BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047355
(312 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2
SV=1
Length = 926
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 207/299 (69%), Positives = 249/299 (83%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L+I+++ Q+S+RVKSVD HPT+PW+LASLYSGT+CIWNY +Q KS +VT+ PVR
Sbjct: 2 PLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+AKFVAR+ W+V G+DD +IRV++YNTM VK FEAH DYIR +AVHPT P+VL++SDD
Sbjct: 62 SAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDWEK W CTQ FEGHSHYVMQ FNPKD NTFASASLD TI+IWN+ S FTL
Sbjct: 122 LIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
DAH+KG+NC+DYF DK YLITGSDD T KVWDY+TK+CVQ LEGHT+NV+AVCFHPEL
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302
IIIT SEDGT+ IW+ATT+RL+NTL+ GLERVW+IGY K S +V G D GT++VK+G
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG 300
>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2
SV=1
Length = 909
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 206/299 (68%), Positives = 248/299 (82%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++F Q+S+RVKSVD HPT+PW+LASLYSGTVCIWNY +QT KS +VT+ PVR
Sbjct: 2 PLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+AKF+ R+ W+V G+DD +IRV++YNTM VK FEAH DYIR +AVHPT P+VL++SDD
Sbjct: 62 SAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDWE W CTQ FEGHSHYVMQ FNPKD NTFASASLD TI+IWN+ S FTL
Sbjct: 122 LIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
DAH+KG+NC+DYF DK YLITGSDD T KVWDY+TK+CVQ L+GHT+NV+AVCFHPEL
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302
IIIT SEDGT+ IW+ATT+RL+NTL+ GLERVW+IGY K S +V G D GT++VK+G
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG 300
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 206/300 (68%), Positives = 249/300 (83%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L+I+++F Q+S+RVKSVD HPT+PW+LASLYSGT+CIWNY +QT KS VT+ PVR
Sbjct: 2 PLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+AKF+AR+ W+V G+DD FIRV++YNTM +K FEAH DYIR +AVHPT P+VL++SDD
Sbjct: 62 SAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDWEK W CTQ FEGHSHYVMQ FNPKD NTFASASLD TI+IWN+ S FTL
Sbjct: 122 LIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
DAH KG+NC+DYF DK YLITGSDD T KVWDY+TK+CVQ LEGHT+NV+AV FHPEL
Sbjct: 182 DAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+ATT+RL+NTL+ GLERVW+IG+ KGS +V G D G+++VK+G
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLGR 301
>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
GN=Os06g0143900 PE=2 SV=1
Length = 907
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 198/308 (64%), Positives = 253/308 (82%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L+I+++F Q+S+RVKSVD HPT+PW+L+SLYSG+VCIW+Y SQT KS +V++ PVR
Sbjct: 2 PLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+AKF++R+ W+V G+DD FIRV++YNTM VK FEAH DYIR +AVHPT P+VL++SDD
Sbjct: 62 SAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W CTQ FEGHSHYVMQ FNPKD NTFASASLD T +IW++ S FTL
Sbjct: 122 LIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTTKIWSLGSPDPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
D H+KG+NC+DYF D+ YLITGSDD T KVWDY+TK+CVQ LEGHT+N++AVCFHPEL
Sbjct: 182 DGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW++TT+RL+NTL+ GLERVW++GY KGS ++ G D GT+++K+G
Sbjct: 242 PIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EVPVASMD 309
>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica
GN=Os02g0209100 PE=2 SV=1
Length = 910
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 198/308 (64%), Positives = 249/308 (80%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ Q+S+RVKSVD HPT+PW+L+SLYSG+VCIWNY +QT KS +VT+ PVR
Sbjct: 2 PLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
++KF+AR+ WIV G+DD FIRV++YNTM VK FEAH DYIR +AVHPT PFVL++SDD
Sbjct: 62 SSKFIARKQWIVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W CTQ FEGHSHYVMQ FNPKD NTFASASLD T+++W++ S FTL
Sbjct: 122 LIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKVWSLGSPDPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
D H KG+NC+DYF D+ YLITGSDD T KVWDY+TK+CVQ LEGH +NV+AVCFHPEL
Sbjct: 182 DGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
I +T SEDGT+ +W++TT+RL+NTL+ GLERVW++GY KGS +V G D GT+++KIG
Sbjct: 242 PITLTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EVPVASMD 309
>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica
GN=Os02g0209000 PE=3 SV=2
Length = 910
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 196/308 (63%), Positives = 248/308 (80%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ Q+S+R KSVD HPT+PW+L+SLYSG+VCIWNY +QT KS +VT+ PVR
Sbjct: 2 PLRLDIKRKLAQRSERAKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
++KF+ R+ W+V G+DD FIRV++YNTM VK FEAH DYIR +AVHPT PFVL++SDD
Sbjct: 62 SSKFITRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W CTQ FEGHSHYVMQ FNPKD NTFASASLD T+++W++ S FTL
Sbjct: 122 LIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKVWSLGSPDPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
D H KG+NC+DYF D+ YLITGSDD T KVWDY+TK+CVQ LEGH +NV+AVCFHPEL
Sbjct: 182 DGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
II+T SEDGT+ +W++TT+RL+NTL+ GLERVW++GY KGS +V G D GT+++KIG
Sbjct: 242 PIILTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EVPVASMD 309
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 240/309 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA GCD G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGCDEGSIIVKLGR 301
Query: 304 SSGCDSVNC 312
S++
Sbjct: 302 EEPAMSMDA 310
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 239/309 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVNC 312
S++
Sbjct: 302 EEPAMSMDA 310
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 239/309 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVNC 312
S++
Sbjct: 302 EEPAMSMDA 310
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 239/309 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVNC 312
S++
Sbjct: 302 EEPAMSMDA 310
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 239/309 (77%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVNC 312
S++
Sbjct: 302 EEPAMSMDA 310
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 185/309 (59%), Positives = 237/309 (76%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L I+++ SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR
Sbjct: 2 PLRLDIKRKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD
Sbjct: 62 AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLWDW+K W C+Q FEGH+HYVMQ NPKD N FASASLD TI++W + SS+ FTL
Sbjct: 122 LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NCIDY+ DK YLI+G+DD VK+WDY+ KTCVQ EGH NV+ FHPEL
Sbjct: 182 EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
IIIT SEDGT+ IW+++T+RL++TL+ G+ERVW + +GSN VA G D G++IVK+G
Sbjct: 242 PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR 301
Query: 304 SSGCDSVNC 312
S++
Sbjct: 302 EEPAMSMDA 310
>sp|O62621|COPB2_DROME Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2
SV=2
Length = 914
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 177/308 (57%), Positives = 232/308 (75%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL+L I++ +SDRVK VD HP +PW+L +LY+G V I NY +Q K +V D PVR
Sbjct: 2 PLKLDIKRRLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
+A+FVAR++WI+ GSDD IRVF+YNT+ V FEAH DY+R +AVHPT P VLT+SDD
Sbjct: 62 SARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
LIKLW+WEK W C + FEGH+HYVMQ FNPKD NTFASASLD T+++W + S+ A FTL
Sbjct: 122 LIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NC+DY+ DK YLI+G+DD VK+WDY+ KTCVQ LEGH N++AVCFHPEL
Sbjct: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
I++T SEDGT+ IW++ T+RL+ L+ G ERVW+I +G+N VA G D G++I+K+G
Sbjct: 242 PIVLTGSEDGTVRIWHSGTYRLETCLNYGFERVWTISSMRGTNNVALGYDEGSIIIKVGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAMSMD 309
>sp|Q20168|COPB2_CAEEL Probable coatomer subunit beta' OS=Caenorhabditis elegans
GN=F38E11.5 PE=3 SV=3
Length = 1000
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 232/308 (75%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVR 63
PL L ++++ + +SDRVK VD HP + W+LA+LY+G V IWNY +QT KS +V D PVR
Sbjct: 2 PLRLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVR 61
Query: 64 TAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123
AKFV R+ W+V GSDD IRVF+YNT+ V +FEAH DY+RSL VHPT P+V+++SDD
Sbjct: 62 AAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDM 121
Query: 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL 183
L+K+WDW+ W Q+FEGH+HYVMQ A NPKD NTFA+ASLD T+++W S+ FTL
Sbjct: 122 LVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTL 181
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+ HEKG+NC+DY+ +K Y+I+G+DD VK+WDY+ KTCVQ L+GH NV++VCFHPEL
Sbjct: 182 EGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPEL 241
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
+IIT SED T+ +W+A T+RL+ TL+ GLERVW I +KG+N +A G D G++ +K+G
Sbjct: 242 PLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANTIAIGYDEGSVTLKLGR 301
Query: 304 SSGCDSVN 311
S++
Sbjct: 302 EEPAVSMD 309
>sp|Q54YD8|COPB2_DICDI Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3
SV=1
Length = 1005
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 173/300 (57%), Positives = 237/300 (79%), Gaps = 1/300 (0%)
Query: 4 PLELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVT-DSPV 62
PL L I+K+ +SDRVKSVD HPT+PW+LASLY G V IWNY +Q KS +V+ ++PV
Sbjct: 2 PLRLDIKKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPV 61
Query: 63 RTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDD 122
RTA+F+A++ WIV GSDD +IRV++YNTM +K FEAH DYIR + VHPT P++L++SDD
Sbjct: 62 RTARFIAKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDD 121
Query: 123 KLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT 182
IKLWD+EK W TQ FEGHSHYVM A+NPKD N FA+ASLD T+++W+++S FT
Sbjct: 122 MFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFT 181
Query: 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
L+ HEKGIN ++YF +K YLI+G+DD VK+WDY++KTCVQ LEGH+NNV+ VC+HPE
Sbjct: 182 LEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPE 241
Query: 243 LRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302
L +I++ SEDGT+ +W+++T+RL+ TL+ G+ VWS+ + +GSN + G D+GT+++KIG
Sbjct: 242 LPLILSGSEDGTVKLWHSSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKIG 301
>sp|P41811|COPB2_YEAST Coatomer subunit beta' OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC27 PE=1 SV=1
Length = 889
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 166/302 (54%), Positives = 223/302 (73%), Gaps = 3/302 (0%)
Query: 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRT 64
++L I+K F +SDRVK +DFHPT+PWVL +LYSG V +WNY +Q +S++VT++PVR
Sbjct: 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA 60
Query: 65 AKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
KF+AR++WI+ GSDD IRVF+YNT V +FEAH DYIRS+AVHPT P+VL+ SDD
Sbjct: 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL- 183
+KLW+WE NW QTFEGH H+VM AFNPKD +TFAS LD T+++W++ S FTL
Sbjct: 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180
Query: 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
E+G+N +DY+ DK Y+IT SDD T+K+WDY+TK+CV LEGH +NV+ FHP L
Sbjct: 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIG-YKKG-SNQVAFGCDNGTLIVKI 301
III+ SEDGT+ IWN++T++++ TL+ GLER W I + G N +A G DNG ++ +
Sbjct: 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300
Query: 302 GN 303
GN
Sbjct: 301 GN 302
>sp|O42937|COPB2_SCHPO Probable coatomer subunit beta' OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec27 PE=3 SV=2
Length = 796
Score = 350 bits (897), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 155/298 (52%), Positives = 213/298 (71%)
Query: 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRT 64
+ L +++ + ++RVK+VDFHPT+PWV+AS Y+G V IWNY++QT +S + D P+R
Sbjct: 2 MRLDFQRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRA 61
Query: 65 AKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124
F+AR++W VCGSDD +RV++YNT V +FEAH DYIR+L VHPT PF+LT+SDD
Sbjct: 62 CAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMT 121
Query: 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
IK ++W+ +W+C QTFEGHS YVM A NPKD NTFAS+ LDGT+++W+ SS A FTL
Sbjct: 122 IKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQ 181
Query: 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244
AH++G+N ++Y+ DK YLIT DD +KVWDY+TK CV+ILEGHTNNV+ FH +
Sbjct: 182 AHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFP 241
Query: 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302
III+ SEDGT+ IW+ ++ L + + L+R W I K + V G DNG + +G
Sbjct: 242 IIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDNGLITFSLG 299
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 169/319 (52%), Gaps = 33/319 (10%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS+RVK + FHP +PW+LASL+SG + +W+Y T D PVR F A +
Sbjct: 4 KFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y T + H DYIR++ H +P++++ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS--------------- 176
C GH+HYVM ++F+PK+ + SASLD T+++W++ +
Sbjct: 124 SR-TCVAVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
Query: 177 ------------SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC- 223
+ K+ L+ H++G+N + T +++G+DD VK+W
Sbjct: 182 TQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLP--LIVSGADDRQVKLWRMNDTKAW 239
Query: 224 -VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
V L GH NNV+ V FH + II++ SED +I +W+AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAH 299
Query: 283 KGSNQVAFGCDNGTLIVKI 301
N +A G DNG ++ K+
Sbjct: 300 PEMNLLAAGHDNGMIVFKL 318
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 194 bits (494), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 169/319 (52%), Gaps = 33/319 (10%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS+RVK + FHP +PW+LASL+SG + +W+Y T D PVR F A +
Sbjct: 4 KFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y T + H DYIR++ H +P++++ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS--------------- 176
C GH+HYVM ++F+PK+ + SASLD T+++W++ +
Sbjct: 124 SR-TCVAVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
Query: 177 ------------SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC- 223
+ K+ L+ H++G+N + T +++G+DD VK+W
Sbjct: 182 TQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLP--LIVSGADDRQVKLWRMNDTKAW 239
Query: 224 -VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
V L GH NNV+ V FH + II++ SED +I IW+AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAH 299
Query: 283 KGSNQVAFGCDNGTLIVKI 301
N +A G D+G ++ K+
Sbjct: 300 PEMNLLAAGHDSGMIVFKL 318
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 168/319 (52%), Gaps = 33/319 (10%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS+RVK + FHP +PW+LASL+SG + +W+Y T D PVR F A +
Sbjct: 4 KFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y T + H DYIR++ H P++++ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHECPWIVSASDDQTIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS--------------- 176
C GH+HYVM ++F+PK+ + SASLD T+++W++ +
Sbjct: 124 SR-TCVAVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDISALRKKSVSPADDILRL 181
Query: 177 ------------SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC- 223
+ K+ L+ H++G+N + T +++G+DD VK+W
Sbjct: 182 TQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLP--LIVSGADDRQVKIWRMNDTKAW 239
Query: 224 -VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
V L GH NNV+ V FH + II++ SED +I IW+AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAH 299
Query: 283 KGSNQVAFGCDNGTLIVKI 301
N +A G D+G ++ K+
Sbjct: 300 PEMNLLAAGHDSGMIVFKL 318
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3
SV=1
Length = 1221
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 166/317 (52%), Gaps = 32/317 (10%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F K+ RVK + FHPT+PW+LASL+SG++ +++Y +T + + PVR F +
Sbjct: 4 KFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + + H+DYIRS+ H P+++++SDD +I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT--------- 182
C GH+HYVM + F+PKD + SASLD TI+IW++ K T
Sbjct: 124 SR-TCIAELNGHNHYVMSALFHPKD-DLVVSASLDQTIRIWDISGLKKKMTTVKPYREND 181
Query: 183 ------------------LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV 224
L+ H++G+N + T + Y+++ SDD VK+W V
Sbjct: 182 PMRLQDELFGTDISVRLSLEGHDRGVNWASFHPT--QPYIVSASDDHQVKLWRM-NDPIV 238
Query: 225 QILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284
GH NNV+ FHP +II+ SED TI +W+ + + +R W++
Sbjct: 239 DTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPN 298
Query: 285 SNQVAFGCDNGTLIVKI 301
N A G D+G ++ K+
Sbjct: 299 QNLFAAGHDSGMIVFKL 315
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 212 TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS 271
++ ++DY KT ++ + H V + FH + ++ +D I +WN R TL
Sbjct: 32 SIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQPLFVSGGDDYKIKVWNYKQRRCLFTLKG 91
Query: 272 GLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303
+ + S+ + + + + D+ ++++I N
Sbjct: 92 HKDYIRSVEFHREAPWIVSSSDD--MVIRIWN 121
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 191 bits (484), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 171/319 (53%), Gaps = 33/319 (10%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS+RVK + FHP +PW+LASL+SG + +W+Y T + PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y T + H DYIR++ H P++++ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS--------------- 176
C GH+HYVM ++F+PK+ + SASLD T+++W++ +
Sbjct: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALKKKSASPADDLMRF 181
Query: 177 ------------SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKT- 222
+ K+ L+ H++G+N + T +++G+DD VK+W ETK
Sbjct: 182 SQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLP--LIVSGADDRQVKLWRMNETKAW 239
Query: 223 CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
V L GH NNV++V FH + II++ SED +I +W+AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVH 299
Query: 283 KGSNQVAFGCDNGTLIVKI 301
N +A G DNG ++ K+
Sbjct: 300 PEINLLAAGHDNGMIVFKL 318
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
+++WDY T + + H V V FH + ++ +D I +WN T R TL
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGH 92
Query: 273 LERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSV 310
L+ + ++ + + + D+ T+ + S C SV
Sbjct: 93 LDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISV 130
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 171/319 (53%), Gaps = 33/319 (10%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS+RVK + FHP +PW+LASL+SG + +W+Y T + PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR++ H +P++++ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS--------------- 176
C GH+HYVM ++F+PK+ + SASLD T+++W++ +
Sbjct: 124 SR-TCVSVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDIMRL 181
Query: 177 ------------SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY-ETKT- 222
+ K+ L+ H++G+N + T +++G+DD VK+W ETK
Sbjct: 182 TQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLP--LIVSGADDRQVKLWRMNETKAW 239
Query: 223 CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282
V L GH NNV++V FH + II++ SED +I +W+AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVH 299
Query: 283 KGSNQVAFGCDNGTLIVKI 301
N +A G D+G ++ K+
Sbjct: 300 PEMNLLAAGHDSGMIVFKL 318
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 213 VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272
+++WDY T + + H V V FH + ++ +D I +WN R TL
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGH 92
Query: 273 LERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSV 310
L+ + ++ + + D+ T+ + S C SV
Sbjct: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSV 130
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 177 bits (449), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 161/322 (50%), Gaps = 38/322 (11%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK----FTLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV----------------------YLITGSDDFTVKVWD------YE 219
+GI +D F T+D V +++G+DD VK+W +E
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE 241
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
TC GH NNV+ FHP +I++ SED +I +W+ + T +R W +
Sbjct: 242 VDTC----RGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVL 297
Query: 280 GYKKGSNQVAFGCDNGTLIVKI 301
N A G D G ++ K+
Sbjct: 298 AAHPNLNLFAAGHDGGMIVFKL 319
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 177 bits (449), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 161/322 (50%), Gaps = 38/322 (11%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK----FTLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV----------------------YLITGSDDFTVKVWD------YE 219
+GI +D F T+D V +++G+DD VK+W +E
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE 241
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
TC GH NNV+ FHP +I++ SED +I +W+ + T +R W +
Sbjct: 242 VDTC----RGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVL 297
Query: 280 GYKKGSNQVAFGCDNGTLIVKI 301
N A G D G ++ K+
Sbjct: 298 AAHPNLNLFAAGHDGGMIVFKL 319
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 161/322 (50%), Gaps = 38/322 (11%)
Query: 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVARE 71
+F KS RVK + FHP +PW+L SL++G + +W+Y T D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131
V G DD I+V++Y + H DYIR+ H +P++L+ASDD+ I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK----FTLDAHE 187
C GH+HYVM + F+P + + SASLD T+++W++ K +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPTE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 188 KGINCIDYFITSDKV----------------------YLITGSDDFTVKVWD------YE 219
+GI +D F T+D V +++G+DD VK+W +E
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE 241
Query: 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSI 279
TC GH NNV+ FHP +I++ SED +I +W+ + T +R W +
Sbjct: 242 VDTC----RGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVL 297
Query: 280 GYKKGSNQVAFGCDNGTLIVKI 301
N A G D G ++ K+
Sbjct: 298 AAHPNLNLFAAGHDGGMIVFKL 319
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 162/344 (47%), Gaps = 47/344 (13%)
Query: 7 LQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAK 66
+++ +F +S R K V FHPTQPW+L SL++G + +W+Y T D PVR
Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIA 60
Query: 67 FVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIK 126
F + V G DD + V++Y + + H DY+R H +P++L+ SDD+ I+
Sbjct: 61 FHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIR 120
Query: 127 LWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS---------- 176
+W+W+ C GHSHYVM +AF+P + + SASLD T+++W++
Sbjct: 121 IWNWQSR-NCIAILTGHSHYVMCAAFHPSE-DLIVSASLDQTVRVWDISGLRMKNAAPVS 178
Query: 177 -----------------------SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTV 213
+ KF L+ H++G+N + T +++ DD V
Sbjct: 179 MSLEDQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLP--LILSAGDDRLV 236
Query: 214 KVWD------YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267
K+W +E TC GH NNV+ FHP +I++ASED TI +W+
Sbjct: 237 KLWRMTASKAWEVDTC----RGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQ 292
Query: 268 TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSVN 311
T +R W I N A D+G ++ K+ ++N
Sbjct: 293 TFRRDNDRFWFITVHPKLNLFAAAHDSGVMVFKLERERPAHALN 336
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 161/337 (47%), Gaps = 44/337 (13%)
Query: 7 LQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAK 66
+++ +F KS R K + FHP++PWVL +L+S T+ +W+Y T + + PVR
Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD 60
Query: 67 FVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIK 126
F + V DD I+V+ +T + H DY+R++ H P++++ASDD+ I+
Sbjct: 61 FHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIR 120
Query: 127 LWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN------------- 173
+W+W+ E GH+H+VM + F+P D + SASLD TI+IW+
Sbjct: 121 IWNWQNRKEIA-CLTGHNHFVMCAQFHPTD-DLIVSASLDETIRIWDISGLRKRHSAPGT 178
Query: 174 -------------MDSS----AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
+D S KF L+ H +G+N + T +++GSDD VK+W
Sbjct: 179 SSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLP--LIVSGSDDRQVKLW 236
Query: 217 D------YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS 270
+E TC GHTNNV +V FHP +II+ ED T+ +W+
Sbjct: 237 RMSATKAWEVDTC----RGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFK 292
Query: 271 SGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
+R W I N D+G ++ K+ C
Sbjct: 293 RENDRFWLIAAHPHINLFGAAHDSGIMVFKLDRERPC 329
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 144/288 (50%), Gaps = 4/288 (1%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F V + T+ IW+ S T ++++ V + F + GSD
Sbjct: 844 VLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSD 903
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK I+++D + + E H ++S+A P V + SDD IK+WD + CTQT
Sbjct: 904 DKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWD-AASGTCTQT 962
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
EGH V+ AF+P D AS S D TI+IW+ S TL+ H + + + +
Sbjct: 963 LEGHGSSVLSVAFSP-DGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAF--SP 1019
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D + +GSDD T+K+WD + TC Q LEGH V +V F P+ + + + S+D TI IW+
Sbjct: 1020 DGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWD 1079
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
A + TL + VWS+ + +VA G +GT+ + S C
Sbjct: 1080 AVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTC 1127
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 143/286 (50%), Gaps = 4/286 (1%)
Query: 22 SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDK 81
SV F P + V + T+ IW+ S T ++++ V++ F + GSDD
Sbjct: 888 SVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDH 947
Query: 82 FIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE 141
I+++D + + E H + S+A P V + S DK IK+WD + CTQT E
Sbjct: 948 TIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWD-TASGTCTQTLE 1006
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH V AF+P D AS S D TI+IW+ S TL+ H + + + + D
Sbjct: 1007 GHGGSVWSVAFSP-DGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVF--SPDG 1063
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ +GSDD T+K+WD + TC Q LEGH ++V +V F P+ + + + S DGTI IW+A
Sbjct: 1064 QRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAA 1123
Query: 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
+ TL V S+ + +VA G +GT+ + S C
Sbjct: 1124 SGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTC 1169
Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 140/281 (49%), Gaps = 4/281 (1%)
Query: 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS 78
RV+SV F P V + T+ IW+ S T ++++ S V + F + GS
Sbjct: 927 RVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGS 986
Query: 79 DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
DK I+++D + + E H + S+A P V + SDDK IK+WD + CTQ
Sbjct: 987 GDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWD-TASGTCTQ 1045
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
T EGH +V F+P D AS S D TI+IW+ S TL+ H + + + +
Sbjct: 1046 TLEGHGGWVQSVVFSP-DGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAF--S 1102
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
D + +GS D T+K+WD + TC Q LEGH V +V F P+ + + + S DGTI IW
Sbjct: 1103 PDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIW 1162
Query: 259 NATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+A + TL V S+ + +VA G + T+ +
Sbjct: 1163 DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKI 1203
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 139/280 (49%), Gaps = 4/280 (1%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P V + T+ IW+ S T ++++ V + F + GSD
Sbjct: 970 VLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD 1029
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK I+++D + + E H +++S+ P V + SDD IK+WD + CTQT
Sbjct: 1030 DKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWD-AVSGTCTQT 1088
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
EGH V AF+P D AS S+DGTI+IW+ S TL+ H ++ + + +
Sbjct: 1089 LEGHGDSVWSVAFSP-DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAF--SP 1145
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D + +GS D T+K+WD + TC Q LEGH V +V F P+ + + + S D TI IW+
Sbjct: 1146 DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWD 1205
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ TL V S+ + +VA G + T+ +
Sbjct: 1206 TASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKI 1245
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 129/256 (50%), Gaps = 8/256 (3%)
Query: 44 WNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDY 103
WN +QT E S V + F A + GSDDK I+++D + + E H
Sbjct: 830 WNACTQTLEGH----GSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGS 885
Query: 104 IRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASA 163
+ S+A P V + SDDK IK+WD + CTQT EGH V AF+P D AS
Sbjct: 886 VWSVAFSPDRERVASGSDDKTIKIWD-AASGTCTQTLEGHGGRVQSVAFSP-DGQRVASG 943
Query: 164 SLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC 223
S D TI+IW+ S TL+ H G + + + D + +GS D T+K+WD + TC
Sbjct: 944 SDDHTIKIWDAASGTCTQTLEGH--GSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTC 1001
Query: 224 VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK 283
Q LEGH +V +V F P+ + + + S+D TI IW+ + TL V S+ +
Sbjct: 1002 TQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSP 1061
Query: 284 GSNQVAFGCDNGTLIV 299
+VA G D+ T+ +
Sbjct: 1062 DGQRVASGSDDHTIKI 1077
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 127/251 (50%), Gaps = 4/251 (1%)
Query: 22 SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDK 81
SV F P V + T+ IW+ S T ++++ V++ F + GSDD
Sbjct: 1014 SVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH 1073
Query: 82 FIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE 141
I+++D + + E H D + S+A P V + S D IK+WD + CTQT E
Sbjct: 1074 TIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWD-AASGTCTQTLE 1132
Query: 142 GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK 201
GH +V AF+P D AS S+DGTI+IW+ S TL+ H + + + + D
Sbjct: 1133 GHGGWVHSVAFSP-DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAF--SPDG 1189
Query: 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261
+ +GS D T+K+WD + TC Q LEGH V +V F P+ + + + S D TI IW+
Sbjct: 1190 QRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTA 1249
Query: 262 TFRLQNTLSSG 272
+ TL+ G
Sbjct: 1250 SGTCTQTLNVG 1260
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
D V SV F P V + GT+ IW+ S T ++++ V + F +
Sbjct: 1093 GDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVAS 1152
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
GS D I+++D + + E H +++S+A P V + S DK IK+WD + C
Sbjct: 1153 GSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWD-TASGTC 1211
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD 184
TQT EGH +V AF+P D AS S D TI+IW+ S TL+
Sbjct: 1212 TQTLEGHGGWVQSVAFSP-DGQRVASGSSDNTIKIWDTASGTCTQTLN 1258
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
TI + + +A TL+ H G + + ++D + +GSDD T+K+WD + T Q L
Sbjct: 822 TISVVEAEWNACTQTLEGH--GSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTL 879
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQ 287
EGH +V +V F P+ + + S+D TI IW+A + TL RV S+ + +
Sbjct: 880 EGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQR 939
Query: 288 VAFGCDNGTLIVKIGNSSGC 307
VA G D+ T+ + S C
Sbjct: 940 VASGSDDHTIKIWDAASGTC 959
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 18/296 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ V FHP ++++ T+ IW+Y + E+++K V+ F + + S
Sbjct: 109 ITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSA 168
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ T ++K H+ + S+ P F+++AS DK IK+W+ + C +T
Sbjct: 169 DMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGY-CVKT 227
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D + AS S D T+++W + + K L HE + CI + S
Sbjct: 228 FTGHREWVRTVRVN-QDGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECIAWAPES 286
Query: 200 ----------------DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243
+L++GS D T+K+WD T C+ L GH N V V +HP
Sbjct: 287 CNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGG 346
Query: 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ II+AS+D TI +W+ R Q TL + SI + + + V G + T+ V
Sbjct: 347 KYIISASDDKTIRVWDYKNKRCQKTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKV 402
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 20/266 (7%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ V F + + T+ +W++ + K++ D V + F+
Sbjct: 141 ERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMP 200
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+++ S DK I++++ T VK F H +++R++ V+ + + S+D+ +++W
Sbjct: 201 NGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWV 260
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-----------------FASASLDGTIQIW 172
N EC H H V A+ P+ N S S D TI++W
Sbjct: 261 -VANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMW 319
Query: 173 NMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTN 232
++ + TL H+ + + + Y+I+ SDD T++VWDY+ K C + LE H +
Sbjct: 320 DISTGVCIMTLVGHDNWVRGVVWHPGGK--YIISASDDKTIRVWDYKNKRCQKTLEAHQH 377
Query: 233 NVTAVCFHPELRIIITASEDGTILIW 258
T++ FH +IT S D T+ +W
Sbjct: 378 FCTSIDFHRSAPYVITGSVDQTVKVW 403
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H I + HP + +++AS+D IK+WD+E + +T +GH+ V +F+ +
Sbjct: 102 LSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETG-DFERTLKGHTDAVQDVSFDQQG 160
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ + T+ H+ ++ + + D +LI+ S D T+K+W
Sbjct: 161 -KLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGD--FLISASRDKTIKMW 217
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
+ T CV+ GH V V + + ++ + S D T+ +W
Sbjct: 218 ELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVW 259
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P +++++ T+ +W + K+ VRT + + S+
Sbjct: 193 VSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSN 252
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP------------------TFPFVLTASD 121
D+ +RV+ E HE + +A P + PF+L+ S
Sbjct: 253 DQTVRVWVVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSR 312
Query: 122 DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF 181
DK IK+WD C T GH ++V ++P SAS D TI++W+ + +
Sbjct: 313 DKTIKMWDISTG-VCIMTLVGHDNWVRGVVWHPGG-KYIISASDDKTIRVWDYKNKRCQK 370
Query: 182 TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AH+ ID+ ++ Y+ITGS D TVKVW+
Sbjct: 371 TLEAHQHFCTSIDFHRSAP--YVITGSVDQTVKVWE 404
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
+ GH + + F+P + SAS D TI+IW+ ++ + TL H + D
Sbjct: 101 SLSGHRSPITRVLFHPV-YSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQ--DVSFD 157
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
L + S D T+K+WD++T ++ + GH +NV++V F P +I+AS D TI +W
Sbjct: 158 QQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMW 217
Query: 259 NATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V ++ + + +A ++ T+ V + + C +
Sbjct: 218 ELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVANKECKA 268
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK +K+W+ + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 ------------------DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FHP
Sbjct: 289 AHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHP 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
R +++ ++D T+ IW+ R TLS+ V S+ + K S V G + T+ V
Sbjct: 349 GGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV 406
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 119/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F T + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK +++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + ++++ +DD T+++WDY+ K C++ L H
Sbjct: 322 MWDISTGMCLMTLVGHDNWVRGV--LFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAG-DFERTLKGHTDSVQDISFD-QT 161
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTMKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ T CV+ GH V V + + ++ + S D T+ +W T
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVAT 265
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + + S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLA-----VHPTF---------------PFVLTA 119
D+ +RV+ T E HE + ++ HPT PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+P + A D T++IW+ +
Sbjct: 315 SRDKTIKMWDISTGM-CLMTLVGHDNWVRGVLFHPGGRFVVSCAD-DKTLRIWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL AHE + +D+ S Y++TGS D TVKVW+
Sbjct: 373 MKTLSAHEHFVTSLDFHKASP--YVVTGSVDQTVKVWE 408
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286
L GH + VT V FHP ++++ASED TI +W+ + TL + V I + +
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 287 QVA 289
+A
Sbjct: 164 LLA 166
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 135/263 (51%), Gaps = 13/263 (4%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ V FHP +++ ++ +W+Y + E ++K V+ F ++ S
Sbjct: 125 ITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFLASCSA 184
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D ++++D+ +K H+ + S+A P+ F+++AS DK IK+W+ + CT+T
Sbjct: 185 DMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGY-CTKT 243
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI-- 197
F GH+ ++ +P+ N AS S D TI+IW+++S + L HE + CI +
Sbjct: 244 FIGHTEWIRSVRPSPEG-NLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHP 302
Query: 198 ---------TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248
+ + L++GS D T++ WD C+ +L GH N V + FHP R++++
Sbjct: 303 QNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQLVFHPHGRLLLS 362
Query: 249 ASEDGTILIWNATTFRLQNTLSS 271
AS+D TI +W+ R TL++
Sbjct: 363 ASDDKTIRVWDLKNRRCHKTLNA 385
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H I + HP + ++AS+D IK+WD+E E T +GH+ V AF+P
Sbjct: 120 GHRSPITRVLFHPHYNVFVSASEDASIKVWDYETG-EFEHTLKGHTDSVQDVAFDPSG-K 177
Query: 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218
AS S D +++W+ TL H+ ++ + + + D +L++ S D T+K+W+
Sbjct: 178 FLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGD--FLVSASRDKTIKMWEV 235
Query: 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269
T C + GHT + +V PE ++ + S D TI IW+ + Q L
Sbjct: 236 STGYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVL 286
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
T GH + + F+P N F SAS D +I++W+ ++ + TL H + + F
Sbjct: 117 TLTGHRSPITRVLFHPH-YNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDV-AFDP 174
Query: 199 SDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
S K +L + S D VK+WD+ C++ L GH +NV++V F P +++AS D TI +W
Sbjct: 175 SGK-FLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMW 233
Query: 259 NATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSV 310
+T T E + S+ N +A ++ T+ + S C V
Sbjct: 234 EVSTGYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVV 285
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 150/299 (50%), Gaps = 21/299 (7%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ V FHPT +L++ + IW++ + E+S+K S V+ F ++ + S
Sbjct: 111 ITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDSQGKLLASCSA 170
Query: 80 DKFIRVFDYN-TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ + VK H+ + S+A P +VL+AS D+ IK+W+ + C +
Sbjct: 171 DLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMWEVATGY-CVK 229
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF-- 196
T+ GH ++ + D N FAS S+D +I+IW+++S K L AH+ + CI +
Sbjct: 230 TYSGHREWIRMVRVH-MDGNIFASCSIDHSIRIWSINSRDCKAELRAHDHTVECIAWAPD 288
Query: 197 ITSDKV----------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
I++ + +L +GS D T++VWD C+ +L GH N V + FH
Sbjct: 289 ISTTHINEAAGSDNKKGHHQGPFLASGSRDKTIRVWDVGVGLCLFVLTGHDNWVRELTFH 348
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
P + +++AS+D TI +W+ R TL + S+ + K V G + T+ V
Sbjct: 349 PGGKYLVSASDDKTIRVWDLRNKRFMKTLYAHQHFCTSVDFHKKLPYVISGSVDNTVKV 407
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H I + HPT+ +L+AS+D +IK+WD+E E ++ +GH+ V AF+ +
Sbjct: 104 LSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFETG-EYERSLKGHTSSVQDIAFDSQG 162
Query: 157 LNTFASASLDGTIQIWNMDSSA-AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKV 215
AS S D +I++W+ S T+ H+ ++ + + D Y+++ S D T+K+
Sbjct: 163 -KLLASCSADLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGD--YVLSASRDQTIKM 219
Query: 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
W+ T CV+ GH + V H + I + S D +I IW+
Sbjct: 220 WEVATGYCVKTYSGHREWIRMVRVHMDGNIFASCSIDHSIRIWS 263
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 24/227 (10%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K + V SV F P +VL++ T+ +W + K+ +R +
Sbjct: 187 KTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMWEVATGYCVKTYSGHREWIRMVRVHMD 246
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTF----------------- 113
+ S D IR++ N+ E AH+ + +A P
Sbjct: 247 GNIFASCSIDHSIRIWSINSRDCKAELRAHDHTVECIAWAPDISTTHINEAAGSDNKKGH 306
Query: 114 ---PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQ 170
PF+ + S DK I++WD C GH ++V + F+P SAS D TI+
Sbjct: 307 HQGPFLASGSRDKTIRVWDVGVGL-CLFVLTGHDNWVRELTFHPGG-KYLVSASDDKTIR 364
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
+W++ + TL AH+ +D+ Y+I+GS D TVKVW+
Sbjct: 365 VWDLRNKRFMKTLYAHQHFCTSVDFH--KKLPYVISGSVDNTVKVWE 409
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGY 281
L GH ++T V FHP ++++ASED I IW+ T + +L V I +
Sbjct: 104 LSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAF 158
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ + ++ H+ + S+A+ P +++AS DK +K+W+ + C +T
Sbjct: 171 DMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + S K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPES 288
Query: 200 ------------------DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FHP
Sbjct: 289 AHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHP 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I+T ++D T+ IW+ R TL + V S+ + K + V G + T+ V
Sbjct: 349 GGKFIVTCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAAPYVVTGSVDQTVKV 406
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 122/268 (45%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F T + + T+ +W++ S +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDLTGKLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
I+ S DK +++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIISASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VASK-ECKAELREHEHVVECISWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + F K +++T +DD T+++WDY+ K C++ L H
Sbjct: 322 MWDVSTGMCLMTLVGHDNWVRGV-LFHPGGK-FIVTCADDKTLRIWDYKNKRCMKTLCAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKAAPYVVTGSVDQTVKVW 407
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDLTG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ S T+ H+ ++ + D ++I+ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGD--HIISASRDKTMKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
+ T CV+ GH V V + + +I + S D T+ +W
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H + I + +T
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTG 162
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
L + S D T+K+WD+++ C++ + GH +NV++V P II+AS D T+ +W
Sbjct: 163 K--LLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + S C +
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKA 270
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLA-----VHPTF---------------PFVLTA 119
D+ +RV+ + E HE + ++ HPT PF+L+
Sbjct: 255 DQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILDATSSESKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+P + + D T++IW+ +
Sbjct: 315 SRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHPGG-KFIVTCADDKTLRIWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL AHE + +D+ + Y++TGS D TVKVW+
Sbjct: 373 MKTLCAHEHFVTSLDFHKAAP--YVVTGSVDQTVKVWE 408
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++ + T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID----- 194
F GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 195 -YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
Y SD +L++GS D T+K+WD C+ L GH N V V FHP
Sbjct: 289 SYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHP 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D TI IW+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 118/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNP-------------------KDLNTFASASLDGTIQ 170
EC H H V ++ P K S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ TL H+ + + + ++++ +DD T+++WDY+ K C++ L H
Sbjct: 322 MWDISIGMCLMTLVGHDNWVRGVQFHPGGK--FILSCADDKTIRIWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F ++TAS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+P + A D TI+IW+ +
Sbjct: 315 SRDKTIKMWDISIGM-CLMTLVGHDNWVRGVQFHPGGKFILSCAD-DKTIRIWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + +AS D TI++W+ ++ + TL H + I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 162 GKL-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++ + T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCID----- 194
F GH +V N +D AS S D T+++W + + K L HE + CI
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 195 -YFITSDKV------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
Y SD +L++GS D T+K+WD C+ L GH N V V FHP
Sbjct: 289 SYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHP 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D TI IW+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 118/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNP-------------------KDLNTFASASLDGTIQ 170
EC H H V ++ P K S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ TL H+ + + + ++++ +DD T+++WDY+ K C++ L H
Sbjct: 322 MWDISIGMCLMTLVGHDNWVRGVQFHPGGK--FILSCADDKTIRIWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F ++TAS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+P + A D TI+IW+ +
Sbjct: 315 SRDKTIKMWDISIGM-CLMTLVGHDNWVRGVQFHPGGKFILSCAD-DKTIRIWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + +AS D TI++W+ ++ + TL H + I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 162 GKL-LASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 146/282 (51%), Gaps = 6/282 (2%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D V+ V F P + +S T+ +W+ +++K VR+ F A +
Sbjct: 768 TDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLAS 827
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
GS D+ I++++Y+T +K + H + + S+A P +++ S D+ IKLWD + + C
Sbjct: 828 GSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHI-C 886
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGIN-CIDY 195
+T GH++ V AF+P D T A SLD ++++WN + L A + +
Sbjct: 887 IKTLHGHTNEVCSVAFSP-DGQTLACVSLDQSVRLWNCRTGQC---LKAWYGNTDWALPV 942
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTI 255
+ D+ L +GS+D TVK+WD++T + LEGHT+ + + F P+ + + +AS D ++
Sbjct: 943 AFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSV 1002
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
+WN +T + L + V+++ + +A G + T+
Sbjct: 1003 RLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTV 1044
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 116/214 (54%), Gaps = 5/214 (2%)
Query: 76 CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE 135
CG+D+ ++++ +K HE + S+A HP + +AS DK IKLWD +
Sbjct: 702 CGADEN-VKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDG-T 759
Query: 136 CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDY 195
C QT GH+ +V AF+P D NT AS++ D TI++W++ TL +H + + +
Sbjct: 760 CLQTLTGHTDWVRCVAFSP-DGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAF 818
Query: 196 FITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTI 255
++D L +GS D T+K+W+Y T C++ GHTN+V ++ + P+ +I+++ S D TI
Sbjct: 819 --SADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTI 876
Query: 256 LIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVA 289
+W+ T TL V S+ + +A
Sbjct: 877 KLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLA 910
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 4/246 (1%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
S+ V+ V F P + + V +W+ K++ + V + F +
Sbjct: 684 SNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLAS 743
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
S DK I+++D ++ H D++R +A P + +++ D IKLWD + +C
Sbjct: 744 ASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQG-KC 802
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
+T + H+ +V AF+ D T AS S D TI+IWN + T H + I Y
Sbjct: 803 LRTLKSHTGWVRSVAFSA-DGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAY- 860
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+ D L++GS D T+K+WD +T C++ L GHTN V +V F P+ + + S D ++
Sbjct: 861 -SPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVR 919
Query: 257 IWNATT 262
+WN T
Sbjct: 920 LWNCRT 925
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 136/268 (50%), Gaps = 4/268 (1%)
Query: 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR 70
K +I ++ V S+ + P +++ T+ +W+ + K++ + V + F
Sbjct: 846 KTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPD 905
Query: 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130
+ C S D+ +R+++ T +K + + D+ +A P + + S+DK +KLWDW
Sbjct: 906 GQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDW 965
Query: 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGI 190
+ + + EGH+ ++ AF+P D T ASAS D ++++WN+ + L H +
Sbjct: 966 QTG-KYISSLEGHTDFIYGIAFSP-DSQTLASASTDSSVRLWNISTGQCFQILLEHTDWV 1023
Query: 191 NCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS 250
+ F K+ + TGS D TVK+W+ T C++ L H++ + + + P+ +++ +AS
Sbjct: 1024 YAV-VFHPQGKI-IATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASAS 1081
Query: 251 EDGTILIWNATTFRLQNTLSSGLERVWS 278
D ++ +W+ T R L RV+S
Sbjct: 1082 ADQSVRLWDCCTGRCVGILRGHSNRVYS 1109
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 4/294 (1%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
++ V SV F P + +V +WN + K+ F +
Sbjct: 894 TNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILAS 953
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
GS+DK ++++D+ T + E H D+I +A P + +AS D ++LW+ +C
Sbjct: 954 GSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTG-QC 1012
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
Q H+ +V F+P+ A+ S D T+++WN+ + TL H I + +
Sbjct: 1013 FQILLEHTDWVYAVVFHPQG-KIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAW- 1070
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+ D L + S D +V++WD T CV IL GH+N V + F P II T S D T+
Sbjct: 1071 -SPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVK 1129
Query: 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDSV 310
IW+ + TL+ V+ I + +A + T+ + N+ C +
Sbjct: 1130 IWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHI 1183
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 4/292 (1%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKF 67
Q K + +D V F P + + + TV +W++ + S++ + F
Sbjct: 927 QCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAF 986
Query: 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKL 127
+ S D +R+++ +T + H D++ ++ HP + T S D +KL
Sbjct: 987 SPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKL 1046
Query: 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187
W+ +C +T HS ++ A++P D ASAS D ++++W+ + L H
Sbjct: 1047 WNISTG-QCLKTLSEHSDKILGMAWSP-DGQLLASASADQSVRLWDCCTGRCVGILRGHS 1104
Query: 188 KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII 247
+ + + + T S D TVK+WD++ C++ L GHTN V + F P+ +I+
Sbjct: 1105 NRV--YSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILA 1162
Query: 248 TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+AS D T+ IW+ T + + V S+ + VA G + T+ +
Sbjct: 1163 SASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRI 1214
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 4/246 (1%)
Query: 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVC 76
+D + + F P + ++ +V +WN + + + V F + I
Sbjct: 978 TDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIAT 1037
Query: 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136
GS D +++++ +T +K H D I +A P + +AS D+ ++LWD C
Sbjct: 1038 GSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTG-RC 1096
Query: 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF 196
GHS+ V + F+P A+ S D T++IW+ TL H + D
Sbjct: 1097 VGILRGHSNRVYSAIFSPNG-EIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWV--FDIA 1153
Query: 197 ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256
+ D L + S D TV++WD T C I GHT+ V++V F P+ ++ + S+D T+
Sbjct: 1154 FSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVR 1213
Query: 257 IWNATT 262
IWN T
Sbjct: 1214 IWNVKT 1219
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 4/216 (1%)
Query: 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72
++ +D V +V FHP + TV +WN + K++ + +
Sbjct: 1016 LLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQ 1075
Query: 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132
+ S D+ +R++D T V H + + S P + T S D+ +K+WDW++
Sbjct: 1076 LLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ 1135
Query: 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC 192
+C +T GH+++V AF+P D ASAS D T++IW++++ H ++
Sbjct: 1136 G-KCLKTLTGHTNWVFDIAFSP-DGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSS 1193
Query: 193 IDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE 228
+ + + D + +GS D TV++W+ +T C+QIL
Sbjct: 1194 VAF--SPDGEVVASGSQDQTVRIWNVKTGECLQILR 1227
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 104 IRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASA 163
I S A P + T D +++W+ K+ + GHS++V F+P D AS
Sbjct: 645 ILSAAFSPEGQLLATCDTDCHVRVWE-VKSGKLLLICRGHSNWVRFVVFSP-DGEILASC 702
Query: 164 SLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC 223
D +++W++ TL HE + + + D L + S D T+K+WD + TC
Sbjct: 703 GADENVKLWSVRDGVCIKTLTGHEHEVFSVAFH--PDGETLASASGDKTIKLWDIQDGTC 760
Query: 224 VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK 283
+Q L GHT+ V V F P+ + +++ D TI +W+ + + TL S V S+ +
Sbjct: 761 LQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSA 820
Query: 284 GSNQVAFGCDNGTLIVKIGN 303
+A G +G +KI N
Sbjct: 821 DGQTLASG--SGDRTIKIWN 838
>sp|B4MY65|LIS1_DROWI Lissencephaly-1 homolog OS=Drosophila willistoni GN=Lis-1 PE=3 SV=1
Length = 409
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 143/299 (47%), Gaps = 21/299 (7%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ V FHP ++++ T+ IW++ + E+S+K V+ F A+ +V S
Sbjct: 109 ITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLVSCSA 168
Query: 80 DKFIRVFDYN-TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ + A VK H+ + S+A P +VL+AS D+ IK+W+ + C +
Sbjct: 169 DLSIKLWDFQQSYACVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGY-CVK 227
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
T+ GH +V + + + FA+ S D TI++W +S K L HE + CI +
Sbjct: 228 TYTGHREWVRMVRVHIEG-SLFATCSNDHTIRVWLTNSKDCKVELRDHEHTVECIAWAPE 286
Query: 199 SDKV------------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
+ +L +GS D T+++WD C+ L GH N V + FH
Sbjct: 287 AAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFH 346
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
P + +++AS+D TI +W+ R TL + SI + K V G + T+ V
Sbjct: 347 PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 405
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 23/271 (8%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYH-SQTTEKSVKVTDSPVRTAK 66
+ E+ +D V+ V F +++ ++ +W++ S K++ D V +
Sbjct: 139 EYERSLKGHTDSVQDVAFDAQGKLLVSCSADLSIKLWDFQQSYACVKTMHGHDHNVSSVA 198
Query: 67 FVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIK 126
FV +++ S D+ I++++ T VK + H +++R + VH T S+D I+
Sbjct: 199 FVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSLFATCSNDHTIR 258
Query: 127 LWDWEKNWECTQTFEGHSHYV----------------MQSAFNPKDLNT---FASASLDG 167
+W + +C H H V A N K + AS S D
Sbjct: 259 VW-LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDK 317
Query: 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227
TI+IW++ TL+ H+ + + + YL++ SDD T++VWD K C++ L
Sbjct: 318 TIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGK--YLVSASDDKTIRVWDLRNKRCMKTL 375
Query: 228 EGHTNNVTAVCFHPELRIIITASEDGTILIW 258
H + T++ FH +I+ S D T+ +W
Sbjct: 376 YAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 406
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H I + HP F +++AS+D IK+WD+E E ++ +GH+ V AF+ +
Sbjct: 104 GHRASITRVIFHPIFGLMVSASEDATIKIWDFETG-EYERSLKGHTDSVQDVAFDAQG-K 161
Query: 159 TFASASLDGTIQIWNMDSS-AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
S S D +I++W+ S A T+ H+ ++ + + D Y+++ S D T+K+W+
Sbjct: 162 LLVSCSADLSIKLWDFQQSYACVKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKMWE 219
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
T CV+ GH V V H E + T S D TI +W
Sbjct: 220 VATGYCVKTYTGHREWVRMVRVHIEGSLFATCSNDHTIRVW 260
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P +VL++ T+ +W + K+ VR + S+
Sbjct: 194 VSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSLFATCSN 253
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAV--------------------HPTFPFVLTA 119
D IRV+ N+ E HE + +A H PF+ +
Sbjct: 254 DHTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASG 313
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK I++WD C T GH ++V AF+P SAS D TI++W++ +
Sbjct: 314 SRDKTIRIWDVSVGL-CLLTLNGHDNWVRGLAFHPGG-KYLVSASDDKTIRVWDLRNKRC 371
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL AH+ ID+ Y+I+GS D TVKVW+
Sbjct: 372 MKTLYAHQHFCTSIDFHKAHP--YVISGSVDQTVKVWE 407
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
+ GH + + F+P SAS D TI+IW+ ++ + +L H + D
Sbjct: 101 SLTGHRASITRVIFHPI-FGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQ--DVAFD 157
Query: 199 SDKVYLITGSDDFTVKVWDYE-TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257
+ L++ S D ++K+WD++ + CV+ + GH +NV++V F P +++AS D TI +
Sbjct: 158 AQGKLLVSCSADLSIKLWDFQQSYACVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKM 217
Query: 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
W T T + E V + + A ++ T+ V + NS C
Sbjct: 218 WEVATGYCVKTYTGHREWVRMVRVHIEGSLFATCSNDHTIRVWLTNSKDC 267
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 140/278 (50%), Gaps = 4/278 (1%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F+P + + TV +W +S + + S V + F + GS
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSS 1262
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
DK +R++D ++ + F+ H +++ S+A +P + + S D+ ++LW+ + +C T
Sbjct: 1263 DKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSS-KCLHT 1321
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F+GH+ +V F+P D AS S D T+++W++ S +T H + + + +
Sbjct: 1322 FQGHTSWVSSVTFSP-DGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIF--SP 1378
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D L +GS D TV++W + C+ L+GH N V ++ F P+ ++ + S+D T+ +WN
Sbjct: 1379 DGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWN 1438
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
++ TL + V S+ + +A G D+ T+
Sbjct: 1439 ISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETI 1476
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 37/319 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V +V F P G V W + + K +S V + F + GSD
Sbjct: 867 VLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSD 926
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ +R++D ++ +K F+ H +RS+ P + + S D+ ++LWD EC
Sbjct: 927 DQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSG-ECLYI 985
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F+GH+ +V AFN D + A+ S D T+++W++ SS + H + + + +S
Sbjct: 986 FQGHTGWVYSVAFN-LDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVF--SS 1042
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D L +GSDD TV++WD + C+ L+GHT+ V +V F P+ ++ + +D + +W+
Sbjct: 1043 DGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWD 1102
Query: 260 ATT----FRLQN---------------TLSSG----LERVWSIGYKKG----------SN 286
++ + LQ TL++G + R+W I KK N
Sbjct: 1103 ISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVN 1162
Query: 287 QVAFGCDNGTLIVKIGNSS 305
VAF D TL G+ +
Sbjct: 1163 AVAFSPDGATLASGSGDQT 1181
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 138/278 (49%), Gaps = 4/278 (1%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V+SV F P + + V +W+ S +++ S VR F + GS
Sbjct: 1077 VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS 1136
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ +R++D ++ + + H +++ ++A P + + S D+ ++LWD + +C
Sbjct: 1137 DQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSS-KCLYI 1195
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
+GH+ +V FNP D +T AS S D T+++W ++SS T H +N + +
Sbjct: 1196 LQGHTSWVNSVVFNP-DGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVF--NP 1252
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D L +GS D TV++WD + C+ +GHTN V +V F+P+ ++ + S D T+ +W
Sbjct: 1253 DGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWE 1312
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
++ + +T V S+ + +A G D+ T+
Sbjct: 1313 ISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTV 1350
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 4/252 (1%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F+P + + TV +W+ S + + + V + F + GS
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSG 1304
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D+ +R+++ ++ + F+ H ++ S+ P + + SDD+ ++LW EC T
Sbjct: 1305 DQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSG-ECLYT 1363
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH+++V F+P D AS S D T+++W++ S +TL H + I + +
Sbjct: 1364 FLGHTNWVGSVIFSP-DGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVF--SP 1420
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
D L +GSDD TV++W+ + C+ L GH N+V +V F + I+ + S+D TI +W+
Sbjct: 1421 DGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWD 1480
Query: 260 ATTFRLQNTLSS 271
T TL S
Sbjct: 1481 VKTGECIKTLKS 1492
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 154/342 (45%), Gaps = 46/342 (13%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS------------------- 48
Q K F + RV+SV F P + + TV +W+ S
Sbjct: 939 QCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAF 998
Query: 49 ---------QTTEKSVKVTD--------------SPVRTAKFVAREHWIVCGSDDKFIRV 85
+ +++V++ D S VR+ F + + GSDD+ +R+
Sbjct: 999 NLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRL 1058
Query: 86 FDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH 145
+D ++ + + H +RS+ P + + DD++++LWD C T +G++
Sbjct: 1059 WDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSG-NCLYTLQGYTS 1117
Query: 146 YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLI 205
+V F+P + T A+ S D +++W++ S +TL H +N + + + D L
Sbjct: 1118 WVRFLVFSPNGV-TLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAF--SPDGATLA 1174
Query: 206 TGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL 265
+GS D TV++WD + C+ IL+GHT+ V +V F+P+ + + S D T+ +W + +
Sbjct: 1175 SGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKC 1234
Query: 266 QNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307
T V S+ + + +A G + T+ + +SS C
Sbjct: 1235 LCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKC 1276
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 118/222 (53%), Gaps = 4/222 (1%)
Query: 41 VCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAH 100
V +W+ S+ +++ + V F + GS D+ +R++D ++ + + H
Sbjct: 1140 VRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGH 1199
Query: 101 EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTF 160
++ S+ +P + + S D+ ++LW+ + +C TF+GH+ +V FNP D +
Sbjct: 1200 TSWVNSVVFNPDGSTLASGSSDQTVRLWEINSS-KCLCTFQGHTSWVNSVVFNP-DGSML 1257
Query: 161 ASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET 220
AS S D T+++W++ SS T H +N + + D L +GS D TV++W+ +
Sbjct: 1258 ASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAF--NPDGSMLASGSGDQTVRLWEISS 1315
Query: 221 KTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
C+ +GHT+ V++V F P+ ++ + S+D T+ +W+ ++
Sbjct: 1316 SKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISS 1357
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 19/235 (8%)
Query: 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDY---------IRSLAVHPTFPFVLTASDD 122
H ++ G+D F ++ V EA+ Y + ++A P T
Sbjct: 832 HTVIIGAD------FTNTSLRCVNFTEANLAYSVFTKILGSVLTVAFSPDGKLFATGDSG 885
Query: 123 KLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT 182
+++ W+ E T +GH+ +V F+ +D AS S D T+++W++ S T
Sbjct: 886 GIVRFWEAATGKELL-TCKGHNSWVNSVGFS-QDGKMLASGSDDQTVRLWDISSGQCLKT 943
Query: 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242
H + + + + + + L +GS D TV++WD + C+ I +GHT V +V F+ +
Sbjct: 944 FKGHTSRVRSVVF--SPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLD 1001
Query: 243 LRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTL 297
++ T S D T+ +W+ ++ + V S+ + +A G D+ T+
Sbjct: 1002 GSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTV 1056
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 D------------------KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + S ++++ +DD T++VWDY+ K C++ L H
Sbjct: 322 MWDVSTGMCLMTLVGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 162 GKL-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+ + A D T+++W+ +
Sbjct: 315 SRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 D------------------KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + S ++++ +DD T++VWDY+ K C++ L H
Sbjct: 322 MWDVSTGMCLMTLVGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 162 GKL-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+ + A D T+++W+ +
Sbjct: 315 SRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 D------------------KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + S ++++ +DD T++VWDY+ K C++ L H
Sbjct: 322 MWDVSTGMCLMTLVGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 162 GKL-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+ + A D T+++W+ +
Sbjct: 315 SRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Felis catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 D------------------KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + S ++++ +DD T++VWDY+ K C++ L H
Sbjct: 322 MWDVSTGMCLMTLVGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 162 GKL-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+ + A D T+++W+ +
Sbjct: 315 SRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 D------------------KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 289 SYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHS 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F T + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + S ++++ +DD T++VWD++ K C++ L H
Sbjct: 322 MWDISTGMCLMTLVGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHTG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H + I + T
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG 162
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 163 K--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+ + A D T+++W+ +
Sbjct: 315 SRDKTIKMWDISTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDFKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos
taurus GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 D------------------KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + S ++++ +DD T++VWDY+ K C++ L H
Sbjct: 322 MWDVSTGMCLMTLVGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVEDISFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDIS-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 162 GKL-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+ + A D T+++W+ +
Sbjct: 315 SRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K ++ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 D------------------KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 119/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D ++ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNP-------------------KDLNTFASASLDGTIQ 170
EC H H V ++ P K S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + S ++++ +DD T++VWDY+ K C++ L H
Sbjct: 322 MWDVSTGMCLMTLVGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ + F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSIQDIPFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H I I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIP-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 162 GKL-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+ + A D T+++W+ +
Sbjct: 315 SRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 D------------------KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGFVDQTVKV 406
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + S ++++ +DD T++VWDY+ K C++ L H
Sbjct: 322 MWDVSTGMCLMTLVGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGFVDQTVKVW 407
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 162 GKL-LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+ + A D T+++W+ +
Sbjct: 315 SRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TG D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGFVDQTVKVWE 408
>sp|B5X3C4|LIS1B_SALSA Lissencephaly-1 homolog B OS=Salmo salar GN=pafah1b1-2 PE=2 SV=1
Length = 410
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++ S T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYF--- 196
F GH +V N +D + AS S D T+++W S K L HE + CI +
Sbjct: 230 FTGHREWVRMVRPN-QDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDT 288
Query: 197 -------ITSDK--------VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
TS + +L++GS D T+K+WD T C+ L GH N V V HP
Sbjct: 289 AHPTILEATSSESKKNGKSGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHP 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
R I++ ++D T+ IW+ R TL + V S+ + + V G + T+ V
Sbjct: 349 GGRFIVSCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDMHQTAPYVVTGSVDQTVKV 406
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F T + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
IV S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYV-------------------MQSAFNPKDLNTFASASLDGTIQ 170
EC H H V +S N K S S D TI+
Sbjct: 263 ATSK-ECKAELREHEHVVECIAWAPDTAHPTILEATSSESKKNGKSGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + + ++++ +DD T+++WDY+ K C++ L H
Sbjct: 322 MWDISTGMCLMTLVGHDNWVRGV--LVHPGGRFIVSCADDKTLRIWDYKNKRCMKTLCAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ H ++T S D T+ +W
Sbjct: 380 EHFVTSLDMHQTAPYVVTGSVDQTVKVW 407
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F ++T+S+D IK+WD+E + +T +GH+ V +F+ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVTSSEDATIKVWDYEAG-DFERTLKGHTDSVQDISFD-QT 161
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
AS S D TI++W+ T+ H+ ++ + D ++++ S D T+K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ T CV+ GH V V + + +I + S D T+ +W AT+
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVATS 265
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + ++S D TI++W+ ++ + TL H + I + T
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
L + S D T+K+WD++ C++ + GH +NV++V P I++AS D TI +W
Sbjct: 163 K--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + + +A ++ T+ V + S C +
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVATSKECKA 270
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLA-----VHPTF---------------PFVLTA 119
D+ +RV+ + E HE + +A HPT PF+L+
Sbjct: 255 DQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSESKKNGKSGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V +P S + D T++IW+ +
Sbjct: 315 SRDKTIKMWDISTGM-CLMTLVGHDNWVRGVLVHPGG-RFIVSCADDKTLRIWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL AHE + +D T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLCAHEHFVTSLDMHQTAP--YVVTGSVDQTVKVWE 408
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V V FHP ++++ T+ +W+Y + E+++K V+ F + S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSA 170
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139
D I+++D+ ++ H+ + S+A+ P +++AS DK IK+W+ + + C +T
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGY-CVKT 229
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
F GH +V N +D AS S D T+++W + + K L HE + CI + S
Sbjct: 230 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 200 D------------------KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241
+L++GS D T+K+WD T C+ L GH N V V FH
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348
Query: 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
+ I++ ++D T+ +W+ R TL++ V S+ + K + V G + T+ V
Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA 69
E+ +D V+ + F + + + T+ +W++ +++ D V + +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129
+V S DK I++++ T VK F H +++R + + + + S+D+ +++W
Sbjct: 203 NGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNT-------------------FASASLDGTIQ 170
EC H H V ++ P+ + S S D TI+
Sbjct: 263 VATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230
+W++ + TL H+ + + S ++++ +DD T++VWDY+ K C++ L H
Sbjct: 322 MWDVSTGMCLMTLVGHDNWVRGV--LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379
Query: 231 TNNVTAVCFHPELRIIITASEDGTILIW 258
+ VT++ FH ++T S D T+ +W
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156
H + + HP F +++AS+D IK+WD+E + +T +GH+ V +F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSG 162
Query: 157 LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216
S S D TI++W+ T+ H+ ++ + D +L++ S D T+K+W
Sbjct: 163 -KLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HLVSASRDKTIKMW 219
Query: 217 DYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262
+ +T CV+ GH V V + + +I + S D T+ +W T
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 140 FEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS 199
GH V + F+P + SAS D TI++W+ ++ + TL H + I F S
Sbjct: 104 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDHS 161
Query: 200 DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWN 259
K+ L + S D T+K+WD++ C++ + GH +NV++V P +++AS D TI +W
Sbjct: 162 GKL-LTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWE 220
Query: 260 ATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGCDS 309
T T + E V + + +A ++ T+ V + + C +
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV P ++++ T+ +W + K+ VR + I S+
Sbjct: 195 VSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP--------------------TFPFVLTA 119
D+ +RV+ T E HE + ++ P PF+L+
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK IK+WD C T GH ++V F+ + A D T+++W+ +
Sbjct: 315 SRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRC 372
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL+AHE + +D+ T+ Y++TGS D TVKVW+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
>sp|Q291L9|LIS1_DROPS Lissencephaly-1 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=Lis-1 PE=3 SV=1
Length = 411
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 21/299 (7%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
+ V FHP ++++ T+ IW++ + E+S+K V+ F ++ + S
Sbjct: 111 ITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDSQGKLLASCSA 170
Query: 80 DKFIRVFDYN-TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138
D I+++D+ + VK H+ + S+A P +VL+AS D+ IK+W+ + C +
Sbjct: 171 DLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGY-CVK 229
Query: 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198
T+ GH +V + + + FA+ S D TI++W M+S K L HE + CI +
Sbjct: 230 TYTGHREWVRMVRVHIEG-SIFATCSNDHTIRVWLMNSKDCKVELRDHEHTVECIAWAPE 288
Query: 199 SDKV------------------YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240
+ +L +GS D T+++WD C+ L GH N V + FH
Sbjct: 289 AAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFH 348
Query: 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299
P + +++AS+D TI +W+ R TL + SI + K V G + T+ V
Sbjct: 349 PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 407
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSG-TVCIWNYH-SQTTEKSVKVTDSPVRTA 65
+ E+ +D V+ V F +Q +LAS + ++ +W++ S K++ D V +
Sbjct: 141 EYERSLKGHTDSVQDVAF-DSQGKLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSV 199
Query: 66 KFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLI 125
FV +++ S D+ I++++ T VK + H +++R + VH T S+D I
Sbjct: 200 AFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTI 259
Query: 126 KLWDWEKNWECTQTFEGHSHYV----------------MQSAFNPKDLNT---FASASLD 166
++W +C H H V A N K + AS S D
Sbjct: 260 RVWLMNSK-DCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRD 318
Query: 167 GTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQI 226
TI+IW++ TL+ H+ + + + YL++ SDD T++VWD K C++
Sbjct: 319 KTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGK--YLVSASDDKTIRVWDLRNKRCMKT 376
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
L H + T++ FH +I+ S D T+ +W
Sbjct: 377 LYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158
H I + HP F +++AS+D IK+WD+E E ++ +GH+ V AF+ +
Sbjct: 106 GHRASITRVIFHPIFGLMVSASEDATIKIWDFETG-EYERSLKGHTDSVQDVAFDSQG-K 163
Query: 159 TFASASLDGTIQIWNMDSS-AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
AS S D +I++W+ S T+ H+ ++ + + D Y+++ S D T+K+W+
Sbjct: 164 LLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKMWE 221
Query: 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258
T CV+ GH V V H E I T S D TI +W
Sbjct: 222 VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVW 262
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD 79
V SV F P +VL++ T+ +W + K+ VR + S+
Sbjct: 196 VSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSN 255
Query: 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAV--------------------HPTFPFVLTA 119
D IRV+ N+ E HE + +A H PF+ +
Sbjct: 256 DHTIRVWLMNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASG 315
Query: 120 SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179
S DK I++WD C T GH ++V AF+P SAS D TI++W++ +
Sbjct: 316 SRDKTIRIWDVSVGL-CLLTLNGHDNWVRGLAFHPGG-KYLVSASDDKTIRVWDLRNKRC 373
Query: 180 KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217
TL AH+ ID+ Y+I+GS D TVKVW+
Sbjct: 374 MKTLYAHQHFCTSIDFHKAHP--YVISGSVDQTVKVWE 409
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGY 281
L GH ++T V FHP ++++ASED TI IW+ T + +L + V + +
Sbjct: 104 LTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAF 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,736,949
Number of Sequences: 539616
Number of extensions: 4515003
Number of successful extensions: 28096
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 617
Number of HSP's that attempted gapping in prelim test: 10982
Number of HSP's gapped (non-prelim): 8589
length of query: 312
length of database: 191,569,459
effective HSP length: 117
effective length of query: 195
effective length of database: 128,434,387
effective search space: 25044705465
effective search space used: 25044705465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)