N D+G ++ K+ C ++
Sbjct: 280 WDLDKRTPVKQFKRENDRFWLIAAHPHINLFGAAHDSGIMVFKLDRERPCSFIH 333
Score = 246 (91.7 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 54/178 (30%), Positives = 94/178 (52%)
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQS 150
M + +FE+ + +A HP+ P+VL A I+LWD+ FE H V
Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMG-TLLHRFEDHEGPVRGL 59
Query: 151 AFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDD 210
F+P F SA D TI++W++D++ +TL H + + F + ++I+ SDD
Sbjct: 60 DFHPTQ-PIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTV--FFHRELPWIISASDD 116
Query: 211 FTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268
T+++W+++ + + L GH + V FHP +I++AS D TI IW+ + R +++
Sbjct: 117 QTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHS 174
Score = 119 (46.9 bits), Expect = 0.00085, P = 0.00085
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
T+++WDY T + E H V + FHP I ++A +D TI +W+ T + TL+
Sbjct: 34 TIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTG 93
Query: 272 GLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVNC 312
L+ V ++ + + + D+ T ++I N + C
Sbjct: 94 HLDYVRTVFFHRELPWIISASDDQT--IRIWNWQNRKEIAC 132
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 361 (132.1 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 94/284 (33%), Positives = 149/284 (52%)
Query: 20 VKSVDF-HPTQPWVLASLYS-GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG 77
VKSV F H ++ +LAS GTV IW+ + T ++ +K + VR+ F I G
Sbjct: 308 VKSVVFSHDSR--LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASG 365
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT 137
S+D+ +R+++ T FE HED + +++ + +ASD +K+WD +
Sbjct: 366 SNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD-TRTGSLQ 424
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
EGH V +F+P D ASAS D T++IW+ + + + TL+ H + + +
Sbjct: 425 NVLEGHDDCVNSVSFSP-DSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVF-- 481
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
+ D + + SDD TVK+WD T LE H N V +V F + R++ +AS+D T+ I
Sbjct: 482 SHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKI 541
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
W+ T L+NTL +RV S+ + S +A D+GT VKI
Sbjct: 542 WDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGT--VKI 583
Score = 352 (129.0 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 84/285 (29%), Positives = 140/285 (49%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+SV F + + TV IW + + + + V F +
Sbjct: 347 NDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLAS 406
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
SD ++++D T + E H+D + S++ P + +ASDD+ +K+W
Sbjct: 407 ASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWH-AATGSL 465
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+T EGH+ +V F+ D ASAS D T++IW+ + + L++H+ + + +
Sbjct: 466 QRTLEGHNDWVRSVVFS-HDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVF- 523
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+ D L + SDD TVK+WD T + LEGH + V +V F P+ R++ +AS+DGT+
Sbjct: 524 -SHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVK 582
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
IW A T +Q+T S+ + SN +A D+GT VKI
Sbjct: 583 IWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGT--VKI 625
Score = 318 (117.0 bits), Expect = 6.4e-27, P = 6.4e-27
Identities = 87/291 (29%), Positives = 148/291 (50%)
Query: 18 DR-VKSVDF-HPTQPWVLASLYS-GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWI 74
DR V SV F H ++ +LAS GTV IW+ + + +++ + V++ F +
Sbjct: 263 DRAVGSVSFSHDSR--LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 75 VCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW 134
SDD ++++D T + + H D +RS+ + + S+D+ +++W+
Sbjct: 321 ASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGL 380
Query: 135 ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID 194
TFE H VM +F D ASAS G ++IW+ + + + L+ H+ +N +
Sbjct: 381 -LRHTFEDHEDSVMAVSF-AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVS 438
Query: 195 YFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGT 254
+ + D L + SDD TVK+W T + + LEGH + V +V F + R+I +AS+D T
Sbjct: 439 F--SPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMT 496
Query: 255 ILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305
+ IW+ T LQN L S V S+ + S +A D+ T VKI +++
Sbjct: 497 VKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMT--VKIWDTA 545
Score = 290 (107.1 bits), Expect = 6.1e-24, P = 6.1e-24
Identities = 74/278 (26%), Positives = 132/278 (47%)
Query: 2 ETPLELQIEKEFIQKSDRVKSVDF-HPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS 60
ET L + F D V +V F H ++ AS G V IW+ + + + ++ D
Sbjct: 375 ETTTGL-LRHTFEDHEDSVMAVSFAHDSRRLASAS-DGGNVKIWDTRTGSLQNVLEGHDD 432
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
V + F + SDD+ ++++ T + + E H D++RS+ + +AS
Sbjct: 433 CVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASAS 492
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
DD +K+WD E H ++V F+ D ASAS D T++IW+ + + +
Sbjct: 493 DDMTVKIWD-TATVPLQNNLESHDNWVRSVVFS-HDSRLLASASDDMTVKIWDTATGSLE 550
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
TL+ H+ +N + + + D L + SDD TVK+W T T +G ++ F
Sbjct: 551 NTLEGHDDRVNSVSF--SPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFS 608
Query: 241 PELRIIITASEDGTILIWNATTFRLQNT--LSSGLERV 276
++ +A +DGT+ IW+ + L++T L ++R+
Sbjct: 609 HTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHEIQRI 646
Score = 259 (96.2 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 65/233 (27%), Positives = 116/233 (49%)
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
W + G ++V+ + S +F+ H+ + S++ + +AS D +K+WD
Sbjct: 235 WNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTAT 294
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
++ T EGH+ +V F+ D ASAS DGT++IW+ + + L H +
Sbjct: 295 SF-LQNTLEGHNEWVKSVVFS-HDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRS 352
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + D + +GS+D TV++W+ T E H ++V AV F + R + +AS+
Sbjct: 353 VVF--SHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDG 410
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305
G + IW+ T LQN L + V S+ + S +A D+ T VKI +++
Sbjct: 411 GNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRT--VKIWHAA 461
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 356 (130.4 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 86/298 (28%), Positives = 155/298 (52%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKF 67
++++ S V+SV F P + +S T+ +WN + ++S++ V++ F
Sbjct: 867 ELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAF 926
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
+ GS+ +++++ T ++ E H +RS+A P + ++S D IKL
Sbjct: 927 SPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKL 986
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
W+ E QTF+GH ++ AF+P D S S D TI++W++ +S + +L+ H
Sbjct: 987 WN-STTGELQQTFKGHDLWIRAVAFSP-DGKHLVSGSDDNTIKLWDLATSELQQSLEDHS 1044
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+ ++ + F DK L + S D T+K+WD T + LEGH+ V +V F P+ +++
Sbjct: 1045 RSVHAVA-FSPDDK-QLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLA 1102
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305
+ S DGTI +WN T LQ TL+ + V S+ + Q+A G + T +K+ +S+
Sbjct: 1103 SNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDST--IKLWDSA 1158
Score = 336 (123.3 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 85/278 (30%), Positives = 139/278 (50%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V+SV F P +++ Y TV IW+ + +++ V + F + GS
Sbjct: 753 VESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSY 812
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I ++D T ++ FE H I S+A P + +ASDD IK+WD E QT
Sbjct: 813 DNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATG-ELQQT 871
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
+ HS V AF+P D AS+SLD TI++WN + + +L+ + + + +
Sbjct: 872 LDSHSQSVRSVAFSP-DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAF--SP 928
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D L +GS+ TVK+W+ T +Q LEGH+ +V +V F P+ + + ++S D TI +WN
Sbjct: 929 DGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN 988
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
+TT LQ T + ++ + + G D+ T+
Sbjct: 989 STTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTI 1026
Score = 329 (120.9 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 83/262 (31%), Positives = 128/262 (48%)
Query: 44 WNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDY 103
W+ QT E + PV + F +V GS D ++++D T ++ + H
Sbjct: 739 WSAEQQTLENHL----GPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGT 794
Query: 104 IRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASA 163
+ SLA P + + S D I LWD E QTFEGH H + AF P D ASA
Sbjct: 795 VESLAFSPDGKLLASGSYDNTIDLWD-SATGELLQTFEGHPHSIWSVAFAP-DGKELASA 852
Query: 164 SLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC 223
S D TI+IW++ + + TLD+H + + + + + D L + S D T+KVW+ T
Sbjct: 853 SDDSTIKIWDLATGELQQTLDSHSQSVRSVAF--SPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 224 VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK 283
Q LEG + V +V F P+ + + + SE T+ +WN T L TL + V S+ +
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP 970
Query: 284 GSNQVAFGCDNGTLIVKIGNSS 305
Q+A + T +K+ NS+
Sbjct: 971 DGKQLASSSSDTT--IKLWNST 990
Score = 328 (120.5 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 83/282 (29%), Positives = 140/282 (49%)
Query: 22 SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDK 81
SV F P + ++ T+ IW+ + ++++ VR+ F + S D
Sbjct: 839 SVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDS 898
Query: 82 FIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE 141
I+V++ T + E +++S+A P + + S+ +KLW+ E QT E
Sbjct: 899 TIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN-PATGELLQTLE 957
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GHS V AF+P D AS+S D TI++WN + + T H+ I + + + D
Sbjct: 958 GHSQSVRSVAFSP-DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAF--SPDG 1014
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+L++GSDD T+K+WD T Q LE H+ +V AV F P+ + + ++S D TI +W++
Sbjct: 1015 KHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSA 1074
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
T LQ TL + V S+ + +A +GT +K+ N
Sbjct: 1075 TGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGT--IKLWN 1114
Score = 325 (119.5 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 82/288 (28%), Positives = 144/288 (50%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
P ++++ +S VKSV F P + + TV +WN + ++++ VR
Sbjct: 905 PATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVR 964
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+ F + S D I++++ T + F+ H+ +IR++A P +++ SDD
Sbjct: 965 SVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDN 1024
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
IKLWD + E Q+ E HS V AF+P D AS+SLD TI++W+ + + TL
Sbjct: 1025 TIKLWDLATS-ELQQSLEDHSRSVHAVAFSPDD-KQLASSSLDSTIKLWDSATGELQRTL 1082
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ H +G+ + + + D L + S D T+K+W+ T Q L G ++ V +V F P+
Sbjct: 1083 EGHSQGVRSVTF--SPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDG 1140
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+ + + D TI +W++ T L TL +R+ S+ + +A G
Sbjct: 1141 KQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASG 1188
Score = 300 (110.7 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 78/291 (26%), Positives = 138/291 (47%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP--VRTAKFVAREHWI 74
S V+S+ F P + + Y T+ +W+ S T E P + + F +
Sbjct: 792 SGTVESLAFSPDGKLLASGSYDNTIDLWD--SATGELLQTFEGHPHSIWSVAFAPDGKEL 849
Query: 75 VCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW 134
SDD I+++D T + ++H +RS+A P + ++S D IK+W+
Sbjct: 850 ASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN-PATG 908
Query: 135 ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID 194
E Q+ EG S +V AF+P D AS S T+++WN + TL+ H + + +
Sbjct: 909 ELQQSLEGRSGWVKSVAFSP-DGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVA 967
Query: 195 YFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGT 254
+ + D L + S D T+K+W+ T Q +GH + AV F P+ + +++ S+D T
Sbjct: 968 F--SPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNT 1025
Query: 255 ILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305
I +W+ T LQ +L V ++ + Q+A + T +K+ +S+
Sbjct: 1026 IKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDST--IKLWDSA 1074
Score = 291 (107.5 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 75/270 (27%), Positives = 128/270 (47%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+++V F P +++ T+ +W+ + ++S++ V F + + S
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL 1064
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D T + E H +RS+ P + + S D IKLW+ E QT
Sbjct: 1065 DSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN-PLTGELQQT 1123
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
G S +V AF+P D AS D TI++W+ + TL+ H I + + +
Sbjct: 1124 LTGRSDWVDSVAFSP-DGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVF--SP 1180
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D L +GS D T K+WD T +QI EGH+ V +V F P+ +++ ++S TI +W+
Sbjct: 1181 DGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVA 289
T L TL+ E S+ + N++A
Sbjct: 1241 PVTGELLQTLNDPDESAGSVAFSPDGNRLA 1270
Score = 226 (84.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 60/224 (26%), Positives = 107/224 (47%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKF 67
++++ S V+SV F P + ++ Y GT+ +WN + ++++ V + F
Sbjct: 1077 ELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAF 1136
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
+ G D I+++D T ++ E H D I+S+ P + + S D+ KL
Sbjct: 1137 SPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKL 1196
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD E Q FEGHS +V AF+P D AS+S TI++W+ + TL+ +
Sbjct: 1197 WD-PATGELLQIFEGHSKWVESVAFSP-DGKLLASSSYGETIKLWDPVTGELLQTLNDPD 1254
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ + + +++ + D F K+WD T +Q L+GH+
Sbjct: 1255 ESAGSVAFSPDGNRLASV---DIFDTKIWDPATGELLQALKGHS 1295
Score = 222 (83.2 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 55/174 (31%), Positives = 86/174 (49%)
Query: 131 EKNWECTQ-TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E+ W Q T E H V F+P D S S D T++IW+ + TLD H
Sbjct: 736 EQTWSAEQQTLENHLGPVESVVFSP-DGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGT 794
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
+ + + + D L +GS D T+ +WD T +Q EGH +++ +V F P+ + + +A
Sbjct: 795 VESLAF--SPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASA 852
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
S+D TI IW+ T LQ TL S + V S+ + +A + T +K+ N
Sbjct: 853 SDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDST--IKVWN 904
Score = 178 (67.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%)
Query: 164 SLDGTIQIWNMDS--SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK 221
+L G Q+ ++ SA + TL+ H + + + + D L++GS D TVK+WD T
Sbjct: 725 NLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVF--SPDGKQLVSGSYDDTVKIWDPATG 782
Query: 222 TCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGY 281
+Q L+GH+ V ++ F P+ +++ + S D TI +W++ T L T +WS+ +
Sbjct: 783 ELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAF 842
Query: 282 KKGSNQVAFGCDNGTL 297
++A D+ T+
Sbjct: 843 APDGKELASASDDSTI 858
Score = 155 (59.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 46/187 (24%), Positives = 84/187 (44%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL ++++ +SD V SV F P + + Y T+ +W+ + ++++ ++
Sbjct: 1115 PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQ 1174
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+ F + GS D+ +++D T ++ FE H ++ S+A P + ++S +
Sbjct: 1175 SVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGE 1234
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
IKLWD E QT AF+P D N AS + T +IW+ + L
Sbjct: 1235 TIKLWD-PVTGELLQTLNDPDESAGSVAFSP-DGNRLASVDIFDT-KIWDPATGELLQAL 1291
Query: 184 DAHEKGI 190
H K +
Sbjct: 1292 KGHSKWV 1298
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 351 (128.6 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 71/195 (36%), Positives = 110/195 (56%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+LASL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF----TLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +D
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVDTEV 181
Query: 188 KGINCIDYFITSDKV 202
+GI+ +D F SD V
Sbjct: 182 RGISGVDLFGASDAV 196
Score = 277 (102.6 bits), Expect = 8.3e-23, P = 8.3e-23
Identities = 75/296 (25%), Positives = 138/296 (46%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
I+K F + V+ +DFH QP ++ + +WNY + ++ +RT F
Sbjct: 44 IDK-FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH 102
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
WI+ SDD+ IR++++ + V H Y+ HP+ V++AS D+ +++W
Sbjct: 103 HEYPWILSASDDQTIRIWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHE 187
D G + + +P ++T + G + ++ + K L+ H+
Sbjct: 163 D----------ISG----LRKKNLSPGAVDTEVRG-ISG-VDLFGASDAVVKHVLEQGHD 206
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRI 245
+G+N + + + ++G+DD VK+W E+K + GH NNV+ FHP +
Sbjct: 207 RGVNWAAFHPSMPLI--VSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFHPRQEL 264
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
I++ SED +I +W+ + T +R W +G N A G D+G L+ K+
Sbjct: 265 ILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAHPNLNLFAAGHDSGMLVFKL 320
Score = 242 (90.2 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 55/179 (30%), Positives = 94/179 (52%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFN 153
+FE ++ L+ HP P++L + + +I+LWD+ CT F+ H V F+
Sbjct: 4 KFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRM---CTLIDKFDEHDGPVRGIDFH 60
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
K F S D I++WN FTL H I F + ++++ SDD T+
Sbjct: 61 -KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
++W+++++TCV +L GH + V FHP ++++AS D T+ +W+ + R +N LS G
Sbjct: 118 RIWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN-LSPG 175
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 347 (127.2 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 71/204 (34%), Positives = 115/204 (56%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF----TLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV--YLITGSD 209
+GI +D F T+D V +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 280 (103.6 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 75/292 (25%), Positives = 128/292 (43%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F + V+ +DFH QP ++ + +WNY + ++ +RT F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 105
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
WI+ SDD+ IRV+++ + V H Y+ HP+ V++AS D+ +++WD
Sbjct: 106 PWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD-- 163
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
G + D+ L GT + K L+ H++G+N
Sbjct: 164 --------ISGLRKKNLSPGAVESDVRGITGVDLFGTTD------AVVKHVLEGHDRGVN 209
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITA 249
+ T + ++G+DD VK+W E+K V GH NNV+ FHP +I++
Sbjct: 210 WAAFHPTMPLI--VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSN 267
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
SED +I +W+ + T +R W + N A G D G ++ K+
Sbjct: 268 SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKL 319
Score = 248 (92.4 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFN 153
+FE ++ L+ HP P++LT+ + +I+LWD+ CT F+ H V F+
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRM---CTLIDKFDEHDGPVRGIDFH 60
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
K F S D I++WN FTL H I F + ++++ SDD T+
Sbjct: 61 -KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
+VW+++++TCV +L GH + V FHP ++++AS D T+ +W+ + R +N LS G
Sbjct: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN-LSPG 175
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 347 (127.2 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 71/204 (34%), Positives = 115/204 (56%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF----TLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV--YLITGSD 209
+GI +D F T+D V +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 280 (103.6 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 75/292 (25%), Positives = 128/292 (43%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F + V+ +DFH QP ++ + +WNY + ++ +RT F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 105
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
WI+ SDD+ IRV+++ + V H Y+ HP+ V++AS D+ +++WD
Sbjct: 106 PWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD-- 163
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
G + D+ L GT + K L+ H++G+N
Sbjct: 164 --------ISGLRKKNLSPGAVESDVRGITGVDLFGTTD------AVVKHVLEGHDRGVN 209
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITA 249
+ T + ++G+DD VK+W E+K V GH NNV+ FHP +I++
Sbjct: 210 WAAFHPTMPLI--VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSN 267
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
SED +I +W+ + T +R W + N A G D G ++ K+
Sbjct: 268 SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKL 319
Score = 248 (92.4 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFN 153
+FE ++ L+ HP P++LT+ + +I+LWD+ CT F+ H V F+
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRM---CTLIDKFDEHDGPVRGIDFH 60
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
K F S D I++WN FTL H I F + ++++ SDD T+
Sbjct: 61 -KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
+VW+++++TCV +L GH + V FHP ++++AS D T+ +W+ + R +N LS G
Sbjct: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN-LSPG 175
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 347 (127.2 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 71/204 (34%), Positives = 115/204 (56%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF----TLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV--YLITGSD 209
+GI +D F T+D V +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 280 (103.6 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 75/292 (25%), Positives = 128/292 (43%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F + V+ +DFH QP ++ + +WNY + ++ +RT F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 105
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
WI+ SDD+ IRV+++ + V H Y+ HP+ V++AS D+ +++WD
Sbjct: 106 PWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD-- 163
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
G + D+ L GT + K L+ H++G+N
Sbjct: 164 --------ISGLRKKNLSPGAVESDVRGITGVDLFGTTD------AVVKHVLEGHDRGVN 209
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITA 249
+ T + ++G+DD VK+W E+K V GH NNV+ FHP +I++
Sbjct: 210 WAAFHPTMPLI--VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSN 267
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
SED +I +W+ + T +R W + N A G D G ++ K+
Sbjct: 268 SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKL 319
Score = 248 (92.4 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFN 153
+FE ++ L+ HP P++LT+ + +I+LWD+ CT F+ H V F+
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRM---CTLIDKFDEHDGPVRGIDFH 60
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
K F S D I++WN FTL H I F + ++++ SDD T+
Sbjct: 61 -KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
+VW+++++TCV +L GH + V FHP ++++AS D T+ +W+ + R +N LS G
Sbjct: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN-LSPG 175
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 347 (127.2 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 71/204 (34%), Positives = 115/204 (56%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF----TLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV--YLITGSD 209
+GI +D F T+D V +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 280 (103.6 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 75/292 (25%), Positives = 128/292 (43%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F + V+ +DFH QP ++ + +WNY + ++ +RT F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 105
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
WI+ SDD+ IRV+++ + V H Y+ HP+ V++AS D+ +++WD
Sbjct: 106 PWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD-- 163
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
G + D+ L GT + K L+ H++G+N
Sbjct: 164 --------ISGLRKKNLSPGAVESDVRGITGVDLFGTTD------AVVKHVLEGHDRGVN 209
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITA 249
+ T + ++G+DD VK+W E+K V GH NNV+ FHP +I++
Sbjct: 210 WAAFHPTMPLI--VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSN 267
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
SED +I +W+ + T +R W + N A G D G ++ K+
Sbjct: 268 SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKL 319
Score = 248 (92.4 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFN 153
+FE ++ L+ HP P++LT+ + +I+LWD+ CT F+ H V F+
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRM---CTLIDKFDEHDGPVRGIDFH 60
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
K F S D I++WN FTL H I F + ++++ SDD T+
Sbjct: 61 -KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
+VW+++++TCV +L GH + V FHP ++++AS D T+ +W+ + R +N LS G
Sbjct: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN-LSPG 175
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 347 (127.2 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 71/204 (34%), Positives = 115/204 (56%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF----TLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV--YLITGSD 209
+GI +D F T+D V +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 280 (103.6 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 75/292 (25%), Positives = 128/292 (43%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F + V+ +DFH QP ++ + +WNY + ++ +RT F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 105
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
WI+ SDD+ IRV+++ + V H Y+ HP+ V++AS D+ +++WD
Sbjct: 106 PWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD-- 163
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
G + D+ L GT + K L+ H++G+N
Sbjct: 164 --------ISGLRKKNLSPGAVESDVRGITGVDLFGTTD------AVVKHVLEGHDRGVN 209
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITA 249
+ T + ++G+DD VK+W E+K V GH NNV+ FHP +I++
Sbjct: 210 WAAFHPTMPLI--VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSN 267
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
SED +I +W+ + T +R W + N A G D G ++ K+
Sbjct: 268 SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKL 319
Score = 248 (92.4 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFN 153
+FE ++ L+ HP P++LT+ + +I+LWD+ CT F+ H V F+
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRM---CTLIDKFDEHDGPVRGIDFH 60
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
K F S D I++WN FTL H I F + ++++ SDD T+
Sbjct: 61 -KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
+VW+++++TCV +L GH + V FHP ++++AS D T+ +W+ + R +N LS G
Sbjct: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN-LSPG 175
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 347 (127.2 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 71/204 (34%), Positives = 115/204 (56%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF----TLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV--YLITGSD 209
+GI +D F T+D V +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 280 (103.6 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 75/292 (25%), Positives = 128/292 (43%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F + V+ +DFH QP ++ + +WNY + ++ +RT F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 105
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
WI+ SDD+ IRV+++ + V H Y+ HP+ V++AS D+ +++WD
Sbjct: 106 PWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD-- 163
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
G + D+ L GT + K L+ H++G+N
Sbjct: 164 --------ISGLRKKNLSPGAVESDVRGITGVDLFGTTD------AVVKHVLEGHDRGVN 209
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITA 249
+ T + ++G+DD VK+W E+K V GH NNV+ FHP +I++
Sbjct: 210 WAAFHPTMPLI--VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSN 267
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
SED +I +W+ + T +R W + N A G D G ++ K+
Sbjct: 268 SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKL 319
Score = 248 (92.4 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFN 153
+FE ++ L+ HP P++LT+ + +I+LWD+ CT F+ H V F+
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRM---CTLIDKFDEHDGPVRGIDFH 60
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
K F S D I++WN FTL H I F + ++++ SDD T+
Sbjct: 61 -KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
+VW+++++TCV +L GH + V FHP ++++AS D T+ +W+ + R +N LS G
Sbjct: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN-LSPG 175
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 346 (126.9 bits), Expect = 3.6e-30, P = 3.6e-30
Identities = 71/204 (34%), Positives = 115/204 (56%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF----TLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPTE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV--YLITGSD 209
+GI +D F T+D V +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 284 (105.0 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 76/292 (26%), Positives = 128/292 (43%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F + V+ +DFH QP ++ + +WNY + ++ +RT F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 105
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
WI+ SDD+ IRV+++ + V H Y+ HPT V++AS D+ +++WD
Sbjct: 106 PWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWD-- 163
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
G + D+ L GT + K L+ H++G+N
Sbjct: 164 --------ISGLRKKNLSPGAVESDVRGITGVDLFGTTD------AVVKHVLEGHDRGVN 209
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITA 249
+ T + ++G+DD VK+W E+K V GH NNV+ FHP +I++
Sbjct: 210 WAAFHPTMPLI--VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSN 267
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
SED +I +W+ + T +R W + N A G D G ++ K+
Sbjct: 268 SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKL 319
Score = 247 (92.0 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFN 153
+FE ++ L+ HP P++LT+ + +I+LWD+ CT F+ H V F+
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRM---CTLIDKFDEHDGPVRGIDFH 60
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
K F S D I++WN FTL H I F + ++++ SDD T+
Sbjct: 61 -KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTI 117
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
+VW+++++TCV +L GH + V FHP ++++AS D T+ +W+ + R +N LS G
Sbjct: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKN-LSPG 175
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 87/299 (29%), Positives = 146/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDS-VQDISFDQTGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK +K+W+ + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
TF GH +V N +D AS S D T+++W + + K L HE + CI +
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 199 S------------DKV------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
S +K +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
P R +++ ++D T+ IW+ R TLS+ V S+ + K S V G + T+ V
Sbjct: 348 PGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV 406
Score = 219 (82.2 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 56/260 (21%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F T + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK +++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC +H + A ++ + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + ++++ +DD T+++WDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHPGGR-FVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKASPYVVTGSVDQTVKVW 407
Score = 213 (80.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 54/183 (29%), Positives = 85/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY + + H D ++ ++ T + +
Sbjct: 109 SPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D T+++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTMKMWEVATGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D L + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 208 (78.3 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 44/163 (26%), Positives = 81/163 (49%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAG-DFERTLKGHTDSVQDISFDQTG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTMKMWEVA 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + ++ + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVAT 265
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 45/153 (29%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I + T K
Sbjct: 106 GHRSPVTRVIFHPV-FSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG-K 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D T+ +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLLA-SCSN 254
Score = 176 (67.0 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 59/218 (27%), Positives = 93/218 (42%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + + S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLA-----VHPTF---------------PFVLTA 119
D+ +RV+ T E HE + ++ HPT PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+P + A D T++IW+ +
Sbjct: 315 SRDKTIKMWDISTGM-CLMTLVGHDNWVRGVLFHPGGRFVVSCAD-DKTLRIWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL AHE + +D+ S Y++TGS D TVKVW+
Sbjct: 373 MKTLSAHEHFVTSLDFHKASP--YVVTGSVDQTVKVWE 408
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 339 (124.4 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 64/169 (37%), Positives = 102/169 (60%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS+RVK + FHP +PW+LASL+SG + +W+Y T + PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y T + H DYIR++ H P++++ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
C GH+HYVM ++F+PK+ + SASLD T+++W++ + K
Sbjct: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALKKK 170
Score = 240 (89.5 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 47/165 (28%), Positives = 89/165 (53%)
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAF-NP 154
+FE + ++ L+ HP P++L + +I+LWD+ F+ H V F N
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMG-TLIDRFDEHEGPVRGVHFHNS 62
Query: 155 KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVK 214
+ L F S D I++WN + FTL H I + + + ++++ SDD T++
Sbjct: 63 QPL--FVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFH--HENPWIVSASDDQTIR 118
Query: 215 VWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+W+++++TC+ +L GH + V FHP+ ++++AS D T+ +W+
Sbjct: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 199 (75.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 50/155 (32%), Positives = 81/155 (52%)
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
+SA DL F+ + D ++ + K+ L+ H++G+N + T + ++G+
Sbjct: 170 KSASPADDLMRFSQMNSD----LFGGVDAIVKYVLEGHDRGVNWASFHPTLPLI--VSGA 223
Query: 209 DDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQ 266
DD VK+W ETK V L GH NNV++V FH + II++ SED +I +W+AT
Sbjct: 224 DDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGI 283
Query: 267 NTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
T +R W + N +A G DNG ++ K+
Sbjct: 284 QTFRREHDRFWILAVHPEINLLAAGHDNGMIVFKL 318
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/156 (25%), Positives = 70/156 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V FHP + V+++ TV +W+ + +KS D +R ++ + + G
Sbjct: 138 VMCASFHPKEDLVVSASLDQTVRVWDIGA-LKKKSASPADDLMRFSQMNSD----LFGGV 192
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE--KNWECT 137
D ++ E H+ + + HPT P +++ +DD+ +KLW K WE
Sbjct: 193 DAIVKYV----------LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE-V 241
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
T GH + V F+ K + S S D +I++W+
Sbjct: 242 DTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWD 276
Score = 119 (46.9 bits), Expect = 0.00086, P = 0.00086
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 9 IEKEFIQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYH-SQTTE-KSVKVTDSPVRTA 65
I K ++ DR V FHPT P +++ V +W + ++ E +++ + V +
Sbjct: 195 IVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSV 254
Query: 66 KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLI 125
F A++ IV S+DK IRV+D ++ F D LAVHP + D+ +I
Sbjct: 255 MFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNGMI 314
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHTGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 224 (83.9 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F T + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWD++ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 219 (82.2 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 55/183 (30%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ T + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 213 (80.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHTG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 185 (70.2 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I + T K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG-K 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 168 (64.2 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDISTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 FKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/100 (30%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+D+
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 187 (70.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 187 (70.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 187 (70.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 46 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 104
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 105 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 163
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 164 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 222
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 223 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 282
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 283 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 341
Score = 222 (83.2 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 85 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 144
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 145 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 204
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 205 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 264
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 265 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 322
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 323 FHKTAPYVVTGSVDQTVKVW 342
Score = 215 (80.7 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 44 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 103
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 104 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 161
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 162 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 219
Query: 240 HPE 242
PE
Sbjct: 220 APE 222
Score = 214 (80.4 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 42 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 99
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 100 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 157
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 158 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 200
Score = 187 (70.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 41 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 98
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 99 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 157
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 158 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 189
Score = 167 (63.8 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 244 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 301
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 302 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 343
Score = 149 (57.5 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 244 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 303
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 304 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 99 LLA-SC-SADMTIKLWDFQGFECI 120
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 187 (70.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 187 (70.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 187 (70.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 187 (70.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 84/299 (28%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 187 (70.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 84/299 (28%), Positives = 144/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VEDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 58/260 (22%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 54/183 (29%), Positives = 85/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D + ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 212 (79.7 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVEDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 187 (70.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 84/289 (29%), Positives = 142/289 (49%)
Query: 20 VKSVDFHPTQPW-VLASLYS-GTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVC 76
+ V FHP W ++AS T+ +W+Y + E+++K TD+ A A + + C
Sbjct: 109 ITRVIFHPL--WTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSC 166
Query: 77 GSDDKFIRVFDYN-TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
SD I+++D+ T +K + HE + S+ PT FVL+AS D IK WD +
Sbjct: 167 SSDLS-IKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGY- 224
Query: 136 CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY 195
C TF GH+ +V + D FASASLD T+ +W+ + +AK L HE + C+++
Sbjct: 225 CVYTFRGHNDWVRMIRIS-NDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEW 283
Query: 196 F-------ITSDKV------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
+T + L +GS D ++K W+ T + L H N V + FHP+
Sbjct: 284 APDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPK 343
Query: 243 LRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+ +I+ ++D T+ +W + R + + V ++ + + S V G
Sbjct: 344 GKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITG 392
Score = 229 (85.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 67/267 (25%), Positives = 125/267 (46%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTE--KSVKVTDSPVRTA 65
Q+E+ +D V + +++ ++ +W++ QT + KS+K + V +
Sbjct: 139 QLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDF-GQTYDCLKSLKGHEHTVSSV 197
Query: 66 KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLI 125
F+ +++ S D I+ +D +T V F H D++R + + +AS D+ +
Sbjct: 198 TFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTV 257
Query: 126 KLW------------DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFA--SASLDGTIQI 171
+W D E EC + + + Y + P+ +T S S D +I+
Sbjct: 258 TVWSFATKSAKLVLRDHEHAVECVE-WAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKA 316
Query: 172 WNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
WN+++ FTL AHE + + F K YLI+ +DD T++VW+ + C++ +E H
Sbjct: 317 WNINTGDVLFTLLAHENWVRGLA-FHPKGK-YLISVADDKTLRVWELSAQRCMKAIEAHE 374
Query: 232 NNVTAVCFHPELRIIITASEDGTILIW 258
+ V+ V FH +IT S D + +W
Sbjct: 375 HFVSTVAFHQTSPFVITGSVDMSCKVW 401
Score = 226 (84.6 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 68/262 (25%), Positives = 117/262 (44%)
Query: 56 KVTDSPVRTAKFVAREHWIVCGS--DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTF 113
K+T + + + W + S +D I+V+DY T + + H D + +A+
Sbjct: 101 KLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAG 160
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
+++ S D IKLWD+ + ++C ++ +GH H V F P + SAS D TI+ W+
Sbjct: 161 KQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTG-DFVLSASRDHTIKQWD 219
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNN 233
+ + +T H + I I++D + S D TV VW + TK+ +L H +
Sbjct: 220 ISTGYCVYTFRGHNDWVRMIR--ISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHA 277
Query: 234 VTAVCFHPEL---------------RIIITASEDGTILIWNATTFRLQNTLSSGLERVWS 278
V V + P+ I+ + S D +I WN T + TL + V
Sbjct: 278 VECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRG 337
Query: 279 IGYK-KGSNQVAFGCDNGTLIV 299
+ + KG ++ D+ TL V
Sbjct: 338 LAFHPKGKYLISVA-DDKTLRV 358
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 44/169 (26%), Positives = 81/169 (47%)
Query: 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP 154
++ H I + HP + + + S+D IK+WD+E + +T +GH+ V A +
Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETG-QLERTLKGHTDAVNDIAIDA 158
Query: 155 KDLNTFASASLDGTIQIWNMDSSAAKF-TLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
S S D +I++W+ + +L HE ++ + + T D ++++ S D T+
Sbjct: 159 AG-KQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGD--FVLSASRDHTI 215
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
K WD T CV GH + V + + + +AS D T+ +W+ T
Sbjct: 216 KQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFAT 264
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 29/98 (29%), Positives = 55/98 (56%)
Query: 36 LYSGT----VCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
L+SG+ + WN ++ ++ ++ VR F + +++ +DDK +RV++ +
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQ 364
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K EAHE ++ ++A H T PFV+T S D K+W+
Sbjct: 365 RCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 83/299 (27%), Positives = 145/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W+Y + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++A+ DK IK+W+ + + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID---- 194
TF GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 195 --YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
Y S+ +L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 348 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 219 (82.2 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 57/260 (21%), Positives = 120/260 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F + + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
+ DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 210 AARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC S+ + A + + S S D TI++W++ +
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + F + K ++++ +DD T++VWDY+ K C++ L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 212 (79.7 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 53/183 (28%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F +V S+D I+V+DY T + + H D ++ ++ + + +
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SA+ D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSAARDKTIKMWEVQTGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 211 (79.3 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 44/163 (26%), Positives = 82/163 (50%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ + D T+K+W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSAARDKTIKMWEVQ 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 184 (69.8 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S K
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHSGK 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++A+ D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQ 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
T T + E V + + +A C N
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254
Score = 167 (63.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 114 PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
PF+L+ S DK IK+WD C T GH ++V F+ + A D T+++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+ TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P++L+ T+ +W+ + ++ D+ VR F + +I+ +DDK +RV+DY
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+K AHE ++ SL H T P+V+T S D+ +K+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 132 (51.5 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
K+ L H + + + +++ S+D T+KVWDYET + L+GHT++V + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 240 HPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
+++ + S D TI +W+ F T+ V S+ + + + T+
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTI 216
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 323 (118.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 62/169 (36%), Positives = 97/169 (57%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHPT+PWVL SL+SG + +W+Y + D PVR F +
Sbjct: 6 KFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFHHDQ 65
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++++ASDD+ +++W+W+
Sbjct: 66 PIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQ 125
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
GH+HYVM + F+P + + ASASLD T+++W++ K
Sbjct: 126 SR-NSIAILTGHNHYVMCAQFHPTE-DLVASASLDQTVRVWDISGLRKK 172
Score = 304 (112.1 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 80/293 (27%), Positives = 133/293 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
++F + V+ + FH QP ++ + +WNY + ++ +RT F +
Sbjct: 47 EKFDEHDGPVRGICFHHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHK 106
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
WI+ SDD+ +R++++ + S+ H Y+ HPT V +AS D+ +++WD
Sbjct: 107 YPWIISASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWD- 165
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
G M P A L G + K L+ H++G+
Sbjct: 166 ---------ISGLRKKQMPGGGAPSRPTGGQQAELFG------QPDAVVKHVLEGHDRGV 210
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIIT 248
N + + T+ L++GSDD VK+W Y ETK + GH NNV++V FHP +I++
Sbjct: 211 NWVAFHHTNP--ILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNADLILS 268
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
SED +I +W+ + ER W + N A G DNG ++ KI
Sbjct: 269 NSEDKSIRVWDMQKRTSLHVFRHENERFWVLAAHPSLNMFAAGHDNGMVVFKI 321
Score = 230 (86.0 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 53/182 (29%), Positives = 92/182 (50%)
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQS 150
M+ + +FE+ ++ ++ HPT P+VLT+ +I+LWD+ + + F+ H V
Sbjct: 1 MSLLIKFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDY-RMCVLLEKFDEHDGPVRGI 59
Query: 151 AFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDD 210
F+ D F S D I++WN FTL H I F ++I+ SDD
Sbjct: 60 CFH-HDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTT--FFHHKYPWIISASDD 116
Query: 211 FTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS 270
TV++W+++++ + IL GH + V FHP ++ +AS D T+ +W+ + R +
Sbjct: 117 QTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLRKKQMPG 176
Query: 271 SG 272
G
Sbjct: 177 GG 178
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 32/121 (26%), Positives = 60/121 (49%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+EK F + V+ + FH QP ++ + +WNY + ++ +RT F
Sbjct: 46 LEK-FDEHDGPVRGICFHHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFH 104
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ WI+ SDD+ +R++++ + S+ H Y+ HPT V +AS D+ +++W
Sbjct: 105 HKYPWIISASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVW 164
Query: 129 D 129
D
Sbjct: 165 D 165
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 83/299 (27%), Positives = 144/299 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
V V FHP ++++ T+ +W++ + E+++K TDS V+ F + S
Sbjct: 111 VTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDS-VQDISFDHTGKLLASCS 169
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + C +
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY-CVK 228
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF-- 196
TF GH +V N +D AS+S D T+++W + + K L HE + CI +
Sbjct: 229 TFTGHREWVRMVRPN-QDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 197 --------ITSDKV--------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
T + +L++GS D T+K+WD C+ L GH N V V H
Sbjct: 288 SAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVH 347
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
P + I++ ++D T+ IW+ R TLS+ V S+ + K + V G + T+ V
Sbjct: 348 PGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 57/260 (21%), Positives = 117/260 (45%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ + F T + + T+ +W++ +++ D V + + IV
Sbjct: 150 TDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-------- 128
S DK I++++ T VK F H +++R + + + ++S+D+ +++W
Sbjct: 210 ASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECK 269
Query: 129 ----DWEKNWECTQTFEGHSHYVMQSAFNPKDLNT------FASASLDGTIQIWNMDSSA 178
+ E EC +H + A + + S S D TI++W++
Sbjct: 270 AELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGM 329
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238
TL H+ + + + Y+++ +DD T+++WDY+ K C + L H + VT++
Sbjct: 330 CLMTLVGHDNWVRGV--LVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLD 387
Query: 239 FHPELRIIITASEDGTILIW 258
FH ++T S D T+ +W
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 55/183 (30%), Positives = 86/183 (46%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
SPV F IV S+D I+V+D+ T + + H D ++ ++ T + +
Sbjct: 109 SPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASC 168
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S D IKLWD++ +EC +T GH H V A P + SAS D TI++W + +
Sbjct: 169 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVATGYC 226
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T H + + + D + + S+D TV+VW TK C L H + V + +
Sbjct: 227 VKTFTGHREWVRMVRP--NQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 240 HPE 242
PE
Sbjct: 285 APE 287
Score = 209 (78.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 45/163 (27%), Positives = 81/163 (49%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + + HP F +++AS+D IK+WD E + +T +GH+ V +F+
Sbjct: 107 HRSPVTRVIFHPVFSVIVSASEDATIKVWDHETG-DFERTLKGHTDSVQDISFDHTG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVA 222
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
T CV+ GH V V + + +I ++S D T+ +W T
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVAT 265
Score = 186 (70.5 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 47/166 (28%), Positives = 82/166 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V + F+P + SAS D TI++W+ ++ + TL H + I + T K
Sbjct: 106 GHRSPVTRVIFHPV-FSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTG-K 163
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 164 L-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
T T + E V + + +A ++ T+ V + + C
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKEC 268
Score = 177 (67.4 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 59/218 (27%), Positives = 93/218 (42%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLA-----VHPTF---------------PFVLTA 119
D+ +RV+ T E HE + ++ HPT PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V +P S + D T++IW+ +
Sbjct: 315 SRDKTIKMWDVSIGM-CLMTLVGHDNWVRGVLVHPGG-KYIVSCADDKTLRIWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 TKTLSAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP +I++ASED TI +W+ T + TL + V I +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 287 QVAFGCDNGTLIVKIGNSSGCDSV 310
+A C + + +K+ + G + +
Sbjct: 164 LLA-SC-SADMTIKLWDFQGFECI 185
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 315 (115.9 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 65/196 (33%), Positives = 109/196 (55%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+K + FHP +PW+L+SL++G + +W T D PVR F ++ V G D
Sbjct: 2 LKRLSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 61
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+ C
Sbjct: 62 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSR-TCVCV 120
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF----TLDAHEKGINCIDY 195
GH+HYVM + F+P + + SASLD T+++W++ K +++ +GI +D
Sbjct: 121 LTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 179
Query: 196 FITSDKV--YLITGSD 209
F T+D V +++ G D
Sbjct: 180 FGTTDAVVKHVLEGHD 195
Score = 280 (103.6 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 75/292 (25%), Positives = 128/292 (43%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F + V+ +DFH QP ++ + +WNY + ++ +RT F
Sbjct: 36 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 95
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
WI+ SDD+ IRV+++ + V H Y+ HP+ V++AS D+ +++WD
Sbjct: 96 PWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD-- 153
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
G + D+ L GT + K L+ H++G+N
Sbjct: 154 --------ISGLRKKNLSPGAVESDVRGITGVDLFGTTD------AVVKHVLEGHDRGVN 199
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDY-ETKTC-VQILEGHTNNVTAVCFHPELRIIITA 249
+ T + ++G+DD VK+W E+K V GH NNV+ FHP +I++
Sbjct: 200 WAAFHPTMPLI--VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSN 257
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
SED +I +W+ + T +R W + N A G D G ++ K+
Sbjct: 258 SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKL 309
Score = 230 (86.0 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 54/171 (31%), Positives = 91/171 (53%)
Query: 104 IRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFNPKDLNTFA 161
++ L+ HP P++L++ + +I+LW W CT F+ H V F+ K F
Sbjct: 2 LKRLSFHPKRPWILSSLHNGVIQLWT--TGW-CTLIDKFDEHDGPVRGIDFH-KQQPLFV 57
Query: 162 SASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK 221
S D I++WN FTL H I F + ++++ SDD T++VW+++++
Sbjct: 58 SGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIRVWNWQSR 115
Query: 222 TCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
TCV +L GH + V FHP ++++AS D T+ +W+ + R +N LS G
Sbjct: 116 TCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN-LSPG 165
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 278 (102.9 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 74/282 (26%), Positives = 135/282 (47%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
SD +++V F P + + T+ +W+ S +++++ S V++ F +
Sbjct: 41 SDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLAS 100
Query: 77 GSDDKFIRVFDYNTMASVKE-FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
GS D I++++ + S+K E H D + S+A P +LW+
Sbjct: 101 GSSDTTIKLWN-SASDSLKHTMEGHSDRVESVAFSPNG------------QLWN-PAIGS 146
Query: 136 CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY 195
T EGHS +V+ AF+P D AS S + TI++W+ + K TL H + +
Sbjct: 147 LKHTIEGHSDWVLSVAFSP-DGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWV--LPL 203
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTI 255
+ D L +GS+D T+K+WD + + LEGH+N + ++ F P +++ + S D TI
Sbjct: 204 VFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATI 263
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
+W+ T ++TL + V S+ + S + G + T+
Sbjct: 264 KLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTI 305
Score = 268 (99.4 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 74/261 (28%), Positives = 131/261 (50%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S V+SV F P + + T+ +WN S + + +++ V + F
Sbjct: 83 SSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN------ 136
Query: 77 GSDDKFIRVFDYNTMASVKE-FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
G ++++ + S+K E H D++ S+A P + + S +K IKLWD
Sbjct: 137 G------QLWN-PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD-SATCG 188
Query: 136 CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY 195
T GHS++V+ F+P D AS S D TI++W+ S + K TL+ H I + +
Sbjct: 189 LKHTLGGHSNWVLPLVFSP-DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAF 247
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTI 255
+ + L +GS D T+K+WD T + L+GH++ V +V F P+ +++ + S D TI
Sbjct: 248 --SPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTI 305
Query: 256 LIWNATTFRLQNTLSS-GLER 275
+W+ T L++++ + G+ R
Sbjct: 306 KLWDPATGILKHSMRTPGIVR 326
Score = 222 (83.2 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 58/204 (28%), Positives = 101/204 (49%)
Query: 94 VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFN 153
++ E H D+I ++ P + + S+D IKLWD + QT EGHS V AF+
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWD-PASGGLKQTLEGHSSSVQSVAFS 92
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
P AS S D TI++WN S + K T++ H SD+V + S +
Sbjct: 93 PNG-QLLASGSSDTTIKLWNSASDSLKHTMEGH------------SDRVESVAFSPNG-- 137
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGL 273
++W+ + +EGH++ V +V F P+ +++ + S + TI +W++ T L++TL
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 274 ERVWSIGYKKGSNQVAFGCDNGTL 297
V + + +A G ++ T+
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATI 221
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 224 VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK 283
+Q LEGH++ + V F P+ R++ + S D TI +W+ + L+ TL V S+ +
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 284 GSNQVAFGCDNGTLIVKIGNSSGCDSV 310
+A G + T +K+ NS+ DS+
Sbjct: 94 NGQLLASGSSDTT--IKLWNSAS-DSL 117
Score = 40 (19.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 286 NQVAFGCDNGTLIVK 300
+ +A GC NG +I +
Sbjct: 396 SSIALGCKNGQIIYR 410
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 305 (112.4 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 75/251 (29%), Positives = 131/251 (52%)
Query: 20 VKSVDF-HPTQPWVLASLYSG-TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG 77
V SV + H ++ +LAS TV IW+ + + + +++ VR+ F + + ++
Sbjct: 299 VLSVSYSHDSR--LLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF-SHDSRLLAS 355
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT 137
+ D ++++D T + E H D++RS+ + +ASDD +K+WD
Sbjct: 356 ASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG-SLQ 414
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
T EGH +V F+ D ASAS D T++IW+ + + + TL+ H + + +
Sbjct: 415 HTLEGHRDWVRSVIFS-HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF-- 471
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
+ D L + SDD TV++WD E + LEGH++ VT+V F + R++ +AS D T+ I
Sbjct: 472 SHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRI 531
Query: 258 WNATTFRLQNT 268
W+ LQ+T
Sbjct: 532 WDIEARSLQHT 542
Score = 282 (104.3 bits), Expect = 5.6e-24, P = 5.6e-24
Identities = 66/204 (32%), Positives = 108/204 (52%)
Query: 94 VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFN 153
++ E HE + S++ + +ASDD+ +K+WD E T EGHS V F+
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETG-SLQHTLEGHSDLVRSVIFS 347
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
D ASAS D T++IW+ + + + TL+ H + + + + D L + SDD TV
Sbjct: 348 -HDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIF--SHDSQLLASASDDSTV 403
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGL 273
K+WD T + LEGH + V +V F + +++ +AS+D T+ IW+ T LQ+TL
Sbjct: 404 KIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHR 463
Query: 274 ERVWSIGYKKGSNQVAFGCDNGTL 297
+ V S+ + S +A D+ T+
Sbjct: 464 DWVRSVIFSHDSRLLASASDDRTV 487
Score = 281 (104.0 bits), Expect = 7.2e-24, P = 7.2e-24
Identities = 66/224 (29%), Positives = 112/224 (50%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ SDD+ ++++D T + E H D +RS+ + +ASD +K+WD
Sbjct: 311 LASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASDST-VKIWDTGTG 369
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
T EGH +V F+ D ASAS D T++IW+ + + + TL+ H + +
Sbjct: 370 -SLQHTLEGHRDWVRSVIFS-HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSV 427
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D L + SDD TVK+WD T + LEGH + V +V F + R++ +AS+D
Sbjct: 428 IF--SHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDR 485
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
T+ IW+ ++TL V S+ + S +A ++ T+
Sbjct: 486 TVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTV 529
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 57/174 (32%), Positives = 92/174 (52%)
Query: 129 DWEKNWE-CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
D +W C Q EGH V+ +++ D ASAS D T++IW+ ++ + + TL+ H
Sbjct: 280 DVANHWSPCLQALEGHEAAVLSVSYS-HDSRLLASASDDRTVKIWDTETGSLQHTLEGHS 338
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+ + I S L+ + D TVK+WD T + LEGH + V +V F + +++
Sbjct: 339 DLVRSV---IFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 395
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
+AS+D T+ IW+ T LQ+TL + V S+ + S +A D+ T VKI
Sbjct: 396 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDST--VKI 447
Score = 203 (76.5 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 53/169 (31%), Positives = 89/169 (52%)
Query: 18 DRVKSVDF-HPTQPWVLASLYS-GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV 75
D V+SV F H +Q +LAS TV IW+ + + + +++ VR+ F +
Sbjct: 380 DWVRSVIFSHDSQ--LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 437
Query: 76 CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
SDD ++++D T + E H D++RS+ + +ASDD+ +++WD EK
Sbjct: 438 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSH 497
Query: 136 CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
T EGHS V +F+ D ASAS D T++IW++++ + + T D
Sbjct: 498 -KHTLEGHSSLVTSVSFS-HDSRLLASASNDQTVRIWDIEARSLQHTFD 544
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 223 CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
C+Q LEGH V +V + + R++ +AS+D T+ IW+ T LQ+TL + V S+ +
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 283 KGSNQVAFGCDNGTLIVKIGNSS 305
S +A D+ I G S
Sbjct: 348 HDSRLLASASDSTVKIWDTGTGS 370
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 81/293 (27%), Positives = 134/293 (45%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+E+ F D + S+DF P+ + + +V +WN Q+ V +F
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFS 69
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
H + S DK +R++ + F AH +RS+ +LTASDD+ IKLW
Sbjct: 70 PSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ + T H+++V + F+P D S S D T+++W D+S+ + E
Sbjct: 130 SVHRQ-KIICTLREHNNWVRCARFSP-DGQLMVSVSDDRTVKLW--DASSRQLIHTFCEP 185
Query: 189 G--INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRII 246
G + +D+ +S + T S D TV+VWD T T +Q + H+ V A+ FHP +
Sbjct: 186 GGYSSYVDFHPSS--TCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHL 243
Query: 247 ITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAF-GCDNGTLI 298
+TAS D T+ I + RL TL + + + +Q A G D ++
Sbjct: 244 LTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMV 296
Score = 220 (82.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 61/254 (24%), Positives = 110/254 (43%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F D V V F P+ + +S TV +W + + VR+ F A
Sbjct: 56 FTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQ 115
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
++ SDD+ I+++ + + H +++R P +++ SDD+ +KLWD
Sbjct: 116 SLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASS 175
Query: 133 NWECTQTF---EGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
+ TF G+S YV F+P A+AS D T+++W++ + H
Sbjct: 176 R-QLIHTFCEPGGYSSYV---DFHPSS-TCIATASSDNTVRVWDIRTHTLLQHYQVHSAA 230
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
+N + + + + +L+T S D T+K+ D + L GH + + V F +A
Sbjct: 231 VNALSFHPSGN--HLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASA 288
Query: 250 SEDGTILIWNATTF 263
D +++W T F
Sbjct: 289 GSDQQVMVWR-TNF 301
Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 59/248 (23%), Positives = 104/248 (41%)
Query: 50 TTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAV 109
T E++ K + + F I GS D + V++ + F H+D + +
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQF 68
Query: 110 HPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169
P+ + ++S DK ++LW E F H+ V F+ D + +AS D +I
Sbjct: 69 SPSAHLLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVRSVCFSA-DGQSLLTASDDQSI 126
Query: 170 QIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG 229
++W++ TL H + C + + D +++ SDD TVK+WD ++ +
Sbjct: 127 KLWSVHRQKIICTLREHNNWVRCARF--SPDGQLMVSVSDDRTVKLWDASSRQLIHTFCE 184
Query: 230 HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVA 289
+ V FHP I TAS D T+ +W+ T L V ++ + N +
Sbjct: 185 PGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLL 244
Query: 290 FGCDNGTL 297
+ TL
Sbjct: 245 TASSDSTL 252
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
I S D +RV+D T ++ ++ H + +L+ HP+ +LTAS D +K+ D +
Sbjct: 201 IATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEG 260
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW--NMDS 176
T GH +F+ + + FASA D + +W N DS
Sbjct: 261 -RLLYTLHGHQGSASCVSFS-RSGDQFASAGSDQQVMVWRTNFDS 303
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 294 (108.6 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 69/227 (30%), Positives = 117/227 (51%)
Query: 36 LYSGT----VCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
L+SG+ + +W+ +++ D PV T + + ++ GS DK I+V+D T+
Sbjct: 515 LFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTV--LLNDKYLFSGSSDKTIKVWDLKTL 572
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
E+H +++L + + F + S+DK IK+WD K + C T +GH+ +V
Sbjct: 573 ECKYTLESHARAVKTLCISGQYLF--SGSNDKTIKVWDL-KTFRCNYTLKGHTKWVTTIC 629
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
+L S S D TI++WN+ S TL H++ + ++ + DK+ L T SDD
Sbjct: 630 ILGTNLY---SGSYDKTIRVWNLKSLECSATLRGHDRWV---EHMVICDKL-LFTASDDN 682
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
T+K+WD ET C LEGH V + + + +I+ S D +I +W
Sbjct: 683 TIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 266 (98.7 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 77/269 (28%), Positives = 133/269 (49%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLAS--LYSG----TVCIWNYHSQTTE--KSVKVTDS 60
I E I+ + +K +H T + L++G ++ +++Y SQ E +++K +
Sbjct: 446 INLETIKLIETIKG--YHVTSHLCICDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEG 503
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV + + + ++ GS D I+V+D + + E H+ + ++ ++ + F + S
Sbjct: 504 PVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLF--SGS 559
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
DK IK+WD K EC T E H+ V + + L F S S D TI++W++ +
Sbjct: 560 SDKTIKVWDL-KTLECKYTLESHARAVKTLCISGQYL--F-SGSNDKTIKVWDLKTFRCN 615
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
+TL H K + I T+ L +GS D T++VW+ ++ C L GH V +
Sbjct: 616 YTLKGHTKWVTTICILGTN----LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVIC 671
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTL 269
+L + TAS+D TI IW+ T R TL
Sbjct: 672 DKL--LFTASDDNTIKIWDLETLRCNTTL 698
Score = 243 (90.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 55/165 (33%), Positives = 90/165 (54%)
Query: 116 VLTASDDKLIKLWDWE-KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
+ T D I+++D++ +N EC QT +GH V +N + L F+ +S D +I++W++
Sbjct: 473 LFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYL--FSGSS-DHSIKVWDL 529
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNV 234
FTL+ H+K ++ + + +DK YL +GS D T+KVWD +T C LE H V
Sbjct: 530 KKLRCIFTLEGHDKPVHTV---LLNDK-YLFSGSSDKTIKVWDLKTLECKYTLESHARAV 585
Query: 235 TAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
+C + + + S D TI +W+ TFR TL + V +I
Sbjct: 586 KTLCISGQY--LFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTI 628
Score = 189 (71.6 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 55/189 (29%), Positives = 96/189 (50%)
Query: 36 LYSG----TVCIWNYHSQTTEKSVKVT-DSPVRTAKFVARE-HWIVCGSDDKFIRVFDYN 89
L+SG T+ +W+ +T E K T +S R K + ++ GS+DK I+V+D
Sbjct: 555 LFSGSSDKTIKVWDL--KTLE--CKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLK 610
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQ 149
T + H ++ ++ + T + + S DK I++W+ K+ EC+ T GH +V
Sbjct: 611 TFRCNYTLKGHTKWVTTICILGTNLY--SGSYDKTIRVWNL-KSLECSATLRGHDRWVEH 667
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
K L T AS D TI+IW++++ TL+ H + C+ + DK +I+ S
Sbjct: 668 MVICDKLLFT---ASDDNTIKIWDLETLRCNTTLEGHNATVQCLA--VWEDKKCVISCSH 722
Query: 210 DFTVKVWDY 218
D +++VW +
Sbjct: 723 DQSIRVWGW 731
Score = 143 (55.4 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 43/141 (30%), Positives = 66/141 (46%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF--TLDAHEKGI 190
N E + E Y + S D F S D +I++++ S + TL HE +
Sbjct: 447 NLETIKLIETIKGYHVTSHLCICDNLLFTGCS-DNSIRVYDYKSQNMECVQTLKGHEGPV 505
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS 250
I Y +D+ YL +GS D ++KVWD + C+ LEGH V V + + + + S
Sbjct: 506 ESICY---NDQ-YLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLND--KYLFSGS 559
Query: 251 EDGTILIWNATTFRLQNTLSS 271
D TI +W+ T + TL S
Sbjct: 560 SDKTIKVWDLKTLECKYTLES 580
Score = 44 (20.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPT----FPFVLTA---SDDKLIKLWDW 130
+D KF + NT+A ++ Y+R PT P + A ++ IK W++
Sbjct: 65 ADSKFEKFKARNTLADIQYKVGDTLYVRVKKSKPTNDSLLPTLNIAFLDGSERAIK-WEY 123
Query: 131 EK-----NWECTQT 139
+ W CT T
Sbjct: 124 DPYTTTAQWTCTAT 137
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 79/267 (29%), Positives = 122/267 (45%)
Query: 47 HSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMAS-----VKEFEAHE 101
HSQT + S KF + + S DK IR + NT+ V+EF HE
Sbjct: 16 HSQTLTSHNRAVSS----VKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHE 71
Query: 102 DYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFA 161
+ I +A F+++ASDDK +KLWD E +T GH++Y FNP+ N
Sbjct: 72 NGISDVAFSSDARFIVSASDDKTLKLWDVETG-SLIKTLIGHTNYAFCVNFNPQS-NMIV 129
Query: 162 SASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK 221
S S D T++IW++ + L AH + +D+ D +++ S D ++WD T
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDF--NRDGSLIVSSSYDGLCRIWDSGTG 187
Query: 222 TCVQILEGHTNN-VTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIG 280
CV+ L N V+ V F P + I+ + D T+ +WN ++ + T + + + I
Sbjct: 188 HCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCIS 247
Query: 281 YKKGSNQVAFGCDNGTLIVKIGNSSGC 307
AF NG IV G+ C
Sbjct: 248 S-------AFSVTNGKRIVS-GSEDNC 266
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 67/253 (26%), Positives = 124/253 (49%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
+EF + + V F +++++ T+ +W+ + + K++ + F +
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ 124
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
+ IV GS D+ +R++D T +K AH D + ++ + ++++S D L ++WD
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD- 183
Query: 131 EKNWECTQTF-EGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF--TLDAHE 187
C +T + + V F+P +LD T+++WN+ S+AKF T H
Sbjct: 184 SGTGHCVKTLIDDENPPVSFVRFSPNG-KFILVGTLDNTLRLWNI--SSAKFLKTYTGHV 240
Query: 188 KGINCID--YFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
CI + +T+ K +++GS+D V +W+ +K +Q LEGHT V V HP +
Sbjct: 241 NAQYCISSAFSVTNGK-RIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENL 299
Query: 246 IITASEDGTILIW 258
I + S D T+ IW
Sbjct: 300 IASGSLDKTVRIW 312
Score = 206 (77.6 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 54/239 (22%), Positives = 109/239 (45%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
++ + F + +IV SDDK ++++D T + +K H +Y + +P +++
Sbjct: 71 ENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVS 130
Query: 119 ASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS- 177
S D+ +++WD +C + HS V FN +D + S+S DG +IW+ +
Sbjct: 131 GSFDETVRIWDVTTG-KCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIWDSGTGH 188
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
K +D ++ + F + K +++ G+ D T+++W+ + ++ GH N
Sbjct: 189 CVKTLIDDENPPVSFVR-FSPNGK-FILVGTLDNTLRLWNISSAKFLKTYTGHVN--AQY 244
Query: 238 CFHPELRI-----IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
C + I++ SED + +W + +L L E V ++ N +A G
Sbjct: 245 CISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASG 303
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/116 (25%), Positives = 56/116 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVK--VTDSPVRTAKF-VAREHWIVC 76
V V F P ++L T+ +WN S K+ V ++ F V IV
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
GS+D + +++ N+ +++ E H + + ++A HPT + + S DK +++W +K
Sbjct: 261 GSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 291 (107.5 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 80/280 (28%), Positives = 138/280 (49%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ V + P ++ SG +WN + E ++ DS VR+ + E W+V G D
Sbjct: 128 INCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDD 187
Query: 80 DKFIRVFDYNTMASVKEFEAHEDY-IRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
I+ + N M +VK F+AHE IR L+ PT + + +DDK+IK+WD+ + E Q
Sbjct: 188 SGNIKYWQPN-MNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQ 246
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
GH V +++P+ + S D I+IW+ SS TL H+ ++ +++
Sbjct: 247 LV-GHGWDVKCVSWHPQK-SLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEW--N 302
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR-IIITASEDGTILI 257
+ ++++ S D +KV+D T +Q +GH VTA+ HP + ++ +DG IL
Sbjct: 303 QNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILY 362
Query: 258 WNATTFRLQNTLSSGLER-VWSIGYKKGSNQVAFGCDNGT 296
W Q + S + VWS+ + + +A G ++ T
Sbjct: 363 WIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHT 402
Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 51/248 (20%), Positives = 107/248 (43%)
Query: 14 IQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
+Q D V+S+ + + W+++ SG + W + + S +R F +
Sbjct: 163 LQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDL 222
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+ +DDK I+++D+ + H ++ ++ HP +++ D IK+WD +
Sbjct: 223 KLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKS 282
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ T T GH V + +N N SAS D ++++++ + T H K +
Sbjct: 283 SQNIT-TLHGHKSTVSKVEWNQNG-NWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTA 340
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDY-ETKTCVQILEGHTNNVTAVCFHPELRIIITASE 251
+ + ++ ++G D + W + +I H +V ++ +HP I+ + S
Sbjct: 341 LALHPYHEDLF-VSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSN 399
Query: 252 DGTILIWN 259
D T W+
Sbjct: 400 DHTTKFWS 407
Score = 175 (66.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 55/240 (22%), Positives = 103/240 (42%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P L S +VC H T+ VK P+ + +V GS +++
Sbjct: 101 PIALESNPITSVCSRFIH--TSSNKVKY---PINCVSWTPEGRRLVTGSSSGEFTLWNGL 155
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQ 149
T +AH+ +RS+ ++++ D IK W + N + F+ H ++
Sbjct: 156 TFNFETILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYW--QPNMNNVKIFKAHEQSKIR 213
Query: 150 S-AFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
+F+P DL AS + D I+IW+ L H + C+ + K +++G
Sbjct: 214 GLSFSPTDLK-LASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWH--PQKSLIVSGG 270
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268
D +K+WD ++ + L GH + V+ V ++ I++AS D + +++ T + T
Sbjct: 271 KDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQT 330
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
VK V +HP + +++ + IW+ S ++ S V ++ +WIV S
Sbjct: 254 VKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASS 313
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD-DKLIKLWDWEKNWECTQ 138
D+ ++VFD TM ++ F+ H + +LA+HP + + D D I W +
Sbjct: 314 DQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVGNPEPQAE 373
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
H V +++P + AS S D T + W+ + A
Sbjct: 374 IHSAHDADVWSLSWHPIG-HILASGSNDHTTKFWSRNRPA 412
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 70/236 (29%), Positives = 115/236 (48%)
Query: 23 VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKF 82
+ F+P V T +W+ + +++ + + + F I+ GS D
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHT 242
Query: 83 IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEG 142
+ V+D +T V H I S + + +LT S DK KLWD N +C T G
Sbjct: 243 VVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWD-ATNGKCVATLTG 301
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
H ++ S F+ A+AS DGT +I++ + L+ HE I+ I + +
Sbjct: 302 HDDEILDSCFDYTG-KLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGN-- 358
Query: 203 YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
+L+TGS D T ++WD +T C+Q+LEGHT+ + + F+ + I+IT S+D T IW
Sbjct: 359 HLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 269 (99.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 64/223 (28%), Positives = 113/223 (50%)
Query: 75 VCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVH-PTFPFVLTASDDKLIKLWDWEKN 133
+ GS D+ +++D + + E H + + ++A + P + T S DK KLW E
Sbjct: 108 ITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+C TF GH+ ++ +FNP+ A+ S+D T ++W++ + +TL H I +
Sbjct: 168 -KCYHTFRGHTAEIVCLSFNPQS-TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISL 225
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D++ ITGS D TV VWD +T V IL GH +++ F+ + +I+T S D
Sbjct: 226 SFNTSGDRI--ITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDK 283
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGT 296
T +W+AT + TL+ + + + +A +GT
Sbjct: 284 TCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 67/234 (28%), Positives = 100/234 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
I GS DK +++ T F H I L+ +P V T S D KLWD + N
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ-N 208
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
E T GHS ++ +FN + + S D T+ +W+ D+ L H I+
Sbjct: 209 GEEVYTLRGHSAEIISLSFNTSG-DRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSA 267
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ D ++TGS D T K+WD CV L GH + + CF ++I TAS DG
Sbjct: 268 SF--NWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
T I++A T + L + I + N + G + T + + C
Sbjct: 326 TARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQC 379
Score = 230 (86.0 bits), Expect = 9.7e-19, P = 9.7e-19
Identities = 63/280 (22%), Positives = 123/280 (43%)
Query: 20 VKSVDFH-PTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS 78
V ++ F+ P + + T +W+ + + + + + F + + GS
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGS 196
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D +++D V H I SL+ + + ++T S D + +WD + +
Sbjct: 197 MDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRK-VN 255
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI--NCIDYF 196
GH + ++FN D + + S+D T ++W+ + TL H+ I +C DY
Sbjct: 256 ILIGHCAEISSASFN-WDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDY- 313
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+ K+ + T S D T +++ T+ C+ LEGH ++ + F+P+ ++T S D T
Sbjct: 314 --TGKL-IATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTAR 370
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGT 296
IW+A T + L + ++S + N V G + T
Sbjct: 371 IWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNT 410
Score = 222 (83.2 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 55/181 (30%), Positives = 88/181 (48%)
Query: 89 NTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
+T K +AH + ++A++ + +T S D+ KLWD E T EGH + V
Sbjct: 80 HTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELN-TLEGHRNVVY 138
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
AFN + A+ S D T ++W++++ T H I C+ + + TGS
Sbjct: 139 AIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF--NPQSTLVATGS 196
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268
D T K+WD + V L GH+ + ++ F+ IIT S D T+++W+A T R N
Sbjct: 197 MDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNI 256
Query: 269 L 269
L
Sbjct: 257 L 257
Score = 164 (62.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 41/150 (27%), Positives = 68/150 (45%)
Query: 151 AFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT-SDKVYLITGSD 209
A N K + F + S D T ++W+ S TL+ H + I + DK+ TGS
Sbjct: 99 ALN-KSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI--ATGSF 155
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
D T K+W ET C GHT + + F+P+ ++ T S D T +W+ TL
Sbjct: 156 DKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTL 215
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ S+ + +++ G + T++V
Sbjct: 216 RGHSAEIISLSFNTSGDRIITGSFDHTVVV 245
Score = 152 (58.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 50/203 (24%), Positives = 90/203 (44%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEK-SVKVTD-SPVRTAKFVAREHWI 74
S + S+ F+ + ++ + TV +W+ + T K ++ + + + +A F I
Sbjct: 219 SAEIISLSFNTSGDRIITGSFDHTVVVWD--ADTGRKVNILIGHCAEISSASFNWDCSLI 276
Query: 75 VCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW 134
+ GS DK +++D V H+D I T + TAS D +++
Sbjct: 277 LTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR- 335
Query: 135 ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI-NCI 193
+C EGH + + +FNP+ N + S D T +IW+ + L+ H I +C
Sbjct: 336 KCIAKLEGHEGEISKISFNPQG-NHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCA 394
Query: 194 DYFITSDKVYLITGSDDFTVKVW 216
F + +ITGS D T ++W
Sbjct: 395 --FNYKGNI-VITGSKDNTCRIW 414
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 74/288 (25%), Positives = 140/288 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG-S 78
+ SV F P W+ ++ T+ IW + E++++ + + +++ ++C S
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAW-SQDSKLICSAS 107
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
DDK I+++D + VK + H++Y+ ++ +P +++ S D+ +++WD ECT+
Sbjct: 108 DDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTG-ECTK 166
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE-KGINCIDYFI 197
HS V FN +D S S DGT++IW+ + T+ + K ++ + F
Sbjct: 167 MISAHSDPVTGVHFN-RDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVK-FS 224
Query: 198 TSDKVYLITGSDDFTVKVWDYET-KTCVQILEGHTNNVTAV--CFHPEL-RIIITASEDG 253
+ K +++ G+ D T+++W Y K C++ GH N + F + I+T SED
Sbjct: 225 PNGK-FVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDN 283
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
I I+N T + TL+ + V ++ N +A G VKI
Sbjct: 284 LIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKI 331
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 65/214 (30%), Positives = 114/214 (53%)
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKD 156
+ H I S+ P ++ +AS DK IK+W ++ +E +T EGH + A++ +D
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFE--RTLEGHKEGISDIAWS-QD 99
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
SAS D TI+IW+++S TL H++ + + + S+ + ++GS D V++W
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI--VSGSFDENVRIW 157
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS--GLE 274
D T C +++ H++ VT V F+ + ++++ S DGT+ IW+ TT +L NT+S+ G E
Sbjct: 158 DVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKE 217
Query: 275 RVWSIGYKKGSNQVAFGC-DNGTLIVKIGNSSGC 307
V + + V G DN + N+ C
Sbjct: 218 -VSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKC 250
Score = 170 (64.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 47/202 (23%), Positives = 85/202 (42%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V F+P +++ + V IW+ ++ K + PV F +V GS
Sbjct: 133 VFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSY 192
Query: 80 DKFIRVFDYNTMASVKEFEAHEDY-IRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D +R++D T + + + + P FVL + D ++LW + N +C +
Sbjct: 193 DGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLK 252
Query: 139 TFEGHSH--YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
T+ GH + Y + S F+ + S D I I+N+ + TL HE + +
Sbjct: 253 TYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACH 312
Query: 197 ITSDKVYLITGSDDFTVKVWDY 218
T + + D +VK+W +
Sbjct: 313 PTENIIASGALEKDRSVKIWKH 334
Score = 156 (60.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 38/130 (29%), Positives = 68/130 (52%)
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD-YETKTCVQILEGHTNNVTAVC 238
K+TL H K I+ + + + D +L + S D T+K+W Y+ K + LEGH ++ +
Sbjct: 39 KYTLKGHLKSISSVKF--SPDGKWLASASADKTIKIWGAYDGKF-ERTLEGHKEGISDIA 95
Query: 239 FHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC-DNGTL 297
+ + ++I +AS+D TI IW+ + ++ TL E V+ + + SN + G D
Sbjct: 96 WSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVR 155
Query: 298 IVKIGNSSGC 307
I + N+ C
Sbjct: 156 IWDV-NTGEC 164
Score = 152 (58.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 45/165 (27%), Positives = 79/165 (47%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP-VRTAKFVAREHWIV 75
SD V V F+ V++ Y GTV IW+ + ++ D V KF +++
Sbjct: 172 SDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVL 231
Query: 76 CGSDDKFIRVFDYNTMAS-VKEFEAHEDYIRSLAVHPTFP-----FVLTASDDKLIKLWD 129
G+ D +R++ YN +K + H++ + TF +++T S+D LI +++
Sbjct: 232 AGTLDNTLRLWSYNNNKKCLKTYTGHKN--EKYCIFSTFSVTCGKWIVTGSEDNLIYIYN 289
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASL--DGTIQIW 172
+ E QT GH V+ A +P + N AS +L D +++IW
Sbjct: 290 LQTR-EIVQTLAGHEDVVLTVACHPTE-NIIASGALEKDRSVKIW 332
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 279 (103.3 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 71/236 (30%), Positives = 114/236 (48%)
Query: 23 VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKF 82
+ F+P V T +W+ S ++ + + + F + I+ GS D
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHT 242
Query: 83 IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEG 142
+ V++ +T V H I S + +LT S DK KLWD N +C T G
Sbjct: 243 VTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWD-AVNGKCVATLTG 301
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
H ++ S F+ A+AS DGT +I++ + L+ HE I+ I + ++
Sbjct: 302 HDDEILDSCFDYTG-KLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNR- 359
Query: 203 YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
L+TGS D T ++WD +T C+Q+LEGHT+ + + F+ + IIIT S+D T IW
Sbjct: 360 -LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 256 (95.2 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 62/223 (27%), Positives = 111/223 (49%)
Query: 75 VCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVH-PTFPFVLTASDDKLIKLWDWEKN 133
+ GS D+ +++D + + E H + + ++A + P + T S DK KLW E
Sbjct: 108 ITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+C TF GH+ ++ +FNP+ A+ S+D T ++W++ S FTL H I +
Sbjct: 168 -KCYHTFRGHTAEIVCLSFNPQS-TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISL 225
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + +++ ITGS D TV VW+ +T V L GH +++ F+ + +I+T S D
Sbjct: 226 SFNTSGNRI--ITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDK 283
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGT 296
T +W+A + TL+ + + + +A +GT
Sbjct: 284 TCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Score = 247 (92.0 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 68/234 (29%), Positives = 100/234 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
I GS DK +++ T F H I L+ +P V T S D KLWD +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG 209
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
E T GHS ++ +FN N + S D T+ +W D+ +TL H I+
Sbjct: 210 EEVF-TLTGHSAEIISLSFNTSG-NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSA 267
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ D ++TGS D T K+WD CV L GH + + CF ++I TAS DG
Sbjct: 268 VF--NWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
T I++A T L + I + N++ G + T + + C
Sbjct: 326 TARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQC 379
Score = 223 (83.6 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 64/279 (22%), Positives = 124/279 (44%)
Query: 20 VKSVDFH-PTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS 78
V ++ F+ P + + T +W+ + + + + + F + + GS
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGS 196
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D +++D + V H I SL+ + + ++T S D + +W+ + +
Sbjct: 197 MDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRK-VY 255
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI--NCIDYF 196
T GH + + FN D + + S+D T ++W+ + TL H+ I +C DY
Sbjct: 256 TLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDY- 313
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+ K+ + T S D T +++ T+ CV LEGH ++ + F+P+ ++T S D T
Sbjct: 314 --TGKL-IATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTAR 370
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYK-KGSNQVAFGCDN 294
IW+A T + L + ++S + KG + DN
Sbjct: 371 IWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDN 409
Score = 215 (80.7 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 54/175 (30%), Positives = 84/175 (48%)
Query: 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP 154
K AH + ++A++ + +T S D+ KLWD E T EGH + V AFN
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEEL-HTLEGHRNVVYAIAFNN 144
Query: 155 KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVK 214
+ A+ S D T ++W++++ T H I C+ + + TGS D T K
Sbjct: 145 PYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF--NPQSTLVATGSMDTTAK 202
Query: 215 VWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
+WD ++ V L GH+ + ++ F+ IIT S D T+ +W A T R TL
Sbjct: 203 LWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTL 257
Score = 169 (64.5 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 42/150 (28%), Positives = 69/150 (46%)
Query: 151 AFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT-SDKVYLITGSD 209
A N K + F + S D T ++W+ S TL+ H + I + DK+ TGS
Sbjct: 99 ALN-KSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI--ATGSF 155
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
D T K+W ET C GHT + + F+P+ ++ T S D T +W+ + TL
Sbjct: 156 DKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTL 215
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ + S+ + N++ G + T+ V
Sbjct: 216 TGHSAEIISLSFNTSGNRIITGSFDHTVTV 245
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 172 (65.6 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 39/134 (29%), Positives = 68/134 (50%)
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT 137
S D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CV 59
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
+TF GH +V N +D AS S D T+++W + + K L HE + CI +
Sbjct: 60 KTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 118
Query: 198 TSD--KVYLITGSD 209
S + TGS+
Sbjct: 119 ESSYSSISEATGSE 132
Score = 137 (53.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
D+ VR F + +I+ +DDK +RV+DY +K AHE ++ SL H T P+V+T
Sbjct: 136 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 195
Query: 119 ASDDKLIKLWD 129
S D+ +K+W+
Sbjct: 196 GSVDQTVKVWE 206
Score = 128 (50.1 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 20/56 (35%), Positives = 37/56 (66%)
Query: 203 YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
++++ +DD T++VWDY+ K C++ L H + VT++ FH ++T S D T+ +W
Sbjct: 150 FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 126 (49.4 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W T
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDN 294
T + E V + + +A C N
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIA-SCSN 86
Score = 126 (49.4 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 164 SLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC 223
S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W+ +T C
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYC 58
Query: 224 VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
V+ GH V V + + +I + S D T+ +W T
Sbjct: 59 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 97
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 135 ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID 194
E T + GH ++V F+ + A D T+++W+ + TL+AHE + +D
Sbjct: 127 EATGSEVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTLNAHEHFVTSLD 185
Query: 195 YFITSDKVYLITGSDDFTVKVWD 217
+ T+ Y++TGS D TVKVW+
Sbjct: 186 FHKTAP--YVVTGSVDQTVKVWE 206
Score = 113 (44.8 bits), Expect = 0.00020, P = 0.00020
Identities = 41/204 (20%), Positives = 83/204 (40%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ +W++ +++ D V + + IV S DK I++++ T VK F
Sbjct: 5 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 64
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +++R + + + + S+D+ +++W EC H H V ++ P+ +
Sbjct: 65 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-ECKAELREHEHVVECISWAPESSYS 123
Query: 160 FASASLDGTI--QIWN---MDSSAAKFTLD-AHEKGINCIDYFITSDKVYLITGSDDFTV 213
S + + W + S KF L A +K + DY + + + + V
Sbjct: 124 SISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY--KNKRCMKTLNAHEHFV 181
Query: 214 KVWDYETKTCVQILEGHTNNVTAV 237
D+ KT ++ G + V
Sbjct: 182 TSLDFH-KTAPYVVTGSVDQTVKV 204
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 281 (104.0 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 80/305 (26%), Positives = 134/305 (43%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+E+ F + SVDF P+ + + + + +WN Q V + +F
Sbjct: 10 LERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ + S D+ +R++ + EF+AH +RS+ F+ TAS+DK IK+W
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ + + H+H+V + F+P D S S D TI+IW+ +
Sbjct: 130 NMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
N +D+ + + + D TVK+WD +Q + H+ V V FHP IIT
Sbjct: 188 FANFVDF--NPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIIT 245
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG-CDNGTLIVKIGNSSGC 307
AS DGT+ I + RL TL V+++ + KG + G D L+ + +
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWR----TNF 301
Query: 308 DSVNC 312
D +NC
Sbjct: 302 DYLNC 306
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 72/289 (24%), Positives = 131/289 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P W+ +S + IW + EK++ + + + + +V SD
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 81
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++++D ++ +K + H +Y+ +P +++ S D+ +++WD K +C +T
Sbjct: 82 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCLKT 140
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKGINCIDYFIT 198
HS V FN +D + S+S DG +IW+ S TL D ++ + F
Sbjct: 141 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSP 198
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTI 255
+ K Y++ + D T+K+WDY C++ GH N + + + + I++ SED +
Sbjct: 199 NGK-YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 257
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
IWN T + L + V S N +A +K+ S
Sbjct: 258 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 306
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 52/171 (30%), Positives = 95/171 (55%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H + S+ P ++ ++S DKLIK+W ++ +E +T GH + A++ D N
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWS-SDSN 74
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
SAS D T++IW++ S TL H + C ++ S+ + ++GS D +V++WD
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI--VSGSFDESVRIWDV 132
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
+T C++ L H++ V+AV F+ + +I+++S DG IW+ + + TL
Sbjct: 133 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 183
Score = 210 (79.0 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 49/162 (30%), Positives = 86/162 (53%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N+ T GH+ V F+P AS+S D I+IW + T+ H+ GI+
Sbjct: 8 NYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 66
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +SD L++ SDD T+K+WD + C++ L+GH+N V F+P+ +I++ S D
Sbjct: 67 VAW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 124
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCD 293
++ IW+ T + TL + + V ++ + + GS V+ D
Sbjct: 125 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 166
Score = 158 (60.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 46/203 (22%), Positives = 86/203 (42%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S+ V +F+P +++ + +V IW+ + K++ PV F IV
Sbjct: 103 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 162
Query: 77 GSDDKFIRVFDYNTMASVKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
S D R++D + +K + + + P ++L A+ D +KLWD+ K +
Sbjct: 163 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-K 221
Query: 136 CTQTFEGHSH--YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
C +T+ GH + Y + + F+ S S D + IWN+ + L H +
Sbjct: 222 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 281
Query: 194 DYFITSDKVYLITGSDDFTVKVW 216
T + + +D T+K+W
Sbjct: 282 ACHPTENIIASAALENDKTIKLW 304
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 72/289 (24%), Positives = 131/289 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P W+ +S + IW + EK++ + + + + +V SD
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++++D ++ +K + H +Y+ +P +++ S D+ +++WD K +C +T
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCLKT 166
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKGINCIDYFIT 198
HS V FN +D + S+S DG +IW+ S TL D ++ + F
Sbjct: 167 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSP 224
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTI 255
+ K Y++ + D T+K+WDY C++ GH N + + + + I++ SED +
Sbjct: 225 NGK-YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
IWN T + L + V S N +A +K+ S
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 226 (84.6 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 52/171 (30%), Positives = 95/171 (55%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H + S+ P ++ ++S DKLIK+W ++ +E +T GH + A++ D N
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWS-SDSN 100
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
SAS D T++IW++ S TL H + C ++ S+ + ++GS D +V++WD
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI--VSGSFDESVRIWDV 158
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
+T C++ L H++ V+AV F+ + +I+++S DG IW+ + + TL
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 49/162 (30%), Positives = 86/162 (53%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N+ T GH+ V F+P AS+S D I+IW + T+ H+ GI+
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +SD L++ SDD T+K+WD + C++ L+GH+N V F+P+ +I++ S D
Sbjct: 93 VAW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCD 293
++ IW+ T + TL + + V ++ + + GS V+ D
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 158 (60.7 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 46/203 (22%), Positives = 86/203 (42%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S+ V +F+P +++ + +V IW+ + K++ PV F IV
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 77 GSDDKFIRVFDYNTMASVKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
S D R++D + +K + + + P ++L A+ D +KLWD+ K +
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-K 247
Query: 136 CTQTFEGHSH--YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
C +T+ GH + Y + + F+ S S D + IWN+ + L H +
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 194 DYFITSDKVYLITGSDDFTVKVW 216
T + + +D T+K+W
Sbjct: 308 ACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 72/289 (24%), Positives = 131/289 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P W+ +S + IW + EK++ + + + + +V SD
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++++D ++ +K + H +Y+ +P +++ S D+ +++WD K +C +T
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCLKT 166
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKGINCIDYFIT 198
HS V FN +D + S+S DG +IW+ S TL D ++ + F
Sbjct: 167 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSP 224
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTI 255
+ K Y++ + D T+K+WDY C++ GH N + + + + I++ SED +
Sbjct: 225 NGK-YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
IWN T + L + V S N +A +K+ S
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 226 (84.6 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 52/171 (30%), Positives = 95/171 (55%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H + S+ P ++ ++S DKLIK+W ++ +E +T GH + A++ D N
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWS-SDSN 100
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
SAS D T++IW++ S TL H + C ++ S+ + ++GS D +V++WD
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI--VSGSFDESVRIWDV 158
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
+T C++ L H++ V+AV F+ + +I+++S DG IW+ + + TL
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 49/162 (30%), Positives = 86/162 (53%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N+ T GH+ V F+P AS+S D I+IW + T+ H+ GI+
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +SD L++ SDD T+K+WD + C++ L+GH+N V F+P+ +I++ S D
Sbjct: 93 VAW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCD 293
++ IW+ T + TL + + V ++ + + GS V+ D
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 158 (60.7 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 46/203 (22%), Positives = 86/203 (42%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S+ V +F+P +++ + +V IW+ + K++ PV F IV
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 77 GSDDKFIRVFDYNTMASVKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
S D R++D + +K + + + P ++L A+ D +KLWD+ K +
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-K 247
Query: 136 CTQTFEGHSH--YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
C +T+ GH + Y + + F+ S S D + IWN+ + L H +
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 194 DYFITSDKVYLITGSDDFTVKVW 216
T + + +D T+K+W
Sbjct: 308 ACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 72/289 (24%), Positives = 131/289 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P W+ +S + IW + EK++ + + + + +V SD
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++++D ++ +K + H +Y+ +P +++ S D+ +++WD K +C +T
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCLKT 166
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKGINCIDYFIT 198
HS V FN +D + S+S DG +IW+ S TL D ++ + F
Sbjct: 167 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSP 224
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTI 255
+ K Y++ + D T+K+WDY C++ GH N + + + + I++ SED +
Sbjct: 225 NGK-YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
IWN T + L + V S N +A +K+ S
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 226 (84.6 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 52/171 (30%), Positives = 95/171 (55%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H + S+ P ++ ++S DKLIK+W ++ +E +T GH + A++ D N
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWS-SDSN 100
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
SAS D T++IW++ S TL H + C ++ S+ + ++GS D +V++WD
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI--VSGSFDESVRIWDV 158
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
+T C++ L H++ V+AV F+ + +I+++S DG IW+ + + TL
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 49/162 (30%), Positives = 86/162 (53%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N+ T GH+ V F+P AS+S D I+IW + T+ H+ GI+
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +SD L++ SDD T+K+WD + C++ L+GH+N V F+P+ +I++ S D
Sbjct: 93 VAW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCD 293
++ IW+ T + TL + + V ++ + + GS V+ D
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 158 (60.7 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 46/203 (22%), Positives = 86/203 (42%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S+ V +F+P +++ + +V IW+ + K++ PV F IV
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 77 GSDDKFIRVFDYNTMASVKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
S D R++D + +K + + + P ++L A+ D +KLWD+ K +
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-K 247
Query: 136 CTQTFEGHSH--YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
C +T+ GH + Y + + F+ S S D + IWN+ + L H +
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 194 DYFITSDKVYLITGSDDFTVKVW 216
T + + +D T+K+W
Sbjct: 308 ACHPTENIIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 72/289 (24%), Positives = 131/289 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P W+ +S + IW + EK++ + + + + +V SD
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++++D ++ +K + H +Y+ +P +++ S D+ +++WD K +C +T
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCLKT 166
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKGINCIDYFIT 198
HS V FN +D + S+S DG +IW+ S TL D ++ + F
Sbjct: 167 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSP 224
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTI 255
+ K Y++ + D T+K+WDY C++ GH N + + + + I++ SED +
Sbjct: 225 NGK-YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
IWN T + L + V S N +A +K+ S
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 226 (84.6 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 52/171 (30%), Positives = 95/171 (55%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H + S+ P ++ ++S DKLIK+W ++ +E +T GH + A++ D N
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWS-SDSN 100
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
SAS D T++IW++ S TL H + C ++ S+ + ++GS D +V++WD
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI--VSGSFDESVRIWDV 158
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
+T C++ L H++ V+AV F+ + +I+++S DG IW+ + + TL
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 49/162 (30%), Positives = 86/162 (53%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N+ T GH+ V F+P AS+S D I+IW + T+ H+ GI+
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +SD L++ SDD T+K+WD + C++ L+GH+N V F+P+ +I++ S D
Sbjct: 93 VAW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCD 293
++ IW+ T + TL + + V ++ + + GS V+ D
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 158 (60.7 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 46/203 (22%), Positives = 86/203 (42%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S+ V +F+P +++ + +V IW+ + K++ PV F IV
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 77 GSDDKFIRVFDYNTMASVKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
S D R++D + +K + + + P ++L A+ D +KLWD+ K +
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-K 247
Query: 136 CTQTFEGHSH--YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
C +T+ GH + Y + + F+ S S D + IWN+ + L H +
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 194 DYFITSDKVYLITGSDDFTVKVW 216
T + + +D T+K+W
Sbjct: 308 ACHPTENIIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 72/289 (24%), Positives = 131/289 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P W+ +S + IW + EK++ + + + + +V SD
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++++D ++ +K + H +Y+ +P +++ S D+ +++WD K +C +T
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCLKT 166
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKGINCIDYFIT 198
HS V FN +D + S+S DG +IW+ S TL D ++ + F
Sbjct: 167 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSP 224
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTI 255
+ K Y++ + D T+K+WDY C++ GH N + + + + I++ SED +
Sbjct: 225 NGK-YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
IWN T + L + V S N +A +K+ S
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 226 (84.6 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 52/171 (30%), Positives = 95/171 (55%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H + S+ P ++ ++S DKLIK+W ++ +E +T GH + A++ D N
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWS-SDSN 100
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
SAS D T++IW++ S TL H + C ++ S+ + ++GS D +V++WD
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI--VSGSFDESVRIWDV 158
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
+T C++ L H++ V+AV F+ + +I+++S DG IW+ + + TL
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 49/162 (30%), Positives = 86/162 (53%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N+ T GH+ V F+P AS+S D I+IW + T+ H+ GI+
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +SD L++ SDD T+K+WD + C++ L+GH+N V F+P+ +I++ S D
Sbjct: 93 VAW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCD 293
++ IW+ T + TL + + V ++ + + GS V+ D
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 158 (60.7 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 46/203 (22%), Positives = 86/203 (42%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S+ V +F+P +++ + +V IW+ + K++ PV F IV
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 77 GSDDKFIRVFDYNTMASVKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
S D R++D + +K + + + P ++L A+ D +KLWD+ K +
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-K 247
Query: 136 CTQTFEGHSH--YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
C +T+ GH + Y + + F+ S S D + IWN+ + L H +
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 194 DYFITSDKVYLITGSDDFTVKVW 216
T + + +D T+K+W
Sbjct: 308 ACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 279 (103.3 bits), Expect = 6.0e-24, P = 6.0e-24
Identities = 67/251 (26%), Positives = 112/251 (44%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
++ D + SV F P + ++ T+ +W + K +PVR+ F A
Sbjct: 56 YVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ 115
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
++ S+DK I+V++ + H ++R P +++ S+DK IK+WD
Sbjct: 116 FLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TT 174
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N +C F + AFNP ASA D T++IW++ + H G+NC
Sbjct: 175 NKQCVNNFSDFVGFANFVAFNPNG-TCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNC 233
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + + YLIT S D T+K+ D + L+GHT V V F + + D
Sbjct: 234 VSFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGAD 291
Query: 253 GTILIWNATTF 263
+L+W T F
Sbjct: 292 AQVLLWR-TNF 301
Score = 259 (96.2 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 72/289 (24%), Positives = 124/289 (42%)
Query: 3 TPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPV 62
+P + +E+ F + SVDF P + + + +W+ Q +
Sbjct: 4 SPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVI 63
Query: 63 RTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDD 122
+ +F + + S D+ IR++ + EF+AH +RS+ F+ +AS+D
Sbjct: 64 TSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASED 123
Query: 123 KLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT 182
K IK+W+ + + H+H+V + F+P D S S D TI+IW+ +
Sbjct: 124 KSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
N + + + + + D TVK+WD +Q + H+ V V FHP
Sbjct: 182 FSDFVGFANFVAF--NPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPS 239
Query: 243 LRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+ITAS DGT+ I + RL TL V+++ + KG G
Sbjct: 240 GNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSG 288
Score = 228 (85.3 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 62/246 (25%), Positives = 107/246 (43%)
Query: 52 EKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP 111
E+ K + + + F + GS D F+ ++ A + H+D I S+ P
Sbjct: 11 ERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSP 70
Query: 112 TFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQI 171
+ +AS D+ I+LW +K + ++ F+ H+ V F+ D ASAS D +I++
Sbjct: 71 LGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSA-DGQFLASASEDKSIKV 128
Query: 172 WNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
WNM ++L H + C + + D +++ S+D T+K+WD K CV
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKF--SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFV 186
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
V F+P I +A D T+ IW+ +L V + + N +
Sbjct: 187 GFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITA 246
Query: 292 CDNGTL 297
+GTL
Sbjct: 247 SSDGTL 252
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 71/289 (24%), Positives = 131/289 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V +V F P W+ +S + IW + EK++ + + + +V GSD
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 134
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++V++ +T S+K + H +Y+ +P +++ S D+ +++WD + +C +T
Sbjct: 135 DKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VRTGKCLKT 193
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKGINCIDYFIT 198
HS V FN +D + S+S DG +IW+ S TL D ++ + F
Sbjct: 194 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSP 251
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTI 255
+ K Y++ + D T+K+WDY C++ GH N + + + + I++ SED +
Sbjct: 252 NGK-YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMV 310
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
IWN + + L + V N +A +K+ S
Sbjct: 311 YIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359
Score = 209 (78.6 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 47/171 (27%), Positives = 92/171 (53%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H + ++ P ++ ++S DKLIK+W ++ +E +T GH + A++ D
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWS-SDSR 127
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
S S D T+++W + + + TL H + C ++ S+ + ++GS D +V++WD
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLI--VSGSFDESVRIWDV 185
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
T C++ L H++ V+AV F+ + +I+++S DG IW+ + + TL
Sbjct: 186 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Score = 206 (77.6 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 50/162 (30%), Positives = 86/162 (53%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N+ T GH+ V F+P AS+S D I+IW + T+ H+ GI+
Sbjct: 61 NYTLKFTLAGHTKAVSAVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 119
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +SD L++GSDD T+KVW+ T ++ L+GH+N V F+P+ +I++ S D
Sbjct: 120 VAW--SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 177
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCD 293
++ IW+ T + TL + + V ++ + + GS V+ D
Sbjct: 178 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 219
Score = 178 (67.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 49/207 (23%), Positives = 89/207 (42%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S+ V +F+P +++ + +V IW+ + K++ PV F IV
Sbjct: 156 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 215
Query: 77 GSDDKFIRVFDYNTMASVKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
S D R++D + +K + + + P ++L A+ D +KLWD+ K +
Sbjct: 216 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-K 274
Query: 136 CTQTFEGHSH--YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
C +T+ GH + Y + + F+ S S D + IWN+ S L H + C
Sbjct: 275 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCT 334
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYET 220
T + + +D T+K+W +T
Sbjct: 335 ACHPTENIIASAALENDKTIKLWKSDT 361
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 73/297 (24%), Positives = 128/297 (43%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S + SV F P W+ +S + IW + +K++ + + + +V
Sbjct: 39 SAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVS 98
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
SDDK ++V+D + +K + H D++ +P +++ S D+ +K+W+ K +C
Sbjct: 99 ASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE-VKTGKC 157
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKGINCIDY 195
+T HS + FN + S S DG +IW+ S TL D ++ +
Sbjct: 158 LKTLSAHSDPISAVNFNCNG-SLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVK- 215
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI-----IITAS 250
F + K Y++T + D T+K+WDY C++ GH N C + +++ S
Sbjct: 216 FSPNGK-YILTATLDNTLKLWDYSRGRCLKTYTGHKNE--KYCLFASFSVTGRKWVVSGS 272
Query: 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
ED + IWN T + L + V S N +A +K+ SS C
Sbjct: 273 EDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW-SSDC 328
Score = 221 (82.9 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 52/172 (30%), Positives = 94/172 (54%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H I S+ P ++ +++ D LI +W ++ N C +T GHS + A++ D +
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGN--CKKTLYGHSLEISDVAWS-SDSS 94
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
SAS D T+++W+M S TL H + C D+ S+ + ++GS D +VK+W+
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLI--VSGSFDESVKIWEV 152
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS 270
+T C++ L H++ ++AV F+ +I++ S DG IW+A + + TL+
Sbjct: 153 KTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA 204
Score = 202 (76.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 49/175 (28%), Positives = 84/175 (48%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N+ T GHS + F+P AS++ D I IW K TL H I+
Sbjct: 28 NYALRLTLAGHSAAISSVKFSPNG-EWLASSAADALIIIWGAYDGNCKKTLYGHSLEISD 86
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +SD L++ SDD T+KVWD + C++ L+GH++ V F+P +I++ S D
Sbjct: 87 VAW--SSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
++ IW T + TLS+ + + ++ + + + G +G + S C
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQC 199
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/293 (27%), Positives = 125/293 (42%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+E+ F D V VDF + + T+ IW+ Q+ V F
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
H + GS DK +R++ N F AH +RS+ ++TASDDK +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ + H ++V + F+P D SAS D T+++W+ S + H
Sbjct: 131 STHRQ-RFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
+ +D F S G D+ TVKVWD T VQ + H+ V A+ FHP +IT
Sbjct: 189 FVTYVD-FHPSGTCIAAAGMDN-TVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLIT 246
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLIVK 300
AS D T+ I + RL TL ++ + + G + G D ++ K
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 61/248 (24%), Positives = 110/248 (44%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F D V V+F P+ + + TV IW + + + + VR+ F +
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+V SDDK ++V+ + + H +++R P +++ASDDK +KLWD +
Sbjct: 117 LLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KT 175
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ EC ++ H +V F+P A+A +D T+++W+ + H +N
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNA 234
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + + YLIT S D T+K+ D + L GH T V F + D
Sbjct: 235 LSFHPSGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Query: 253 GTILIWNA 260
+++W +
Sbjct: 293 EQVMVWKS 300
Score = 172 (65.6 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 47/174 (27%), Positives = 84/174 (48%)
Query: 140 FEGHSHYVMQSAFNPKDLNT--FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
F+GH V F+ LNT AS S+D T+ IW+M + + H+ + C++ F
Sbjct: 15 FKGHRDAVTCVDFS---LNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN-FS 70
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
S + L +GS D TV++W K + HT V +V F + ++++TAS+D T+ +
Sbjct: 71 PSGHL-LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKV 129
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
W+ R +L+ + V + + D+ T VK+ + + + V+
Sbjct: 130 WSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT--VKLWDKTSRECVH 181
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 272 (100.8 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 71/238 (29%), Positives = 115/238 (48%)
Query: 23 VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTD--SPVRTAKFVAREHWIVCGSDD 80
+ F+P V T +W+ Q+ E+ V +T + + + F I+ GS D
Sbjct: 183 LSFNPQSTVVATGSMDTTAKLWDI--QSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFD 240
Query: 81 KFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTF 140
+ V+D +T V H I S +LT S DK LWD + +C T
Sbjct: 241 HTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWD-ATSGKCVATL 299
Query: 141 EGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSD 200
GH ++ S F+ A+AS DGT +++N + L+ HE I+ I + +
Sbjct: 300 TGHDDEILDSCFDYTG-KLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGN 358
Query: 201 KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
+ L+TGS D T ++WD +T C+Q+LEGHT+ + + F+ + I+IT S+D + IW
Sbjct: 359 R--LLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 267 (99.0 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 67/234 (28%), Positives = 114/234 (48%)
Query: 75 VCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVH-PTFPFVLTASDDKLIKLWDWEKN 133
+ GS D+ +V+D + + E H + + ++A + P + T S DK KLW E
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETG 167
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+C TF GH+ ++ +FNP+ A+ S+D T ++W++ S TL H I +
Sbjct: 168 -KCYHTFRGHTAEIVCLSFNPQS-TVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISL 225
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D++ ITGS D TV VWD T V L GH +++ F + +I+T S D
Sbjct: 226 SFDTSGDRI--ITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDK 283
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
T ++W+AT+ + TL+ + + + +A +GT V + C
Sbjct: 284 TCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKC 337
Score = 228 (85.3 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 63/223 (28%), Positives = 97/223 (43%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
I GS DK +++ T F H I L+ +P V T S D KLWD +
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG 209
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
E T GH ++ +F+ + + S D T+ +W+ + TL H I+
Sbjct: 210 EEVV-TLTGHLAEIISLSFDTSG-DRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSA 267
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ D ++TGS D T +WD + CV L GH + + CF ++I TAS DG
Sbjct: 268 --LFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGT 296
T ++NATT + L + I + N++ G + T
Sbjct: 326 TARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKT 368
Score = 220 (82.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 65/247 (26%), Positives = 109/247 (44%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
P+ TA + +V +K + D+N K AH + ++A++ +T S
Sbjct: 53 PLITASRTKQVRLLVQRLQEKLRQHCDHNFYL-FKVLRAHILPLTNVALNKAGSCFITGS 111
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D+ K+WD E T EGH + V AFN + A+ S D T ++W+ ++
Sbjct: 112 YDRTCKVWDTASGEEL-HTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCY 170
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
T H I C+ + + TGS D T K+WD ++ V L GH + ++ F
Sbjct: 171 HTFRGHTAEIVCLSF--NPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFD 228
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300
IIT S D T+++W+A+T R +TL + S + + + G + T ++
Sbjct: 229 TSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLW 288
Query: 301 IGNSSGC 307
S C
Sbjct: 289 DATSGKC 295
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 46/196 (23%), Positives = 86/196 (43%)
Query: 22 SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDK 81
S+ F + ++ + TV +W+ + ++ + + +A F I+ GS DK
Sbjct: 224 SLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDK 283
Query: 82 FIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE 141
++D + V H+D I T + TAS D ++++ +C E
Sbjct: 284 TCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTR-KCITKLE 342
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI-NCIDYFITSD 200
GH + + +FNP+ N + S D T +IW++ + L+ H I +C F
Sbjct: 343 GHEGEISKISFNPQG-NRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCA--FNYKG 399
Query: 201 KVYLITGSDDFTVKVW 216
+ +ITGS D + ++W
Sbjct: 400 NI-VITGSKDNSCRIW 414
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 279 (103.3 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 75/246 (30%), Positives = 117/246 (47%)
Query: 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRT-AKFVAREHW 73
+K D VD P P V + + + ++Y ++ + PV R++
Sbjct: 320 EKKDSEFPVDMQP-DPNVTSCTENVSAAKFDYKLNNI---FRLHELPVSCIVMHPCRDYL 375
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
I C S+D+ ++ + H D++ HP+ + T+S D IKLWD K
Sbjct: 376 ISC-SEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKG 434
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
ECT T EGH+H V ++ + ASASLD T +IW+++S ++TL H +N I
Sbjct: 435 -ECTLTLEGHNHAVWSCTWHSCG-DFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSI 492
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
++F S+ L+T S D T+ VWD T C Q L GH ++V F P II + G
Sbjct: 493 EFFPFSN--ILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARG 550
Query: 254 TILIWN 259
+W+
Sbjct: 551 VTKLWD 556
Score = 238 (88.8 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 55/208 (26%), Positives = 106/208 (50%)
Query: 86 FDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH 145
FDY + ++ F HE + + +HP ++++ S+D+L K+ + T GH+
Sbjct: 348 FDYK-LNNI--FRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQG-NVLLTGSGHTD 403
Query: 146 YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLI 205
++ F+P + A++S D TI++W+++ TL+ H + + D ++
Sbjct: 404 WLSGCCFHPSG-SKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGD--FVA 460
Query: 206 TGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL 265
+ S D T K+WD ++ C L GHT++V ++ F P I++TAS D T+ +W+A T +
Sbjct: 461 SASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKC 520
Query: 266 QNTLSSGLERVWSIGYKKGSNQVAFGCD 293
+ +L + V + + +A CD
Sbjct: 521 EQSLYGHMHSVNDATFTPRGHIIA-SCD 547
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 55/242 (22%), Positives = 106/242 (43%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D + FHP+ + S T+ +W+ + +++ + V + + + ++
Sbjct: 402 TDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVAS 461
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
S D +++D N+ H D + S+ P +LTAS DK + +WD + +C
Sbjct: 462 ASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWD-ARTGKC 520
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
Q+ GH H V + F P+ + AS G ++W+ ++D N ++ F
Sbjct: 521 EQSLYGHMHSVNDATFTPRG-HIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVN-F 578
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
S +V L S + + + D ++ + L GH + V +V F + + DGTI
Sbjct: 579 DQSGRV-LAQASANGIIHLLDLKSGQ-IHKLVGHESEVHSVVFSHLGENLYSGGSDGTIR 636
Query: 257 IW 258
+W
Sbjct: 637 LW 638
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 204 LITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTF 263
L T S D T+K+WD C LEGH + V + +H + +AS D T IW+ +
Sbjct: 417 LATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSE 476
Query: 264 RLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCD 308
R + TL + V SI + SN + + TL V + C+
Sbjct: 477 RCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCE 521
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 274 (101.5 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 79/305 (25%), Positives = 130/305 (42%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+E+ F + S+D P + + + + +WN+ V + +F
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ + S D+ +R++ + EF+AH +RS+ F+ TAS+DK IK+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ + H+H+V + F+P D S S D TI+IW+ +
Sbjct: 130 SMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
N +D F S GSD TVKVWD +Q + H+ V + FHP ++T
Sbjct: 188 FANFVD-FNPSGTCIASAGSDQ-TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVT 245
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG-CDNGTLIVKIG-NSSG 306
AS DGT+ I + RL TL V+++ + KG A G D L+ + +
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELH 305
Query: 307 CDSVN 311
C +N
Sbjct: 306 CKGLN 310
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 271 (100.5 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 80/298 (26%), Positives = 127/298 (42%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
P + +E+ F D V SVDF + + + +W+ QT V
Sbjct: 6 PEDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVT 65
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
F H + GS DK +R++ N F AH +RS+ +TASDDK
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 125
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
+K+W + + + H ++V + F+P D SAS D T+++W+ S +
Sbjct: 126 TVKVWSTHRQ-KFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSY 183
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
H + +D F S G D+ TVKVWD T +Q + H+ V A+ FHP
Sbjct: 184 CEHGGFVTYVD-FHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLIVK 300
++TAS D T+ I + RL TL ++ + + G + G D ++ K
Sbjct: 242 NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 60/248 (24%), Positives = 110/248 (44%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F D V V+F P+ + + TV IW + + + + VR+ F +
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
V SDDK ++V+ + + H +++R P +++ASDDK +KLWD +
Sbjct: 117 SFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KT 175
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ EC ++ H +V F+P A+A +D T+++W++ + H +N
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + + YL+T S D T+K+ D + L GH T V F + D
Sbjct: 235 LSFHPSGN--YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Query: 253 GTILIWNA 260
+++W +
Sbjct: 293 EQVMVWKS 300
Score = 160 (61.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 140 FEGHSHYVMQSAFNPKDLNT--FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
F+GH V F+ LNT AS S+D + +W+M + H+ + C++ F
Sbjct: 15 FKGHRDAVTSVDFS---LNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVN-FS 70
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
S + L +GS D TV++W K + HT V +V F + + +TAS+D T+ +
Sbjct: 71 PSGHL-LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
W+ + +LS + V + + D+ T VK+ + + + V+
Sbjct: 130 WSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT--VKLWDKTSRECVH 181
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 63/198 (31%), Positives = 103/198 (52%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + S P FVL++S D I+LW + N ++GH++ V + F+P +
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLV-CYKGHNYPVWDAQFSPFG-HY 474
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
FAS S D T +IW+MD + H ++C+ + + Y+ TGS D TV++WD +
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCN--YIATGSSDKTVRLWDVQ 532
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
T CV+I GH + V ++ P+ R + + EDGTI++W+ +T R L VWS+
Sbjct: 533 TGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSL 592
Query: 280 GYKKGSNQVAFGCDNGTL 297
Y + +A G + T+
Sbjct: 593 SYSGEGSLLASGSADCTV 610
Score = 232 (86.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 62/228 (27%), Positives = 105/228 (46%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S V S F P +VL+S T+ +W+ K + PV A+F H+
Sbjct: 418 SGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFAS 477
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
S D+ R++ + + ++ H + + HP ++ T S DK ++LWD + EC
Sbjct: 478 CSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTG-EC 536
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ F GH V+ A +P D AS DGTI +W++ ++ L H + + Y
Sbjct: 537 VRIFIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSY- 594
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILE---GHTNNVTAVCFHP 241
+ + L +GS D TVK+WD + T + E G++N + ++ P
Sbjct: 595 -SGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFP 641
Score = 181 (68.8 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 44/202 (21%), Positives = 95/202 (47%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV +A F +++ S D IR++ A++ ++ H + P + + S
Sbjct: 420 PVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCS 479
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D+ ++W ++ + + GH V ++P + N A+ S D T+++W++ +
Sbjct: 480 HDRTARIWSMDRI-QPLRIMAGHLSDVDCVQWHP-NCNYIATGSSDKTVRLWDVQTGECV 537
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H + + ++ D Y+ +G +D T+ +WD T C+ L GH + V ++ +
Sbjct: 538 RIFIGHRSMV--LSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYS 595
Query: 241 PELRIIITASEDGTILIWNATT 262
E ++ + S D T+ +W+ T+
Sbjct: 596 GEGSLLASGSADCTVKLWDVTS 617
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/158 (25%), Positives = 70/158 (44%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GHS V + F+P + S+S D TI++W+ +A H + D +
Sbjct: 416 GHSGPVYSATFSPPG-DFVLSSSADTTIRLWSTKLNANLVCYKGHNYPV--WDAQFSPFG 472
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
Y + S D T ++W + ++I+ GH ++V V +HP I T S D T+ +W+
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQ 532
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
T V S+ +A G ++GT+++
Sbjct: 533 TGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 570
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 274 (101.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 78/291 (26%), Positives = 125/291 (42%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+E+ F + S+D P + + + + +WN+ V + +F
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ + S D+ +R++ + EF+AH +RS+ F+ TAS+DK IK+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ + H+H+V + F+P D S S D TI+IW+ +
Sbjct: 130 SMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
N +D F S GSD TVKVWD +Q + H+ V + FHP +IT
Sbjct: 188 FANFVD-FNPSGTCIASAGSDQ-TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLIT 245
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG-CDNGTLI 298
AS DGT+ I + RL TL V+++ + KG A G D L+
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLL 296
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 68/251 (27%), Positives = 110/251 (43%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
++ D V SV F P + ++ TV +W + K +PVR+ F A
Sbjct: 56 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 115
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
++ S+DK I+V+ + H ++R P +++ S+DK IK+WD
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TT 174
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N +C F + FNP ASA D T+++W++ + H G+NC
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPSG-TCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 233
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
I + + + YLIT S D T+K+ D + L+GHT V V F + + D
Sbjct: 234 ISFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Query: 253 GTILIWNATTF 263
+L+W T F
Sbjct: 292 TQVLLWR-TNF 301
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 71/289 (24%), Positives = 130/289 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P W+ +S + IW + EK++ + + + + +V SD
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++++D ++ +K + H +Y+ +P +++ S D+ +++WD K +C +T
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCLKT 166
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKGINCIDYFIT 198
HS V FN +D + S+S DG +IW+ S TL D ++ + F
Sbjct: 167 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSP 224
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTI 255
+ K Y++ + D T+K+WDY C++ H N + + + + I++ SED +
Sbjct: 225 NGK-YILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
IWN T + L + V S N +A +K+ S
Sbjct: 284 YIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 226 (84.6 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 52/171 (30%), Positives = 95/171 (55%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H + S+ P ++ ++S DKLIK+W ++ +E +T GH + A++ D N
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWS-SDSN 100
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
SAS D T++IW++ S TL H + C ++ S+ + ++GS D +V++WD
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI--VSGSFDESVRIWDV 158
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
+T C++ L H++ V+AV F+ + +I+++S DG IW+ + + TL
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 49/162 (30%), Positives = 86/162 (53%)
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N+ T GH+ V F+P AS+S D I+IW + T+ H+ GI+
Sbjct: 34 NYTLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +SD L++ SDD T+K+WD + C++ L+GH+N V F+P+ +I++ S D
Sbjct: 93 VAW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCD 293
++ IW+ T + TL + + V ++ + + GS V+ D
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 150 (57.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 45/203 (22%), Positives = 85/203 (41%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S+ V +F+P +++ + +V IW+ + K++ PV F IV
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 77 GSDDKFIRVFDYNTMASVKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
S D R++D + +K + + + P ++L A+ D +KLWD+ K +
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-K 247
Query: 136 CTQTFEGHSH--YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
C +T+ H + Y + + F+ S S D + IWN+ + L H +
Sbjct: 248 CLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVIST 307
Query: 194 DYFITSDKVYLITGSDDFTVKVW 216
T + + +D T+K+W
Sbjct: 308 ACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 268 (99.4 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 68/251 (27%), Positives = 110/251 (43%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
++ D V SV F P + ++ TV +W + K +PVR+ F A
Sbjct: 14 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 73
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
++ S+DK I+V+ + H ++R P +++ S+DK IK+WD
Sbjct: 74 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TT 132
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N +C F + FNP ASA D T+++W++ + H G+NC
Sbjct: 133 NKQCVNNFSDSVGFANFVDFNPSG-TCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 191
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
I + + + YLIT S D T+K+ D + L+GHT V V F + + D
Sbjct: 192 ISFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 249
Query: 253 GTILIWNATTF 263
+L+W T F
Sbjct: 250 TQVLLWR-TNF 259
Score = 259 (96.2 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 73/257 (28%), Positives = 112/257 (43%)
Query: 43 IWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHED 102
+WN+ V + +F + + S D+ +R++ + EF+AH
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 103 YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFAS 162
+RS+ F+ TAS+DK IK+W + + H+H+V + F+P D S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVS 119
Query: 163 ASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT 222
S D TI+IW+ + N +D F S GSD TVKVWD
Sbjct: 120 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD-FNPSGTCIASAGSDQ-TVKVWDVRVNK 177
Query: 223 CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
+Q + H+ V + FHP +ITAS DGT+ I + RL TL V+++ +
Sbjct: 178 LLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 237
Query: 283 KGSNQVAFG-CDNGTLI 298
KG A G D L+
Sbjct: 238 KGGELFASGGADTQVLL 254
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 52/205 (25%), Positives = 94/205 (45%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
EF + V+SVDF ++ + ++ +W+ + Q S+ VR AKF
Sbjct: 55 EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG 114
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
IV S+DK I+++D V F + + +P+ + +A D+ +K+WD
Sbjct: 115 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 174
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
N + Q ++ HS V +F+P N +AS DGT++I ++ +TL H +
Sbjct: 175 VN-KLLQHYQVHSGGVNCISFHPSG-NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF 232
Query: 192 CIDYFITSDKVYLITGSDDFTVKVW 216
+ F +++ +G D V +W
Sbjct: 233 TVS-FSKGGELFA-SGGADTQVLLW 255
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 275 (101.9 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 72/297 (24%), Positives = 136/297 (45%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKS-VKVTDSPVRTAKF 67
I+K IQ D + Q ASL S VC++ +H+ + ++ D A
Sbjct: 426 IKKMIIQVEDSRSKIKLGAIQ----ASLPS--VCMYTFHNTNNNMTCIEFNDDSTLVAAG 479
Query: 68 VAREH---WIVCGSDDKFIRVFD-YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+ W + G K + D + + ++ H + ++ P ++L+ S+DK
Sbjct: 480 FQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDK 539
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
++LW + + +++GH+ V F+P + F +AS D T ++W D
Sbjct: 540 TVRLWSLD-TYTALVSYKGHTQPVWDVKFSPLG-HYFVTASHDQTARLWATDHIYPLRIF 597
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
H ++C+++ S+ Y+ TGS D T ++WD T CV++ GHTN+V + P+
Sbjct: 598 AGHINDVDCVEFHPNSN--YVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDG 655
Query: 244 RIIITASEDGTILIWN-ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC-DNGTLI 298
R + + EDG I +W+ + RL++ ++S+ + + + GC DN +
Sbjct: 656 RWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRV 712
Score = 225 (84.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 58/212 (27%), Positives = 97/212 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
++ I S V V F P ++L+ TV +W+ + T S K PV KF
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPL 570
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
H+ V S D+ R++ + + ++ F H + + + HP +V T S DK ++WD
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDV 630
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
C + F GH++ V A +P D AS DG I +W++ S ++ H +
Sbjct: 631 HTG-NCVRVFLGHTNSVNCLAVSP-DGRWLASGGEDGIICVWDIGSGRRLKSMRGHARA- 687
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDYETKT 222
+ + D L++G D +V+VWD + T
Sbjct: 688 SLYSLAFSRDGTVLVSGCADNSVRVWDVKKNT 719
Score = 166 (63.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 47/176 (26%), Positives = 77/176 (43%)
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
D K E T+ GHS V +F+P D S S D T+++W++D+ A + H +
Sbjct: 502 DRHKPQENTRKLIGHSGPVYGVSFSP-DNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQ 560
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
+ + + Y +T S D T ++W + ++I GH N+V V FHP + T
Sbjct: 561 PVWDVKFSPLGH--YFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFT 618
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV-KIGN 303
S D T +W+ T V + +A G ++G + V IG+
Sbjct: 619 GSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGS 674
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 265 (98.3 bits), Expect = 8.3e-23, P = 8.3e-23
Identities = 80/293 (27%), Positives = 125/293 (42%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+E+ F D V VDF + + T+ IW+ Q+ V F
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
H + GS DK +R++ N F AH +RS+ ++TASDDK +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ + H ++V + F+P D SAS D T+++W+ S + H
Sbjct: 131 STHRQ-RFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECIHSYCEHGG 188
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
+ +D F S G D+ TVKVWD T +Q + H+ V A+ FHP +IT
Sbjct: 189 FVTYVD-FHPSGTCIAAAGMDN-TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLIT 246
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLIVK 300
AS D T+ I + RL TL ++ + + G + G D ++ K
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 252 (93.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 61/248 (24%), Positives = 110/248 (44%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F D V V+F P+ + + TV IW + + + + VR+ F +
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+V SDDK ++V+ + + H +++R P +++ASDDK +KLWD +
Sbjct: 117 SLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KT 175
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ EC ++ H +V F+P A+A +D T+++W+ + H +N
Sbjct: 176 SRECIHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNA 234
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + + YLIT S D T+K+ D + L GH T V F + D
Sbjct: 235 LSFHPSGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Query: 253 GTILIWNA 260
+++W +
Sbjct: 293 EQVMVWKS 300
Score = 167 (63.8 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 46/174 (26%), Positives = 83/174 (47%)
Query: 140 FEGHSHYVMQSAFNPKDLNT--FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
F+GH V F+ LNT AS S+D T+ IW+M + + H+ + C++ F
Sbjct: 15 FKGHRDAVTCVDFS---LNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN-FS 70
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
S + L +GS D TV++W K + HT V +V F + + ++TAS+D T+ +
Sbjct: 71 PSGHL-LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV 129
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
W+ R +L+ + V + + D+ T VK+ + + + ++
Sbjct: 130 WSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT--VKLWDKTSRECIH 181
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 265 (98.3 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 76/298 (25%), Positives = 128/298 (42%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
P + +E+ F D + SVDF + + + +W+ Q+ V
Sbjct: 6 PEDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVT 65
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
F H + GS DK +R++ N F AH +RS+ ++TASDDK
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDK 125
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
+K+W + + + H ++V + F+P D SAS D T+++W+ S +
Sbjct: 126 TVKVWSTHRQ-KFLFSLSQHINWVRCARFSP-DGRLIVSASDDKTVKLWDKTSRECVHSY 183
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
H + +D+ + + S D TVKVWD T +Q + H+ V A+ FHP
Sbjct: 184 CEHGGFVTYVDFHPSG--TCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLIVK 300
++TAS D T+ I + RL TL ++ + + G + G D ++ K
Sbjct: 242 NYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 258 (95.9 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 61/248 (24%), Positives = 112/248 (45%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F D V V+F P+ + + TV IW + + + + VR+ F +
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+V SDDK ++V+ + + H +++R P +++ASDDK +KLWD +
Sbjct: 117 SLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-KT 175
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ EC ++ H +V F+P A+AS+D T+++W++ + H +N
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSG-TCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + + YL+T S D T+K+ D + L GH T V F + D
Sbjct: 235 LSFHPSGN--YLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Query: 253 GTILIWNA 260
+++W +
Sbjct: 293 EQVMVWKS 300
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 44/174 (25%), Positives = 82/174 (47%)
Query: 140 FEGHSHYVMQSAFNPKDLNT--FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
F+GH + F+ LNT AS S+D + +W+M + + H+ + C++ F
Sbjct: 15 FKGHRDAITSVDFS---LNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVN-FS 70
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
S + L +GS D TV++W K + HT V +V F + + ++TAS+D T+ +
Sbjct: 71 PSGHL-LASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV 129
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
W+ + +LS + V + + D+ T VK+ + + + V+
Sbjct: 130 WSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKT--VKLWDKTSRECVH 181
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 85/306 (27%), Positives = 135/306 (44%)
Query: 1 METPLE-LQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTV--CIWNYHSQTTEKSVKV 57
M P E +E+ F D V VDF + + L SG++ C+ +H + ++ +
Sbjct: 33 MALPQEDPSLERHFKGHRDAVTCVDFS----FNMKQLASGSMDSCLMVWHMKPQSRAYRF 88
Query: 58 TD--SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115
T V F H + GS DK +R++ N F AH +RS+
Sbjct: 89 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQS 148
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+TASDDK IK+W + + + H ++V + F+P D SAS D T+++W+
Sbjct: 149 FVTASDDKTIKVWSTHRQ-KFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKT 206
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
S + H + +D F S G D+ TVKVWD T +Q + H+ V
Sbjct: 207 SRECVHSYCEHGGFVTYVD-FHPSGTCVAAAGMDN-TVKVWDVRTHRLLQHYQLHSAAVN 264
Query: 236 AVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDN 294
A+ FHP ++TAS D T+ I + RL TL ++ + + G + G D
Sbjct: 265 ALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDE 324
Query: 295 GTLIVK 300
++ K
Sbjct: 325 QVMVWK 330
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 61/248 (24%), Positives = 110/248 (44%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F D V V+F P+ + + TV IW + + + + VR+ F +
Sbjct: 88 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQ 147
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
V SDDK I+V+ + + H +++R P +++ASDDK +KLWD +
Sbjct: 148 SFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KT 206
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ EC ++ H +V F+P A+A +D T+++W++ + H +N
Sbjct: 207 SRECVHSYCEHGGFVTYVDFHPSG-TCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 265
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + + YL+T S D T+K+ D + L GH T V F + D
Sbjct: 266 LSFHPSGN--YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 323
Query: 253 GTILIWNA 260
+++W +
Sbjct: 324 EQVMVWKS 331
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/174 (26%), Positives = 82/174 (47%)
Query: 140 FEGHSHYV--MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
F+GH V + +FN K L AS S+D + +W+M + + H+ + C++ F
Sbjct: 46 FKGHRDAVTCVDFSFNMKQL---ASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN-FS 101
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
S + L +GS D TV++W K + HT V +V F + + +TAS+D TI +
Sbjct: 102 PSGHL-LASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKV 160
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
W+ + +LS + V + + D+ T VK+ + + + V+
Sbjct: 161 WSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT--VKLWDKTSRECVH 212
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 68/247 (27%), Positives = 111/247 (44%)
Query: 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV-KVTDSPVRTAKFVAREHWIVC 76
D V V F P+ V + TVC+W S E +V K + VR+ F + +V
Sbjct: 63 DAVMCVQFSPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVT 121
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
SDDK I+V+ + + H +++R P + +ASDDK +KLWD + + EC
Sbjct: 122 ASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD-KTSREC 180
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+F H + F+P A+A D T+++W++ + H +N + +
Sbjct: 181 IHSFCEHGGFANHVEFHPSG-TCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFH 239
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+ + YLIT S+D T+K+ D + L GH T V F + D ++
Sbjct: 240 PSGN--YLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVM 297
Query: 257 IWNATTF 263
+W T F
Sbjct: 298 VWK-TNF 303
Score = 208 (78.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 57/236 (24%), Positives = 97/236 (41%)
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
+ + F + + GS D ++++ H+D + + P+ V + S
Sbjct: 23 ITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSR 82
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF 181
DK + LW E T F+ H+ V F+ D + +AS D TI++W + F
Sbjct: 83 DKTVCLWVPSVKGEST-VFKAHTATVRSVHFS-SDGQSLVTASDDKTIKVWTVHRQKFLF 140
Query: 182 TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L H + C + + D + + SDD TVK+WD ++ C+ H V FHP
Sbjct: 141 SLSQHINWVRCARF--SPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHP 198
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
I A D T+ +W+ RL V S+ + N + ++ TL
Sbjct: 199 SGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTL 254
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/172 (23%), Positives = 74/172 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V+ F P + ++ TV +W+ S+ S +F I
Sbjct: 149 VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGT 208
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++V+D ++ ++ H + SL+ HP+ +++TAS+D +K+ D + T
Sbjct: 209 DKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEG-RLLYT 267
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF--TLDAHEKG 189
GH AF+ + + FAS D + +W + SAA + L H+ G
Sbjct: 268 LHGHQGPATCVAFS-RTGDFFASGGSDEQVMVWKTNFSAADYDGVLKTHKSG 318
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 74/276 (26%), Positives = 129/276 (46%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ +V F P ++ S TV IWN + E+++ V + A IV SD
Sbjct: 82 ISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASD 141
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK +++++ T+ K + H +Y+ +P V++ S D+ +++WD + C +T
Sbjct: 142 DKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWD-VRTGMCVKT 200
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
HS V +FN +D + S S DG ++IW+ + TL E F +
Sbjct: 201 LPAHSDPVSAVSFN-RDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPN 259
Query: 200 DKVYLITGSDDFTVKVWDY-ETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTI 255
K Y+++ + D T+K+WD+ + KT Q +GH NN + + + + II+ SED I
Sbjct: 260 GK-YILSSNLDNTLKLWDFGKGKTLKQY-QGHENNKYCIFANFSVTGGKWIISGSEDCKI 317
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+WN T + +L + V + N +A G
Sbjct: 318 YVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASG 353
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 65/226 (28%), Positives = 112/226 (49%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ I+ + K++K + V F + +V GS D+ +R++D T VK A
Sbjct: 144 TLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPA 203
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTF-EGHSHYVMQSAFNPKDLN 158
H D + +++ + + + S D L+++WD N +C +T + + V F+P
Sbjct: 204 HSDPVSAVSFNRDGSLITSGSYDGLVRIWD-TANGQCVKTLVDDENPPVAFVKFSPNG-K 261
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI--DYFITSDKVYLITGSDDFTVKVW 216
S++LD T+++W+ HE CI ++ +T K ++I+GS+D + VW
Sbjct: 262 YILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGK-WIISGSEDCKIYVW 320
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITAS--EDGTILIWNA 260
+ +TK VQ LEGHT V A HP +I + + D TI IW +
Sbjct: 321 NLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWRS 366
Score = 222 (83.2 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 50/174 (28%), Positives = 96/174 (55%)
Query: 134 WECTQTFEGHSHYVMQSAFNP--KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
++ T EGH+ + F+P K L T +S D T++IWNM + + TL H+ G+N
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGT---SSADKTVKIWNMSDLSCERTLTGHKLGVN 125
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASE 251
D+ ++D ++T SDD T+K+++ T + L+GHTN V F+P+ ++++ S
Sbjct: 126 --DFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSF 183
Query: 252 DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305
D ++ IW+ T TL + + V ++ + + + + G +G +V+I +++
Sbjct: 184 DESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDG--LVRIWDTA 235
Score = 217 (81.4 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 52/176 (29%), Positives = 90/176 (51%)
Query: 94 VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFN 153
+ E H I ++ P F+ T+S DK +K+W+ + C +T GH V A++
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMS-DLSCERTLTGHKLGVNDFAWS 130
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
D + +AS D T++I+ + + TL H + C ++ S V ++GS D +V
Sbjct: 131 A-DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV--VSGSFDESV 187
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
++WD T CV+ L H++ V+AV F+ + +I + S DG + IW+ + TL
Sbjct: 188 RIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTL 243
Score = 168 (64.2 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 46/168 (27%), Positives = 83/168 (49%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNY-HSQTTEKSVKVTDSPVRTAKFVAREHWIV 75
SD V +V F+ + + Y G V IW+ + Q + V + PV KF +I+
Sbjct: 205 SDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYIL 264
Query: 76 CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-----FVLTASDDKLIKLWDW 130
+ D ++++D+ ++K+++ HE+ + F ++++ S+D I +W+
Sbjct: 265 SSNLDNTLKLWDFGKGKTLKQYQGHEN--NKYCIFANFSVTGGKWIISGSEDCKIYVWNL 322
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASL--DGTIQIWNMDS 176
+ E Q+ EGH+ V+ S +P N AS +L D TI+IW DS
Sbjct: 323 QTK-EVVQSLEGHTQAVIASDCHPMQ-NMIASGALEPDNTIRIWRSDS 368
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 265 (98.3 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 67/251 (26%), Positives = 109/251 (43%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
++ D V S+ F P + ++ TV +W + K +PVR+ F A
Sbjct: 56 YVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQ 115
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+V S+DK I+V+ + H ++R P +++ S+DK IK+WD
Sbjct: 116 LLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TT 174
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N +C F + FNP ASA D ++IW++ + H G+NC
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPNG-TCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNC 233
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + L+T S D TVK+ D + L+GHT V V F + ++ + D
Sbjct: 234 LSFHPLGNS--LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGAD 291
Query: 253 GTILIWNATTF 263
+LIW T F
Sbjct: 292 AQVLIWR-TNF 301
Score = 244 (91.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 71/299 (23%), Positives = 128/299 (42%)
Query: 1 METPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS 60
+E P+ +E+ F + S DF P + + + + +W+
Sbjct: 5 LEDPI---LERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKD 61
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
V + +F + + + S D+ +R++ + EF+AH +RS+ ++TAS
Sbjct: 62 VVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTAS 121
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
+DK IK+W + + H+H+V + F+P D S S D TI+IW+ +
Sbjct: 122 EDKSIKVWSMFRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCV 179
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
N +D+ + + + D VK+WD +Q + H+ V + FH
Sbjct: 180 NNFSDSVGFANFVDF--NPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFH 237
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLI 298
P ++TAS DGT+ + + RL TL V+++ + K G + G D LI
Sbjct: 238 PLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLI 296
Score = 240 (89.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 64/209 (30%), Positives = 101/209 (48%)
Query: 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP 154
+ F+ H+ I S P + TAS D + LW + + + + GH V F+P
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYR-YVGHKDVVTSLQFSP 70
Query: 155 KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVK 214
+ N ASAS D T+++W +D AH + +D+ ++D L+T S+D ++K
Sbjct: 71 QG-NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDF--SADGQLLVTASEDKSIK 127
Query: 215 VWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLE 274
VW + + L HT+ V F P+ R+I++ SED TI IW+ T + N S
Sbjct: 128 VWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD--- 184
Query: 275 RVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
S+G+ +N V F NGT I G+
Sbjct: 185 ---SVGF---ANFVDFN-PNGTCIASAGS 206
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 263 (97.6 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 64/251 (25%), Positives = 110/251 (43%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
++ D V S+ F P + ++ TV +W + K +PVR+ F A
Sbjct: 56 YVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQ 115
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
++V S+DK I+V+ + H ++R P +++ S+DK IK+WD
Sbjct: 116 FLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTS 175
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+C F + F+P ASA D ++IW++ + H G+NC
Sbjct: 176 K-QCVNNFSDSVGFANFVDFSPNG-TCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNC 233
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + + L+T S D TVK+ D + L+GHT V V F + + + D
Sbjct: 234 LSFHPSGNS--LVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGAD 291
Query: 253 GTILIWNATTF 263
+L+W T+F
Sbjct: 292 AQVLVWR-TSF 301
Score = 256 (95.2 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 71/291 (24%), Positives = 126/291 (43%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+E+ F + S DF P + + + + +W+ V + +F
Sbjct: 10 LERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ + + S DK +R++ + EF+AH +RS+ F++TAS+DK IK+W
Sbjct: 70 PQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVW 129
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ + H+H+V + F+P D S S D TI+IW+ S
Sbjct: 130 SMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVG 187
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
N +D+ + + + + D V++WD +Q + H+ V + FHP ++T
Sbjct: 188 FANFVDF--SPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVT 245
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLI 298
AS DGT+ I + RL TL V+++ + K G + G D L+
Sbjct: 246 ASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLV 296
Score = 244 (91.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 64/207 (30%), Positives = 102/207 (49%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
F+ H+ I S P + TAS D + LW + + + + GH V F+P+
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYR-YVGHKDVVTSLQFSPQG 72
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
N ASAS D T+++W +D AH + +D+ ++D +L+T S+D ++KVW
Sbjct: 73 -NLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDF--SADGQFLVTASEDKSIKVW 129
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERV 276
+ + L HT+ V F P+ R+I++ SED TI IW+ T+ + N S
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSD----- 184
Query: 277 WSIGYKKGSNQVAFGCDNGTLIVKIGN 303
S+G+ +N V F NGT I G+
Sbjct: 185 -SVGF---ANFVDFS-PNGTCIASAGS 206
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 250 (93.1 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 58/194 (29%), Positives = 100/194 (51%)
Query: 108 AVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLD 166
AV PT ++L++S D+ I+LW + W+C ++GH V + P + F S D
Sbjct: 325 AVAPTNARWLLSSSADRTIRLWSLDL-WQCMVVYKGHDQPVWDLQWGPFG-HYFVSGGHD 382
Query: 167 GTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQI 226
T ++W D + HE+ ++C+ + S Y+ TGS D TV++W T V++
Sbjct: 383 KTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNS--AYVFTGSSDRTVRMWAVTTGNAVRM 440
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS-GLERVWSIGYKKGS 285
GHT N+TA+ + + + +A + G+IL+W+ RL + G +WS+ + S
Sbjct: 441 FTGHTGNITALACSRDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVES 500
Query: 286 NQVAFGCDNGTLIV 299
N + G +GT+ V
Sbjct: 501 NVLVSGGADGTVRV 514
Score = 192 (72.6 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 52/193 (26%), Positives = 89/193 (46%)
Query: 27 PTQP-WVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRV 85
PT W+L+S T+ +W+ K D PV ++ H+ V G DK R+
Sbjct: 328 PTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARL 387
Query: 86 FDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH 145
+ + + + F HE + + HP +V T S D+ +++W + F GH+
Sbjct: 388 WVTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTG-NAVRMFTGHTG 446
Query: 146 YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG-INCIDYFITSDKVYL 204
+ A + +D T ASA G+I +W++ + H KG I + + + S+ L
Sbjct: 447 NITALACS-RDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESN--VL 503
Query: 205 ITGSDDFTVKVWD 217
++G D TV+VWD
Sbjct: 504 VSGGADGTVRVWD 516
Score = 156 (60.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
++A P + S+S D TI++W++D H++ + + + Y ++G
Sbjct: 323 ENAVAPTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGH--YFVSGG 380
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268
D T ++W + +I GH +V VCFHP + T S D T+ +W TT
Sbjct: 381 HDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRM 440
Query: 269 LSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ + ++ + +A D+G++++
Sbjct: 441 FTGHTGNITALACSRDGKTLASADDHGSILL 471
Score = 155 (59.6 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 40/201 (19%), Positives = 86/201 (42%)
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
+P A W++ S D+ IR++ + + ++ H+ + L P + ++
Sbjct: 320 TPSENAVAPTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSG 379
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
DK +LW + + + F GH V F+P F +S D T+++W + + A
Sbjct: 380 GHDKTARLWVTDHIRQ-QRIFVGHEQDVDCVCFHPNSAYVFTGSS-DRTVRMWAVTTGNA 437
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH-TNNVTAVC 238
H I + + D L + D ++ +WD ++ + GH + ++
Sbjct: 438 VRMFTGHTGNITALA--CSRDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLS 495
Query: 239 FHPELRIIITASEDGTILIWN 259
+ E ++++ DGT+ +W+
Sbjct: 496 WSVESNVLVSGGADGTVRVWD 516
Score = 37 (18.1 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 7/51 (13%), Positives = 18/51 (35%)
Query: 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
D + +DF V A + + +W+ + + P + + +
Sbjct: 254 DGINCLDFSDDNLLVAAGMQESYIRVWSLDGKKIPSDDSADEPPTNSRRLI 304
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 72/275 (26%), Positives = 122/275 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ S F P ++ S TV IWN E+++ V + + +V SD
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASD 149
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK +++F+ T K + H +Y+ +P V++ S D+ +++WD K C +T
Sbjct: 150 DKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD-VKTGMCIKT 208
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
HS V +FN +D + AS S DG ++IW+ + TL E F +
Sbjct: 209 LPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTIL 256
K Y++ + D T+K+WD+ ++ GH N+ + + + + II+ SED I
Sbjct: 268 GK-YILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
IWN T + L + V + N +A G
Sbjct: 327 IWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Score = 248 (92.4 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 63/226 (27%), Positives = 112/226 (49%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ I+ + K++K ++ V F + +V GS D+ +R++D T +K A
Sbjct: 152 TLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPA 211
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTF-EGHSHYVMQSAFNPKDLN 158
H D + +++ + + + S D L+++WD N +C +T + + V F+P
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWD-TANGQCIKTLVDDENPPVAFVKFSPNGKY 270
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI--DYFITSDKVYLITGSDDFTVKVW 216
AS +LD T+++W+ HE CI ++ +T K ++I+GS+D + +W
Sbjct: 271 ILAS-NLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGK-WIISGSEDCKIYIW 328
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITAS--EDGTILIWNA 260
+ +T+ VQ LEGHT V A HP II + + D I IW +
Sbjct: 329 NLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRS 374
Score = 225 (84.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 52/175 (29%), Positives = 98/175 (56%)
Query: 133 NWECTQTFEGHSHYVMQSAFNP--KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
N++ T EGH+ + + F+P K L T +S D T++IWNMD + TL H+ G+
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGT---SSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS 250
N I + +SD +++ SDD T+K+++ T + L+GH N V F+P+ ++++ S
Sbjct: 133 NDIAW--SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGS 190
Query: 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305
D ++ IW+ T TL + + V ++ + + + +A G +G +V+I +++
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG--LVRIWDTA 243
Score = 218 (81.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 55/183 (30%), Positives = 95/183 (51%)
Query: 87 DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHY 146
+Y M ++ E H I S P ++ T+S DK +K+W+ + + C +T GH
Sbjct: 76 NYKLMCTL---EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD-HMICERTLTGHKLG 131
Query: 147 VMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLIT 206
V A++ D SAS D T++I+ + +S TL H + C ++ S V ++
Sbjct: 132 VNDIAWS-SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV--VS 188
Query: 207 GSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQ 266
GS D +V++WD +T C++ L H++ V+AV F+ + +I + S DG + IW+ +
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 267 NTL 269
TL
Sbjct: 249 KTL 251
Score = 152 (58.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 44/167 (26%), Positives = 79/167 (47%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNY-HSQTTEKSVKVTDSPVRTAKFVAREHWIV 75
SD V +V F+ + + Y G V IW+ + Q + V + PV KF +I+
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYIL 272
Query: 76 CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-----FVLTASDDKLIKLWDW 130
+ D ++++D++ ++K++ HE+ + F ++++ S+D I +W+
Sbjct: 273 ASNLDSTLKLWDFSKGKTLKQYTGHEN--SKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASL--DGTIQIWNMD 175
+ E Q EGH+ V+ S +P N AS +L D I IW D
Sbjct: 331 QTR-EIVQCLEGHTQPVLASDCHPVQ-NIIASGALEPDNKIHIWRSD 375
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 72/275 (26%), Positives = 122/275 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ S F P ++ S TV IWN E+++ V + + +V SD
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASD 149
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK +++F+ T K + H +Y+ +P V++ S D+ +++WD K C +T
Sbjct: 150 DKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD-VKTGMCIKT 208
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
HS V +FN +D + AS S DG ++IW+ + TL E F +
Sbjct: 209 LPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL---RIIITASEDGTIL 256
K Y++ + D T+K+WD+ ++ GH N+ + + + + II+ SED I
Sbjct: 268 GK-YILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
IWN T + L + V + N +A G
Sbjct: 327 IWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Score = 248 (92.4 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 63/226 (27%), Positives = 112/226 (49%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ I+ + K++K ++ V F + +V GS D+ +R++D T +K A
Sbjct: 152 TLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPA 211
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTF-EGHSHYVMQSAFNPKDLN 158
H D + +++ + + + S D L+++WD N +C +T + + V F+P
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWD-TANGQCIKTLVDDENPPVAFVKFSPNGKY 270
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI--DYFITSDKVYLITGSDDFTVKVW 216
AS +LD T+++W+ HE CI ++ +T K ++I+GS+D + +W
Sbjct: 271 ILAS-NLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGK-WIISGSEDCKIYIW 328
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITAS--EDGTILIWNA 260
+ +T+ VQ LEGHT V A HP II + + D I IW +
Sbjct: 329 NLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRS 374
Score = 225 (84.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 52/175 (29%), Positives = 98/175 (56%)
Query: 133 NWECTQTFEGHSHYVMQSAFNP--KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
N++ T EGH+ + + F+P K L T +S D T++IWNMD + TL H+ G+
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGT---SSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS 250
N I + +SD +++ SDD T+K+++ T + L+GH N V F+P+ ++++ S
Sbjct: 133 NDIAW--SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGS 190
Query: 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305
D ++ IW+ T TL + + V ++ + + + +A G +G +V+I +++
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG--LVRIWDTA 243
Score = 218 (81.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 55/183 (30%), Positives = 95/183 (51%)
Query: 87 DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHY 146
+Y M ++ E H I S P ++ T+S DK +K+W+ + + C +T GH
Sbjct: 76 NYKLMCTL---EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD-HMICERTLTGHKLG 131
Query: 147 VMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLIT 206
V A++ D SAS D T++I+ + +S TL H + C ++ S V ++
Sbjct: 132 VNDIAWS-SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV--VS 188
Query: 207 GSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQ 266
GS D +V++WD +T C++ L H++ V+AV F+ + +I + S DG + IW+ +
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 267 NTL 269
TL
Sbjct: 249 KTL 251
Score = 152 (58.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 44/167 (26%), Positives = 79/167 (47%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNY-HSQTTEKSVKVTDSPVRTAKFVAREHWIV 75
SD V +V F+ + + Y G V IW+ + Q + V + PV KF +I+
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYIL 272
Query: 76 CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-----FVLTASDDKLIKLWDW 130
+ D ++++D++ ++K++ HE+ + F ++++ S+D I +W+
Sbjct: 273 ASNLDSTLKLWDFSKGKTLKQYTGHEN--SKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASL--DGTIQIWNMD 175
+ E Q EGH+ V+ S +P N AS +L D I IW D
Sbjct: 331 QTR-EIVQCLEGHTQPVLASDCHPVQ-NIIASGALEPDNKIHIWRSD 375
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 61/193 (31%), Positives = 98/193 (50%)
Query: 74 IVCGSDDKFIRVF-----DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
++ GS DK I ++ D N + + H ++ A+ + L+AS DK I+LW
Sbjct: 31 LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLW 90
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD--AH 186
D EK ECT F GH+ V+ + +P D S S D TI+IWN+ + K+T+ H
Sbjct: 91 DLEKG-ECTHQFVGHTSDVLSVSISP-DNRQVVSGSRDKTIKIWNIIGNC-KYTITDGGH 147
Query: 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRII 246
++C+ + D + ++ D VKVWD ET + GHT V+AV P+ +
Sbjct: 148 SDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLC 207
Query: 247 ITASEDGTILIWN 259
+ DGT+++W+
Sbjct: 208 ASGGRDGTLMLWD 220
Score = 195 (73.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 57/210 (27%), Positives = 101/210 (48%)
Query: 98 EAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEK---NWECTQT-FEGHSHYVMQSAF 152
E H ++ SL+ P P +L+ S DK I LW+ + N+ Q GHSH+V A
Sbjct: 12 EGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCAL 71
Query: 153 NPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
+ D + SAS D TI++W+++ H + + I+ D +++GS D T
Sbjct: 72 S-FDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVS--ISPDNRQVVSGSRDKT 128
Query: 213 VKVWDYETKTCVQILEG-HTNNVTAVCF--HPELRIIITASEDGTILIWNATTFRLQNTL 269
+K+W+ I +G H++ V+ V F +P+ ++A D + +W+ TF L+ +
Sbjct: 129 IKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSH 188
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
V ++ + A G +GTL++
Sbjct: 189 YGHTGYVSAVTISPDGSLCASGGRDGTLML 218
Score = 183 (69.5 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 68/257 (26%), Positives = 117/257 (45%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS-QTTEKSVKVTDSPVRTAKFVAREHWIV 75
SD S D H + L++ + T+ +W+ + T + V T S V + +V
Sbjct: 67 SDCALSFDSH----YALSASWDKTIRLWDLEKGECTHQFVGHT-SDVLSVSISPDNRQVV 121
Query: 76 CGSDDKFIRVFDY--NTMASVKEFEAHEDYIRSLAVHPTFPFVLT---ASDDKLIKLWDW 130
GS DK I++++ N ++ + H D++ + P P LT A DK +K+WD
Sbjct: 122 SGSRDKTIKIWNIIGNCKYTITD-GGHSDWVSCVRFSPN-PDNLTFVSAGWDKAVKVWDL 179
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
E + + GH+ YV +P D + AS DGT+ +W+++ S ++L+A + I
Sbjct: 180 E-TFSLRTSHYGHTGYVSAVTISP-DGSLCASGGRDGTLMLWDLNESTHLYSLEA-KANI 236
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS 250
N + + S Y + + +++++D ET+ V L V PE I +T S
Sbjct: 237 NAL---VFSPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPEC-ISLTWS 292
Query: 251 EDGTILI--WNATTFRL 265
DG L W R+
Sbjct: 293 PDGQTLFSGWTDNLIRV 309
Score = 177 (67.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 44/144 (30%), Positives = 72/144 (50%)
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM--DS---SAAKFTLDAHEKGINCI 193
T EGHS +V + P++ + S S D +I +WN+ D A+ L H ++
Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVS-- 67
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
D ++ D Y ++ S D T+++WD E C GHT++V +V P+ R +++ S D
Sbjct: 68 DCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDK 127
Query: 254 TILIWNATTFRLQNTLSSGLERVW 277
TI IWN + T++ G W
Sbjct: 128 TIKIWNIIG-NCKYTITDGGHSDW 150
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 264 (98.0 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 79/306 (25%), Positives = 147/306 (48%)
Query: 2 ETPLELQIEKEFIQKS-DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS 60
+T L+L++E + +++S D +K + P +VC++ + Q T K + D
Sbjct: 426 KTALDLKLEIQKVKESRDAIKLDNLQLALP---------SVCMYTF--QNTNKDMSCLDF 474
Query: 61 P----VRTAKFVAR--EHWIVCGSD----DKFIRVFDYNTMASVKEFEAHEDYIRSLAVH 110
+ A F + W + GS + + D + + K H + S +
Sbjct: 475 SDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFS 534
Query: 111 PTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQ 170
P ++L+ S+DK ++LW + + +++GH+H V +F+P + FA+AS D T +
Sbjct: 535 PDNKYLLSGSEDKTVRLWSMDTHTALV-SYKGHNHPVWDVSFSPLG-HYFATASHDQTAR 592
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W+ D H ++C+ + + Y+ TGS D T ++WD T V++ GH
Sbjct: 593 LWSCDHIYPLRIFAGHLNDVDCVSFH--PNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGH 650
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIWN-ATTFRLQNTLSSGLERVWSIGY-KKGSNQV 288
T V ++ P+ R + T SEDG I +W+ T RL+ G ++S+ Y K+G+ +
Sbjct: 651 TAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLI 710
Query: 289 AFGCDN 294
+ G D+
Sbjct: 711 SGGADH 716
Score = 213 (80.0 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 57/213 (26%), Positives = 97/213 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K + S V S F P ++L+ TV +W+ + T S K + PV F
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
H+ S D+ R++ + + ++ F H + + ++ HP +V T S DK ++WD
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG- 189
+ + F GH+ V+ A P D ++ S DG I +W++ + + H K
Sbjct: 639 STG-DSVRLFLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNA 696
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT 222
I + Y + + LI+G D TV+VWD + T
Sbjct: 697 IYSLSY--SKEGNVLISGGADHTVRVWDLKKAT 727
Score = 200 (75.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 50/205 (24%), Positives = 100/205 (48%)
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
V + F +++ GS+DK +R++ +T ++ ++ H + ++ P + TAS
Sbjct: 528 VYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASH 587
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF 181
D+ +LW + + + F GH + V +F+P F +S D T ++W++ + +
Sbjct: 588 DQTARLWSCDHIYPL-RIFAGHLNDVDCVSFHPNGCYVFTGSS-DKTCRMWDVSTGDSVR 645
Query: 182 TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNN-VTAVCFH 240
H + I + D +L TGS+D + VWD T ++ + GH N + ++ +
Sbjct: 646 LFLGHTAPV--ISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYS 703
Query: 241 PELRIIITASEDGTILIWN---ATT 262
E ++I+ D T+ +W+ ATT
Sbjct: 704 KEGNVLISGGADHTVRVWDLKKATT 728
Score = 135 (52.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 40/168 (23%), Positives = 71/168 (42%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V F P + + + T +W+ + + V F ++ GS
Sbjct: 570 VWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSS 629
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK R++D +T SV+ F H + S+AV P ++ T S+D +I +WD Q
Sbjct: 630 DKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQ- 688
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
GH + S K+ N S D T+++W++ + + + + E
Sbjct: 689 MRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDE 736
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 77/293 (26%), Positives = 123/293 (41%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+E+ F D V VDF + + + +W+ Q+ V F
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
H + GS DK +R++ N F AH +RS+ +TASDDK +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ + + H ++V + F+P D SAS D T+++W+ S + H
Sbjct: 131 ATHRQ-KFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGG 188
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
+ +D F S G D+ TVKVWD T +Q + H+ V + FHP +IT
Sbjct: 189 FVTYVD-FHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLIT 246
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLIVK 300
AS D T+ I + RL TL ++ + + G + G D ++ K
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 250 (93.1 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 61/248 (24%), Positives = 110/248 (44%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F D V V+F P+ + + TV IW + + + + VR+ F +
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
V SDDK ++V+ + + H +++R P +++ASDDK +KLWD +
Sbjct: 117 SFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KS 175
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ EC ++ H +V F+P A+A +D T+++W++ + H +N
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNG 234
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + + YLIT S D T+K+ D + L GH T V F + D
Sbjct: 235 LSFHPSGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Query: 253 GTILIWNA 260
+++W +
Sbjct: 293 EQVMVWKS 300
Score = 159 (61.0 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 140 FEGHSHYV--MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
F+GH V + + N K L AS S+D + +W+M + + H+ + C++ F
Sbjct: 15 FKGHRDAVTCVDFSINTKQL---ASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN-FS 70
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
S + L +GS D TV++W K + HT V +V F + + +TAS+D T+ +
Sbjct: 71 PSGHL-LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
W + +LS + V + + D+ T VK+ + S + V+
Sbjct: 130 WATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT--VKLWDKSSRECVH 181
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 259 (96.2 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 64/250 (25%), Positives = 114/250 (45%)
Query: 48 SQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSL 107
+ +T + VT +R+ K A I SDD R+ D T + +K H +
Sbjct: 250 ADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 309
Query: 108 AVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167
+ P ++L++S+D ++LW + + C ++GH++ V + F+P F S D
Sbjct: 310 SFSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 367
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
++W D H +NC + S+ Y+ TGS D TV++WD CV+I
Sbjct: 368 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 425
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ 287
GH + ++ F P R + T + DG +L+W+ + L + V S+ + +
Sbjct: 426 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 485
Query: 288 VAFGCDNGTL 297
+A G + T+
Sbjct: 486 LASGSMDNTV 495
Score = 206 (77.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S V F P + ++L+S GTV +W+ + T K + PV +F ++ V
Sbjct: 303 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 362
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
G D+ R++ + ++ F H + HP +V T S D+ ++LWD N C
Sbjct: 363 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD-VLNGNC 421
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ F GH + F+P A+ + DG + +W++ L H + C F
Sbjct: 422 VRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTV-CSLRF 479
Query: 197 ITSDKVYLITGSDDFTVKVWD 217
+ D L +GS D TV++WD
Sbjct: 480 -SRDGEILASGSMDNTVRLWD 499
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 47/200 (23%), Positives = 98/200 (49%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV A F ++++ S+D +R++ T + ++ H + P + ++
Sbjct: 305 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 364
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D++ +LW + +++ + F GH V + F+P N A+ S D T+++W++ +
Sbjct: 365 HDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 422
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H+ I+ + + + + +L TG+ D V +WD V L+GHT+ V ++ F
Sbjct: 423 RIFTGHKGPIHSLTF--SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 480
Query: 241 PELRIIITASEDGTILIWNA 260
+ I+ + S D T+ +W+A
Sbjct: 481 RDGEILASGSMDNTVRLWDA 500
Score = 171 (65.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 52/215 (24%), Positives = 95/215 (44%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
++V+ + +RS+ + SDD L ++ D EK + GHS V ++
Sbjct: 252 STVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGAS 310
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN--CIDYFITSDKVYLITGSD 209
F+P D N S+S DGT+++W++ + FT KG N D + Y ++G
Sbjct: 311 FSP-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 365
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
D ++W + ++I GH +V FHP + T S D T+ +W+
Sbjct: 366 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIF 425
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV-KIGN 303
+ + S+ + +A G +G +++ IG+
Sbjct: 426 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 460
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 255 (94.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 55/160 (34%), Positives = 89/160 (55%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + I S+ HP+F +++AS+D IK+WD+E E +T +GH++ V F+ K N
Sbjct: 105 HRNCINSVKFHPSFSLMVSASEDATIKVWDFESG-EFERTLKGHTNAVQDIDFD-KTGNL 162
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
AS S D TI++W+ + TL H+ ++C+ + + D+ LI+ S D T+KVW+
Sbjct: 163 LASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQ--LISSSRDKTIKVWEAA 220
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
T C++ L GH + V + + I + S D TI WN
Sbjct: 221 TGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Score = 254 (94.5 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 72/264 (27%), Positives = 123/264 (46%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSG-TVCIWNYHSQTTEKSVKVTDSPVRTAK 66
+ E+ ++ V+ +DF T +LAS + T+ +W++ + K++ D V +
Sbjct: 139 EFERTLKGHTNAVQDIDFDKTGN-LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVR 197
Query: 67 FVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIK 126
F ++ S DK I+V++ T +K HED++R + V + + S+D+ IK
Sbjct: 198 FTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIK 257
Query: 127 LWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAH 186
W+ K EC T+ HSH V AF+ ++ + G++ S K
Sbjct: 258 TWNIVKG-ECLATYREHSHVVECLAFSTANI-----IDIPGSLLSTPEGKSKVK-----Q 306
Query: 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRII 246
G N + YL TGS D T+K+W+ T C+ GH N V AV FHP + +
Sbjct: 307 GPGGNLV-----GQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFL 361
Query: 247 ITASEDGTILIWNATTFRLQNTLS 270
++ +D TI +W+ R T++
Sbjct: 362 LSVGDDKTIRVWDIAQGRCIKTIN 385
Score = 216 (81.1 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 52/157 (33%), Positives = 80/157 (50%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH + + F+P + SAS D TI++W+ +S + TL H + ID+ T +
Sbjct: 104 GHRNCINSVKFHPS-FSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN- 161
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
L + S D T+K+WD++T CV+ L GH +NV+ V F P +I++S D TI +W A
Sbjct: 162 -LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298
T TL + V I + + +A C N I
Sbjct: 221 TGYCIKTLVGHEDWVRKITVSEDGSCIA-SCSNDQTI 256
Score = 212 (79.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 65/245 (26%), Positives = 116/245 (47%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ SV FHP+ ++++ T+ +W++ S E+++K + V+ F + + S
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSA 168
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ T VK H+ + + P+ ++++S DK IK+W+ + C +T
Sbjct: 169 DLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGY-CIKT 227
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH +V + + +D + AS S D TI+ WN+ T H + C+ F T+
Sbjct: 228 LVGHEDWVRKITVS-EDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLA-FSTA 285
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+ + I GS T E K+ V+ +G N+ C + + T S D TI IW
Sbjct: 286 N-IIDIPGSLLSTP-----EGKSKVK--QGPGGNLVGQCGY-----LATGSRDKTIKIWE 332
Query: 260 ATTFR 264
T R
Sbjct: 333 LATGR 337
Score = 152 (58.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 50 TTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAV 109
T E KV P V + ++ GS DK I++++ T + + H++++R++
Sbjct: 297 TPEGKSKVKQGP--GGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRF 354
Query: 110 HPTFPFVLTASDDKLIKLWDWEKNWECTQTF-EGHSHYVMQSAF---NPKDLNTFASASL 165
HP F+L+ DDK I++WD + C +T E H+H++ F NP A+ +
Sbjct: 355 HPCGKFLLSVGDDKTIRVWDIAQG-RCIKTINEAHTHFISCLDFCLHNPH----IATGGV 409
Query: 166 DGTIQIWNM 174
D I++W +
Sbjct: 410 DDVIKVWKL 418
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
K L H IN + + + +++ S+D T+KVWD+E+ + L+GHTN V + F
Sbjct: 99 KHILTGHRNCINSVKFHPSFS--LMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDF 156
Query: 240 HPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
++ + S D TI +W+ T+ TL V + + +Q+ + T+ V
Sbjct: 157 DKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKV 216
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 161 ASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET 220
A+ S D TI+IW + + T H+ + + F K +L++ DD T++VWD
Sbjct: 320 ATGSRDKTIKIWELATGRCLATYIGHDNWVRAVR-FHPCGK-FLLSVGDDKTIRVWDIAQ 377
Query: 221 KTCVQIL-EGHTNNVTAV--CFH-PELRIIITASEDGTILIW 258
C++ + E HT+ ++ + C H P I T D I +W
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPH---IATGGVDDVIKVW 416
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 264 (98.0 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 69/270 (25%), Positives = 116/270 (42%)
Query: 11 KEFIQKSDRVKSVDF-HPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
+EF+ S V + T +L V +W+ T+ S+ SPV + F +
Sbjct: 9 QEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNS 68
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
E ++ G+ I+++D V+ F H ++ HP F+ + S D +++WD
Sbjct: 69 EEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 128
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
K C QT++GH+ + F+P D S LD +++W++ + HE
Sbjct: 129 TRKKG-CIQTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGP 186
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
I +D+ + L TGS D TVK WD ET + V A+ FHP+ + +
Sbjct: 187 IRSLDFHPL--EFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCG 244
Query: 250 SEDGT-ILIWNATTFRLQNTLSSGLERVWS 278
+DG + W R G++ WS
Sbjct: 245 LDDGLKVYSWEPVICR------DGVDMGWS 268
Score = 224 (83.9 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 47/173 (27%), Positives = 86/173 (49%)
Query: 94 VKEFEAHEDYIRSLAV-HPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAF 152
++EF AH + L++ T +LT DD + LW K + GH+ V AF
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTS-PMSLCGHTSPVDSVAF 66
Query: 153 NPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
N +++ A AS G I++W+++ S H + +++ + +L +GS D
Sbjct: 67 NSEEVLVLAGAS-SGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE--FLASGSSDTN 123
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL 265
++VWD K C+Q +GHT ++ + F P+ R +++ D + +W+ T +L
Sbjct: 124 LRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKL 176
Score = 217 (81.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 56/222 (25%), Positives = 97/222 (43%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
++ G DD + ++ S H + S+A + VL + +IKLWD E++
Sbjct: 31 LLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEES 90
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ + F GH F+P AS S D +++W+ T H +GI+ I
Sbjct: 91 -KMVRAFTGHRSNCSAVEFHPFG-EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTI 148
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
++ + D ++++G D VKVWD + + H + ++ FHP ++ T S D
Sbjct: 149 EF--SPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADR 206
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNG 295
T+ W+ TF L T V +I + + G D+G
Sbjct: 207 TVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDG 248
Score = 165 (63.1 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 47/171 (27%), Positives = 79/171 (46%)
Query: 6 ELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGT-VCIWNYHSQTTEKSVKVTDSPVRT 64
E ++ + F +V+FHP + LAS S T + +W+ + ++ K + T
Sbjct: 89 ESKMVRAFTGHRSNCSAVEFHPFGEF-LASGSSDTNLRVWDTRKKGCIQTYKGHTRGIST 147
Query: 65 AKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
+F W+V G D ++V+D + EF+ HE IRSL HP + T S D+
Sbjct: 148 IEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRT 207
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+K WD E +E T + V AF+P F LD +++++ +
Sbjct: 208 VKFWDLE-TFELIGTTRPEATGVRAIAFHPDGQTLFCG--LDDGLKVYSWE 255
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 29/123 (23%), Positives = 54/123 (43%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH +NC+ + ++ L+TG DD+ V +W T L GHT+ V +V F+ E
Sbjct: 13 AHSGNVNCLSIGKKTSRL-LLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEV 71
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
+++ + G I +W+ ++ + ++ + +A G + L V
Sbjct: 72 LVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK 131
Query: 305 SGC 307
GC
Sbjct: 132 KGC 134
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 261 (96.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 70/247 (28%), Positives = 114/247 (46%)
Query: 52 EKSVKV---TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLA 108
+ SV++ T + +RT K + S D +R+ D + + H + A
Sbjct: 398 DSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCA 457
Query: 109 VHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGT 168
P +L+ S+D I+LW W C T+ GH + V F P F S S D T
Sbjct: 458 FAPEMNLLLSCSEDSTIRLWSL-LTWSCVVTYRGHVYPVWDVRFAPHGYY-FVSCSYDKT 515
Query: 169 IQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE 228
++W DS+ A H ++C+ + S+ Y+ TGS D TV++WD T V+++
Sbjct: 516 ARLWATDSNQALRVFVGHLSDVDCVQFHPNSN--YVATGSSDRTVRLWDNMTGQSVRLMT 573
Query: 229 GHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQ 287
GH +V+++ F R + + S D I+IW+ + L TL V +I + + G+
Sbjct: 574 GHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVL 633
Query: 288 VAFGCDN 294
A G DN
Sbjct: 634 AAAGLDN 640
Score = 189 (71.6 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 49/200 (24%), Positives = 91/200 (45%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV F + ++ S+D IR++ T + V + H + + P + ++ S
Sbjct: 452 PVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCS 511
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW-NMDSSAA 179
DK +LW + N + + F GH V F+P N A+ S D T+++W NM +
Sbjct: 512 YDKTARLWATDSN-QALRVFVGHLSDVDCVQFHPNS-NYVATGSSDRTVRLWDNMTGQSV 569
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
+ + H+ ++ + + YL +GS D + +WD + V L HT+ VT + F
Sbjct: 570 RL-MTGHKGSVSSLAFSACGR--YLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITF 626
Query: 240 HPELRIIITASEDGTILIWN 259
+ ++ A D + +W+
Sbjct: 627 SRDGTVLAAAGLDNNLTLWD 646
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 56/233 (24%), Positives = 107/233 (45%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ CG D +R++ T A ++ + D +R L S D +++ D +++
Sbjct: 392 LACGFGDSSVRIWSL-TPAKLRTLK-DADSLRELDKE---------SADINVRMLD-DRS 439
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
E T++ GH+ V + AF P ++N S S D TI++W++ + + T H +
Sbjct: 440 GEVTRSLMGHTGPVYRCAFAP-EMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPV--W 496
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
D Y ++ S D T ++W ++ +++ GH ++V V FHP + T S D
Sbjct: 497 DVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDR 556
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC-DNGTLIVKIGNSS 305
T+ +W+ T + ++ V S+ + +A G D+ +I + N S
Sbjct: 557 TVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGS 609
Score = 166 (63.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 49/218 (22%), Positives = 93/218 (42%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIR 84
F P +L+ T+ +W+ + + + + PV +F ++ V S DK R
Sbjct: 458 FAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTAR 517
Query: 85 VFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHS 144
++ ++ +++ F H + + HP +V T S D+ ++LWD + + GH
Sbjct: 518 LWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWD-NMTGQSVRLMTGHK 576
Query: 145 HYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYL 204
V AF+ AS S+D I IW++ + + TL H + I + + D L
Sbjct: 577 GSVSSLAFSACG-RYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITF--SRDGTVL 633
Query: 205 ITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
D + +WD+ ++ E + +N V H +
Sbjct: 634 AAAGLDNNLTLWDFH-----KVTEDYISNHITVSHHQD 666
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 39/154 (25%), Positives = 66/154 (42%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V F P + ++ Y T +W S + S V +F +++ GS
Sbjct: 495 VWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSS 554
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ +R++D T SV+ H+ + SLA ++ + S D I +WD N T
Sbjct: 555 DRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLS-NGSLVTT 613
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
H+ V F+ +D A+A LD + +W+
Sbjct: 614 LLRHTSTVTTITFS-RDGTVLAAAGLDNNLTLWD 646
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 257 (95.5 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 66/266 (24%), Positives = 114/266 (42%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F+ +D + V+F P+ V +S TV +W + K + VR+ F
Sbjct: 56 FVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQ 115
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+V SDDK ++V+ + H +++R P + + DD+ ++LWD
Sbjct: 116 RLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSS 175
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ +C F + FN AS+ D TI+IW++ ++ H G+NC
Sbjct: 176 H-QCINIFTDYGGSATFVDFNSSG-TCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNC 233
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + YLI+GS D T+K+ D + L GH V V F + + + D
Sbjct: 234 FSFHPSGN--YLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGAD 291
Query: 253 GTILIW--NATTFRLQNTLSSGLERV 276
+L+W N + + LS +RV
Sbjct: 292 SQVLMWKTNFDSLNYRELLSKHSKRV 317
Score = 241 (89.9 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 79/313 (25%), Positives = 136/313 (43%)
Query: 1 METPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTD 59
ME P +E+ F D + DF+P + ++ IWN + + V TD
Sbjct: 5 MEDPT---LERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTD 61
Query: 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
+ F + S D+ +R++ + F+AH +RS+ ++TA
Sbjct: 62 V-ITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTA 120
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
SDDK +K+W E+ + + H+++V + F+P D AS D T+++W+ S
Sbjct: 121 SDDKSVKVWGVERK-KFLYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDTSSHQC 178
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
+ +D F +S +G+D+ T+K+WD T +Q + H V F
Sbjct: 179 INIFTDYGGSATFVD-FNSSGTCIASSGADN-TIKIWDIRTNKLIQHYKVHNAGVNCFSF 236
Query: 240 HPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG-CDNGTLI 298
HP +I+ S D TI I + RL TL V ++ + + + A G D+ L+
Sbjct: 237 HPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLM 296
Query: 299 VKIGNSSGCDSVN 311
K + DS+N
Sbjct: 297 WK----TNFDSLN 305
Score = 134 (52.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 49/219 (22%), Positives = 98/219 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV-CGS 78
V+SV F ++ + +V +W + S+ + VR A+F I CG
Sbjct: 105 VRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCG- 163
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
DD+ +R++D ++ + F + + + + + ++ D IK+WD N + Q
Sbjct: 164 DDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTN-KLIQ 222
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
++ H+ V +F+P N S S D TI+I ++ +TL H+ + + + +
Sbjct: 223 HYKVHNAGVNCFSFHPSG-NYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTF--S 279
Query: 199 SDKVYLITGSDDFTVKVW--DYETKTCVQILEGHTNNVT 235
D +G D V +W ++++ ++L H+ VT
Sbjct: 280 RDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKRVT 318
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 260 (96.6 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 68/222 (30%), Positives = 110/222 (49%)
Query: 21 KSVDFHPTQ--PWVLASLYSGTVCI---WNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV 75
K DF T+ PW +Y + W Y + + K+ K + V +F ++ +
Sbjct: 309 KDSDFFKTRYRPW--KEVYKDRFKVGTNWKY-GRCSIKTFKGHTNGVMCLQF--EDNILA 363
Query: 76 CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
GS D I+++D T ++ HE IR L T +++ S D+ IK+W+W + E
Sbjct: 364 TGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTK--LISGSMDRTIKVWNW-RTGE 420
Query: 136 CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY 195
C T+ GH V+ F D + AS S+D T++IWN + + F+L H +N +
Sbjct: 421 CISTYTGHRGGVIGLHF---DASILASGSVDKTVKIWNFEDKST-FSLRGHTDWVNAVRV 476
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
+S V+ + SDD TV++WD +TKTC++ GH V V
Sbjct: 477 DTSSRTVF--SASDDCTVRLWDLDTKTCIRTFHGHVGQVQQV 516
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 52/141 (36%), Positives = 78/141 (55%)
Query: 133 NWE---CT-QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
NW+ C+ +TF+GH++ VM F +D N A+ S D TI+IW+ ++ TL HE
Sbjct: 334 NWKYGRCSIKTFKGHTNGVMCLQF--ED-NILATGSYDTTIKIWDTETGEELRTLRGHES 390
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
GI C+ + D LI+GS D T+KVW++ T C+ GH V + H + I+ +
Sbjct: 391 GIRCLQF----DDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGL--HFDASILAS 444
Query: 249 ASEDGTILIWN---ATTFRLQ 266
S D T+ IWN +TF L+
Sbjct: 445 GSVDKTVKIWNFEDKSTFSLR 465
Score = 204 (76.9 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 54/170 (31%), Positives = 82/170 (48%)
Query: 93 SVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAF 152
S+K F+ H + + L + T S D IK+WD E E +T GH + F
Sbjct: 341 SIKTFKGHTNGVMCLQFEDNI--LATGSYDTTIKIWDTETGEEL-RTLRGHESGIRCLQF 397
Query: 153 NPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
+ L S S+D TI++WN + T H G+ + + D L +GS D T
Sbjct: 398 DDTKL---ISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF----DASILASGSVDKT 450
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
VK+W++E K+ L GHT+ V AV R + +AS+D T+ +W+ T
Sbjct: 451 VKIWNFEDKSTFS-LRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDT 499
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 68/290 (23%), Positives = 130/290 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
++ + F T+ +++ T+ +WN+ + + V F A + GS
Sbjct: 392 IRCLQFDDTK--LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASI--LASGSV 447
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK ++++++ ++ H D++ ++ V + V +ASDD ++LWD + C +T
Sbjct: 448 DKTVKIWNFEDKSTFS-LRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTK-TCIRT 505
Query: 140 FEGHSHYVMQSAFNPK--------------DLNTFASASLDGTIQI-WNMDSSAAKFTLD 184
F GH V Q P+ DL+T + + +IQ ++ +AA
Sbjct: 506 FHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSS 565
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
A G + D + Y++T + D T+++W+ T C++ GH V A+ LR
Sbjct: 566 AF--GTS-FDNGRAAPPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADT-LR 621
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
I+ + +ED I IW+ T + + T + V IG G ++ A G ++
Sbjct: 622 IV-SGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGL--GDSRFATGSED 668
Score = 164 (62.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 58/242 (23%), Positives = 107/242 (44%)
Query: 32 VLAS-LYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90
+LAS TV IWN+ ++T TD V + + SDD +R++D +T
Sbjct: 441 ILASGSVDKTVKIWNFEDKSTFSLRGHTDW-VNAVRVDTSSRTVFSASDDCTVRLWDLDT 499
Query: 91 MASVKEFEAHEDYIRSLAVHPT-FPF----VLTASDDKLIKLWDWEK-NWECTQTFEGHS 144
++ F H ++ + P F F +DD D + + + + E ++
Sbjct: 500 KTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNA 559
Query: 145 HYVMQSAFNPKDLNTFAS-------ASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
Y SAF N A+ ++LD TI++W + T H +G+ + +
Sbjct: 560 AYSQSSAFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGV----WAL 615
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
+D + +++G++D +K+WD T C + GH+ VT + + R T SED + +
Sbjct: 616 GADTLRIVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGLG-DSRFA-TGSEDCEVRM 673
Query: 258 WN 259
++
Sbjct: 674 YS 675
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 261 (96.9 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 80/272 (29%), Positives = 127/272 (46%)
Query: 51 TEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVH 110
T K + + V ++ +H VC S+ +FI V + E H D + +L
Sbjct: 315 TIKKLNGSFDEVIDCAWIGDDHLAVC-SNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSS 373
Query: 111 PTFPFVLTASDDKLIKLWDW--EKN-WECTQTFEGHSHYVMQSAFNPKDLN---TF-ASA 163
++ T + D ++LW+ E N ++C F GH+ V A P D+N TF AS+
Sbjct: 374 EDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASS 433
Query: 164 SLDGTIQIWNMDSSAAK--------FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
S D T++ +N+ S K +T+ AH++ +N I ++ D + + S D T+K+
Sbjct: 434 SQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQ--VSKDGRIIASASQDKTIKL 491
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLER 275
WD T V +L GH V A F+P R + + S D TI IWN T + TL
Sbjct: 492 WDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGA 551
Query: 276 VWSIGYKKGSNQVAFGCDNGTLIVKIGN-SSG 306
+ + Y QV +G +VK+ + SSG
Sbjct: 552 ILKLIYISQGTQVVSAAADG--LVKVWSLSSG 581
Score = 225 (84.3 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 61/238 (25%), Positives = 118/238 (49%)
Query: 73 WIVCGSDDKFIRVFDYNTMASVKE----FEAHEDYIRSLAVHPT----FP-FVLTASDDK 123
W+ G+ D +R+++ N +V + F H + ++A+ P +P F+ ++S D+
Sbjct: 378 WLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDR 437
Query: 124 LIKLWDWEKNWECTQ-------TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS 176
+K ++ + T + H V + KD ASAS D TI++W+ +
Sbjct: 438 TLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVS-KDGRIIASASQDKTIKLWDSST 496
Query: 177 SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTA 236
L H +G+ + S + L +GS D T+++W+ +T+ CVQ LEGHT +
Sbjct: 497 GEVVGVLRGHRRGVWACSFNPFSRQ--LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILK 554
Query: 237 VCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK-KGSNQVAFGCD 293
+ + + +++A+ DG + +W+ ++ TL + +RVW++ + GS V+ G D
Sbjct: 555 LIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGAD 612
Score = 220 (82.5 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 68/276 (24%), Positives = 115/276 (41%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQ-TTEKSVKVTDSPVRTAKFVAR----- 70
+D V ++D W+ TV +WN + + K + V + VA
Sbjct: 364 TDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDV 423
Query: 71 ---EHWIVCGSDDKFIRVFDYNTMASVKEF--------EAHEDYIRSLAVHPTFPFVLTA 119
++ S D+ ++ F+ + + +F +AH+ + ++ V + +A
Sbjct: 424 NGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASA 483
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IKLWD E GH V +FNP AS S D TI+IWN+D+
Sbjct: 484 SQDKTIKLWD-SSTGEVVGVLRGHRRGVWACSFNPFS-RQLASGSGDRTIRIWNVDTQQC 541
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
TL+ H I + Y S +++ + D VKVW + CV L+ H + V A+
Sbjct: 542 VQTLEGHTGAILKLIYI--SQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALAS 599
Query: 240 HPELRIIITASEDGTILIWNATTFRLQNTLSSGLER 275
+ ++++ D + +W T + LER
Sbjct: 600 RFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEELER 635
Score = 181 (68.8 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 56/261 (21%), Positives = 117/261 (44%)
Query: 52 EKSVK--VTDSPVRTAKFVAREHWIVCGSDDKFI--RVFDYNTMASVKEFEAHEDYIRSL 107
EKS++ T PV F + E +V D+ I R + S+K+ E +DY+ +L
Sbjct: 13 EKSIEPIYTGGPVA---FDSNEKILVTALTDRIIGTRSETGERLFSIKKDE--DDYVTAL 67
Query: 108 AVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167
A+ ++ A +L+ +++ ++ + H V+ +P + A+ +G
Sbjct: 68 AITSDSKKLIAAFRSRLLTIYEIPSGRRI-KSMKAHETPVITMTIDPTN-TLLATGGAEG 125
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
+++W++ + + H I+ + + + L +G+DD V++WD + + +
Sbjct: 126 LVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVF 185
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGS-- 285
EGH++ + + F P +++ S D T+ +WN T+ V +IG+ G
Sbjct: 186 EGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPV-FHSVEAIGWVNGQPE 244
Query: 286 NQVAFGCDNGTLIVKIGNSSG 306
++ + G LI+ SG
Sbjct: 245 EKILYTAGEGNLILAWDWKSG 265
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 44/192 (22%), Positives = 80/192 (41%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++A+ S + I+ S KS+K ++PV T + G + ++V+D
Sbjct: 76 LIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGA 135
Query: 92 ASVKEFEAHEDYIRSLAV--HPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQ 149
F H I +L H + + +DD ++LWD + FEGHS +
Sbjct: 136 YVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSS-RSMAVFEGHSSVIRG 194
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS-DKVYLITGS 208
F P + S S D T+Q+WN+ +A T+ + I + ++ L T
Sbjct: 195 LTFEPTG-SFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQPEEKILYTAG 252
Query: 209 DDFTVKVWDYET 220
+ + WD+++
Sbjct: 253 EGNLILAWDWKS 264
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 64/301 (21%), Positives = 128/301 (42%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV---AREHW 73
S ++ + F PT ++L+ TV +WN ++ +++ V S V +V E
Sbjct: 189 SSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQPEEKI 247
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF----VLTASDDK--LIKL 127
+ + I +D+ + S + + + A+ PF +L+ D L++
Sbjct: 248 LYTAGEGNLILAWDWKS-GSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLLRK 306
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
+ + + G V+ A+ D A S I + + D + L+ H
Sbjct: 307 RVPGEGFITIKKLNGSFDEVIDCAWIGDD--HLAVCSNTEFIDVISTDGTQVFGVLEGHT 364
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT----CVQILEGHTNNVTAVCFHP-E 242
+ +D + D V+L TG+ D TV++W+ + C+ + GHT +VTAV P +
Sbjct: 365 DIVLTLDS--SEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLD 422
Query: 243 LR----IIITASEDGTILIWNATTFRLQNTLSSGLERVWSI-GYKKGSNQVAFGCDNGTL 297
+ + ++S+D T+ +N + ++ S+ VW+I + + N + D G +
Sbjct: 423 VNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSN--RAVWTIKAHDRDVNAIQVSKD-GRI 479
Query: 298 I 298
I
Sbjct: 480 I 480
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 262 (97.3 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 80/304 (26%), Positives = 134/304 (44%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F +VK V FHP + SG +++ T + + + +PV T
Sbjct: 256 FYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGE 315
Query: 73 WIVCGSDDKF-IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
W+ GS + V+++ + + + + + H D SLA P V+TAS+D IK+WD
Sbjct: 316 WLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDIT 375
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK-GI 190
+ C TFE H+ V F + F+S SLDGT++ W++ T E+
Sbjct: 376 SGF-CLATFEEHTSSVTAVQFAKRGQVMFSS-SLDGTVRAWDLIRYRNFRTFTGTERIQF 433
Query: 191 NCIDYFITSDKVYLITGS-DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
NC+ + + V GS D+F + VW +T + L GH V+ + F E ++ +A
Sbjct: 434 NCLAVDPSGEVV--CAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASA 491
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL-IVKIGNSSGCD 308
S D TI IW+ Q V ++ + +VA G + I I ++
Sbjct: 492 SWDKTIRIWSIFGRSQQVEPIEVYSDVLALSMRPDGKEVAVSTLKGQISIFNIEDAKQVG 551
Query: 309 SVNC 312
+++C
Sbjct: 552 NIDC 555
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 49/201 (24%), Positives = 88/201 (43%)
Query: 79 DDKF--IRVFDYNTMASVKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
DDK + + Y+ + K F A++ ++ + HP + +L+D
Sbjct: 235 DDKQEEVDISKYSWRITKKHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTL 294
Query: 136 CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY 195
Q G + S + F S+ L G + ++ S + H N + Y
Sbjct: 295 IQQLSMGQNPVNTVSVNQTGEWLAFGSSKL-GQLLVYEWQSESYILKQQGHFDSTNSLAY 353
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTI 255
+ D ++T S+D +KVWD + C+ E HT++VTAV F +++ ++S DGT+
Sbjct: 354 --SPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTV 411
Query: 256 LIWNATTFRLQNTLSSGLERV 276
W+ +R T + G ER+
Sbjct: 412 RAWDLIRYRNFRTFT-GTERI 431
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 61/248 (24%), Positives = 110/248 (44%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F D V V+F P+ + + TV IW + + + + VR+ F +
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 78
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
V SDDK ++V+ + + H +++R P +++ASDDK +KLWD +
Sbjct: 79 SFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KS 137
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ EC ++ H +V F+P A+A +D T+++W++ + H +N
Sbjct: 138 SRECVHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNG 196
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + + YLIT S D T+K+ D + L GH T V F + D
Sbjct: 197 LSFHPSGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 254
Query: 253 GTILIWNA 260
+++W +
Sbjct: 255 EQVMVWKS 262
Score = 241 (89.9 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 71/262 (27%), Positives = 115/262 (43%)
Query: 42 CIWNYHSQTTEKSVKVTD--SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
C+ +H + ++ + T V F H + GS DK +R++ N F A
Sbjct: 4 CLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA 63
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +RS+ +TASDDK +K+W + + + H ++V + F+P D
Sbjct: 64 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQ-KFLFSLSQHINWVRCAKFSP-DGRL 121
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
SAS D T+++W+ S + H + +D F S G D+ TVKVWD
Sbjct: 122 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVD-FHPSGTCIAAAGMDN-TVKVWDVR 179
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
T +Q + H+ V + FHP +ITAS D T+ I + RL TL ++
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 239
Query: 280 GYKK-GSNQVAFGCDNGTLIVK 300
+ + G + G D ++ K
Sbjct: 240 AFSRTGEYFASGGSDEQVMVWK 261
Score = 221 (82.9 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 57/218 (26%), Positives = 92/218 (42%)
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D + V+ + F H+D + + P+ + + S DK +++W E T
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-V 60
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F H+ V F D +F +AS D T+++W F+L H + C + +
Sbjct: 61 FRAHTATVRSVHFC-SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKF--SP 117
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D +++ SDD TVK+WD ++ CV H VT V FHP I A D T+ +W+
Sbjct: 118 DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 177
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
T RL V + + N + + TL
Sbjct: 178 VRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTL 215
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/147 (23%), Positives = 67/147 (45%)
Query: 165 LDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV 224
+D + +W+M + + H+ + C++ F S + L +GS D TV++W K
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGHKDAVTCVN-FSPSGHL-LASGSRDKTVRIWVPNVKGES 58
Query: 225 QILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
+ HT V +V F + + +TAS+D T+ +W + +LS + V +
Sbjct: 59 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 118
Query: 285 SNQVAFGCDNGTLIVKIGNSSGCDSVN 311
+ D+ T VK+ + S + V+
Sbjct: 119 GRLIVSASDDKT--VKLWDKSSRECVH 143
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 260 (96.6 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 64/250 (25%), Positives = 114/250 (45%)
Query: 48 SQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSL 107
+ +T + VT +R+ K + I SDD R+ D T + +K H +
Sbjct: 491 ADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 550
Query: 108 AVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167
+ P ++L++S+D ++LW + + C ++GH++ V + F+P F S D
Sbjct: 551 SFSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 608
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
++W D H +NC Y S+ Y+ TGS D TV++WD CV+I
Sbjct: 609 VARLWATDHYQPLRIFAGHLADVNCTRYHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 666
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ 287
GH + ++ F P R + T + DG +L+W+ + L + V S+ + +
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 726
Query: 288 VAFGCDNGTL 297
+A G + T+
Sbjct: 727 LASGSMDNTV 736
Score = 206 (77.6 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S V F P + ++L+S GTV +W+ + T K + PV +F ++ V
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 603
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
G D+ R++ + ++ F H + HP +V T S D+ ++LWD N C
Sbjct: 604 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWD-VLNGNC 662
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ F GH + F+P A+ + DG + +W++ L H + C F
Sbjct: 663 VRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTV-CSLRF 720
Query: 197 ITSDKVYLITGSDDFTVKVWD 217
+ D L +GS D TV++WD
Sbjct: 721 -SRDGEILASGSMDNTVRLWD 740
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 46/200 (23%), Positives = 98/200 (49%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV A F ++++ S+D +R++ T + ++ H + P + ++
Sbjct: 546 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 605
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D++ +LW + +++ + F GH V + ++P N A+ S D T+++W++ +
Sbjct: 606 HDRVARLWATD-HYQPLRIFAGHLADVNCTRYHPNS-NYVATGSADRTVRLWDVLNGNCV 663
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H+ I+ + + + + +L TG+ D V +WD V L+GHT+ V ++ F
Sbjct: 664 RIFTGHKGPIHSLTF--SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 721
Query: 241 PELRIIITASEDGTILIWNA 260
+ I+ + S D T+ +W+A
Sbjct: 722 RDGEILASGSMDNTVRLWDA 741
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/215 (23%), Positives = 95/215 (44%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
++V+ + +RS+ + SDD L ++ D EK + GHS V ++
Sbjct: 493 STVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGAS 551
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN--CIDYFITSDKVYLITGSD 209
F+P D N S+S DGT+++W++ + FT KG N D + Y ++G
Sbjct: 552 FSP-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 606
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
D ++W + ++I GH +V +HP + T S D T+ +W+
Sbjct: 607 DRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIF 666
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV-KIGN 303
+ + S+ + +A G +G +++ IG+
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 701
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 258 (95.9 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 78/268 (29%), Positives = 130/268 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ +WN + ++ S VR E +V GS D +RV+D T +
Sbjct: 364 TLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMG 421
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +R V V++ + D ++K+WD E C T +GH++ V F+ +
Sbjct: 422 HVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQFDGIHV-- 476
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
S SLD +I++W++++ TL H+ + ++ D + L++G+ D TVK+WD +
Sbjct: 477 -VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNI-LVSGNADSTVKIWDIK 531
Query: 220 TKTCVQILEGHTNNVTAV-CFHPELRIIITASEDGTILIWNATTFR-LQN--TLSSGLER 275
T C+Q L+G + + +AV C +IT+S+DGT+ +W+ T ++N TL SG
Sbjct: 532 TGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 591
Query: 276 --VWSIGYKKGSNQVAFGCDNGTLIVKI 301
VW I A G NGT K+
Sbjct: 592 GVVWRIRASNTKLVCAVGSRNGTEETKL 619
Score = 254 (94.5 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 77/274 (28%), Positives = 130/274 (47%)
Query: 30 PWVLASLYSGTVCI-WNYHSQTTEKSVKVTDSPVRTA-KFVAREHWIVCGSDDKFIRVFD 87
PW A + + W + K +K D V T +F IV GSDD ++V+
Sbjct: 272 PWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWS 329
Query: 88 YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
T ++ H + S + +++ S D+ +K+W+ E EC T GH+ V
Sbjct: 330 AVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG-ECIHTLYGHTSTV 386
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
+ K + S S D T+++W++++ L H + C+ Y D +++G
Sbjct: 387 RCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSG 439
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
+ DF VKVWD ET+TC+ L+GHTN V ++ F + ++ + S D +I +W+ T +
Sbjct: 440 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG-IHVV-SGSLDTSIRVWDVETGNCIH 497
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
TL+ G + + S G + N + G N VKI
Sbjct: 498 TLT-GHQSLTS-GMELKDNILVSG--NADSTVKI 527
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 257 (95.5 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 78/268 (29%), Positives = 129/268 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ +WN + ++ S VR E +V GS D +RV+D T +
Sbjct: 322 TLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMG 379
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +R V V++ + D ++K+WD E C T +GH++ V F+ +
Sbjct: 380 HVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQFDGIHV-- 434
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
S SLD +I++W++++ TL H+ + ++ D + L++G+ D TVK+WD +
Sbjct: 435 -VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNI-LVSGNADSTVKIWDIK 489
Query: 220 TKTCVQILEGHTNNVTAV-CFHPELRIIITASEDGTILIWNATTFR-LQN--TLSSGLER 275
T C+Q L+G + +AV C +IT+S+DGT+ +W+ T ++N TL SG
Sbjct: 490 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 549
Query: 276 --VWSIGYKKGSNQVAFGCDNGTLIVKI 301
VW I A G NGT K+
Sbjct: 550 GVVWRIRASNTKLVCAVGSRNGTEETKL 577
Score = 254 (94.5 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 77/274 (28%), Positives = 130/274 (47%)
Query: 30 PWVLASLYSGTVCI-WNYHSQTTEKSVKVTDSPVRTA-KFVAREHWIVCGSDDKFIRVFD 87
PW A + + W + K +K D V T +F IV GSDD ++V+
Sbjct: 230 PWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWS 287
Query: 88 YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
T ++ H + S + +++ S D+ +K+W+ E EC T GH+ V
Sbjct: 288 AVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG-ECIHTLYGHTSTV 344
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
+ K + S S D T+++W++++ L H + C+ Y D +++G
Sbjct: 345 RCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSG 397
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
+ DF VKVWD ET+TC+ L+GHTN V ++ F + ++ + S D +I +W+ T +
Sbjct: 398 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG-IHVV-SGSLDTSIRVWDVETGNCIH 455
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
TL+ G + + S G + N + G N VKI
Sbjct: 456 TLT-GHQSLTS-GMELKDNILVSG--NADSTVKI 485
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 259 (96.2 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 64/250 (25%), Positives = 114/250 (45%)
Query: 48 SQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSL 107
+ +T + VT +R+ K A I SDD R+ D T + +K H +
Sbjct: 490 ADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 549
Query: 108 AVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167
+ P ++L++S+D ++LW + + C ++GH++ V + F+P F S D
Sbjct: 550 SFSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 607
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
++W D H +NC + S+ Y+ TGS D TV++WD CV+I
Sbjct: 608 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 665
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ 287
GH + ++ F P R + T + DG +L+W+ + L + V S+ + +
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 725
Query: 288 VAFGCDNGTL 297
+A G + T+
Sbjct: 726 LASGSMDNTV 735
Score = 206 (77.6 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S V F P + ++L+S GTV +W+ + T K + PV +F ++ V
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
G D+ R++ + ++ F H + HP +V T S D+ ++LWD N C
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD-VLNGNC 661
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ F GH + F+P A+ + DG + +W++ L H + C F
Sbjct: 662 VRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTV-CSLRF 719
Query: 197 ITSDKVYLITGSDDFTVKVWD 217
+ D L +GS D TV++WD
Sbjct: 720 -SRDGEILASGSMDNTVRLWD 739
Score = 190 (71.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 47/200 (23%), Positives = 98/200 (49%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV A F ++++ S+D +R++ T + ++ H + P + ++
Sbjct: 545 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 604
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D++ +LW + +++ + F GH V + F+P N A+ S D T+++W++ +
Sbjct: 605 HDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 662
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H+ I+ + + + + +L TG+ D V +WD V L+GHT+ V ++ F
Sbjct: 663 RIFTGHKGPIHSLTF--SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 720
Query: 241 PELRIIITASEDGTILIWNA 260
+ I+ + S D T+ +W+A
Sbjct: 721 RDGEILASGSMDNTVRLWDA 740
Score = 171 (65.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 52/215 (24%), Positives = 95/215 (44%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
++V+ + +RS+ + SDD L ++ D EK + GHS V ++
Sbjct: 492 STVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGAS 550
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN--CIDYFITSDKVYLITGSD 209
F+P D N S+S DGT+++W++ + FT KG N D + Y ++G
Sbjct: 551 FSP-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 605
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
D ++W + ++I GH +V FHP + T S D T+ +W+
Sbjct: 606 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIF 665
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV-KIGN 303
+ + S+ + +A G +G +++ IG+
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 700
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 259 (96.2 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 64/250 (25%), Positives = 114/250 (45%)
Query: 48 SQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSL 107
+ +T + VT +R+ K A I SDD R+ D T + +K H +
Sbjct: 491 ADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 550
Query: 108 AVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167
+ P ++L++S+D ++LW + + C ++GH++ V + F+P F S D
Sbjct: 551 SFSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 608
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
++W D H +NC + S+ Y+ TGS D TV++WD CV+I
Sbjct: 609 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 666
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ 287
GH + ++ F P R + T + DG +L+W+ + L + V S+ + +
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 726
Query: 288 VAFGCDNGTL 297
+A G + T+
Sbjct: 727 LASGSMDNTV 736
Score = 206 (77.6 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S V F P + ++L+S GTV +W+ + T K + PV +F ++ V
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 603
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
G D+ R++ + ++ F H + HP +V T S D+ ++LWD N C
Sbjct: 604 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD-VLNGNC 662
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ F GH + F+P A+ + DG + +W++ L H + C F
Sbjct: 663 VRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTV-CSLRF 720
Query: 197 ITSDKVYLITGSDDFTVKVWD 217
+ D L +GS D TV++WD
Sbjct: 721 -SRDGEILASGSMDNTVRLWD 740
Score = 190 (71.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 47/200 (23%), Positives = 98/200 (49%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV A F ++++ S+D +R++ T + ++ H + P + ++
Sbjct: 546 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 605
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D++ +LW + +++ + F GH V + F+P N A+ S D T+++W++ +
Sbjct: 606 HDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 663
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H+ I+ + + + + +L TG+ D V +WD V L+GHT+ V ++ F
Sbjct: 664 RIFTGHKGPIHSLTF--SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 721
Query: 241 PELRIIITASEDGTILIWNA 260
+ I+ + S D T+ +W+A
Sbjct: 722 RDGEILASGSMDNTVRLWDA 741
Score = 171 (65.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 52/215 (24%), Positives = 95/215 (44%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
++V+ + +RS+ + SDD L ++ D EK + GHS V ++
Sbjct: 493 STVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGAS 551
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN--CIDYFITSDKVYLITGSD 209
F+P D N S+S DGT+++W++ + FT KG N D + Y ++G
Sbjct: 552 FSP-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 606
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
D ++W + ++I GH +V FHP + T S D T+ +W+
Sbjct: 607 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIF 666
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV-KIGN 303
+ + S+ + +A G +G +++ IG+
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 701
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 257 (95.5 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 78/268 (29%), Positives = 129/268 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ +WN + ++ S VR E +V GS D +RV+D T +
Sbjct: 362 TLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMG 419
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +R V V++ + D ++K+WD E C T +GH++ V F+ +
Sbjct: 420 HVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQFDGIHV-- 474
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
S SLD +I++W++++ TL H+ + ++ D + L++G+ D TVK+WD +
Sbjct: 475 -VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNI-LVSGNADSTVKIWDIK 529
Query: 220 TKTCVQILEGHTNNVTAV-CFHPELRIIITASEDGTILIWNATTFR-LQN--TLSSGLER 275
T C+Q L+G + +AV C +IT+S+DGT+ +W+ T ++N TL SG
Sbjct: 530 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 589
Query: 276 --VWSIGYKKGSNQVAFGCDNGTLIVKI 301
VW I A G NGT K+
Sbjct: 590 GVVWRIRASNTKLVCAVGSRNGTEETKL 617
Score = 254 (94.5 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 77/274 (28%), Positives = 130/274 (47%)
Query: 30 PWVLASLYSGTVCI-WNYHSQTTEKSVKVTDSPVRTA-KFVAREHWIVCGSDDKFIRVFD 87
PW A + + W + K +K D V T +F IV GSDD ++V+
Sbjct: 270 PWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWS 327
Query: 88 YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
T ++ H + S + +++ S D+ +K+W+ E EC T GH+ V
Sbjct: 328 AVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG-ECIHTLYGHTSTV 384
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
+ K + S S D T+++W++++ L H + C+ Y D +++G
Sbjct: 385 RCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSG 437
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
+ DF VKVWD ET+TC+ L+GHTN V ++ F + ++ + S D +I +W+ T +
Sbjct: 438 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG-IHVV-SGSLDTSIRVWDVETGNCIH 495
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
TL+ G + + S G + N + G N VKI
Sbjct: 496 TLT-GHQSLTS-GMELKDNILVSG--NADSTVKI 525
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 248 (92.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 71/262 (27%), Positives = 120/262 (45%)
Query: 2 ETPLELQIE-KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS 60
+ P+ +I K F ++K FHP ++ +G ++ +S+ + +
Sbjct: 238 DKPMSWRITAKNFFYADGKLKCACFHPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQN 297
Query: 61 PVRTAKFVAREHWIVCGSDDKF-IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
V T W+ GS + V+++ + + + + + H D + +L P ++T
Sbjct: 298 AVNTVNINKTGEWLAFGSAKLGQLLVYEWQSESYILKQQGHFDSMNTLCYSPDGSRLVTG 357
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
SDD IK+WD + C TF H+ V Q F + F+S SLDGTI+ W++
Sbjct: 358 SDDGKIKIWDVRSGF-CLMTFTEHTSAVTQVQFAKRGQVLFSS-SLDGTIRAWDLIRFRN 415
Query: 180 KFTLDAHEK-GINCIDYFITSDKVYLITGSDD-FTVKVWDYETKTCVQILEGHTNNVTAV 237
T A + NC+ S +V ++ GS D F + VW +T + L GH ++ +
Sbjct: 416 FKTFTATSRVQFNCLAVD-PSGEV-IVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCL 473
Query: 238 CFHPELRIIITASEDGTILIWN 259
F E I+ +AS D TI IWN
Sbjct: 474 TFGKENSILASASWDKTIRIWN 495
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 93 SVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAF 152
+ K F + ++ HP ++ + +L++ E ++ Q+ + V
Sbjct: 246 TAKNFFYADGKLKCACFHPQSKLLVVGFTNGEFRLYEIE-DFNLIQSLSMGQNAVNTVNI 304
Query: 153 NPK-DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
N + F SA L G + ++ S + H +N + Y + D L+TGSDD
Sbjct: 305 NKTGEWLAFGSAKL-GQLLVYEWQSESYILKQQGHFDSMNTLCY--SPDGSRLVTGSDDG 361
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
+K+WD + C+ HT+ VT V F +++ ++S DGTI W+ FR T ++
Sbjct: 362 KIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTA 421
Score = 38 (18.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 234 VTAVCFHPELRIIITASEDGTIL 256
VTAV F P AS +G ++
Sbjct: 676 VTAVEFSPTTAAFAAASTEGLLI 698
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 248 (92.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 71/262 (27%), Positives = 120/262 (45%)
Query: 2 ETPLELQIE-KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS 60
+ P+ +I K F ++K FHP ++ +G ++ +S+ + +
Sbjct: 238 DKPMSWRITAKNFFYADGKLKCACFHPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQN 297
Query: 61 PVRTAKFVAREHWIVCGSDDKF-IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA 119
V T W+ GS + V+++ + + + + + H D + +L P ++T
Sbjct: 298 AVNTVNINKTGEWLAFGSAKLGQLLVYEWQSESYILKQQGHFDSMNTLCYSPDGSRLVTG 357
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
SDD IK+WD + C TF H+ V Q F + F+S SLDGTI+ W++
Sbjct: 358 SDDGKIKIWDVRSGF-CLMTFTEHTSAVTQVQFAKRGQVLFSS-SLDGTIRAWDLIRFRN 415
Query: 180 KFTLDAHEK-GINCIDYFITSDKVYLITGSDD-FTVKVWDYETKTCVQILEGHTNNVTAV 237
T A + NC+ S +V ++ GS D F + VW +T + L GH ++ +
Sbjct: 416 FKTFTATSRVQFNCLAVD-PSGEV-IVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCL 473
Query: 238 CFHPELRIIITASEDGTILIWN 259
F E I+ +AS D TI IWN
Sbjct: 474 TFGKENSILASASWDKTIRIWN 495
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 93 SVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAF 152
+ K F + ++ HP ++ + +L++ E ++ Q+ + V
Sbjct: 246 TAKNFFYADGKLKCACFHPQSKLLVVGFTNGEFRLYEIE-DFNLIQSLSMGQNAVNTVNI 304
Query: 153 NPK-DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
N + F SA L G + ++ S + H +N + Y + D L+TGSDD
Sbjct: 305 NKTGEWLAFGSAKL-GQLLVYEWQSESYILKQQGHFDSMNTLCY--SPDGSRLVTGSDDG 361
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
+K+WD + C+ HT+ VT V F +++ ++S DGTI W+ FR T ++
Sbjct: 362 KIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTA 421
Score = 38 (18.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 234 VTAVCFHPELRIIITASEDGTIL 256
VTAV F P AS +G ++
Sbjct: 676 VTAVEFSPTTAAFAAASTEGLLI 698
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 257 (95.5 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 78/268 (29%), Positives = 129/268 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ +WN + ++ S VR E +V GS D +RV+D T +
Sbjct: 442 TLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMG 499
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +R V V++ + D ++K+WD E C T +GH++ V F+ +
Sbjct: 500 HVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQFDGIHV-- 554
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
S SLD +I++W++++ TL H+ + ++ D + L++G+ D TVK+WD +
Sbjct: 555 -VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNI-LVSGNADSTVKIWDIK 609
Query: 220 TKTCVQILEGHTNNVTAV-CFHPELRIIITASEDGTILIWNATTFR-LQN--TLSSGLER 275
T C+Q L+G + +AV C +IT+S+DGT+ +W+ T ++N TL SG
Sbjct: 610 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 669
Query: 276 --VWSIGYKKGSNQVAFGCDNGTLIVKI 301
VW I A G NGT K+
Sbjct: 670 GVVWRIRASNTKLVCAVGSRNGTEETKL 697
Score = 254 (94.5 bits), Expect = 9.7e-21, P = 9.7e-21
Identities = 77/274 (28%), Positives = 130/274 (47%)
Query: 30 PWVLASLYSGTVCI-WNYHSQTTEKSVKVTDSPVRTA-KFVAREHWIVCGSDDKFIRVFD 87
PW A + + W + K +K D V T +F IV GSDD ++V+
Sbjct: 350 PWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWS 407
Query: 88 YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
T ++ H + S + +++ S D+ +K+W+ E EC T GH+ V
Sbjct: 408 AVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG-ECIHTLYGHTSTV 464
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
+ K + S S D T+++W++++ L H + C+ Y D +++G
Sbjct: 465 RCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSG 517
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
+ DF VKVWD ET+TC+ L+GHTN V ++ F + ++ + S D +I +W+ T +
Sbjct: 518 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG-IHVV-SGSLDTSIRVWDVETGNCIH 575
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
TL+ G + + S G + N + G N VKI
Sbjct: 576 TLT-GHQSLTS-GMELKDNILVSG--NADSTVKI 605
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 257 (95.5 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 78/268 (29%), Positives = 129/268 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ +WN + ++ S VR E +V GS D +RV+D T +
Sbjct: 447 TLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMG 504
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +R V V++ + D ++K+WD E C T +GH++ V F+ +
Sbjct: 505 HVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQFDGIHV-- 559
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
S SLD +I++W++++ TL H+ + ++ D + L++G+ D TVK+WD +
Sbjct: 560 -VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNI-LVSGNADSTVKIWDIK 614
Query: 220 TKTCVQILEGHTNNVTAV-CFHPELRIIITASEDGTILIWNATTFR-LQN--TLSSGLER 275
T C+Q L+G + +AV C +IT+S+DGT+ +W+ T ++N TL SG
Sbjct: 615 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 674
Query: 276 --VWSIGYKKGSNQVAFGCDNGTLIVKI 301
VW I A G NGT K+
Sbjct: 675 GVVWRIRASNTKLVCAVGSRNGTEETKL 702
Score = 254 (94.5 bits), Expect = 9.9e-21, P = 9.9e-21
Identities = 77/274 (28%), Positives = 130/274 (47%)
Query: 30 PWVLASLYSGTVCI-WNYHSQTTEKSVKVTDSPVRTA-KFVAREHWIVCGSDDKFIRVFD 87
PW A + + W + K +K D V T +F IV GSDD ++V+
Sbjct: 355 PWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWS 412
Query: 88 YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
T ++ H + S + +++ S D+ +K+W+ E EC T GH+ V
Sbjct: 413 AVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG-ECIHTLYGHTSTV 469
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
+ K + S S D T+++W++++ L H + C+ Y D +++G
Sbjct: 470 RCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSG 522
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
+ DF VKVWD ET+TC+ L+GHTN V ++ F + ++ + S D +I +W+ T +
Sbjct: 523 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG-IHVV-SGSLDTSIRVWDVETGNCIH 580
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
TL+ G + + S G + N + G N VKI
Sbjct: 581 TLT-GHQSLTS-GMELKDNILVSG--NADSTVKI 610
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 257 (95.5 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 77/268 (28%), Positives = 127/268 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ +WN + ++ S VR E +V GS D +RV+D T +
Sbjct: 495 TLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMG 552
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +R V V++ + D ++K+WD E C T +GH++ V F+ +
Sbjct: 553 HVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQFDGIHV-- 607
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
S SLD +I++W++++ TL H+ + ++ D + L++G+ D TVK+WD +
Sbjct: 608 -VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNI-LVSGNADSTVKIWDIK 662
Query: 220 TKTCVQILEG-HTNNVTAVCFHPELRIIITASEDGTILIWNATTFR-LQN--TLSSGLER 275
T C+Q L+G H + C +IT+S+DGT+ +W+ T ++N TL SG
Sbjct: 663 TGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESGGSG 722
Query: 276 --VWSIGYKKGSNQVAFGCDNGTLIVKI 301
VW I A G NGT K+
Sbjct: 723 GVVWRIRASNTKLVCAVGSRNGTEETKL 750
Score = 254 (94.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 77/274 (28%), Positives = 130/274 (47%)
Query: 30 PWVLASLYSGTVCI-WNYHSQTTEKSVKVTDSPVRTA-KFVAREHWIVCGSDDKFIRVFD 87
PW A + + W + K +K D V T +F IV GSDD ++V+
Sbjct: 403 PWKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWS 460
Query: 88 YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
T ++ H + S + +++ S D+ +K+W+ E EC T GH+ V
Sbjct: 461 AVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG-ECIHTLYGHTSTV 517
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
+ K + S S D T+++W++++ L H + C+ Y D +++G
Sbjct: 518 RCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSG 570
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
+ DF VKVWD ET+TC+ L+GHTN V ++ F + ++ + S D +I +W+ T +
Sbjct: 571 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG-IHVV-SGSLDTSIRVWDVETGNCIH 628
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
TL+ G + + S G + N + G N VKI
Sbjct: 629 TLT-GHQSLTS-GMELKDNILVSG--NADSTVKI 658
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 257 (95.5 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 69/265 (26%), Positives = 129/265 (48%)
Query: 38 SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97
SG +WN + E ++ D VRT + + W+V G +++ + N M +VK +
Sbjct: 167 SGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSN-MNNVKMY 225
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDL 157
+AH++ IR ++ PT ++ SDD +++WD+ + E + GH V ++P+
Sbjct: 226 QAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQE-ERVLRGHGADVKCVHWHPQK- 283
Query: 158 NTFASASLDGT--IQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
S S D I+IW+ S A TL AH+ + +D + +L+T S D +K+
Sbjct: 284 GMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTV--MDLKWNDNGNWLVTASRDHLLKL 341
Query: 216 WDYET-KTCVQILEGHTNNVTAVCFHP-ELRIIITASEDGTILIWNATTFRLQNTLSSGL 273
+D + VQ+ GH ++V +HP + + DG+IL WN T + + +
Sbjct: 342 FDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAH 401
Query: 274 ER-VWSIGYKKGSNQVAFGCDNGTL 297
+ VW++ + + + G ++ T+
Sbjct: 402 DSIVWTLAWHPLGHILCSGSNDHTI 426
Score = 182 (69.1 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 50/209 (23%), Positives = 97/209 (46%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K + + ++ + F PT ++ GT+ IW++ E+ ++ + V+ + +
Sbjct: 223 KMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQ 282
Query: 71 EHWIVCGSDDKF--IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ IV GS D I+++D + ++ AH+ + L + +++TAS D L+KL+
Sbjct: 283 KGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLF 342
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHE 187
D E Q F GH +++P F S DG+I WN+ + ++ AH+
Sbjct: 343 DIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHD 402
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVW 216
+ + + L +GS+D T+K W
Sbjct: 403 SIVWTLAWHPLGH--ILCSGSNDHTIKFW 429
Score = 173 (66.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 54/250 (21%), Positives = 107/250 (42%)
Query: 14 IQKSD-RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
+Q D V+++ + W++ + G V W + K + +R F +
Sbjct: 184 LQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNV-KMYQAHKEAIRGISFSPTDS 242
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL--IKLWDW 130
V GSDD +R++D+ + H ++ + HP +++ S D IK+WD
Sbjct: 243 KFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWD- 301
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKG 189
K+ T H VM +N N +AS D ++++++ + + + H+K
Sbjct: 302 PKSGIALATLHAHKSTVMDLKWNDNG-NWLVTASRDHLLKLFDIRNLREEVQVFRGHKKE 360
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-GHTNNVTAVCFHPELRIIIT 248
+ + + + ++ GSD ++ W+ T + +E H + V + +HP I+ +
Sbjct: 361 ASSVSWHPIHEGLFCSGGSDG-SILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCS 419
Query: 249 ASEDGTILIW 258
S D TI W
Sbjct: 420 GSNDHTIKFW 429
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 42/206 (20%), Positives = 91/206 (44%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
P+ T + +V G+ +++ T +AH+ +R++ +++T
Sbjct: 148 PIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGD 207
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
+K W + N + ++ H + +F+P D + F S S DGT++IW+ +
Sbjct: 208 HGGYVKYW--QSNMNNVKMYQAHKEAIRGISFSPTD-SKFVSGSDDGTLRIWDFMRCQEE 264
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFT--VKVWDYETKTCVQILEGHTNNVTAVC 238
L H + C+ + K +++GS D +K+WD ++ + L H + V +
Sbjct: 265 RVLRGHGADVKCVHWH--PQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLK 322
Query: 239 FHPELRIIITASEDGTILIWNATTFR 264
++ ++TAS D + +++ R
Sbjct: 323 WNDNGNWLVTASRDHLLKLFDIRNLR 348
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 254 (94.5 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 77/274 (28%), Positives = 130/274 (47%)
Query: 30 PWVLASLYSGTVCI-WNYHSQTTEKSVKVTDSPVRTA-KFVAREHWIVCGSDDKFIRVFD 87
PW A + + W + K +K D V T +F IV GSDD ++V+
Sbjct: 272 PWKSAYIRQHRIDTNWRRGELRSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWS 329
Query: 88 YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
T ++ H + S + +++ S D+ +K+W+ E EC T GH+ V
Sbjct: 330 AVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG-ECIHTLYGHTSTV 386
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
+ K + S S D T+++W++++ L H + C+ Y D +++G
Sbjct: 387 RCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSG 439
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
+ DF VKVWD ET+TC+ L+GHTN V ++ F + ++ + S D +I +W+ T +
Sbjct: 440 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG-IHVV-SGSLDTSIRVWDVETGNCIH 497
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
TL+ G + + S G + N + G N VKI
Sbjct: 498 TLT-GHQSLTS-GMELKDNILVSG--NADSTVKI 527
Score = 245 (91.3 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 69/237 (29%), Positives = 120/237 (50%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ +WN + ++ S VR E +V GS D +RV+D T +
Sbjct: 364 TLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMG 421
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +R V V++ + D ++K+WD E C T +GH++ V F+ +
Sbjct: 422 HVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQFDGIHV-- 476
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
S SLD +I++W++++ TL H+ + ++ D + L++G+ D TVK+WD +
Sbjct: 477 -VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNI-LVSGNADSTVKIWDIK 531
Query: 220 TKTCVQILEGHTNNVTAV-CFHPELRIIITASEDGTILIWNATTFR-LQN--TLSSG 272
T C+Q L+G + + +AV C +IT+S+DGT+ +W+ T ++N TL SG
Sbjct: 532 TGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 588
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 63/250 (25%), Positives = 114/250 (45%)
Query: 48 SQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSL 107
+ +T + VT +R+ K + I SDD R+ D T + +K H +
Sbjct: 488 ADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 547
Query: 108 AVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167
+ P ++L++S+D ++LW + + C ++GH++ V + F+P F S D
Sbjct: 548 SFSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 605
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
++W D H +NC + S+ Y+ TGS D TV++WD CV+I
Sbjct: 606 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 663
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ 287
GH + ++ F P R + T + DG +L+W+ + L + V S+ + +
Sbjct: 664 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 723
Query: 288 VAFGCDNGTL 297
+A G + T+
Sbjct: 724 LASGSMDNTV 733
Score = 206 (77.6 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S V F P + ++L+S GTV +W+ + T K + PV +F ++ V
Sbjct: 541 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 600
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
G D+ R++ + ++ F H + HP +V T S D+ ++LWD N C
Sbjct: 601 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD-VLNGNC 659
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ F GH + F+P A+ + DG + +W++ L H + C F
Sbjct: 660 VRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTV-CSLRF 717
Query: 197 ITSDKVYLITGSDDFTVKVWD 217
+ D L +GS D TV++WD
Sbjct: 718 -SRDGEILASGSMDNTVRLWD 737
Score = 190 (71.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 47/200 (23%), Positives = 98/200 (49%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV A F ++++ S+D +R++ T + ++ H + P + ++
Sbjct: 543 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 602
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D++ +LW + +++ + F GH V + F+P N A+ S D T+++W++ +
Sbjct: 603 HDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 660
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H+ I+ + + + + +L TG+ D V +WD V L+GHT+ V ++ F
Sbjct: 661 RIFTGHKGPIHSLTF--SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 718
Query: 241 PELRIIITASEDGTILIWNA 260
+ I+ + S D T+ +W+A
Sbjct: 719 RDGEILASGSMDNTVRLWDA 738
Score = 171 (65.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 52/215 (24%), Positives = 95/215 (44%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
++V+ + +RS+ + SDD L ++ D EK + GHS V ++
Sbjct: 490 STVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGAS 548
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN--CIDYFITSDKVYLITGSD 209
F+P D N S+S DGT+++W++ + FT KG N D + Y ++G
Sbjct: 549 FSP-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 603
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
D ++W + ++I GH +V FHP + T S D T+ +W+
Sbjct: 604 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIF 663
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV-KIGN 303
+ + S+ + +A G +G +++ IG+
Sbjct: 664 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 698
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 256 (95.2 bits), Expect = 7.5e-21, P = 7.5e-21
Identities = 63/250 (25%), Positives = 114/250 (45%)
Query: 48 SQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSL 107
+ +T + VT +R+ K + I SDD R+ D T + +K H +
Sbjct: 490 ADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 549
Query: 108 AVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167
+ P ++L++S+D ++LW + + C ++GH++ V + F+P F S D
Sbjct: 550 SFSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 607
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
++W D H +NC + S+ Y+ TGS D TV++WD CV+I
Sbjct: 608 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 665
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ 287
GH + ++ F P R + T + DG +L+W+ + L + V S+ + +
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 725
Query: 288 VAFGCDNGTL 297
+A G + T+
Sbjct: 726 LASGSMDNTV 735
Score = 206 (77.6 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S V F P + ++L+S GTV +W+ + T K + PV +F ++ V
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
G D+ R++ + ++ F H + HP +V T S D+ ++LWD N C
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD-VLNGNC 661
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ F GH + F+P A+ + DG + +W++ L H + C F
Sbjct: 662 VRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTV-CSLRF 719
Query: 197 ITSDKVYLITGSDDFTVKVWD 217
+ D L +GS D TV++WD
Sbjct: 720 -SRDGEILASGSMDNTVRLWD 739
Score = 190 (71.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 47/200 (23%), Positives = 98/200 (49%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV A F ++++ S+D +R++ T + ++ H + P + ++
Sbjct: 545 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 604
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D++ +LW + +++ + F GH V + F+P N A+ S D T+++W++ +
Sbjct: 605 HDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 662
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H+ I+ + + + + +L TG+ D V +WD V L+GHT+ V ++ F
Sbjct: 663 RIFTGHKGPIHSLTF--SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 720
Query: 241 PELRIIITASEDGTILIWNA 260
+ I+ + S D T+ +W+A
Sbjct: 721 RDGEILASGSMDNTVRLWDA 740
Score = 171 (65.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 52/215 (24%), Positives = 95/215 (44%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
++V+ + +RS+ + SDD L ++ D EK + GHS V ++
Sbjct: 492 STVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGAS 550
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN--CIDYFITSDKVYLITGSD 209
F+P D N S+S DGT+++W++ + FT KG N D + Y ++G
Sbjct: 551 FSP-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 605
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
D ++W + ++I GH +V FHP + T S D T+ +W+
Sbjct: 606 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIF 665
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV-KIGN 303
+ + S+ + +A G +G +++ IG+
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 700
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 254 (94.5 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 59/186 (31%), Positives = 93/186 (50%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ CG +D+ +V + H D++ HP+ + T+S D +KLWD K
Sbjct: 368 VSCG-EDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKG 426
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+C TFEGHS V ++ N AS+SLD T +IW+++S + TL H +N I
Sbjct: 427 -DCILTFEGHSRAVWSCTWHSCG-NFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSI 484
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
++F S+ L+T S D T+ +WD T C Q L GH +++ F P +I + G
Sbjct: 485 EFFPFSNT--LLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACG 542
Query: 254 TILIWN 259
+W+
Sbjct: 543 VTKLWD 548
Score = 190 (71.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 49/208 (23%), Positives = 101/208 (48%)
Query: 86 FDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH 145
FDY + ++ F HE + +++ P +++ +D+L K+ K T GH+
Sbjct: 340 FDYK-LKNI--FRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPK-CNVLLTGFGHTD 395
Query: 146 YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLI 205
++ F+P + A++S D T+++W++ T + H + + + + ++
Sbjct: 396 WLSDCCFHPSG-DKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGN--FVA 452
Query: 206 TGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL 265
+ S D T K+WD ++ C L GHT++V ++ F P ++T+S D T+ IW+A T
Sbjct: 453 SSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGIC 512
Query: 266 QNTLSSGLERVWSIGYKKGSNQVAFGCD 293
+ +L + + + + +A CD
Sbjct: 513 EQSLYGHMHSINDAIFDPRGHMIA-SCD 539
Score = 183 (69.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 55/243 (22%), Positives = 106/243 (43%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D + FHP+ + S TV +W+ + + V + + + +++
Sbjct: 394 TDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVAS 453
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
S DK +++D N+ H D + S+ P +LT+S DK + +WD + C
Sbjct: 454 SSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWD-ARTGIC 512
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
Q+ GH H + + F+P+ + AS G ++W+ ++D N ++ F
Sbjct: 513 EQSLYGHMHSINDAIFDPRG-HMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVN-F 570
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+S +V L S + + + D ++ + L GH N V F + I+ + DGT+
Sbjct: 571 DSSGRV-LAQASGNGVIHLLDLKSGE-IHKLMGHENEAHTVVFSHDGEILFSGGSDGTVR 628
Query: 257 IWN 259
W+
Sbjct: 629 TWS 631
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 232 (86.7 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 77/268 (28%), Positives = 127/268 (47%)
Query: 40 TVCIWNYHSQT--TEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97
+ CI + + T +K +K T F + +V GS D +R+++ T K F
Sbjct: 753 STCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTF 812
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDL 157
H + S+A+ +++ S + +KLWD + +T S + AF+P D
Sbjct: 813 VGHTGTVLSVAISSDGRQIVSGSIEA-VKLWD-AATGDLLKTLA--SGFAGSVAFSP-DS 867
Query: 158 NTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
A+ DG I IW+ + K TL+ H I I + + D L+T S D T+K WD
Sbjct: 868 RQIAAGFKDGKIFIWDAAGTLQK-TLERHPGAIMSIAF--SPDVKQLVTCSTDSTIKRWD 924
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVW 277
T VQ GH+ +VT + P+ ++I + S D TI +W+A T LQ TL+ L+ V
Sbjct: 925 I-TIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVE 983
Query: 278 SIGYKKGSNQVAFGCDNGTLIVKIGNSS 305
+ + + Q+ C + VKI +++
Sbjct: 984 KVVFSLDNRQIV-SCSSEA--VKIWDAA 1008
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 65/252 (25%), Positives = 109/252 (43%)
Query: 74 IVCGSDDKFIRVFDYNTMASVK---------EFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
I GSD I+++D T + K ++ ++ ++++A P +++ D
Sbjct: 635 IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGS 694
Query: 125 IKLWDWEKN--WECTQTFEGHSHYVMQSAFNPKDLNTF---ASASLDGTIQI----WNMD 175
+ LWD E F G S V + P + + A A QI W+ D
Sbjct: 695 VMLWDTTTGDRQEIADHF-GISK-VNYTYLQPPEQGGYGLHAGAFSADCKQIAAFGWSRD 752
Query: 176 SSAAKF----TLDAHE--KGIN--CIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
S+ T D + KG + C +SD L+TGS D TV++W+ T +
Sbjct: 753 STCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTF 812
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ 287
GHT V +V + R I++ S + + +W+A T L TL+SG S+ + S Q
Sbjct: 813 VGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGDLLKTLASGF--AGSVAFSPDSRQ 869
Query: 288 VAFGCDNGTLIV 299
+A G +G + +
Sbjct: 870 IAAGFKDGKIFI 881
Score = 129 (50.5 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 61/280 (21%), Positives = 120/280 (42%)
Query: 22 SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDK 81
SV F P + A G + IW+ + T +K+++ + + F +V S D
Sbjct: 860 SVAFSPDSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDS 918
Query: 82 FIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK-NWECTQTF 140
I+ +D T+ V+E H ++ ++ + P + + S DK IKLWD + + T T
Sbjct: 919 TIKRWDI-TIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTG 977
Query: 141 EGHSHYVMQSAFNPKDLNTFASASLD----GTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ + + + + + + +S ++ T ++ N S FT+ A I
Sbjct: 978 HLDTVEKVVFSLDNRQIVSCSSEAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASG 1037
Query: 197 ITSDKVYLITGSDDFTVKVW-DYETK-----TC----VQILEGHTNN-VTAVCFHPELRI 245
+ ++ L + +K Y +K T +Q+ E N +T + F P+ ++
Sbjct: 1038 HCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKL 1097
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGS 285
I++ S D I +W+A T LQ L + + + + + S
Sbjct: 1098 ILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSS 1137
Score = 55 (24.4 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWN 45
+ ++VK++ F P +++ Y G+V +W+
Sbjct: 670 QQEQVKAMAFLPDSKLIISGYYDGSVMLWD 699
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 255 (94.8 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 61/250 (24%), Positives = 113/250 (45%)
Query: 48 SQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSL 107
+ +T + VT +R+ K A I SDD R+ D T + +K H +
Sbjct: 470 ADSTVRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGT 529
Query: 108 AVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167
+ P ++L+ S+D ++LW + + C ++GH++ V + F+P F S D
Sbjct: 530 SFSPDRNYLLSCSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 587
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
++W D H + C + S+ Y+ TGS D TV++WD CV+I
Sbjct: 588 VARLWATDHYQPLRIFAGHLADVTCTRFHPNSN--YIATGSADRTVRLWDVLNGNCVRIF 645
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ 287
GH + ++ F P R + T + DG +L+W+ + L + ++++ + +
Sbjct: 646 TGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEI 705
Query: 288 VAFGCDNGTL 297
+A G + T+
Sbjct: 706 LASGSMDNTV 715
Score = 205 (77.2 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 52/201 (25%), Positives = 90/201 (44%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S V F P + ++L+ GTV +W+ + T K + PV +F ++ V
Sbjct: 523 SGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 582
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
G D+ R++ + ++ F H + HP ++ T S D+ ++LWD N C
Sbjct: 583 GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWD-VLNGNC 641
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ F GH + AF+P A+ + DG + +W++ L H I + +
Sbjct: 642 VRIFTGHKGPIHSLAFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRF- 699
Query: 197 ITSDKVYLITGSDDFTVKVWD 217
+ D L +GS D TV++WD
Sbjct: 700 -SRDGEILASGSMDNTVRLWD 719
Score = 185 (70.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 46/200 (23%), Positives = 97/200 (48%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV F ++++ S+D +R++ T + ++ H + P + ++
Sbjct: 525 PVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 584
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D++ +LW + +++ + F GH V + F+P N A+ S D T+++W++ +
Sbjct: 585 HDRVARLWATD-HYQPLRIFAGHLADVTCTRFHPNS-NYIATGSADRTVRLWDVLNGNCV 642
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H+ I+ + + + + +L TG+ D V +WD V L+GHT+ + A+ F
Sbjct: 643 RIFTGHKGPIHSLAF--SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFS 700
Query: 241 PELRIIITASEDGTILIWNA 260
+ I+ + S D T+ +W+A
Sbjct: 701 RDGEILASGSMDNTVRLWDA 720
Score = 180 (68.4 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 54/215 (25%), Positives = 95/215 (44%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
++V+ + +RS+ + SDD L ++ D EK + GHS V ++
Sbjct: 472 STVRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGTS 530
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN--CIDYFITSDKVYLITGSD 209
F+P D N S S DGT+++W++ + FT KG N D + Y ++G
Sbjct: 531 FSP-DRNYLLSCSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 585
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
D ++W + ++I GH +VT FHP I T S D T+ +W+
Sbjct: 586 DRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIF 645
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIV-KIGN 303
+ + S+ + +A G +G +++ IG+
Sbjct: 646 TGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGH 680
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 67/271 (24%), Positives = 122/271 (45%)
Query: 38 SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97
SG V I+ + K+++ + + KF + + S DK + ++ + + +
Sbjct: 24 SGNVPIYKPYRHL--KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY 81
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDL 157
E H I LA + +ASDD +++WD +EC + GH+++V FNP
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS- 140
Query: 158 NTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
N S S D TI+IW + + + AH I+ + + D +++ S D + K+WD
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHF--NRDGSLIVSASHDGSCKIWD 198
Query: 218 YETKTCVQ-ILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERV 276
+ TC++ +++ + V+ F P + I+ A+ D T+ + N T + + +V
Sbjct: 199 AKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKV 258
Query: 277 WSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
+ I AF NG IV G+ C
Sbjct: 259 FCI-------TSAFSVTNGKYIVS-GSEDNC 281
Score = 216 (81.1 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 66/225 (29%), Positives = 109/225 (48%)
Query: 40 TVCIWNYHSQ-TTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFE 98
T+ IW+ S K ++ + V F + IV GS D+ IR+++ T V+ +
Sbjct: 108 TLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIK 167
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTF-EGHSHYVMQSAFNPKDL 157
AH I S+ + +++AS D K+WD K C +T + S V + F+P
Sbjct: 168 AHSMPISSVHFNRDGSLIVSASHDGSCKIWD-AKEGTCLKTLIDDKSPAVSFAKFSPNG- 225
Query: 158 NTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID--YFITSDKVYLITGSDDFTVKV 215
A+LD T+++ N + H + CI + +T+ K Y+++GS+D V +
Sbjct: 226 KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGK-YIVSGSEDNCVYL 284
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASE--DGTILIW 258
WD + + +Q LEGHT+ V +V HP I ++ D TI IW
Sbjct: 285 WDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 200 (75.5 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 54/255 (21%), Positives = 119/255 (46%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT-MASVKEFE 98
T+ +W+ + + + S + + + H+ SDD +R++D + +K
Sbjct: 66 TMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLR 125
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H +++ + +P +++ S D+ I++W+ K +C + + HS + FN +D +
Sbjct: 126 GHTNFVFCVNFNPPSNLIVSGSFDETIRIWE-VKTGKCVRMIKAHSMPISSVHFN-RDGS 183
Query: 159 TFASASLDGTIQIWNM-DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
SAS DG+ +IW+ + + K +D ++ F + K +++ + D T+K+ +
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAK-FSPNGK-FILVATLDSTLKLSN 241
Query: 218 YETKTCVQILEGHTNNVTAV--CFH-PELRIIITASEDGTILIWNATTFRLQNTLSSGLE 274
Y T +++ GHTN V + F + I++ SED + +W+ + L +
Sbjct: 242 YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTD 301
Query: 275 RVWSIGYKKGSNQVA 289
V S+ N+++
Sbjct: 302 AVISVSCHPVQNEIS 316
Score = 138 (53.6 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 41/162 (25%), Positives = 79/162 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP-VRTAKFVAREHWIVCGS 78
+ SV F+ ++++ + G+ IW+ T K++ SP V AKF +I+ +
Sbjct: 173 ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVAT 232
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSL--AVHPTF-PFVLTASDDKLIKLWDWEKNWE 135
D +++ +Y T +K + H + + + A T ++++ S+D + LWD +
Sbjct: 233 LDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQAR-N 291
Query: 136 CTQTFEGHSHYVMQSAFNPKDLNTFASAS-LDGTIQIWNMDS 176
Q EGH+ V+ + +P +S + LD TI+IW D+
Sbjct: 292 ILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWKQDA 333
Score = 130 (50.8 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 39/197 (19%), Positives = 83/197 (42%)
Query: 23 VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKF 82
V+F+P +++ + T+ IW + + +K P+ + F IV S D
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGS 193
Query: 83 IRVFDYNTMASVKEFEAHEDYIRSLA-VHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE 141
+++D +K + S A P F+L A+ D +KL ++ + + +
Sbjct: 194 CKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATG-KFLKVYT 252
Query: 142 GHSHYV--MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH++ V + SAF+ + S S D + +W++ + L+ H + +
Sbjct: 253 GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQ 312
Query: 200 DKVYLITGSDDFTVKVW 216
+++ D T+++W
Sbjct: 313 NEISSSGNHLDKTIRIW 329
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 254 (94.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 75/305 (24%), Positives = 141/305 (46%)
Query: 2 ETPLELQIEKEFIQKS-DRVK----SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVK 56
+ P++ + K FI+ + ++VK SV + P ++ +G +WN + E ++
Sbjct: 114 DVPVDCILTK-FIRTAMNKVKCPVYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQ 172
Query: 57 VTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDY-IRSLAVHPTFPF 115
DS +R K+ + E W++ +++ + N M + F AH+D IR LA PT
Sbjct: 173 AHDSAIRALKWASNEQWLLSADQGGYVKYWQPN-MNNAHMFSAHKDEAIRGLAFAPTDVK 231
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP-KDLNTFASASLDGTIQIWNM 174
TASDD ++WD+ + E + GH V ++P K L S ++IW+
Sbjct: 232 FATASDDGTARVWDFARYTE-ERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDP 290
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNV 234
S + TL H+ + +++ + +L+TG D VK++D ++ H V
Sbjct: 291 KSGSCLATLQEHKSSVMAVEF--NKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEV 348
Query: 235 TAVCFHP-ELRIIITASEDGTILIWNATTFRLQNTLSSGLER-VWSIGYKKGSNQVAFGC 292
++ +HP + ++ DG+I+ W + L ++ +WS+ + + +A G
Sbjct: 349 ISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGS 408
Query: 293 -DNGT 296
DN T
Sbjct: 409 NDNNT 413
Score = 162 (62.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 47/204 (23%), Positives = 93/204 (45%)
Query: 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV 75
K + ++ + F PT + GT +W++ T E+ ++ + VR + + I
Sbjct: 216 KDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIA 275
Query: 76 CGSDD--KFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
GS D + ++++D + + + + H+ + ++ + ++LT D L+K++D
Sbjct: 276 TGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMM 335
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHEKGINC 192
E +T+ H V+ A++P F S DG+I W +D L+ AH++ I
Sbjct: 336 KEM-RTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWS 394
Query: 193 IDYFITSDKVYLITGSDDFTVKVW 216
+ + L TGS+D K W
Sbjct: 395 MKWHPLGH--ILATGSNDNNTKFW 416
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 252 (93.8 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 67/285 (23%), Positives = 122/285 (42%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F+ + +VDF + TV +W+ VT +R K A +
Sbjct: 422 FLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWS-----------VTPKKLRKVKSAADLN 470
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
I SDD R+ D T + K H + ++ P ++L++S+D I+LW +
Sbjct: 471 LIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQ- 529
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ C ++GH++ V + F+P F S D ++W D H + C
Sbjct: 530 TFTCLVGYKGHNYPVWDTQFSPFGYY-FVSGGHDRVARLWATDHYQPLRIFAGHLADVTC 588
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ S+ Y+ TGS D TV++WD CV+I GH + ++ F P + + + S D
Sbjct: 589 TRFHPNSN--YVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTD 646
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
G +L+W+ + L ++++ + + +A G + T+
Sbjct: 647 GRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTV 691
Score = 184 (69.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 48/199 (24%), Positives = 95/199 (47%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV F ++++ S+D IR++ T + ++ H + P + ++
Sbjct: 501 PVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGG 560
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D++ +LW + +++ + F GH V + F+P N A+ S D T+++W++ +
Sbjct: 561 HDRVARLWATD-HYQPLRIFAGHLADVTCTRFHPNS-NYVATGSSDRTVRLWDVLNGNCV 618
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H+ I+ + F + K +L +GS D V +WD + L+GHT + A+ F
Sbjct: 619 RIFTGHKGPIHSLA-FSPNGK-FLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFS 676
Query: 241 PELRIIITASEDGTILIWN 259
+ II + S D T+ +W+
Sbjct: 677 RDGEIIASGSIDNTVRLWD 695
Score = 178 (67.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 51/187 (27%), Positives = 86/187 (45%)
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
SDD L ++ D EK ++ GHS V +F+P D N S+S DGTI++W++ +
Sbjct: 476 SDDVLERIMD-EKTSSESKILHGHSGPVYGVSFSP-DRNYLLSSSEDGTIRLWSLQT--- 530
Query: 180 KFTLDAHEKGIN--CIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
FT KG N D + Y ++G D ++W + ++I GH +VT
Sbjct: 531 -FTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT 589
Query: 238 CFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
FHP + T S D T+ +W+ + + S+ + +A G +G +
Sbjct: 590 RFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRV 649
Query: 298 IV-KIGN 303
++ IG+
Sbjct: 650 LLWDIGH 656
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
V +F +++ GS D+ +R++D V+ F H+ I SLA P F+ + S
Sbjct: 586 VTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGST 645
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
D + LWD + +GH+ + F+ +D AS S+D T+++W++
Sbjct: 646 DGRVLLWDIGHGLMIAE-LKGHTGTIYALKFS-RDGEIIASGSIDNTVRLWDV 696
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 249 (92.7 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 68/245 (27%), Positives = 111/245 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + + V S+ +LA+ G C +W+ + S+ SPV + +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C + GHS V F+P D ASA+ D T+++W++ + H
Sbjct: 132 WDIRRKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+N +++ ++ L +GS D T++ WD E V +EG V +V F+P+ +
Sbjct: 190 GPVNVVEFH--PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 248 TASED 252
+ +D
Sbjct: 248 SGCQD 252
Score = 217 (81.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 52/221 (23%), Positives = 95/221 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G DD + ++ N + H + S+ ++ ++ S I++WD E
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P AS S D I++W++ F H + + C+
Sbjct: 96 -KILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D +L + +DD TVK+WD + GHT V V FHP ++ + S D
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
TI W+ F++ + + V S+ + + GC +
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 204 (76.9 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 52/210 (24%), Positives = 99/210 (47%)
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
T ++E AH + SL + +L T DD + LW K C + GH+ V
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVE 67
Query: 149 QSAFN-PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
N P++L + S G+I++W+++++ TL H+ I +D+ + ++ +G
Sbjct: 68 SVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASG 123
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
S D +K+WD K CV GH+ V + F P+ + + +A++D T+ +W+ T ++ +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
V + + +A G + T+
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 126 (49.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 30/123 (24%), Positives = 54/123 (43%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH ++ + S ++ L TG DD V +W C+ L GHT+ V +V +
Sbjct: 18 AHASNVSSLVLGKASGRL-LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
+I+ S+ G+I +W+ ++ TL + S+ + VA G + + +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 305 SGC 307
GC
Sbjct: 137 KGC 139
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 249 (92.7 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 68/245 (27%), Positives = 111/245 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + + V S+ +LA+ G C +W+ + S+ SPV + +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C + GHS V F+P D ASA+ D T+++W++ + H
Sbjct: 132 WDIRRKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+N +++ ++ L +GS D T++ WD E V +EG V +V F+P+ +
Sbjct: 190 GPVNVVEFH--PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 248 TASED 252
+ +D
Sbjct: 248 SGCQD 252
Score = 217 (81.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 52/221 (23%), Positives = 95/221 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G DD + ++ N + H + S+ ++ ++ S I++WD E
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P AS S D I++W++ F H + + C+
Sbjct: 96 -KILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D +L + +DD TVK+WD + GHT V V FHP ++ + S D
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
TI W+ F++ + + V S+ + + GC +
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 204 (76.9 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 52/210 (24%), Positives = 99/210 (47%)
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
T ++E AH + SL + +L T DD + LW K C + GH+ V
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVE 67
Query: 149 QSAFN-PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
N P++L + S G+I++W+++++ TL H+ I +D+ + ++ +G
Sbjct: 68 SVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASG 123
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
S D +K+WD K CV GH+ V + F P+ + + +A++D T+ +W+ T ++ +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
V + + +A G + T+
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 126 (49.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 30/123 (24%), Positives = 54/123 (43%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH ++ + S ++ L TG DD V +W C+ L GHT+ V +V +
Sbjct: 18 AHASNVSSLVLGKASGRL-LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
+I+ S+ G+I +W+ ++ TL + S+ + VA G + + +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 305 SGC 307
GC
Sbjct: 137 KGC 139
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 249 (92.7 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 68/245 (27%), Positives = 111/245 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + + V S+ +LA+ G C +W+ + S+ SPV + +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C + GHS V F+P D ASA+ D T+++W++ + H
Sbjct: 132 WDIRRKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+N +++ ++ L +GS D T++ WD E V +EG V +V F+P+ +
Sbjct: 190 GPVNVVEFH--PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 248 TASED 252
+ +D
Sbjct: 248 SGCQD 252
Score = 217 (81.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 52/221 (23%), Positives = 95/221 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G DD + ++ N + H + S+ ++ ++ S I++WD E
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P AS S D I++W++ F H + + C+
Sbjct: 96 -KILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D +L + +DD TVK+WD + GHT V V FHP ++ + S D
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
TI W+ F++ + + V S+ + + GC +
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 204 (76.9 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 52/210 (24%), Positives = 99/210 (47%)
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
T ++E AH + SL + +L T DD + LW K C + GH+ V
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVE 67
Query: 149 QSAFN-PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
N P++L + S G+I++W+++++ TL H+ I +D+ + ++ +G
Sbjct: 68 SVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASG 123
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
S D +K+WD K CV GH+ V + F P+ + + +A++D T+ +W+ T ++ +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
V + + +A G + T+
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 126 (49.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 30/123 (24%), Positives = 54/123 (43%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH ++ + S ++ L TG DD V +W C+ L GHT+ V +V +
Sbjct: 18 AHASNVSSLVLGKASGRL-LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
+I+ S+ G+I +W+ ++ TL + S+ + VA G + + +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 305 SGC 307
GC
Sbjct: 137 KGC 139
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 249 (92.7 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 68/245 (27%), Positives = 111/245 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + + V S+ +LA+ G C +W+ + S+ SPV + +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C + GHS V F+P D ASA+ D T+++W++ + H
Sbjct: 132 WDIRRKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+N +++ ++ L +GS D T++ WD E V +EG V +V F+P+ +
Sbjct: 190 GPVNVVEFH--PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 248 TASED 252
+ +D
Sbjct: 248 SGCQD 252
Score = 217 (81.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 52/221 (23%), Positives = 95/221 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G DD + ++ N + H + S+ ++ ++ S I++WD E
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P AS S D I++W++ F H + + C+
Sbjct: 96 -KILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D +L + +DD TVK+WD + GHT V V FHP ++ + S D
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
TI W+ F++ + + V S+ + + GC +
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 204 (76.9 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 52/210 (24%), Positives = 99/210 (47%)
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
T ++E AH + SL + +L T DD + LW K C + GH+ V
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVE 67
Query: 149 QSAFN-PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
N P++L + S G+I++W+++++ TL H+ I +D+ + ++ +G
Sbjct: 68 SVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASG 123
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
S D +K+WD K CV GH+ V + F P+ + + +A++D T+ +W+ T ++ +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
V + + +A G + T+
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 30/123 (24%), Positives = 54/123 (43%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH ++ + S ++ L TG DD V +W C+ L GHT+ V +V +
Sbjct: 18 AHASNVSSLVLGKASGRL-LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
+I+ S+ G+I +W+ ++ TL + S+ + VA G + + +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 305 SGC 307
GC
Sbjct: 137 KGC 139
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 251 (93.4 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 54/152 (35%), Positives = 86/152 (56%)
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
+ SDD+ ++LWD QT EGHS +V+ AF+P D AS S D T+++W+ +
Sbjct: 712 SGSDDETVRLWD-PATGSLQQTLEGHSGWVLSVAFSP-DGRLLASGSFDKTVRLWDPATG 769
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
+ + TL H + + + + D L +GS D TV++WD T + Q L GH++ V +V
Sbjct: 770 SLQQTLRGHSNWVRSVAF--SPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSV 827
Query: 238 CFHPELRIIITASEDGTILIWNATTFRLQNTL 269
F P+ R++ + S D T+ +W+ T LQ TL
Sbjct: 828 AFSPDGRLLASGSFDKTVRLWDPATGTLQQTL 859
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 50/160 (31%), Positives = 82/160 (51%)
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
QT EGHS+ V AS S D T+++W+ + + + TL+ H + + +
Sbjct: 697 QTLEGHSNSVWA---------VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAF-- 745
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
+ D L +GS D TV++WD T + Q L GH+N V +V F P+ R++ + S D T+ +
Sbjct: 746 SPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRL 805
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
W+ T LQ TL + V S+ + +A G + T+
Sbjct: 806 WDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTV 845
Score = 175 (66.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 47/166 (28%), Positives = 83/166 (50%)
Query: 20 VKSVDFHPTQPW-VLASLYSG-TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG 77
+++++ H W VLAS TV +W+ + + +++++ V + F + G
Sbjct: 696 LQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASG 755
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT 137
S DK +R++D T + + H +++RS+A P + + S DK ++LWD
Sbjct: 756 SFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD-PATGSLQ 814
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
QT GHS V AF+P D AS S D T+++W+ + + TL
Sbjct: 815 QTLRGHSDTVRSVAFSP-DGRLLASGSFDKTVRLWDPATGTLQQTL 859
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 248 (92.4 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 67/245 (27%), Positives = 111/245 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + + V S+ +LA+ G C +W+ + S+ SPV + +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C + GHS V F+P D ASA+ D T+++W++ + H
Sbjct: 132 WDIRRKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+N +++ ++ L +GS D T++ WD E V +EG V ++ F+P+ +
Sbjct: 190 GPVNVVEFH--PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLY 247
Query: 248 TASED 252
+ +D
Sbjct: 248 SGCQD 252
Score = 218 (81.8 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 53/221 (23%), Positives = 95/221 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G DD + ++ N + H + S+ ++ ++ S I++WD E
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P AS S D I++W++ F H + + C+
Sbjct: 96 -KILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D +L + +DD TVK+WD + GHT V V FHP ++ + S D
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
TI W+ F++ + + V SI + + GC +
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD 252
Score = 204 (76.9 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 52/210 (24%), Positives = 99/210 (47%)
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
T ++E AH + SL + +L T DD + LW K C + GH+ V
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVE 67
Query: 149 QSAFN-PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
N P++L + S G+I++W+++++ TL H+ I +D+ + ++ +G
Sbjct: 68 SVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASG 123
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
S D +K+WD K CV GH+ V + F P+ + + +A++D T+ +W+ T ++ +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
V + + +A G + T+
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 30/123 (24%), Positives = 54/123 (43%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH ++ + S ++ L TG DD V +W C+ L GHT+ V +V +
Sbjct: 18 AHASNVSSLVLGKASGRL-LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
+I+ S+ G+I +W+ ++ TL + S+ + VA G + + +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 305 SGC 307
GC
Sbjct: 137 KGC 139
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 246 (91.7 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 64/230 (27%), Positives = 117/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ ++ ++ + V ++ E I+ GS D +RV+D NT
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 332
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 333 EMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 390
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++WN + TL+ H++GI C+ Y D++ +++GS
Sbjct: 391 VDFDDKYI---VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 443
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 444 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 491
Score = 171 (65.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
KG+ C+ Y D +++G D T+K+WD T C +IL GHT +V +C + R+II
Sbjct: 263 KGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVII 316
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
T S D T+ +W+ T + NTL E V + + G
Sbjct: 317 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 353
Score = 168 (64.2 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W+
Sbjct: 356 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 411
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 412 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 467
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT---------CVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD C++ L H+ V + F
Sbjct: 468 VRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 523
Query: 241 PELRIIITASEDGTILIWN 259
E +I+ ++S D TILIW+
Sbjct: 524 -EFQIV-SSSHDDTILIWD 540
Score = 161 (61.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + EC + GH+ V+ ++ + + T +S D T+++W+++
Sbjct: 275 IVSGLRDNTIKIWD-KNTLECKRILTGHTGSVLCLQYDERVIITGSS---DSTVRVWDVN 330
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 331 TGEMLNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 386
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +WN +T TL+ + + Y+ V G
Sbjct: 387 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 442
Query: 293 DNGTL 297
+ T+
Sbjct: 443 SDNTI 447
Score = 145 (56.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V++ +T V+
Sbjct: 363 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 420
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 421 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 477
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +++ S D
Sbjct: 478 I---VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 534
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 535 TILIWDF 541
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 246 (91.7 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 64/230 (27%), Positives = 117/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ ++ ++ + V ++ E I+ GS D +RV+D NT
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 373
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++WN + TL+ H++GI C+ Y D++ +++GS
Sbjct: 432 VDFDDKYI---VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 484
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 171 (65.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
KG+ C+ Y D +++G D T+K+WD T C +IL GHT +V +C + R+II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
T S D T+ +W+ T + NTL E V + + G
Sbjct: 358 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 394
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W+
Sbjct: 397 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 453 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT---------CVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD C++ L H+ V + F
Sbjct: 509 VRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 564
Query: 241 PELRIIITASEDGTILIWN 259
E +I+ ++S D TILIW+
Sbjct: 565 -EFQIV-SSSHDDTILIWD 581
Score = 161 (61.7 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + EC + GH+ V+ ++ + + T +S D T+++W+++
Sbjct: 316 IVSGLRDNTIKIWD-KNTLECKRILTGHTGSVLCLQYDERVIITGSS---DSTVRVWDVN 371
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 372 TGEMLNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +WN +T TL+ + + Y+ V G
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 293 DNGTL 297
+ T+
Sbjct: 484 SDNTI 488
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V++ +T V+
Sbjct: 404 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 462 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 518
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +++ S D
Sbjct: 519 I---VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 575
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 576 TILIWDF 582
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 244 (91.0 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 64/230 (27%), Positives = 116/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ + ++ + V ++ E I+ GS D +RV+D NT
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 274
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 275 EMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 332
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++WN + TL+ H++GI C+ Y D++ +++GS
Sbjct: 333 VDFDDKYI---VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 385
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 386 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 433
Score = 171 (65.3 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
KG+ C+ Y D +++G D T+K+WD T C +IL GHT +V +C + R+II
Sbjct: 205 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 258
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
T S D T+ +W+ T + NTL E V + + G
Sbjct: 259 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 295
Score = 168 (64.2 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 56/199 (28%), Positives = 98/199 (49%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W+
Sbjct: 298 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 353
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 354 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 409
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDY----ETKT-----CVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD + + C++ L H+ V + F
Sbjct: 410 VRCIRF----DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 465
Query: 241 PELRIIITASEDGTILIWN 259
E +I+ ++S D TILIW+
Sbjct: 466 -EFQIV-SSSHDDTILIWD 482
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + EC + GH+ V+ ++ + + T +S D T+++W+++
Sbjct: 217 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQYDERVIITGSS---DSTVRVWDVN 272
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 273 TGEMLNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +WN +T TL+ + + Y+ V G
Sbjct: 329 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 384
Query: 293 DNGTL 297
+ T+
Sbjct: 385 SDNTI 389
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V++ +T V+
Sbjct: 305 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 362
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 363 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 419
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +++ S D
Sbjct: 420 I---VSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 476
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 477 TILIWDF 483
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 249 (92.7 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 79/277 (28%), Positives = 128/277 (46%)
Query: 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV 75
+SD ++S+ +L S S +V +WN S + +S+ D + T H IV
Sbjct: 396 RSD-IRSLSLSSNDQ-MLVSTSSESVKVWNMKSLSCIRSI-ACDYGLCTVFAPGNLHVIV 452
Query: 76 CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK--- 132
G+ I VF+ + A V +AHE + SL + P V + DKL+K WD+E
Sbjct: 453 -GTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIAS 511
Query: 133 ---------NWECTQTFEGHSHYVMQSAFNPKDLNTFASASL-DGTIQIWNMDSSAAKFT 182
N T+T + S V+ ++ N F + SL D T++I+ D+ +
Sbjct: 512 QENSKHKVLNLSLTKTLKVESD-VLALKYSAD--NKFLAVSLLDNTVKIFYTDTVKFHLS 568
Query: 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
L H+ + C+D I+ D +ITGS D +K+W + C + H +++ V F P
Sbjct: 569 LYGHKLPVMCLD--ISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPS 626
Query: 243 LRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
I+AS+D I W+A F T+ + VWS+
Sbjct: 627 THHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSL 663
Score = 182 (69.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 42/153 (27%), Positives = 70/153 (45%)
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF 181
D I++W +++ F GH V FN N S S D + +W++ + + F
Sbjct: 80 DGSIRIWSMS-DYQLQAVFNGHRGSVTTMTFNRLG-NILVSGSKDTEVIVWDIITESGLF 137
Query: 182 TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
L H I + S+ +LIT S D +K+WD ET+ C+Q + GH N + + +P
Sbjct: 138 RLRGHRDQITSVKLLERSN--HLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNP 195
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLE 274
+ + + + D I W + Q SG+E
Sbjct: 196 DETRLCSCTSDNQIRFWRIPSNERQREDGSGIE 228
Score = 159 (61.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 42/155 (27%), Positives = 69/155 (44%)
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
I +WD K +E + + KD AS DG+I+IW+M + +
Sbjct: 39 ISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFN 98
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
H + + + + L++GS D V VWD T++ + L GH + +T+V
Sbjct: 99 GHRGSVTTMTFNRLGN--ILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSN 156
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
+IT+S+DG I IW+ T T+ +W I
Sbjct: 157 HLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGI 191
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 43/147 (29%), Positives = 66/147 (44%)
Query: 32 VLASLYS-GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90
+LAS YS G++ IW+ + V T F + +V GS D + V+D T
Sbjct: 73 LLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIIT 132
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQS 150
+ + H D I S+ + ++T+S D IK+WD E C QT GH + +
Sbjct: 133 ESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQ-HCIQTIVGHRNPIWGI 191
Query: 151 AFNPKDLNTFASASLDGTIQIWNMDSS 177
NP D S + D I+ W + S+
Sbjct: 192 DVNP-DETRLCSCTSDNQIRFWRIPSN 217
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 60/266 (22%), Positives = 109/266 (40%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIR 84
F P V+ +GT+ ++ S S+K + V + + G DK ++
Sbjct: 443 FAPGNLHVIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVK 502
Query: 85 VFDYNTMASVKEFEAHE----DYIRSLAVHPTFPFVLTASDDKL--IKLWDWEKNWECTQ 138
+D+ +AS +E H+ ++L V + ++D+K + L D T
Sbjct: 503 FWDFELIAS-QENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTD 561
Query: 139 TFEGH----SHYVMQSAFNPKDLNTFA-SASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
T + H H + + D +T + S D I+IW +D + AH+ I +
Sbjct: 562 TVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQV 621
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
FI S + I+ S D +K WD + +Q +E H V ++ I+ S D
Sbjct: 622 S-FIPSTH-HFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDR 679
Query: 254 TILIWNATTFRL--QNTLSSGLERVW 277
+I I+N T + ++ +E+ W
Sbjct: 680 SIRIFNQTETPIFVESDRQREMEQTW 705
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 251 (93.4 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 76/268 (28%), Positives = 130/268 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
T+ +W+ S +++ S VR + +V GS D +RV+D + +
Sbjct: 1056 TLKVWDMDSGACVHTLQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVG 1113
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H +R V +++ + D ++K+W E+ EC T +GH++ V F+ L+
Sbjct: 1114 HLAAVR--CVQYDGKLIVSGAYDYMVKIWHPERQ-ECLHTLQGHTNRVYSLQFD--GLHV 1168
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
S SLD +I++W++++ K TL H+ + ++ + L++G+ D TVKVWD
Sbjct: 1169 -VSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMEL----RQNILVSGNADSTVKVWDIT 1223
Query: 220 TKTCVQILEGHTNNVTAV-CFHPELRIIITASEDGTILIWNATTFR-LQN--TLSSGLER 275
T C+Q L G + +AV C R ++T+S+DGT+ +W+ T ++N L SG
Sbjct: 1224 TGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSG 1283
Query: 276 --VWSIGYKKGSNQVAFGCDNGTLIVKI 301
VW I A G NGT K+
Sbjct: 1284 GVVWRIRANDTKLICAVGSRNGTEETKL 1311
Score = 230 (86.0 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 73/290 (25%), Positives = 132/290 (45%)
Query: 16 KSDRVK---SVDFHP-TQPWVLASLYSGTVCI-WNYHSQTTEKSVKVTDSPVRTA-KFVA 69
+SDR K + P PW A + + + W K +K D V T +F
Sbjct: 946 RSDRPKRGRDGNMPPIASPWKAAYMRQHIIEMNWRSRPVRKPKVLKGHDDHVITCLQFSG 1005
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV GSDD ++V+ ++ H + S + +++ S D+ +K+WD
Sbjct: 1006 NR--IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNI--IISGSTDRTLKVWD 1061
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
+ C T +GH+ V + + S S D T+++W+++ + L H
Sbjct: 1062 MDSG-ACVHTLQGHTSTVRCMHLHGSKV---VSGSRDATLRVWDIEQGSCLHVLVGHLAA 1117
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
+ C+ Y D +++G+ D+ VK+W E + C+ L+GHTN V ++ F L ++ +
Sbjct: 1118 VRCVQY----DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDG-LHVV-SG 1171
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
S D +I +W+ T ++TL G + + S G + N + G + T+ V
Sbjct: 1172 SLDTSIRVWDVETGNCKHTLM-GHQSLTS-GMELRQNILVSGNADSTVKV 1219
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 244 (91.0 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 64/230 (27%), Positives = 116/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ + ++ + V ++ E I+ GS D +RV+D NT
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 337
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 338 EMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 395
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++WN + TL+ H++GI C+ Y D++ +++GS
Sbjct: 396 VDFDDKYI---VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 448
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 449 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 496
Score = 171 (65.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
KG+ C+ Y D +++G D T+K+WD T C +IL GHT +V +C + R+II
Sbjct: 268 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 321
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
T S D T+ +W+ T + NTL E V + + G
Sbjct: 322 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 358
Score = 168 (64.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W+
Sbjct: 361 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 416
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 417 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 472
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT---------CVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD C++ L H+ V + F
Sbjct: 473 VRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 528
Query: 241 PELRIIITASEDGTILIWN 259
E +I+ ++S D TILIW+
Sbjct: 529 -EFQIV-SSSHDDTILIWD 545
Score = 161 (61.7 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + EC + GH+ V+ ++ + + T +S D T+++W+++
Sbjct: 280 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQYDERVIITGSS---DSTVRVWDVN 335
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 336 TGEMLNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 391
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +WN +T TL+ + + Y+ V G
Sbjct: 392 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 447
Query: 293 DNGTL 297
+ T+
Sbjct: 448 SDNTI 452
Score = 145 (56.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V++ +T V+
Sbjct: 368 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 425
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 426 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 482
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +++ S D
Sbjct: 483 I---VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 539
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 540 TILIWDF 546
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 244 (91.0 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 64/230 (27%), Positives = 116/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ + ++ + V ++ E I+ GS D +RV+D NT
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 373
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++WN + TL+ H++GI C+ Y D++ +++GS
Sbjct: 432 VDFDDKYI---VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 484
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 171 (65.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
KG+ C+ Y D +++G D T+K+WD T C +IL GHT +V +C + R+II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
T S D T+ +W+ T + NTL E V + + G
Sbjct: 358 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 394
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W+
Sbjct: 397 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 453 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT---------CVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD C++ L H+ V + F
Sbjct: 509 VRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 564
Query: 241 PELRIIITASEDGTILIWN 259
E +I+ ++S D TILIW+
Sbjct: 565 -EFQIV-SSSHDDTILIWD 581
Score = 161 (61.7 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + EC + GH+ V+ ++ + + T +S D T+++W+++
Sbjct: 316 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQYDERVIITGSS---DSTVRVWDVN 371
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 372 TGEMLNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +WN +T TL+ + + Y+ V G
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 293 DNGTL 297
+ T+
Sbjct: 484 SDNTI 488
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V++ +T V+
Sbjct: 404 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 462 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 518
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +++ S D
Sbjct: 519 I---VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 575
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 576 TILIWDF 582
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 244 (91.0 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 74/281 (26%), Positives = 124/281 (44%)
Query: 28 TQPWVLASLYSGTV-CIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVF 86
T+PW V C W H + + + V + V + + GS D IR++
Sbjct: 242 TRPWKEVYAERCRVECNWR-HGRCRQVVLSGHSDGVMCLQLV--RNILASGSYDATIRLW 298
Query: 87 DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHY 146
+ T V E H + L +++ S DK I++W++ + EC GH+
Sbjct: 299 NLATFQQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRTS-ECISILHGHTDS 355
Query: 147 VMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLIT 206
V+ F D S S D T+++W+ S + TL H +N + I D+ +++
Sbjct: 356 VLCLTF---DSTLLVSGSADCTVKLWHF-SGGKRITLRGHTGPVNSVR--IIRDRGLVLS 409
Query: 207 GSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQ 266
GSDD T+K+W ET TC+ H V ++ + R+ + S DGTI W+ +
Sbjct: 410 GSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL-ADSRLF-SCSLDGTIKQWDIEKKKCV 467
Query: 267 NTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
+TL +E VW I ++ G +G +VK+ + C
Sbjct: 468 HTLFGHIEGVWEIA--ADHLRLISGAHDG--VVKVWEACEC 504
Score = 231 (86.4 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 71/223 (31%), Positives = 108/223 (48%)
Query: 40 TVCIWNYHSQTTEKSVKV----TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVK 95
T+ IWNY T + + + TDS V F + +V GS D ++++ ++ +
Sbjct: 334 TIRIWNYR---TSECISILHGHTDS-VLCLTFDST--LLVSGSADCTVKLWHFSGGKRIT 387
Query: 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
H + S+ + VL+ SDD IK+W E N C TF H V A
Sbjct: 388 -LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETN-TCLHTFSAHIGPVQSLAL--A 443
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D F S SLDGTI+ W+++ TL H +G+ + I +D + LI+G+ D VKV
Sbjct: 444 DSRLF-SCSLDGTIKQWDIEKKKCVHTLFGHIEGV----WEIAADHLRLISGAHDGVVKV 498
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
W E CV L+ H+ VT+V + ++ + SEDG I +W
Sbjct: 499 W--EACECVHTLKNHSEPVTSVALG-DCEVV-SGSEDGKIYLW 537
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 241 (89.9 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 65/230 (28%), Positives = 115/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L ++ IW+ S K + V ++ E IV GS D +RV+D NT
Sbjct: 204 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 261
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 262 EVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 319
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 320 VDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 372
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 373 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 420
Score = 178 (67.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 252 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASATDITL 306
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 307 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 363
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 364 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 418
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 419 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 469
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y DK+ I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 190 NSKGVYCLQY--DDDKI--ISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERV 243
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 244 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 282
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 204 IISGLRDNSIKIWD-KSSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 259
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 260 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 315
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 316 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 371
Query: 293 DNGTL 297
+ T+
Sbjct: 372 SDNTI 376
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 292 SIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 349
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 350 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 406
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 407 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 463
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 464 TILIWDF 470
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 246 (91.7 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 70/244 (28%), Positives = 113/244 (46%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAV--HP-TFPFVLTASDDKLIKLWDW 130
I+ GS DK ++D S+ + H I +A+ P T F +TASDD+ IKLW
Sbjct: 439 IISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAITASDDRTIKLWKG 498
Query: 131 ---------------EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+K + T H + + P D FA+AS D +++WN++
Sbjct: 499 FSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPND-KIFATASQDSYVKLWNVN 557
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ ++ AH +G+ ++ F D+ +L T S D T+K+W TC++ LEGH +V
Sbjct: 558 NLEPITSIKAHRRGVWHVE-FSPIDQCFL-TCSADGTIKIWSLSDYTCLKTLEGHKGSVL 615
Query: 236 AVCFHP-ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
F ++I+ ASE G I +WN T NT ++W++ K + G +
Sbjct: 616 KASFISFGMQIVSVASE-GLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSD 674
Query: 295 GTLI 298
LI
Sbjct: 675 SKLI 678
Score = 215 (80.7 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 56/186 (30%), Positives = 88/186 (47%)
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
G DD + D ASV + AHE I S+++ P TAS D +KLW+ N E
Sbjct: 506 GGDDS--KKKDKKISASVTKI-AHEKDINSISIAPNDKIFATASQDSYVKLWN-VNNLEP 561
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ + H V F+P D F + S DGTI+IW++ TL+ H KG F
Sbjct: 562 ITSIKAHRRGVWHVEFSPID-QCFLTCSADGTIKIWSLSDYTCLKTLEGH-KGSVLKASF 619
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
I S + +++ + + +K+W+ +T C+ EGH + + A+ + IT D ++
Sbjct: 620 I-SFGMQIVSVASEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSDSKLI 678
Query: 257 IWNATT 262
W T
Sbjct: 679 AWKDHT 684
Score = 189 (71.6 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 71/286 (24%), Positives = 125/286 (43%)
Query: 46 YHSQTTEKSVKVT--DSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDY 103
Y+ +T E+ ++ + + K++ ++ IV + ++ I+ +D NT + + HED
Sbjct: 369 YNGKTLERQGEIIGYNDEIIDIKYINDDNIIVATNSNE-IKTYDLNTKRA-QVLRGHEDL 426
Query: 104 IRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT--FA 161
+ S+ V +++ S DK +WD EK Q GH+ + A PK +T FA
Sbjct: 427 VMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQ-LTGHTGVISCVAL-PKKPSTSMFA 484
Query: 162 -SASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT---------------SDKVYLI 205
+AS D TI++W S+ + D +K I +T +DK++
Sbjct: 485 ITASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFA- 543
Query: 206 TGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL 265
T S D VK+W+ + ++ H V V F P + +T S DGTI IW+ + +
Sbjct: 544 TASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTC 603
Query: 266 QNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
TL V + Q+ G ++K+ N + +N
Sbjct: 604 LKTLEGHKGSVLKASFISFGMQIVSVASEG--LIKLWNIKTNECLN 647
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 39/156 (25%), Positives = 75/156 (48%)
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT 137
S D ++++++ N + + +AH + + P LT S D IK+W ++ C
Sbjct: 546 SQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLS-DYTCL 604
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
+T EGH V++++F + + AS +G I++WN+ ++ T + HE I + +
Sbjct: 605 KTLEGHKGSVLKASFISFGMQIVSVAS-EGLIKLWNIKTNECLNTFEGHESKIWALS--V 661
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNN 233
D+ ITG D + W T+ ++I + N
Sbjct: 662 AKDQERFITGGSDSKLIAWKDHTEIELEIQKKKEEN 697
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/164 (27%), Positives = 76/164 (46%)
Query: 58 TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117
+D+ + T I+ G + I+ + + VK ++ HE I + +H + V
Sbjct: 86 SDTKISTFALSPNNEEILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVA 145
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
+AS DK +K+WD EK + CT F+ H V F+P L + LD I+++++ +
Sbjct: 146 SASSDKTVKVWDLEKGY-CTHNFQ-HDDVVTMLKFHPTLLK-LVTVCLDLNIRVYDLVTK 202
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK 221
L H I+ I F S K + +G D + VWD +K
Sbjct: 203 ECVI-LTNHLSQISGIT-FSNSGKELISSGRDK-VLNVWDMLSK 243
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/187 (21%), Positives = 85/187 (45%)
Query: 83 IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEG 142
I++ D + + E+ + I + A+ P +L + IK + E + ++G
Sbjct: 70 IKIIDTEHGTVISKIES-DTKISTFALSPNNEEILIGCSNLQIKQYRIEDQ-SLVKIWKG 127
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
H + + + N ASAS D T+++W+++ H+ + + + T K
Sbjct: 128 HEGPINEIDIHSSG-NIVASASSDKTVKVWDLEKGYCTHNFQ-HDDVVTMLKFHPTLLK- 184
Query: 203 YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
L+T D ++V+D TK CV IL H + ++ + F + +I++ D + +W+ +
Sbjct: 185 -LVTVCLDLNIRVYDLVTKECV-ILTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLS 242
Query: 263 FRLQNTL 269
+ T+
Sbjct: 243 KNPKKTI 249
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 251 (93.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+KS F +LA+ V +++ +SQ + V ++IV GSD
Sbjct: 1701 IKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSD 1760
Query: 80 DKFIRVFDYNTMASVKEFEAHED-YIRSLAVHPTFPFVLTASDDKLIKLWDWEKN--WEC 136
D +V+ + F D + LA PT P + + D ++L+D N +
Sbjct: 1761 DATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYRE 1820
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHEKGINCIDY 195
GH+ + F+P N AS S D I++WN+ + A++T++ AH INCI +
Sbjct: 1821 VAKLHGHTRAITSITFSPSG-NLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISF 1879
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTI 255
T++ LI+ SDD++ KVW T + EG TN + + P+ + I T S D +I
Sbjct: 1880 NPTNE-CELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSI 1938
Query: 256 LIWNATTFRL 265
++ ++ +L
Sbjct: 1939 AVYLCSSKKL 1948
Score = 228 (85.3 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 65/241 (26%), Positives = 116/241 (48%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR---TAKFVAREHWIVCGSDDK 81
F PTQP + TV +++ S T + V R + F + I S+D
Sbjct: 1791 FSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDL 1850
Query: 82 FIRVFDYNTMASVKEFE-AHEDYIRSLAVHPTFPF-VLTASDDKLIKLWDWEKNWECTQT 139
I+V++ T + E AH D I ++ +PT +++ SDD K+W T +
Sbjct: 1851 LIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWS-RFTTSTTLS 1909
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
EG ++ + ++P D A+ S D +I ++ S F L H +N + S
Sbjct: 1910 TEGSTNTIKHCVYSP-DGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDS 1968
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K L++G DF ++VW+ +T+ + L+GH++++ F + + II+AS DG++ +W+
Sbjct: 1969 KK--LVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWD 2026
Query: 260 A 260
A
Sbjct: 2027 A 2027
Score = 186 (70.5 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 56/241 (23%), Positives = 101/241 (41%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV-KVTDSPVRTAKF-VAREHWIVCG 77
+ S+ F P+ + ++ + +WN + E ++ K + P+ F E ++
Sbjct: 1831 ITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISC 1890
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT 137
SDD +V+ T ++ E + I+ P ++ T S D I ++ +
Sbjct: 1891 SDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSK-KLL 1949
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
+GH+ +V F+P D S D +++WN+ + L H I F
Sbjct: 1950 FRLKGHTDWVNFCTFSP-DSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIE--KAFF 2006
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
T D+ Y+I+ S D +VKVWD + + + L T V I ++S+DG I
Sbjct: 2007 TKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSSDASGRIFSSSDDGIIKS 2066
Query: 258 W 258
W
Sbjct: 2067 W 2067
Score = 176 (67.0 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 52/194 (26%), Positives = 96/194 (49%)
Query: 74 IVCGSDDKFIRVFDY--NTM-ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
+ G+ D +R+FD NT+ V + H I S+ P+ + + S+D LIK+W+
Sbjct: 1798 LAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNV 1857
Query: 131 EKNWECTQTFE-GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
+ + + T E H+ + +FNP + S S D + ++W+ +++ TL E
Sbjct: 1858 QTH-KAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTST--TLST-EGS 1913
Query: 190 INCIDYFITS-DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
N I + + S D Y+ T S D ++ V+ +K + L+GHT+ V F P+ + +++
Sbjct: 1914 TNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVS 1973
Query: 249 ASEDGTILIWNATT 262
D + +WN T
Sbjct: 1974 GGWDFNLRVWNIKT 1987
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/238 (23%), Positives = 107/238 (44%)
Query: 6 ELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSG-TVCIWNYHSQTTEKSVKVTDSPVRT 64
E IEK +D + + F+PT L S + +W+ + +T S + + + ++
Sbjct: 1863 EYTIEKAH---NDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKH 1919
Query: 65 AKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
+ +I S D I V+ ++ + + H D++ P +++ D
Sbjct: 1920 CVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFN 1979
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
+++W+ + E +GHS + + AF KD SAS DG++++W+ + + T
Sbjct: 1980 LRVWNIKTQKELL-CLKGHSSSI-EKAFFTKDQKYIISASFDGSVKVWDAQFGS-EITSL 2036
Query: 185 AHEKGINCIDYFITSDKV-YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
H+ I+ D +SD + + SDD +K W +C+ L GH+ + V F+P
Sbjct: 2037 RHQTRIS--DVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNP 2092
Score = 158 (60.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 64/271 (23%), Positives = 118/271 (43%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASL-YSGTVCIWNYHSQTTEKSVKVTDS-PVRTAKFVA 69
+F S V +F PT +L S + ++ I+N + ++ + S PV + +
Sbjct: 1601 QFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSP 1660
Query: 70 REHWIVCGSDDKFIRVFD-YNTMAS--VKE-FEAHEDY--IRSLAVHPTFPFVLTASDDK 123
I S D I++++ ++T+A +K +A Y I+S +L +
Sbjct: 1661 DGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKN 1720
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN--MDSSAAKF 181
+ L+D + HS V + + D N + S D T ++W+ + + F
Sbjct: 1721 DVLLFDVNSQ-KLISVMGNHSKSVNHCSLS-NDGNYIVTGSDDATAKVWSSTLGTQLTNF 1778
Query: 182 TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC---VQILEGHTNNVTAVC 238
+ + NC+ + T L G+ D TV+++D + T V L GHT +T++
Sbjct: 1779 LIPG-DCWANCLAFSPTQP--LLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSIT 1835
Query: 239 FHPELRIIITASEDGTILIWNATTFRLQNTL 269
F P +I + SED I +WN T + + T+
Sbjct: 1836 FSPSGNLIASTSEDLLIKVWNVQTHKAEYTI 1866
Score = 149 (57.5 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 50/203 (24%), Positives = 97/203 (47%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+ +A D +I ++ E T GHS+++ +F+ D T AS+S D T+ +W++
Sbjct: 1537 IASAGKDSIIHIFKASNGSELL-TLVGHSNWISCFSFSD-DGKTLASSSWDNTVIVWDLI 1594
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQ-ILEGHTNNV 234
H + +N ++ T++ + L++ + D ++ +++ K + H+ V
Sbjct: 1595 VGNQIHQFKDHSRAVNYCEFSPTANNL-LMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPV 1653
Query: 235 TAVCFHPELRIIITASEDGTILIWNA-TTF---RLQNTLSSGLE--RVWSIGYKKGSNQV 288
+ C+ P+ +I ++S DGTI IWN T RL++ + + L + S + S Q+
Sbjct: 1654 NSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQI 1713
Query: 289 -AFGCDNGTLIVKIGNSSGCDSV 310
A N L+ + NS SV
Sbjct: 1714 LATTMKNDVLLFDV-NSQKLISV 1735
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 47/239 (19%), Positives = 104/239 (43%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
I D I +F + + + H ++I + + ++S D + +WD
Sbjct: 1537 IASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVG 1596
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM-DSSAAKFTLDAHEKGINC 192
+ Q F+ HS V F+P N S + D +I I+N D + + AH K +N
Sbjct: 1597 NQIHQ-FKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNS 1655
Query: 193 IDYFITSDKVYLITGSDDFTVKVWD-YET--KTCVQ-ILEGHTN--NVTAVCFHPELRII 246
+ + D + + S D T+K+W+ ++T K ++ +++ + ++ + F + I
Sbjct: 1656 CCW--SPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQI 1713
Query: 247 ITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305
+ + +L+++ + +L + + + + V N + G D+ T K+ +S+
Sbjct: 1714 LATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDAT--AKVWSST 1770
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 65/231 (28%), Positives = 118/231 (51%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYNT 90
+++ L ++ IW+ +T+ + +KV + + E IV GS D +RV+D NT
Sbjct: 221 IISGLRDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT 277
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVM 148
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 278 GEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 335
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 336 VVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGS 388
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 389 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 437
Score = 178 (67.7 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 269 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASATDITL 323
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 324 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 380
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 381 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 435
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 436 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 486
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 221 IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 276
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 277 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 333 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 388
Query: 293 DNGTL 297
+ T+
Sbjct: 389 SDNTI 393
Score = 162 (62.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 207 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 260
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 299
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 309 SIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 366
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 367 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 423
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 424 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 480
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 481 TILIWDF 487
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 65/231 (28%), Positives = 118/231 (51%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYNT 90
+++ L ++ IW+ +T+ + +KV + + E IV GS D +RV+D NT
Sbjct: 221 IISGLRDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT 277
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVM 148
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 278 GEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 335
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 336 VVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGS 388
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 389 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 437
Score = 178 (67.7 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 269 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASATDITL 323
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 324 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 380
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 381 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 435
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 436 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 486
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 221 IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 276
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 277 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 333 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 388
Query: 293 DNGTL 297
+ T+
Sbjct: 389 SDNTI 393
Score = 162 (62.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 207 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 260
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 299
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 309 SIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 366
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 367 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 423
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 424 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 480
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 481 TILIWDF 487
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 67/267 (25%), Positives = 120/267 (44%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GHS V
Sbjct: 130 EGNVRVSRELPGHTGYL-SCCRFLDDGQIITSSGDTTCALWDIETGQQTT-TFTGHSGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + +P DL TF S + D + ++W++ + + H IN + +F S + TG
Sbjct: 188 MSLSLSP-DLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFF-PSGYAFA-TG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + +L H N +T+V F R+++ +D +W+A
Sbjct: 245 SDDATCRLFDLRADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGG 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RSGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 183 (69.5 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 60/223 (26%), Positives = 103/223 (46%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y+ +T E +V+V+ + P T +F+ + I+ S D ++D T F
Sbjct: 124 YNLKTREGNVRVSRELPGHTGYLSCCRFLD-DGQIITSSGDTTCALWDIETGQQTTTFTG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P ++ + D KLWD ++ C Q+F GH + +F P
Sbjct: 183 HSGDVMSLSLSPDLKTFVSGACDASSKLWDI-RDGMCRQSFTGHISDINAVSFFPSGY-A 240
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYLITGSDDFTVKVW 216
FA+ S D T +++++ + + L +H+ GI + F S ++ L+ G DDF VW
Sbjct: 241 FATGSDDATCRLFDLRADQ-ELLLYSHDNIICGITSVA-FSKSGRL-LLAGYDDFNCSVW 297
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D +L GH N V+ + + + T S D + IWN
Sbjct: 298 DALKGGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 148 (57.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 45/204 (22%), Positives = 86/204 (42%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T + ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH+ Y+ F D ++S D T +W+++
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRF--LDDGQIITSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ T H + + ++ D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQTTTFTGHSGDVMSLS--LSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 231 AVSFFPSGYAFATGSDDATCRLFD 254
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/185 (22%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKMHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D +IT S D T +WD ET GH+
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFL---DDGQIITSSGDTTCALWDIETGQQTTTFTGHS 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+L+ ++ + D + +W+ + + + + + ++ + A G
Sbjct: 185 GDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 243 (90.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 79/305 (25%), Positives = 131/305 (42%)
Query: 2 ETPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP 61
+T + + + F D + DF P V + V +WN+ Q
Sbjct: 32 QTTHDPALSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGA 91
Query: 62 VRTAKFVAREHWIV-CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
V K+ I CG D + IR++ + +AH IRS++ ++L++S
Sbjct: 92 VYCVKYSPDGETIASCGQDRQ-IRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSS 150
Query: 121 DDKLIKLWDWE-KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW--NMDSS 177
DDK +KLW + K + C+ F GH ++V +P D+ AS S D T+ +W N
Sbjct: 151 DDKTLKLWRLQDKKFMCS--FAGHKNWVRSGVISP-DMRLVASGSDDKTVMLWDLNFQKI 207
Query: 178 AAKF-TLDAHEK--GINCI-DYFITSDKVY-------LITGSDDFTVKVWDYETKTCVQI 226
+K+ TLD + K IN D+ T +V LI+ S D +K+ D + +Q
Sbjct: 208 VSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQH 267
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
H V ++ HP + +A D I IW+ R TL S + + ++ + + +
Sbjct: 268 YNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGD 327
Query: 287 QVAFG 291
A G
Sbjct: 328 YFATG 332
Score = 195 (73.7 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 62/272 (22%), Positives = 115/272 (42%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F+ V V + P + + + +W Q+ +K +R+ F A
Sbjct: 84 KFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADG 143
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD-- 129
+++ SDDK ++++ + F H++++RS + P V + SDDK + LWD
Sbjct: 144 GYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLN 203
Query: 130 WEK----------NWECTQ--TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
++K N + +Q ++ H V Q F+P D S+S D I+I ++ S+
Sbjct: 204 FQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHP-DGTCLISSSFDHKIKITDIRSN 262
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
+AH+ +N I T +L + D +K+WD + L + ++T V
Sbjct: 263 KLIQHYNAHDAQVNSISIHPTG--YFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTV 320
Query: 238 CFHPELRIIITASEDGTILIWNATTF--RLQN 267
F+ T ++W T F +QN
Sbjct: 321 QFNQSGDYFATGGSQNLCMVWK-TNFDQNIQN 351
Score = 143 (55.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 33/163 (20%), Positives = 73/163 (44%)
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+++F GH + + F+PK + AS S D + +WN F H+ + C+ Y
Sbjct: 40 SRSFRGHEDIITCADFDPK-MRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKY- 97
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+ D + + D +++W ++ I++ H + ++ F + ++++S+D T+
Sbjct: 98 -SPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLK 156
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+W + + + V S VA G D+ T+++
Sbjct: 157 LWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVML 199
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 65/231 (28%), Positives = 118/231 (51%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYNT 90
+++ L ++ IW+ +T+ + +KV + + E IV GS D +RV+D NT
Sbjct: 226 IISGLRDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT 282
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVM 148
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 283 GEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 340
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 341 VVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGS 393
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 394 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 442
Score = 176 (67.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 274 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASPTDITL 328
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 329 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 385
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 386 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 440
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 441 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 491
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 226 IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 281
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 282 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 337
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 338 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 393
Query: 293 DNGTL 297
+ T+
Sbjct: 394 SDNTI 398
Score = 162 (62.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 212 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 265
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 266 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 304
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 314 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 371
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 372 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 428
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 429 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 485
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 486 TILIWDF 492
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 241 (89.9 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 65/230 (28%), Positives = 115/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L ++ IW+ S K + V ++ E IV GS D +RV+D NT
Sbjct: 238 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 295
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 296 EVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 353
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 354 VDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 406
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 407 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 454
Score = 178 (67.7 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 286 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASATDITL 340
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 341 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 397
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 398 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 452
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 453 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 503
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y DK+ I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 224 NSKGVYCLQY--DDDKI--ISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERV 277
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 278 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 316
Score = 164 (62.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 238 IISGLRDNSIKIWD-KSSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 293
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 294 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 349
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 350 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 405
Query: 293 DNGTL 297
+ T+
Sbjct: 406 SDNTI 410
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 326 SIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 383
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 384 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 440
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 441 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 497
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 498 TILIWDF 504
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 241 (89.9 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 65/231 (28%), Positives = 118/231 (51%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYNT 90
+++ L ++ IW+ +T+ + +KV + + E IV GS D +RV+D NT
Sbjct: 240 IISGLRDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT 296
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVM 148
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 297 GEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 354
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 355 VVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGS 407
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 408 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 456
Score = 178 (67.7 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 288 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASATDITL 342
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 343 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 399
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 400 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 454
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 455 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 505
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 240 IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 295
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 296 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 351
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 352 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 407
Query: 293 DNGTL 297
+ T+
Sbjct: 408 SDNTI 412
Score = 162 (62.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 226 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 279
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 280 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 318
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 328 SIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 385
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 386 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 442
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 443 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 499
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 500 TILIWDF 506
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 241 (89.9 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 65/231 (28%), Positives = 118/231 (51%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYNT 90
+++ L ++ IW+ +T+ + +KV + + E IV GS D +RV+D NT
Sbjct: 241 IISGLRDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT 297
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVM 148
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 298 GEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 355
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 356 VVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGS 408
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 409 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 457
Score = 178 (67.7 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 289 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASATDITL 343
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 344 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 400
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 401 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 455
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 456 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 506
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 241 IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 296
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 297 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 352
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 353 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 408
Query: 293 DNGTL 297
+ T+
Sbjct: 409 SDNTI 413
Score = 162 (62.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 227 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 280
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 281 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 319
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 329 SIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 386
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 387 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 443
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 444 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 500
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 501 TILIWDF 507
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 241 (89.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 65/230 (28%), Positives = 115/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L ++ IW+ S K + V ++ E IV GS D +RV+D NT
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 310
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 311 EVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 368
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 369 VDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 421
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 422 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 469
Score = 178 (67.7 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 301 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASATDITL 355
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 356 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 412
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 413 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 467
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 468 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 518
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y DK+ I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 239 NSKGVYCLQY--DDDKI--ISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERV 292
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Score = 164 (62.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 253 IISGLRDNSIKIWD-KSSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 308
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 309 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 365 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 420
Query: 293 DNGTL 297
+ T+
Sbjct: 421 SDNTI 425
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 341 SIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 398
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 399 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 455
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 456 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 512
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 513 TILIWDF 519
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 241 (89.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 65/231 (28%), Positives = 118/231 (51%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYNT 90
+++ L ++ IW+ +T+ + +KV + + E IV GS D +RV+D NT
Sbjct: 253 IISGLRDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT 309
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVM 148
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 310 GEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 367
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 368 VVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGS 420
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 421 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 469
Score = 178 (67.7 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 301 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASATDITL 355
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 356 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 412
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 413 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 467
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 468 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 518
Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 253 IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 308
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 309 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 365 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 420
Query: 293 DNGTL 297
+ T+
Sbjct: 421 SDNTI 425
Score = 162 (62.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 239 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 292
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 341 SIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 398
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 399 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 455
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 456 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 512
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 513 TILIWDF 519
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 241 (89.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 65/231 (28%), Positives = 118/231 (51%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYNT 90
+++ L ++ IW+ +T+ + +KV + + E IV GS D +RV+D NT
Sbjct: 253 IISGLRDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT 309
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVM 148
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 310 GEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 367
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 368 VVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGS 420
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 421 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 469
Score = 178 (67.7 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ ++ ++ + V +F + + C S D+ I V+D MAS +
Sbjct: 301 TVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTC-SKDRSIAVWD---MASATDITL 355
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 356 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 412
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 413 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 467
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 468 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 518
Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + + EC + GH+ V+ + D + S D T+++W+++
Sbjct: 253 IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 308
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 309 TGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 365 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 420
Query: 293 DNGTL 297
+ T+
Sbjct: 421 SDNTI 425
Score = 162 (62.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 239 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 292
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 341 SIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 398
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 399 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 455
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 456 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 512
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 513 TILIWDF 519
>UNIPROTKB|H0Y8P4 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
OMA:QFEGHTK EMBL:AC010279 HGNC:HGNC:25758 ChiTaRS:UTP15
Ensembl:ENST00000509005 Uniprot:H0Y8P4
Length = 545
Score = 241 (89.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 77/304 (25%), Positives = 142/304 (46%)
Query: 1 METPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS 60
+ETP+++ KEF V VDF P P+ A S + I+ +SQ K+
Sbjct: 56 VETPVQI---KEF----GAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKD 108
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
A F +V GS+D +++FD + A +++FE H + ++ V++ +
Sbjct: 109 TAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGA 168
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVM---QSAFNPKDLNTFASASLDGTIQIWNMDSS 177
DD +KLWD + E TF+ HS YV S NP DL F + S D T+++++ +S
Sbjct: 169 DDYTVKLWDIPNSKEIL-TFKEHSDYVRCGCASKLNP-DL--FITGSYDHTVKMFDARTS 224
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTCVQILEGHTNNVTA 236
+ +++ H + + + F + L+ + VKVWD + + L+ H VT
Sbjct: 225 ESVLSVE-HGQPVESVLLFPSGG---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTC 280
Query: 237 VCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGT 296
+C + +++ S D + +++ T++++ ++ + S+ + G NG
Sbjct: 281 LCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAAS-ILSLALAHEDETIVVGMTNGI 339
Query: 297 LIVK 300
L VK
Sbjct: 340 LSVK 343
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 243 (90.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 70/251 (27%), Positives = 118/251 (47%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + S V S+ + +LA+ G C IW S+ S V +F
Sbjct: 14 QEIVAHSSNVSSLVLGKSSGRLLAT--GGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQF 71
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
+ E +V GS +R++D ++ H+ I SL HP ++ + S D IKL
Sbjct: 72 NSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKL 131
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C ++GH+ V AF+P D ASAS D T+++W++ + +H
Sbjct: 132 WDVRRKG-CVFRYKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWDLIAGKMITEFTSHT 189
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+N + + ++ L +GS D TVK+WD E + EG T V +V F+P+ +
Sbjct: 190 SAVNVVQFH--PNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLY 247
Query: 248 TASEDGTILIW 258
+ SE+ T+ ++
Sbjct: 248 SGSEN-TLRVY 257
Score = 219 (82.2 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 54/209 (25%), Positives = 101/209 (48%)
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
T ++E AH + SL + + +L T +D + +W K C + GH+ V
Sbjct: 9 TSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKP-NCIMSLTGHTSAVG 67
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
FN + A SL G++++W+++++ TL H+ I+ +D+ + YL +GS
Sbjct: 68 CIQFNSSEERVVAG-SLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGE--YLASGS 124
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268
D +K+WD K CV +GHT V + F P+ + + +AS+D T+ +W+ ++
Sbjct: 125 VDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITE 184
Query: 269 LSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
+S V + + +A G + T+
Sbjct: 185 FTSHTSAVNVVQFHPNEYLLASGSADRTV 213
Score = 201 (75.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 52/226 (23%), Positives = 98/226 (43%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G +D + ++ + + H + + + + V+ S ++LWD E
Sbjct: 36 LATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAA 95
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P AS S+D I++W++ F H + + C+
Sbjct: 96 -KILRTLMGHKASISSLDFHPMG-EYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCL 153
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D +L + SDD TVK+WD + HT+ V V FHP ++ + S D
Sbjct: 154 AF--SPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADR 211
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
T+ +W+ F + + V S+ + + + G +N TL V
Sbjct: 212 TVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRV 256
Score = 191 (72.3 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 55/241 (22%), Positives = 110/241 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V + F+ ++ V+A SG++ +W+ + +++ + + + F ++ GS
Sbjct: 66 VGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSV 125
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D V ++ H +R LA P ++ +ASDD +KLWD T+
Sbjct: 126 DSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITE- 184
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI--DYFI 197
F H+ V F+P + AS S D T+++W+++ KF + +G +
Sbjct: 185 FTSHTSAVNVVQFHPNEY-LLASGSADRTVKLWDLE----KFNMIGSSEGETGVVRSVLF 239
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
D L +GS++ T++V+ +E C ++ V+ + I ++ S T +
Sbjct: 240 NPDGSCLYSGSEN-TLRVYGWEPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSH--TNVS 296
Query: 258 W 258
W
Sbjct: 297 W 297
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 67/267 (25%), Positives = 120/267 (44%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GHS V
Sbjct: 130 EGNVRVSRELPGHTGYL-SCCRFLDDGQIITSSGDTTCALWDIETGQQTT-TFTGHSGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + +P DL TF S + D + ++W++ + + H IN + +F S + TG
Sbjct: 188 MSLSLSP-DLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFF-PSGYAFA-TG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + +L H N +T+V F R+++ +D +W+A
Sbjct: 245 SDDATCRLFDLRADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGG 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 185 (70.2 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 60/223 (26%), Positives = 103/223 (46%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y+ +T E +V+V+ + P T +F+ + I+ S D ++D T F
Sbjct: 124 YNLKTREGNVRVSRELPGHTGYLSCCRFLD-DGQIITSSGDTTCALWDIETGQQTTTFTG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P ++ + D KLWD ++ C Q+F GH + +F P
Sbjct: 183 HSGDVMSLSLSPDLKTFVSGACDASSKLWDI-RDGMCRQSFTGHISDINAVSFFPSGY-A 240
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYLITGSDDFTVKVW 216
FA+ S D T +++++ + + L +H+ GI + F S ++ L+ G DDF VW
Sbjct: 241 FATGSDDATCRLFDLRADQ-ELLLYSHDNIICGITSVA-FSKSGRL-LLAGYDDFNCSVW 297
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D +L GH N V+ + + + T S D + IWN
Sbjct: 298 DALKGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 148 (57.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 45/204 (22%), Positives = 86/204 (42%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T + ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH+ Y+ F D ++S D T +W+++
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRF--LDDGQIITSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ T H + + ++ D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQTTTFTGHSGDVMSLS--LSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 231 AVSFFPSGYAFATGSDDATCRLFD 254
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/185 (22%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKMHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D +IT S D T +WD ET GH+
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFL---DDGQIITSSGDTTCALWDIETGQQTTTFTGHS 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+L+ ++ + D + +W+ + + + + + ++ + A G
Sbjct: 185 GDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 237 (88.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 68/232 (29%), Positives = 102/232 (43%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ GS DK +++ T F H I LA +P V T S D KLWD E
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESG 209
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
E + T GH ++ FN + + S D T +W++ S L H I+C+
Sbjct: 210 EEVS-TLAGHFAEIISLCFNTTG-DRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCV 267
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ D + T S D + KVWD E C+ L GH + V VCF+ ++I TAS DG
Sbjct: 268 QF--NWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADG 325
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYK-KGSNQVAFGCDNGTLI--VKIG 302
T +++ TF+ L + + + +GS + D + + VK G
Sbjct: 326 TSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTG 377
Score = 233 (87.1 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 65/235 (27%), Positives = 108/235 (45%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIR 84
F+P V T +W+ S ++ + + + F +V GS D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAI 244
Query: 85 VFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHS 144
++D + V H I + + + TAS DK K+WD E +C T GH+
Sbjct: 245 LWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGG-QCLATLLGHN 303
Query: 145 HYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYL 204
V+ FN A+AS DGT ++++ D+ L+ H+ I+ + + +V
Sbjct: 304 DEVLDVCFNYTG-QLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRV-- 360
Query: 205 ITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+T S D T +VW +T C+Q+LEGH++ + + F+ E IIT S+D T IW+
Sbjct: 361 LTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 219 (82.2 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 56/210 (26%), Positives = 98/210 (46%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
P+ T+ V + ++C +K + D + +AH + ++A + + +T S
Sbjct: 53 PLITSSCVEQVKLLICKLQEK-VGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGS 111
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D+ K+WD E T EGH + V AFN + A+ S D T ++W+ ++
Sbjct: 112 YDRTCKIWDTASGEEL-HTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCF 170
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
+T H I C+ + + TGS D T K+WD E+ V L GH + ++CF+
Sbjct: 171 YTFRGHTAEIVCLAF--NPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFN 228
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLS 270
++T S D T ++W+ + R + LS
Sbjct: 229 TTGDRLVTGSFDHTAILWDVPSGRKVHVLS 258
Score = 193 (73.0 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 56/223 (25%), Positives = 95/223 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ GS D +++D + V H I SL + T ++T S D LWD
Sbjct: 192 VATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSG 251
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ GH + FN D + A+ASLD + ++W+ + TL H + +
Sbjct: 252 RK-VHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDV 309
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ T + T S D T +V+ +T C+ LEGH ++ VCF+ + ++TAS D
Sbjct: 310 CFNYTGQLI--ATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDK 367
Query: 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGT 296
T +W T L + ++S + + + G + T
Sbjct: 368 TSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNT 410
Score = 177 (67.4 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 46/170 (27%), Positives = 78/170 (45%)
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
E+ + + + H + AFN K + F + S D T +IW+ S TL+ H +
Sbjct: 79 ERKFYLFRALQAHILPLTNVAFN-KSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVV 137
Query: 191 NCIDYFIT-SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
I + DKV TGS D T K+W ET C GHT + + F+P+ ++ T
Sbjct: 138 YAIAFNNPYGDKV--ATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATG 195
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
S D T +W+ + +TL+ + S+ + +++ G + T I+
Sbjct: 196 SMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAIL 245
>MGI|MGI:2145443 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2145443
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
ChiTaRS:UTP15 EMBL:AY151261 EMBL:AK049186 EMBL:AK162794
EMBL:BC034372 EMBL:BC065057 IPI:IPI00226889 RefSeq:NP_849249.1
UniGene:Mm.28221 ProteinModelPortal:Q8C7V3 SMR:Q8C7V3 STRING:Q8C7V3
PhosphoSite:Q8C7V3 PaxDb:Q8C7V3 PRIDE:Q8C7V3
Ensembl:ENSMUST00000040972 GeneID:105372 KEGG:mmu:105372
UCSC:uc007rom.1 InParanoid:Q8C7V3 NextBio:357640 Bgee:Q8C7V3
Genevestigator:Q8C7V3 GermOnline:ENSMUSG00000041747 Uniprot:Q8C7V3
Length = 528
Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 77/303 (25%), Positives = 139/303 (45%)
Query: 2 ETPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP 61
+TP+++ KEF V VDF P P+ A S + I+ +SQ K+
Sbjct: 30 KTPVQI---KEF----GAVSKVDFSPQLPYNYAVTASSRIHIYGRYSQEPVKTFSRFKDT 82
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
A F +V GS+D +++FD N A +++FE H + ++ V++ +D
Sbjct: 83 AYCATFRQDGQLLVAGSEDGVVQLFDINGRAPLRQFEGHTKAVHTVDFTADNYHVVSGAD 142
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVM---QSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
D +KLWD + E TF+ HS YV S NP DL F + S D T++I++ ++
Sbjct: 143 DYTVKLWDIPNSKEIL-TFKEHSDYVRCGCASKLNP-DL--FVTGSYDHTVKIFDARTNK 198
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTCVQILEGHTNNVTAV 237
++ H + + + F + L+ + VKVWD + + L+ H VT +
Sbjct: 199 NVLCVE-HGQPVESVLLFPSGG---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCL 254
Query: 238 CFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
C + +++ S D + +++ T++++ ++ + S+ + G NG L
Sbjct: 255 CLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAAS-ILSLALSHQDETIVVGMTNGIL 313
Query: 298 IVK 300
VK
Sbjct: 314 SVK 316
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 241 (89.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 63/230 (27%), Positives = 116/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ ++ ++ + V ++ E I+ GS D +RV+D N
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAG 373
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++WN + TL+ H++GI C+ Y D++ +++GS
Sbjct: 432 VDFDDKYI---VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 484
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W+
Sbjct: 397 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 453 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT---------CVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD C++ L H+ V + F
Sbjct: 509 VRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 564
Query: 241 PELRIIITASEDGTILIWN 259
E +I+ ++S D TILIW+
Sbjct: 565 -EFQIV-SSSHDDTILIWD 581
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
KG+ C+ Y D +++G D T+K+WD T C +IL GHT +V +C + R+II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
T S D T+ +W+ + NTL E V + + G
Sbjct: 358 TGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG 394
Score = 161 (61.7 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + EC + GH+ V+ ++ + + T +S D T+++W+++
Sbjct: 316 IVSGLRDNTIKIWD-KNTLECKRILTGHTGSVLCLQYDERVIITGSS---DSTVRVWDVN 371
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 372 AGEMLNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +WN +T TL+ + + Y+ V G
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 293 DNGTL 297
+ T+
Sbjct: 484 SDNTI 488
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V++ +T V+
Sbjct: 404 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 462 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 518
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +++ S D
Sbjct: 519 I---VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 575
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 576 TILIWDF 582
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 233 (87.1 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 69/284 (24%), Positives = 125/284 (44%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83
FHP + ++ + + +WN + ++K V + + S DK +
Sbjct: 74 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 133
Query: 84 RVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFEG 142
V+D T VK + H ++ S P V T SDD +KLWD K QTF+
Sbjct: 134 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQ- 191
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
+++ V+ FN + S +D I++W++ + +T+ H + + ++S+
Sbjct: 192 NTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGS 248
Query: 203 YLITGSDDFTVKVWDYET----KTCVQILEGHTNN----VTAVCFHPELRIIITASEDGT 254
YL++ + D TV+VWD + CV+I +G+ +N + + P+ I S D
Sbjct: 249 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 308
Query: 255 ILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298
+ +W+ T+ R+ L G+ N+VAF D +I
Sbjct: 309 VYVWDTTSRRILYKLP---------GHAGSINEVAFHPDEPIII 343
Score = 211 (79.3 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 59/220 (26%), Positives = 107/220 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC-GSDDKFIRVFDYNTMASVKEFE 98
TV +W+ + K +K S V + R +VC GSDD ++++D A+++ F+
Sbjct: 132 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 191
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
+ + ++ + T +++ D IK+WD +N + T T GH+ V + + +
Sbjct: 192 -NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHADSVTGLSLSSEGSY 249
Query: 159 TFASASLDGTIQIWNMDSSAAK------FTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
++A +D T+++W++ A K F + H N + + D + GS D
Sbjct: 250 LLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 308
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
V VWD ++ + L GH ++ V FHP+ III+AS D
Sbjct: 309 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 206 (77.6 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 58/204 (28%), Positives = 92/204 (45%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
A + HE + HP + +A D+LI LW+ + + T +GHS VM+
Sbjct: 57 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 116
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
+N D + SAS D T+ +W+ ++ L H +N Y + TGSDD
Sbjct: 117 YNT-DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDG 174
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
TVK+WD K +Q + +T V AV F+ II+ D I +W+ +L T+
Sbjct: 175 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 233
Query: 272 GLERVWSIGYK-KGSNQVAFGCDN 294
+ V + +GS ++ DN
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDN 257
Score = 175 (66.7 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFD-YNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117
+ V KF + D+ I +++ Y + + H + L + +
Sbjct: 66 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 125
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
+AS DK + +WD E E + +GH+ +V + + S DGT+++W++
Sbjct: 126 SASTDKTVAVWDSETG-ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 184
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
AA T + + + + TSD++ I+G D +KVWD + GH ++VT +
Sbjct: 185 AAIQTFQ-NTYQVLAVTFNDTSDQI--ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 241
Query: 238 CFHPELRIIITASEDGTILIWNATTF 263
E +++ + D T+ +W+ F
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVWDVRPF 267
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 239 (89.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 63/230 (27%), Positives = 115/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ + ++ + V ++ E I+ GS D +RV+D N
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAG 274
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 275 EMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 332
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++WN + TL+ H++GI C+ Y D++ +++GS
Sbjct: 333 VDFDDKYI---VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 385
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 386 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 433
Score = 168 (64.2 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W+
Sbjct: 298 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 353
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 354 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 409
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT---------CVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD C++ L H+ V + F
Sbjct: 410 VRCIRF----DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 465
Query: 241 PELRIIITASEDGTILIWN 259
E +I+ ++S D TILIW+
Sbjct: 466 -EFQIV-SSSHDDTILIWD 482
Score = 166 (63.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
KG+ C+ Y D +++G D T+K+WD T C +IL GHT +V +C + R+II
Sbjct: 205 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 258
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
T S D T+ +W+ + NTL E V + + G
Sbjct: 259 TGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG 295
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + EC + GH+ V+ ++ + + T +S D T+++W+++
Sbjct: 217 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQYDERVIITGSS---DSTVRVWDVN 272
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 273 AGEMLNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +WN +T TL+ + + Y+ V G
Sbjct: 329 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 384
Query: 293 DNGTL 297
+ T+
Sbjct: 385 SDNTI 389
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V++ +T V+
Sbjct: 305 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 362
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 363 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 419
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +++ S D
Sbjct: 420 I---VSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 476
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 477 TILIWDF 483
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 239 (89.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 64/230 (27%), Positives = 115/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ K++ V ++ + I+ GS D +RV+D NT
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTG 280
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
V H + + L + ++T S D+ I +WD E T + GH V
Sbjct: 281 EMVNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNV 338
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++GS
Sbjct: 339 VDFDEKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 391
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D ++++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 392 DNSIRLWDIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKIKVWD 439
Score = 170 (64.9 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 54/202 (26%), Positives = 95/202 (47%)
Query: 74 IVCGSDDKFIRVFDYNTMASV---KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
+ C S D+ I V+D + + + + H + V ++++AS D+ IK+W
Sbjct: 304 VTC-SKDRSIAVWDMTSPSEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWS- 359
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
E +T GH + + +D S S D +I++W+++ A L+ HE+ +
Sbjct: 360 TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNSIRLWDIECGACLRVLEGHEELV 416
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDY--------ETKT-CVQILEGHTNNVTAVCFHP 241
CI + D +++G+ D +KVWD + T C+ L HT V + F
Sbjct: 417 RCIRF----DTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFD- 471
Query: 242 ELRIIITASEDGTILIWNATTF 263
E +I+ ++S D TILIW+ F
Sbjct: 472 EFQIV-SSSHDDTILIWDFLNF 492
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/170 (25%), Positives = 84/170 (49%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + +C +T GH+ V+ ++ K S S D T+++W+++
Sbjct: 223 IVSGLRDNTIKIWD-RTDLQCVKTLMGHTGSVLCLQYDDK---VIISGSSDSTVRVWDVN 278
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK---TCVQILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T ++L GH
Sbjct: 279 TGEMVNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRA 334
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
V V F + + I++AS D TI +W+ +T TL+ + + Y+
Sbjct: 335 AVNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 382
Score = 156 (60.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +++G D T+K+WD CV+ L GHT +V +C + ++
Sbjct: 209 NSKGVYCLQY----DDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV--LCLQYDDKV 262
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
II+ S D T+ +W+ T + NTL E V + + G
Sbjct: 263 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG 301
Score = 150 (57.9 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 48/160 (30%), Positives = 77/160 (48%)
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S D TI+IW+ TL H + C+ Y DKV +I+GS D TV+V
Sbjct: 219 DDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY---DDKV-IISGSSDSTVRV 274
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLER 275
WD T V L H V + F+ + ++T S+D +I +W+ T+ + ++ L R
Sbjct: 275 WDVNTGEMVNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMTS---PSEIT--LRR 327
Query: 276 VWSIGYKKGSNQVAFG-----CDNGTLIVKIGNSSGCDSV 310
V +G++ N V F +G +K+ ++S C+ V
Sbjct: 328 VL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFV 366
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 224 (83.9 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 51/213 (23%), Positives = 101/213 (47%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V P + W+ S GT+ IW+ + E ++ + K+ ++ SD
Sbjct: 57 VTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASD 116
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK IR++D+ SV+ + H +Y+ S+ +P +++ S D+ +++W+ + C +
Sbjct: 117 DKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDG-TCLRM 175
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
HS ++ + + D A+AS DG +IW++ S TL + + T
Sbjct: 176 LPAHSEPIISVSISA-DGTLCATASYDGMARIWDVLSGQCLKTL-VEPINVPLSNLQFTE 233
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTN 232
++ YL+ + + +++WDY V+I + H N
Sbjct: 234 NRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVN 266
Score = 206 (77.6 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 44/121 (36%), Positives = 73/121 (60%)
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
T GH V + +P A++S DGTI+IW+ + + TL H +GI+ + + T
Sbjct: 49 TLFGHEKSVTCVSVSPNK-RWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKW-AT 106
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
K YL + SDD T+++WD+E + V+ L+GHTN V+++ F+P ++++ S D T+ IW
Sbjct: 107 GSK-YLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Query: 259 N 259
N
Sbjct: 166 N 166
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 45/143 (31%), Positives = 70/143 (48%)
Query: 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVK-VWDYETKTCVQ---ILEG 229
MDS+A +F L+ H D + D+ ++ ++ K + +YE+ + L G
Sbjct: 1 MDSTAQQFPLN-H-------DLQVQKDQKGVVEEDEEQIHKRIRNYESHSGFSEYCTLFG 52
Query: 230 HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVA 289
H +VT V P R I T+S DGTI IW+A TFRL+ TL + + + GS +A
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLA 112
Query: 290 FGCDNGTLIVKIGNSSGCDSVNC 312
D+ T ++I + SV C
Sbjct: 113 SASDDKT--IRIWDFEKRCSVRC 133
Score = 45 (20.9 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 216 WD-YETKTCVQILEGHTNNVT-----AVCFHPELRIIITASEDGTILIWNATT 262
WD Y +K + E NN + A F + ++I SEDGTI I + +T
Sbjct: 273 WDCYSSKNIPKNTEALPNNDSSYPDDAESFMHDAYLLIP-SEDGTIQITDPST 324
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 245 (91.3 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 73/305 (23%), Positives = 139/305 (45%)
Query: 1 METPLELQIEKEFIQKS-DRVKS----VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV 55
+ P+ + +F++ S ++VK V + P ++ SG +WN + E +
Sbjct: 99 LNNPMNA-VTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETIL 157
Query: 56 KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115
+ DSPVR + + W++ +++ + N M +VK F+AH++ IR + PT
Sbjct: 158 QAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSPTDNK 216
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP-KDLNTFASASLDGTIQIWNM 174
T SDD +++WD+ + E + GH V ++P K L S I+ W+
Sbjct: 217 FATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDP 275
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET-KTCVQILEGHTNN 233
+ + TL AH+ + + + + +L+T S D K++D K +Q+ GH
Sbjct: 276 KTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 234 VTAVCFHPELR-IIITASEDGTILIWNATTFRLQNTLSSGLE-RVWSIGYKKGSNQVAFG 291
TAV +HP + + DG++L W+ + + E +WS+ + + + G
Sbjct: 334 ATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSG 393
Query: 292 CDNGT 296
++ T
Sbjct: 394 SNDHT 398
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K F + ++ F PT GTV IW++ E+ ++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 71 EHWIVCGSDDKF--IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ +V GS D I+ +D T S+ AH++ + + ++ ++LTAS D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHE 187
D E Q F GH A++P FAS DG++ W++ ++ AHE
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVW 216
I + + L +GS+D T K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/250 (21%), Positives = 105/250 (42%)
Query: 14 IQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
+Q D V+++ + W+L + + G V W + K + +R A F ++
Sbjct: 157 LQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV-KMFQAHKEAIREASFSPTDN 215
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL--IKLWDW 130
SDD +R++D+ + H ++ + HPT V++ S D IK WD
Sbjct: 216 KFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD- 274
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKG 189
K + T H + VM+ N N +AS D +++++ + + + H+K
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNG-NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-GHTNNVTAVCFHPELRIIIT 248
+ + + ++ GSD ++ W + V +E H + ++ +HP I+ +
Sbjct: 334 ATAVAWHPVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCS 392
Query: 249 ASEDGTILIW 258
S D T W
Sbjct: 393 GSNDHTSKFW 402
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 245 (91.3 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 73/305 (23%), Positives = 139/305 (45%)
Query: 1 METPLELQIEKEFIQKS-DRVKS----VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV 55
+ P+ + +F++ S ++VK V + P ++ SG +WN + E +
Sbjct: 95 LNNPMNA-VTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETIL 153
Query: 56 KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115
+ DSPVR + + W++ +++ + N M +VK F+AH++ IR + PT
Sbjct: 154 QAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSPTDNK 212
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP-KDLNTFASASLDGTIQIWNM 174
T SDD +++WD+ + E + GH V ++P K L S I+ W+
Sbjct: 213 FATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDP 271
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET-KTCVQILEGHTNN 233
+ + TL AH+ + + + + +L+T S D K++D K +Q+ GH
Sbjct: 272 KTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 329
Query: 234 VTAVCFHPELR-IIITASEDGTILIWNATTFRLQNTLSSGLE-RVWSIGYKKGSNQVAFG 291
TAV +HP + + DG++L W+ + + E +WS+ + + + G
Sbjct: 330 ATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSG 389
Query: 292 CDNGT 296
++ T
Sbjct: 390 SNDHT 394
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K F + ++ F PT GTV IW++ E+ ++ + V+ +
Sbjct: 192 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 251
Query: 71 EHWIVCGSDDKF--IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ +V GS D I+ +D T S+ AH++ + + ++ ++LTAS D L KL+
Sbjct: 252 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 311
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHE 187
D E Q F GH A++P FAS DG++ W++ ++ AHE
Sbjct: 312 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 371
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVW 216
I + + L +GS+D T K W
Sbjct: 372 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 398
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/250 (21%), Positives = 105/250 (42%)
Query: 14 IQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
+Q D V+++ + W+L + + G V W + K + +R A F ++
Sbjct: 153 LQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV-KMFQAHKEAIREASFSPTDN 211
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL--IKLWDW 130
SDD +R++D+ + H ++ + HPT V++ S D IK WD
Sbjct: 212 KFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD- 270
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKG 189
K + T H + VM+ N N +AS D +++++ + + + H+K
Sbjct: 271 PKTGQSLATLHAHKNTVMEVKLNLNG-NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 329
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-GHTNNVTAVCFHPELRIIIT 248
+ + + ++ GSD ++ W + V +E H + ++ +HP I+ +
Sbjct: 330 ATAVAWHPVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCS 388
Query: 249 ASEDGTILIW 258
S D T W
Sbjct: 389 GSNDHTSKFW 398
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 245 (91.3 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 73/305 (23%), Positives = 139/305 (45%)
Query: 1 METPLELQIEKEFIQKS-DRVKS----VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV 55
+ P+ + +F++ S ++VK V + P ++ SG +WN + E +
Sbjct: 99 LNNPMNA-VTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETIL 157
Query: 56 KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115
+ DSPVR + + W++ +++ + N M +VK F+AH++ IR + PT
Sbjct: 158 QAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSPTDNK 216
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP-KDLNTFASASLDGTIQIWNM 174
T SDD +++WD+ + E + GH V ++P K L S I+ W+
Sbjct: 217 FATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDP 275
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET-KTCVQILEGHTNN 233
+ + TL AH+ + + + + +L+T S D K++D K +Q+ GH
Sbjct: 276 KTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 234 VTAVCFHPELR-IIITASEDGTILIWNATTFRLQNTLSSGLE-RVWSIGYKKGSNQVAFG 291
TAV +HP + + DG++L W+ + + E +WS+ + + + G
Sbjct: 334 ATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSG 393
Query: 292 CDNGT 296
++ T
Sbjct: 394 SNDHT 398
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K F + ++ F PT GTV IW++ E+ ++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 71 EHWIVCGSDDKF--IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ +V GS D I+ +D T S+ AH++ + + ++ ++LTAS D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHE 187
D E Q F GH A++P FAS DG++ W++ ++ AHE
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVW 216
I + + L +GS+D T K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/250 (21%), Positives = 105/250 (42%)
Query: 14 IQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
+Q D V+++ + W+L + + G V W + K + +R A F ++
Sbjct: 157 LQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV-KMFQAHKEAIREASFSPTDN 215
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL--IKLWDW 130
SDD +R++D+ + H ++ + HPT V++ S D IK WD
Sbjct: 216 KFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD- 274
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKG 189
K + T H + VM+ N N +AS D +++++ + + + H+K
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNG-NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-GHTNNVTAVCFHPELRIIIT 248
+ + + ++ GSD ++ W + V +E H + ++ +HP I+ +
Sbjct: 334 ATAVAWHPVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCS 392
Query: 249 ASEDGTILIW 258
S D T W
Sbjct: 393 GSNDHTSKFW 402
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 245 (91.3 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 73/305 (23%), Positives = 139/305 (45%)
Query: 1 METPLELQIEKEFIQKS-DRVKS----VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV 55
+ P+ + +F++ S ++VK V + P ++ SG +WN + E +
Sbjct: 99 LNNPMNA-VTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETIL 157
Query: 56 KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115
+ DSPVR + + W++ +++ + N M +VK F+AH++ IR + PT
Sbjct: 158 QAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSPTDNK 216
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP-KDLNTFASASLDGTIQIWNM 174
T SDD +++WD+ + E + GH V ++P K L S I+ W+
Sbjct: 217 FATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDP 275
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET-KTCVQILEGHTNN 233
+ + TL AH+ + + + + +L+T S D K++D K +Q+ GH
Sbjct: 276 KTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 234 VTAVCFHPELR-IIITASEDGTILIWNATTFRLQNTLSSGLE-RVWSIGYKKGSNQVAFG 291
TAV +HP + + DG++L W+ + + E +WS+ + + + G
Sbjct: 334 ATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSG 393
Query: 292 CDNGT 296
++ T
Sbjct: 394 SNDHT 398
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K F + ++ F PT GTV IW++ E+ ++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 71 EHWIVCGSDDKF--IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ +V GS D I+ +D T S+ AH++ + + ++ ++LTAS D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHE 187
D E Q F GH A++P FAS DG++ W++ ++ AHE
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVW 216
I + + L +GS+D T K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/250 (21%), Positives = 105/250 (42%)
Query: 14 IQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
+Q D V+++ + W+L + + G V W + K + +R A F ++
Sbjct: 157 LQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV-KMFQAHKEAIREASFSPTDN 215
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL--IKLWDW 130
SDD +R++D+ + H ++ + HPT V++ S D IK WD
Sbjct: 216 KFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD- 274
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKG 189
K + T H + VM+ N N +AS D +++++ + + + H+K
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNG-NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-GHTNNVTAVCFHPELRIIIT 248
+ + + ++ GSD ++ W + V +E H + ++ +HP I+ +
Sbjct: 334 ATAVAWHPVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCS 392
Query: 249 ASEDGTILIW 258
S D T W
Sbjct: 393 GSNDHTSKFW 402
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 245 (91.3 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 73/305 (23%), Positives = 139/305 (45%)
Query: 1 METPLELQIEKEFIQKS-DRVKS----VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV 55
+ P+ + +F++ S ++VK V + P ++ SG +WN + E +
Sbjct: 99 LNNPMNA-VTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETIL 157
Query: 56 KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115
+ DSPVR + + W++ +++ + N M +VK F+AH++ IR + PT
Sbjct: 158 QAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSPTDNK 216
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP-KDLNTFASASLDGTIQIWNM 174
T SDD +++WD+ + E + GH V ++P K L S I+ W+
Sbjct: 217 FATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDP 275
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET-KTCVQILEGHTNN 233
+ + TL AH+ + + + + +L+T S D K++D K +Q+ GH
Sbjct: 276 KTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 234 VTAVCFHPELR-IIITASEDGTILIWNATTFRLQNTLSSGLE-RVWSIGYKKGSNQVAFG 291
TAV +HP + + DG++L W+ + + E +WS+ + + + G
Sbjct: 334 ATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSG 393
Query: 292 CDNGT 296
++ T
Sbjct: 394 SNDHT 398
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K F + ++ F PT GTV IW++ E+ ++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 71 EHWIVCGSDDKF--IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ +V GS D I+ +D T S+ AH++ + + ++ ++LTAS D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHE 187
D E Q F GH A++P FAS DG++ W++ ++ AHE
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVW 216
I + + L +GS+D T K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/250 (21%), Positives = 105/250 (42%)
Query: 14 IQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
+Q D V+++ + W+L + + G V W + K + +R A F ++
Sbjct: 157 LQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV-KMFQAHKEAIREASFSPTDN 215
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL--IKLWDW 130
SDD +R++D+ + H ++ + HPT V++ S D IK WD
Sbjct: 216 KFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD- 274
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKG 189
K + T H + VM+ N N +AS D +++++ + + + H+K
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNG-NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-GHTNNVTAVCFHPELRIIIT 248
+ + + ++ GSD ++ W + V +E H + ++ +HP I+ +
Sbjct: 334 ATAVAWHPVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCS 392
Query: 249 ASEDGTILIW 258
S D T W
Sbjct: 393 GSNDHTSKFW 402
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 245 (91.3 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 73/305 (23%), Positives = 139/305 (45%)
Query: 1 METPLELQIEKEFIQKS-DRVKS----VDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV 55
+ P+ + +F++ S ++VK V + P ++ SG +WN + E +
Sbjct: 99 LNNPMNA-VTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETIL 157
Query: 56 KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115
+ DSPVR + + W++ +++ + N M +VK F+AH++ IR + PT
Sbjct: 158 QAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSPTDNK 216
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP-KDLNTFASASLDGTIQIWNM 174
T SDD +++WD+ + E + GH V ++P K L S I+ W+
Sbjct: 217 FATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDP 275
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET-KTCVQILEGHTNN 233
+ + TL AH+ + + + + +L+T S D K++D K +Q+ GH
Sbjct: 276 KTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 234 VTAVCFHPELR-IIITASEDGTILIWNATTFRLQNTLSSGLE-RVWSIGYKKGSNQVAFG 291
TAV +HP + + DG++L W+ + + E +WS+ + + + G
Sbjct: 334 ATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSG 393
Query: 292 CDNGT 296
++ T
Sbjct: 394 SNDHT 398
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K F + ++ F PT GTV IW++ E+ ++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 71 EHWIVCGSDDKF--IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ +V GS D I+ +D T S+ AH++ + + ++ ++LTAS D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHE 187
D E Q F GH A++P FAS DG++ W++ ++ AHE
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVW 216
I + + L +GS+D T K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/250 (21%), Positives = 105/250 (42%)
Query: 14 IQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
+Q D V+++ + W+L + + G V W + K + +R A F ++
Sbjct: 157 LQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV-KMFQAHKEAIREASFSPTDN 215
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL--IKLWDW 130
SDD +R++D+ + H ++ + HPT V++ S D IK WD
Sbjct: 216 KFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD- 274
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKG 189
K + T H + VM+ N N +AS D +++++ + + + H+K
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNG-NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 333
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-GHTNNVTAVCFHPELRIIIT 248
+ + + ++ GSD ++ W + V +E H + ++ +HP I+ +
Sbjct: 334 ATAVAWHPVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCS 392
Query: 249 ASEDGTILIW 258
S D T W
Sbjct: 393 GSNDHTSKFW 402
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 240 (89.5 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 74/277 (26%), Positives = 129/277 (46%)
Query: 34 ASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVF----DYN 89
ASL S VC++ +H T++ + A+F I CG + +IR++ D
Sbjct: 310 ASLPS--VCMYTFHH---------TNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKK 358
Query: 90 TMASVKEFEAHEDYIRSLA----VH-PTF-P---FVLTASDDKLIKLWDWEKNWECTQTF 140
++ E + +R L+ V+ TF P ++L+ S+D +LW + +
Sbjct: 359 SLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALV-AY 417
Query: 141 EGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSD 200
+GH+ V AF P + FA+AS D T Q+W+ D H ++C+ + S
Sbjct: 418 KGHTGPVWDVAFGPFG-HYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNS- 475
Query: 201 KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNA 260
Y++TGS D T ++WD V++ GHT VTAV P+ + +A +G I +W+
Sbjct: 476 -AYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDI 534
Query: 261 TTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
T R T+ ++S+ + + S + G + T+
Sbjct: 535 GTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTV 571
Score = 213 (80.0 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 51/204 (25%), Positives = 91/204 (44%)
Query: 14 IQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHW 73
+ S V F P ++L+ + +W+ ++T + K PV F H+
Sbjct: 376 LSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHY 435
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
S D+ +++ + + ++ F H + + HP +VLT S DK +LWD +
Sbjct: 436 FATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRG 495
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ F GH+ V A P D +T ASA +G I +W++ + T+ H I +
Sbjct: 496 -HSVRVFNGHTQPVTAVAIAP-DGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSL 553
Query: 194 DYFITSDKVYLITGSDDFTVKVWD 217
+ + + L++G D TV+ WD
Sbjct: 554 SF--SRESTVLVSGGSDCTVRAWD 575
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 240 (89.5 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 64/235 (27%), Positives = 108/235 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + S V S+ + +LA+ G C +W+ + S+ +P+ + +
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLAT--GGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
A+E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C ++ H+ V F+P D ASA+ D T+++W++ + F H
Sbjct: 132 WDVRRKG-CIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMFEFTGHS 189
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
+N +++ + L +GS D T++ WD E V +E V + F+P+
Sbjct: 190 GPVNVVEFH--PSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPD 242
Score = 218 (81.8 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 52/192 (27%), Positives = 86/192 (44%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G DD + V+ N V H I SL + ++ S I++WD E
Sbjct: 36 LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA 95
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P + AS SLD I++W++ F +H + + C+
Sbjct: 96 -KILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCL 153
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D +L + +DD TVK+WD + GH+ V V FHP ++ + S D
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDR 211
Query: 254 TILIWNATTFRL 265
TI W+ F +
Sbjct: 212 TIRFWDLEKFHV 223
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH ++ + ++ ++ L TG DD V VW CV L GHT + ++ +
Sbjct: 18 AHSSNVSSLVLGKSTGRL-LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEE 76
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+I+ S+ G+I +W+ ++ TL + S+ + + VA G
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASG 123
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 236 (88.1 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 65/227 (28%), Positives = 104/227 (45%)
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
W + GS+D ++V+D T H +R +AV P++ + S+DK +K WD EK
Sbjct: 154 WFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEK 213
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
N + + + GH V + +P L+ A+A D I++W+M + TL H+ IN
Sbjct: 214 N-QIIRDYYGHLSGVRTVSIHPT-LDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQ 271
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ +V ++ S D TV++WD +++L H +V A HP+ + +A D
Sbjct: 272 VQCTPVDPQV--VSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTD 329
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAF-GCDNGTL 297
I W L S E+ I + V F G DNG L
Sbjct: 330 D-IRSWGLAEGSLLTNFES--EKTGIINTLSINQDDVLFAGGDNGVL 373
Score = 205 (77.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+W W+ ++ GH +V A +P D F + S D T+++W++ + K TL H
Sbjct: 124 EWHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVM 183
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
+ D ++ YL + S+D TVK WD E ++ GH + V V HP L +I T
Sbjct: 184 TVR--DVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIAT 241
Query: 249 ASEDGTILIWNATT 262
A D I +W+ T
Sbjct: 242 AGRDSVIKLWDMRT 255
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 39/172 (22%), Positives = 76/172 (44%)
Query: 20 VKSVDFHPTQ-PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS 78
V+ V P W + T+ +W+ + + ++ VR R ++ S
Sbjct: 142 VRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVS 201
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
+DK ++ +D ++++ H +R++++HPT + TA D +IKLWD
Sbjct: 202 EDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVI- 260
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
T GH + Q P D S+S D T+++W++ + L H++ +
Sbjct: 261 TLVGHKGPINQVQCTPVDPQV-VSSSTDATVRLWDVVAGKTMKVLTHHKRSV 311
Score = 162 (62.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 46/194 (23%), Positives = 81/194 (41%)
Query: 100 HEDYIRSLAVHPTF-PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H ++R +A+ P + +T S+D +K+WD + T GH V A + +
Sbjct: 138 HLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATG-KLKTTLAGHVMTVRDVAVSDRHPY 196
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
F S S D T++ W+++ + H G+ + T D + T D +K+WD
Sbjct: 197 LF-SVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLI--ATAGRDSVIKLWDM 253
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWS 278
T+ V L GH + V P ++++S D T+ +W+ + L+ V +
Sbjct: 254 RTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRA 313
Query: 279 IGYKKGSNQVAFGC 292
VA C
Sbjct: 314 TALHPKEFSVASAC 327
Score = 124 (48.7 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 50/225 (22%), Positives = 96/225 (42%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKF 67
QI +++ V++V HPT + + + +W+ ++ ++ P+ +
Sbjct: 215 QIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQC 274
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPT-FPFVLTASDDKLIK 126
+ +V S D +R++D ++K H+ +R+ A+HP F +DD I+
Sbjct: 275 TPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDD--IR 332
Query: 127 LWDWEKNWECTQTFEGHSHYVMQS-AFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDA 185
W + T FE ++ + + N D+ FA +G + ++ S +L
Sbjct: 333 SWGLAEGSLLTN-FESEKTGIINTLSINQDDV-LFAGGD-NGVLSFYDYKSGHKYQSLAT 389
Query: 186 HE-----KGINCIDYFITSDK--VYLITGSDDFTVKVWDY-ETKT 222
E +G + T DK + LITG D ++K+W ET T
Sbjct: 390 REMVGSLEGERSV-LCSTFDKTGLRLITGEADKSIKIWKQDETAT 433
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 63/230 (27%), Positives = 115/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ + ++ + V ++ E I+ GS D +RV+D N
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAG 373
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++WN + TL+ H++GI C+ Y D++ +++GS
Sbjct: 432 VDFDDKYI---VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 484
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W+
Sbjct: 397 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 453 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT---------CVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD C++ L H+ V + F
Sbjct: 509 VRCIRF----DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 564
Query: 241 PELRIIITASEDGTILIWN 259
E +I+ ++S D TILIW+
Sbjct: 565 -EFQIV-SSSHDDTILIWD 581
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
KG+ C+ Y D +++G D T+K+WD T C +IL GHT +V +C + R+II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
T S D T+ +W+ + NTL E V + + G
Sbjct: 358 TGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG 394
Score = 161 (61.7 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + EC + GH+ V+ ++ + + T +S D T+++W+++
Sbjct: 316 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQYDERVIITGSS---DSTVRVWDVN 371
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 372 AGEMLNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +WN +T TL+ + + Y+ V G
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 293 DNGTL 297
+ T+
Sbjct: 484 SDNTI 488
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V++ +T V+
Sbjct: 404 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 462 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 518
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +++ S D
Sbjct: 519 I---VSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 575
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 576 TILIWDF 582
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 63/230 (27%), Positives = 115/230 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ + ++ + V ++ E I+ GS D +RV+D N
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAG 373
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQ 149
+ H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
F+ K + SAS D TI++WN + TL+ H++GI C+ Y D++ +++GS
Sbjct: 432 VDFDDKYI---VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSGSS 484
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W+
Sbjct: 397 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 453 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT---------CVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD C++ L H+ V + F
Sbjct: 509 VRCIRF----DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 564
Query: 241 PELRIIITASEDGTILIWN 259
E +I+ ++S D TILIW+
Sbjct: 565 -EFQIV-SSSHDDTILIWD 581
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
KG+ C+ Y D +++G D T+K+WD T C +IL GHT +V +C + R+II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
T S D T+ +W+ + NTL E V + + G
Sbjct: 358 TGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG 394
Score = 161 (61.7 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 46/185 (24%), Positives = 90/185 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD + EC + GH+ V+ ++ + + T +S D T+++W+++
Sbjct: 316 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQYDERVIITGSS---DSTVRVWDVN 371
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
+ TL H + + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 372 AGEMLNTLIHHCEAVLHLRF----NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +WN +T TL+ + + Y+ V G
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 293 DNGTL 297
+ T+
Sbjct: 484 SDNTI 488
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V++ +T V+
Sbjct: 404 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 461
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 462 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 518
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +++ S D
Sbjct: 519 I---VSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 575
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 576 TILIWDF 582
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 67/266 (25%), Positives = 117/266 (43%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + +W+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+VK E AH Y+ S ++T+S D LWD E + T F GH+
Sbjct: 130 EGNVKVSRELSAHTGYL-SCCRFLDDNSIVTSSGDTTCALWDIETGQQKT-VFLGHTGDC 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M A +P D F S + D T ++W++ + T HE IN I +F + + TG
Sbjct: 188 MSLAVSP-DFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAI--CTG 244
Query: 208 SDDFTVKVWDY--ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL 265
SDD T +++D + + V E +T+V F R+++ +D IW++
Sbjct: 245 SDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAER 304
Query: 266 QNTLSSGLERVWSIGYKKGSNQVAFG 291
LS RV +G VA G
Sbjct: 305 VGILSGHDNRVSCLGVTADGMAVATG 330
Score = 198 (74.8 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 64/223 (28%), Positives = 100/223 (44%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y+ +T E +VKV+ + T +F+ ++ IV S D ++D T F
Sbjct: 124 YNLKTREGNVKVSRELSAHTGYLSCCRFLD-DNSIVTSSGDTTCALWDIETGQQKTVFLG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H SLAV P F ++ + D KLWD + C QTF GH + F P
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDATAKLWDVREG-TCRQTFSGHESDINAICFFPNG-EA 240
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYLITGSDDFTVKVW 216
+ S D T +++++ + + + +HE GI + F S ++ L+ G DDF +W
Sbjct: 241 ICTGSDDATCRLFDLRADQ-ELIVYSHESIICGITSVA-FSRSGRL-LLAGYDDFNCNIW 297
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D V IL GH N V+ + + + T S D + IWN
Sbjct: 298 DSLKAERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 196 (74.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 54/204 (26%), Positives = 93/204 (45%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + V+D T V ++ + A P+ FV
Sbjct: 56 AKIYAM-HWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N + ++ H+ Y+ F D N+ ++S D T +W+++
Sbjct: 115 GGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRF--LDDNSIVTSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ K H G +C+ ++ D I+G+ D T K+WD TC Q GH +++
Sbjct: 173 TGQQKTVFLGHT-G-DCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
A+CF P I T S+D T +++
Sbjct: 231 AICFFPNGEAICTGSDDATCRLFD 254
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 45/185 (24%), Positives = 76/185 (41%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD + S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-VWDTYTTNK-VHAIPLRSSWVMTCAYAPSG-NFVACGGLDNMCSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L AH ++C + D ++T S D T +WD ET + GHT
Sbjct: 128 TREGNVKVSRELSAHTGYLSCCRFL---DDNSIVTSSGDTTCALWDIETGQQKTVFLGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+ ++ P+ ++ I+ + D T +W+ + T S + +I + + G
Sbjct: 185 GDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 231 (86.4 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 61/251 (24%), Positives = 114/251 (45%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83
FHP + ++ + + +WN + ++K V + + S DK +
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 134
Query: 84 RVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFEG 142
V+D T VK + H ++ S P V T SDD +KLWD K QTF+
Sbjct: 135 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAVQTFQ- 192
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
+++ V+ FN + S +D I++W++ + +T+ H + + ++S+
Sbjct: 193 NTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGS 249
Query: 203 YLITGSDDFTVKVWDYET----KTCVQILEGHTNN----VTAVCFHPELRIIITASEDGT 254
YL++ + D TV+VWD + CV+I +G+ +N + + P+ I S D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 255 ILIWNATTFRL 265
+ +W+ T+ R+
Sbjct: 310 VYVWDTTSRRV 320
Score = 210 (79.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 59/220 (26%), Positives = 107/220 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC-GSDDKFIRVFDYNTMASVKEFE 98
TV +W+ + K +K S V + R +VC GSDD ++++D A+V+ F+
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ 192
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
+ + ++ + T +++ D IK+WD +N + T T GH+ V + + +
Sbjct: 193 -NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHADSVTGLSLSSEGSY 250
Query: 159 TFASASLDGTIQIWNMDSSAAK------FTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
++A +D T+++W++ A K F + H N + + D + GS D
Sbjct: 251 LLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
V VWD ++ + L GH ++ V FHP+ II++AS D
Sbjct: 310 VYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 59/204 (28%), Positives = 92/204 (45%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
A + HE + HP + +A D+LI LW+ + + T +GHS VM+
Sbjct: 58 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 117
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
+N D + SAS D T+ +W+ ++ L H +N Y + TGSDD
Sbjct: 118 YNT-DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDG 175
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
TVK+WD K VQ + +T V AV F+ II+ D I +W+ +L T+
Sbjct: 176 TVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 272 GLERVWSIGYK-KGSNQVAFGCDN 294
+ V + +GS ++ DN
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDN 258
Score = 176 (67.0 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFD-YNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117
+ V KF + D+ I +++ Y + + H + L + +
Sbjct: 67 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
+AS DK + +WD E E + +GH+ +V + + S DGT+++W++
Sbjct: 127 SASTDKTVAVWDSETG-ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 185
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
AA T + + + + TSD++ I+G D +KVWD + GH ++VT +
Sbjct: 186 AAVQTFQ-NTYQVLAVTFNDTSDQI--ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 238 CFHPELRIIITASEDGTILIWNATTF 263
E +++ + D T+ +W+ F
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDVRPF 268
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 231 (86.4 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 61/251 (24%), Positives = 114/251 (45%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83
FHP + ++ + + +WN + ++K V + + S DK +
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 134
Query: 84 RVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFEG 142
V+D T VK + H ++ S P V T SDD +KLWD K QTF+
Sbjct: 135 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQ- 192
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
+++ V+ FN + S +D I++W++ + +T+ H + + ++S+
Sbjct: 193 NTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGS 249
Query: 203 YLITGSDDFTVKVWDYET----KTCVQILEGHTNN----VTAVCFHPELRIIITASEDGT 254
YL++ + D TV+VWD + CV+I +G+ +N + + P+ I S D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 255 ILIWNATTFRL 265
+ +W+ T+ R+
Sbjct: 310 VYVWDTTSRRI 320
Score = 209 (78.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 58/220 (26%), Positives = 107/220 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC-GSDDKFIRVFDYNTMASVKEFE 98
TV +W+ + K +K S V + R +VC GSDD ++++D A+++ F+
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 192
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
+ + ++ + T +++ D IK+WD +N + T T GH+ V + + +
Sbjct: 193 -NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHADSVTGLSLSSEGSY 250
Query: 159 TFASASLDGTIQIWNMDSSAAK------FTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
++A +D T+++W++ A K F + H N + + D + GS D
Sbjct: 251 LLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
V VWD ++ + L GH ++ V FHP+ II++AS D
Sbjct: 310 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 206 (77.6 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 58/204 (28%), Positives = 92/204 (45%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
A + HE + HP + +A D+LI LW+ + + T +GHS VM+
Sbjct: 58 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 117
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
+N D + SAS D T+ +W+ ++ L H +N Y + TGSDD
Sbjct: 118 YNT-DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDG 175
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
TVK+WD K +Q + +T V AV F+ II+ D I +W+ +L T+
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 272 GLERVWSIGYK-KGSNQVAFGCDN 294
+ V + +GS ++ DN
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDN 258
Score = 175 (66.7 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFD-YNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117
+ V KF + D+ I +++ Y + + H + L + +
Sbjct: 67 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
+AS DK + +WD E E + +GH+ +V + + S DGT+++W++
Sbjct: 127 SASTDKTVAVWDSETG-ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 185
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
AA T + + + + TSD++ I+G D +KVWD + GH ++VT +
Sbjct: 186 AAIQTFQ-NTYQVLAVTFNDTSDQI--ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 238 CFHPELRIIITASEDGTILIWNATTF 263
E +++ + D T+ +W+ F
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDVRPF 268
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 231 (86.4 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 61/251 (24%), Positives = 114/251 (45%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83
FHP + ++ + + +WN + ++K V + + S DK +
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 134
Query: 84 RVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFEG 142
V+D T VK + H ++ S P V T SDD +KLWD K QTF+
Sbjct: 135 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQ- 192
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
+++ V+ FN + S +D I++W++ + +T+ H + + ++S+
Sbjct: 193 NTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGS 249
Query: 203 YLITGSDDFTVKVWDYET----KTCVQILEGHTNN----VTAVCFHPELRIIITASEDGT 254
YL++ + D TV+VWD + CV+I +G+ +N + + P+ I S D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 255 ILIWNATTFRL 265
+ +W+ T+ R+
Sbjct: 310 VYVWDTTSRRI 320
Score = 209 (78.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 58/220 (26%), Positives = 107/220 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC-GSDDKFIRVFDYNTMASVKEFE 98
TV +W+ + K +K S V + R +VC GSDD ++++D A+++ F+
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 192
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
+ + ++ + T +++ D IK+WD +N + T T GH+ V + + +
Sbjct: 193 -NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHADSVTGLSLSSEGSY 250
Query: 159 TFASASLDGTIQIWNMDSSAAK------FTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
++A +D T+++W++ A K F + H N + + D + GS D
Sbjct: 251 LLSNA-MDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
V VWD ++ + L GH ++ V FHP+ II++AS D
Sbjct: 310 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 206 (77.6 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 58/204 (28%), Positives = 92/204 (45%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
A + HE + HP + +A D+LI LW+ + + T +GHS VM+
Sbjct: 58 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 117
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
+N D + SAS D T+ +W+ ++ L H +N Y + TGSDD
Sbjct: 118 YNT-DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDG 175
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
TVK+WD K +Q + +T V AV F+ II+ D I +W+ +L T+
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 272 GLERVWSIGYK-KGSNQVAFGCDN 294
+ V + +GS ++ DN
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDN 258
Score = 175 (66.7 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFD-YNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117
+ V KF + D+ I +++ Y + + H + L + +
Sbjct: 67 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
+AS DK + +WD E E + +GH+ +V + + S DGT+++W++
Sbjct: 127 SASTDKTVAVWDSETG-ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 185
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
AA T + + + + TSD++ I+G D +KVWD + GH ++VT +
Sbjct: 186 AAIQTFQ-NTYQVLAVTFNDTSDQI--ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 238 CFHPELRIIITASEDGTILIWNATTF 263
E +++ + D T+ +W+ F
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDVRPF 268
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 231 (86.4 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 61/251 (24%), Positives = 114/251 (45%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83
FHP + ++ + + +WN + ++K V + + S DK +
Sbjct: 75 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 134
Query: 84 RVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFEG 142
V+D T VK + H ++ S P V T SDD +KLWD K QTF+
Sbjct: 135 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQ- 192
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
+++ V+ FN + S +D I++W++ + +T+ H + + ++S+
Sbjct: 193 NTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGS 249
Query: 203 YLITGSDDFTVKVWDYET----KTCVQILEGHTNN----VTAVCFHPELRIIITASEDGT 254
YL++ + D TV+VWD + CV+I +G+ +N + + P+ I S D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 255 ILIWNATTFRL 265
+ +W+ T+ R+
Sbjct: 310 VYVWDTTSRRI 320
Score = 209 (78.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 58/220 (26%), Positives = 107/220 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC-GSDDKFIRVFDYNTMASVKEFE 98
TV +W+ + K +K S V + R +VC GSDD ++++D A+++ F+
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 192
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
+ + ++ + T +++ D IK+WD +N + T T GH+ V + + +
Sbjct: 193 -NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHADSVTGLSLSSEGSY 250
Query: 159 TFASASLDGTIQIWNMDSSAAK------FTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
++A +D T+++W++ A K F + H N + + D + GS D
Sbjct: 251 LLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
V VWD ++ + L GH ++ V FHP+ II++AS D
Sbjct: 310 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 206 (77.6 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 58/204 (28%), Positives = 92/204 (45%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
A + HE + HP + +A D+LI LW+ + + T +GHS VM+
Sbjct: 58 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 117
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
+N D + SAS D T+ +W+ ++ L H +N Y + TGSDD
Sbjct: 118 YNT-DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDG 175
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
TVK+WD K +Q + +T V AV F+ II+ D I +W+ +L T+
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 272 GLERVWSIGYK-KGSNQVAFGCDN 294
+ V + +GS ++ DN
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDN 258
Score = 175 (66.7 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFD-YNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117
+ V KF + D+ I +++ Y + + H + L + +
Sbjct: 67 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
+AS DK + +WD E E + +GH+ +V + + S DGT+++W++
Sbjct: 127 SASTDKTVAVWDSETG-ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 185
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
AA T + + + + TSD++ I+G D +KVWD + GH ++VT +
Sbjct: 186 AAIQTFQ-NTYQVLAVTFNDTSDQI--ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 238 CFHPELRIIITASEDGTILIWNATTF 263
E +++ + D T+ +W+ F
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDVRPF 268
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 229 (85.7 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 68/225 (30%), Positives = 109/225 (48%)
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEA----HEDYIRSLA----VHPTFP-FVLTASDDK 123
WI S D V+ YN + + A H + ++ V +P F+LTAS+D
Sbjct: 402 WIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLPNIVSKGYPEFLLTASNDL 461
Query: 124 LIKLWDWEKNWECTQT-------FEGHSHY--VMQSAFNPKDLNTFASASLDGTIQIWNM 174
IK W K + H+H + + +P D + FA+AS D T +IWN+
Sbjct: 462 TIKKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPND-SIFATASYDKTCKIWNL 520
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNV 234
++ + TL H++G+ + F DK+ L T S D TVK+W +T + ++ LEGHTN V
Sbjct: 521 ENGELEATLANHKRGLWDVS-FCQYDKL-LATSSGDKTVKIWSLDTFSVMKTLEGHTNAV 578
Query: 235 TAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
F + + +I+ DG I IW+ ++ TL R+W++
Sbjct: 579 QRCSFINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNNRLWAL 623
Score = 229 (85.7 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 71/278 (25%), Positives = 126/278 (45%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVK---VTDS 60
PL+++I + D + S+D W+ + T +W Y+ + + + + S
Sbjct: 378 PLDVEI---YEGHEDLLNSLDATEDGLWIATASKDNTAIVWRYNENSCKFDIYAKYIGHS 434
Query: 61 PVRTA----KFVAREH--WIVCGSDDKFIR--VFDYNTMA------SVKEF--EAHEDYI 104
TA V++ + +++ S+D I+ + T + V E+ AHE I
Sbjct: 435 AAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAHEKDI 494
Query: 105 RSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS 164
+L+V P TAS DK K+W+ E N E T H + +F D A++S
Sbjct: 495 NALSVSPNDSIFATASYDKTCKIWNLE-NGELEATLANHKRGLWDVSFCQYD-KLLATSS 552
Query: 165 LDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV 224
D T++IW++D+ + TL+ H + FI K + G+D +K+WD + C+
Sbjct: 553 GDKTVKIWSLDTFSVMKTLEGHTNAVQRCS-FINKQKQLISCGADGL-IKIWDCSSGECL 610
Query: 225 QILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ L+GH N + A+ + +I++A DG W T
Sbjct: 611 KTLDGHNNRLWALSTMNDGDMIVSADADGVFQFWKDCT 648
Score = 37 (18.1 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 43 IWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
IW S T VKV D R +EH
Sbjct: 160 IWLLASGDTNGMVKVWDLVKRKCLHTLQEH 189
>UNIPROTKB|A7MB12 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006364 EMBL:BC151279 IPI:IPI00703711 RefSeq:NP_001094598.1
UniGene:Bt.13342 ProteinModelPortal:A7MB12 STRING:A7MB12
Ensembl:ENSBTAT00000036838 GeneID:526343 KEGG:bta:526343 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 InParanoid:A7MB12 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 NextBio:20874350 Uniprot:A7MB12
Length = 519
Score = 237 (88.5 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 75/311 (24%), Positives = 143/311 (45%)
Query: 2 ETPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP 61
+TP+++ KEF V VDF P P+ A S + I+ +SQ K+
Sbjct: 30 KTPVQI---KEF----GAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDT 82
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
A F +V GS+D +++FD + A +++FE H + S+ V++ +D
Sbjct: 83 AYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHSVDFTADKYHVVSGAD 142
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF 181
D +KLWD + E TF+ HS YV + + + F + S D T+++++ ++ +
Sbjct: 143 DYTVKLWDIPNSKEIL-TFKEHSDYVRCGCASKLNTDLFVTGSYDHTVKMFDARTNQSVI 201
Query: 182 TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTCVQILEGHTNNVTAVCFH 240
+++ H + + + F + L+ + VKVWD + + L+ H VT +C
Sbjct: 202 SVE-HGQPVESVLLFPSGG---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLS 257
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300
+ +++ S D + +++ T++++ ++ + S+ + G NG L VK
Sbjct: 258 SSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYTAS-ILSLALAHEDETIVVGMTNGILSVK 316
Query: 301 IGNSSGC-DSV 310
S DSV
Sbjct: 317 HRKSEAKKDSV 327
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 239 (89.2 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 65/235 (27%), Positives = 108/235 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + S V S+ + +LA+ G C +W+ + S+ +P+ + +
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLAT--GGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
A+E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C ++ H+ V F+P D ASA+ D T+++W++ + F H
Sbjct: 132 WDVRRKG-CIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 189
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
+N ++ F S + L +GS T++ WD E V +E V + F+P+
Sbjct: 190 GPVNVVE-FHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPD 243
Score = 206 (77.6 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 51/193 (26%), Positives = 85/193 (44%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G DD + V+ N V H I SL + ++ S I++WD E
Sbjct: 36 LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA 95
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P + AS SLD I++W++ F +H + + C+
Sbjct: 96 -KILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCL 153
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA-SED 252
+ + D +L + +DD TVK+WD + GH V V FHP + ++ + S
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSS 211
Query: 253 GTILIWNATTFRL 265
TI W+ F +
Sbjct: 212 MTIRFWDLEKFHV 224
Score = 188 (71.2 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 43/173 (24%), Positives = 84/173 (48%)
Query: 90 TMASVKEFEAHEDYIRSLAV-HPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
T ++E AH + SL + T + T DD + +W K C + GH+ +
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKP-NCVMSLTGHTTPIE 67
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
+ K+ + S G+I++W+++++ TL H+ I +D+ ++ +GS
Sbjct: 68 SLQISAKE-ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS--FVASGS 124
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
D +K+WD K C+ + HT V + F P+ + + +A++D T+ +W+ T
Sbjct: 125 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH ++ + ++ ++ L TG DD V VW CV L GHT + ++ +
Sbjct: 18 AHSSNVSSLVLGKSTGRL-LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEE 76
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+I+ S+ G+I +W+ ++ TL + S+ + + VA G
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASG 123
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 238 (88.8 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 63/250 (25%), Positives = 117/250 (46%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V+++ F P +++ + +W+ +Q + + + F +IV GS
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ R++D T + + E E+ + ++A+ P F+ S D++I++W + +
Sbjct: 423 DRTARLWDVETGQCILKLEI-ENGVTAIAISPNDQFIAVGSLDQIIRVWS--VSGTLVER 479
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY---- 195
EGH V AF+P D + S SLD TI++W + ++ + +GI Y
Sbjct: 480 LEGHKESVYSIAFSP-DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHT 538
Query: 196 -FITS-----DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
F+ S D + ++GS D +++ WD +T +GH N+V +VCF P+ R +
Sbjct: 539 DFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASG 598
Query: 250 SEDGTILIWN 259
S D IW+
Sbjct: 599 SGDLRARIWS 608
Score = 223 (83.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 72/271 (26%), Positives = 127/271 (46%)
Query: 43 IWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHED 102
++ H ++ + S D VRT F ++V G++D+ I+++D +T F HE
Sbjct: 347 LFTLHEESPDPS---RDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQ 403
Query: 103 YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFAS 162
I SL F+++ S D+ +LWD E +C E + V A +P D A
Sbjct: 404 DIYSLDFSHNGRFIVSGSGDRTARLWDVETG-QCILKLEIENG-VTAIAISPND-QFIAV 460
Query: 163 ASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE-TK 221
SLD I++W++ + + L+ H++ + I + + D L++GS D T+KVW+ + T+
Sbjct: 461 GSLDQIIRVWSVSGTLVE-RLEGHKESVYSIAF--SPDSSILLSGSLDKTIKVWELQATR 517
Query: 222 T-----------CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS 270
+ C GHT+ V +V P+ R ++ S+D ++ W+ T + T
Sbjct: 518 SVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQ 577
Query: 271 SGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
V S+ + Q A G +G L +I
Sbjct: 578 GHKNSVISVCFSPDGRQFASG--SGDLRARI 606
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/171 (23%), Positives = 76/171 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V ++ P ++ + +W+ E+ +S V + F ++ GS
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKES-VYSIAFSPDSSILLSGSL 504
Query: 80 DKFIRVFDYNTMASV------------KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
DK I+V++ SV + H D++ S+AV P + L+ S D+ ++
Sbjct: 505 DKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQF 564
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
WD + + T +GH + V+ F+P D FAS S D +IW++D ++
Sbjct: 565 WDLQTG-QSYLTCQGHKNSVISVCFSP-DGRQFASGSGDLRARIWSIDPAS 613
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 63/267 (23%), Positives = 116/267 (43%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + +W+ ++ ++ + S V T + ++ CG D ++ T
Sbjct: 70 LVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E +CT F GH+ V
Sbjct: 130 EGNVRVSRELPGHTGYL-SCCRFLDDNQIVTSSGDMTCALWDIETGQQCT-AFTGHTGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + +P D TF S + D + ++W++ K T HE IN + +F + + TG
Sbjct: 188 MSLSLSP-DFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNA--FATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + + H N +T+V F R++ +D +W++
Sbjct: 245 SDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQE 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G + V G
Sbjct: 304 RAGVLAGHDNRVSCLGVTEDGMAVCTG 330
Score = 215 (80.7 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 66/222 (29%), Positives = 104/222 (46%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y +T E +V+V+ + P T +F+ ++ IV S D ++D T F
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIVTSSGDMTCALWDIETGQQCTAFTG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P F ++ + D KLWD ++ C QTF GH + AF P N
Sbjct: 183 HTGDVMSLSLSPDFRTFISGACDASAKLWDI-RDGMCKQTFPGHESDINAVAFFPSG-NA 240
Query: 160 FASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
FA+ S D T +++++ D A ++ D GI + F S ++ L G DDF VWD
Sbjct: 241 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA-FSKSGRL-LFAGYDDFNCNVWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+ +L GH N V+ + + + T S D + IWN
Sbjct: 299 SMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 159 (61.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 49/204 (24%), Positives = 85/204 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + V+D T V ++ + A P+ FV
Sbjct: 56 AKIYAM-HWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + ++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIVTSSGDMTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ H + + ++ D I+G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQCTAFTGHTGDVMSLS--LSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 231 AVAFFPSGNAFATGSDDATCRLFD 254
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/185 (23%), Positives = 73/185 (39%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P + A LD I+++
Sbjct: 71 VSASQDGKLI-VWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-SFVACGGLDNICSIYSLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D T +WD ET GHT
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFL---DDNQIVTSSGDMTCALWDIETGQQCTAFTGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R I+ + D + +W+ + T + ++ + N A G
Sbjct: 185 GDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>UNIPROTKB|Q8TED0 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 EMBL:AK022849
EMBL:AK074217 EMBL:AC010279 EMBL:BC013064 EMBL:CR457295
IPI:IPI00152708 RefSeq:NP_115551.2 UniGene:Hs.406703
ProteinModelPortal:Q8TED0 SMR:Q8TED0 STRING:Q8TED0
PhosphoSite:Q8TED0 DMDM:296452998 SWISS-2DPAGE:Q8TED0 PaxDb:Q8TED0
PRIDE:Q8TED0 DNASU:84135 Ensembl:ENST00000296792 GeneID:84135
KEGG:hsa:84135 UCSC:uc003kcw.1 GeneCards:GC05P072898
HGNC:HGNC:25758 neXtProt:NX_Q8TED0 PharmGKB:PA142670631
InParanoid:Q8TED0 ChiTaRS:UTP15 GenomeRNAi:84135 NextBio:73441
ArrayExpress:Q8TED0 Bgee:Q8TED0 CleanEx:HS_UTP15
Genevestigator:Q8TED0 GermOnline:ENSG00000164338 Uniprot:Q8TED0
Length = 518
Score = 236 (88.1 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 76/303 (25%), Positives = 141/303 (46%)
Query: 2 ETPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP 61
+TP+++ KEF V VDF P P+ A S + I+ +SQ K+
Sbjct: 30 KTPVQI---KEF----GAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDT 82
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
A F +V GS+D +++FD + A +++FE H + ++ V++ +D
Sbjct: 83 AYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGAD 142
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVM---QSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
D +KLWD + E TF+ HS YV S NP DL F + S D T+++++ +S
Sbjct: 143 DYTVKLWDIPNSKEIL-TFKEHSDYVRCGCASKLNP-DL--FITGSYDHTVKMFDARTSE 198
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTCVQILEGHTNNVTAV 237
+ +++ H + + + F + L+ + VKVWD + + L+ H VT +
Sbjct: 199 SVLSVE-HGQPVESVLLFPSGG---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCL 254
Query: 238 CFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
C + +++ S D + +++ T++++ ++ + S+ + G NG L
Sbjct: 255 CLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAAS-ILSLALAHEDETIVVGMTNGIL 313
Query: 298 IVK 300
VK
Sbjct: 314 SVK 316
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 230 (86.0 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 64/249 (25%), Positives = 111/249 (44%)
Query: 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS 78
+V D+ P + +++S G + IW+ + E +V + + + + +++ CG
Sbjct: 72 KVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGG 131
Query: 79 DDKFIRVFDYNT---MASVKE-FEAHEDYIRSLAVHPTFPF-VLTASDDKLIKLWDWEKN 133
D + V+ + MA+ K H Y+ S ++P +LT S D LWD E
Sbjct: 132 LDNKVTVYPITSDEEMAAKKRTVGTHTSYM-SCCIYPNSDQQILTGSGDSTCALWDVESG 190
Query: 134 WECTQTFEGHSHYVMQSAFNPKDL-NTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ Q+F GHS VM P + NTF S S D IW+M S + + H+ +N
Sbjct: 191 -QLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNS 249
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL--EGHTNNVTAVCFHPELRIIITAS 250
+ + D + TGSDD + +++D V + E V +V F R++
Sbjct: 250 VKFHPCGDAI--ATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGY 307
Query: 251 EDGTILIWN 259
D T+ +W+
Sbjct: 308 NDYTVNLWD 316
Score = 197 (74.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 53/189 (28%), Positives = 95/189 (50%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--TFPFVLTASDDKLIKLWDWE 131
I+ GS D ++D + ++ F H + ++ + P T ++ S D++ +WD
Sbjct: 173 ILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDM- 231
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM--DSSAAKFTLDAHEKG 189
++ Q+FEGH V F+P + A+ S D + ++++M D A F ++ G
Sbjct: 232 RSGHVVQSFEGHQSDVNSVKFHPCG-DAIATGSDDSSCRLYDMRADREVAVFAKESIIFG 290
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
+N +D+ + S ++ L G +D+TV +WD V +L GH N V+ V P+ + T
Sbjct: 291 VNSVDFSV-SGRL-LFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTG 348
Query: 250 SEDGTILIW 258
S D TI +W
Sbjct: 349 SWDYTIRVW 357
Score = 150 (57.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 49/209 (23%), Positives = 92/209 (44%)
Query: 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD-WEKNWECTQTFEGHSHYVMQSAFN 153
K + H+ + P ++++S D + +WD + N E T + ++M A+
Sbjct: 64 KVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMP--TTWIMACAYA 121
Query: 154 PKDLNTFASASLDGTIQIWNMDS----SAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
P N A LD + ++ + S +A K T+ H ++C Y SD+ ++TGS
Sbjct: 122 PSG-NFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIY-PNSDQ-QILTGSG 178
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL--RIIITASEDGTILIWNATTFRLQN 267
D T +WD E+ +Q GH+ +V A+ P ++ S D IW+ + +
Sbjct: 179 DSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQ 238
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGT 296
+ V S+ + + +A G D+ +
Sbjct: 239 SFEGHQSDVNSVKFHPCGDAIATGSDDSS 267
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 243 (90.6 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 66/263 (25%), Positives = 121/263 (46%)
Query: 38 SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97
SG +WN + E ++ DSPVR + + W++ +++ + N M +VK F
Sbjct: 141 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 199
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP-KD 156
+AH++ IR + PT T SDD +++WD+ + E + GH V ++P K
Sbjct: 200 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPTKG 258
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
L S I+ W+ + + TL AH+ + + + + +L+T S D K++
Sbjct: 259 LVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKLF 316
Query: 217 DYET-KTCVQILEGHTNNVTAVCFHPELR-IIITASEDGTILIWNATTFRLQNTLSSGLE 274
D K +Q+ GH TAV +HP + + DG++L W+ + + E
Sbjct: 317 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 376
Query: 275 -RVWSIGYKKGSNQVAFGCDNGT 296
+WS+ + + + G ++ T
Sbjct: 377 GMIWSLAWHPLGHILCSGSNDHT 399
Score = 192 (72.6 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 66/254 (25%), Positives = 117/254 (46%)
Query: 45 NYHSQTTEKSVKVTDSPVRTAKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFE 98
N + T K V+ + + V+ FV W +V G+ +++ T +
Sbjct: 101 NPMNAVTTKFVRTSTNKVKCPVFVVG-WWTPEGRRLVTGASSGEFTLWNGLTFNFETILQ 159
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
AH+ +R++ ++LTA +K W + N + F+ H + +++F+P D N
Sbjct: 160 AHDSPVRAMTWSHNDMWMLTADHGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTD-N 216
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFT--VKVW 216
FA+ S DGT++IW+ + L H + C+D+ T K +++GS D +K W
Sbjct: 217 KFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT--KGLVVSGSKDSQQPIKFW 274
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERV 276
D +T + L H N V V + ++TAS D + F ++N L L+ V
Sbjct: 275 DPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKL-----FDIRN-LKEELQ-V 327
Query: 277 WSIGYKKGSNQVAF 290
+ G+KK + VA+
Sbjct: 328 FR-GHKKEATAVAW 340
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K F + ++ F PT GTV IW++ E+ ++ + V+ +
Sbjct: 197 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 256
Query: 71 EHWIVCGSDDKF--IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ +V GS D I+ +D T S+ AH++ + + ++ ++LTAS D L KL+
Sbjct: 257 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 316
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHE 187
D E Q F GH A++P FAS DG++ W++ ++ AHE
Sbjct: 317 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 376
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVW 216
I + + L +GS+D T K W
Sbjct: 377 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 403
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 54/250 (21%), Positives = 105/250 (42%)
Query: 14 IQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
+Q D V+++ + W+L + + G V W + K + +R A F ++
Sbjct: 158 LQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV-KMFQAHKEAIREASFSPTDN 216
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL--IKLWDW 130
SDD +R++D+ + H ++ + HPT V++ S D IK WD
Sbjct: 217 KFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD- 275
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAHEKG 189
K + T H + VM+ N N +AS D +++++ + + + H+K
Sbjct: 276 PKTGQSLATLHAHKNTVMEVKLNLNG-NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKE 334
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-GHTNNVTAVCFHPELRIIIT 248
+ + + ++ GSD ++ W + V +E H + ++ +HP I+ +
Sbjct: 335 ATAVAWHPVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCS 393
Query: 249 ASEDGTILIW 258
S D T W
Sbjct: 394 GSNDHTSKFW 403
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 237 (88.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 60/211 (28%), Positives = 101/211 (47%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ S+DF +++ TVC+W+ + +K + TD V T F +I GS
Sbjct: 391 IYSLDFSKDGKTLVSGSGDRTVCLWDVEAGE-QKLILHTDDGVTTVMFSPDGQFIAAGSL 449
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD---------- 129
DK IR++ ++ V++ HE+ + S+A P ++++ S D IKLW+
Sbjct: 450 DKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPS 508
Query: 130 -WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+++ C QTF GH +++ +P D S S D TIQ W+ DS ++ TL H
Sbjct: 509 MYKEGGICKQTFTGHKDFILSVTVSP-DGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNN 567
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYE 219
+ I ++ + TGS D ++W YE
Sbjct: 568 SV--ISVAVSPNGHCFATGSGDLRARIWSYE 596
Score = 199 (75.1 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 62/253 (24%), Positives = 111/253 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V+SV F P ++ + + IW+ + + + + + + F +V GS
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 80 DKFIRVFDYNTMASVKEFEAH-EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D+ + ++D A ++ H +D + ++ P F+ S DK+I++W + +
Sbjct: 409 DRTVCLWDVE--AGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT--SSGTLVE 464
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD--SSAA----------KFTLDAH 186
GH V AF+P D S SLD TI++W + S+ A K T H
Sbjct: 465 QLHGHEESVYSVAFSP-DGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGH 523
Query: 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRII 246
+ I + ++ D ++I+GS D T++ W ++ L+GH N+V +V P
Sbjct: 524 KDFI--LSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCF 581
Query: 247 ITASEDGTILIWN 259
T S D IW+
Sbjct: 582 ATGSGDLRARIWS 594
Score = 199 (75.1 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 72/264 (27%), Positives = 116/264 (43%)
Query: 52 EKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP 111
E S + D VR+ F ++ G +D+ IR++D + HE I SL
Sbjct: 339 ESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSK 398
Query: 112 TFPFVLTASDDKLIKLWDWEKNWE--CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169
+++ S D+ + LWD E + T +G V F+P D A+ SLD I
Sbjct: 399 DGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG----VTTVMFSP-DGQFIAAGSLDKVI 453
Query: 170 QIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD-----------Y 218
+IW + + L HE+ + + + + D YL++GS D T+K+W+ Y
Sbjct: 454 RIWTSSGTLVE-QLHGHEESVYSVAF--SPDGKYLVSGSLDNTIKLWELQCVSNVAPSMY 510
Query: 219 -ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVW 277
E C Q GH + + +V P+ + II+ S+D TI W+ + Q TL V
Sbjct: 511 KEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVI 570
Query: 278 SIGYKKGSNQVAFGCDNGTLIVKI 301
S+ + A G +G L +I
Sbjct: 571 SVAVSPNGHCFATG--SGDLRARI 592
Score = 139 (54.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 44/178 (24%), Positives = 83/178 (46%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
+K + D V +V F P ++ A + IW S T + + + V + F
Sbjct: 422 QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSP 480
Query: 70 REHWIVCGSDDKFIRVFDYNTMASV-----KE-------FEAHEDYIRSLAVHPTFPFVL 117
++V GS D I++++ +++V KE F H+D+I S+ V P +++
Sbjct: 481 DGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWII 540
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+ S D+ I+ W + T +GH++ V+ A +P + FA+ S D +IW+ +
Sbjct: 541 SGSKDRTIQFWSPDSP-HSQLTLQGHNNSVISVAVSPNG-HCFATGSGDLRARIWSYE 596
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 236 (88.1 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 76/307 (24%), Positives = 141/307 (45%)
Query: 5 LELQIEKEFIQKSDRVKSV-DFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVT---DS 60
L+ + + +F+Q++ +KSV D P+ + + + T + N + + + T +S
Sbjct: 233 LQKEEDLDFLQET--IKSVQDGPPSLITIYSYAFYNTEQLLNTAEASPDNKLLATGLNNS 290
Query: 61 PVR----TAKFVAREHWIVCGS----DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPT 112
++ T+KF ++ H I +D + T K H + S P
Sbjct: 291 SIKLWSLTSKFKSKPHQIDVSHIHLINDTLEVDEEDRTATERKVLLGHCGPVYSTRFLPD 350
Query: 113 FPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW 172
+L+ S+D I+ WD E ++ T ++GH++ V +P L FASAS D T ++W
Sbjct: 351 SSALLSCSEDTSIRYWDLE-SFTNTVLYQGHAYPVWDLDISPHSL-FFASASYDHTARLW 408
Query: 173 NMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTN 232
+ D + H G++C+ + S+ YL TGS D TV++W + V++ GH
Sbjct: 409 SFDRTYPLRIYAGHLAGVDCVKFHPNSN--YLATGSTDKTVRLWSAQQGNSVRLFTGHCG 466
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V + F P + +++A ED + +W+ + L L + + S+ + S+ +A
Sbjct: 467 PVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASAS 526
Query: 293 -DNGTLI 298
DN I
Sbjct: 527 MDNSVRI 533
Score = 226 (84.6 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 53/210 (25%), Positives = 105/210 (50%)
Query: 51 TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAV 109
TE+ V + PV + +F+ ++ S+D IR +D + + ++ H + L +
Sbjct: 330 TERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDI 389
Query: 110 HPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169
P F +AS D +LW +++ + + + GH V F+P N A+ S D T+
Sbjct: 390 SPHSLFFASASYDHTARLWSFDRTYPL-RIYAGHLAGVDCVKFHPNS-NYLATGSTDKTV 447
Query: 170 QIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG 229
++W+ + H + C+ + + + YL++ +D +K+WD + T + L G
Sbjct: 448 RLWSAQQGNSVRLFTGHCGPVRCLAF--SPNGQYLVSAGEDQLLKLWDLASGTLYKDLHG 505
Query: 230 HTNNVTAVCFHPELRIIITASEDGTILIWN 259
HT+++T+V F + +I +AS D ++ IW+
Sbjct: 506 HTDDITSVTFSLDSSVIASASMDNSVRIWD 535
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/157 (26%), Positives = 76/157 (48%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V +D P + ++ Y T +W++ + + V KF +++ GS
Sbjct: 384 VWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGST 443
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK +R++ SV+ F H +R LA P ++++A +D+L+KLWD +
Sbjct: 444 DKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASG-TLYKD 502
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS 176
GH+ + F+ D + ASAS+D +++IW++ S
Sbjct: 503 LHGHTDDITSVTFS-LDSSVIASASMDNSVRIWDIKS 538
>RGD|1310992 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310992 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:BC131851 IPI:IPI00360292 RefSeq:NP_001101117.1 UniGene:Rn.7959
ProteinModelPortal:A2RRU3 STRING:A2RRU3 PRIDE:A2RRU3
Ensembl:ENSRNOT00000022259 GeneID:310019 KEGG:rno:310019
UCSC:RGD:1310992 InParanoid:A2RRU3 NextBio:661554
ArrayExpress:A2RRU3 Genevestigator:A2RRU3 Uniprot:A2RRU3
Length = 528
Score = 235 (87.8 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 77/303 (25%), Positives = 139/303 (45%)
Query: 2 ETPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP 61
+TP+++ KEF V VDF P P+ A S + I+ +SQ K+
Sbjct: 30 KTPVQI---KEF----GAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPVKTFSRFKDT 82
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
A F +V GS+D +++FD + A +++FE H + ++ V++ +D
Sbjct: 83 AYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGAD 142
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVM---QSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
D +KLWD + E TF+ HS YV S NP DL F + S D T+++++ ++
Sbjct: 143 DYTVKLWDIPNSKEIL-TFKEHSDYVRCGCASKLNP-DL--FVTGSYDHTVKMFDARTNK 198
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTCVQILEGHTNNVTAV 237
++ H + + + F + L+ + VKVWD + + L+ H VT +
Sbjct: 199 NVLCVE-HGQPVESVLLFPSGG---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCL 254
Query: 238 CFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
C + +++ S D + I++ T++++ ++ + S+ V G NG L
Sbjct: 255 CLSSSGQRLLSGSLDRKVKIYSTTSYKVVHSFDYAAS-ILSLALSHQDETVVVGMTNGIL 313
Query: 298 IVK 300
VK
Sbjct: 314 SVK 316
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 239 (89.2 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 75/302 (24%), Positives = 139/302 (46%)
Query: 2 ETPLELQIEKE--FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTD 59
E+ L +I K F+Q + +K FH ++A +G ++ ++ ++
Sbjct: 241 ESDLRWRIVKRHYFMQNNASLKCAAFHAESNLLVAGFSNGIFGLYEMPDFNLIHTLSISQ 300
Query: 60 SPVRTAKFVAREHWIVCGSDDKF-IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
+ + W+ G+ + V+++ + + + + + H D + +LA P ++T
Sbjct: 301 NGIDFVSINKSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIVT 360
Query: 119 ASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
A+DD +K+WD E + C TF H+ V F K N +ASLDG+I+ W++
Sbjct: 361 AADDGKLKVWDIESGF-CIVTFTEHTSGVTACQFAKKG-NVLFTASLDGSIRAWDLIRYR 418
Query: 179 AKFTLDAHEK-GINCIDYFITSDKVYLITGS-DDFTVKVWDYETKTCVQILEGHTNNVTA 236
T A + +C+ + + V GS D F V +W +T + L GH V+A
Sbjct: 419 NFRTFTAPTRLSFSCMAVDPSGEVV--AAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSA 476
Query: 237 VCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLER-VWSIGYKKGSNQVAFGCDNG 295
V F P+ ++++ S D T IW+ R Q + L+ V S+ + S+Q+A +G
Sbjct: 477 VAFAPDGGLLVSGSWDKTARIWSVFN-RTQTSEPLQLQADVLSVAVRPDSSQLAVSTLDG 535
Query: 296 TL 297
+
Sbjct: 536 QI 537
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 50/226 (22%), Positives = 93/226 (41%)
Query: 39 GTVCIWNYHSQT-TEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97
G + +W + S++ K DS + + IV +DD ++V+D + + F
Sbjct: 323 GQLLVWEWQSESYILKQQGHFDS-MNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVTF 381
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQS-AFNPKD 156
H + + + TAS D I+ WD + + +TF + A +P
Sbjct: 382 TEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIR-YRNFRTFTAPTRLSFSCMAVDPSG 440
Query: 157 LNTFASASLDG-TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
A+ SLD + IW++ + L HE ++ + + D L++GS D T ++
Sbjct: 441 -EVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAF--APDGGLLVSGSWDKTARI 497
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
W +T +V +V P+ + ++ DG I W+ T
Sbjct: 498 WSVFNRTQTSEPLQLQADVLSVAVRPDSSQLAVSTLDGQISFWSVT 543
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 231 (86.4 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 61/251 (24%), Positives = 114/251 (45%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83
FHP + ++ + + +WN + ++K V + + S DK +
Sbjct: 74 FHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 133
Query: 84 RVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFEG 142
V+D T VK + H ++ S P V T SDD +KLWD K QTF+
Sbjct: 134 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQ- 191
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
+++ V+ FN + S +D I++W++ + +T+ H + + ++S+
Sbjct: 192 NTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGS 248
Query: 203 YLITGSDDFTVKVWDYET----KTCVQILEGHTNN----VTAVCFHPELRIIITASEDGT 254
YL++ + D TV+VWD + CV+I +G+ +N + + P+ I S D
Sbjct: 249 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 308
Query: 255 ILIWNATTFRL 265
+ +W+ T+ R+
Sbjct: 309 VYVWDTTSRRI 319
Score = 206 (77.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 58/204 (28%), Positives = 92/204 (45%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
A + HE + HP + +A D+LI LW+ + + T +GHS VM+
Sbjct: 57 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 116
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
+N D + SAS D T+ +W+ ++ L H +N Y + TGSDD
Sbjct: 117 YNT-DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDG 174
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
TVK+WD K +Q + +T V AV F+ II+ D I +W+ +L T+
Sbjct: 175 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 233
Query: 272 GLERVWSIGYK-KGSNQVAFGCDN 294
+ V + +GS ++ DN
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDN 257
Score = 194 (73.4 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 56/216 (25%), Positives = 103/216 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC-GSDDKFIRVFDYNTMASVKEFE 98
TV +W+ + K +K S V + R +VC GSDD ++++D A+++ F+
Sbjct: 132 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 191
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
+ + ++ + T +++ D IK+WD +N + T T GH+ V + + +
Sbjct: 192 -NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHADSVTGLSLSSEGSY 249
Query: 159 TFASASLDGTIQIWNMDSSAAK------FTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
++A +D T+++W++ A K F + H N + + D + GS D
Sbjct: 250 LLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 308
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
V VWD ++ + L GH ++ V FHP+ II T
Sbjct: 309 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIET 344
Score = 175 (66.7 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFD-YNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117
+ V KF + D+ I +++ Y + + H + L + +
Sbjct: 66 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 125
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
+AS DK + +WD E E + +GH+ +V + + S DGT+++W++
Sbjct: 126 SASTDKTVAVWDSETG-ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 184
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
AA T + + + + TSD++ I+G D +KVWD + GH ++VT +
Sbjct: 185 AAIQTFQ-NTYQVLAVTFNDTSDQI--ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 241
Query: 238 CFHPELRIIITASEDGTILIWNATTF 263
E +++ + D T+ +W+ F
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVWDVRPF 267
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 234 (87.4 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 54/186 (29%), Positives = 91/186 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+V GS D R++D +T + + H ++ +++ P + T S D +++WD +K
Sbjct: 164 MVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKG 223
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNT-----FASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+GH ++ A+ P L ASAS D T++IW++ S A L H+
Sbjct: 224 QALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKG 283
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
+ C+ + T K+Y T S D T+KVW+ +T T +Q L H + V + + I+ T
Sbjct: 284 SVTCVRWGGTG-KIY--TSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDF-ILRT 339
Query: 249 ASEDGT 254
A D T
Sbjct: 340 AYHDHT 345
Score = 203 (76.5 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 60/263 (22%), Positives = 117/263 (44%)
Query: 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89
P + ++ TV IW+ S+ + + V ++ I S D+ I+V++
Sbjct: 253 PRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRTIKVWNSQ 311
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQ 149
T ++ AH + LA+ F + TA D K+ + + + + +
Sbjct: 312 TGTLIQTLSAHAHRVNHLALSTDF-ILRTAYHDHTGKVPESDAD----KVAMAKKRFEKA 366
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT-LDAHEKGINCIDYFITSDKVYLITGS 208
+ N K + SAS D T+ +W+ +SS+ L H+K +N + + + D Y+ +
Sbjct: 367 ATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTF--SPDMAYIASAG 424
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268
D VK+W+ + L GH V CF + R+++++S+D T+ +WN T +L
Sbjct: 425 FDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSED 484
Query: 269 LSSGLERVWSIGYKKGSNQVAFG 291
L + V+++ + +V G
Sbjct: 485 LPGHKDEVFAVDWSPDGQKVGSG 507
Score = 174 (66.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/176 (26%), Positives = 86/176 (48%)
Query: 136 CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY 195
C+ + GH ++ ++F+P +T S S D T +IW+ D+ TL H + + Y
Sbjct: 140 CSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSY 199
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQI-LEGHTNNVTAVCFHP-ELRI-----IIT 248
+ + + TGS D TV++WD + + L+GH +T++ + P L+ + +
Sbjct: 200 --SPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
AS+D T+ IW+ + R LS V + + G+ ++ + T +K+ NS
Sbjct: 258 ASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWG-GTGKIYTSSHDRT--IKVWNS 310
Score = 170 (64.9 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 64/261 (24%), Positives = 117/261 (44%)
Query: 16 KSDRVKSVDFHPTQPWVLASLYSGTV-CI-WN----YHSQTTEKSVKVTDSPVRTA--KF 67
K V+ D + ++ S + G+V C+ W ++ + ++++KV +S T
Sbjct: 260 KDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQTL 319
Query: 68 VAREHWI--VCGSDDKFIRVFDYNTMASVKEFEAHE------DYIRSLAVHPTF-PFVLT 118
A H + + S D +R ++ V E +A + + ++ ++ +++
Sbjct: 320 SAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKLVS 379
Query: 119 ASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
ASDD + LWD E + + GH V F+P D+ ASA D +++WN
Sbjct: 380 ASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSP-DMAYIASAGFDNHVKLWNGRDGK 438
Query: 179 AKFTLDAHEKGI-NCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
TL H + C ++D L++ S D T+KVW+ T + L GH + V AV
Sbjct: 439 FITTLRGHVGAVYQCC---FSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAV 495
Query: 238 CFHPELRIIITASEDGTILIW 258
+ P+ + + + +D I IW
Sbjct: 496 DWSPDGQKVGSGGKDKAIRIW 516
Score = 159 (61.0 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 54/227 (23%), Positives = 96/227 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ S D +R++D + + H+ + + T + T+S D+ IK+W+ +
Sbjct: 255 LASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRTIKVWN-SQT 312
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
QT H+H V A + + +A D T ++ D+ EK
Sbjct: 313 GTLIQTLSAHAHRVNHLALSTDFI--LRTAYHDHTGKVPESDADKVAMAKKRFEKAATIN 370
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTC-VQILEGHTNNVTAVCFHPELRIIITASED 252
+ + +K L++ SDDFT+ +WD E+ + V L GH V V F P++ I +A D
Sbjct: 371 NKIV--EK--LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFD 426
Query: 253 GTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ +WN + TL + V+ + S + + TL V
Sbjct: 427 NHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKV 473
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 177 SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTA 236
S ++ H + I + S +++GS D T ++WD +T T + L+GHT+ V A
Sbjct: 138 SRCSASIAGHGEAILATSFSPVSSST-MVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLA 196
Query: 237 VCFHPELRIIITASEDGTILIWNA 260
V + P +I T S D T+ IW+A
Sbjct: 197 VSYSPNGAMIATGSMDNTVRIWDA 220
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 235 (87.8 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 65/262 (24%), Positives = 127/262 (48%)
Query: 13 FIQKSDR-----VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKF 67
F+ +S++ ++SV F P ++ TV +W+ H++ + + + + + +
Sbjct: 318 FVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDY 377
Query: 68 VAREHWIVCGSDDKFIRVFDYN----TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+ +IV GS DK +++D E ++ + S+A+ P V S D
Sbjct: 378 SSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDN 437
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF-- 181
+++LWD + + + +EGH V AF+P D + AS SLD ++++W++ S ++
Sbjct: 438 IVRLWDAQTGY-FLERYEGHLDSVYSVAFSP-DGKSLASGSLDKSLKLWDLSGSRSRSRC 495
Query: 182 --TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
T + H+ + + + + D +LI+GS D +V+ WD T +L+GH N+V +V
Sbjct: 496 RATFNGHKDFVLSVAF--SPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVAL 553
Query: 240 HPELR---IIITASEDGTILIW 258
P+ + T S D +W
Sbjct: 554 SPKNNSHGVFATGSGDFRSRLW 575
Score = 208 (78.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 65/224 (29%), Positives = 109/224 (48%)
Query: 52 EKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP 111
++S K D +R+ F +++ G++DK ++V+D +T F HE I SL
Sbjct: 320 DESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSS 379
Query: 112 TFPFVLTASDDKLIKLWDWEKNWECTQTFE----GHSHYVMQSAFNPKDLNTFASASLDG 167
F+++ S DK K+WD EK +C T G + V A +P D A+ SLD
Sbjct: 380 DGRFIVSGSGDKKAKIWDIEKG-KCAFTLGNEEVGPKNGVTSVAMSP-DGRLVAAGSLDN 437
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFI--TSDKVYLITGSDDFTVKVWDYE----TK 221
+++W D+ F L+ +E ++ + Y + + D L +GS D ++K+WD
Sbjct: 438 IVRLW--DAQTGYF-LERYEGHLDSV-YSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRS 493
Query: 222 TCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW---NATT 262
C GH + V +V F P+ +I+ S+D ++ W N TT
Sbjct: 494 RCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTT 537
Score = 199 (75.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 63/222 (28%), Positives = 104/222 (46%)
Query: 84 RVFDYNTMASVKEF--EAHED---YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
+++D +T V F E+ +D YIRS+ P ++ T ++DK +K+WD +
Sbjct: 305 QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTK-KIQH 363
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI-NCIDYFI 197
TF GH + ++ D S S D +IW+++ FTL E G N +
Sbjct: 364 TFYGHELDIYSLDYS-SDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVA 422
Query: 198 TSDKVYLIT-GSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
S L+ GS D V++WD +T ++ EGH ++V +V F P+ + + + S D ++
Sbjct: 423 MSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLK 482
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298
+W+ L + S R G+K VAF D LI
Sbjct: 483 LWD-----LSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLI 519
Score = 187 (70.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 43/151 (28%), Positives = 73/151 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE-- 131
+ GS D +R++D T ++ +E H D + S+A P + + S DK +KLWD
Sbjct: 430 VAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGS 489
Query: 132 -KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
C TF GH +V+ AF+P D + S S D ++Q W+ + L H+ +
Sbjct: 490 RSRSRCRATFNGHKDFVLSVAFSP-DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSV 548
Query: 191 NCIDYFITSDKVYLI-TGSDDFTVKVWDYET 220
+ ++ + TGS DF ++W Y++
Sbjct: 549 ISVALSPKNNSHGVFATGSGDFRSRLWKYDS 579
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 41/142 (28%), Positives = 65/142 (45%)
Query: 160 FASASLDGTIQIWNMDSSAAKFT-LDAHEKG--INCIDYFITSDKVYLITGSDDFTVKVW 216
+ + + + QI+++D+ +D EK + + D YL TG++D TVKVW
Sbjct: 295 YLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVW 354
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERV 276
D TK GH ++ ++ + + R I++ S D IW+ + TL G E V
Sbjct: 355 DIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTL--GNEEV 412
Query: 277 WSIGYKKGSNQVAFGCDNGTLI 298
G K G VA D G L+
Sbjct: 413 ---GPKNGVTSVAMSPD-GRLV 430
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 234 (87.4 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 62/256 (24%), Positives = 126/256 (49%)
Query: 7 LQIEKEFIQ-KSDRVK----SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP 61
L ++ +F+ S++VK +V + P +L + +SG +WN + E ++ +SP
Sbjct: 120 LDLQTKFVHLSSNKVKHTINTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAHESP 179
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
+ T K+ + W++ G + ++ + N +V AH + +R +A P LT D
Sbjct: 180 ILTMKYSNHDEWLLSGDQNGTVKYWQPN-FNNVNNISAHANGVRDIAFSPNDSKFLTCGD 238
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVMQSA-FNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D IK+W++ E +T GH H+ ++SA ++P +L S S D +++W+ S+
Sbjct: 239 DSAIKIWNFNNGKE-ERTLSGH-HWEVKSADWHP-NLGLIVSGSKDNLVKLWDPRSANCV 295
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
TL + +N + L + S D + +++D T + ++ +++ V +H
Sbjct: 296 STLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRDSETDLSCVAWH 355
Query: 241 P-ELRIIITASEDGTI 255
P ++ TA+ +G+I
Sbjct: 356 PIHASMVTTAAYNGSI 371
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/195 (24%), Positives = 84/195 (43%)
Query: 116 VLTASDDKLIKLWDWEK-NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
+L AS LW+ N+E + H ++ ++ D S +GT++ W
Sbjct: 150 LLVASHSGEFTLWNGMTFNFETIM--QAHESPILTMKYSNHD-EWLLSGDQNGTVKYWQP 206
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNV 234
+ + + AH G+ I F +D +L G DD +K+W++ + L GH V
Sbjct: 207 NFNNVN-NISAHANGVRDIA-FSPNDSKFLTCG-DDSAIKIWNFNNGKEERTLSGHHWEV 263
Query: 235 TAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
+ +HP L +I++ S+D + +W+ + +TL G+K N+ F N
Sbjct: 264 KSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLH---------GFKHTVNKTRFQ-PN 313
Query: 295 GT--LIVKIGNSSGC 307
GT L+ + C
Sbjct: 314 GTARLLASVSRDRSC 328
Score = 124 (48.7 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 41/150 (27%), Positives = 64/150 (42%)
Query: 163 ASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT 222
AS G +WN + + + AHE I + Y ++ +L++G + TVK W
Sbjct: 153 ASHSGEFTLWNGMTFNFETIMQAHESPILTMKY--SNHDEWLLSGDQNGTVKYWQPNFNN 210
Query: 223 CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
V + H N V + F P +T +D I IWN + + TLS V S +
Sbjct: 211 -VNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWH 269
Query: 283 KGSNQVAFGC-DNGTLIVKIGN--SSGCDS 309
+ G DN +VK+ + S+ C S
Sbjct: 270 PNLGLIVSGSKDN---LVKLWDPRSANCVS 296
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 234 (87.4 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 62/256 (24%), Positives = 126/256 (49%)
Query: 7 LQIEKEFIQ-KSDRVK----SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP 61
L ++ +F+ S++VK +V + P +L + +SG +WN + E ++ +SP
Sbjct: 120 LDLQTKFVHLSSNKVKHTINTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAHESP 179
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
+ T K+ + W++ G + ++ + N +V AH + +R +A P LT D
Sbjct: 180 ILTMKYSNHDEWLLSGDQNGTVKYWQPN-FNNVNNISAHANGVRDIAFSPNDSKFLTCGD 238
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVMQSA-FNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D IK+W++ E +T GH H+ ++SA ++P +L S S D +++W+ S+
Sbjct: 239 DSAIKIWNFNNGKE-ERTLSGH-HWEVKSADWHP-NLGLIVSGSKDNLVKLWDPRSANCV 295
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
TL + +N + L + S D + +++D T + ++ +++ V +H
Sbjct: 296 STLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRDSETDLSCVAWH 355
Query: 241 P-ELRIIITASEDGTI 255
P ++ TA+ +G+I
Sbjct: 356 PIHASMVTTAAYNGSI 371
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/195 (24%), Positives = 84/195 (43%)
Query: 116 VLTASDDKLIKLWDWEK-NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
+L AS LW+ N+E + H ++ ++ D S +GT++ W
Sbjct: 150 LLVASHSGEFTLWNGMTFNFETIM--QAHESPILTMKYSNHD-EWLLSGDQNGTVKYWQP 206
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNV 234
+ + + AH G+ I F +D +L G DD +K+W++ + L GH V
Sbjct: 207 NFNNVN-NISAHANGVRDIA-FSPNDSKFLTCG-DDSAIKIWNFNNGKEERTLSGHHWEV 263
Query: 235 TAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294
+ +HP L +I++ S+D + +W+ + +TL G+K N+ F N
Sbjct: 264 KSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLH---------GFKHTVNKTRFQ-PN 313
Query: 295 GT--LIVKIGNSSGC 307
GT L+ + C
Sbjct: 314 GTARLLASVSRDRSC 328
Score = 124 (48.7 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 41/150 (27%), Positives = 64/150 (42%)
Query: 163 ASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT 222
AS G +WN + + + AHE I + Y ++ +L++G + TVK W
Sbjct: 153 ASHSGEFTLWNGMTFNFETIMQAHESPILTMKY--SNHDEWLLSGDQNGTVKYWQPNFNN 210
Query: 223 CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
V + H N V + F P +T +D I IWN + + TLS V S +
Sbjct: 211 -VNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWH 269
Query: 283 KGSNQVAFGC-DNGTLIVKIGN--SSGCDS 309
+ G DN +VK+ + S+ C S
Sbjct: 270 PNLGLIVSGSKDN---LVKLWDPRSANCVS 296
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D ++ T
Sbjct: 26 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 85
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T F GHS V
Sbjct: 86 EGNVRVSRELPGHTGYL-SCCRFLDDNQIITSSGDTTCALWDIETGQQ-TVGFAGHSGDV 143
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D TF S + D +I++W++ S + T HE IN + +F + TG
Sbjct: 144 MSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTG 200
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + ++ H N +T+V F R+++ +D IW+A
Sbjct: 201 SDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGD 259
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 260 RAGVLAGHDNRVSCLGVTDDGMAVATG 286
Score = 189 (71.6 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y +T E +V+V+ + P T +F+ ++ I+ S D ++D T F
Sbjct: 80 YSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSSGDTTCALWDIETGQQTVGFAG 138
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P ++ + D IKLWD + C QTF GH + AF P
Sbjct: 139 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM-CRQTFIGHESDINAVAFFPNGY-A 196
Query: 160 FASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
F + S D T +++++ D ++ D GI + F S ++ L+ G DDF +WD
Sbjct: 197 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA-FSRSGRL-LLAGYDDFNCNIWD 254
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 255 AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 157 (60.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 47/204 (23%), Positives = 85/204 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ FV
Sbjct: 12 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVAC 70
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + ++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 71 GGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIE 128
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ H + + + D ++G+ D ++K+WD C Q GH +++
Sbjct: 129 TGQQTVGFAGHSGDVMSLS--LAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDIN 186
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 187 AVAFFPNGYAFTTGSDDATCRLFD 210
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 50/201 (24%), Positives = 79/201 (39%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+++
Sbjct: 27 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NFVACGGLDNICSIYSLK 83
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D +IT S D T +WD ET GH+
Sbjct: 84 TREGNVRVSRELPGHTGYLSCCRFL---DDNQIITSSGDTTCALWDIETGQQTVGFAGHS 140
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R ++ + D +I +W+ + T IG++ N VAF
Sbjct: 141 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF---------IGHESDINAVAF- 190
Query: 292 CDNGTLIVKIGNSSGCDSVNC 312
NG ++G D C
Sbjct: 191 FPNGYAF-----TTGSDDATC 206
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 237 (88.5 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 61/252 (24%), Positives = 118/252 (46%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ + ++ +++ FHPT ++ SG I+ S T + +T S + T +
Sbjct: 247 ERHYFNQNSKLRCAAFHPTSNLLVVGFSSGLFGIYELPSFTMLYQLSITQSNIDTLTVNS 306
Query: 70 REHWIVCGSDDKF-IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
WI GS + V+++ + + V + ++H D + +L ++T +DD IK+W
Sbjct: 307 TGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVW 366
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
D + C TF H+ V F+ + N S+SLDG+++ W++ T A +
Sbjct: 367 DMNSGF-CIVTFTQHTSAVSGLCFSKRG-NVLFSSSLDGSVRAWDLIRYRNFRTFTAPSR 424
Query: 189 -GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+CI S ++ D F + +W +T ++ L GH V+++ F+ ++
Sbjct: 425 VQFSCIAVD-PSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLA 483
Query: 248 TASEDGTILIWN 259
+ S D T+ IW+
Sbjct: 484 SGSWDKTVRIWD 495
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 60/273 (21%), Positives = 122/273 (44%)
Query: 2 ETPLELQIEKEFIQKSDRVKSVDFHPTQPWV-LASLYSGTVCIWNYHSQTTEKSVKVTDS 60
E P + + I +S+ + ++ + T W+ + S G + +W + S++ +
Sbjct: 282 ELPSFTMLYQLSITQSN-IDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYD 340
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
+ T ++ + I+ G+DD I+V+D N+ + F H + L + ++S
Sbjct: 341 ALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSS 400
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQS-AFNPKDLNTFASASLDGTIQIWNMDSSAA 179
D ++ WD + + +TF S A +P A + I +W++ +
Sbjct: 401 LDGSVRAWDLIR-YRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQL 459
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
TL HE ++ + + S L +GS D TV++WD +++ + ++V ++ F
Sbjct: 460 LETLAGHEGPVSSLSF--NSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAF 517
Query: 240 HPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
HP+ + + AS DG + WN + Q +L G
Sbjct: 518 HPDGKEVCVASLDGQLTFWNVQEGK-QTSLIDG 549
Score = 159 (61.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 39/168 (23%), Positives = 75/168 (44%)
Query: 104 IRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASA 163
+R A HPT ++ L +++ Q S+ + + D S+
Sbjct: 257 LRCAAFHPTSNLLVVGFSSGLFGIYELPSFTMLYQLSITQSNIDTLTVNSTGDWIAIGSS 316
Query: 164 SLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC 223
L G + +W S + +H ++ + Y +SD +ITG+DD +KVWD + C
Sbjct: 317 KL-GQLLVWEWQSESYVLKQQSHYDALSTLQY--SSDGQRIITGADDGKIKVWDMNSGFC 373
Query: 224 VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
+ HT+ V+ +CF ++ ++S DG++ W+ +R T ++
Sbjct: 374 IVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTA 421
>UNIPROTKB|F1S2K2 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GeneTree:ENSGT00390000004228
OMA:QFEGHTK EMBL:CU694283 Ensembl:ENSSSCT00000015368 Uniprot:F1S2K2
Length = 518
Score = 233 (87.1 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 74/303 (24%), Positives = 141/303 (46%)
Query: 2 ETPLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP 61
+TP+++ KEF V VDF P P+ A S + I+ +SQ K+
Sbjct: 30 KTPVQI---KEF----GAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDT 82
Query: 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD 121
A F ++ GS+D +++FD + A +++FE H + ++ V++ +D
Sbjct: 83 AYCATFRQDGRLLIAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGAD 142
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVM---QSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
D +KLWD + E TF+ HS YV S NP DL F + S D T+++++ ++
Sbjct: 143 DYTVKLWDIPNSKEIL-TFKEHSDYVRCGCASKLNP-DL--FVTGSYDHTVKMFDARTNQ 198
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKTCVQILEGHTNNVTAV 237
+ +++ H + + + F + L+ + VKVWD + + L+ H VT +
Sbjct: 199 SVISVE-HGQPVESVLLFPSGG---LLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTVTCL 254
Query: 238 CFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
C + +++ S D + +++ T++++ ++ + S+ + G NG L
Sbjct: 255 CLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAAS-ILSLALAHEDETIVVGMTNGIL 313
Query: 298 IVK 300
VK
Sbjct: 314 SVK 316
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 233 (87.1 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 65/232 (28%), Positives = 115/232 (49%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L ++ IW+ QT E +T E IV GS D +RV+D N+
Sbjct: 238 IISGLRDNSIKIWD--KQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSG 295
Query: 92 ASVKEFEAHEDYIRSLAVHPTF--PFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYV 147
+ H + + +H F ++T S D+ I +WD + + + GH V
Sbjct: 296 EVLNTLIHHNEAV----LHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAV 351
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++G
Sbjct: 352 NVVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSG 404
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
S D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 405 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 454
Score = 179 (68.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 63/233 (27%), Positives = 110/233 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ +S ++ + V +F + C S D+ I V+D MAS +
Sbjct: 286 TVRVWDVNSGEVLNTLIHHNEAVLHLRF-CNGLMVTC-SKDRSIAVWD---MASPTDISL 340
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 341 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 397
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 398 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 452
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 453 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 503
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +I+G D ++K+WD +T C++IL GHT +V +C + R+
Sbjct: 224 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSV--LCLQYDERV 277
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ + + NTL E V + + G
Sbjct: 278 IVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNG 316
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 46/185 (24%), Positives = 87/185 (47%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD ++ EC + GH+ V+ + D + S D T+++W+++
Sbjct: 238 IISGLRDNSIKIWD-KQTLECLKILTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 293
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
S TL H + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 294 SGEVLNTLIHHNEAVLHLRFC----NGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRA 349
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 350 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 405
Query: 293 DNGTL 297
+ T+
Sbjct: 406 SDNTI 410
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 50/186 (26%), Positives = 84/186 (45%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR--EHWIVCGSDDKFIRVFDYNTMASVKEF 97
++ +W+ S T + S++ R A V + +IV S D+ I+V+ +T V+
Sbjct: 326 SIAVWDMASPT-DISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 384
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDL 157
H+ I L V++ S D I+LWD E C + EGH V F+ K +
Sbjct: 385 NGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKRI 441
Query: 158 NTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDFT 212
S + DG I++W++ D A TL + F + D+ +I+ S D T
Sbjct: 442 ---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 498
Query: 213 VKVWDY 218
+ +WD+
Sbjct: 499 ILIWDF 504
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 232 (86.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 65/232 (28%), Positives = 118/232 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFI-RVFDYN 89
+++ L ++ IW+ +T+ + +KV + + E IV GS D + RV+D N
Sbjct: 233 IISGLRDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVSRVWDVN 289
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYV 147
T + H + + L + ++T S D+ I +WD + T + GH V
Sbjct: 290 TGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 347
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++G
Sbjct: 348 NVVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSG 400
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
S D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 401 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 450
Score = 173 (66.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 57/199 (28%), Positives = 97/199 (48%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWD 129
+ C S D+ I V+D MAS + + AV+ F ++++AS D+ IK+W
Sbjct: 315 VTC-SKDRSIAVWD---MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 370
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
E +T GH + + +D S S D TI++W+++ A L+ HE+
Sbjct: 371 -TSTCEFVRTLNGHKRGI--ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEEL 426
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYE---------TKTCVQILEGHTNNVTAVCFH 240
+ CI + D +++G+ D +KVWD + + C++ L H+ V + F
Sbjct: 427 VRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD 482
Query: 241 PELRIIITASEDGTILIWN 259
E +II ++S D TILIW+
Sbjct: 483 -EFQII-SSSHDDTILIWD 499
Score = 154 (59.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 46/186 (24%), Positives = 90/186 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI-QIWNM 174
+++ D IK+WD + + EC + GH+ V+ + D + S D T+ ++W++
Sbjct: 233 IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVSRVWDV 288
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHT 231
++ TL H + + + + S+ + ++T S D ++ VWD + T + ++L GH
Sbjct: 289 NTGEVLNTLIHHNEAVLHLRF---SNGL-MVTCSKDRSIAVWDMASPTDITLRRVLVGHR 344
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 345 AAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSG 400
Query: 292 CDNGTL 297
+ T+
Sbjct: 401 SSDNTI 406
Score = 153 (58.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y D +I+G D ++K+WD + C+++L GHT +V +C + R+
Sbjct: 219 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 272
Query: 246 IITASEDGTIL-IWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ T + NTL E V + + G
Sbjct: 273 IVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 312
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 40 TVCIWNYHSQT--TEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96
++ +W+ S T T + V V + V F + +IV S D+ I+V+ +T V+
Sbjct: 322 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRT 379
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H+ I L V++ S D I+LWD E C + EGH V F+ K
Sbjct: 380 LNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKR 436
Query: 157 LNTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDF 211
+ S + DG I++W++ D A TL + F + D+ +I+ S D
Sbjct: 437 I---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDD 493
Query: 212 TVKVWDY 218
T+ +WD+
Sbjct: 494 TILIWDF 500
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 226 (84.6 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 65/220 (29%), Positives = 112/220 (50%)
Query: 94 VKEFEAHEDYIRSLAVHPTF-PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAF 152
++ F+ H ++S+ +PT LT+S D +KLW ++ +TF+ H++ V Q+ +
Sbjct: 99 IRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRP-ASVRTFKEHAYCVYQAVW 157
Query: 153 NPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
NPK + FASAS D T++IW++ + + AH+ I D+ D + L T S D T
Sbjct: 158 NPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCI-LATSSVDKT 216
Query: 213 VKVWDYET-KTCVQILEGHTNNVTAVCFHPELR-IIITASEDGTILIWNATTFRLQNTLS 270
VKVWD + + + +L GH V V F P R +I + S D ++ +W+ + +++ L
Sbjct: 217 VKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD---YMVEDAL- 272
Query: 271 SGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSV 310
+G + A G D L+ + S+G D +
Sbjct: 273 --------VGRYDHHTEFAVGIDMSVLVEGLMASTGWDEL 304
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 54/210 (25%), Positives = 91/210 (43%)
Query: 11 KEFIQKSDRVKSVDFHPTQ-PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
+ F + + V+SVD++PT+ L S + TV +W + ++ K V A +
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNP 159
Query: 70 REHWIVCG-SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKL 127
+ + S D +R++D S AH+ I S + +L T+S DK +K+
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKV 219
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN-MDSSAAKFTLDAH 186
WD GH + V + F+P + AS S D ++ +W+ M A D H
Sbjct: 220 WDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVEDALVGRYDHH 279
Query: 187 EKGINCIDYFITSDKVYLITGSDDFTVKVW 216
+ ID + + + TG D+ V VW
Sbjct: 280 TEFAVGIDMSVLVEGLMASTGWDEL-VYVW 308
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 233 (87.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 68/244 (27%), Positives = 118/244 (48%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ + + + V ++ R I+ GS D +RV+D T
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRV--IISGSSDATVRVWDVETG 292
Query: 92 ASVKEFEAHEDYIRSLAVHPTFP--FVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYV 147
+K H + + +H F ++T S D+ I +WD + T + GH V
Sbjct: 293 ECIKTLIHHCEAV----LHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAV 348
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
F+ + + SAS D TI++W+MD+ TL H +GI C+ Y ++ +++G
Sbjct: 349 NVVDFDDRYI---VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY---RGRL-VVSG 401
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
S D T+++WD + C+++LEGH V + F E RI+ + + DG I +W+
Sbjct: 402 SSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD-EKRIV-SGAYDGKIKVWDLQAALDPR 459
Query: 268 TLSS 271
LSS
Sbjct: 460 ALSS 463
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 61/241 (25%), Positives = 113/241 (46%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ TV +W+ + K++ V +F A + C S D+ I V+D M
Sbjct: 275 IISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF-ANGIMVTC-SKDRSIAVWD---M 329
Query: 92 ASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
S ++ + AV+ F ++++AS D+ IK+W + E +T GH +
Sbjct: 330 VSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMD-TLEFVRTLAGHRRGI 388
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
+ + S S D TI++W++ S L+ HE+ + CI + D+ +++G
Sbjct: 389 ACLQYRGR---LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF----DEKRIVSG 441
Query: 208 SDDFTVKVWDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
+ D +KVWD + ++ C+ L HT V + F + +I+ ++S D TILIW
Sbjct: 442 AYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFD-DFQIV-SSSHDDTILIW 499
Query: 259 N 259
+
Sbjct: 500 D 500
Score = 165 (63.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD K++ C++ GH+ V+ + D S S D T+++W+++
Sbjct: 235 IVSGLRDNTIKIWD-RKDYSCSRILSGHTGSVLCLQY---DNRVIISGSSDATVRVWDVE 290
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK---TCVQILEGHTN 232
+ TL H + + + + ++ + ++T S D ++ VWD + T ++L GH
Sbjct: 291 TGECIKTLIHHCEAVLHLRF---ANGI-MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRA 346
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F R I++AS D TI +W+ T TL+ + + Y+ G V+
Sbjct: 347 AVNVVDFDD--RYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR-GRLVVSGSS 403
Query: 293 DN 294
DN
Sbjct: 404 DN 405
Score = 157 (60.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y DK+ ++G D T+K+WD + +C +IL GHT +V +C + R+
Sbjct: 221 NSKGVYCLQY--DDDKI--VSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRV 274
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
II+ S D T+ +W+ T TL E V + + G
Sbjct: 275 IISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANG 313
Score = 147 (56.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D + S D TI+IW+ + L H + C+ Y D +I+GS D TV+V
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY----DNRVIISGSSDATVRV 286
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLER 275
WD ET C++ L H V + F I++T S+D +I +W+ + R + R
Sbjct: 287 WDVETGECIKTLIHHCEAVLHLRFANG--IMVTCSKDRSIAVWDMVSPR-----DITIRR 339
Query: 276 VWSIGYKKGSNQVAF 290
V +G++ N V F
Sbjct: 340 VL-VGHRAAVNVVDF 353
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
+ +IV S D+ I+V+ +T+ V+ H I L V++ S D I+LWD
Sbjct: 355 DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRL--VVSGSSDNTIRLWDI 412
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
C + EGH V F+ K + S + DG I++W++ ++ L +
Sbjct: 413 HSG-VCLRVLEGHEELVRCIRFDEKRI---VSGAYDGKIKVWDLQAALDPRALSSEICLC 468
Query: 191 NCIDY----F-ITSDKVYLITGSDDFTVKVWDY 218
+ + + F + D +++ S D T+ +WD+
Sbjct: 469 SLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDF 501
Score = 44 (20.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 12/60 (20%), Positives = 21/60 (35%)
Query: 80 DKFIRVFDYNTMASVKEF---EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
DK + + + V F D+I +L H + + D L + +W C
Sbjct: 57 DKIVHRLSHYQLGKVDNFIRPMLQRDFISNLPAHLVELILFNVNSDSLKSCEEVSTSWRC 116
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 233 (87.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 68/244 (27%), Positives = 118/244 (48%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L T+ IW+ + + + V ++ R I+ GS D +RV+D T
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRV--IISGSSDATVRVWDVETG 292
Query: 92 ASVKEFEAHEDYIRSLAVHPTFP--FVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYV 147
+K H + + +H F ++T S D+ I +WD + T + GH V
Sbjct: 293 ECIKTLIHHCEAV----LHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAV 348
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
F+ + + SAS D TI++W+MD+ TL H +GI C+ Y ++ +++G
Sbjct: 349 NVVDFDDRYI---VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY---RGRL-VVSG 401
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
S D T+++WD + C+++LEGH V + F E RI+ + + DG I +W+
Sbjct: 402 SSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD-EKRIV-SGAYDGKIKVWDLQAALDPR 459
Query: 268 TLSS 271
LSS
Sbjct: 460 ALSS 463
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 61/241 (25%), Positives = 113/241 (46%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ TV +W+ + K++ V +F A + C S D+ I V+D M
Sbjct: 275 IISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF-ANGIMVTC-SKDRSIAVWD---M 329
Query: 92 ASVKEFEAHEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
S ++ + AV+ F ++++AS D+ IK+W + E +T GH +
Sbjct: 330 VSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMD-TLEFVRTLAGHRRGI 388
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
+ + S S D TI++W++ S L+ HE+ + CI + D+ +++G
Sbjct: 389 ACLQYRGR---LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF----DEKRIVSG 441
Query: 208 SDDFTVKVWDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
+ D +KVWD + ++ C+ L HT V + F + +I+ ++S D TILIW
Sbjct: 442 AYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFD-DFQIV-SSSHDDTILIW 499
Query: 259 N 259
+
Sbjct: 500 D 500
Score = 165 (63.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD K++ C++ GH+ V+ + D S S D T+++W+++
Sbjct: 235 IVSGLRDNTIKIWD-RKDYSCSRILSGHTGSVLCLQY---DNRVIISGSSDATVRVWDVE 290
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK---TCVQILEGHTN 232
+ TL H + + + + ++ + ++T S D ++ VWD + T ++L GH
Sbjct: 291 TGECIKTLIHHCEAVLHLRF---ANGI-MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRA 346
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F R I++AS D TI +W+ T TL+ + + Y+ G V+
Sbjct: 347 AVNVVDFDD--RYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR-GRLVVSGSS 403
Query: 293 DN 294
DN
Sbjct: 404 DN 405
Score = 157 (60.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y DK+ ++G D T+K+WD + +C +IL GHT +V +C + R+
Sbjct: 221 NSKGVYCLQY--DDDKI--VSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRV 274
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
II+ S D T+ +W+ T TL E V + + G
Sbjct: 275 IISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANG 313
Score = 147 (56.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D + S D TI+IW+ + L H + C+ Y D +I+GS D TV+V
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY----DNRVIISGSSDATVRV 286
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLER 275
WD ET C++ L H V + F I++T S+D +I +W+ + R + R
Sbjct: 287 WDVETGECIKTLIHHCEAVLHLRFANG--IMVTCSKDRSIAVWDMVSPR-----DITIRR 339
Query: 276 VWSIGYKKGSNQVAF 290
V +G++ N V F
Sbjct: 340 VL-VGHRAAVNVVDF 353
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
+ +IV S D+ I+V+ +T+ V+ H I L V++ S D I+LWD
Sbjct: 355 DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRL--VVSGSSDNTIRLWDI 412
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
C + EGH V F+ K + S + DG I++W++ ++ L +
Sbjct: 413 HSG-VCLRVLEGHEELVRCIRFDEKRI---VSGAYDGKIKVWDLQAALDPRALSSEICLC 468
Query: 191 NCIDY----F-ITSDKVYLITGSDDFTVKVWDY 218
+ + + F + D +++ S D T+ +WD+
Sbjct: 469 SLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDF 501
Score = 44 (20.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 12/60 (20%), Positives = 21/60 (35%)
Query: 80 DKFIRVFDYNTMASVKEF---EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
DK + + + V F D+I +L H + + D L + +W C
Sbjct: 57 DKIVHRLSHYQLGKVDNFIRPMLQRDFISNLPAHLVELILFNVNSDSLKSCEEVSTSWRC 116
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 230 (86.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 57/226 (25%), Positives = 110/226 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ +S+ + V F R + +V GS D I ++D+ +K +
Sbjct: 242 TVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFG 301
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLW--DWEKNWE-CTQTFEGHSHYVMQSAFNPKD 156
H D + + V + ++++S D ++W D E C GH V ++ K
Sbjct: 302 HTDNVLGVVVSENY--IISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKT 359
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
+AS D T++ W++ + + AH++GI C Y + K ++++GS D T++++
Sbjct: 360 -GLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQY---NGK-FIVSGSSDLTIRIF 414
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ + +++L+GH + + V F+ E I++ DGT+ IWN T
Sbjct: 415 EASSGKLLRMLQGHEDLIRTVRFNDEK--IVSGGYDGTVRIWNFNT 458
Score = 207 (77.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 58/234 (24%), Positives = 109/234 (46%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+V GS D+ + V+D N+ + + H + L +++ S D I +WDW+ N
Sbjct: 234 MVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQ-N 292
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS----AAKFTLDAHEKG 189
+ + GH+ V+ + N S+S D T ++W +D++ A L H
Sbjct: 293 RRPLKVYFGHTDNVLGVVVSE---NYIISSSRDHTARVWRLDATSPAEACMHVLRGHLAS 349
Query: 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249
+N + Y +S ++T S D T++ WD T C++I+ H + C + I++
Sbjct: 350 VNSVQY--SSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIA--CAQYNGKFIVSG 405
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
S D TI I+ A++ +L L + + ++ + ++ G +GT V+I N
Sbjct: 406 SSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFN--DEKIVSGGYDGT--VRIWN 455
Score = 160 (61.4 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 50/190 (26%), Positives = 90/190 (47%)
Query: 81 KFIRVFDYNTMASVKEFEAHEDYIRSL----AVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
+F+ V +N S++ F A +D+ +L V +++ S D+ + +WD +
Sbjct: 198 RFL-VSTFNN-PSIR-FPADQDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFIL 254
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+ + GHS V+ F + N S S D TI IW+ + H + +
Sbjct: 255 YKLY-GHSGSVLCLDFCRRR-NLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGV--- 309
Query: 197 ITSDKVYLITGSDDFTVKVWDYET----KTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ S+ Y+I+ S D T +VW + + C+ +L GH +V +V + + +I+TAS D
Sbjct: 310 VVSEN-YIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSD 368
Query: 253 GTILIWNATT 262
T+ W+ TT
Sbjct: 369 RTLRTWDITT 378
Score = 159 (61.0 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 59/250 (23%), Positives = 108/250 (43%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV-KVTDSPVRTAKFVAREHWIV 75
S V +DF + +++ T+ IW++ ++ K TD+ + V E++I+
Sbjct: 261 SGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGV---VVSENYII 317
Query: 76 CGSDDKFIRVFDYNTM----ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
S D RV+ + A + H + S+ ++TAS D+ ++ WD
Sbjct: 318 SSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDIT 377
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
C + H + + +N K + S S D TI+I+ S L HE I
Sbjct: 378 TG-HCIRIIHAHQRGIACAQYNGKFI---VSGSSDLTIRIFEASSGKLLRMLQGHEDLIR 433
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDYET--KTCVQILEGHTNNVTAVCFHPELRIIITA 249
+ + +K+ ++G D TV++W++ T + CV + + V + F + R II
Sbjct: 434 TVRF--NDEKI--VSGGYDGTVRIWNFNTGEQHCV-LHNSRNSRVFGLQF--DHRRIIAC 486
Query: 250 SEDGTILIWN 259
+ IL+WN
Sbjct: 487 THSSEILVWN 496
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 231 (86.4 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 65/235 (27%), Positives = 108/235 (45%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + S V S+ + +LA+ G C +W+ +Q + +P+ + +
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLAT--GGDDCRVNVWSV-AQLRHDLLTGHTTPIESLQI 70
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
A+E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 71 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 130
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C ++ H+ V F+P D ASA+ D T+++W++ + F H
Sbjct: 131 WDVRRKG-CIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 188
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
+N ++ F S + L +GS T++ WD E V +E V + F+P+
Sbjct: 189 GPVNVVE-FHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPD 242
Score = 189 (71.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 50/195 (25%), Positives = 88/195 (45%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKE--FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
+ G DD + V+ ++A ++ H I SL + ++ S I++WD E
Sbjct: 36 LATGGDDCRVNVW---SVAQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 92
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
+ +T GH + F+P + AS SLD I++W++ F +H + +
Sbjct: 93 AA-KILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVR 150
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA-S 250
C+ + + D +L + +DD TVK+WD + GH V V FHP + ++ + S
Sbjct: 151 CLRF--SPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGS 208
Query: 251 EDGTILIWNATTFRL 265
TI W+ F +
Sbjct: 209 SSMTIRFWDLEKFHV 223
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 42/173 (24%), Positives = 83/173 (47%)
Query: 90 TMASVKEFEAHEDYIRSLAV-HPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
T ++E AH + SL + T + T DD + +W + T GH+ +
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDLLT--GHTTPIE 66
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
+ K+ + S G+I++W+++++ TL H+ I +D+ ++ +GS
Sbjct: 67 SLQISAKE-ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS--FVASGS 123
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
D +K+WD K C+ + HT V + F P+ + + +A++D T+ +W+ T
Sbjct: 124 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLT 176
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 48/226 (21%), Positives = 101/226 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
++S+ + ++A SG++ +W+ + +++ + + + F ++ GS
Sbjct: 65 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 124
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D + ++++H +R L P ++ +A+DD +KLWD +
Sbjct: 125 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG-KVMFE 183
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH V F+P AS S TI+ W+++ ++ + CI
Sbjct: 184 FTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCI--LFNP 241
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT--AVCFHPEL 243
D L G D +++V+ +E + C ++ + V +VC H +L
Sbjct: 242 DGCCLYGGFQD-SLRVYGWEPERCFDVVVVNWGKVADLSVC-HNQL 285
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 225 (84.3 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 57/216 (26%), Positives = 99/216 (45%)
Query: 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP 154
K F+ H ++ + + + L+AS D+ ++LWD E E TQ F GH V+ +
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETG-ETTQRFVGHKGDVLSVSI-A 117
Query: 155 KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVK 214
K+L SAS D T+++WN TL H ++ + + +I+ S D TVK
Sbjct: 118 KNLRQIVSASRDKTVKVWNTIGECMA-TLTGHNDWVSAVRISPSDQSSTVISASWDKTVK 176
Query: 215 VWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLE 274
WD + GHT ++ + P+ + +A +DG I++W+ + TL + E
Sbjct: 177 SWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE 236
Query: 275 RVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSV 310
V ++ + +A +G I K+ S D +
Sbjct: 237 -VHALAFSPNRYWLAAATTSGIKIFKLQERSLLDEL 271
Score = 176 (67.0 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 58/231 (25%), Positives = 104/231 (45%)
Query: 52 EKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP 111
+KS K V+ A + + S D+ +R++D T + + F H+ + S+++
Sbjct: 59 KKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAK 118
Query: 112 TFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN-TFASASLDGTIQ 170
+++AS DK +K+W+ EC T GH+ +V +P D + T SAS D T++
Sbjct: 119 NLRQIVSASRDKTVKVWN--TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVK 176
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
W++ + H I+CI ++ D + D + +WD + LE
Sbjct: 177 SWDLADYSVNADFIGHTGYISCIT--LSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAK 234
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN-TLSSGLERVWSIG 280
V A+ F P + A+ G I I F+LQ +L L+ +++G
Sbjct: 235 AE-VHALAFSPNRYWLAAATTSG-IKI-----FKLQERSLLDELKPEFAVG 278
Score = 172 (65.6 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 53/174 (30%), Positives = 86/174 (49%)
Query: 98 EAHEDYIRSLAVHPTFP-FVLTASDDKLI---KLWDWEKNWECT--QTFEGHSHYVMQSA 151
E H ++ SLA P P +L+ S DK + KL E N ++F+GHSH ++Q
Sbjct: 14 EGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSH-IVQDV 72
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
D SAS D T+++W++++ H KG + + I + +++ S D
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGH-KG-DVLSVSIAKNLRQIVSASRDK 130
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHP--ELRIIITASEDGTILIWNATTF 263
TVKVW+ C+ L GH + V+AV P + +I+AS D T+ W+ +
Sbjct: 131 TVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADY 183
Score = 168 (64.2 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 59/248 (23%), Positives = 116/248 (46%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS-QTTEKSVKVTDSPVRTAKFV 68
+K F S V+ V + L++ + T+ +W+ + +TT++ V V +
Sbjct: 59 KKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVG-HKGDVLSVSIA 117
Query: 69 AREHWIVCGSDDKFIRVFDYNTMAS-VKEFEAHEDYIRSLAVHPT--FPFVLTASDDKLI 125
IV S DK ++V +NT+ + H D++ ++ + P+ V++AS DK +
Sbjct: 118 KNLRQIVSASRDKTVKV--WNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTV 175
Query: 126 KLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDA 185
K WD ++ F GH+ Y+ +P D + ASA DG I +W+++ + +TL+A
Sbjct: 176 KSWDLA-DYSVNADFIGHTGYISCITLSP-DGSLCASAGKDGVIILWDLNKNKTLYTLEA 233
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ ++ + + S Y + + +K++ + ++ + L+ V A PE I
Sbjct: 234 KAE-VHALAF---SPNRYWLAAATTSGIKIFKLQERSLLDELKPEFA-VGATAKDPEA-I 287
Query: 246 IITASEDG 253
+ S DG
Sbjct: 288 SLAWSADG 295
Score = 157 (60.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 40/125 (32%), Positives = 62/125 (49%)
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA-KFTLDAHE-KGINCI--D 194
T EGH+ +V A P + S S D T+ W + ++ + KG + I D
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 195 YFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGT 254
I++D Y ++ S D T+++WD ET Q GH +V +V LR I++AS D T
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKT 131
Query: 255 ILIWN 259
+ +WN
Sbjct: 132 VKVWN 136
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 52/218 (23%), Positives = 87/218 (39%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTD--SPVRTAKFV 68
+ F+ V SV ++++ TV +WN + D S VR +
Sbjct: 102 QRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPS- 160
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ ++ S DK ++ +D + +F H YI + + P +A D +I LW
Sbjct: 161 DQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILW 220
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM------DSSAAKFT 182
D KN + T E + V AF+P A+A+ G I+I+ + D +F
Sbjct: 221 DLNKN-KTLYTLEAKAE-VHALAFSPNRY-WLAAATTSG-IKIFKLQERSLLDELKPEFA 276
Query: 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET 220
+ A K I ++D L G D ++VW T
Sbjct: 277 VGATAKDPEAISLAWSADGQNLFAGYTDNVIRVWQVMT 314
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 225 (84.3 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 57/216 (26%), Positives = 99/216 (45%)
Query: 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP 154
K F+ H ++ + + + L+AS D+ ++LWD E E TQ F GH V+ +
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETG-ETTQRFVGHKGDVLSVSI-A 117
Query: 155 KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVK 214
K+L SAS D T+++WN TL H ++ + + +I+ S D TVK
Sbjct: 118 KNLRQIVSASRDKTVKVWNTIGECMA-TLTGHNDWVSAVRISPSDQSSTVISASWDKTVK 176
Query: 215 VWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLE 274
WD + GHT ++ + P+ + +A +DG I++W+ + TL + E
Sbjct: 177 SWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE 236
Query: 275 RVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSV 310
V ++ + +A +G I K+ S D +
Sbjct: 237 -VHALAFSPNRYWLAAATTSGIKIFKLQERSLLDEL 271
Score = 176 (67.0 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 58/231 (25%), Positives = 104/231 (45%)
Query: 52 EKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP 111
+KS K V+ A + + S D+ +R++D T + + F H+ + S+++
Sbjct: 59 KKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAK 118
Query: 112 TFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN-TFASASLDGTIQ 170
+++AS DK +K+W+ EC T GH+ +V +P D + T SAS D T++
Sbjct: 119 NLRQIVSASRDKTVKVWN--TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVK 176
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
W++ + H I+CI ++ D + D + +WD + LE
Sbjct: 177 SWDLADYSVNADFIGHTGYISCIT--LSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAK 234
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN-TLSSGLERVWSIG 280
V A+ F P + A+ G I I F+LQ +L L+ +++G
Sbjct: 235 AE-VHALAFSPNRYWLAAATTSG-IKI-----FKLQERSLLDELKPEFAVG 278
Score = 172 (65.6 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 53/174 (30%), Positives = 86/174 (49%)
Query: 98 EAHEDYIRSLAVHPTFP-FVLTASDDKLI---KLWDWEKNWECT--QTFEGHSHYVMQSA 151
E H ++ SLA P P +L+ S DK + KL E N ++F+GHSH ++Q
Sbjct: 14 EGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSH-IVQDV 72
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
D SAS D T+++W++++ H KG + + I + +++ S D
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGH-KG-DVLSVSIAKNLRQIVSASRDK 130
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHP--ELRIIITASEDGTILIWNATTF 263
TVKVW+ C+ L GH + V+AV P + +I+AS D T+ W+ +
Sbjct: 131 TVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADY 183
Score = 168 (64.2 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 59/248 (23%), Positives = 116/248 (46%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS-QTTEKSVKVTDSPVRTAKFV 68
+K F S V+ V + L++ + T+ +W+ + +TT++ V V +
Sbjct: 59 KKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVG-HKGDVLSVSIA 117
Query: 69 AREHWIVCGSDDKFIRVFDYNTMAS-VKEFEAHEDYIRSLAVHPT--FPFVLTASDDKLI 125
IV S DK ++V +NT+ + H D++ ++ + P+ V++AS DK +
Sbjct: 118 KNLRQIVSASRDKTVKV--WNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTV 175
Query: 126 KLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDA 185
K WD ++ F GH+ Y+ +P D + ASA DG I +W+++ + +TL+A
Sbjct: 176 KSWDLA-DYSVNADFIGHTGYISCITLSP-DGSLCASAGKDGVIILWDLNKNKTLYTLEA 233
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ ++ + + S Y + + +K++ + ++ + L+ V A PE I
Sbjct: 234 KAE-VHALAF---SPNRYWLAAATTSGIKIFKLQERSLLDELKPEFA-VGATAKDPEA-I 287
Query: 246 IITASEDG 253
+ S DG
Sbjct: 288 SLAWSADG 295
Score = 157 (60.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 40/125 (32%), Positives = 62/125 (49%)
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA-KFTLDAHE-KGINCI--D 194
T EGH+ +V A P + S S D T+ W + ++ + KG + I D
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 195 YFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGT 254
I++D Y ++ S D T+++WD ET Q GH +V +V LR I++AS D T
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKT 131
Query: 255 ILIWN 259
+ +WN
Sbjct: 132 VKVWN 136
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 52/218 (23%), Positives = 87/218 (39%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTD--SPVRTAKFV 68
+ F+ V SV ++++ TV +WN + D S VR +
Sbjct: 102 QRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPS- 160
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ ++ S DK ++ +D + +F H YI + + P +A D +I LW
Sbjct: 161 DQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILW 220
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM------DSSAAKFT 182
D KN + T E + V AF+P A+A+ G I+I+ + D +F
Sbjct: 221 DLNKN-KTLYTLEAKAE-VHALAFSPNRY-WLAAATTSG-IKIFKLQERSLLDELKPEFA 276
Query: 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET 220
+ A K I ++D L G D ++VW T
Sbjct: 277 VGATAKDPEAISLAWSADGQNLFAGYTDNVIRVWQVMT 314
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 229 (85.7 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 73/281 (25%), Positives = 127/281 (45%)
Query: 32 VLASL-YSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR--EHWIVCGSDDKFIRVFDY 88
+LA+ SG +W Q T + D R V + + S D+ +++
Sbjct: 269 ILATCSLSGVTKLWEM-PQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT 327
Query: 89 NTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
+ ++ FE H D + +A HP+ ++ T S DK +LWD E EGHS V
Sbjct: 328 DGTL-LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQ-EGHSRSVY 385
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
AF +D AS LD ++W++ + + H K + +++ + + +L +G
Sbjct: 386 GIAFQ-QDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNF--SPNGYHLASGG 442
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP-ELRIIITASEDGTILIWNATTFRLQN 267
+D ++WD + + I+ H N V+ V + P E + TAS D + IW+ F L
Sbjct: 443 EDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVK 502
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCD 308
+L+ +V S+ S+ +A + T +K+ SSG D
Sbjct: 503 SLAGHESKVASLDITADSSCIATVSHDRT--IKLWTSSGND 541
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 57/244 (23%), Positives = 97/244 (39%)
Query: 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG 77
+R V F P + + T +W + D R A F ++
Sbjct: 299 ERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVA-FHPSGKYLGTT 357
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT 137
S DK R++D NT A + E H + +A + D L ++WD +
Sbjct: 358 SYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDL-RTGRSI 416
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197
F+GH V F+P + AS D +IW++ + + + AH ++ + Y
Sbjct: 417 LVFQGHIKPVFSVNFSPNGYH-LASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYE- 474
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
+ +L T S D V +W + V+ L GH + V ++ + I T S D TI +
Sbjct: 475 PQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKL 534
Query: 258 WNAT 261
W ++
Sbjct: 535 WTSS 538
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 155 KDLNTFASASLDGTIQIWNMDSSAAKFTL--DAHEKGINCIDYFITSDKVYLITGSDDFT 212
+D A+ SL G ++W M + D E+ + + F D L T S D T
Sbjct: 265 RDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVV--FSPVDDC-LATASADRT 321
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
K+W + T +Q EGH + + V FHP + + T S D T +W+ T + L G
Sbjct: 322 AKLWKTDG-TLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINT-GAELLLQEG 379
Query: 273 LER-VWSIGYKK-GSNQVAFGCDN 294
R V+ I +++ G+ + G D+
Sbjct: 380 HSRSVYGIAFQQDGALAASCGLDS 403
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 229 (85.7 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 64/227 (28%), Positives = 101/227 (44%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + + V S+ +LA+ G C +W+ + S+ SPV + +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C + GHS V F+P D ASA+ D T+++W++ + H
Sbjct: 132 WDIRRKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNV 234
+N +++ ++ L +GS D T++ WD E V +EG V
Sbjct: 190 GPVNVVEFH--PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Score = 216 (81.1 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 56/227 (24%), Positives = 96/227 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G DD + ++ N + H + S+ ++ ++ S I++WD E
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P AS S D I++W++ F H + + C+
Sbjct: 96 -KILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG 253
+ + D +L + +DD TVK+WD + GHT V V FHP ++ + S D
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 254 TILIWNATTFRLQNTLSS--GLERV---WSIGYKKGSNQVAFGCDNG 295
TI W+ F++ + + G R W +G V GC G
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLSPPPKVV--GCRYG 256
Score = 204 (76.9 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 52/210 (24%), Positives = 99/210 (47%)
Query: 90 TMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVM 148
T ++E AH + SL + +L T DD + LW K C + GH+ V
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVE 67
Query: 149 QSAFN-PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
N P++L + S G+I++W+++++ TL H+ I +D+ + ++ +G
Sbjct: 68 SVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASG 123
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
S D +K+WD K CV GH+ V + F P+ + + +A++D T+ +W+ T ++ +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
V + + +A G + T+
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 126 (49.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/123 (24%), Positives = 54/123 (43%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH ++ + S ++ L TG DD V +W C+ L GHT+ V +V +
Sbjct: 18 AHASNVSSLVLGKASGRL-LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304
+I+ S+ G+I +W+ ++ TL + S+ + VA G + + +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 305 SGC 307
GC
Sbjct: 137 KGC 139
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 228 (85.3 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 51/174 (29%), Positives = 91/174 (52%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
+S +H D + +A HP F + + S+D IK+WDWE E +T +GH V
Sbjct: 105 SSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELG-EIERTLKGHIRGVSGLD 163
Query: 152 FNPKDLNTF-ASASLDGTIQIWNMDSSAAKF-TLDAHEKGINCIDYFITSDKVYLITGSD 209
+ + NT AS S D TI++W+ A TL H+ ++ + F+TS+ +LI+ S
Sbjct: 164 YGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVR-FLTSNDNHLISASR 222
Query: 210 DFTVKVWDYETKTCVQILEGHTNN-VTAVCFHPELRIIITASEDGTILIWNATT 262
D T+++WD T CV++++ T + + V + + +++ D I +W ++
Sbjct: 223 DGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Score = 180 (68.4 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 47/151 (31%), Positives = 73/151 (48%)
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+W T T H V AF+P + AS S D TI+IW+ + + TL H +
Sbjct: 99 NWLPKPSSTHTLTSHRDAVTCVAFHPV-FTSLASGSEDCTIKIWDWELGEIERTLKGHIR 157
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC-VQILEGHTNNVTAVCFHPEL-RII 246
G++ +DY L + S D T+K+WD ++ L GH ++V++V F +
Sbjct: 158 GVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHL 217
Query: 247 ITASEDGTILIWNATTFRLQNTLSSGLERVW 277
I+AS DGT+ IW+ +T + S E W
Sbjct: 218 ISASRDGTLRIWDVSTGFCVKVIKSATES-W 247
Score = 169 (64.5 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 49/171 (28%), Positives = 75/171 (43%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS--DDKLIKLWDWE 131
+ GS+D I+++D+ + + H + L L AS D IKLWD
Sbjct: 129 LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPS 188
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS-AAKFTLDAHEKGI 190
K++ +T GH H V F + N SAS DGT++IW++ + K A E I
Sbjct: 189 KDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWI 248
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
D + D +L++G D + VW+ + L GH N + F P
Sbjct: 249 R--DVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAP 297
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
++ G+ DK I++++ +K H++++R L HP ++ + SDDK I+ WD +
Sbjct: 322 FVATGARDKTIKLWEARGRL-IKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 133 NWECTQTFEG-HSHYV 147
+T G H H+V
Sbjct: 381 EGRLVKTISGAHEHFV 396
Score = 114 (45.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
TS ++ TG+ D T+K+W+ + ++ L GH N V + FHP + + + S+D TI
Sbjct: 317 TSSCEFVATGARDKTIKLWEARGRL-IKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRC 375
Query: 258 WNATTF-RLQNTLSSGLE 274
W+ + RL T+S E
Sbjct: 376 WDLSQEGRLVKTISGAHE 393
Score = 113 (44.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 42/183 (22%), Positives = 80/183 (43%)
Query: 18 DRVKSVDFHPTQPWVLASLYSG----TVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE-H 72
D V V FHP V SL SG T+ IW++ E+++K V + ++ +
Sbjct: 115 DAVTCVAFHP----VFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGN 170
Query: 73 WIVCG-SDDKFIRVFDYNT-MASVKEFEAHEDYIRSLA-VHPTFPFVLTASDDKLIKLWD 129
++ S D I+++D + A+++ H+ + S+ + +++AS D +++WD
Sbjct: 171 TLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWD 230
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
+ C + + + ++ D S D I +W + S+ K L HE
Sbjct: 231 VSTGF-CVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENF 289
Query: 190 INC 192
I C
Sbjct: 290 IEC 292
Score = 110 (43.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 29/81 (35%), Positives = 39/81 (48%)
Query: 115 FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
FV T + DK IKLW E +T GH ++V F+P F S S D TI+ W++
Sbjct: 322 FVATGARDKTIKLW--EARGRLIKTLHGHDNWVRGLVFHPGGKYLF-SVSDDKTIRCWDL 378
Query: 175 DSSA--AKFTLDAHEKGINCI 193
K AHE ++CI
Sbjct: 379 SQEGRLVKTISGAHEHFVSCI 399
Score = 71 (30.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 20 VKSVDFHPTQP-WVLASLYSGTVCIWNYHSQTTEKSVK-VTDSPVRTAKFVAREHWIVCG 77
V SV F + ++++ GT+ IW+ + K +K T+S +R W+V G
Sbjct: 204 VSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSG 263
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP 111
D+ I V++ ++ HE++I P
Sbjct: 264 GRDQAITVWEVSSAEPKAALLGHENFIECCVFAP 297
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 228 (85.3 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 51/174 (29%), Positives = 91/174 (52%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
+S +H D + +A HP F + + S+D IK+WDWE E +T +GH V
Sbjct: 105 SSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELG-EIERTLKGHIRGVSGLD 163
Query: 152 FNPKDLNTF-ASASLDGTIQIWNMDSSAAKF-TLDAHEKGINCIDYFITSDKVYLITGSD 209
+ + NT AS S D TI++W+ A TL H+ ++ + F+TS+ +LI+ S
Sbjct: 164 YGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVR-FLTSNDNHLISASR 222
Query: 210 DFTVKVWDYETKTCVQILEGHTNN-VTAVCFHPELRIIITASEDGTILIWNATT 262
D T+++WD T CV++++ T + + V + + +++ D I +W ++
Sbjct: 223 DGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Score = 180 (68.4 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 47/151 (31%), Positives = 73/151 (48%)
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+W T T H V AF+P + AS S D TI+IW+ + + TL H +
Sbjct: 99 NWLPKPSSTHTLTSHRDAVTCVAFHPV-FTSLASGSEDCTIKIWDWELGEIERTLKGHIR 157
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC-VQILEGHTNNVTAVCFHPEL-RII 246
G++ +DY L + S D T+K+WD ++ L GH ++V++V F +
Sbjct: 158 GVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHL 217
Query: 247 ITASEDGTILIWNATTFRLQNTLSSGLERVW 277
I+AS DGT+ IW+ +T + S E W
Sbjct: 218 ISASRDGTLRIWDVSTGFCVKVIKSATES-W 247
Score = 169 (64.5 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 49/171 (28%), Positives = 75/171 (43%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS--DDKLIKLWDWE 131
+ GS+D I+++D+ + + H + L L AS D IKLWD
Sbjct: 129 LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPS 188
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS-AAKFTLDAHEKGI 190
K++ +T GH H V F + N SAS DGT++IW++ + K A E I
Sbjct: 189 KDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWI 248
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
D + D +L++G D + VW+ + L GH N + F P
Sbjct: 249 R--DVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAP 297
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
++ G+ DK I++++ +K H++++R L HP ++ + SDDK I+ WD +
Sbjct: 322 FVATGARDKTIKLWEARGRL-IKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 133 NWECTQTFEG-HSHYV 147
+T G H H+V
Sbjct: 381 EGRLVKTISGAHEHFV 396
Score = 114 (45.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
TS ++ TG+ D T+K+W+ + ++ L GH N V + FHP + + + S+D TI
Sbjct: 317 TSSCEFVATGARDKTIKLWEARGRL-IKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRC 375
Query: 258 WNATTF-RLQNTLSSGLE 274
W+ + RL T+S E
Sbjct: 376 WDLSQEGRLVKTISGAHE 393
Score = 113 (44.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 42/183 (22%), Positives = 80/183 (43%)
Query: 18 DRVKSVDFHPTQPWVLASLYSG----TVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE-H 72
D V V FHP V SL SG T+ IW++ E+++K V + ++ +
Sbjct: 115 DAVTCVAFHP----VFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGN 170
Query: 73 WIVCG-SDDKFIRVFDYNT-MASVKEFEAHEDYIRSLA-VHPTFPFVLTASDDKLIKLWD 129
++ S D I+++D + A+++ H+ + S+ + +++AS D +++WD
Sbjct: 171 TLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWD 230
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG 189
+ C + + + ++ D S D I +W + S+ K L HE
Sbjct: 231 VSTGF-CVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENF 289
Query: 190 INC 192
I C
Sbjct: 290 IEC 292
Score = 110 (43.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 29/81 (35%), Positives = 39/81 (48%)
Query: 115 FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
FV T + DK IKLW E +T GH ++V F+P F S S D TI+ W++
Sbjct: 322 FVATGARDKTIKLW--EARGRLIKTLHGHDNWVRGLVFHPGGKYLF-SVSDDKTIRCWDL 378
Query: 175 DSSA--AKFTLDAHEKGINCI 193
K AHE ++CI
Sbjct: 379 SQEGRLVKTISGAHEHFVSCI 399
Score = 71 (30.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 20 VKSVDFHPTQP-WVLASLYSGTVCIWNYHSQTTEKSVK-VTDSPVRTAKFVAREHWIVCG 77
V SV F + ++++ GT+ IW+ + K +K T+S +R W+V G
Sbjct: 204 VSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSG 263
Query: 78 SDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP 111
D+ I V++ ++ HE++I P
Sbjct: 264 GRDQAITVWEVSSAEPKAALLGHENFIECCVFAP 297
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 226 (84.6 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D ++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T F GHS V
Sbjct: 130 EGNVRVSRELPGHTGYL-SCCRFLDDNQIITSSGDTTCALWDIETGQQ-TVGFAGHSGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D TF S + D +I++W++ S + T HE IN + +F + TG
Sbjct: 188 MSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + ++ H N +T+V F R+++ +D IW+A
Sbjct: 245 SDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y +T E +V+V+ + P T +F+ ++ I+ S D ++D T F
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P ++ + D IKLWD + C QTF GH + AF P
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM-CRQTFIGHESDINAVAFFPNGY-A 240
Query: 160 FASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
F + S D T +++++ D ++ D GI + F S ++ L+ G DDF +WD
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA-FSRSGRL-LLAGYDDFNCNIWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 157 (60.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 47/204 (23%), Positives = 85/204 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ FV
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + ++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ H + + + D ++G+ D ++K+WD C Q GH +++
Sbjct: 173 TGQQTVGFAGHSGDVMSLS--LAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 231 AVAFFPNGYAFTTGSDDATCRLFD 254
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 50/201 (24%), Positives = 79/201 (39%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+++
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NFVACGGLDNICSIYSLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D +IT S D T +WD ET GH+
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFL---DDNQIITSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R ++ + D +I +W+ + T IG++ N VAF
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF---------IGHESDINAVAF- 234
Query: 292 CDNGTLIVKIGNSSGCDSVNC 312
NG ++G D C
Sbjct: 235 FPNGYAF-----TTGSDDATC 250
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 226 (84.6 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D ++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T F GHS V
Sbjct: 130 EGNVRVSRELPGHTGYL-SCCRFLDDNQIITSSGDTTCALWDIETGQQ-TVGFAGHSGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D TF S + D +I++W++ S + T HE IN + +F + TG
Sbjct: 188 MSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + ++ H N +T+V F R+++ +D IW+A
Sbjct: 245 SDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y +T E +V+V+ + P T +F+ ++ I+ S D ++D T F
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P ++ + D IKLWD + C QTF GH + AF P
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM-CRQTFIGHESDINAVAFFPNGY-A 240
Query: 160 FASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
F + S D T +++++ D ++ D GI + F S ++ L+ G DDF +WD
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA-FSRSGRL-LLAGYDDFNCNIWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 157 (60.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 47/204 (23%), Positives = 85/204 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ FV
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + ++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ H + + + D ++G+ D ++K+WD C Q GH +++
Sbjct: 173 TGQQTVGFAGHSGDVMSLS--LAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 231 AVAFFPNGYAFTTGSDDATCRLFD 254
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 50/201 (24%), Positives = 79/201 (39%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+++
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NFVACGGLDNICSIYSLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D +IT S D T +WD ET GH+
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFL---DDNQIITSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R ++ + D +I +W+ + T IG++ N VAF
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF---------IGHESDINAVAF- 234
Query: 292 CDNGTLIVKIGNSSGCDSVNC 312
NG ++G D C
Sbjct: 235 FPNGYAF-----TTGSDDATC 250
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 226 (84.6 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D ++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T F GHS V
Sbjct: 130 EGNVRVSRELPGHTGYL-SCCRFLDDNQIITSSGDTTCALWDIETGQQ-TVGFAGHSGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D TF S + D +I++W++ S + T HE IN + +F + TG
Sbjct: 188 MSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + ++ H N +T+V F R+++ +D IW+A
Sbjct: 245 SDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y +T E +V+V+ + P T +F+ ++ I+ S D ++D T F
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P ++ + D IKLWD + C QTF GH + AF P
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM-CRQTFIGHESDINAVAFFPNGY-A 240
Query: 160 FASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
F + S D T +++++ D ++ D GI + F S ++ L+ G DDF +WD
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA-FSRSGRL-LLAGYDDFNCNIWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 157 (60.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 47/204 (23%), Positives = 85/204 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ FV
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + ++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ H + + + D ++G+ D ++K+WD C Q GH +++
Sbjct: 173 TGQQTVGFAGHSGDVMSLS--LAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 231 AVAFFPNGYAFTTGSDDATCRLFD 254
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 50/201 (24%), Positives = 79/201 (39%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+++
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NFVACGGLDNICSIYSLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D +IT S D T +WD ET GH+
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFL---DDNQIITSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R ++ + D +I +W+ + T IG++ N VAF
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF---------IGHESDINAVAF- 234
Query: 292 CDNGTLIVKIGNSSGCDSVNC 312
NG ++G D C
Sbjct: 235 FPNGYAF-----TTGSDDATC 250
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 226 (84.6 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D ++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T F GHS V
Sbjct: 130 EGNVRVSRELPGHTGYL-SCCRFLDDNQIITSSGDTTCALWDIETGQQ-TVGFAGHSGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D TF S + D +I++W++ S + T HE IN + +F + TG
Sbjct: 188 MSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + ++ H N +T+V F R+++ +D IW+A
Sbjct: 245 SDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y +T E +V+V+ + P T +F+ ++ I+ S D ++D T F
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P ++ + D IKLWD + C QTF GH + AF P
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM-CRQTFIGHESDINAVAFFPNGY-A 240
Query: 160 FASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
F + S D T +++++ D ++ D GI + F S ++ L+ G DDF +WD
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA-FSRSGRL-LLAGYDDFNCNIWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 157 (60.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 47/204 (23%), Positives = 85/204 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ FV
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + ++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ H + + + D ++G+ D ++K+WD C Q GH +++
Sbjct: 173 TGQQTVGFAGHSGDVMSLS--LAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 231 AVAFFPNGYAFTTGSDDATCRLFD 254
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 50/201 (24%), Positives = 79/201 (39%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+++
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NFVACGGLDNICSIYSLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D +IT S D T +WD ET GH+
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFL---DDNQIITSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R ++ + D +I +W+ + T IG++ N VAF
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF---------IGHESDINAVAF- 234
Query: 292 CDNGTLIVKIGNSSGCDSVNC 312
NG ++G D C
Sbjct: 235 FPNGYAF-----TTGSDDATC 250
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 226 (84.6 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D ++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T F GHS V
Sbjct: 130 EGNVRVSRELPGHTGYL-SCCRFLDDNQIITSSGDTTCALWDIETGQQ-TVGFAGHSGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D TF S + D +I++W++ S + T HE IN + +F + TG
Sbjct: 188 MSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + ++ H N +T+V F R+++ +D IW+A
Sbjct: 245 SDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y +T E +V+V+ + P T +F+ ++ I+ S D ++D T F
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P ++ + D IKLWD + C QTF GH + AF P
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM-CRQTFIGHESDINAVAFFPNGY-A 240
Query: 160 FASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
F + S D T +++++ D ++ D GI + F S ++ L+ G DDF +WD
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA-FSRSGRL-LLAGYDDFNCNIWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 157 (60.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 47/204 (23%), Positives = 85/204 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ FV
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + ++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ H + + + D ++G+ D ++K+WD C Q GH +++
Sbjct: 173 TGQQTVGFAGHSGDVMSLS--LAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 231 AVAFFPNGYAFTTGSDDATCRLFD 254
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 50/201 (24%), Positives = 79/201 (39%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+++
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NFVACGGLDNICSIYSLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D +IT S D T +WD ET GH+
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFL---DDNQIITSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R ++ + D +I +W+ + T IG++ N VAF
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF---------IGHESDINAVAF- 234
Query: 292 CDNGTLIVKIGNSSGCDSVNC 312
NG ++G D C
Sbjct: 235 FPNGYAF-----TTGSDDATC 250
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 231 (86.4 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 58/217 (26%), Positives = 106/217 (48%)
Query: 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE--KNWECTQTFEGHSHYVMQSAF 152
K F H + + P ++L+ S+D +LW E N C ++GH+ V +F
Sbjct: 673 KTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVC---YKGHNFPVWDVSF 729
Query: 153 NPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
+P FA+AS D T ++W + + H N + + + YL TGS+D +
Sbjct: 730 SPFGFY-FATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNIN--YLATGSNDKS 786
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
++W+ +T CV+I GH + V F P+ R++ TA ED ++++W+ +T + +
Sbjct: 787 ARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGH 846
Query: 273 LERVWSIGYKKGSNQVAFGCDNGTL----IVKIGNSS 305
+ V+S+ + + +A G + T+ + K NSS
Sbjct: 847 TKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSS 883
Score = 217 (81.4 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 52/207 (25%), Positives = 96/207 (46%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K F+ S V F P ++L+ T +W+ + + K + PV F
Sbjct: 673 KTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPF 732
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
+ S D+ R++ N ++ ++ F H ++ HP ++ T S+DK +LW+
Sbjct: 733 GFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEI 792
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
+ +C + F GH + AF+P D A+A D ++ +W++ + +D H K +
Sbjct: 793 QTG-KCVRIFMGHRAPIYTVAFSP-DGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCV 850
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWD 217
+D+ + D L +GS D TV++WD
Sbjct: 851 YSLDF--SCDGSILASGSSDCTVRLWD 875
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 228 (85.3 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 63/232 (27%), Positives = 116/232 (50%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
+++ L ++ IW+ S K + V ++ E IV GS D +RV+D ++
Sbjct: 238 IISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVSSG 295
Query: 92 ASVKEFEAHEDYIRSLAVHPTF--PFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYV 147
+ H + + +H F ++T S D+ I +WD + + + GH V
Sbjct: 296 EVLNTLIHHNEAV----LHLRFCNGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAV 351
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
F+ K + SAS D TI++W+ + TL+ H++GI C+ Y D++ +++G
Sbjct: 352 NVVDFDDKYI---VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRL-VVSG 404
Query: 208 SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
S D T+++WD E C+++LEGH V + F + + I++ + DG I +W+
Sbjct: 405 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 454
Score = 179 (68.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 63/233 (27%), Positives = 109/233 (46%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
TV +W+ S ++ + V +F + C S D+ I V+D MAS +
Sbjct: 286 TVRVWDVSSGEVLNTLIHHNEAVLHLRF-CNGLMVTC-SKDRSIAVWD---MASATDISL 340
Query: 100 HEDYI-RSLAVHPT-FP--FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155
+ AV+ F ++++AS D+ IK+W E +T GH + + +
Sbjct: 341 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS-TSTCEFVRTLNGHKRGI--ACLQYR 397
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
D S S D TI++W+++ A L+ HE+ + CI + D +++G+ D +KV
Sbjct: 398 D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKV 452
Query: 216 WDYE---------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
WD + + C++ L H+ V + F E +II ++S D TILIW+
Sbjct: 453 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII-SSSHDDTILIWD 503
Score = 164 (62.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 46/185 (24%), Positives = 87/185 (47%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+++ D IK+WD +++ EC + GH+ V+ + D + S D T+++W++
Sbjct: 238 IISGLRDNSIKIWD-KQSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVS 293
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV---QILEGHTN 232
S TL H + + + + ++T S D ++ VWD + T + ++L GH
Sbjct: 294 SGEVLNTLIHHNEAVLHLRFC----NGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRA 349
Query: 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292
V V F + I++AS D TI +W+ +T TL+ + + Y+ V G
Sbjct: 350 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 405
Query: 293 DNGTL 297
+ T+
Sbjct: 406 SDNTI 410
Score = 162 (62.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 186 HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245
+ KG+ C+ Y DK+ I+G D ++K+WD ++ C+++L GHT +V +C + R+
Sbjct: 224 NSKGVYCLQY--DDDKI--ISGLRDNSIKIWDKQSLECLKVLTGHTGSV--LCLQYDERV 277
Query: 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
I+T S D T+ +W+ ++ + NTL E V + + G
Sbjct: 278 IVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNG 316
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 50/186 (26%), Positives = 84/186 (45%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR--EHWIVCGSDDKFIRVFDYNTMASVKEF 97
++ +W+ S T+ S++ R A V + +IV S D+ I+V+ +T V+
Sbjct: 326 SIAVWDMAS-ATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 384
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDL 157
H+ I L V++ S D I+LWD E C + EGH V F+ K +
Sbjct: 385 NGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKRI 441
Query: 158 NTFASASLDGTIQIWNM----DSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDFT 212
S + DG I++W++ D A TL + F + D+ +I+ S D T
Sbjct: 442 ---VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 498
Query: 213 VKVWDY 218
+ +WD+
Sbjct: 499 ILIWDF 504
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 228 (85.3 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 68/279 (24%), Positives = 120/279 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHS----QTTEKSVKVTDSPVRTAKFVAREHWIV 75
V S F +L S +SG +W+ QT A E +V
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVV 323
Query: 76 C---GSDDKFIRVFDYNTMASVKEFEAHEDY-IRSLAVHPTFPFVLTASDDKLIKLWDWE 131
G D ++++ +N S+ + H + + +A HP+ F+ TA D +LWD E
Sbjct: 324 AMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLE 383
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
+ E EGH+ V +++ D + + LD ++W++ + L+ H +
Sbjct: 384 QKTEVLHQ-EGHAKPVHCLSYH-SDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVF 441
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL-RIIITAS 250
+D+ + + ++ TGS D T K+WD + V + HTN ++ V + E ++T S
Sbjct: 442 GVDF--SPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCS 499
Query: 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVA 289
D T IW+ T++ TL +V S+ S +A
Sbjct: 500 YDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIA 538
Score = 217 (81.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 60/226 (26%), Positives = 100/226 (44%)
Query: 37 YSGTVCIWNYHSQTTEKSVKVTDS-PVRTAK--FVAREHWIVCGSDDKFIRVFDYNTMAS 93
+ G V +W ++++ E +T P R +K F ++ D R++D
Sbjct: 330 HDGAVKLWGFNNE--ESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTE 387
Query: 94 VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFN 153
V E H + L+ H ++T D ++WD + C EGH V F+
Sbjct: 388 VLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDL-RTGRCIMFLEGHLGAVFGVDFS 446
Query: 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
P + A+ S D T +IW++ +T+ AH I+ + Y +L+T S D T
Sbjct: 447 PNGFH-IATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGS-FLVTCSYDSTT 504
Query: 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+W +T ++ L+GH N V +V P + I T S D T +W+
Sbjct: 505 KIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWS 550
Score = 216 (81.1 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 69/254 (27%), Positives = 109/254 (42%)
Query: 56 KVTDS-PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFP 114
+V D+ PV +A F ++ S +++ + H Y+ +A+ P
Sbjct: 257 QVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVK 316
Query: 115 -----FVLTASD--DKLIKLWDWEKNWECTQTFEGHS-HYVMQSAFNPKDLNTFASASLD 166
V AS D +KLW + N E GH H V + AF+P A+A D
Sbjct: 317 ADEENVVAMASGGHDGAVKLWGFN-NEESIADITGHMPHRVSKVAFHPSG-RFLATACYD 374
Query: 167 GTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQI 226
+ ++W+++ + H K ++C+ Y SD L+TG D +VWD T C+
Sbjct: 375 SSWRLWDLEQKTEVLHQEGHAKPVHCLSYH--SDGSVLVTGGLDAFGRVWDLRTGRCIMF 432
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK--G 284
LEGH V V F P I T S+D T IW+ + T+ + + + Y++ G
Sbjct: 433 LEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECG 492
Query: 285 SNQVAFGCDNGTLI 298
S V D+ T I
Sbjct: 493 SFLVTCSYDSTTKI 506
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 47/198 (23%), Positives = 83/198 (41%)
Query: 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS 78
RV V FHP+ ++ + Y + +W+ +T + PV + + +V G
Sbjct: 355 RVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGG 414
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D F RV+D T + E H + + P + T S D K+WD + +
Sbjct: 415 LDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRR-QPVY 473
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
T H++ + + + + + S D T +IW+ + TL H+ + +D I
Sbjct: 474 TIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVD--IA 531
Query: 199 SDKVYLITGSDDFTVKVW 216
+ Y+ T S D T K+W
Sbjct: 532 PNSQYIATTSFDRTFKLW 549
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 29/104 (27%), Positives = 46/104 (44%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTF-PFVLTASDDKLIKLWDWEK 132
I GS D +++D V AH + I + F++T S D K+W K
Sbjct: 452 IATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWS-NK 510
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS 176
W+ +T +GH + V+ P A+ S D T ++W+ DS
Sbjct: 511 TWQPLKTLQGHDNKVISVDIAPNS-QYIATTSFDRTFKLWSPDS 553
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 225 (84.3 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 65/267 (24%), Positives = 116/267 (43%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GH+ V
Sbjct: 130 EGNVRVSRELAGHTGYL-SCCRFLDDNQIVTSSGDTTCALWDIETGQQTT-TFAGHTGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D F S + D + ++W++ + T HE IN I +F + TG
Sbjct: 188 MSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA--FATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + + H N +T+V F R+++ +D +W+A
Sbjct: 245 SDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 195 (73.7 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 61/221 (27%), Positives = 99/221 (44%)
Query: 46 YHSQTTEKSVKVTDSPVRTAKFVA--R---EHWIVCGSDDKFIRVFDYNTMASVKEFEAH 100
Y+ +T E +V+V+ +++ R ++ IV S D ++D T F H
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFAGH 183
Query: 101 EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTF 160
+ SL++ P ++ + D KLWD + C QTF GH + F P N F
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNG-NAF 241
Query: 161 ASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
A+ S D T +++++ D ++ D GI + F S ++ L+ G DDF VWD
Sbjct: 242 ATGSDDATCRLFDLRADQELMVYSHDNIICGITSVA-FSKSGRL-LLAGYDDFNCNVWDA 299
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 170 (64.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/204 (23%), Positives = 87/204 (42%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ T H + + + D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQTTTFAGHTGDVMSLS--LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
A+CF P T S+D T +++
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFD 254
Score = 147 (56.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D T +WD ET GHT
Sbjct: 128 TREGNVRVSRELAGHTGYLSCCRFL---DDNQIVTSSGDTTCALWDIETGQQTTTFAGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R+ ++ + D + +W+ + T + + +I + N A G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 226 (84.6 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 60/251 (23%), Positives = 114/251 (45%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83
FHP + ++ + + +WN + ++K V + + S DK +
Sbjct: 101 FHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTV 160
Query: 84 RVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFEG 142
V+D T VK + H ++ S P V T SDD +KLWD K QTF+
Sbjct: 161 AVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAVQTFQ- 218
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
+++ V+ FN + S +D I++W++ + +T+ H + + ++S+
Sbjct: 219 NTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGS 275
Query: 203 YLITGSDDFTVKVWDYET----KTCVQILEGHTNN----VTAVCFHPELRIIITASEDGT 254
YL++ + D TV++WD + CV+I +G+ +N + + P+ I S D
Sbjct: 276 YLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRF 335
Query: 255 ILIWNATTFRL 265
+ +W+ T+ R+
Sbjct: 336 VYVWDTTSRRI 346
Score = 210 (79.0 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 61/220 (27%), Positives = 107/220 (48%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC-GSDDKFIRVFDYNTMASVKEFE 98
TV +W+ + K +K S V + R +VC GSDD ++++D A+V+ F+
Sbjct: 159 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ 218
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
+ + ++ + T +++ D IK+WD +N + T T GH+ V + + +
Sbjct: 219 -NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHADSVTGLSLSSEGSY 276
Query: 159 TFASASLDGTIQIWNMDSSAAK------FTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
++A +D T++IW++ A K F + H N + + D + GS D
Sbjct: 277 LLSNA-MDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRF 335
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
V VWD ++ + L GH +V + FHPE II++AS D
Sbjct: 336 VYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSD 375
Score = 204 (76.9 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 59/204 (28%), Positives = 92/204 (45%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
A + HE + HP + +A D+LI LW+ + + T +GHS VM+
Sbjct: 84 APIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 143
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
+N D + SAS D T+ +W+ ++ L H +N Y + TGSDD
Sbjct: 144 YNT-DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDG 201
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
TVK+WD K VQ + +T V AV F+ II+ D I +W+ +L T+
Sbjct: 202 TVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 260
Query: 272 GLERVWSIGYK-KGSNQVAFGCDN 294
+ V + +GS ++ DN
Sbjct: 261 HADSVTGLSLSSEGSYLLSNAMDN 284
Score = 176 (67.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 47/206 (22%), Positives = 91/206 (44%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFD-YNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117
+ V KF + + D+ I +++ Y + + H + L + +
Sbjct: 93 EGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 152
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
+AS DK + +WD E E + +GH+ +V + + S DGT+++W++
Sbjct: 153 SASTDKTVAVWDSETG-ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 211
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
AA T + + + + TSD++ I+G D +KVWD + GH ++VT +
Sbjct: 212 AAVQTFQ-NTYQVLAVTFNDTSDQI--ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 268
Query: 238 CFHPELRIIITASEDGTILIWNATTF 263
E +++ + D T+ IW+ F
Sbjct: 269 SLSSEGSYLLSNAMDNTVRIWDVRPF 294
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 224 (83.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 64/267 (23%), Positives = 118/267 (44%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GHS V
Sbjct: 130 EGNVRVSRELPGHTGYL-SCCRFLDDSQIVTSSGDTTCALWDIETAQQTT-TFTGHSGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + +P D+ TF S + D + ++W++ + + H IN + +F + TG
Sbjct: 188 MSLSLSP-DMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFF--PNGYAFATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + +L H N +T+V F R+++ +D +W+
Sbjct: 245 SDDATCRLFDLRADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/223 (27%), Positives = 103/223 (46%)
Query: 46 YHSQTTEKSVKVT-DSPVRTA-----KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99
Y+ +T E +V+V+ + P T +F+ + IV S D ++D T F
Sbjct: 124 YNLKTREGNVRVSRELPGHTGYLSCCRFLD-DSQIVTSSGDTTCALWDIETAQQTTTFTG 182
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H + SL++ P ++ + D KLWD ++ C Q+F GH + +F P
Sbjct: 183 HSGDVMSLSLSPDMRTFVSGACDASSKLWDI-RDGMCRQSFTGHVSDINAVSFFPNGY-A 240
Query: 160 FASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYLITGSDDFTVKVW 216
FA+ S D T +++++ + + L +H+ GI + F S ++ L+ G DDF VW
Sbjct: 241 FATGSDDATCRLFDLRADQ-ELLLYSHDNIICGITSVA-FSKSGRL-LLAGYDDFNCNVW 297
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D +L GH N V+ + + + T S D + IWN
Sbjct: 298 DTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 152 (58.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 45/204 (22%), Positives = 88/204 (43%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T + ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH+ Y+ F D + ++S D T +W+++
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRF--LDDSQIVTSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
++ T H + + ++ D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TAQQTTTFTGHSGDVMSLS--LSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P T S+D T +++
Sbjct: 231 AVSFFPNGYAFATGSDDATCRLFD 254
Score = 138 (53.6 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 41/185 (22%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKMHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D T +WD ET GH+
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFL---DDSQIVTSSGDTTCALWDIETAQQTTTFTGHS 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P++R ++ + D + +W+ + + + + + ++ + A G
Sbjct: 185 GDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 223 (83.6 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 61/215 (28%), Positives = 96/215 (44%)
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN--WECTQTFEGHSHYVMQSAFNPK 155
EA D + +LA HP + T ++DK I++W + N W Q+ EGH V + A++P
Sbjct: 21 EAPYDKVWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPC 80
Query: 156 DLNTFASASLDGTIQIWNMDSSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDF 211
A AS D + IW +FT L+ H + + + T L T S D
Sbjct: 81 G-RFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTG--TLLATCSRDK 137
Query: 212 TVKVWDYETKT---CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT--FRLQ 266
++ +W E C+ I GH ++ V +HP ++ ++S D TI W +
Sbjct: 138 SIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECI 197
Query: 267 NTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLIVK 300
NTL+ +W + + K G V+ G D L K
Sbjct: 198 NTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWK 232
Score = 179 (68.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 57/237 (24%), Positives = 111/237 (46%)
Query: 78 SDDKFIRVFDYNTMAS---VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN- 133
++DK+I+++ +T V+ E HE +R +A P F+ AS D +W+ K+
Sbjct: 43 ANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDE 102
Query: 134 WECTQ--TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM--DSSAAKFTLDA-HEK 188
E T + EGH++ V A++ A+ S D +I IW M D+ ++++ H +
Sbjct: 103 LEFTHVSSLEGHTYEVKSVAWDSTG-TLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQ 161
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVW-DYETK-TCVQILEGHTNNVTAVCFHPELRII 246
I C+ + + L + S D T+K W D + C+ L GH +++ + F+ + +
Sbjct: 162 DIKCVLWHPNEE--LLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDKL 219
Query: 247 ITASEDGTILIW-----NATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298
++ ED +L W N + + ++SI + +N + G + ++I
Sbjct: 220 VSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSII 276
Score = 157 (60.3 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 50/198 (25%), Positives = 88/198 (44%)
Query: 78 SDDKFIRVF---DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW-DWEKN 133
S DK I ++ D N + H I+ + HP + ++S D IK W D + +
Sbjct: 134 SRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGD 193
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT-----LDAHEK 188
WEC T GH + AFN KD + S D + W D K+ + + +
Sbjct: 194 WECINTLTGHESSIWDLAFN-KDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSR 252
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYET-------KTCVQILEGHTNNVTAVCFHP 241
I ID+ ++ + +TGS D ++ ++ E+ K ++ H ++V ++P
Sbjct: 253 PIYSIDWSSLTNTI--VTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNP 310
Query: 242 ELR-IIITASEDGTILIW 258
+ + I+ + +DG I IW
Sbjct: 311 KFKNILASCGDDGFIKIW 328
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 227 (85.0 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 63/237 (26%), Positives = 107/237 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ V + P +L +G +WN + E + D VR A++ W++ G
Sbjct: 84 INVVRWTPDGRRLLTGSSTGEFTLWNGLTFNFELINQSHDYAVRCAEWSTDGRWLISGDG 143
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
++ F+ N + +VK +AHE +R +A P +TASDD +K+W++ + E +
Sbjct: 144 GGMVKYFEPN-LNNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELK- 201
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V ++P AS S D ++ W+ + TL H+ I +
Sbjct: 202 LTGHGWDVKTVDWHPSK-GLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNF 260
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL-RIIITASEDGTI 255
YL T S D T +V+D V++L GH +V V +HP ++ T DG++
Sbjct: 261 GSNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSV 317
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/177 (25%), Positives = 78/177 (44%)
Query: 116 VLTASDDKLIKLWDWEK-NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
+LT S LW+ N+E + H Y ++ A D S G ++ +
Sbjct: 96 LLTGSSTGEFTLWNGLTFNFELIN--QSHD-YAVRCAEWSTDGRWLISGDGGGMVKYFEP 152
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNV 234
+ + K + AHE + + F +D + +T SDD ++KVW++ T L GH +V
Sbjct: 153 NLNNVKI-VQAHEMEVRDVA-FSPNDSKF-VTASDDGSLKVWNFHMSTEELKLTGHGWDV 209
Query: 235 TAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK--GSNQVA 289
V +HP ++ + S+D + W+ T TL + ++K GSN +A
Sbjct: 210 KTVDWHPSKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLA 266
Score = 128 (50.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 36/174 (20%), Positives = 71/174 (40%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V+ V F P + + G++ +WN+H T E + V+T + + + GS
Sbjct: 167 VRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSK 226
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFP--FVLTASDDKLIKLWDWEKNWECT 137
D ++ +D T + H++ I + F ++ T S D +++D + +
Sbjct: 227 DNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDL-RAMKDV 285
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
+ GH V ++P N + DG++ +++D HEK N
Sbjct: 286 RVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHYSLDEPPLLSQQKYHEKHPN 339
Score = 47 (21.6 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 11/48 (22%), Positives = 20/48 (41%)
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
T+ Y +I H + ++ +HP ++ T S D T W+
Sbjct: 341 TLSASSYLLYPTAEIPFAHDLGIWSMQYHPLGHLLCTGSNDKTTRFWS 388
Score = 46 (21.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AH+ GI + Y L TGS+D T + W
Sbjct: 358 AHDLGIWSMQYHPLGH--LLCTGSNDKTTRFW 387
>ZFIN|ZDB-GENE-030131-3831 [details] [associations]
symbol:utp15 "utp15, U3 small nucleolar
ribonucleoprotein, homolog" species:7955 "Danio rerio" [GO:0005730
"nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0045766 "positive regulation of angiogenesis"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-3831
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0045766 InterPro:IPR018391
SMART:SM00564 GO:GO:0006364 CTD:84135 GeneTree:ENSGT00390000004228
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 EMBL:AY398371 EMBL:BC045308 IPI:IPI00491201
RefSeq:NP_955998.1 UniGene:Dr.78694 ProteinModelPortal:Q7ZW33
STRING:Q7ZW33 Ensembl:ENSDART00000127397 Ensembl:ENSDART00000148774
GeneID:325106 KEGG:dre:325106 InParanoid:Q7ZW33 NextBio:20809122
Bgee:Q7ZW33 Uniprot:Q7ZW33
Length = 517
Score = 227 (85.0 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 74/291 (25%), Positives = 131/291 (45%)
Query: 14 IQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHW 73
I++ V +DF P P A S V I+ HSQ ++ F
Sbjct: 35 IKEFGAVSKIDFSPLPPHNYAVTASTRVHIYGLHSQEPIRNFTRFHDTAYGGSFRGDGKL 94
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+V GS++ IR+FD S+++F+ H + + + VL+ SDD ++WD
Sbjct: 95 LVAGSEEGLIRLFDIGGRVSLRQFKGHSKAVHATSFLSDGFRVLSGSDDLTCRVWDVASA 154
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLN--TFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
E + E H+ Y+ A P LN F + S D T++++++ S + T+ H + +
Sbjct: 155 VELSSITE-HTDYIR--AIAPSKLNPDVFVTGSYDHTVKMFDVRSGNSVMTMQ-HGQPVE 210
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQI--LEGHTNNVTAVCFHPELRIIITA 249
C+ + S+ + + TG VKVWD K Q+ L+ H VT C +++ TA
Sbjct: 211 CVLLY-PSEALLVSTGGR--YVKVWDL-LKGGQQLVSLKNHHKTVTCACLSSSNKLL-TA 265
Query: 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300
S D + ++N++ +++ + + S+ VA G NG L ++
Sbjct: 266 SLDRHVKVYNSS-YKVVHNFDCA-SSILSLAVAPDDEAVAVGMTNGVLSIR 314
Score = 124 (48.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 47/213 (22%), Positives = 90/213 (42%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
+ F + D F ++A G + +++ + + + K V F++
Sbjct: 74 RNFTRFHDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRVSLRQFKGHSKAVHATSFLSD 133
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFV-LTASDDKLIKLWD 129
++ GSDD RV+D + + H DYIR++A P V +T S D +K++D
Sbjct: 134 GFRVLSGSDDLTCRVWDVASAVELSSITEHTDYIRAIAPSKLNPDVFVTGSYDHTVKMFD 193
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF-TLDAHEK 188
++ T + H V P + ++ +++W++ + +L H K
Sbjct: 194 -VRSGNSVMTMQ-HGQPVECVLLYPSEALLVSTGGR--YVKVWDLLKGGQQLVSLKNHHK 249
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETK 221
+ C +S+K L+T S D VKV++ K
Sbjct: 250 TVTCA-CLSSSNK--LLTASLDRHVKVYNSSYK 279
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 227 (85.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 50/199 (25%), Positives = 101/199 (50%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV + +F++ ++ S+D IR +D + + ++ H + L + P + +AS
Sbjct: 344 PVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASAS 403
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D+ +LW +++ + + + GH V F+P N A+ S D T+++W+ +
Sbjct: 404 HDRTARLWSFDRTYPL-RIYAGHLLDVDCVKFHPNS-NYLATGSTDKTVRLWSTQQGNSV 461
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H + + F + K YL + +D +K+WD + T + L GHT+N+T++ F
Sbjct: 462 RLFTGHRGPVLALA-FSPNGK-YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 241 PELRIIITASEDGTILIWN 259
P+ +I +AS D ++ +W+
Sbjct: 520 PDSSLIASASMDNSVRVWD 538
Score = 220 (82.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 53/190 (27%), Positives = 95/190 (50%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
+L+ S+D I+ WD +++ T ++GH++ V +P L FASAS D T ++W+ D
Sbjct: 357 LLSCSEDMSIRYWDL-RSFTNTVLYQGHAYPVWDLDISPCSLY-FASASHDRTARLWSFD 414
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ H ++C+ + S+ YL TGS D TV++W + V++ GH V
Sbjct: 415 RTYPLRIYAGHLLDVDCVKFHPNSN--YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVL 472
Query: 236 AVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC-DN 294
A+ F P + + +A ED + +W+ + L L + + S+ + S+ +A DN
Sbjct: 473 ALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDN 532
Query: 295 GTLIVKIGNS 304
+ I N+
Sbjct: 533 SVRVWDIRNT 542
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 38/165 (23%), Positives = 74/165 (44%)
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+ S D+ R++ ++ ++ + H + + HP ++ T S DK ++LW ++
Sbjct: 398 YFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 457
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ F GH V+ AF+P ASA D +++W++ S L H I
Sbjct: 458 G-NSVRLFTGHRGPVLALAFSPNG-KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
+ + + D + + S D +V+VWD C +G ++ + V
Sbjct: 516 LTF--SPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSELVGV 558
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 30/125 (24%), Positives = 52/125 (41%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++ TV +W+ + + PV F ++ +
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGE 488
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ ++++D + KE H D I SL P + +AS D +++WD +N C
Sbjct: 489 DQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI-RNTYCNAP 547
Query: 140 FEGHS 144
+G S
Sbjct: 548 ADGSS 552
Score = 38 (18.4 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 101 EDYIRSLAVHPTFPFVLTASDDKLIKLW 128
E + + + P + D+ +KLW
Sbjct: 268 EQLLNTAEISPNSKLLAAGFDNSCVKLW 295
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 221 (82.9 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 61/223 (27%), Positives = 107/223 (47%)
Query: 89 NTMASVKEFEAHEDY-IRSLAVHPTFPFVLTASDDKLIKLWDWE-KNWEC-TQTFEGHSH 145
+T+A +++F AH D +A +P + + D+ I++W E +WEC T +GH
Sbjct: 3 DTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQR 62
Query: 146 YVMQSAFNPKDLNTFASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVY 203
V + A++P N ASAS D T IW D L+ HE + C+ + + ++
Sbjct: 63 AVRKVAWSPCG-NYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQ-- 119
Query: 204 LITGSDDFTVKVWDYETKT---CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNA 260
L T S D +V +W+ + + CV ++ HT +V V +HP ++ + S D + ++
Sbjct: 120 LATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKE 179
Query: 261 TT--FRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
+ + TL VW + + ++A D+ T VKI
Sbjct: 180 EDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRT--VKI 220
Score = 166 (63.5 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 66/246 (26%), Positives = 112/246 (45%)
Query: 76 CGSDDKFIRVF----DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
CG D + IR++ D +V + + H+ +R +A P ++ +AS D +W +
Sbjct: 34 CGGD-RAIRIWGREGDSWECKTVLQ-DGHQRAVRKVAWSPCGNYLASASFDATTCIWK-K 90
Query: 132 KN--WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS---AAKFTLDAH 186
KN +EC EGH + V A+ P N A+ S D ++ IW +D +++H
Sbjct: 91 KNDDFECLTVLEGHENEVKCVAWAPSG-NQLATCSRDKSVWIWEVDEEDEYECVSVVNSH 149
Query: 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT--CVQILEGHTNNVTAVCFHPELR 244
+ + + + T + L + S D V V+ E C LEGHT+ V + F P +
Sbjct: 150 TQDVKHVVWHPTQE--LLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQ 207
Query: 245 IIITASEDGTILIWNA--------TTFRLQNTLSSGLER-VWSIGYKKGSNQVAFGC-DN 294
+ + S+D T+ IW T ++ TLS R V+ I + + +A C D+
Sbjct: 208 RLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDD 267
Query: 295 GTLIVK 300
G + K
Sbjct: 268 GVRVFK 273
Score = 134 (52.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTE--KSVKVTDSPVRTAKFVAREHWIVCG 77
V+ V + P ++ ++ + T CIW + E ++ ++ V+ + + +
Sbjct: 64 VRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATC 123
Query: 78 SDDKFIRVFDYNT---MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN- 133
S DK + +++ + V +H ++ + HPT + + S D + ++ E +
Sbjct: 124 SRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDD 183
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW 172
WEC T EGH+ V F+P AS S D T++IW
Sbjct: 184 WECRATLEGHTSTVWGLTFDPSG-QRLASCSDDRTVKIW 221
Score = 112 (44.5 bits), Expect = 0.00085, P = 0.00085
Identities = 35/141 (24%), Positives = 64/141 (45%)
Query: 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD-------WEKNWECTQTFEG-HSHYVMQ 149
E H + L P+ + + SDD+ +K+W + W+C T G H V
Sbjct: 191 EGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYD 250
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAK----FTLDAH-----EKGINCIDYFITSD 200
A+ P A+A D ++++ D +A F+L AH + +NCI + +
Sbjct: 251 IAWCPLT-GALATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWH-PKE 308
Query: 201 KVYLITGSDDFTVKVWDYETK 221
L++ SD+ + VW+Y+++
Sbjct: 309 AGLLVSCSDNGEIAVWNYQSE 329
Score = 95 (38.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 43/189 (22%), Positives = 76/189 (40%)
Query: 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA---REHWI 74
+ VK V + P+ + +V IW + + V V +S + K V + +
Sbjct: 106 NEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELL 165
Query: 75 VCGSDDKFIRVF-----DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
S D + V+ D+ A++ E H + L P+ + + SDD+ +K+W
Sbjct: 166 ASCSYDNNVCVYKEEDDDWECRATL---EGHTSTVWGLTFDPSGQRLASCSDDRTVKIWK 222
Query: 130 -------WEKNWECTQTFEG-HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK- 180
+ W+C T G H V A+ P A+A D ++++ D +A
Sbjct: 223 ECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLT-GALATACGDDGVRVFKEDETADPD 281
Query: 181 ---FTLDAH 186
F+L AH
Sbjct: 282 QPVFSLSAH 290
Score = 70 (29.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 228 EGHTNNVTAVCFHP-ELRIIITASEDGTILIWN 259
+ H+ +V + +HP E ++++ S++G I +WN
Sbjct: 293 KAHSQDVNCIAWHPKEAGLLVSCSDNGEIAVWN 325
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 220 (82.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 68/251 (27%), Positives = 108/251 (43%)
Query: 58 TDSPVRTAKFVAREHWIVCGSD--DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115
T + A A I+ S D F+RVFD +T A++ EA + + P
Sbjct: 57 TGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTI 116
Query: 116 VLTASDDKL-IKLWDWEKNWECTQTFE-------------GHSHYVMQSAFNPKDLNTFA 161
+ A +KLWD +W T +V+ A++P A
Sbjct: 117 LAVAGGSSASVKLWD-TASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNG-KRLA 174
Query: 162 SASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK 221
S+DGTI ++++D S L+ H + + F D L +GSDD V + D E K
Sbjct: 175 CGSMDGTICVFDVDRSKLLHQLEGHNMPVRSL-VFSPVDPRVLFSGSDDGHVNMHDAEGK 233
Query: 222 TCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGY 281
T + + GHT+ V +V P+ I T S D T+ +W+ T+S+ ++VWS+ +
Sbjct: 234 TLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAF 293
Query: 282 KK-GSNQVAFG 291
+ G V G
Sbjct: 294 RPPGGTGVRAG 304
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 55/199 (27%), Positives = 92/199 (46%)
Query: 38 SGTVCIWNYHSQTTEKSVKVT--DSPV---RTA--KFVAREHW------IVCGSDDKFIR 84
S +V +W+ S ++ + D+P +T+ KFV W + CGS D I
Sbjct: 124 SASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTIC 183
Query: 85 VFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGH 143
VFD + + + E H +RSL P P VL + SDD + + D E + GH
Sbjct: 184 VFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGK-TLLGSMSGH 242
Query: 144 SHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI---TSD 200
+ +V+ +P D A+ S D T+++W++ AA T+ H + + + T
Sbjct: 243 TSWVLSVDASP-DGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGV 301
Query: 201 KV-YLITGSDDFTVKVWDY 218
+ L + SDD +V ++DY
Sbjct: 302 RAGRLASVSDDKSVSLYDY 320
Score = 132 (51.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 52/236 (22%), Positives = 101/236 (42%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
++ GS D+ ++++ + + V+ H + +LA HP+ ++S D ++++D + N
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTN 92
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-----DAHEK 188
E V F PK + ++++W+ S TL DA +
Sbjct: 93 -ATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKP 151
Query: 189 GINCIDY-FITS-----DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP- 241
F+ S + L GS D T+ V+D + + LEGH V ++ F P
Sbjct: 152 SDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPV 211
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
+ R++ + S+DG + + +A L ++S V S+ +A G + T+
Sbjct: 212 DPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTV 267
Score = 124 (48.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 32/136 (23%), Positives = 57/136 (41%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV-CGS 78
V SV + P + GT+C+++ ++ + PVR+ F + ++ GS
Sbjct: 161 VLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS 220
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
DD + + D + H ++ S+ P + T S D+ ++LWD + Q
Sbjct: 221 DDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMR-AAIQ 279
Query: 139 TFEGHSHYVMQSAFNP 154
T H+ V AF P
Sbjct: 280 TMSNHNDQVWSVAFRP 295
Score = 112 (44.5 bits), Expect = 0.00081, P = 0.00081
Identities = 36/152 (23%), Positives = 68/152 (44%)
Query: 162 SASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK 221
+ SLD T+++W D T H G+ + + + + S D V+V+D +T
Sbjct: 35 TGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSG--IIAASSSIDSFVRVFDVDTN 92
Query: 222 TCVQILEGHTNNVTAVCFHPELRIIITAS-EDGTILIWNATTFRLQNTLS---------- 270
+ +LE + V + F P+ I+ A ++ +W+ ++RL +TLS
Sbjct: 93 ATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPS 152
Query: 271 ---SGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
S + V S+ + ++A G +GT+ V
Sbjct: 153 DKTSSKKFVLSVAWSPNGKRLACGSMDGTICV 184
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 49/179 (27%), Positives = 92/179 (51%)
Query: 91 MASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQ 149
+A+V+E AH + SL + +L T DD + LW K C + GH+ V
Sbjct: 14 VAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVES 72
Query: 150 SAFN-PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS 208
N P++L + S G+I++W+++++ TL H+ I +D+ + ++ +GS
Sbjct: 73 VRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASGS 128
Query: 209 DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
D +K+WD K CV GH+ V + F P+ + + +A++D T+ +W+ T ++ +
Sbjct: 129 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 187
Score = 184 (69.8 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVC---IWNYHSQTTEKSVKVTDSPVRTAKF 67
+E + + V S+ +LA+ G C +W+ + S+ SPV + +
Sbjct: 18 EEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 75
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
E IV GS IRV+D ++ H+ I SL HP FV + S D IKL
Sbjct: 76 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 135
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
WD + C + GHS V F+P D ASA+ D T+++W++ + H
Sbjct: 136 WDIRRKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 193
Query: 188 KGINCIDY 195
+N +++
Sbjct: 194 GPVNVVEF 201
Score = 183 (69.5 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 42/168 (25%), Positives = 73/168 (43%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+ G DD + ++ N + H + S+ ++ ++ S I++WD E
Sbjct: 40 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 99
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+ +T GH + F+P AS S D I++W++ F H + + C+
Sbjct: 100 -KILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 157
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+ + D +L + +DD TVK+WD + GHT V V FHP
Sbjct: 158 RF--SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 203
Score = 127 (49.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
AA + AH ++ + S ++ L TG DD V +W C+ L GHT+ V +V
Sbjct: 15 AAVEEIVAHASNVSSLVLGKASGRL-LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 73
Query: 238 CFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
+ +I+ S+ G+I +W+ ++ TL + S+ + VA G + +
Sbjct: 74 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 133
Query: 298 IVKIGNSSGC 307
+ GC
Sbjct: 134 KLWDIRRKGC 143
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 226 (84.6 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 68/270 (25%), Positives = 121/270 (44%)
Query: 9 IEKEFIQKSDR--VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAK 66
++ E + KS ++SV F P ++ + +W+ ++T + + + +
Sbjct: 306 LQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLD 365
Query: 67 FVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIK 126
F +I GS DK +R++D V ED + ++A+ P +V S DK ++
Sbjct: 366 FAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSI-EDGVTTVAMSPDGLYVAAGSLDKTVR 424
Query: 127 LWDWEKNW--ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD------SSA 178
+WD + E + +GH V AF P S SLD TI++W ++ +SA
Sbjct: 425 VWDTTTGYLVERLENPDGHKDSVYSVAFAPNG-KELVSGSLDKTIKLWELNLPRQQYNSA 483
Query: 179 AKF-----TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNN 233
K T + H+ + + +T D ++++GS D V+ WD T +L+GH N+
Sbjct: 484 GKGGKCHRTFEGHKDFV--LSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNS 541
Query: 234 VTAVCFHPELRIIITASEDGTILIWNATTF 263
V +V P + T S D IW + +
Sbjct: 542 VISVAPSPTGNLFATGSGDMRARIWRYSAY 571
Score = 198 (74.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 71/256 (27%), Positives = 114/256 (44%)
Query: 52 EKSV-KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVH 110
++SV K D +R+ F ++ G++DK IRV+D T F HE I SL
Sbjct: 308 DESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFA 367
Query: 111 PTFPFVLTASDDKLIKLWDW-EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169
++ + S DK ++LWD E T + E V A +P L A+ SLD T+
Sbjct: 368 GNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG---VTTVAMSPDGLYV-AAGSLDKTV 423
Query: 170 QIWNMDSSAAKFTL---DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD-------YE 219
++W+ + L D H+ + + F + K L++GS D T+K+W+ Y
Sbjct: 424 RVWDTTTGYLVERLENPDGHKDSVYSVA-FAPNGKE-LVSGSLDKTIKLWELNLPRQQYN 481
Query: 220 TK----TCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLER 275
+ C + EGH + V +VC P+ +++ S+D + W+ T Q L
Sbjct: 482 SAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNS 541
Query: 276 VWSIGYKKGSNQVAFG 291
V S+ N A G
Sbjct: 542 VISVAPSPTGNLFATG 557
Score = 189 (71.6 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 57/216 (26%), Positives = 94/216 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ S+DF ++ + TV +W+ ++ + D V T ++ GS
Sbjct: 361 IYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDGLYVAAGSL 419
Query: 80 DKFIRVFDYNTMASVKEFE---AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE----- 131
DK +RV+D T V+ E H+D + S+A P +++ S DK IKLW+
Sbjct: 420 DKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQ 479
Query: 132 -----KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAH 186
K +C +TFEGH +V+ P D + S S D +Q W+ + A+ L H
Sbjct: 480 YNSAGKGGKCHRTFEGHKDFVLSVCLTP-DGHWVMSGSKDRGVQFWDPITGNAQMMLQGH 538
Query: 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT 222
+ + + T + TGS D ++W Y T
Sbjct: 539 KNSVISVAPSPTGN--LFATGSGDMRARIWRYSAYT 572
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 221 (82.9 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 63/267 (23%), Positives = 115/267 (43%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + +W+ H+ ++ + S V T + ++ CG D +++ T
Sbjct: 70 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T +F GH+ V
Sbjct: 130 EGNVRVSRELPGHGGYL-SCCRFLDDNQIVTSSGDMSCGLWDIETGLQVT-SFLGHTGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P+ TF S + D + ++W++ K T HE IN + +F TG
Sbjct: 188 MALSLAPQ-CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQA--FATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + + H N +T+V F R+++ +D +W+
Sbjct: 245 SDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAE 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G + VA G
Sbjct: 304 RSGILAGHDNRVSCLGVTENGMAVATG 330
Score = 192 (72.6 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 67/252 (26%), Positives = 111/252 (44%)
Query: 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVT-DSP-----VRTAKFVA 69
+S V + + P+ +V I+N +T E +V+V+ + P + +F+
Sbjct: 96 RSSWVMTCAYAPSGSYVACGGLDNMCSIYNL--KTREGNVRVSRELPGHGGYLSCCRFLD 153
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
++ IV S D ++D T V F H + +L++ P ++ + D KLWD
Sbjct: 154 -DNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWD 212
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM--DSSAAKFTLDAHE 187
+ C QTF GH + F P FA+ S D T +++++ D A ++ D
Sbjct: 213 IREG-VCKQTFPGHESDINAVTFFPNG-QAFATGSDDATCRLFDIRADQELAMYSHDNII 270
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
GI + F S ++ L+ G DDF VWD IL GH N V+ + +
Sbjct: 271 CGITSVA-FSKSGRL-LLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVA 328
Query: 248 TASEDGTILIWN 259
T S D + +WN
Sbjct: 329 TGSWDSFLRVWN 340
Score = 150 (57.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 46/204 (22%), Positives = 87/204 (42%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + V+D +T V ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH Y+ F D N ++S D + +W+++
Sbjct: 115 GGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRF--LDDNQIVTSSGDMSCGLWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ + H + + K + ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGLQVTSFLGHTGDVMALS-LAPQCKTF-VSGACDASAKLWDIREGVCKQTFPGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
AV F P + T S+D T +++
Sbjct: 231 AVTFFPNGQAFATGSDDATCRLFD 254
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/185 (22%), Positives = 73/185 (39%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P + A LD I+N+
Sbjct: 71 VSASQDGKLI-VWD-SHTTNKVHAIPLRSSWVMTCAYAPSG-SYVACGGLDNMCSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D + +WD ET V GHT
Sbjct: 128 TREGNVRVSRELPGHGGYLSCCRFL---DDNQIVTSSGDMSCGLWDIETGLQVTSFLGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V A+ P+ + ++ + D + +W+ + T + ++ + A G
Sbjct: 185 GDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 223 (83.6 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 64/291 (21%), Positives = 128/291 (43%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+E+ F S + + F P + S TV +WN + +PV +
Sbjct: 10 LERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWS 69
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ + + D+ +++++ EF AH +RS+ T +LTASDDK K+W
Sbjct: 70 PKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIW 129
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
+ + +F +++V + F+P A+AS D +++I+++DS T
Sbjct: 130 RVARR-QFVSSFAQQNNWVRSAKFSPNG-KLVATASDDKSVRIYDVDSGECVRTFTEERA 187
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
+ + + + + G + +K++D +Q+ H+ V V FHP +++
Sbjct: 188 APRQLAWHPWGNMLAVALGCN--RIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLS 245
Query: 249 ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
S+D TI I + R TL+ + V ++ + + ++ A G + L+V
Sbjct: 246 GSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLV 296
Score = 222 (83.2 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 65/248 (26%), Positives = 108/248 (43%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
F S V V + P V ++ + TV IW + VR+ F + H
Sbjct: 56 FASHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGH 115
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
++ SDDK +++ V F +++RS P V TASDDK ++++D +
Sbjct: 116 LMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDS 175
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
EC +TF Q A++P N A A I+I+++ S H +N
Sbjct: 176 G-ECVRTFTEERAAPRQLAWHPWG-NMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVND 233
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ + + +L++GSDD T+++ D + L GHT+ V AV F + T D
Sbjct: 234 VAFHPSGH--FLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSD 291
Query: 253 GTILIWNA 260
+L+W +
Sbjct: 292 RQLLVWQS 299
Score = 194 (73.4 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 60/214 (28%), Positives = 93/214 (43%)
Query: 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFV 68
+ EF+ S V+SVDF T +L + + IW + S ++ VR+AKF
Sbjct: 94 VSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFS 153
Query: 69 AREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128
+ SDDK +R++D ++ V+ F R LA HP + A IK++
Sbjct: 154 PNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIF 213
Query: 129 DWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK 188
D + + Q + HS V AF+P + S S D TI+I ++ +TL H
Sbjct: 214 DVSGS-QLLQLYVVHSAPVNDVAFHPSG-HFLLSGSDDRTIRILDLLEGRPIYTLTGHTD 271
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKT 222
+N + + DK TG D + VW T
Sbjct: 272 AVNAVAFSRDGDK--FATGGSDRQLLVWQSNLHT 303
Score = 144 (55.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 42/169 (24%), Positives = 77/169 (45%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GHS + Q F P D A++S D T+ +WN++ +A +H +N + + S
Sbjct: 14 FTGHSGGITQLRFGP-DGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAW---S 69
Query: 200 DKVYLITGSD-DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
K L+ + D TVK+W+ + + H+ V +V F +++TAS+D + IW
Sbjct: 70 PKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIW 129
Query: 259 NATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
+ ++ + V S + VA D+ ++ + +S C
Sbjct: 130 RVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGEC 178
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 47/226 (20%), Positives = 99/226 (43%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKF 67
Q F Q+++ V+S F P V + +V I++ S ++ + R +
Sbjct: 135 QFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAW 194
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
+ + I++FD + ++ + H + +A HP+ F+L+ SDD+ I++
Sbjct: 195 HPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRI 254
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW--NMDS-SAAKFTLD 184
D + T GH+ V AF+ +D + FA+ D + +W N+ + A++F
Sbjct: 255 LDLLEG-RPIYTLTGHTDAVNAVAFS-RDGDKFATGGSDRQLLVWQSNLHTYDASQFEAK 312
Query: 185 AHEKGINCIDYFITSDKVY--LITGSDDFTVKVWDYETKTCVQILE 228
+ +C ++S + + S+D ++++ D Q+ E
Sbjct: 313 SALASSSCESSGVSSKQSEGSSTSKSNDLSIRI-DPRQSLAYQLSE 357
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 223 (83.6 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 50/169 (29%), Positives = 85/169 (50%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
+V S+D IR++D+ T + + H D ++ +A + + S D IKLWD++++
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+EC +T GH H V AF P + SAS D TI++W + + T H + + +
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAG-DYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMV 241
Query: 194 DYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
I ++ T S+D T++VW +K C L H + V + + PE
Sbjct: 242 RVHIEGS-IFA-TCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPE 288
Score = 222 (83.2 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 50/160 (31%), Positives = 82/160 (51%)
Query: 100 HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159
H I + HP F +++AS+D I++WD+E E ++ +GH+ V AF+ +
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETG-EYERSLKGHTDSVQDVAFDAQG-KL 164
Query: 160 FASASLDGTIQIWNMDSSAAKF-TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
AS S D +I++W+ S T+ H+ ++ + + D Y+++ S D T+K+W+
Sbjct: 165 LASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKMWEV 222
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
T CV+ GH V V H E I T S D TI +W
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 222 (83.2 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 62/224 (27%), Positives = 106/224 (47%)
Query: 53 KSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPT 112
K++ D V + FV +++ S D+ I++++ T VK + H +++R + VH
Sbjct: 187 KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIE 246
Query: 113 FPFVLTASDDKLIKLW------------DWEKNWECTQTF-EGHSHYVMQSAF--NPKDL 157
T S+D+ I++W D E EC E + + ++A N K
Sbjct: 247 GSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGH 306
Query: 158 NT---FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVK 214
+ AS S D TI+IW++ TL H+ + + F K YL++ SDD T++
Sbjct: 307 HQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLA-FHPGGK-YLVSASDDKTIR 364
Query: 215 VWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
VWD K C++ L H + T++ FH +I+ S D T+ +W
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 210 (79.0 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 52/176 (29%), Positives = 92/176 (52%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGS 78
+ V FHP ++++ T+ IW++ + E+S+K TDS V+ F A+ + S
Sbjct: 111 ITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDS-VQDVAFDAQGKLLASCS 169
Query: 79 DDKFIRVFDYN-TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT 137
D I+++D+ + +K H+ + S+A P +VL+AS D+ IK+W+ + C
Sbjct: 170 ADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGY-CV 228
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCI 193
+T+ GH +V + + + FA+ S D TI++W +S K L HE + CI
Sbjct: 229 KTYTGHREWVRMVRVHIEG-SIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECI 283
Score = 177 (67.4 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 49/169 (28%), Positives = 84/169 (49%)
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH + + F+P SAS D TI+IW+ ++ + +L H + + F K
Sbjct: 106 GHRASITRVIFHPI-FALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVA-FDAQGK 163
Query: 202 VYLITGSDDFTVKVWDYETK-TCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNA 260
+ L + S D ++K+WD++ C++ + GH +NV++V F P +++AS D TI +W
Sbjct: 164 L-LASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 261 TTFRLQNTLSSGLERVWSIG-YKKGSNQVAFGCDNG-TLIVKIGNSSGC 307
T T + E V + + +GS + C N T+ V + NS C
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGS--IFATCSNDQTIRVWLTNSKDC 269
Score = 176 (67.0 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 54/223 (24%), Positives = 98/223 (43%)
Query: 94 VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW---------ECTQTFEGHS 144
+K H+ + S+A P +VL+AS D+ IK+W+ + E + H
Sbjct: 186 IKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 145 H-YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV- 202
+ + N + + + + S D +++ + + + A E + I+ +D
Sbjct: 246 EGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAW-APEAAASAINEAAGADNKK 304
Query: 203 ------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+L +GS D T+++WD C+ L GH N V + FHP + +++AS+D TI
Sbjct: 305 GHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+W+ R TL + SI + K V G + T+ V
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 407
Score = 174 (66.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 63/219 (28%), Positives = 96/219 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKF-VAREHWIVCGS 78
V SV F P +VL++ T+ +W + K+ VR + + + C S
Sbjct: 196 VSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATC-S 254
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTF--------------------PFVLT 118
+D+ IRV+ N+ E HE + +A P PF+ +
Sbjct: 255 NDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLAS 314
Query: 119 ASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
S DK I++WD C T GH ++V AF+P SAS D TI++W++ +
Sbjct: 315 GSRDKTIRIWDVSVGL-CLLTLSGHDNWVRGLAFHPGG-KYLVSASDDKTIRVWDLRNKR 372
Query: 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL AH+ ID+ Y+I+GS D TVKVW+
Sbjct: 373 CMKTLYAHQHFCTSIDFHKAHP--YVISGSVDQTVKVWE 409
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 27/110 (24%), Positives = 56/110 (50%)
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239
KF+L H I + + +++ S+D T+++WD+ET + L+GHT++V V F
Sbjct: 101 KFSLTGHRASITRVIFHPIF--ALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAF 158
Query: 240 HPELRIIITASEDGTILIWN-ATTFRLQNTLSSGLERVWSIGYKKGSNQV 288
+ +++ + S D +I +W+ ++ T+ V S+ + + V
Sbjct: 159 DAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV 208
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 220 (82.5 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 65/267 (24%), Positives = 115/267 (43%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GH+ V
Sbjct: 130 EGNVRVSRELAGHTGYL-SCCRFLDDNQIVTSSGDTTCALWDIETGQQTT-TFTGHTGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D F S + D + ++W++ + T HE IN I +F + TG
Sbjct: 188 MSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA--FATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + H N +T+V F R+++ +D +W+A
Sbjct: 245 SDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 198 (74.8 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVTDSPVRTAKFVA--R---EHWIVCGSDDKFIRVFDYNTMASVKEFEAH 100
Y+ +T E +V+V+ +++ R ++ IV S D ++D T F H
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 101 EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTF 160
+ SL++ P ++ + D KLWD + C QTF GH + F P N F
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNG-NAF 241
Query: 161 ASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYLITGSDDFTVKVWD 217
A+ S D T +++++ + T +H+ GI + F S ++ L+ G DDF VWD
Sbjct: 242 ATGSDDATCRLFDLRADQELMTY-SHDNIICGITSVS-FSKSGRL-LLAGYDDFNCNVWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 ALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 53/241 (21%), Positives = 100/241 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ T H + + + D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQTTTFTGHTGDVMSLS--LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG--LERVWSIGYKKGSNQVAFGCD 293
A+CF P T S+D T +++ + T S + + S+ + K + G D
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290
Query: 294 N 294
+
Sbjct: 291 D 291
Score = 147 (56.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D T +WD ET GHT
Sbjct: 128 TREGNVRVSRELAGHTGYLSCCRFL---DDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R+ ++ + D + +W+ + T + + +I + N A G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 220 (82.5 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 65/267 (24%), Positives = 115/267 (43%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GH+ V
Sbjct: 130 EGNVRVSRELAGHTGYL-SCCRFLDDNQIVTSSGDTTCALWDIETGQQTT-TFTGHTGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D F S + D + ++W++ + T HE IN I +F + TG
Sbjct: 188 MSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA--FATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + H N +T+V F R+++ +D +W+A
Sbjct: 245 SDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 198 (74.8 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVTDSPVRTAKFVA--R---EHWIVCGSDDKFIRVFDYNTMASVKEFEAH 100
Y+ +T E +V+V+ +++ R ++ IV S D ++D T F H
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 101 EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTF 160
+ SL++ P ++ + D KLWD + C QTF GH + F P N F
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNG-NAF 241
Query: 161 ASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYLITGSDDFTVKVWD 217
A+ S D T +++++ + T +H+ GI + F S ++ L+ G DDF VWD
Sbjct: 242 ATGSDDATCRLFDLRADQELMTY-SHDNIICGITSVS-FSKSGRL-LLAGYDDFNCNVWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 ALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 53/241 (21%), Positives = 100/241 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ T H + + + D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQTTTFTGHTGDVMSLS--LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG--LERVWSIGYKKGSNQVAFGCD 293
A+CF P T S+D T +++ + T S + + S+ + K + G D
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290
Query: 294 N 294
+
Sbjct: 291 D 291
Score = 147 (56.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D T +WD ET GHT
Sbjct: 128 TREGNVRVSRELAGHTGYLSCCRFL---DDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R+ ++ + D + +W+ + T + + +I + N A G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 220 (82.5 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 65/267 (24%), Positives = 115/267 (43%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GH+ V
Sbjct: 130 EGNVRVSRELAGHTGYL-SCCRFLDDNQIVTSSGDTTCALWDIETGQQTT-TFTGHTGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D F S + D + ++W++ + T HE IN I +F + TG
Sbjct: 188 MSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA--FATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + H N +T+V F R+++ +D +W+A
Sbjct: 245 SDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 198 (74.8 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVTDSPVRTAKFVA--R---EHWIVCGSDDKFIRVFDYNTMASVKEFEAH 100
Y+ +T E +V+V+ +++ R ++ IV S D ++D T F H
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 101 EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTF 160
+ SL++ P ++ + D KLWD + C QTF GH + F P N F
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNG-NAF 241
Query: 161 ASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYLITGSDDFTVKVWD 217
A+ S D T +++++ + T +H+ GI + F S ++ L+ G DDF VWD
Sbjct: 242 ATGSDDATCRLFDLRADQELMTY-SHDNIICGITSVS-FSKSGRL-LLAGYDDFNCNVWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 ALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 53/241 (21%), Positives = 100/241 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ T H + + + D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQTTTFTGHTGDVMSLS--LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG--LERVWSIGYKKGSNQVAFGCD 293
A+CF P T S+D T +++ + T S + + S+ + K + G D
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290
Query: 294 N 294
+
Sbjct: 291 D 291
Score = 147 (56.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D T +WD ET GHT
Sbjct: 128 TREGNVRVSRELAGHTGYLSCCRFL---DDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R+ ++ + D + +W+ + T + + +I + N A G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 220 (82.5 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 65/267 (24%), Positives = 115/267 (43%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GH+ V
Sbjct: 130 EGNVRVSRELAGHTGYL-SCCRFLDDNQIVTSSGDTTCALWDIETGQQTT-TFTGHTGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D F S + D + ++W++ + T HE IN I +F + TG
Sbjct: 188 MSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA--FATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + H N +T+V F R+++ +D +W+A
Sbjct: 245 SDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 198 (74.8 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVTDSPVRTAKFVA--R---EHWIVCGSDDKFIRVFDYNTMASVKEFEAH 100
Y+ +T E +V+V+ +++ R ++ IV S D ++D T F H
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 101 EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTF 160
+ SL++ P ++ + D KLWD + C QTF GH + F P N F
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNG-NAF 241
Query: 161 ASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYLITGSDDFTVKVWD 217
A+ S D T +++++ + T +H+ GI + F S ++ L+ G DDF VWD
Sbjct: 242 ATGSDDATCRLFDLRADQELMTY-SHDNIICGITSVS-FSKSGRL-LLAGYDDFNCNVWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 ALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 53/241 (21%), Positives = 100/241 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ T H + + + D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQTTTFTGHTGDVMSLS--LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG--LERVWSIGYKKGSNQVAFGCD 293
A+CF P T S+D T +++ + T S + + S+ + K + G D
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290
Query: 294 N 294
+
Sbjct: 291 D 291
Score = 147 (56.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D T +WD ET GHT
Sbjct: 128 TREGNVRVSRELAGHTGYLSCCRFL---DDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R+ ++ + D + +W+ + T + + +I + N A G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 220 (82.5 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 65/267 (24%), Positives = 115/267 (43%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D +++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GH+ V
Sbjct: 130 EGNVRVSRELAGHTGYL-SCCRFLDDNQIVTSSGDTTCALWDIETGQQTT-TFTGHTGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D F S + D + ++W++ + T HE IN I +F + TG
Sbjct: 188 MSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA--FATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + H N +T+V F R+++ +D +W+A
Sbjct: 245 SDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 198 (74.8 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 46 YHSQTTEKSVKVTDSPVRTAKFVA--R---EHWIVCGSDDKFIRVFDYNTMASVKEFEAH 100
Y+ +T E +V+V+ +++ R ++ IV S D ++D T F H
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 101 EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTF 160
+ SL++ P ++ + D KLWD + C QTF GH + F P N F
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNG-NAF 241
Query: 161 ASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYLITGSDDFTVKVWD 217
A+ S D T +++++ + T +H+ GI + F S ++ L+ G DDF VWD
Sbjct: 242 ATGSDDATCRLFDLRADQELMTY-SHDNIICGITSVS-FSKSGRL-LLAGYDDFNCNVWD 298
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
+L GH N V+ + + + T S D + IWN
Sbjct: 299 ALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 174 (66.3 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 53/241 (21%), Positives = 100/241 (41%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + +++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ T H + + + D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQTTTFTGHTGDVMSLS--LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG--LERVWSIGYKKGSNQVAFGCD 293
A+CF P T S+D T +++ + T S + + S+ + K + G D
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290
Query: 294 N 294
+
Sbjct: 291 D 291
Score = 147 (56.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+N+
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D T +WD ET GHT
Sbjct: 128 TREGNVRVSRELAGHTGYLSCCRFL---DDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R+ ++ + D + +W+ + T + + +I + N A G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 220 (82.5 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 64/267 (23%), Positives = 114/267 (42%)
Query: 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91
++++ G + IW+ ++ ++ + S V T + +++ CG D ++ T
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKTR 129
Query: 92 -ASVK---EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
+V+ E H Y+ S ++T+S D LWD E + T TF GH+ V
Sbjct: 130 EGNVRVSRELAGHTGYL-SCCRFLDDNQIVTSSGDTTCALWDIETGQQTT-TFAGHTGDV 187
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITG 207
M + P D F S + D + ++W++ + T HE IN I +F + TG
Sbjct: 188 MSLSLAP-DTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNA--FATG 244
Query: 208 SDDFTVKVWDYETKTCVQILEGHTN---NVTAVCFHPELRIIITASEDGTILIWNATTFR 264
SDD T +++D + + H N +T+V F R+++ +D +W+
Sbjct: 245 SDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKAD 303
Query: 265 LQNTLSSGLERVWSIGYKKGSNQVAFG 291
L+ RV +G VA G
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 194 (73.4 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 55/191 (28%), Positives = 85/191 (44%)
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
++ IV S D ++D T F H + SL++ P ++ + D KLWD
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDI 213
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM--DSSAAKFTLDAHEK 188
+ C QTF GH + F P N FA+ S D T +++++ D ++ D
Sbjct: 214 REGM-CRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQELMVYSHDNIIC 271
Query: 189 GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
GI + F S ++ L+ G DDF VWD +L GH N V+ + + + T
Sbjct: 272 GITSVA-FSKSGRL-LLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVAT 329
Query: 249 ASEDGTILIWN 259
S D + IWN
Sbjct: 330 GSWDSFLKIWN 340
Score = 169 (64.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 47/204 (23%), Positives = 86/204 (42%)
Query: 65 AKFVAREHW------IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
AK A HW +V S D + ++D T V ++ + A P+ +V
Sbjct: 56 AKIYAM-HWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 119 ASDDKLIKLWDW---EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
D + ++ E N ++ GH+ Y+ F D N ++S D T +W+++
Sbjct: 115 GGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIE 172
Query: 176 SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235
+ T H + + + D ++G+ D + K+WD C Q GH +++
Sbjct: 173 TGQQTTTFAGHTGDVMSLS--LAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDIN 230
Query: 236 AVCFHPELRIIITASEDGTILIWN 259
A+CF P T S+D T +++
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFD 254
Score = 141 (54.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 44/185 (23%), Positives = 75/185 (40%)
Query: 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD 175
V + D KLI +WD S +VM A+ P N A LD I+++
Sbjct: 71 VSASQDGKLI-IWD-SYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYSLK 127
Query: 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231
+ L H ++C + D ++T S D T +WD ET GHT
Sbjct: 128 TREGNVRVSRELAGHTGYLSCCRFL---DDNQIVTSSGDTTCALWDIETGQQTTTFAGHT 184
Query: 232 NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFG 291
+V ++ P+ R+ ++ + D + +W+ + T + + +I + N A G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 292 CDNGT 296
D+ T
Sbjct: 245 SDDAT 249
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 216 (81.1 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 59/256 (23%), Positives = 116/256 (45%)
Query: 41 VCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD--DKFIRVFDYNTMASVKEFE 98
V +W + + E + + ++ + S D IR++D T +K +
Sbjct: 44 VKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMD 103
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
A ++A P ++ T S + ++ E + + + +++ A++P D
Sbjct: 104 AGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKK-EHSLDTRGKFILSIAYSP-DGK 161
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
AS ++DG I I+++ + TL+ H I + + + D L+T SDD +K++D
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLVTASDDGYIKIYDV 219
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWS 278
+ L GH + V +V F P+ +++S D +I +W+ ++ NT ++VWS
Sbjct: 220 QHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWS 279
Query: 279 IGYKK-GSNQVAFGCD 293
+ Y GS V+ G D
Sbjct: 280 VKYNPTGSKIVSAGDD 295
Score = 209 (78.6 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 22 SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDK 81
+V F P ++ + G V I+ S E S+ + + + ++ G+ D
Sbjct: 111 TVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 82 FIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE 141
I +FD T + E H IRSL P ++TASDD IK++D + + T
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGTLS 229
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH +V+ AF+P D + F S+S D +I++W+ S + T H+ + + Y T K
Sbjct: 230 GHGSWVLSVAFSPDDTH-FVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSK 288
Query: 202 VYLITGSDDFTVKVWD 217
+ ++ DD + ++D
Sbjct: 289 I--VSAGDDRAIHIYD 302
Score = 199 (75.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 63/240 (26%), Positives = 111/240 (46%)
Query: 74 IVCGSDDKFIRVFDYNTMASVKEF--EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
IV GS D ++V+ ++ ++ E H+ + S+ + ++S D I+LWD E
Sbjct: 35 IVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLE 94
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
+ G AF+P D A+ S G + I+ ++S + +LD K I
Sbjct: 95 TGKQIKSMDAGPVD-AWTVAFSP-DSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFIL 152
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASE 251
I Y + D YL +G+ D + ++D T + LEGH + ++ F P+ ++++TAS+
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 252 DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
DG I I++ L TLS V S+ + F + +K+ ++S VN
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTH--FVSSSSDKSIKVWDTSSRSCVN 268
Score = 144 (55.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 36/154 (23%), Positives = 67/154 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ S+ + P ++ + G + I++ + +++ P+R+ F +V SD
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D +I+++D H ++ S+A P +++S DK IK+WD C T
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSR-SCVNT 269
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173
F H V +NP + SA D I I++
Sbjct: 270 FFDHQDQVWSVKYNPTG-SKIVSAGDDRAIHIYD 302
Score = 131 (51.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 35/160 (21%), Positives = 76/160 (47%)
Query: 143 HSHYVMQSAF--NPKD-LNTFASASLDGTIQIWNMDSSAAK--FTLDAHEKGINCIDYFI 197
H + +A+ + KD T + SLD +++W + +TL+ H+ G+ ++ I
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVN--I 72
Query: 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
+ + + S D +++WD ET ++ ++ + V F P+ + I T S G + I
Sbjct: 73 SQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNI 132
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
+ + + +++L + + + SI Y +A G +G +
Sbjct: 133 FGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 225 (84.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 50/199 (25%), Positives = 100/199 (50%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV + +F+A ++ S+D IR +D + + ++ H + L + P + + S
Sbjct: 362 PVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGS 421
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D+ +LW +++ + + + GH V F+P N A+ S D T+++W+ +
Sbjct: 422 HDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHPNS-NYLATGSTDKTVRLWSAQQGNSV 479
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H + + F + K YL + +D +K+WD + T + L GHT+N+T++ F
Sbjct: 480 RLFTGHRGPVLSLA-FSPNGK-YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 537
Query: 241 PELRIIITASEDGTILIWN 259
P+ +I +AS D ++ +W+
Sbjct: 538 PDSSLIASASMDNSVRVWD 556
Score = 165 (63.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 39/165 (23%), Positives = 74/165 (44%)
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+ GS D+ R++ ++ ++ + H + + HP ++ T S DK ++LW ++
Sbjct: 416 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 475
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ F GH V+ AF+P ASA D +++W++ S L H I
Sbjct: 476 G-NSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 533
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
+ + + D + + S D +V+VWD C +G + + V
Sbjct: 534 LTF--SPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGV 576
Score = 162 (62.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V +D P + + + T +W++ + + V KF +++ GS
Sbjct: 405 VWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 464
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK +R++ SV+ F H + SLA P ++ +A +D+ +KLWD +
Sbjct: 465 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG-TLYKE 523
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
GH+ + F+P D + ASAS+D ++++W++
Sbjct: 524 LRGHTDNITSLTFSP-DSSLIASASMDNSVRVWDI 557
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/204 (25%), Positives = 88/204 (43%)
Query: 58 TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHE-DYIRSLAVHPTFPFV 116
T+ + TA+ + G D+ I+++ + +K E H+ D R +H +
Sbjct: 285 TEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK-KLKS-EPHQVDVSR---IHLACD-I 338
Query: 117 LTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS 176
L DD+ D E + GH V + F D + S S D +I+ W++ S
Sbjct: 339 LEEEDDE-----DDNAGTEM-KILRGHCGPVYSTRFLA-DSSGLLSCSEDMSIRYWDLGS 391
Query: 177 SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTA 236
H + +D I+ +Y +GS D T ++W ++ ++I GH +V
Sbjct: 392 FTNTVLYQGHAYPVWDLD--ISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 449
Query: 237 VCFHPELRIIITASEDGTILIWNA 260
V FHP + T S D T+ +W+A
Sbjct: 450 VKFHPNSNYLATGSTDKTVRLWSA 473
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 30/125 (24%), Positives = 54/125 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++ TV +W+ + + PV + F ++ +
Sbjct: 447 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 506
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ ++++D + KE H D I SL P + +AS D +++WD +N C+
Sbjct: 507 DQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI-RNTYCSTP 565
Query: 140 FEGHS 144
+G S
Sbjct: 566 ADGSS 570
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 213 (80.0 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 60/232 (25%), Positives = 115/232 (49%)
Query: 74 IVCGSDDKFIRVFDY-NTMASVK-EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
+V GS D ++V+ + + ++ E H+ + S+ + T P ++S D I+LWD E
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN 191
N + ++ + AF+P D A+ + G + I+ ++S +++LD K I
Sbjct: 95 -NGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 192 CIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASE 251
I Y + D YL +G+ D + ++D T + LEGH + ++ F P+ ++++TAS+
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 252 DGTILIWNATTFRLQNTLSSGLERVWSIGY-KKGSNQVAFGCDNGTLIVKIG 302
DG I I++ L TLS V ++ + ++ V+ D + +G
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Score = 195 (73.7 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 51/213 (23%), Positives = 99/213 (46%)
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D IR++D +K +A +LA P ++ T + + ++ E + +
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-EYS 143
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
+ +++ A++P D AS ++DG I I+++ + TL+ H I + + +
Sbjct: 144 LDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SP 200
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D L+T SDD +K++D + L GH + V V F P+ +++S D ++ +W+
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 260 ATTFRLQNTLSSGLERVWSIGYK-KGSNQVAFG 291
T +T ++VW + Y GS V+ G
Sbjct: 261 VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 293
Score = 191 (72.3 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 57/236 (24%), Positives = 101/236 (42%)
Query: 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRT 64
L+LQ E Q V SVD T P +S + +W+ + KS+ T
Sbjct: 54 LDLQWSLEGHQLG--VVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT 111
Query: 65 AKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
F ++ G+ + +F + + +I S+A P ++ + + D +
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
I ++D + T EGH+ + F+P D +AS DG I+I+++ + TL
Sbjct: 172 INIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLS 229
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H + ++ D + ++ S D +VKVWD T+TCV H + V V ++
Sbjct: 230 GHASWV--LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN 283
Score = 187 (70.9 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 56/208 (26%), Positives = 95/208 (45%)
Query: 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLA----SLY--SGT----VCIWNYHSQTTEKS 54
L+ I ++ ++KS+D P W LA S Y +GT V I+ S E S
Sbjct: 84 LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 55 VKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFP 114
+ + + + ++ G+ D I +FD T + E H IRSL P
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 115 FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
++TASDD IK++D + + T GH+ +V+ AF P D + F S+S D ++++W++
Sbjct: 204 LLVTASDDGYIKIYDVQ-HANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDV 261
Query: 175 DSSAAKFTLDAHEKGINCIDYFITSDKV 202
+ T H+ + + Y K+
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGNGSKI 289
Score = 162 (62.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 50/206 (24%), Positives = 98/206 (47%)
Query: 95 KEFEAHEDYIRSLA----VHPTFPFVLTASDDKLIKLWDW-EKNWECTQTFEGHSHYVMQ 149
K+ +AH+D I S+A V+T S D L+K+W W ++ + + EGH V+
Sbjct: 10 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVS 69
Query: 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209
+ L AS+SLD I++W++++ ++DA ++ + D YL TG+
Sbjct: 70 VDIS-HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGP--VDAWTLAFSPDSQYLATGTH 126
Query: 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
V ++ E+ L+ + ++ + P+ + + + + DG I I++ T +L +TL
Sbjct: 127 VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 186
Query: 270 SSGLERVWSIGYKKGSNQVAFGCDNG 295
+ S+ + S + D+G
Sbjct: 187 EGHAMPIRSLTFSPDSQLLVTASDDG 212
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 219 (82.2 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 61/223 (27%), Positives = 106/223 (47%)
Query: 89 NTMASVKEFEAHEDY-IRSLAVHPTFPFVLTASDDKLIKLWDWE-KNWEC-TQTFEGHSH 145
+T+A +++F AH D +A +P + + D+ I++W E +WEC T +GH
Sbjct: 3 DTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQR 62
Query: 146 YVMQSAFNPKDLNTFASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVY 203
V + A++P N ASAS D T IW D L+ HE + C+ + + +
Sbjct: 63 TVRKVAWSPCG-NYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGN--L 119
Query: 204 LITGSDDFTVKVWDYETKT---CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNA 260
L T S D +V +W+ + + CV ++ HT +V V +HP ++ + S D + ++
Sbjct: 120 LATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKE 179
Query: 261 TT--FRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301
+ + TL VW + + ++A D+ T VKI
Sbjct: 180 EDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDCT--VKI 220
Score = 161 (61.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 76 CGSDDKFIRVF----DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
CG D + IR++ D +V + + H+ +R +A P ++ +AS D +W +
Sbjct: 34 CGGD-RTIRIWGREGDSWECKTVLQ-DGHQRTVRKVAWSPCGNYLASASFDATTCIWK-K 90
Query: 132 KN--WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS---AAKFTLDAH 186
KN +EC EGH + V A+ P N A+ S D ++ IW +D +++H
Sbjct: 91 KNDDFECLTVLEGHENEVKCVAWAPSG-NLLATCSRDKSVWIWEVDEENEYECVSVVNSH 149
Query: 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT--CVQILEGHTNNVTAVCFHPELR 244
+ + + + T + L + S D V V+ E C LEGHT+ V + F P +
Sbjct: 150 TQDVKHVVWHPTQE--LLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQ 207
Query: 245 IIITASEDGTILIW 258
+ + S+D T+ IW
Sbjct: 208 RLASCSDDCTVKIW 221
Score = 140 (54.3 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 49/190 (25%), Positives = 79/190 (41%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE--- 96
T+ IW + E + D RT + VA W CG+ FD T K+
Sbjct: 39 TIRIWGREGDSWECKTVLQDGHQRTVRKVA---WSPCGNYLASAS-FDATTCIWKKKNDD 94
Query: 97 ------FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLW--DWEKNWECTQTFEGHSHYVM 148
E HE+ ++ +A P+ + T S DK + +W D E +EC H+ V
Sbjct: 95 FECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVK 154
Query: 149 QSAFNPKDLNTFASASLDGTIQIWNM--DSSAAKFTLDAHEKGINCIDYFITSDKVYLIT 206
++P AS S D + ++ D + TL+ H + + + + + L +
Sbjct: 155 HVVWHPTQ-ELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQR--LAS 211
Query: 207 GSDDFTVKVW 216
SDD TVK+W
Sbjct: 212 CSDDCTVKIW 221
Score = 138 (53.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 38/159 (23%), Positives = 72/159 (45%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTE--KSVKVTDSPVRTAKFVAREHWIVCG 77
V+ V + P ++ ++ + T CIW + E ++ ++ V+ + + +
Sbjct: 64 VRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATC 123
Query: 78 SDDKFIRVFDY---NTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN- 133
S DK + +++ N V +H ++ + HPT + + S D + ++ E +
Sbjct: 124 SRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDD 183
Query: 134 WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW 172
WEC T EGH+ V F+P AS S D T++IW
Sbjct: 184 WECRATLEGHTSTVWGLTFDPSG-QRLASCSDDCTVKIW 221
Score = 80 (33.2 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 39/180 (21%), Positives = 70/180 (38%)
Query: 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA---REHWI 74
+ VK V + P+ + +V IW + + V V +S + K V + +
Sbjct: 106 NEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELL 165
Query: 75 VCGSDDKFIRVF-----DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
S D + V+ D+ A++ E H + L P+ + + SDD +K+W
Sbjct: 166 ASCSYDNNVCVYKEEDDDWECRATL---EGHTSTVWGLTFDPSGQRLASCSDDCTVKIWK 222
Query: 130 ----------WEKNWECTQTFEG-HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178
+ W+C T G H V A+ P A+A D ++++ D +A
Sbjct: 223 ECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLT-GALATACGDDGVRVFKEDETA 281
Score = 74 (31.1 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 228 EGHTNNVTAVCFHP-ELRIIITASEDGTILIWN 259
+ HT +V + +HP E ++++ S++G I +WN
Sbjct: 296 KAHTQDVNCIAWHPKEAGLLVSCSDNGEIAVWN 328
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 224 (83.9 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 50/199 (25%), Positives = 100/199 (50%)
Query: 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS 120
PV + +F+A ++ S+D IR +D + + ++ H + L + P + + S
Sbjct: 344 PVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGS 403
Query: 121 DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK 180
D+ +LW +++ + + + GH V F+P N A+ S D T+++W+ +
Sbjct: 404 HDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHPNS-NYLATGSTDKTVRLWSAQQGNSV 461
Query: 181 FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
H + + F + K YL + +D +K+WD + T + L GHT+N+T++ F
Sbjct: 462 RLFTGHRGPVLSLA-FSPNGK-YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 241 PELRIIITASEDGTILIWN 259
P+ +I +AS D ++ +W+
Sbjct: 520 PDSGLIASASMDNSVRVWD 538
Score = 165 (63.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 39/165 (23%), Positives = 75/165 (45%)
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+ GS D+ R++ ++ ++ + H + + HP ++ T S DK ++LW ++
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+ F GH V+ AF+P ASA D +++W++ S L H I
Sbjct: 458 G-NSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237
+ + + D + + S D +V+VWD C +G ++ + V
Sbjct: 516 LTF--SPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGV 558
Score = 161 (61.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 38/155 (24%), Positives = 72/155 (46%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V +D P + + + T +W++ + + V KF +++ GS
Sbjct: 387 VWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 446
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK +R++ SV+ F H + SLA P ++ +A +D+ +KLWD +
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG-TLYKE 505
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNM 174
GH+ + F+P D ASAS+D ++++W++
Sbjct: 506 LRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI 539
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/204 (25%), Positives = 88/204 (43%)
Query: 58 TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHE-DYIRSLAVHPTFPFV 116
T+ + TA+ + G D+ I+++ + +K E H+ D R +H +
Sbjct: 267 TEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK-KLKS-EPHQVDVSR---IHLACD-I 320
Query: 117 LTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS 176
L DD+ D E + GH V + F D + S S D +I+ W++ S
Sbjct: 321 LEEEDDE-----DDNAGTEM-KILRGHCGPVYSTRFLA-DSSGLLSCSEDMSIRYWDLGS 373
Query: 177 SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTA 236
H + +D I+ +Y +GS D T ++W ++ ++I GH +V
Sbjct: 374 FTNTVLYQGHAYPVWDLD--ISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 431
Query: 237 VCFHPELRIIITASEDGTILIWNA 260
V FHP + T S D T+ +W+A
Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSA 455
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 30/125 (24%), Positives = 54/125 (43%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++ TV +W+ + + PV + F ++ +
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 488
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ ++++D + KE H D I SL P + +AS D +++WD +N C+
Sbjct: 489 DQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI-RNTYCSAP 547
Query: 140 FEGHS 144
+G S
Sbjct: 548 ADGSS 552
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 224 (83.9 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 65/264 (24%), Positives = 118/264 (44%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
++SV F P ++ + +W+ ++T + + + F I GS
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSG 408
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW--ECT 137
D+ +R++D ++ F ED + ++A+ P +V S DK +++WD + E
Sbjct: 409 DRTVRLWDIENGTALTVFTI-EDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERL 467
Query: 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF- 196
+ +GH V AF+P + + SLD TI++W + + + KG C+ F
Sbjct: 468 EGPDGHKDSVYSVAFSPNGRD-LVTGSLDKTIKLWELATPRGNMQ-NQGSKGGRCVKTFE 525
Query: 197 ----------ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRII 246
+T D ++++GS D V+ WD T + +L+GH N+V +V P
Sbjct: 526 GHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFF 585
Query: 247 ITASEDGTILIWNATTFRLQNTLS 270
T S D IW+ T R+ N ++
Sbjct: 586 ATGSGDMRARIWSYT--RMDNRMA 607
Score = 192 (72.6 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 63/237 (26%), Positives = 106/237 (44%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLT 118
D +R+ F ++ G++DK IRV+D T +F HE I SL + +
Sbjct: 346 DLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIAS 405
Query: 119 ASDDKLIKLWDWEKNWECTQ-TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177
S D+ ++LWD E T T E V A +P D A+ SLD ++++W++
Sbjct: 406 GSGDRTVRLWDIENGTALTVFTIEDG---VTTVAISP-DTKYVAAGSLDKSVRVWDLTQG 461
Query: 178 AAKFTL---DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT------------ 222
L D H+ + + + + + L+TGS D T+K+W+ T
Sbjct: 462 CPVERLEGPDGHKDSVYSVAF--SPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGR 519
Query: 223 CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
CV+ EGH + V +V P+ + +++ S+D + W+ T Q L V S+
Sbjct: 520 CVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISV 576
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 47/180 (26%), Positives = 81/180 (45%)
Query: 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS---PVRTAKFVAREHWI 74
D V +V P +V A +V +W+ + ++ D V + F +
Sbjct: 430 DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDL 489
Query: 75 VCGSDDKFIRVFDYNT----MAS--------VKEFEAHEDYIRSLAVHPTFPFVLTASDD 122
V GS DK I++++ T M + VK FE H D++ S+A+ P +V++ S D
Sbjct: 490 VTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKD 549
Query: 123 KLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN---MDSSAA 179
+ ++ WD + +GH + V+ A +P FA+ S D +IW+ MD+ A
Sbjct: 550 RGVQFWD-PRTGSTQLMLQGHKNSVISVAPSPTG-GFFATGSGDMRARIWSYTRMDNRMA 607
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 62/225 (27%), Positives = 107/225 (47%)
Query: 40 TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC-GSDDKFIRVFDYNTMASVKEFE 98
TVC+W+ + K +K S V + R + C GSDD ++++D ASV F+
Sbjct: 122 TVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ 181
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
+ + S+ + T +++ D IK+WD +N + + +GH V + + D +
Sbjct: 182 -NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQN-KLIYSMQGHGDSVTGLSLSA-DGS 238
Query: 159 TFASASLDGTIQIWNMDSSAAK------FTLDAHEKGINCIDYFITSDKVYLITGSDDFT 212
S S+D ++++W++ A K F + H N + ++D + GS D
Sbjct: 239 YLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRF 298
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
V +WD T+ V L GH +V V FHPE I+++ S D + I
Sbjct: 299 VYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
Score = 218 (81.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 61/251 (24%), Positives = 111/251 (44%)
Query: 25 FHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83
FHP + +S Y + +WN + ++K V + + S DK +
Sbjct: 64 FHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTV 123
Query: 84 RVFDYNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFEG 142
V+D T VK + H ++ S P T SDD +KLWD K TF+
Sbjct: 124 CVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKK-ASVHTFQ- 181
Query: 143 HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV 202
+++ V+ FN + S +D I++W++ + +++ H + + +++D
Sbjct: 182 NTYQVLSVTFNDTS-DQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLS--LSADGS 238
Query: 203 YLITGSDDFTVKVWDYET----KTCVQILEGHTNN----VTAVCFHPELRIIITASEDGT 254
YL++ S D +V+VWD + CV+I +G+ +N + + + I S D
Sbjct: 239 YLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRF 298
Query: 255 ILIWNATTFRL 265
+ IW+ TT R+
Sbjct: 299 VYIWDTTTRRI 309
Score = 179 (68.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 54/208 (25%), Positives = 90/208 (43%)
Query: 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151
A + HE + HP + ++ D+LI +W+ + E T +GHS VM+
Sbjct: 47 APIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELH 106
Query: 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF 211
+N D + SAS D T+ +W+ ++ L H +N + TGSDD
Sbjct: 107 YNT-DGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSC-FPARRGPQLACTGSDDG 164
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
TVK+WD K V + +T V +V F+ II+ D I +W+ +L ++
Sbjct: 165 TVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQG 223
Query: 272 GLERVWSIGYKK-GSNQVAFGCDNGTLI 298
+ V + GS ++ DN +
Sbjct: 224 HGDSVTGLSLSADGSYLLSNSMDNSVRV 251
Score = 172 (65.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/207 (22%), Positives = 96/207 (46%)
Query: 59 DSPVRTAKFVAREHWIVCGSDDKFIRVFD-YNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117
+ V KF + D+ I +++ Y + + H + L + +
Sbjct: 56 EGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLF 115
Query: 118 TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFA-SASLDGTIQIWNMDS 176
+AS DK + +WD E E + +GH+ +V S F + A + S DGT+++W++
Sbjct: 116 SASTDKTVCVWDSETG-ERVKRLKGHTSFV-NSCFPARRGPQLACTGSDDGTVKLWDIRK 173
Query: 177 SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTA 236
A+ T + ++ + + TSD++ I+G D +KVWD + ++GH ++VT
Sbjct: 174 KASVHTFQNTYQVLS-VTFNDTSDQI--ISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTG 230
Query: 237 VCFHPELRIIITASEDGTILIWNATTF 263
+ + +++ S D ++ +W+ F
Sbjct: 231 LSLSADGSYLLSNSMDNSVRVWDIRPF 257
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 226 (84.6 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 62/194 (31%), Positives = 103/194 (53%)
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEA-HEDYIRSLAVHPTFPFVLTASDDKLIK 126
VA E ++ S DK I+V+D +T +K FE H YI++LA+ + F + +D++I
Sbjct: 961 VANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLF--SGGNDQIIY 1018
Query: 127 LWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAH 186
+WD E +GH +V+ L F S S D I+IW++ + + TL H
Sbjct: 1019 VWDTE-TLSMLFNMQGHEDWVLSLHCTASYL--F-STSKDNVIKIWDLSNFSCIDTLKGH 1074
Query: 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL-EGHTNNVTAVC-FHPELR 244
N + + D+ YL +GS+D ++KVWD +T CV + + H+ V + F+ +
Sbjct: 1075 W---NSVSSCVVKDR-YLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQ-- 1128
Query: 245 IIITASEDGTILIW 258
II+A+ DG+I +W
Sbjct: 1129 -IISAAFDGSIKVW 1141
Score = 221 (82.9 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 53/195 (27%), Positives = 105/195 (53%)
Query: 29 QPWVLASLYSGTVCIWNYHSQTTEKSVK-VTDSPVRTAKFVAREHWIVCGSDDKFIRVFD 87
+ ++ + Y T+ +W+ + KS + V ++T R ++ G +D+ I V+D
Sbjct: 964 EKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGR--YLFSGGNDQIIYVWD 1021
Query: 88 YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV 147
T++ + + HED++ SL H T ++ + S D +IK+WD N+ C T +GH + V
Sbjct: 1022 TETLSMLFNMQGHEDWVLSL--HCTASYLFSTSKDNVIKIWDLS-NFSCIDTLKGHWNSV 1078
Query: 148 MQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHEKGINCIDYFITSDKVYLIT 206
S+ KD + S S D +I++W++D+ +T+ +H G+ C+ F +I+
Sbjct: 1079 --SSCVVKDRYLY-SGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQ----IIS 1131
Query: 207 GSDDFTVKVWDYETK 221
+ D ++KVW++++K
Sbjct: 1132 AAFDGSIKVWEWQSK 1146
Score = 207 (77.9 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 64/257 (24%), Positives = 121/257 (47%)
Query: 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA-REHWIVC 76
+RV S+ F Q + A GT +++ + K + + ++ + +A ++I
Sbjct: 870 ERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNW--KCLYTVNGHRKSIESIACNSNYIFT 927
Query: 77 GSDDKFIRVF---DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN 133
S D I+V NT ++ H + + + + F + S DK IK+WD
Sbjct: 928 SSPDNTIKVHIIRSGNTKC-IETLVGHTGEVNCVVANEKYLF--SCSYDKTIKVWDLSTF 984
Query: 134 WECTQTFEG-HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
E ++FEG H+ Y+ A + + L F+ + D I +W+ ++ + F + HE +
Sbjct: 985 KEI-KSFEGVHTKYIKTLALSGRYL--FSGGN-DQIIYVWDTETLSMLFNMQGHEDWV-- 1038
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252
+ T+ YL + S D +K+WD +C+ L+GH N+V++ C + R + + SED
Sbjct: 1039 LSLHCTAS--YLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSS-CVVKD-RYLYSGSED 1094
Query: 253 GTILIWNATTFRLQNTL 269
+I +W+ T T+
Sbjct: 1095 NSIKVWDLDTLECVYTI 1111
Score = 165 (63.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 86 FDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH 145
F + V ++ + + S+A + D +++D NW+C T GH
Sbjct: 854 FSKKDLKCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRK 913
Query: 146 YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF--TLDAHEKGINCIDYFITSDKVY 203
+ A N N ++S D TI++ + S K TL H +NC+ + ++K Y
Sbjct: 914 SIESIACNS---NYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCV---VANEK-Y 966
Query: 204 LITGSDDFTVKVWDYETKTCVQILEG-HTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
L + S D T+KVWD T ++ EG HT + + R + + D I +W+ T
Sbjct: 967 LFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSG--RYLFSGGNDQIIYVWDTET 1024
Query: 263 FRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSV 310
+ + + V S+ + S + DN I + N S D++
Sbjct: 1025 LSMLFNMQGHEDWVLSL-HCTASYLFSTSKDNVIKIWDLSNFSCIDTL 1071
WARNING: HSPs involving 1313 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 312 312 0.00080 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1563
No. of states in DFA: 618 (66 KB)
Total size of DFA: 261 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.38u 0.16s 25.54t Elapsed: 00:00:01
Total cpu time: 25.50u 0.17s 25.67t Elapsed: 00:00:01
Start: Sat May 11 05:03:33 2013 End: Sat May 11 05:03:34 2013
WARNINGS ISSUED: 2